BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001337
(1097 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y4B4|ARIP4_HUMAN Helicase ARIP4 OS=Homo sapiens GN=RAD54L2 PE=1 SV=4
Length = 1467
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 237/627 (37%), Positives = 346/627 (55%), Gaps = 78/627 (12%)
Query: 538 DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 597
DA+ +VN+ EE V + ++ +K HQ+ GIRF+++N+++S+ + K+ G GC
Sbjct: 243 DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301
Query: 598 ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 648
ILAH+MGLGKT QVI+F+ R + +T L + PVN L NW EF W
Sbjct: 302 ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 359
Query: 649 --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 699
+P E++P +V +L D + RA+++A W ++GGV L+GY +R L+ K
Sbjct: 360 DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419
Query: 700 --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 738
+ + RE AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420 RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479
Query: 739 KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 798
K ++ +RR+ LTG PLQNNL+EY+CMVDFVR FLG+ EF N F+ PI NGQ +ST +
Sbjct: 480 KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539
Query: 799 DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 858
DV++M RSH+L+ L+GFVQR V+K LP K VI V+LS +QR LY +F+D
Sbjct: 540 DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598
Query: 859 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 909
D S+ + + + +IWNHP +L K + E D E+ S
Sbjct: 599 --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 656
Query: 910 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 953
E+ +GE + FLQG + F ++ +W DLL +
Sbjct: 657 CPPQGTKGKGEDSTLASSMGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 714
Query: 954 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LPRP----GKQGK 1007
L+ S KMVLL ++ +GDK LVFSQS+ TL LIE +L K +P P G+ +
Sbjct: 715 GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQ 774
Query: 1008 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1067
W + ++RLDG T + ER++L+ +FN+P N L+STRAG LG+NL ANRV++
Sbjct: 775 KWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 834
Query: 1068 DGSWNPTYDLQAIYRAWRCMDKQSQFL 1094
D SWNP +D QA+ R +R K+ ++
Sbjct: 835 DASWNPCHDAQAVCRVYRYGQKKPCYI 861
>sp|A4IHD2|ARIP4_XENTR Helicase ARIP4 OS=Xenopus tropicalis GN=rad54l2 PE=2 SV=1
Length = 1396
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 240/659 (36%), Positives = 354/659 (53%), Gaps = 101/659 (15%)
Query: 509 VQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITG------YIVNVVREKGEEAVRIPSSI 562
+Q S + N V DGD++ S + DA+ +VN+ E+ + + +
Sbjct: 208 LQISDNADSTNEV--DGDITTENSGSHVNDALNQADHLGRVLVNINHPPNEKDIFLAPQL 265
Query: 563 SAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSV 622
+ +K+HQ+ GIRF+++N+++S+ + SG G GCILAH+MGLGKT QVI+FL +
Sbjct: 266 ARAVKSHQIGGIRFLYDNLVESLERF-SGSSGFGCILAHSMGLGKTLQVISFLDVLFQHT 324
Query: 623 NLGLRTALIVTPVNVLHNWKQEFMKWRPS----------ELKPLRVFMLEDVSRDR---- 668
+ +T L + PVN L NW EF W P EL R F + ++ +
Sbjct: 325 SA--KTVLAIVPVNTLQNWLAEFNMWLPPPESLPKDHNQELVQPRAFKVHTMNDEHKTTA 382
Query: 669 -RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV-----------------------KDRNM 704
RA+++ W GGV L+GY +R LS K + + M
Sbjct: 383 ARAKVVNDWATDGGVLLMGYEMYRLLSLKKSFTAGRKKKSKKAAGPVIIDLDEEDRQQEM 442
Query: 705 AREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYC 763
+ I AL + GPD+++CDE H IKN A T+QALK ++ +RR+ LTG PLQNNL+EY+C
Sbjct: 443 LKGIEKALSRPGPDVVICDEGHRIKNCHASTSQALKNIRSRRRVVLTGYPLQNNLIEYWC 502
Query: 764 MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM 823
MVDFVR FLG+ EF N F+ PI NGQ +ST +D ++M RSH+L+ L+GFVQR
Sbjct: 503 MVDFVRPDFLGTRQEFSNMFERPILNGQCVDSTPQDKRLMRYRSHVLHSLLEGFVQRRGH 562
Query: 824 NVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQAL--- 880
V+K LP K VI V+LS +QR LY F++ + R + +G+ L
Sbjct: 563 TVLKAQLPFKEEHVILVRLSKIQRDLYTEFMN------------RFRDAGNSGWLGLNPL 610
Query: 881 ------AQIWNHPGILQLTKDKGYPSRE---DAEDSSSD------------ENMDYNVVI 919
+IWNHP +L K + E D ED ++ E ++
Sbjct: 611 KAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEDLGTNNRCNAQSGKIKVEPNSLGALM 670
Query: 920 GEKPRNMNDFLQG-------KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC 972
GE LQG + + +W ++L ++ +L S KMVLL ++
Sbjct: 671 GETAHTKQ--LQGIVLNPSHEKANQVVTYEWAKEILSDYIPGQLQNSPKMVLLFHLIEES 728
Query: 973 SNMGDKSLVFSQSIPTLDLIEFYLS--KLPRP----GKQGKLWKKGKDWYRLDGRTESSE 1026
MGDK LVFSQS+ TL ++E +L+ K+P P G++G W + ++YRLDG T +SE
Sbjct: 729 MRMGDKILVFSQSLSTLSIMEEFLAKRKMPIPAGSDGQEGHTWIRNVNYYRLDGSTSASE 788
Query: 1027 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1085
R++L+ +FN+P N++V L+STRAG LG+NL ANRV++ D SWNP +D QA+ R +R
Sbjct: 789 RERLINQFNDPSNEKVWLFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYR 847
>sp|Q99NG0|ARIP4_MOUSE Helicase ARIP4 OS=Mus musculus GN=Rad54l2 PE=1 SV=1
Length = 1466
Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust.
Identities = 239/630 (37%), Positives = 345/630 (54%), Gaps = 92/630 (14%)
Query: 538 DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 597
DA+ +VN+ EE V + ++ +K HQ+ GIRF+++N+++S+ + K+ G GC
Sbjct: 242 DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 300
Query: 598 ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 648
ILAH+MGLGKT QVI+F+ R + +T L + PVN L NW EF W
Sbjct: 301 ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 358
Query: 649 --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 699
+P E++P +V +L D + RA++ A W ++GGV L+GY +R L+ K +
Sbjct: 359 DSKPEEVQPRFFKVHILNDEHKTVASRAKVTADWVSEGGVLLMGYEMYRLLTLKKSLATS 418
Query: 700 --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 738
+ + RE AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 419 RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 478
Query: 739 KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 798
K ++ +RR+ LTG PLQNNL+EY+CMVDFVR FLG+ EF N F+ PI NGQ +ST +
Sbjct: 479 KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 538
Query: 799 DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 858
DV++M RSH+L+ L+GFVQR V+K LP K VI V+LS +QR LY +F+D
Sbjct: 539 DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSQIQRDLYTQFMD--- 595
Query: 859 FTNDRVSNEKIRKSFFAGYQAL---------AQIWNHPGILQLTKDKGYPSRE---DAED 906
+ R +G+ L +IWNHP +L K + E D E+
Sbjct: 596 ---------RFRDCGTSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEE 646
Query: 907 SSSDENMDYNVVIGEK--------PRNMND-----FLQGKNDDGFFQK-------DWWND 946
S G K P +M + FLQG + F ++ +W +
Sbjct: 647 LGSAGTSARCPPHGTKVKGEDSALPSSMGEATNSKFLQGVGFNPFQERGNNIVTYEWAKE 706
Query: 947 LLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPG 1003
LL + L+ S KMVLL ++ +GDK LVFSQS+ TL LIE +L K +P PG
Sbjct: 707 LLTNYQTGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDMPCLPG 766
Query: 1004 KQG---KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHS 1060
+G + W + ++RLDG T + ER++L+ +FN+P N L+STRAG LG+NL
Sbjct: 767 AEGQGTQKWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIG 826
Query: 1061 ANRVIIVDGSWNPTYDLQAIYRAWRCMDKQ 1090
ANRV++ D SWNP +D QA+ R +R K+
Sbjct: 827 ANRVVVFDASWNPCHDAQAVCRVYRYGQKK 856
>sp|Q9GQN5|ATRX_DROME Transcriptional regulator ATRX homolog OS=Drosophila melanogaster
GN=XNP PE=1 SV=2
Length = 1311
Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/682 (34%), Positives = 369/682 (54%), Gaps = 90/682 (13%)
Query: 470 KRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSA 529
++ ++K IR+I+ +L TK E +R++R++ Q KL N + + +
Sbjct: 376 QKNKRKHIRKIIKTKDLDLTTKEAAKEEDDRRKRIEDRQ-------KLYNRIFVKSE--- 425
Query: 530 GASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVK 589
S+E I +++ E + +++ + KLK HQV G++FMW+ +++++ +
Sbjct: 426 --SVE-----INELVLDFDEESKKALLQVDKGLLKKLKPHQVAGVKFMWDACFETLKESQ 478
Query: 590 SGDKGLGCILAHTMGLGKTFQVIAFLYTAM-RSVNLGLRTALIVTPVNVLHNWKQEFMKW 648
G GCILAH MGLGKT QV+ +T + + G+ LI++P++ ++NW +EF W
Sbjct: 479 E-KPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTGVDRVLIISPLSTVNNWAREFTSW 537
Query: 649 -RPSELKPLRVFMLEDVSRDR----RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN 703
+ + + V+ D+SR + R L +W +GGV ++GY +R L+ K R
Sbjct: 538 MKFANRNDIEVY---DISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRK 594
Query: 704 MARE-ICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEY 761
RE + AL D GPD++VCDE H++KN + ++A+ +++ +RRI LTG+PLQNNL EY
Sbjct: 595 KQREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREY 654
Query: 762 YCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRM 821
YCM+ FV+ LG+ E+ NRF NPI NGQ+T+ST D+++M RSHIL++ L+G +QR
Sbjct: 655 YCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRR 714
Query: 822 DMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS--FFAGYQA 879
D +V+ LPPK +V+ LS LQ++LY ++ H ++ + + K F +Q
Sbjct: 715 DYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTH---REQSGGDVVGKGARLFQDFQD 771
Query: 880 LAQIWNHPGILQLTKD---------------KGYPSREDAEDSSSDENMDY--------- 915
L +IW HP L++ D +G+ E ED ++ + D
Sbjct: 772 LRRIWTHPMNLRVNSDNVIAKRLLSNDDSDMEGFICDETDEDEAASNSSDSCETFKSDAS 831
Query: 916 --------NVVIGEKPRNMN----------DFLQGKNDDGFFQKD----WWNDLLHEHTY 953
V K RN N + L G QKD WW + E
Sbjct: 832 MSGLAASSGKVKKRKTRNGNAGGGDSDSDLEMLGGLGGGSSVQKDDPSEWWKPFVEEREL 891
Query: 954 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL----- 1008
+ +S K+++LL +L C +GDK LVFSQS+ +LD+IE +LS + K +
Sbjct: 892 NNVHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVG 951
Query: 1009 -----WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 1063
W GKD++RLDG +R+ + ++FN N R + LISTRAG LGINL +ANR
Sbjct: 952 DFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANR 1011
Query: 1064 VIIVDGSWNPTYDLQAIYRAWR 1085
V+I D SWNP++D Q+I+R +R
Sbjct: 1012 VVIFDVSWNPSHDTQSIFRVYR 1033
>sp|Q7YQM4|ATRX_PANTR Transcriptional regulator ATRX OS=Pan troglodytes GN=ATRX PE=2 SV=1
Length = 2492
Score = 320 bits (819), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)
Query: 541 TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 600
T +++ E E V++ ++ KLK HQV G++FMW+ +S++K K G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593
Query: 601 HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 658
H MGLGKT QV++FL+T + L TAL+V P+N NW EF KW+ + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653
Query: 659 FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 716
L V R + R+ +L +W+ GGV +IGY +RNL+ G++VK R + AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713
Query: 717 DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 776
D +VCDE H++KN + ++A+ ++ +RRI LTG+PLQNNL+EY+CMV+F++E LGS
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773
Query: 777 HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 836
EFRNRF NPI+NGQ +ST DV++M +R+HILYE L G VQR D + K LPPK +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833
Query: 837 VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 892
V+ V+++ +Q +LY+ +LD L G N+ K F +Q L++IW HP LQL
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893
Query: 893 --TKDKGY 898
++KGY
Sbjct: 1894 ISKENKGY 1901
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 100/154 (64%), Gaps = 10/154 (6%)
Query: 942 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1001
DW+ D + + + L++SGKMVLL +IL M +GDK LVFSQS+ +LDLIE +L R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059
Query: 1002 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1051
+ K W + D+YRLDG T + R+K E FN+ N R + +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119
Query: 1052 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1085
GSLGINL +ANRVII D SWNP+YD+Q+I+R +R
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYR 2153
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 335 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 389
CTAC ++ HP L V++CK+C +D+D + C WC +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230
Query: 390 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 431
C C FC C+ RN+ LS + + + W C C P L
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 273
>sp|P46100|ATRX_HUMAN Transcriptional regulator ATRX OS=Homo sapiens GN=ATRX PE=1 SV=5
Length = 2492
Score = 320 bits (819), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)
Query: 541 TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 600
T +++ E E V++ ++ KLK HQV G++FMW+ +S++K K G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593
Query: 601 HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 658
H MGLGKT QV++FL+T + L TAL+V P+N NW EF KW+ + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653
Query: 659 FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 716
L V R + R+ +L +W+ GGV +IGY +RNL+ G++VK R + AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713
Query: 717 DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 776
D +VCDE H++KN + ++A+ ++ +RRI LTG+PLQNNL+EY+CMV+F++E LGS
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773
Query: 777 HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 836
EFRNRF NPI+NGQ +ST DV++M +R+HILYE L G VQR D + K LPPK +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833
Query: 837 VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 892
V+ V+++ +Q +LY+ +LD L G N+ K F +Q L++IW HP LQL
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893
Query: 893 --TKDKGY 898
++KGY
Sbjct: 1894 ISKENKGY 1901
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 100/154 (64%), Gaps = 10/154 (6%)
Query: 942 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1001
DW+ D + + + L++SGKMVLL +IL M +GDK LVFSQS+ +LDLIE +L R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059
Query: 1002 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1051
+ K W + D+YRLDG T + R+K E FN+ N R + +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119
Query: 1052 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1085
GSLGINL +ANRVII D SWNP+YD+Q+I+R +R
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYR 2153
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 335 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 389
CTAC ++ HP L V++CK+C +D+D + C WC +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230
Query: 390 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 431
C C FC C+ RN+ LS + + + W C C P L
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 273
>sp|Q7YQM3|ATRX_PONPY Transcriptional regulator ATRX OS=Pongo pygmaeus GN=ATRX PE=2 SV=1
Length = 2492
Score = 320 bits (819), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)
Query: 541 TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 600
T +++ E E V++ ++ KLK HQV G++FMW+ +S++K K G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593
Query: 601 HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 658
H MGLGKT QV++FL+T + L TAL+V P+N NW EF KW+ + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653
Query: 659 FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 716
L V R + R+ +L +W+ GGV +IGY +RNL+ G++VK R + AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713
Query: 717 DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 776
D +VCDE H++KN + ++A+ ++ +RRI LTG+PLQNNL+EY+CMV+F++E LGS
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773
Query: 777 HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 836
EFRNRF NPI+NGQ +ST DV++M +R+HILYE L G VQR D + K LPPK +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833
Query: 837 VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 892
V+ V+++ +Q +LY+ +LD L G N+ K F +Q L++IW HP LQL
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893
Query: 893 --TKDKGY 898
++KGY
Sbjct: 1894 ISKENKGY 1901
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 100/154 (64%), Gaps = 10/154 (6%)
Query: 942 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1001
DW+ D + + + L++SGKMVLL +IL M +GDK LVFSQS+ +LDLIE +L R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059
Query: 1002 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1051
+ K W + D+YRLDG T + R+K E FN+ N R + +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119
Query: 1052 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1085
GSLGINL +ANRVII D SWNP+YD+Q+I+R +R
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYR 2153
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 335 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 389
CTAC ++ HP L V++CK+C +D+D + C WC +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230
Query: 390 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 431
C C FC C+ RN+ LS + + + W C C P L
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 273
>sp|Q61687|ATRX_MOUSE Transcriptional regulator ATRX OS=Mus musculus GN=Atrx PE=1 SV=3
Length = 2476
Score = 319 bits (817), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 164/369 (44%), Positives = 233/369 (63%), Gaps = 11/369 (2%)
Query: 540 ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 599
T +++ E E V++ ++ KLK HQV G++FMW+ +S+ K K G GCIL
Sbjct: 1519 TTKLVLDENEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVEKTKKS-PGSGCIL 1577
Query: 600 AHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP--SELKPLR 657
AH MGLGKT QV++FL+T + L TAL+V P+N NW EF KW+ ++ + L
Sbjct: 1578 AHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLNDNEKLE 1637
Query: 658 VFMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-G 715
V L V R + R+ +L +W+ GGV +IGY +RNL+ G++VK R + AL D G
Sbjct: 1638 VSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKDIFNKALVDPG 1697
Query: 716 PDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGS 775
PD +VCDE H++KN + ++A+ +K +RRI LTG+PLQNNL+EY+CMV+F++E LGS
Sbjct: 1698 PDFVVCDEGHILKNEASAVSKAMNSIKSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGS 1757
Query: 776 SHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTV 835
EFRNRF NPI+NGQ +ST DV++M +R+HILYE L G VQR D + K LPPK
Sbjct: 1758 IKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHE 1817
Query: 836 FVITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL- 892
+V+ V+++ +Q +LY+ +LD L G N K F +Q L++IW HP LQL
Sbjct: 1818 YVLAVRMTAIQCKLYQYYLDHLTGVGNSTEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLD 1877
Query: 893 ---TKDKGY 898
++KGY
Sbjct: 1878 YISKENKGY 1886
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 100/154 (64%), Gaps = 10/154 (6%)
Query: 942 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 1001
DW+ D + + + L++SGKMVLL +IL M +GDK LVFSQS+ +LDLIE +L R
Sbjct: 1983 DWYKDFVTDTDAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2042
Query: 1002 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1051
+ K W + D+YRLDG T + R+K E FN+ N R + +IST+A
Sbjct: 2043 EKTEDKEKPLIYKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIISTKA 2102
Query: 1052 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1085
GSLGINL +ANRVII D SWNP+YD+Q+I+R +R
Sbjct: 2103 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYR 2136
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 335 CTACNNVAIE-----VHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 389
CTAC ++ HP L V++CK+C +D+D + C WC +L+
Sbjct: 170 CTACGQQVNHFQKDSIYRHPSLKVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 229
Query: 390 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 431
C C FC C+ RN+ LS + + + W C C P L
Sbjct: 230 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICQPEPL 272
>sp|Q9DG67|RA54B_CHICK DNA repair and recombination protein RAD54B OS=Gallus gallus
GN=RAD54B PE=2 SV=1
Length = 918
Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 267/548 (48%), Gaps = 79/548 (14%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 621
I+ L+ HQ GI F++E ++ +R SG G ILA MGLGKT Q I+ ++T +R
Sbjct: 299 IANNLRPHQREGIVFLYECVM-GMRV--SGR--FGAILADEMGLGKTLQCISLVWTLLRQ 353
Query: 622 VNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWR 677
G L+ ALIVTP +++ NWK+EF KW SE ++VF V +D + E
Sbjct: 354 GVYGCKPVLKRALIVTPGSLVKNWKKEFQKWLGSER--IKVFT---VDQDHKVEEFIS-S 407
Query: 678 AKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 736
V +I Y R+L D+ A E ++L+CDE H +KN+ TT
Sbjct: 408 PLYSVMIISYEMLLRSL-------DQIQAIEF--------NLLICDEGHRLKNSSIKTTT 452
Query: 737 ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 796
AL + C+RRI LTG+P+QN+L E+Y +++FV G LGS +R ++ PI + ++T
Sbjct: 453 ALTNLSCERRIILTGTPIQNDLQEFYALIEFVNPGVLGSLSTYRKIYEEPIVRSREPSAT 512
Query: 797 SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD- 855
E+ + +R+ L F+ R V+ K LPPK +I + + LQ LY++ L
Sbjct: 513 KEEKDLGEKRAAELTRLTGLFILRRTQEVINKFLPPKKENIIFCQPTALQLELYRKLLSS 572
Query: 856 --LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 913
+ R+ N AL ++ NHP +L +E D SDE++
Sbjct: 573 RVISSCLQGRLENS----PHLICIGALKKLCNHPCLL------FKALKEKCCDPKSDEHV 622
Query: 914 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCS 973
+ + +G D F +D+ +D T+ E+D SGK+ +L+ +L
Sbjct: 623 E------------SSLYEGLTD--VFPQDYTSD-----TFSEID-SGKLQVLVKLLAAIR 662
Query: 974 NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVER 1033
+ V L+ Y L + K + G + RLDG T S+RQ++V+
Sbjct: 663 ELSSSERVV--------LVSNYTQTLNVLLETCKCY--GYSYTRLDGNTPVSQRQQIVDS 712
Query: 1034 FNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR----CMDK 1089
FN + L+S++AG +G+NL A+ +I+ D WNP D+QA+ R WR C
Sbjct: 713 FNSKFSPAF-IFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKCTVH 771
Query: 1090 QSQFLLTG 1097
+ L TG
Sbjct: 772 IYRLLTTG 779
>sp|B4MX21|RAD54_DROWI DNA repair and recombination protein RAD54-like OS=Drosophila
willistoni GN=okr PE=3 SV=1
Length = 784
Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 167/548 (30%), Positives = 265/548 (48%), Gaps = 110/548 (20%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 619
+S L+ HQ G+RFM++ + G KG GCI+A MGLGKT Q + ++T +
Sbjct: 149 LSNILRPHQREGVRFMYDCV--------EGKKGNFNGCIMADEMGLGKTLQCVTLVWTLL 200
Query: 620 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 676
R + A+IV+P +++ NW++EF KW + L +E S++ + L ++
Sbjct: 201 RQSCECKPTITKAIIVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKEDTIKALEQF 257
Query: 677 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 730
R V LI Y FR A +C Q+ +++CDE H +KN+
Sbjct: 258 SMNTSTRLGTPVLLISYETFRI-----------YANILC---QNEVGMVICDEGHRLKNS 303
Query: 731 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 790
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+NPI G
Sbjct: 304 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENPILKG 363
Query: 791 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 850
Q+T+S+ ++ + +++ L + + R ++ K LP K VI V+L+ +Q Y
Sbjct: 364 QNTDSSDKERERALEKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVICVRLTSVQLEFY 423
Query: 851 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGIL---QLTKDKGYPSR 901
FL +D+V NEK + A L ++ +HP ++ L +DKG+
Sbjct: 424 TNFLK-----SDKVRRSLADCNEKASLTALADITTLKKLCSHPDLIYEKMLARDKGF--- 475
Query: 902 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 961
EN + KP+++N L GK
Sbjct: 476 ---------ENSQNILPTNYKPKDLNPELSGK---------------------------- 498
Query: 962 MVLLLDIL--TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1019
+LLD + T+ +N DK ++ S TLDL E +L R K+ + RLD
Sbjct: 499 -FMLLDFMLATIRANSDDKVVLISNYTQTLDLFE----QLAR--------KRKYTFVRLD 545
Query: 1020 GRTESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1077
G +R K+V+RFN+P N C L +S++AG G+NL ANR+ + D WNP D
Sbjct: 546 GTMTIKKRSKVVDRFNDPEN---DCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDE 602
Query: 1078 QAIYRAWR 1085
QA+ R WR
Sbjct: 603 QAMARVWR 610
>sp|Q92698|RAD54_HUMAN DNA repair and recombination protein RAD54-like OS=Homo sapiens
GN=RAD54L PE=1 SV=2
Length = 747
Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 165/558 (29%), Positives = 265/558 (47%), Gaps = 87/558 (15%)
Query: 549 REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 608
+EK V + +S L+ HQ G++F+WE + R++ GCI+A MGLGKT
Sbjct: 136 KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190
Query: 609 FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 665
Q I ++T +R + A++V+P +++ NW E KW ++PL + + S
Sbjct: 191 LQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 247
Query: 666 RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 718
+D + L + R + +I Y FR L G LQ G +
Sbjct: 248 KDEIDQKLEGFMNQRGARVSSPILIISYETFR-LHVG--------------VLQKGSVGL 292
Query: 719 LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 778
++CDE H +KN+ T QAL + RR+ ++G+P+QN+L+EY+ +V FV G LG++HE
Sbjct: 293 VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352
Query: 779 FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 838
F+ F+ PI G+ ++ D ++ +R L + + R +++ K LP K V+
Sbjct: 353 FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412
Query: 839 TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 898
+L+PLQ LYKRFL + + K+ S + +L ++ NHP ++
Sbjct: 413 CCRLTPLQTELYKRFLR-QAKPAEELLEGKMSVSSLSSITSLKKLCNHPALI-------- 463
Query: 899 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 958
Y+ + E+ D G D F + + L E
Sbjct: 464 ----------------YDKCVEEE-----DGFVGALD--LFPPGYSSKAL------EPQL 494
Query: 959 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1016
SGKM++L IL + S DK ++ S TLDL E KL + + Y
Sbjct: 495 SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 541
Query: 1017 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1076
RLDG +R K+VERFN P + ++S++AG G+NL ANR+++ D WNP D
Sbjct: 542 RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600
Query: 1077 LQAIYRAWRCMDKQSQFL 1094
QA+ R WR K++ ++
Sbjct: 601 EQAMARVWRDGQKKTCYI 618
>sp|Q9JIM3|RAD26_MOUSE Putative DNA repair and recombination protein RAD26-like OS=Mus
musculus GN=Rad26l PE=2 SV=2
Length = 699
Score = 218 bits (554), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 168/580 (28%), Positives = 257/580 (44%), Gaps = 118/580 (20%)
Query: 553 EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 612
E+ IP +I+ L+ +Q G +F++ + I+ G GCIL MGLGKT QVI
Sbjct: 109 EDGDSIPYTINRYLRDYQREGAQFLYRHYIE----------GRGCILGDDMGLGKTIQVI 158
Query: 613 AFLYTAM-----------------------RSVNLGLRTALIVTPVNVLHNWKQEFMKWR 649
+FL + + + + LIV P++VL+NWK E W
Sbjct: 159 SFLAAVLHKKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTW- 217
Query: 650 PSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC 709
RV +L +D ELL + K + L Y R + E
Sbjct: 218 ----GYFRVTVLHGSKKDN--ELLRLKQRKCEIALTTYETLR------------LCLEEL 259
Query: 710 HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 769
++L+ ++ DEAH IKN +A T+ +K VKC+ RI LTG+ LQNN+ E +C++D+
Sbjct: 260 NSLEWSA--IIVDEAHRIKNPKARVTEVMKAVKCKVRIGLTGTVLQNNMKELWCVMDWAV 317
Query: 770 EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 829
G LGS F+ +F +P+E+GQ +T ++ + H L +++ G+ R ++K
Sbjct: 318 PGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGWFLRRTKTLIKGQ 377
Query: 830 LPPKTVFVITVKLSPLQRRLYKRFLDLHGF------------------------TNDRVS 865
LP K ++ L+ Q+ +Y+ L+ TN R
Sbjct: 378 LPKKEDRMVYCSLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSR-- 435
Query: 866 NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRN 925
+ +R + L ++ NH +LQ A +S + +
Sbjct: 436 GDTVRTLCLSYLTVLQKVANHVALLQ------------AASTSKHQETVIKRICDRVFSR 483
Query: 926 MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQS 985
DF+Q D F T + YSGKM +L +L DK L+FS S
Sbjct: 484 FPDFVQKSKDAAF------------ETLSDPKYSGKMKVLQQLLNHFRKQRDKVLLFSFS 531
Query: 986 IPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCT 1045
LD+++ Y G D+ RLDG T+S ER K+V+ FN ++ V
Sbjct: 532 TKLLDVLQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--SQDVNIC 577
Query: 1046 LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1085
L+ST AG LG+N AN VI+ D +WNP DLQA+ RA+R
Sbjct: 578 LVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYR 617
>sp|Q03468|ERCC6_HUMAN DNA excision repair protein ERCC-6 OS=Homo sapiens GN=ERCC6 PE=1 SV=1
Length = 1493
Score = 218 bits (554), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 163/551 (29%), Positives = 257/551 (46%), Gaps = 102/551 (18%)
Query: 553 EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 612
+E ++P + KL +Q G+R++WE Q G IL MGLGKT Q+I
Sbjct: 494 DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 543
Query: 613 AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 663
AFL Y+ +R+ GL +IV P V+H W +EF W P P RV +L +
Sbjct: 544 AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 599
Query: 664 V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 721
S + E L + A G+ + Y+ R + +++R H ++
Sbjct: 600 TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 645
Query: 722 DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 781
DE H I+N A T A KQ + RI L+GSP+QNNL E + + DF+ G LG+ F
Sbjct: 646 DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 705
Query: 782 RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 839
+F PI G ++N++ VK + + +L + + + ++RM +V + LP K V+
Sbjct: 706 QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 765
Query: 840 VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 899
+L+ Q ++Y+ F+D R+ N +++ F+G AL +I NHP +
Sbjct: 766 CRLTDEQHKVYQNFVDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--------- 812
Query: 900 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 959
P+N+ K +D L E + S
Sbjct: 813 --------------------SGGPKNL--------------KGLPDDELEEDQFGYWKRS 838
Query: 960 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1019
GKM+++ +L + G + L+FSQS LD++E +L + + ++D
Sbjct: 839 GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYTYLKMD 886
Query: 1020 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1079
G T + RQ L+ R+NE + + L++TR G LG+NL ANRV+I D WNP+ D QA
Sbjct: 887 GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 944
Query: 1080 IYRAWRCMDKQ 1090
RAWR K+
Sbjct: 945 RERAWRIGQKK 955
>sp|A4PBL4|RAD54_ORYSJ DNA repair and recombination protein RAD54 OS=Oryza sativa subsp.
japonica GN=RAD54 PE=1 SV=1
Length = 980
Score = 216 bits (550), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 164/558 (29%), Positives = 271/558 (48%), Gaps = 78/558 (13%)
Query: 555 AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 614
A+++ + L+ HQ G++FM++ + + + D GCILA MGLGKT Q I
Sbjct: 224 AIKVDHLLVRYLRPHQREGVQFMFD----CVSGLLNDDGISGCILADDMGLGKTLQSITL 279
Query: 615 LYTAM---RSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 671
LYT + ++ A++VTP +++ NW+ E +KW ++ L + RA+
Sbjct: 280 LYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLKGRVQ------LLALCESTRAD 333
Query: 672 LLA------KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAH 725
+L+ K ++ V ++ Y FR + R D+L+CDEAH
Sbjct: 334 VLSGIESFLKPLSRLQVLIVSYETFR-------MHSSKFERP------GSCDLLICDEAH 380
Query: 726 MIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQN 785
+KN + T +AL + C+RRI L+G+P+QN+L E++ MV+F G LG + FR ++
Sbjct: 381 RLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYEA 440
Query: 786 PIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPL 845
PI G+ +++E+ + ++RS L ++ F+ R ++ LPPK V V+ KL+ L
Sbjct: 441 PIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTAL 500
Query: 846 QRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWNHPGILQLTKDKGYPSREDA 904
Q LY F +H R+ +E ++S Y AL ++ NHP ++ D
Sbjct: 501 QTALYNHF--IHSKNVKRLISEGTKQSKVLAYITALKKLCNHPKLIY-----------DT 547
Query: 905 EDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVL 964
S++ ++ + P + G++ W +L SGKM +
Sbjct: 548 IKSNNSGGSGFDDCLRFFP---PELFSGRSGSWTGGGGMWVEL-----------SGKMHV 593
Query: 965 LLDILTMCS-NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1023
L +L D+ ++ S TLDL ++L R ++ + RLDG T
Sbjct: 594 LARLLGHLRLKTDDRIVLVSNYTQTLDL----FAQLCR--------ERRYPYIRLDGATS 641
Query: 1024 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1083
++RQKLV +FN+P ++ L+S++AG G+NL NR+I+ D WNP D QA R
Sbjct: 642 INKRQKLVNQFNDP-SRDEFVFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDKQAAARV 700
Query: 1084 WRCMDKQS----QFLLTG 1097
WR K+ +FL TG
Sbjct: 701 WRDGQKKRVYIYRFLSTG 718
>sp|B4KHL5|RAD54_DROMO DNA repair and recombination protein RAD54-like OS=Drosophila
mojavensis GN=okr PE=3 SV=1
Length = 783
Score = 216 bits (550), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 165/548 (30%), Positives = 260/548 (47%), Gaps = 110/548 (20%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 619
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q + +T +
Sbjct: 145 LSNVLRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLTWTLL 196
Query: 620 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 676
R + A+IV+P +++ NW++EF KW + L +E S++ L ++
Sbjct: 197 RQSPDCKPTISKAIIVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKEDTTRALEQF 253
Query: 677 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 730
R V LI Y FR H+ +C + +++CDE H +KN+
Sbjct: 254 AMNTATRCGTPVLLISYETFR---LYAHI--------LC---KTEVGMVICDEGHRLKNS 299
Query: 731 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 790
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+N I G
Sbjct: 300 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENSILRG 359
Query: 791 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 850
Q+ +ST + + Q++ L + + R ++ K LP K V+ VKL+P+Q ++Y
Sbjct: 360 QNADSTDAERQRALQKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVVCVKLTPVQLQIY 419
Query: 851 KRFLDLHGFTNDRVS------NEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSR 901
FL +D+V NEK + A L ++ NHP ++ K+KG+
Sbjct: 420 TNFLK-----SDQVRRSLADCNEKASLTALADITTLKKLCNHPDLIYEKIAAKEKGF--- 471
Query: 902 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 961
EN + KP+++N L GK
Sbjct: 472 ---------ENSQNVLPPNYKPKDVNPELSGK---------------------------- 494
Query: 962 MVLLLDIL--TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1019
+LLD + + +N DK ++ S TLDL E +L R K+ + RLD
Sbjct: 495 -FMLLDFMLAAIRANSDDKVVLISNYTQTLDLFE----QLAR--------KRKYTYVRLD 541
Query: 1020 GRTESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1077
G +R K+V+RFN+P C L +S++AG G+NL ANR+ + D WNP D
Sbjct: 542 GTMTIKKRSKVVDRFNDP---STDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDE 598
Query: 1078 QAIYRAWR 1085
QA+ R WR
Sbjct: 599 QAMARVWR 606
>sp|P70270|RAD54_MOUSE DNA repair and recombination protein RAD54-like OS=Mus musculus
GN=Rad54l PE=1 SV=2
Length = 747
Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 164/549 (29%), Positives = 258/549 (46%), Gaps = 87/549 (15%)
Query: 549 REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 608
+EK V + +S L+ HQ G++F+WE + R++ GCI+A MGLGKT
Sbjct: 136 KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190
Query: 609 FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 665
Q I ++T +R + A++V+P +++ NW E KW ++PL +
Sbjct: 191 LQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDGGSKDE 250
Query: 666 RDRRAELLAKWRA---KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCD 722
DR+ E R + +I Y FR L G +K N+ +++CD
Sbjct: 251 IDRKLEGFMNQRGARVPSPILIISYETFR-LHVGV-LKKGNVG------------LVICD 296
Query: 723 EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 782
E H +KN+ T QAL + RR+ ++G+P+QN+L+EY+ +V FV G LG++HEF+
Sbjct: 297 EGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKH 356
Query: 783 FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM----NVVKKDLPPKTVFVI 838
F+ PI + ++ D QR +L G V R + +++ K LP K V+
Sbjct: 357 FELPILKSRDAAASEAD----RQRGEERLRELIGIVNRCLIRRTSDILSKYLPVKIEQVV 412
Query: 839 TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 898
+L+PLQ LYKRFL + + K+ S + +L ++ NHP ++
Sbjct: 413 CCRLTPLQTELYKRFLR-QAKPEEELREGKMSVSSLSSITSLKKLCNHPALI-------- 463
Query: 899 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 958
Y+ + E+ D +G G F + + + E
Sbjct: 464 ----------------YDKCVAEE-----DGFEGTL--GIFPPGYNSKAV------EPQL 494
Query: 959 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 1016
SGKM++L IL + S DK ++ S TLDL E KL + + Y
Sbjct: 495 SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRVRRYLYV 541
Query: 1017 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 1076
RLDG +R K+VERFN P + ++S++AG G+NL ANR+++ D WNP D
Sbjct: 542 RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600
Query: 1077 LQAIYRAWR 1085
QA+ R WR
Sbjct: 601 EQAMARVWR 609
>sp|Q5T890|RAD26_HUMAN Putative DNA repair and recombination protein RAD26-like OS=Homo
sapiens GN=RAD26L PE=1 SV=1
Length = 712
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 165/574 (28%), Positives = 254/574 (44%), Gaps = 115/574 (20%)
Query: 558 IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 617
IP +I+ L+ +Q G RF++ + I G GCIL MGLGKT QVI+FL
Sbjct: 126 IPYTINRYLRDYQREGTRFLYGHYIH----------GGGCILGDDMGLGKTVQVISFLAA 175
Query: 618 AM------------------RSV------NLGLRTALIVTPVNVLHNWKQEFMKWRPSEL 653
+ RS+ + + LIV P++VL+NWK E W
Sbjct: 176 VLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTW----- 230
Query: 654 KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 713
RV +L +D EL+ + K + L Y R + + ++L+
Sbjct: 231 GYFRVTVLHGNRKDN--ELIRVKQRKCEIALTTYETLR------------LCLDELNSLE 276
Query: 714 DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 773
++ DEAH IKN +A T+ +K +KC RI LTG+ LQNN+ E +C++D+ G L
Sbjct: 277 WSA--VIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLL 334
Query: 774 GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 833
GS F+ +F +P+E+GQ +T ++ + L +++ G+ R ++K LP K
Sbjct: 335 GSGTYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKK 394
Query: 834 TVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKIRK 871
++ L+ Q+ +Y+ L+ T E ++
Sbjct: 395 EDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGQKRRNCCYKTNSHGETVKT 454
Query: 872 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 931
+ + L ++ NH +LQ A +S + + + DF+Q
Sbjct: 455 LYLSYLTVLQKVANHVALLQ------------AASTSKQQETLIKRICDQVFSRFPDFVQ 502
Query: 932 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 991
D F T + YSGKM +L +L C DK L+FS S LD+
Sbjct: 503 KSKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDV 550
Query: 992 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 1051
++ Y G D+ RLDG T+S ER K+V+ FN + V L+ST A
Sbjct: 551 LQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--TQDVNICLVSTMA 596
Query: 1052 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1085
G LG+N AN V++ D +WNP DLQAI RA+R
Sbjct: 597 GGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYR 630
>sp|O12944|RAD54_CHICK DNA repair and recombination protein RAD54-like (Fragment) OS=Gallus
gallus GN=RAD54L PE=2 SV=1
Length = 733
Score = 214 bits (545), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 155/542 (28%), Positives = 255/542 (47%), Gaps = 81/542 (14%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 621
+S L+ HQ G++F+W+ + R++ GCI+A MGLGKT Q I ++T +R
Sbjct: 138 LSRVLRPHQREGVKFLWDCVTS--RRIPGSH---GCIMADEMGLGKTLQCITLMWTLLRQ 192
Query: 622 ---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRV--FMLEDVSRDRRAELLAK- 675
+ A++V+P +++ NW E KW ++PL + E++ R + +
Sbjct: 193 SPDCKPEIEKAMVVSPSSLVRNWYNEVEKWLGGRIQPLAIDGGSKEEIDRKLVGSMNQRG 252
Query: 676 WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRADT 734
R + +I Y FR H + ALQ G +++CDE H +KN+ T
Sbjct: 253 LRVPSPILIISYETFR-----LHAE----------ALQKGSVGLVICDEGHRLKNSENQT 297
Query: 735 TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 794
QAL + RR+ ++G+P+QN+L+EY+ +V FV G LG++ EF+ F+ PI G+ +
Sbjct: 298 YQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFELPILKGRDAD 357
Query: 795 STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 854
++ + + +R L + + R +++ K LP K V+ +L+PLQ LYK FL
Sbjct: 358 ASEAERQKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQAELYKNFL 417
Query: 855 DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 914
+ + KI S + +L ++ NHP ++
Sbjct: 418 K-QAKPVEELKEGKINVSSLSSITSLKKLCNHPALI------------------------ 452
Query: 915 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC-S 973
Y+ + E ++GF + E SGKM++L IL + S
Sbjct: 453 YDKCVEE-------------EEGFMGALDLFPAGYSTKSVEPQLSGKMLVLDYILAVTKS 499
Query: 974 NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY-RLDGRTESSERQKLVE 1032
DK ++ S TLDL E KL + + Y RLDG +R K+VE
Sbjct: 500 TSNDKVVLVSNYTQTLDLFE-------------KLCRNRRYLYVRLDGTMSIKKRAKVVE 546
Query: 1033 RFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRCMDKQSQ 1092
RFN P + ++S++AG G+NL ANR+++ D WNP D QA+ R WR K++
Sbjct: 547 RFNSPSSPEF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTC 605
Query: 1093 FL 1094
++
Sbjct: 606 YI 607
>sp|B3MMA5|RAD54_DROAN DNA repair and recombination protein RAD54-like OS=Drosophila
ananassae GN=okr PE=3 SV=1
Length = 791
Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 164/539 (30%), Positives = 261/539 (48%), Gaps = 93/539 (17%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 621
+S L+ HQ G+RFM+E + + K GD GCI+A MGLGKT Q + ++T +R
Sbjct: 155 LSNILRPHQREGVRFMYECV-----EGKKGDFN-GCIMADEMGLGKTLQCVTLVWTLLRQ 208
Query: 622 ---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRA 678
+ A++V+P +++ NW++EF KW L L + + R E + +
Sbjct: 209 GPESKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLAMEGGTKENTIRVLEQFSMTSS 268
Query: 679 KGG--VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 736
K G V LI Y FR + EI + G +++CDE H +KN+ T Q
Sbjct: 269 KLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLTYQ 314
Query: 737 ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 796
AL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+N I GQ+ +ST
Sbjct: 315 ALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENSILRGQNADST 374
Query: 797 SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 856
+ K +++ L + + R ++ K LP K VI VKL+ +Q +LY FL+
Sbjct: 375 EGERKKAIEKTQELIGLVDQCIIRRTNQILTKYLPIKFEMVICVKLTAIQLQLYTNFLN- 433
Query: 857 HGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQL---TKDKGYPSREDAEDS 907
+D+V NEK + A L +I +HP ++ K+KG+ + ++ S
Sbjct: 434 ----SDQVRRSLADCNEKASLTALADITTLKKICSHPDLIHQKIEAKEKGFENSQNVLPS 489
Query: 908 SSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLD 967
+ KP+ + ++SGK +LL
Sbjct: 490 NY------------KPKEICP----------------------------EWSGKFMLLDF 509
Query: 968 ILTMCSNMG-DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSE 1026
+L G DK ++ S TLDL E +L R K G + RLDG +
Sbjct: 510 MLAAIRAAGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGTMSIKK 557
Query: 1027 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1085
R K+V++FN+P + ++S++AG G+NL ANR+ + D WNP D QA+ R WR
Sbjct: 558 RSKVVDKFNDP-DSECFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWR 615
>sp|O76460|RAD54_DROME DNA repair and recombination protein RAD54-like OS=Drosophila
melanogaster GN=okr PE=1 SV=1
Length = 784
Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 169/570 (29%), Positives = 269/570 (47%), Gaps = 108/570 (18%)
Query: 534 EVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDK 593
E +G T +V+VV + +S L+ HQ G+RFM+E + G +
Sbjct: 133 ERMGMDPTKVLVHVV---------VDPLLSNILRPHQREGVRFMYECV--------EGKR 175
Query: 594 GL--GCILAHTMGLGKTFQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKW 648
G GCI+A MGLGKT Q + ++T +R + A++V+P +++ NW++EF KW
Sbjct: 176 GNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKW 235
Query: 649 RPSELK--PLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAR 706
L P+ E+ R + R V LI Y FR +
Sbjct: 236 LHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLISYETFR------------IYA 283
Query: 707 EICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVD 766
EI + G +++CDE H +KN+ T QAL +K +RR+ L+G+P+QN+L EYY +V+
Sbjct: 284 EILCKYEVG--MVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVN 341
Query: 767 FVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 826
FV LG++ F+ F++ I GQ+T+ST ++ + +++ L + + R ++
Sbjct: 342 FVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQIL 401
Query: 827 KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVS------NEKIRKSFFAGYQAL 880
K LP K VI KL+ +Q LY FL +D+V NEK + A L
Sbjct: 402 TKYLPVKFEMVICAKLTAIQLELYTNFLK-----SDQVRRSLADCNEKASLTALADITTL 456
Query: 881 AQIWNHPGIL--QLT-KDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDG 937
+I +HP ++ +LT ++KG+ + ++ S+ KP+++N L GK
Sbjct: 457 KKICSHPDLIYEKLTAREKGFENSQNVLPSNY------------KPKDLNPELSGK---- 500
Query: 938 FFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC--SNMGDKSLVFSQSIPTLDLIEFY 995
+LLD + + DK ++ S TLDL E
Sbjct: 501 -------------------------FMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFE-- 533
Query: 996 LSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLG 1055
+L R K G + RLDG +R K+V+RFN+P + ++S++AG G
Sbjct: 534 --QLARKRKYG--------FVRLDGTMSIKKRSKVVDRFNDPESDSF-LFMLSSKAGGCG 582
Query: 1056 INLHSANRVIIVDGSWNPTYDLQAIYRAWR 1085
+NL ANR+ + D WNP D QA+ R WR
Sbjct: 583 LNLIGANRLFMFDPDWNPANDEQAMARVWR 612
>sp|P41410|RAD54_SCHPO DNA repair protein rhp54 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rhp54 PE=1 SV=2
Length = 852
Score = 211 bits (536), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 168/562 (29%), Positives = 270/562 (48%), Gaps = 94/562 (16%)
Query: 555 AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 614
AV I ++ L+ HQ+ G++F+++ + I + +G CI+A MGLGKT Q IA
Sbjct: 253 AVVIDPKLARILRPHQIEGVKFLYKCVTGRIDRCANG-----CIMADEMGLGKTLQCIAL 307
Query: 615 LYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA 670
L+T ++ S G + A+I P +++ NW E +KW + + F+L+ S +
Sbjct: 308 LWTLLKQSPQAGKPTIEKAIITCPSSLVKNWANELVKWLGKD--AITPFILDGKSSKQEL 365
Query: 671 EL-LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDE 723
+ L +W + G V + Y R S+ +H+ + + +L+CDE
Sbjct: 366 IMALQQWASVHGRQVTRPVLIASYETLR--SYVEHLNNAEIG------------MLLCDE 411
Query: 724 AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 783
H +KN+ + T AL ++ QRR+ L+G+P+QN+L EY+ +++F G LGS EFR +
Sbjct: 412 GHRLKNSDSLTFTALDKLNVQRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNY 471
Query: 784 QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 843
+ PI G+ + T +D + + + L + + F+ R +++ K LP K V+ LS
Sbjct: 472 EIPILKGRDADGTEKDKENGDAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVVFCNLS 531
Query: 844 PLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA---LAQIWNHPGILQLTKDKGYPS 900
Q LYK F+ T+ + N+ +R + +A L +I NHP +L LT+D
Sbjct: 532 EFQLSLYKHFI-----TSPEI-NKILRGTGSQPLKAIGLLKKICNHPDLLNLTEDL---- 581
Query: 901 REDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSG 960
E + G PR + + +N D SG
Sbjct: 582 ----------EGCEALFPPGFIPRELRG--RDRNIDS-------------------SLSG 610
Query: 961 KMVLLLDILTMCSN-MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1019
KM++L +L DK ++ S TLDL E +L R +G RLD
Sbjct: 611 KMLVLERMLYQIKQETDDKIVLISNYTSTLDLFE----QLCR--------ARGYKALRLD 658
Query: 1020 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1079
G ++RQ+LV+ FN+P K L+S++AG GINL ANR+I+ D WNP D QA
Sbjct: 659 GTMNVNKRQRLVDTFNDP-EKDAFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQA 717
Query: 1080 IYRAWRCMDKQS----QFLLTG 1097
+ R WR K+ +F+ TG
Sbjct: 718 LARVWRDGQKKDCFVYRFIATG 739
>sp|B4JCS7|RAD54_DROGR DNA repair and recombination protein RAD54-like OS=Drosophila
grimshawi GN=okr PE=3 SV=1
Length = 786
Score = 209 bits (533), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 160/550 (29%), Positives = 259/550 (47%), Gaps = 114/550 (20%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 619
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q + +T +
Sbjct: 145 LSNVLRPHQREGVRFMYECV--------EGKRGSFNGCIMADEMGLGKTLQCVTLTWTLL 196
Query: 620 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 676
R + A++V+P +++ NW++EF KW + L +E S++ L ++
Sbjct: 197 RQSADCKPTISKAIVVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKEETTRTLEQF 253
Query: 677 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 730
R V LI Y FR H+ +C + +++CDE H +KN+
Sbjct: 254 AMNTSTRCGTPVLLISYETFR---LYAHI--------LC---KTEVGMVICDEGHRLKNS 299
Query: 731 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 790
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+N I G
Sbjct: 300 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTATDFKRNFENAILRG 359
Query: 791 QHTNSTSEDVKIMNQRSHILYEQLKGFVQ----RMDMNVVKKDLPPKTVFVITVKLSPLQ 846
Q+ +ST + +R+ + ++L G V R ++ K LP K V+ KL+ +Q
Sbjct: 360 QNADSTDTE----RERALLKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVVCAKLTAVQ 415
Query: 847 RRLYKRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKG 897
++Y FL +D+V NEK + + L ++ NHP ++ ++KG
Sbjct: 416 LQIYTNFLK-----SDQVCRSLADCNEKTSLTALSDITTLKKLCNHPDLIYEKLAAREKG 470
Query: 898 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 957
+ EN + KP+++N L GK
Sbjct: 471 F------------ENSQNVLPANYKPKDINPELSGK------------------------ 494
Query: 958 YSGKMVLLLDILTMC--SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDW 1015
+LLD + +N DK ++ S TLDL E +L R K+ +
Sbjct: 495 -----FMLLDFMLAAIRANSDDKVVLISNYTQTLDLFE----QLAR--------KRKYSY 537
Query: 1016 YRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTY 1075
RLDG +R K+V+RFN+P + ++S++AG G+NL ANR+ + D WNP
Sbjct: 538 VRLDGTMTIKKRSKVVDRFNDP-SSDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN 596
Query: 1076 DLQAIYRAWR 1085
D QA+ R WR
Sbjct: 597 DEQAMARVWR 606
>sp|B3NAN8|RAD54_DROER DNA repair and recombination protein RAD54-like OS=Drosophila erecta
GN=okr PE=3 SV=1
Length = 784
Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 166/546 (30%), Positives = 256/546 (46%), Gaps = 107/546 (19%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 619
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q + ++T +
Sbjct: 152 LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLL 203
Query: 620 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELK--PLRVFMLEDVSRDRRAELLA 674
R + A++V+P +++ NW++EF KW L P+ E+ R +
Sbjct: 204 RQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMT 263
Query: 675 KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 734
R V LI Y FR + EI + G +++CDE H +KN+ T
Sbjct: 264 SSRLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLT 309
Query: 735 TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 794
QAL +K +RR+ L+G+P+QN+L EYY +V+FV LG++ F+ F++ I GQ+T+
Sbjct: 310 YQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTD 369
Query: 795 STSEDVKIMNQRSHILYEQLKGFVQ----RMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 850
ST + QR+ ++L G V R ++ K LP K VI KL+ +Q LY
Sbjct: 370 STDAE----RQRAIAKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTSIQLELY 425
Query: 851 KRFLDLHGFTNDRVS------NEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSR 901
FL +D+V EK + A L +I +HP ++ +DKG+
Sbjct: 426 TNFL-----KSDQVRRSLADCKEKASLTALADITTLKKICSHPNLIYEKITARDKGF--- 477
Query: 902 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 961
E+S + +YN +++N L GK
Sbjct: 478 ---ENSQNVLPSNYNA------KDLNPELSGK---------------------------- 500
Query: 962 MVLLLDILTMC--SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1019
+LLD + ++ DK ++ S TLDL E +L R K G + RLD
Sbjct: 501 -FMLLDFMLAAIRADGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLD 547
Query: 1020 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1079
G +R K+V+RFN+P + ++S++AG G+NL ANR+ + D WNP D QA
Sbjct: 548 GTMSIKKRSKVVDRFNDPESDSF-LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQA 606
Query: 1080 IYRAWR 1085
+ R WR
Sbjct: 607 MARVWR 612
>sp|B4NXB8|RAD54_DROYA DNA repair and recombination protein RAD54-like OS=Drosophila yakuba
GN=okr PE=3 SV=2
Length = 784
Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 162/542 (29%), Positives = 256/542 (47%), Gaps = 99/542 (18%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 619
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q + ++T +
Sbjct: 152 LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLL 203
Query: 620 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELK--PLRVFMLEDVSRDRRAELLA 674
R + A++V+P +++ NW++EF KW L P+ E+ R +
Sbjct: 204 RQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMT 263
Query: 675 KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 734
R V LI Y FR + EI + G +++CDE H +KN+ T
Sbjct: 264 SSRLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLT 309
Query: 735 TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 794
QAL +K +RR+ L+G+P+QN+L EYY +V+FV LG++ F+ F++ I GQ+T+
Sbjct: 310 YQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTD 369
Query: 795 STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 854
ST + + +++ L + + R ++ K LP K VI KL+ +Q LY FL
Sbjct: 370 STEGERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTSIQLELYTNFL 429
Query: 855 DLHGFTNDRVS------NEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSREDAE 905
+D+V NEK + A L +I +HP ++ ++KG+ E
Sbjct: 430 K-----SDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKITAREKGF------E 478
Query: 906 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 965
+S + +YN +++N L GK +L
Sbjct: 479 NSQNVLPSNYNT------KDLNPELSGK-----------------------------FML 503
Query: 966 LDILTMC--SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 1023
LD + ++ DK ++ S TLDL E +L R K G + RLDG
Sbjct: 504 LDFMLAAIRADGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGTMS 551
Query: 1024 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 1083
+R K+V+RFN+P + ++S++AG G+NL ANR+ + D WNP D QA+ R
Sbjct: 552 IKKRSKVVDRFNDPESDSF-LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARV 610
Query: 1084 WR 1085
WR
Sbjct: 611 WR 612
>sp|B4M9A8|RAD54_DROVI DNA repair and recombination protein RAD54-like OS=Drosophila virilis
GN=okr PE=3 SV=1
Length = 786
Score = 206 bits (524), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 160/548 (29%), Positives = 256/548 (46%), Gaps = 110/548 (20%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 619
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q + +T +
Sbjct: 145 LSNVLRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLTWTLL 196
Query: 620 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 676
R + A++V+P +++ NW++EF KW + L +E S++ L ++
Sbjct: 197 RQSPDCKPTISKAIVVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKEDTTRTLEQF 253
Query: 677 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 730
R V LI Y FR S H+ +C + +++CDE H +KN+
Sbjct: 254 AMNTATRCGTPVLLISYETFRLYS---HI--------LC---KTEVGMVICDEGHRLKNS 299
Query: 731 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 790
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG+ +F+ F+N I G
Sbjct: 300 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTGSDFKRNFENAILRG 359
Query: 791 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 850
Q+ +ST + + +++ L + + R ++ K LP K V+ KL+ +Q +LY
Sbjct: 360 QNADSTDAERERALEKTQELVGLVNQCIIRRTNQILTKYLPVKFEMVVCAKLTAVQLQLY 419
Query: 851 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSR 901
FL +D+V +K + A L ++ NHP ++ ++KG+
Sbjct: 420 TNFLK-----SDQVRRSLADCTDKTTLTALADITTLKKLCNHPDLIYEKIAAREKGF--- 471
Query: 902 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 961
EN + KP+++N L GK
Sbjct: 472 ---------ENSQNVLPPNYKPKDVNPELSGK---------------------------- 494
Query: 962 MVLLLDILTMC--SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1019
+LLD + +N DK ++ S TLDL E +L R K+ + RLD
Sbjct: 495 -FMLLDFMLAAIRANSDDKVVLISNYTQTLDLFE----QLAR--------KRKYSYVRLD 541
Query: 1020 GRTESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1077
G +R K+V+RFN+P C L +S++AG G+NL ANR+ + D WNP D
Sbjct: 542 GTMTIKKRSKVVDRFNDPA---TDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDE 598
Query: 1078 QAIYRAWR 1085
QA+ R WR
Sbjct: 599 QAMARVWR 606
>sp|Q29KH2|RAD54_DROPS DNA repair and recombination protein RAD54-like OS=Drosophila
pseudoobscura pseudoobscura GN=okr PE=3 SV=2
Length = 782
Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 164/546 (30%), Positives = 264/546 (48%), Gaps = 105/546 (19%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 619
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q +A ++T +
Sbjct: 148 LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVALVWTLL 199
Query: 620 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 676
+ + +IV+P +++ NW++EF KW + L +E S++ L ++
Sbjct: 200 KQSAECKPTINKCIIVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKENTVRALEQF 256
Query: 677 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 730
R V LI Y FR + EI + G +++CDE H +KN+
Sbjct: 257 SMNASTRLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNS 302
Query: 731 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 790
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+N I G
Sbjct: 303 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENCILRG 362
Query: 791 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 850
Q+ +ST ++ +++ L + + + R ++ K LP K VI KL+P+Q +LY
Sbjct: 363 QNADSTDKERDRALEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVICAKLTPIQLQLY 422
Query: 851 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGIL---QLTKDKGYPSR 901
FL +D+V EK + A L ++ +HP ++ ++KG+
Sbjct: 423 TNFL-----KSDQVRRSLADCKEKASLTALADITTLKKLCSHPNLICEKIAAEEKGF--- 474
Query: 902 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 961
E+S + ++YN GE +N L GK +K LD+
Sbjct: 475 ---ENSQNILPINYNPK-GE----INPELSGK-------------------FKLLDFM-- 505
Query: 962 MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1021
+ + ++ DK ++ S TLDL E +L R K G + RLDG
Sbjct: 506 ------LAAIRAHGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGT 547
Query: 1022 TESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1079
+R K+V+RFN+P C L +S++AG G+NL ANR+ + D WNP D QA
Sbjct: 548 MSIKKRSKVVDRFNDP---ESDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQA 604
Query: 1080 IYRAWR 1085
+ R WR
Sbjct: 605 MARVWR 610
>sp|B4GS98|RAD54_DROPE DNA repair and recombination protein RAD54-like OS=Drosophila
persimilis GN=okr PE=3 SV=1
Length = 782
Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 164/546 (30%), Positives = 262/546 (47%), Gaps = 105/546 (19%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 619
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q +A ++T +
Sbjct: 148 LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVALVWTLL 199
Query: 620 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 676
+ + +IV+P +++ NW++EF KW + L +E S++ L ++
Sbjct: 200 KQSAECKPTINKCIIVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKENTVRALEQF 256
Query: 677 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 730
R V LI Y FR + EI + G +++CDE H +KN+
Sbjct: 257 SMNASTRLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNS 302
Query: 731 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 790
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+N I G
Sbjct: 303 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENCILRG 362
Query: 791 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 850
Q+ +ST ++ +++ L + + + R ++ K LP K VI KL+P+Q +LY
Sbjct: 363 QNADSTDKERDRALEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVICAKLTPIQLQLY 422
Query: 851 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGIL---QLTKDKGYPSR 901
FL +D+V EK + A L ++ +HP ++ +KG+
Sbjct: 423 TNFL-----KSDQVRRSLADCKEKASLTALADITTLKKLCSHPNLICEKIAAGEKGF--- 474
Query: 902 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 961
E+S + ++YN GE +N L GK +K LD+
Sbjct: 475 ---ENSQNILPINYNPK-GE----INPELSGK-------------------FKLLDFM-- 505
Query: 962 MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1021
+ + ++ DK ++ S TLDL E L R K G + RLDG
Sbjct: 506 ------LAAIRAHGNDKVVLISNYTQTLDLFEL----LARKRKYG--------FVRLDGT 547
Query: 1022 TESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 1079
+R K+V+RFN+P C L +S++AG G+NL ANR+ + D WNP D QA
Sbjct: 548 MSIKKRSKVVDRFNDP---ESDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQA 604
Query: 1080 IYRAWR 1085
+ R WR
Sbjct: 605 MARVWR 610
>sp|Q9UR24|RHP26_SCHPO DNA repair protein rhp26 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rhp26 PE=4 SV=1
Length = 973
Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 168/568 (29%), Positives = 263/568 (46%), Gaps = 119/568 (20%)
Query: 553 EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 612
E IP I L +QV ++++WE Q G I+ MGLGKT Q++
Sbjct: 264 EGGFTIPGDIRPHLFRYQVTCVQWLWELYCQEA----------GGIIGDEMGLGKTIQIV 313
Query: 613 AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML------EDVSR 666
+FL + S + ALIV P ++ W EF W PLRV +L + SR
Sbjct: 314 SFLSSLHHSGKFQ-KPALIVCPATLMKQWVNEFHTW----WAPLRVVVLHATGSGQRASR 368
Query: 667 DRR-----AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC---HALQD---- 714
++R A +K + L G ++ SF ++ K N+ + H L
Sbjct: 369 EKRQYESDASESEAEESKTSIKLRGASS----SFHRYAK--NLVESVFTRGHILITTYAG 422
Query: 715 ----GPDIL-------VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYC 763
G IL V DE H I+N ++ + + KQ++ RI L+G+P+QNNL E +
Sbjct: 423 LRIYGDLILPREWGYCVLDEGHKIRNPDSEISISCKQIRTVNRIILSGTPIQNNLTELWN 482
Query: 764 MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMD 822
+ DFV G LG+ F+N+F PI G + N+++ V+ + + +L + + + ++RM
Sbjct: 483 LFDFVFPGRLGTLPVFQNQFALPINIGGYANASNVQVQTAYKCACMLRDLISPYLLRRMK 542
Query: 823 MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQ 882
++V DLP K+ V+ KL+PLQR+ Y+ F L G ++ N K + G L +
Sbjct: 543 LDVA-ADLPKKSEQVLFCKLTPLQRKAYQDF--LQGSDMQKILNGK--RQMLYGIDILRK 597
Query: 883 IWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKD 942
I NHP ++ +RE +L K D
Sbjct: 598 ICNHPDLV---------TRE--------------------------YLLHKED------- 615
Query: 943 WWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 1002
+ Y + + SGK+ ++ +LT+ G ++L+FSQ+ LD++E L LP
Sbjct: 616 --------YNYGDPEKSGKLKVIRALLTLWKKQGHRTLLFSQTRQMLDILEIGLKDLP-- 665
Query: 1003 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 1062
+ R+DG T + RQ LV+ FN+ N+ L++TR G LG+NL A+
Sbjct: 666 ---------DVHYCRMDGSTSIALRQDLVDNFNK--NEYFDVFLLTTRVGGLGVNLTGAD 714
Query: 1063 RVIIVDGSWNPTYDLQAIYRAWRCMDKQ 1090
RVI+ D WNP+ D QA RAWR K+
Sbjct: 715 RVILFDPDWNPSTDAQARERAWRLGQKK 742
>sp|Q9Y620|RA54B_HUMAN DNA repair and recombination protein RAD54B OS=Homo sapiens GN=RAD54B
PE=1 SV=1
Length = 910
Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 158/548 (28%), Positives = 262/548 (47%), Gaps = 95/548 (17%)
Query: 556 VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 615
V I + L+ HQ GI F++E ++ +R + G ILA MGLGKT Q I+ +
Sbjct: 286 VVIDPYLVYHLRPHQKEGIIFLYECVM-GMRM----NGRCGAILADEMGLGKTLQCISLI 340
Query: 616 YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 671
+T G ++ LIVTP ++++NWK+EF KW SE +++F V +D + E
Sbjct: 341 WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSER--IKIFT---VDQDHKVE 395
Query: 672 LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 730
K V +I Y R+L K++K D+L+CDE H +KN+
Sbjct: 396 EFIK-SIFYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 439
Query: 731 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 790
TT AL + C++RI LTG+P+QN+L E++ ++DFV G LGS +R ++ PI
Sbjct: 440 AIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 499
Query: 791 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 850
+ +++ E+ ++ +R+ L F+ R ++ K LPPK V+ + LQ LY
Sbjct: 500 REPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELY 559
Query: 851 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 903
++ L+ L G + AL ++ NHP +L + S ++
Sbjct: 560 RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 604
Query: 904 AEDSSS----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 959
E SS+ +E Y ++ P + N L F +K+ S
Sbjct: 605 KECSSTCDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------S 641
Query: 960 GKMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1017
GK+ +L +L + + +K ++ S TL+++ Q + G + R
Sbjct: 642 GKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYAYTR 689
Query: 1018 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1077
LDG+T S+RQ++V+ FN + L+S++AG +G+NL + +I+ D WNP D+
Sbjct: 690 LDGQTPISQRQQIVDGFNSQ-HSSFFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDI 748
Query: 1078 QAIYRAWR 1085
QA+ R WR
Sbjct: 749 QAMSRVWR 756
>sp|Q6PFE3|RA54B_MOUSE DNA repair and recombination protein RAD54B OS=Mus musculus GN=Rad54b
PE=2 SV=1
Length = 886
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 157/544 (28%), Positives = 258/544 (47%), Gaps = 87/544 (15%)
Query: 556 VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 615
V I + L+ HQ GI F++E ++ +R V G ILA MGLGKT Q I+ +
Sbjct: 264 VVIDPHLVHHLRPHQKDGIIFLYECVM-GMRAVGK----CGAILADEMGLGKTLQCISLI 318
Query: 616 YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 671
+T G ++ LIVTP ++++NW++EF KW SE +++F V +D + E
Sbjct: 319 WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSER--IKIFT---VDQDHKVE 373
Query: 672 LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 731
V +I Y ++ + + I L L+CDE H +KN+
Sbjct: 374 EFIN-STFHSVLIISYEML--------LRSLDQIKTIPFGL------LICDEGHRLKNSS 418
Query: 732 ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 791
TT AL + C++ + LTG+P+QN+L E++ +VDFV G LGS +R ++ PI +
Sbjct: 419 IKTTTALSSLSCEKTVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRKIYEEPIIISR 478
Query: 792 HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 851
+S+ E+ ++ +R+ L F+ R V+ K LPPK V+ + LQ LY+
Sbjct: 479 EPSSSKEERELGERRATELTRLTGRFILRRTQEVINKYLPPKIENVVFCRPGALQIELYR 538
Query: 852 RFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDA 904
+ L L G + + AL ++ NHP +L + S +
Sbjct: 539 KLLRSQSVRFCLQGLLEN--------SAHLICIGALKKLCNHPCLL-------FSSVKGK 583
Query: 905 EDSSS-DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMV 963
E SSS +EN + N+ G ++ F G N F +++ SGK+
Sbjct: 584 EFSSSCEENEERNLCQGL----LSVFPAGYNPLQFSEEE----------------SGKLQ 623
Query: 964 LLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 1021
+L+ +L + + +K ++ S TL+++E + G RLDG+
Sbjct: 624 VLVKLLAVIHELRPTEKVILVSNYRQTLNVLEEVCK------------RHGYACARLDGQ 671
Query: 1022 TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 1081
T S+RQ +V+ FN + L+S++AG +G+NL + +I+ D WNP D+QA+
Sbjct: 672 TPVSQRQHIVDSFNSKYSTDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMS 730
Query: 1082 RAWR 1085
R WR
Sbjct: 731 RVWR 734
>sp|Q09772|RDH54_SCHPO Meiotic recombination protein rdh54 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rdh54 PE=1 SV=3
Length = 811
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 158/546 (28%), Positives = 251/546 (45%), Gaps = 101/546 (18%)
Query: 556 VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 615
V I +S L +HQ G+ F+++ ++ G G ILA MGLGKT Q I +
Sbjct: 195 VVIDPFLSKHLYSHQREGVSFLYDCLLG-----MEGKCGYSAILADEMGLGKTLQTITVV 249
Query: 616 YTAMRSVNLGLRT-----ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA 670
+T ++ R+ A++V PV +L NW+ EF W E + V++ R A
Sbjct: 250 WTLLKQSYYANRSSTINNAMVVAPVTLLKNWENEFYNWLGHE--RIHVYI------ARCA 301
Query: 671 ELLAKWRAKG--GVFLIGY----TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 724
E ++ + + + GY T RN G + D+L+CDEA
Sbjct: 302 EDFQEFTSNKTYSIIITGYETVCTYLRNYGCGIDI-----------------DLLICDEA 344
Query: 725 HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 784
H +K+ + T L ++K ++R+ LTG+PLQN+L EY+ MV+F+ G LG+ + F+ +++
Sbjct: 345 HRLKSMSSQTWITLNKLKTRKRLLLTGTPLQNDLSEYFSMVNFIIPGSLGTPNSFKAQYE 404
Query: 785 NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP 844
PI + N++S D+ + R L+E F R N++ K LPP+T V+ +K +
Sbjct: 405 RPILRSRSMNASSRDISLGAARLQRLFEFTSNFTLRRKANILAKHLPPRTDIVLFIKPTH 464
Query: 845 LQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDA 904
Q +Y LD GF S+ + + L++I N +L R +
Sbjct: 465 QQENVYGHVLD--GFK----SSVDQKGYYLKILTRLSKICNSTILL----------RNEK 508
Query: 905 EDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVL 964
E+ S E D +V F+++ N LL S K+ +
Sbjct: 509 ENFLSTELQDKHV---------------------FEQE--NMLLS---------SSKLQI 536
Query: 965 LLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTES 1024
L +L K+++ SQ TL+LIE +LS L + +L G T
Sbjct: 537 LAALLKSFQRGCQKAVIVSQYKETLELIELFLSIL------------HVRFCKLLGSTPF 584
Query: 1025 SERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAW 1084
SER +V FN K L+S++AG G+NL + R+II + SWNP DLQA+ R +
Sbjct: 585 SERDLIVHNFNTSSFKEFSVLLLSSKAGGCGLNLTGSTRLIIYEPSWNPAQDLQALSRIY 644
Query: 1085 RCMDKQ 1090
R K+
Sbjct: 645 RSGQKR 650
>sp|P32863|RAD54_YEAST DNA repair and recombination protein RAD54 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RAD54 PE=1
SV=1
Length = 898
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 182/640 (28%), Positives = 287/640 (44%), Gaps = 119/640 (18%)
Query: 475 KKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSK-SKLMNSVTLDGDLSAGASI 533
K +R +L D+E E K+K A S+ V K +K++ ++G +
Sbjct: 237 KPLRELLGDSENSAENKKKFA----------SVPVVIDPKLAKILRPHQVEG-------V 279
Query: 534 EVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDK 593
L +TG +V + EA +S LK+ E + +K + ++
Sbjct: 280 RFLYRCVTG----LVMKDYLEAEAFNTSSEDPLKSD---------EKALTESQKTEQNNR 326
Query: 594 G-LGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLR---TALIVTPVNVLHNWKQEFMKWR 649
G GCI+A MGLGKT Q IA ++T +R G R +IV P ++++NW E +KW
Sbjct: 327 GAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWL 386
Query: 650 -PSELKPLRVFMLEDV---SRDRRAELLAKWRAKGG------VFLIGY-TAFRNLSFGKH 698
P+ L PL V + ++ + W G V +I Y T RN+
Sbjct: 387 GPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVD---Q 443
Query: 699 VKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNL 758
+K+ N+ +++ DE H +KN + T AL + C RR+ L+G+P+QN+L
Sbjct: 444 LKNCNVG------------LMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDL 491
Query: 759 MEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV 818
EY+ ++ F G LGS EFR F+NPI G+ ++T +++ + L + F+
Sbjct: 492 SEYFALLSFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFI 551
Query: 819 QRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSFFA 875
R +++ K LP K VI V L PLQ LY + + ++ ++ +R
Sbjct: 552 IRRTNDILAKYLPCKYEHVIFVNLKPLQNELYNKLIKSREVKKVVKGVGGSQPLR----- 606
Query: 876 GYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKND 935
L ++ NHP +L E ++ + DYN+ G K R++
Sbjct: 607 AIGILKKLCNHPNLLNFED-------EFDDEDDLELPDDYNMP-GSKARDV--------- 649
Query: 936 DGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLIEF 994
+ YS K +L L + + DK ++ S TLDLIE
Sbjct: 650 -------------------QTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIE- 689
Query: 995 YLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSL 1054
K+ R K RLDG ++RQKLV+RFN+P + L+S++AG
Sbjct: 690 ---KMCR--------YKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEF-IFLLSSKAGGC 737
Query: 1055 GINLHSANRVIIVDGSWNPTYDLQAIYRAWRCMDKQSQFL 1094
GINL ANR+I++D WNP D QA+ R WR K+ F+
Sbjct: 738 GINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFI 777
>sp|Q9U7E0|ATRX_CAEEL Transcriptional regulator ATRX homolog OS=Caenorhabditis elegans
GN=xnp-1 PE=1 SV=1
Length = 1359
Score = 187 bits (475), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 150/481 (31%), Positives = 225/481 (46%), Gaps = 91/481 (18%)
Query: 480 ILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDA 539
I+D ++L +ET EKER++RL+ Q +F+ L L L+ +S L
Sbjct: 378 IMDSSKLQKETIDAERAEKERRKRLEKKQKEFNGIV-LEEGEDLTEMLTGTSSQRKLKSV 436
Query: 540 ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 599
+ + V E+ ++ V + +S+ LK HQ GI+FM++ +S+ ++ + +G G IL
Sbjct: 437 VLDPDSSTVDEESKKPVEVHNSLVRILKPHQAHGIQFMYDCACESLDRLDT--EGSGGIL 494
Query: 600 AHTMGLGKTFQVIAFLYTAMRSVNLG--LRTALIVTPVNVLHNWKQEFMKW---RPSELK 654
AH MGLGKT QVI FL+T + +G + L+V P NV+ NW +EF KW EL
Sbjct: 495 AHCMGLGKTLQVITFLHTVLMHEKIGEKCKRVLVVVPKNVIINWFKEFQKWLVDNDEELD 554
Query: 655 PLRVFMLEDVS--RDRRAELLAKWRAK--GGVFLIGYTAFRNLSFGKHVKD--------- 701
+ V L+ DRR L A W + V +IGY FR L+ K
Sbjct: 555 TIDVNELDSYKTIEDRRRALKA-WHSSKTPSVMIIGYDLFRILTVEDDPKKKKPKNRNRR 613
Query: 702 -RNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLM 759
+ LQ+ GPD++VCDEAH +KN + ++ + ++ +RRI LTG+PLQNNLM
Sbjct: 614 LEKAKEDFRKYLQNPGPDMVVCDEAHKLKNDDSALSKCMVKILTKRRICLTGTPLQNNLM 673
Query: 760 EYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHIL--------- 810
EY+CMV+FV+ G LG+ EF NRF N I G+ +++ +V M +R H+L
Sbjct: 674 EYHCMVNFVKPGLLGTKTEFANRFVNIINRGRTKDASPLEVSFMKRRCHVLYDHLKKCVD 733
Query: 811 --------------------YEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 850
V+ + Q LY
Sbjct: 734 RKDYRVLTEAIPPKQEYVIN-----------------------------VRQTERQCALY 764
Query: 851 KRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK---DKGYPSREDAEDS 907
FL ND V + + K Y ++IW HP L L + ++ REDAE+
Sbjct: 765 NAFL------NDIVGDSGLSKRLLPDYHMFSRIWTHPYQLVLHEQRMERERVMREDAEEE 818
Query: 908 S 908
+
Sbjct: 819 A 819
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 91/153 (59%), Gaps = 14/153 (9%)
Query: 947 LLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLS--------- 997
L+ E + S K++LL++I+ C +GDK LVFSQS+ +L LI+ L
Sbjct: 934 LVKEEDRDDFALSNKLILLVEIIKKCEEIGDKLLVFSQSLESLTLIKRMLEYMAGTGQWF 993
Query: 998 -----KLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 1052
L G++ W +G+D+ +DG +S +R + FN+PLN R + LISTRAG
Sbjct: 994 ADGHEALNAEGEETWSWLEGEDYMTIDGSVQSGKRDAVQTSFNDPLNLRARLMLISTRAG 1053
Query: 1053 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWR 1085
SLG N+ +ANRVII D WNP++D Q+++R +R
Sbjct: 1054 SLGTNMVAANRVIIFDACWNPSHDTQSLFRVYR 1086
>sp|P40352|RAD26_YEAST DNA repair and recombination protein RAD26 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RAD26 PE=1
SV=1
Length = 1085
Score = 186 bits (473), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 163/577 (28%), Positives = 251/577 (43%), Gaps = 114/577 (19%)
Query: 546 NVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGL 605
N+ K +IP I + L +Q +++++E Q+ G I+ MGL
Sbjct: 277 NIPDAKLNSQFKIPGEIYSLLFNYQKTCVQWLYELYQQNC----------GGIIGDEMGL 326
Query: 606 GKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 665
GKT QVIAF+ A+ L LIV P V+ W EF W P PLR +L +
Sbjct: 327 GKTIQVIAFI-AALHHSGLLTGPVLIVCPATVMKQWCNEFQHWWP----PLRTVILHSMG 381
Query: 666 RDRRAELLAKWRAKGGVFLI--------GYTAFRNLSFGKHVKDR--NMAREICHALQDG 715
++ K LI Y ++N + K + ++ + I + DG
Sbjct: 382 SGMASDQKFKMDENDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDG 441
Query: 716 PDIL---------------------VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPL 754
++ V DE H I+N ++ + K++K RI L+G+P+
Sbjct: 442 HILITTYVGLRIHSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPI 501
Query: 755 QNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQL 814
QNNL E + + DF+ G LG+ F+ +F PI G + N+T+ V+ + + L + +
Sbjct: 502 QNNLTELWSLFDFIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLI 561
Query: 815 KGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFF 874
++ R V KDLP K V+ KL+ QR Y F LH +++ N K ++
Sbjct: 562 SPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRSKYLEF--LHSSDLNQIQNGK--RNVL 617
Query: 875 AGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKN 934
G L +I NHP +L + + N DY G+ R
Sbjct: 618 FGIDILRKICNHPDLL--------------DRDTKRHNPDY----GDPKR---------- 649
Query: 935 DDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEF 994
SGKM ++ +L + G K+L+F+QS LD++E
Sbjct: 650 ------------------------SGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEE 685
Query: 995 YLS-KLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGS 1053
++S K P ++ R+DG T RQ LV+RFN N+ L++TR G
Sbjct: 686 FISTKDPDLSHL--------NYLRMDGTTNIKGRQSLVDRFN---NESFDVFLLTTRVGG 734
Query: 1054 LGINLHSANRVIIVDGSWNPTYDLQAIYRAWRCMDKQ 1090
LG+NL ANR+II D WNP+ D+QA RAWR K+
Sbjct: 735 LGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKR 771
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 162/552 (29%), Positives = 246/552 (44%), Gaps = 102/552 (18%)
Query: 546 NVVREKGEEAVRIPSS-ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 604
NV E+ + PS + LK +Q+ G+++M V + L ILA MG
Sbjct: 746 NVAHRIKEDIKKQPSILVGGTLKDYQIKGLQWM----------VSLFNNHLNGILADEMG 795
Query: 605 LGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV 664
LGKT Q I+ L N+ L++ P++ L NW EF KW P+ LR +
Sbjct: 796 LGKTIQTISLLTYLYEMKNIR-GPYLVIVPLSTLSNWSSEFAKWAPT----LRTISFKGS 850
Query: 665 SRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI--CHALQDGPDILVCD 722
+R+A+ AK RA G F + T F + +K+R + ++ H ++ D
Sbjct: 851 PNERKAKQ-AKIRA--GEFDVVLTTFEYI-----IKERALLSKVKWVH--------MIID 894
Query: 723 EAHMIKNTRADTTQALK-QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 781
E H +KN ++ + L R+ LTG+PLQNNL E + +++FV S F
Sbjct: 895 EGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDE 954
Query: 782 RFQNPIEN--GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVIT 839
F P N GQ SE+ ++ R L++ L+ F+ R V+K+LP K V+
Sbjct: 955 WFNTPFANTGGQDKIELSEEETLLVIRR--LHKVLRPFLLRRLKKDVEKELPDKVEKVVK 1012
Query: 840 VKLSPLQRRLYKRFLDLHGFTNDRVSNEKI--RKSFFAGYQALAQIWNHPGILQLTKDKG 897
K+S LQ+ +Y++ L +N+K+ + F L +I NHP + + +D+
Sbjct: 1013 CKMSALQQIMYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQI 1072
Query: 898 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 957
P+RE ND D W
Sbjct: 1073 NPTRE-----------------------TND-------------DIWR------------ 1084
Query: 958 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 1017
+GK LL IL G + L+F Q +D++E +L + + R
Sbjct: 1085 VAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYI------------NIKYLR 1132
Query: 1018 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 1077
LDG T+S ER +L+ FN P ++ + C ++STRAG LG+NL +A+ VII D WNP DL
Sbjct: 1133 LDGHTKSDERSELLRLFNAPDSEYL-CFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDL 1191
Query: 1078 QAIYRAWRCMDK 1089
QA RA R K
Sbjct: 1192 QAQDRAHRIGQK 1203
>sp|A2BGR3|ERC6L_DANRE DNA excision repair protein ERCC-6-like OS=Danio rerio GN=ercc6l PE=1
SV=1
Length = 1451
Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 157/559 (28%), Positives = 250/559 (44%), Gaps = 111/559 (19%)
Query: 565 KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 624
KL HQ G+ F++ ++ + RK G ILA MGLGKT QVI+FL + M L
Sbjct: 104 KLYDHQKEGVAFLY-SLYRDGRK--------GGILADDMGLGKTIQVISFL-SGMYDAEL 153
Query: 625 GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFL 684
T L+V P +++ NW +EF KW P +RV S+ R L + + KGGV +
Sbjct: 154 ANHT-LLVMPTSLIKNWVREFAKWTPG----MRVKEFHGSSKTERNRNLERIQRKGGVII 208
Query: 685 IGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQ 744
Y N N RE D ++ DEAH IK + T ++ + +
Sbjct: 209 TTYQMLIN---NYEQLGSNGHREFKW------DYVILDEAHKIKTSSTKTAKSAHAIPAK 259
Query: 745 RRIALTGSPLQNNLMEYYCMVDFVREG-FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 803
R+ LTG+P+QNNL E + + DF +G LG+S F+ ++NPI + ++T + +
Sbjct: 260 NRVLLTGTPVQNNLREMWALFDFACQGSLLGTSKTFKTEYENPITRAREKDATPGEKALG 319
Query: 804 NQRSHILYEQLKG-FVQRMDMNVVKK-------------------------DLPP---KT 834
+ S L + +K F++R +V +K ++P K
Sbjct: 320 LRISQNLTDIIKPYFLRRTKADVQQKKLKLEEGFEEEEDQENKCPNAREGVEMPSLTRKN 379
Query: 835 VFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP------G 888
++ LS +Q +Y +F+ L + +S A L ++ +HP
Sbjct: 380 DLIVWTYLSSVQEDIYNKFISLDQIKELLTTT----RSPLAELTVLKKLCDHPRLLSQRA 435
Query: 889 ILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL 948
++QL ++G D+E SDE+ I D +
Sbjct: 436 VIQLGLERG----SDSELVHSDESESAVSQI--------------------------DNI 465
Query: 949 HEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL 1008
+HT ++ SGK+ ++ ++ G ++L+FSQS LD++E L
Sbjct: 466 SDHTL--IEESGKLQFVVSLMECLREEGHRTLIFSQSRKMLDIMERVLR----------- 512
Query: 1009 WKKGKDWYRLDGR-TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 1067
+ RLDG T+ +ER+K + F +KR L++T+ G +GI L ANRV+I
Sbjct: 513 -NRNFRLLRLDGTVTQLAEREKRISLFQ--TDKRYTIFLLTTQVGGVGITLTGANRVVIF 569
Query: 1068 DGSWNPTYDLQAIYRAWRC 1086
D SWNP D QA+ RA+R
Sbjct: 570 DPSWNPATDAQAVDRAYRI 588
>sp|Q8BHK9|ERC6L_MOUSE DNA excision repair protein ERCC-6-like OS=Mus musculus GN=Ercc6l
PE=1 SV=1
Length = 1240
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 156/552 (28%), Positives = 249/552 (45%), Gaps = 93/552 (16%)
Query: 565 KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 624
KL HQ GI F++ K G KG ILA MGLGKT Q+IAFL + M +L
Sbjct: 96 KLFEHQKEGIAFLYS-------LYKDGRKG--GILADDMGLGKTVQIIAFL-SGMFDASL 145
Query: 625 GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFL 684
+ L++ P N+++ W EF KW P +RV S+ R L + + + GV +
Sbjct: 146 -VNHVLLIMPTNLINTWVNEFAKWTPG----MRVKTFHGSSKSERTRSLTRIQQRNGVVI 200
Query: 685 IGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQ 744
Y L+ + + N + D ++ DEAH IK+ + + +
Sbjct: 201 TTYQML--LNNWQQLASFNGQAFVW-------DYVILDEAHKIKSASTKSAVCARAIPAS 251
Query: 745 RRIALTGSPLQNNLMEYYCMVDFVREG-FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 803
R+ LTG+P+QNNL E + + DF +G LG+ F+ +++PI + ++T + +
Sbjct: 252 NRLLLTGTPVQNNLQELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEKALG 311
Query: 804 NQRSHILYEQLKGFVQRM---DMNVVKKDLPP---------------------KTVFVIT 839
+ S L E +K + R ++ K D P K ++
Sbjct: 312 LKISENLMEIIKPYFLRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDLIVW 371
Query: 840 VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 899
++L PLQ +Y++F+ L + +S A L ++ +HP +L +
Sbjct: 372 IRLLPLQEEIYRKFVSLDHIKELLMET----RSPLAELGVLKKLCDHPRLLSARACRLL- 426
Query: 900 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 959
+ A S+ DEN +V NMN D L + T + S
Sbjct: 427 NLGTATFSAQDENEQEDV------SNMNSI----------------DHLPDKTL--IQES 462
Query: 960 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1019
GKM+ L+ +L + G ++LVFSQSI L++IE L + K +K R+D
Sbjct: 463 GKMIFLMSLLERLQDEGHQTLVFSQSIKILNIIERLL--------KNKHFKT----LRID 510
Query: 1020 GR-TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1078
G T ER+K ++ F + NK L++T+ G +G+ L +A RV+I D SWNP D Q
Sbjct: 511 GTVTHLWEREKRIQLFQQ--NKEYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQ 568
Query: 1079 AIYRAWRCMDKQ 1090
A+ R +R K+
Sbjct: 569 AVDRVYRIGQKE 580
>sp|Q2NKX8|ERC6L_HUMAN DNA excision repair protein ERCC-6-like OS=Homo sapiens GN=ERCC6L
PE=1 SV=1
Length = 1250
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 152/558 (27%), Positives = 253/558 (45%), Gaps = 105/558 (18%)
Query: 565 KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 624
+L HQ GI F++ ++ + RK G ILA MGLGKT Q+IAFL + M +L
Sbjct: 95 QLFEHQKEGIAFLY-SLYRDGRK--------GGILADDMGLGKTVQIIAFL-SGMFDASL 144
Query: 625 GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFL 684
+ L++ P N+++ W +EF+KW P +RV S+D R L + + + GV +
Sbjct: 145 -VNHVLLIMPTNLINTWVKEFIKWTPG----MRVKTFHGPSKDERTRNLNRIQQRNGVII 199
Query: 685 IGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRADTTQALKQVKC 743
Y N N + Q+ D ++ DEAH IK + + + +
Sbjct: 200 TTYQMLIN----------NWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPA 249
Query: 744 QRRIALTGSPLQNNLMEYYCMVDFVREG-FLGSSHEFRNRFQNPIENGQHTNSTSEDVKI 802
R+ LTG+P+QNNL E + + DF +G LG+ F+ ++NPI + ++T + +
Sbjct: 250 SNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKAL 309
Query: 803 MNQRSHILYEQLKG-FVQRMDMNVVKK--------------------DLPP---KTVFVI 838
+ S L +K F++R +V KK ++P K +I
Sbjct: 310 GFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEARLNEKNPDVDAICEMPSLSRKNDLII 369
Query: 839 TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK---- 894
++L PLQ +Y++F+ L + +S A L ++ +HP +L
Sbjct: 370 WIRLVPLQEEIYRKFVSLDHIKELLMET----RSPLAELGVLKKLCDHPRLLSARACCLL 425
Query: 895 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYK 954
+ G S +D + ++D+ + DD ++
Sbjct: 426 NLGTFSAQDGNEGEDSPDVDH--------------IDQVTDDTLMEE------------- 458
Query: 955 ELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 1014
SGKM+ L+D+L + G ++LVFSQS L++IE L + + +K
Sbjct: 459 ----SGKMIFLMDLLKRLRDEGHQTLVFSQSRQILNIIERLL--------KNRHFKT--- 503
Query: 1015 WYRLDGR-TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 1073
R+DG T ER+K + F + NK L++T+ G +G+ L +A RV+I D SWNP
Sbjct: 504 -LRIDGTVTHLLEREKRINLFQQ--NKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNP 560
Query: 1074 TYDLQAIYRAWRCMDKQS 1091
D QA+ R +R K++
Sbjct: 561 ATDAQAVDRVYRIGQKEN 578
>sp|A6QQR4|ERC6L_BOVIN DNA excision repair protein ERCC-6-like OS=Bos taurus GN=ERCC6L PE=2
SV=1
Length = 1242
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 154/553 (27%), Positives = 256/553 (46%), Gaps = 93/553 (16%)
Query: 565 KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 624
+L +Q GI F++ S+ + D G ILA MGLGKT Q+IAFL + M +L
Sbjct: 95 QLYEYQKEGIAFLY-----SLYR----DGRRGGILADDMGLGKTVQIIAFL-SGMFDASL 144
Query: 625 GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFL 684
+ L++ P +++ W +EF+KW P +RV S+D R L + + + GV +
Sbjct: 145 -VNHVLLIMPTSLISTWLREFVKWTPG----MRVKTFHGPSKDERTRNLCRIQQRNGVII 199
Query: 685 IGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQ 744
Y N + + N + D ++ DEAH IK++ + + +
Sbjct: 200 TTYQMLIN--NWQQLSSLNGQEFLW-------DYVILDEAHKIKSSSTKSAICARAIPAS 250
Query: 745 RRIALTGSPLQNNLMEYYCMVDFVREG-FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 803
RI LTG+P+QNNL E + + DF +G LG+ F+ ++NPI + ++T + +
Sbjct: 251 NRILLTGTPIQNNLQELWSLFDFACQGSLLGTLRTFKMEYENPITRAREKDATPGEKALG 310
Query: 804 NQRSHILYEQLKG-FVQRMDMNVVKK--------------------DLPP---KTVFVIT 839
+ S L +K F++R V KK ++P K +I
Sbjct: 311 FKISENLMAIIKPYFLRRTKEEVQKKKSSNPEVQLSEKSPDVGAICEMPSLSRKNDLIIW 370
Query: 840 VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 899
++L PLQ +Y++F+ L + +S A L ++ +HP +L + G
Sbjct: 371 IRLVPLQEEIYRKFVSLDHIKELLMET----RSPLAELGVLKKLCDHPRLLS-ARACGLL 425
Query: 900 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 959
+ A+ S DE + GE ++ D + +DD ++ S
Sbjct: 426 NLGAAKFSVQDE------IEGEDSSDV-DHIDQISDDTLMEE-----------------S 461
Query: 960 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 1019
GKM+ L+D+L + G ++LVFSQS L++IE L + K+ R+D
Sbjct: 462 GKMLFLMDLLKKLRDEGHQTLVFSQSRRILNIIERLLK-----NRHFKIL-------RID 509
Query: 1020 GR-TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 1078
G T ER+K + F + NK L++T+ G +G+ L +A+RV+I D SWNP D Q
Sbjct: 510 GTITHLVEREKRISLFQQ--NKDYSVFLLTTQVGGVGLTLTAASRVVIFDPSWNPATDAQ 567
Query: 1079 AIYRAWRCMDKQS 1091
A+ R +R K++
Sbjct: 568 AVDRVYRIGQKEN 580
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus GN=Smarca5
PE=1 SV=1
Length = 1051
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 156/530 (29%), Positives = 242/530 (45%), Gaps = 107/530 (20%)
Query: 559 PSSIS-AKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 617
PS + KL+ +QV G+ ++ + + G+ ILA MGLGKT Q I+ L
Sbjct: 171 PSYVKWGKLRDYQVRGLNWL----------ISLYENGINGILADEMGLGKTLQTISLLGY 220
Query: 618 AMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLR-VFMLEDVSRDRRAELLAKW 676
N+ +++ P + LHNW EF KW P+ LR V ++ D +++RA +
Sbjct: 221 MKHYRNIP-GPHMVLVPKSTLHNWMSEFKKWVPT----LRSVCLIGD--KEQRAAFVR-- 271
Query: 677 RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 736
V L G S+ +K++++ ++ LV DEAH IKN ++ ++
Sbjct: 272 ----DVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRY------LVIDEAHRIKNEKSKLSE 321
Query: 737 ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 796
+++ K R+ LTG+PLQNNL E + +++F+ S+ +F + F TN+
Sbjct: 322 IVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFD--------TNNC 373
Query: 797 SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 856
D K++ +R H++ L+ F+ R V+K LPPK I V LS +QR Y R L
Sbjct: 374 LGDQKLV-ERLHMV---LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL-- 427
Query: 857 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYN 916
+ + I S AG ++ N ++QL K +P D + D +
Sbjct: 428 -------MKDIDILNS--AGKMDKMRLLNI--LMQLRKCCNHPYLFDGAEPGPPYTTDMH 476
Query: 917 VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMG 976
+V SGKMV+L +L G
Sbjct: 477 LVTN--------------------------------------SGKMVVLDKLLPKLKEQG 498
Query: 977 DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNE 1036
+ L+FSQ LD++E Y +W + ++ RLDG+T ERQ + +NE
Sbjct: 499 SRVLIFSQMTRVLDILEDYC-----------MW-RNYEYCRLDGQTPHDERQDSINAYNE 546
Query: 1037 PLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRC 1086
P N ++STRAG LGINL +A+ VI+ D WNP DLQA+ RA R
Sbjct: 547 P-NSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 595
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens GN=SMARCA5
PE=1 SV=1
Length = 1052
Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 155/530 (29%), Positives = 242/530 (45%), Gaps = 107/530 (20%)
Query: 559 PSSIS-AKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 617
PS + KL+ +QV G+ ++ + + G+ ILA MGLGKT Q I+ L
Sbjct: 172 PSYVKWGKLRDYQVRGLNWL----------ISLYENGINGILADEMGLGKTLQTISLLGY 221
Query: 618 AMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLR-VFMLEDVSRDRRAELLAKW 676
N+ +++ P + LHNW EF +W P+ LR V ++ D +++RA +
Sbjct: 222 MKHYRNIP-GPHMVLVPKSTLHNWMSEFKRWVPT----LRSVCLIGD--KEQRAAFVR-- 272
Query: 677 RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 736
V L G S+ +K++++ ++ LV DEAH IKN ++ ++
Sbjct: 273 ----DVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRY------LVIDEAHRIKNEKSKLSE 322
Query: 737 ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 796
+++ K R+ LTG+PLQNNL E + +++F+ S+ +F + F TN+
Sbjct: 323 IVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFD--------TNNC 374
Query: 797 SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 856
D K++ +R H++ L+ F+ R V+K LPPK I V LS +QR Y R L
Sbjct: 375 LGDQKLV-ERLHMV---LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL-- 428
Query: 857 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYN 916
+ + I S AG ++ N ++QL K +P D + D +
Sbjct: 429 -------MKDIDILNS--AGKMDKMRLLNI--LMQLRKCCNHPYLFDGAEPGPPYTTDMH 477
Query: 917 VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMG 976
+V SGKMV+L +L G
Sbjct: 478 LVTN--------------------------------------SGKMVVLDKLLPKLKEQG 499
Query: 977 DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNE 1036
+ L+FSQ LD++E Y +W + ++ RLDG+T ERQ + +NE
Sbjct: 500 SRVLIFSQMTRVLDILEDYC-----------MW-RNYEYCRLDGQTPHDERQDSINAYNE 547
Query: 1037 PLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRC 1086
P N ++STRAG LGINL +A+ VI+ D WNP DLQA+ RA R
Sbjct: 548 P-NSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRI 596
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1 SV=1
Length = 1120
Score = 170 bits (431), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 146/537 (27%), Positives = 241/537 (44%), Gaps = 110/537 (20%)
Query: 559 PSSI-SAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 617
PS + S KL+ +QV G+ ++ + + L ILA MGLGKT Q I+FL
Sbjct: 176 PSFVKSGKLRDYQVQGLNWL----------ISLHENKLSGILADEMGLGKTLQTISFL-G 224
Query: 618 AMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAK-- 675
+R V LI+ P + L NW++EF+KW P+ + V +L +D RA+++
Sbjct: 225 YLRYVKQIEGPFLIIVPKSTLDNWRREFLKWTPN----VNVLVLHG-DKDTRADIVRNII 279
Query: 676 WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 735
A+ V + Y ++++N + + +V DEAH IKN ++ +
Sbjct: 280 LEARFDVLITSYEMV--------IREKNALKRLAWQY------IVIDEAHRIKNEQSALS 325
Query: 736 QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 795
Q ++ + R+ +TG+PLQNNL E + +++F+ G S F F+ N+
Sbjct: 326 QIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQ--------NN 377
Query: 796 TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL- 854
+ +D +I+ Q+ H + L F+ R V+K L PK + V ++ +Q + YK L
Sbjct: 378 SEQDQEIVIQQLHSV---LNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLE 434
Query: 855 -DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 913
D+ N V + + L + NHP + + E ++DE++
Sbjct: 435 KDIDA-VNGAVGKREGKTRLLNIVMQLRKCCNHPYLFE--------GAEPGPPYTTDEHL 485
Query: 914 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCS 973
+N SGKM++L +L
Sbjct: 486 IFN------------------------------------------SGKMIILDKLLKRLK 503
Query: 974 NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVER 1033
G + L+FSQ LD++E Y + + ++ R+DG T ER + ++
Sbjct: 504 EKGSRVLIFSQMSRLLDILEDY------------CYFRDFEYCRIDGSTSHEERIEAIDE 551
Query: 1034 FNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRCMDKQ 1090
+N+P N L++TRAG LGINL +A+ VI+ D WNP DLQA+ RA R K+
Sbjct: 552 YNKP-NSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKK 607
>sp|B3LN76|RDH54_YEAS1 DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=RDH54 PE=3 SV=1
Length = 924
Score = 170 bits (430), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 152/569 (26%), Positives = 245/569 (43%), Gaps = 119/569 (20%)
Query: 566 LKAHQVVGIRFMWENIIQSIRK--------------VKSGDKGL-GCILAHTMGLGKTFQ 610
L+ HQ G++FM++ ++ R V D + GC+LA MGLGKT
Sbjct: 262 LRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLM 321
Query: 611 VIAFLYTAMRSVNLGLRTA---------------LIVTPVNVLHNWKQEFMKWRPSELKP 655
I ++T +R + + L+V PV ++ NWK+EF KW L
Sbjct: 322 SITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKW----LNL 377
Query: 656 LRVFMLEDVSR-----DRRA-ELLAKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMAREI 708
R+ +L SR D+ A K + V +IGY LS + + K++++
Sbjct: 378 SRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL--LSVSEELEKNKHLI--- 432
Query: 709 CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 768
D+LVCDE H +KN + LK + +R++ LTG+P+QN+L E++ ++DF+
Sbjct: 433 --------DMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFI 484
Query: 769 REGFLGSSHEFRNRFQNPIENGQHTNS--TSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 826
G LGS F+ RF PI + T + E ++ +RS + E K F+ R ++
Sbjct: 485 NPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAIL 544
Query: 827 KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 886
+K LPPKT ++ K Q +K L R++ S L ++ N
Sbjct: 545 EKYLPPKTDIILFCKPYSQQILAFKDILQGARLDFGRLT----FSSSLGLITLLKKVCNS 600
Query: 887 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 946
PG+ +G P + K D
Sbjct: 601 PGL-----------------------------VGSDP---------------YYKSHIKD 616
Query: 947 LLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 1005
+ +Y SGK+ +L+ +L + +K +V S TLD+IE ++
Sbjct: 617 TQSQDSYSRSLNSGKLRVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMN-------- 668
Query: 1006 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 1065
G RLDG + +R +V FN N + L+S ++G +G+NL A+R+I
Sbjct: 669 ----MAGMSHCRLDGSIPAKQRDSIVTSFNR--NPAIFGFLLSAKSGGVGLNLVGASRLI 722
Query: 1066 IVDGSWNPTYDLQAIYRAWRCMDKQSQFL 1094
+ D WNP+ DLQA+ R R K+ F+
Sbjct: 723 LFDNDWNPSVDLQAMSRIHRDGQKKPCFI 751
>sp|C7GQI8|RDH54_YEAS2 DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain JAY291) GN=RDH54 PE=3 SV=1
Length = 924
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 154/570 (27%), Positives = 247/570 (43%), Gaps = 121/570 (21%)
Query: 566 LKAHQVVGIRFMWENIIQSIRK--------------VKSGDKGL-GCILAHTMGLGKTFQ 610
L+ HQ G++FM++ ++ R V D + GC+LA MGLGKT
Sbjct: 262 LRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLM 321
Query: 611 VIAFLYTAMRSVNLGLRTA---------------LIVTPVNVLHNWKQEFMKWRPSELKP 655
I ++T +R + + L+V PV ++ NWK+EF KW L
Sbjct: 322 SITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKW----LNL 377
Query: 656 LRVFMLEDVSR-----DRRA-ELLAKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMAREI 708
R+ +L SR D+ A K + V +IGY LS + + K++++
Sbjct: 378 SRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL--LSVSEELEKNKHLI--- 432
Query: 709 CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 768
D+LVCDE H +KN + LK + +R++ LTG+P+QN+L E++ ++DF+
Sbjct: 433 --------DMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFI 484
Query: 769 REGFLGSSHEFRNRFQNPIENGQHTNS--TSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 826
G LGS F+ RF PI + T + E +K +RS + E K F+ R ++
Sbjct: 485 NPGILGSFASFKRRFIIPITRARDTANRYNEELLKKGEERSKEMIEITKRFILRRTNAIL 544
Query: 827 KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWN 885
+K LPPKT ++ K Q +K L R+ ++ S G L ++ N
Sbjct: 545 EKYLPPKTDIILFCKPYSQQILAFKDILQ-----GARLDFGQLTFSSSLGLITLLKKVCN 599
Query: 886 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 945
PG+ +G P + K
Sbjct: 600 SPGL-----------------------------VGSDP---------------YYKSHIK 615
Query: 946 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1004
D + +Y SGK+ +L+ +L + +K +V S TLD+IE ++
Sbjct: 616 DTQSQDSYSRSLNSGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMN------- 668
Query: 1005 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1064
G RLDG + +R +V FN N + L+S ++G +G+NL A+R+
Sbjct: 669 -----MAGMSHCRLDGSIPAKQRDSIVTSFNR--NPAIFGFLLSAKSGGVGLNLVGASRL 721
Query: 1065 IIVDGSWNPTYDLQAIYRAWRCMDKQSQFL 1094
I+ D WNP+ DLQA+ R R K+ F+
Sbjct: 722 ILFDNDWNPSVDLQAMSRIHRDGQKKPCFI 751
>sp|A6ZL17|RDH54_YEAS7 DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain YJM789) GN=RDH54 PE=3 SV=1
Length = 924
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 153/570 (26%), Positives = 247/570 (43%), Gaps = 121/570 (21%)
Query: 566 LKAHQVVGIRFMWENIIQSIRK--------------VKSGDKGL-GCILAHTMGLGKTFQ 610
L+ HQ G++FM++ ++ R V D + GC+LA MGLGKT
Sbjct: 262 LRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLM 321
Query: 611 VIAFLYTAMRSVNLGLRTA---------------LIVTPVNVLHNWKQEFMKWRPSELKP 655
I ++T +R + + L+V PV ++ NWK+EF KW L
Sbjct: 322 SITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKW----LNL 377
Query: 656 LRVFMLEDVSR-----DRRA-ELLAKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMAREI 708
R+ +L SR D+ A K + V +IGY LS + + K++++
Sbjct: 378 SRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL--LSVSEELEKNKHLI--- 432
Query: 709 CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 768
D+LVCDE H +KN + LK + +R++ LTG+P+QN+L E++ ++DF+
Sbjct: 433 --------DMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFI 484
Query: 769 REGFLGSSHEFRNRFQNPIENGQHTNS--TSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 826
G LGS F+ RF PI + T + E ++ +RS + E K F+ R ++
Sbjct: 485 NPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAIL 544
Query: 827 KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWN 885
+K LPPKT ++ K Q +K L R+ ++ S G L ++ N
Sbjct: 545 EKYLPPKTDIILFCKPYSQQILAFKDILQ-----GARLDFGQLTFSSSLGLITLLKKVCN 599
Query: 886 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 945
PG+ +G P + K
Sbjct: 600 SPGL-----------------------------VGSDP---------------YYKSHIK 615
Query: 946 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1004
D + +Y SGK+ +L+ +L + +K +V S TLD+IE ++
Sbjct: 616 DTQSQDSYSRSLNSGKLRVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMN------- 668
Query: 1005 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1064
G RLDG + +R +V FN N + L+S ++G +G+NL A+R+
Sbjct: 669 -----MAGMSHCRLDGSIPAKQRDSIVTSFNR--NPAIFGFLLSAKSGGVGLNLVGASRL 721
Query: 1065 IIVDGSWNPTYDLQAIYRAWRCMDKQSQFL 1094
I+ D WNP+ DLQA+ R R K+ F+
Sbjct: 722 ILFDNDWNPSVDLQAMSRIHRDGQKKPCFI 751
>sp|P38086|RDH54_YEAST DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RDH54 PE=1
SV=4
Length = 958
Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 153/570 (26%), Positives = 247/570 (43%), Gaps = 121/570 (21%)
Query: 566 LKAHQVVGIRFMWENIIQSIRK--------------VKSGDKGL-GCILAHTMGLGKTFQ 610
L+ HQ G++FM++ ++ R V D + GC+LA MGLGKT
Sbjct: 296 LRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLM 355
Query: 611 VIAFLYTAMRSVNLGLRTA---------------LIVTPVNVLHNWKQEFMKWRPSELKP 655
I ++T +R + + L+V PV ++ NWK+EF KW L
Sbjct: 356 SITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKW----LNL 411
Query: 656 LRVFMLEDVSR-----DRRA-ELLAKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMAREI 708
R+ +L SR D+ A K + V +IGY LS + + K++++
Sbjct: 412 SRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL--LSVSEELEKNKHLI--- 466
Query: 709 CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 768
D+LVCDE H +KN + LK + +R++ LTG+P+QN+L E++ ++DF+
Sbjct: 467 --------DMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFI 518
Query: 769 REGFLGSSHEFRNRFQNPIENGQHTNS--TSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 826
G LGS F+ RF PI + T + E ++ +RS + E K F+ R ++
Sbjct: 519 NPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAIL 578
Query: 827 KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWN 885
+K LPPKT ++ K Q +K L R+ ++ S G L ++ N
Sbjct: 579 EKYLPPKTDIILFCKPYSQQILAFKDILQ-----GARLDFGQLTFSSSLGLITLLKKVCN 633
Query: 886 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 945
PG+ +G P + K
Sbjct: 634 SPGL-----------------------------VGSDP---------------YYKSHIK 649
Query: 946 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1004
D + +Y SGK+ +L+ +L + +K +V S TLD+IE ++
Sbjct: 650 DTQSQDSYSRSLNSGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMN------- 702
Query: 1005 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1064
G RLDG + +R +V FN N + L+S ++G +G+NL A+R+
Sbjct: 703 -----MAGMSHCRLDGSIPAKQRDSIVTSFNR--NPAIFGFLLSAKSGGVGLNLVGASRL 755
Query: 1065 IIVDGSWNPTYDLQAIYRAWRCMDKQSQFL 1094
I+ D WNP+ DLQA+ R R K+ F+
Sbjct: 756 ILFDNDWNPSVDLQAMSRIHRDGQKKPCFI 785
>sp|B5VE38|RDH54_YEAS6 DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain AWRI1631) GN=RDH54 PE=3 SV=1
Length = 924
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 153/570 (26%), Positives = 247/570 (43%), Gaps = 121/570 (21%)
Query: 566 LKAHQVVGIRFMWENIIQSIRK--------------VKSGDKGL-GCILAHTMGLGKTFQ 610
L+ HQ G++FM++ ++ R V D + GC+LA MGLGKT
Sbjct: 262 LRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLM 321
Query: 611 VIAFLYTAMRSVNLGLRTA---------------LIVTPVNVLHNWKQEFMKWRPSELKP 655
I ++T +R + + L+V PV ++ NWK+EF KW L
Sbjct: 322 SITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKW----LNL 377
Query: 656 LRVFMLEDVSR-----DRRA-ELLAKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMAREI 708
R+ +L SR D+ A K + V +IGY LS + + K++++
Sbjct: 378 SRIGVLTLSSRNSPDMDKMAVRNFLKVQRIYQVLIIGYEKL--LSVSEELEKNKHLI--- 432
Query: 709 CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 768
D+LVCDE H +KN + LK + +R++ LTG+P+QN+L E++ ++DF+
Sbjct: 433 --------DMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFI 484
Query: 769 REGFLGSSHEFRNRFQNPIENGQHTNS--TSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 826
G LGS F+ RF PI + T + E ++ +RS + E K F+ R ++
Sbjct: 485 NPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAIL 544
Query: 827 KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWN 885
+K LPPKT ++ K Q +K L R+ ++ S G L ++ N
Sbjct: 545 EKYLPPKTDIILFCKPYSQQILAFKDILQ-----GARLDFGQLTFSSSLGLITLLKKVCN 599
Query: 886 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 945
PG+ +G P + K
Sbjct: 600 SPGL-----------------------------VGSDP---------------YYKSHIK 615
Query: 946 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 1004
D + +Y SGK+ +L+ +L + +K +V S TLD+IE ++
Sbjct: 616 DTQSQDSYSRSLNSGKLRVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMN------- 668
Query: 1005 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 1064
G RLDG + +R +V FN N + L+S ++G +G+NL A+R+
Sbjct: 669 -----MAGMSHCRLDGSIPAKQRDSIVTSFNR--NPAIFGFLLSAKSGGVGLNLVGASRL 721
Query: 1065 IIVDGSWNPTYDLQAIYRAWRCMDKQSQFL 1094
I+ D WNP+ DLQA+ R R K+ F+
Sbjct: 722 ILFDNDWNPSVDLQAMSRIHRDGQKKPCFI 751
>sp|P32333|MOT1_YEAST TATA-binding protein-associated factor MOT1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MOT1 PE=1 SV=1
Length = 1867
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 144/562 (25%), Positives = 243/562 (43%), Gaps = 75/562 (13%)
Query: 543 YIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHT 602
+I ++ + ++P +I A L+ +Q G+ W + L IL
Sbjct: 1249 FIQQMMDPSKAKPFKLPIAIKATLRKYQQDGVN--WLAFLNKYH--------LHGILCDD 1298
Query: 603 MGLGKTFQVIAFL----------YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE 652
MGLGKT Q I + Y RSV +LI+ P ++ +W+ EF ++ P
Sbjct: 1299 MGLGKTLQTICIIASDQYLRKEDYEKTRSVESRALPSLIICPPSLTGHWENEFDQYAPF- 1357
Query: 653 LKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHAL 712
L+V + R L + + + Y RN ++
Sbjct: 1358 ---LKVVVYAGGPTVRLT--LRPQLSDADIIVTSYDVARN--------------DLAVLN 1398
Query: 713 QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 772
+ + V DE H+IKN+++ +A+K++ R+ LTG+P+QNN++E + + DF+ GF
Sbjct: 1399 KTEYNYCVLDEGHIIKNSQSKLAKAVKEITANHRLILTGTPIQNNVLELWSLFDFLMPGF 1458
Query: 773 LGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPP 832
LG+ F+ RF PI +++ ++S++ + L++Q+ F+ R V DLPP
Sbjct: 1459 LGTEKMFQERFAKPIAASRNSKTSSKEQEAGVLALEALHKQVLPFMLRRLKEDVLSDLPP 1518
Query: 833 KTVFVITVKLSPLQRRLYKRFLDLHGFTNDR-VSNEKI---RKSFFAGYQALAQIWNHPG 888
K + +L LQ++LY F ++ + N +I ++ F Q + ++ NHP
Sbjct: 1519 KIIQDYYCELGDLQKQLYMDFTKKQKNVVEKDIENSEIADGKQHIFQALQYMRKLCNHPA 1578
Query: 889 ILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL 948
L +P +D +D + +I + LL
Sbjct: 1579 ---LVLSPNHPQLAQVQDYLKQTGLDLHDIINAP-----------------KLSALRTLL 1618
Query: 949 HEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL 1008
E E D K + ++L+F Q LD++E L K P
Sbjct: 1619 FECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDLFKKYMPSVT--- 1675
Query: 1009 WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVD 1068
+ RLDG + +RQK+V +FNE + + C L++T+ G LG+NL A+ VI V+
Sbjct: 1676 ------YMRLDGSIDPRDRQKVVRKFNE--DPSIDCLLLTTKVGGLGLNLTGADTVIFVE 1727
Query: 1069 GSWNPTYDLQAIYRAWRCMDKQ 1090
WNP DLQA+ RA R K+
Sbjct: 1728 HDWNPMNDLQAMDRAHRIGQKK 1749
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 156/532 (29%), Positives = 232/532 (43%), Gaps = 102/532 (19%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 621
+ KLK +Q+ G+++M + + L ILA MGLGKT Q I+ L T +
Sbjct: 413 VGGKLKEYQLRGLQWM----------ISLYNNHLNGILADEMGLGKTIQTIS-LITHLIE 461
Query: 622 VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG 681
L++ P++ L NW EF +W PS +K + + + R+A +
Sbjct: 462 KKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVK----IVYKGPPQVRKALHPQVRHSNFQ 517
Query: 682 VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQV 741
V L Y +KDR + I ++ DE H +KNT++ T L
Sbjct: 518 VLLTTYEYI--------IKDRPLLSRIKWI------YMIIDEGHRMKNTQSKLTNTLTTY 563
Query: 742 KCQR-RIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN--GQHTNSTSE 798
R R+ LTG+PLQNNL E + +++FV S F F P N GQ +E
Sbjct: 564 YSSRYRLILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTE 623
Query: 799 DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 858
+ ++ R L++ L+ F+ R V+ +LP K VI ++S LQ++LY + + HG
Sbjct: 624 EESLLVIRR--LHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQ-MKKHG 680
Query: 859 FTNDRVSNEKIRKSFFAGYQ----ALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 914
V + K K+ G Q L +I NHP + ED E S +
Sbjct: 681 MLY--VEDAKRGKTGIKGLQNTVMQLKKICNHPFVF-----------EDVERSIDPTGFN 727
Query: 915 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN 974
Y+++ W SGK LL IL
Sbjct: 728 YDML-------------------------WR------------VSGKFELLDRILPKLFR 750
Query: 975 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERF 1034
G + L+F Q ++++E YL + W+ + RLDG T++ +R KL+ F
Sbjct: 751 SGHRILMFFQMTQIMNIMEDYL--------HYRQWR----YLRLDGSTKADDRSKLLGVF 798
Query: 1035 NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRC 1086
N+P V L+STRAG LG+NL +A+ VII D WNP DLQA RA R
Sbjct: 799 NDP-TAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 849
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 166/534 (31%), Positives = 234/534 (43%), Gaps = 107/534 (20%)
Query: 562 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 621
+ LK +Q+ G+ +M + + L ILA MGLGKT Q IAF+ +
Sbjct: 865 VGGTLKDYQLKGLEWM----------LSLYNNNLNGILADEMGLGKTIQTIAFITYLIEK 914
Query: 622 VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG 681
N LI+ P++ L NW EF KW PS K + R L ++ R+
Sbjct: 915 KNQQ-GPFLIIVPLSTLTNWIMEFEKWAPSVKK-----IAYKGPPQLRKTLQSQIRSSN- 967
Query: 682 VFLIGYTAFRNLSFGKHVKDRNMAREI--CHALQDGPDILVCDEAHMIKNTRADTTQALK 739
F + T F + +KDR + I H ++ DE H IKNT++ T L
Sbjct: 968 -FNVLLTTFEYI-----IKDRPLLSRIKWVH--------MIIDEGHRIKNTQSKLTSTLS 1013
Query: 740 QV-KCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN--GQHTNST 796
Q R+ LTG+PLQNNL E + +++FV S F F P N GQ
Sbjct: 1014 TYYHSQYRLILTGTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGL 1073
Query: 797 SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 856
+E+ ++ + L++ L+ F+ R V+K+LP K VI LS LQ +LY++ +
Sbjct: 1074 NEEEALLIIKR--LHKVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQ-MKK 1130
Query: 857 HGFTNDRVSNEKIRKSFFAGYQ----ALAQIWNHPGILQLTKDKGYPSREDAEDSSSDEN 912
HG V EK K+ G Q L +I NHP I + E A D S
Sbjct: 1131 HGML--FVDGEK-GKTGIKGLQNTVMQLKKICNHPFIFE--------DVERAIDPS---- 1175
Query: 913 MDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC 972
G N D ++ +GK LL IL
Sbjct: 1176 -------------------GTNVDLLWRA-----------------AGKFELLDRILPKL 1199
Query: 973 SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVE 1032
G K+L+F Q + ++E YL + K WK + RLDG T+S +R L+
Sbjct: 1200 FLTGHKTLMFFQMTQIMTIMEDYL--------RSKNWK----YLRLDGSTKSDDRCSLLA 1247
Query: 1033 RFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRC 1086
+FN+P V ++STRAG LG+NL +A+ VII D WNP DLQA RA R
Sbjct: 1248 QFNDP-KSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRI 1300
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 403,492,619
Number of Sequences: 539616
Number of extensions: 17451249
Number of successful extensions: 62602
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 286
Number of HSP's that attempted gapping in prelim test: 59920
Number of HSP's gapped (non-prelim): 1966
length of query: 1097
length of database: 191,569,459
effective HSP length: 128
effective length of query: 969
effective length of database: 122,498,611
effective search space: 118701154059
effective search space used: 118701154059
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)