BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001344
(1096 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WP44|HASTY_ARATH Protein HASTY 1 OS=Arabidopsis thaliana GN=HST1 PE=1 SV=1
Length = 1202
Score = 1471 bits (3809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 735/1097 (67%), Positives = 885/1097 (80%), Gaps = 19/1097 (1%)
Query: 1 MSEIADPCEEWALKSQTAALVAEIVRREGINLWQELFPSLVSLSSKGPIQAELVSMMLRW 60
MSE+A+ E W LKSQ+AALVAEIVRREG + WQE+F L SLS++GP+QAELV M LRW
Sbjct: 97 MSEVANASENWPLKSQSAALVAEIVRREGPDRWQEIFTLLTSLSAQGPLQAELVLMTLRW 156
Query: 61 LPEDITVHNEDLEGDRRRLLLRGLTQSLPEILPLLYSLLERHFGAALSEVGRQQLDVAKQ 120
LPEDIT++N+DLEGDRRRLLLRGLTQSLPEILPLLY+LLERHFGAA+SE G Q D+AKQ
Sbjct: 157 LPEDITIYNDDLEGDRRRLLLRGLTQSLPEILPLLYNLLERHFGAAMSEAGMQHFDLAKQ 216
Query: 121 HAATVTATLNAINAYAEWAPLPDLAKYGIIHGCGFLLSSPDFRLHACEFFKLVSPRKGPA 180
HA V A LNAI AY EWAP+PDLA+YGI+ GC FLLSS DFRLHACE FKLV RK P+
Sbjct: 217 HADVVIACLNAIVAYTEWAPVPDLARYGILSGCSFLLSSSDFRLHACEVFKLVCSRKRPS 276
Query: 181 DASASEFESAMHDVFQILMKVSGEFLYRSGTSAGAIDESEFEFAEYICESMVSLGTSNLH 240
DAS +EF+SA+ ++FQIL S EFL RS +S+ ID+++++FA +CESM SLG++NL
Sbjct: 277 DASTAEFDSAISNLFQILTNASREFLCRSSSSSSVIDDNDYDFAVCMCESMASLGSTNLQ 336
Query: 241 CIAREDTILSMYLQQMLGYFQHFKIALHFQSLLFWLALMRDLMSKTKVAHSTGDGSTVNN 300
I+ + ++++YLQQMLG+FQHFK+ LHF++LLFWL+LMRDL+ K K A G +
Sbjct: 337 SISSDGGVMAVYLQQMLGFFQHFKLGLHFEALLFWLSLMRDLLPKPKAATYPSGGGSSTG 396
Query: 301 ADSGSGKVDSRKMRILSFLNDDISGAILDISFQRLVKREKAPG----TQGPLELWSDDFE 356
D S +VDS K + LS +NDDIS AILD+SFQR++K+EK P + GPLELWSD+FE
Sbjct: 397 GDDSSSQVDSEKKKTLSLINDDISSAILDVSFQRMLKKEKVPTGIALSLGPLELWSDEFE 456
Query: 357 GKGDFSQYRSRLLELVKFVASNKPLVAGVKVSERVMAIINSLLISTMPAQDLAVMESMQS 416
GKGDF YRS+LLEL+K AS+KPL++ K+SERV+ +I LL S P Q +AVM+S Q
Sbjct: 457 GKGDFGPYRSKLLELIKLTASHKPLISSTKISERVITLIKHLLASPAPLQHVAVMDSQQL 516
Query: 417 ALENVVSAVFDGSNQFGGANSEVQLSLSRIFEGLLRQLLSLKWTEPPLVVALGHYLDALG 476
AL+ +V+ +FDGSN+F G +SEV +L IFEGLL+QLLSLKW EP L+ HYLDA+G
Sbjct: 517 ALDCIVATLFDGSNEFAGGSSEVHYALRGIFEGLLQQLLSLKWNEPELMKVHVHYLDAMG 576
Query: 477 PFLKYYPDAVGGVISKLFELLTSLPFVFKDPSTNSARHARLQICTSFIRIAKTSDKSILP 536
PFLKY+PDAVG +I+KLFELLTSLP V KDP+T+++R ARLQICTSFIRIAK ++KS+LP
Sbjct: 577 PFLKYFPDAVGSLINKLFELLTSLPHVVKDPATSTSRAARLQICTSFIRIAKAAEKSVLP 636
Query: 537 HMKDIADTMAYLQREGRLLRGEHNLLGEAFLVMASAAGIQQQQEVLAWLLEPLSQQWMQL 596
HMK IADTM YL +EG LLRGEHN+LGEAFLVMAS+AG QQQQEVLAWLLEPLSQQW+Q
Sbjct: 637 HMKGIADTMGYLAKEGTLLRGEHNILGEAFLVMASSAGAQQQQEVLAWLLEPLSQQWIQP 696
Query: 597 EWQNNYLSEPLGLVRLCSDTSFMWSLFHTVTFFERALKRSGIRKANLNLQSSSAENSAVM 656
EWQNNYLS+P+GLVRLCS+TSFMWS++HTVTFFE+ALKRSG RK+NLN S++ S
Sbjct: 697 EWQNNYLSDPMGLVRLCSNTSFMWSIYHTVTFFEKALKRSGYRKSNLNTTSATTPAS--- 753
Query: 657 HPMASHLSWMLPPLLKLLRAIHSIWSPSISQLLPGEIKAAMTMSDAEQFSLLGEGNPKFS 716
HPMA HLSWMLPPLLKLLR +HS+WSPS+ Q LP E++AAMTM+DAE++SLLGE NPK S
Sbjct: 754 HPMAHHLSWMLPPLLKLLRVLHSLWSPSVFQTLPPEMRAAMTMTDAERYSLLGEANPKLS 813
Query: 717 RGAVAFADGSQLDTSKEGYGEPNESDIRNWLKGVRDSGYNVLGLSATIGDPFFKSLDSGS 776
+G +ADGS + +KEG E +ESDIRNWLKG+RD GYNVLGLS TIG+ FFK LD+
Sbjct: 814 KGVSVYADGS-FEGTKEGQAEASESDIRNWLKGIRDCGYNVLGLSTTIGETFFKCLDANY 872
Query: 777 VVVALMENIQSMEFRHIRQLVHSVLIHMVKFCPLDMWEFWLEKLLNPLFIHCQQVLSSSW 836
V +ALMEN+QSMEFRHIR +H+ + ++VK CP DMWE WL LL+PLFIHCQQ LSS+W
Sbjct: 873 VAMALMENLQSMEFRHIRLFIHTFITYIVKSCPADMWESWLGVLLHPLFIHCQQALSSAW 932
Query: 837 SSLMHE-----------VAGSDLKVEVMEEKLLRDLTREICSLLSTMASSGLNNGIPPIE 885
L+ E +GSD+K+EVMEEKLLRDLTREI +L STMAS GLN G+P +E
Sbjct: 933 PGLLQEGRAKVPDLFGIQSGSDMKLEVMEEKLLRDLTREIATLFSTMASPGLNTGVPVLE 992
Query: 886 QSGHFYRVDVLSLKDLDAFASNSMVGFLLKHKDLALPALQISLEAFTWTDGEAVTKVSSF 945
SGH RVD+ +L DL AF SNSMVGFLL HK +ALPALQI LE FTWTDGEA TKV F
Sbjct: 993 HSGHVGRVDMSTLTDLHAFRSNSMVGFLLNHKSVALPALQICLETFTWTDGEATTKVCYF 1052
Query: 946 CSAVVLLAIQSNNIELRQFVSKDLFSAIIRGLALESNAVISADLVGLCREIFIYMCDRDP 1005
C VVLLA +NN+ELR+FVSKD+FSA+IRGL +ESNA+ S DLV +CREIFIY+ DRDP
Sbjct: 1053 CGVVVLLAKLTNNVELREFVSKDMFSAVIRGLGMESNAINSPDLVNICREIFIYLSDRDP 1112
Query: 1006 APRQVLLSLPCITPQDLLAFEDALTKTASPREQKQHMRSLLVLGTGNNLKALAAQKSVNV 1065
APRQVLLSLPC+TP DL AFE+A KT+SP+EQKQ MRSLL+LGTGNNLKALAAQKS NV
Sbjct: 1113 APRQVLLSLPCLTPNDLHAFEEATAKTSSPKEQKQLMRSLLLLGTGNNLKALAAQKSQNV 1172
Query: 1066 ITNVSTRPRSSDNAPES 1082
ITNV+ R R +APE+
Sbjct: 1173 ITNVTARTRLPASAPET 1189
>sp|Q54PQ8|XPO5_DICDI Exportin-5 OS=Dictyostelium discoideum GN=xpo5 PE=3 SV=1
Length = 1135
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 243/1108 (21%), Positives = 453/1108 (40%), Gaps = 176/1108 (15%)
Query: 13 LKSQTAALVAEIVRREGINLWQELFPSLVSLSSKGPIQAELVSMMLRWLPEDITVH---- 68
+K + ++ ++++R+ W L SL+ +S Q ELV LP DI
Sbjct: 107 IKEKLVTILVDVIKRDWPQRWMNLLTSLIEISKISDTQTELVLSTFGLLPHDIIFDTGST 166
Query: 69 NEDLEGDRRRLLLRGLTQSLPEILPLLYSLLERHFG--AALSEVGRQQLDVAKQHAATVT 126
++ L RR+ L+ G+ ++ + Y LLE + + KQ +
Sbjct: 167 SQVLSDQRRKDLMAGINLAVTSLFEYFYQLLESKYTQYKQPTPATTTTPQQTKQVIHLIN 226
Query: 127 ATLNAINAYAEWAPLPDLAKYGIIH-GCGFLLSSPDFRLHACEFFKLVSPRKGPADASAS 185
L + +Y EW P + + + C +L P FR+ ACE L RKG D
Sbjct: 227 VLLTTLRSYIEWVPSKVIFDHKLDQIFCQLILDVP-FRMGACENLILFLGRKGRPDERIE 285
Query: 186 EFESAMHDVFQIL--MKVSGEFLYRSGTSAGAIDESEFEFAEYICESMVSLGTSNLHCIA 243
++ + + L +K++ +F E ++ F + I +++ LGT +L+
Sbjct: 286 LIQTPFNFMENFLNSIKINSDF------------EDDYSFHKRITQALTILGTVHLNAYD 333
Query: 244 REDTI---LSMYLQQMLGYFQHFKIALHFQSLLFWLALMRDLMSKTKVAHSTGDGSTVNN 300
+ I ++YLQ ML H I L L FW +
Sbjct: 334 DKHKIPNNYNIYLQLMLQMVSHPSILLSSFVLPFWHTFI--------------------- 372
Query: 301 ADSGSGKVDSRKMRILSFLNDDISGAILDISFQRLVKREKAPGTQ--------GPLELWS 352
KV+S ++ L + I +L + F R+ EK+ Q G + WS
Sbjct: 373 ------KVESLELSYLEEVIKQIMETML-VKFVRIGDPEKSDSEQSKYSEIDFGTSKEWS 425
Query: 353 DDFEGKGDFSQYRSRLLELVKFVASNKPLVAGVKVSERVMAIINSLL----ISTMPAQDL 408
+ F G R+R L+++K + + +A + ++ +V ++++L ++++ +
Sbjct: 426 NFFGG------VRTRYLDIIKLITIQRREMAYIFIATKVADVLDALKANLNVASLSHEQT 479
Query: 409 AVMESMQSALENVVSAVFD---GSNQFGGANSEVQLSLSRIFEGLLRQLLSLKWTEPPLV 465
V+ES L++++ + D S+ F + Q ++ ++ + +L L + TEP +
Sbjct: 480 LVLESHSHILDSILLNIKDFTPESSLFFNKEQQQQPNIIQLTDRVLNLLFEINSTEPNIT 539
Query: 466 VALGHYLDALGPFLKYY---PDAVGGVISKLFELLTSLPFV-FKDPS---TNSARHARLQ 518
+D L ++ YY P+++ +++K+ L +PF +P+ NS H R +
Sbjct: 540 ---SFQIDCLQAYILYYQTNPESIKFLLNKIVPL---IPFPGLDNPNRSFQNSVLHTRRR 593
Query: 519 ICTSFIRIAKTSDKSILPHMKDIADTMAYLQREGRLLRGEHNLLGEAFLVMASA-AGIQQ 577
+S I I+ + P+ + ++ L ++ + E +L +V ++ QQ
Sbjct: 594 AISSLIGISTNISHLMKPYFDILYKSVVELFQKNVVTETEKVMLFHLLIVFSNNLPSYQQ 653
Query: 578 QQEVLAWLLEPLSQQWMQLEWQNNYLSEPLGLVRLCSDTSFMWSLFHTVTFFERALKRSG 637
+ +L P+ +QW+ LE + LS P ++ S S T R R
Sbjct: 654 TLDFYKGILTPIIEQWVSLE-MSTALSSPDAFIQYLG-LSIADSQNLDATLVSR---RKN 708
Query: 638 IRKANLNLQ----------SSSAE------NSAVMH----PMASHLSWMLPPLLKLLRAI 677
I+ LQ +SS E ++ + + P++S + +LP +L L R +
Sbjct: 709 IQYVASTLQIFWKKSQIPTNSSDELFAPFISNGISYNGKWPISSFVKQVLPGVLSLTRTL 768
Query: 678 HSIWSPSISQLLPGEIKAAMTMSDAEQFSLLGEGNPKFSRGAVAFADGSQLDTSKEGYGE 737
H +W P + + + D+ LLG + KE E
Sbjct: 769 HQLWMPEHRAKIHPSLSTIFNLDDSITAPLLG------------------FEYHKEQKSE 810
Query: 738 -PNESDIRNWLKGVRDSGYNVLGLSATIGDPFFK-SLDSGSVVVALMENIQSMEFRHIRQ 795
N + +RN L +RD+ Y ++G D F ++ ++ ++S+E RH++
Sbjct: 811 SSNVTFLRNILDCLRDACYEIVGYGFNHSDELFSLPDLPLVLLDSVFSYLESIENRHLKL 870
Query: 796 LVHSVLIHMVKFCPLDMWEFWLEKLLNPLFIHCQQVLSSSWSSLM---HEVAGSDLKVEV 852
LV +L +++K CP + E +L LF + + W + + + K E+
Sbjct: 871 LVKHILNYLIKNCPTKLEHTIFEPILPLLFSVLFNRIKAGWELIKLRSQKGEKENEKNEI 930
Query: 853 MEEKLLRDLTREICSLLSTMASSGLNNGIPPIEQSGHFYRVDVLSLKDLDAFASNSMVGF 912
+E+K+LRD++ E S + + N F +DV++ + S+ ++
Sbjct: 931 VEDKILRDVSMEFLMCCSNIITQSPNYI---------FSSIDVMT--PMVYGISSCLMA- 978
Query: 913 LLKHKDLALPALQISLEAFT--WTDGEAVTKVSSFCSAVVLLAIQSNNIELRQFVSKDLF 970
+ P L+ SL T D E V N+ + + + ++F
Sbjct: 979 ------MDTPILKKSLIVSTQLLVDHEKV-----------------NDPKFFKLIGSEMF 1015
Query: 971 SAIIRGLALESNAVISADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDALT 1030
I+ L + A S D+ + R I++ P+++LLSLP ITP L AF L
Sbjct: 1016 GCCIKILIVNKFAEFSNDIQSIIRLIYMKYYQICNYPQEILLSLPNITPPILQAFNKDLI 1075
Query: 1031 KTASPREQKQHMRSLL--VLGTG-NNLK 1055
T S + QK + LL V+G N LK
Sbjct: 1076 STRSEKSQKVLFKKLLQDVIGIPLNKLK 1103
>sp|Q9HAV4|XPO5_HUMAN Exportin-5 OS=Homo sapiens GN=XPO5 PE=1 SV=1
Length = 1204
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 243/1173 (20%), Positives = 474/1173 (40%), Gaps = 165/1173 (14%)
Query: 9 EEWALKSQTAALVAEIVRREGINLWQELFPSLVSLSSKGPIQAELVSMMLRWLPEDITVH 68
EE +K + +V E+++RE W ++ L +LS +G Q ELV +L L ED+ V
Sbjct: 108 EENHIKDALSRIVVEMIKREWPQHWPDMLIELDTLSKQGETQTELVMFILLRLAEDV-VT 166
Query: 69 NEDLEGDRRRLLLRGLTQSLPEILPLLYSLLERHFGAALS-EVGRQQLDVAKQHAATVTA 127
+ L RRR + + LTQ++ I L + L+ + + Q A+ + A
Sbjct: 167 FQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVA 226
Query: 128 TLNAINAYAEWAPLPDLAKYGI--IHGCGFLLSSPDFRLHACEFFKLVSPRKGPADASAS 185
LN + Y +W + + + LL+ + +L A E + RKG +
Sbjct: 227 ALNTLAGYIDWVSMSHITAENCKLLEILCLLLNEQELQLGAAECLLIAVSRKGKLEDRKP 286
Query: 186 EF----ESAMHDVFQILMKVSGEFLYRSGTSAGAIDESEFEFAEYICESMVSLGTSNLHC 241
+ AMH + G G + E + F + +C+ + +LG
Sbjct: 287 LMVLFGDVAMHYILSAAQTADG----------GGLVEKHYVFLKRLCQVLCALGNQLCAL 336
Query: 242 IAREDTI-----LSMYLQQMLGYFQHFKIALHFQSLLFWLALMRDLMSKTKVAHSTGDGS 296
+ + + YL+ L + H L + + W AL R
Sbjct: 337 LGADSDVETPSNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFRH--------------- 381
Query: 297 TVNNADSGSGKVDSRKMRILSFLNDDISGAILDISFQRLVKREKAPGTQGP-LELWSDDF 355
++ SR +L+ I L S LVK T P E DF
Sbjct: 382 ----------EILSRDPLLLA-----IIPKYLRASMTNLVKMGFPSKTDSPSCEYSRFDF 426
Query: 356 EGKGDFSQY----RSRLLELVKFVASNKPLVAGVKVSERVMAIINSLL------------ 399
+ DF+ + R++ E+++ P + E + +++ L
Sbjct: 427 DSDEDFNAFFNSSRAQQGEVMRLACRLDPKTSFQMAGEWLKYQLSTFLDAGSVNSCSAVG 486
Query: 400 -----ISTMPAQDLAVMESMQSALENVVSAVFDGSNQFGGANSEVQLSLSRIFEG--LLR 452
+ ++ + E+M LE+V++ +F N+ E+ ++ +G LL+
Sbjct: 487 TGEGSLCSVFSPSFVQWEAMTLFLESVITQMFRTLNR-----EEIPVN-----DGIELLQ 536
Query: 453 QLLSLKWTEPPLVVALGHYLDALGPFLKYYPDAVGGVISKLFELLTSLPFVF----KDPS 508
+L+ +P ++ + + AL PF+ Y P+ + V SKLF +S+ F K P
Sbjct: 537 MVLNFDTKDPLILSCVLTNVSALFPFVTYRPEFLPQVFSKLF---SSVTFETVEESKAPR 593
Query: 509 TNSARHARLQICTSFIRIAKTSDKSILPHMKDIADTMA-YLQREGRLLRGEHNLLGEAFL 567
T + R+ R C+S I++ + + +LP+ + + + L E L + E L EA +
Sbjct: 594 TRAVRNVRRHACSSIIKMCRDYPQLVLPNFDMLYNHVKQLLSNELLLTQMEKCALMEALV 653
Query: 568 VMASAAGIQQQQEV-LAWLLEPLSQQWMQLEWQ--------------------NNYLSEP 606
++++ ++Q+V L L+ P++ W+ + + L +P
Sbjct: 654 LISNQFKNYERQKVFLEELMAPVASIWLSQDMHRVLSDVDAFIAYVGTDQKSCDPGLEDP 713
Query: 607 LGLVRLCSDTSFMWSLFHTVTFFERALKRSGIRKANLN---LQSSSAENSAVMHPMASHL 663
GL R + ++ + +R + + +A + +S+ N +P +
Sbjct: 714 CGLNR----ARMSFCVYSILGVVKRTCWPTDLEEAKAGGFVVGYTSSGNPIFRNPCTEQI 769
Query: 664 SWMLPPLLKLLRAIHSIWSPSISQLLPGEIKAAMTMSDAEQFSLLGEGNPKFSRGAVAFA 723
+L LL L+R +++++P + + A+ M DAE+ ++LG P +
Sbjct: 770 LKLLDNLLALIRTHNTLYAPEMLAKMAEPFTKALDMLDAEKSAILGLPQP-----LLELN 824
Query: 724 DGSQLDTSKEGYGEPNESDIRNWLKGVRDSGYNVLGLSA-TIGDPFFKSLD-SGSVVVAL 781
D T E ++ + + ++ +++LG + ++ F+ D + ++ +
Sbjct: 825 DSPVFKTVLE--------RMQRFFSTLYENCFHILGKAGPSMQQDFYTVEDLATQLLSSA 876
Query: 782 MENIQSMEFRHIRQLVHSVLIHMVKFCPLDMWEFWLEKLLNPLFIHCQQVLSSSWSSLMH 841
N+ ++ +R ++ + +V FCP + +E + +L PLF + LS W +
Sbjct: 877 FVNLNNIPDYRLRPMLRVFVKPLVLFCPPEHYEALVSPILGPLFTYLHMRLSQKWQVINQ 936
Query: 842 E--VAGSDLKV-------EVMEEKLLRDLTREICSLLSTMASS---GLNNGIPPIEQSGH 889
+ G D E++EE+L+R LTRE+ L++ S ++ PP +
Sbjct: 937 RSLLCGEDEAADENPESQEMLEEQLVRMLTREVMDLITVCCVSKKGADHSSAPPADGDDE 996
Query: 890 FYRVDVLSLKDLDAFASNSMVG-FLLKHKDLALPALQISLEAFTWTDGEAVTKVSSFCSA 948
++ A A + +G L+KH+D+ L + + W D + + +S
Sbjct: 997 EMMATEVT---PSAMAELTDLGKCLMKHEDVCTALLITAFNSLAWKDTLSCQRTTSQLCW 1053
Query: 949 VVLLAIQSNNIELRQFVSKDLFSAIIRGLALE-SNAVISADLVGLCREIFIYMCDRDPAP 1007
+L + S + L V+ LF+++++GL + + A LV L +I+ + R
Sbjct: 1054 PLLKQVLSGTL-LADAVTW-LFTSVLKGLQMHGQHDGCMASLVHLAFQIYEALRPRYLEI 1111
Query: 1008 RQVLLSLPCITPQDLLAFE-----DALTKTASPREQKQHMRSLLVLGTGNNLKALAAQKS 1062
R V+ +P I L F+ +L K A R + Q R L+ G +K
Sbjct: 1112 RAVMEQIPEIQKDSLDQFDCKLLNPSLQKVADKRRKDQFKR--LIAGCIGKPLGEQFRKE 1169
Query: 1063 VNVITNVSTRPRSSDNAPESRTEEGESIGLAAI 1095
V+ I N+ + + + E+ + + GLA I
Sbjct: 1170 VH-IKNLPSLFKKTKPMLETEVLDNDGGGLATI 1201
>sp|Q924C1|XPO5_MOUSE Exportin-5 OS=Mus musculus GN=Xpo5 PE=2 SV=1
Length = 1204
Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 246/1166 (21%), Positives = 463/1166 (39%), Gaps = 151/1166 (12%)
Query: 9 EEWALKSQTAALVAEIVRREGINLWQELFPSLVSLSSKGPIQAELVSMMLRWLPEDITVH 68
EE +K + +V E+++RE W ++ L +L +G Q ELV +L L ED+ V
Sbjct: 108 EENHIKDVLSRIVVEMIKREWPQHWPDMLMELDTLFRQGETQRELVMFILLRLAEDV-VT 166
Query: 69 NEDLEGDRRRLLLRGLTQSLPEILPLLYSLLERHFGAALS-EVGRQQLDVAKQHAATVTA 127
+ L RRR + + LTQ++ IL L + L+ + + Q A+ + A
Sbjct: 167 FQTLPTQRRRDIQQTLTQNMERILNFLLNTLQENVNKYQQMKTDSSQEAEAQANCRVSVA 226
Query: 128 TLNAINAYAEWAPLPDLA--KYGIIHGCGFLLSSPDFRLHACEFFKLVSPRKGPADASAS 185
LN + Y +W L + ++ LL+ + +L A E + RKG +
Sbjct: 227 ALNTLAGYIDWVSLNHITAENCKLVETLCLLLNEQELQLGAAECLLIAVSRKGKLEDRKR 286
Query: 186 EF----ESAMHDVFQILMKVSGEFLYRSGTSAGAIDESEFEFAEYICESMVSLGTSNLHC 241
+ AMH + G G + E + F + +C+ + +LG
Sbjct: 287 LMILFGDVAMHYILSAAQTADG----------GGLVEKHYLFLKRLCQVLCALGNLLCAL 336
Query: 242 IAREDTI-----LSMYLQQMLGYFQHFKIALHFQSLLFWLALMRDLMSKTKVAHSTGDGS 296
+A + I MYL+ L + H L + + W AL R
Sbjct: 337 LALDANIQTPINFGMYLESFLAFTTHPSQFLRSSTHMTWGALFRH--------------- 381
Query: 297 TVNNADSGSGKVDSRKMRILSFLNDDISGAILDISFQRLVKREKAPGTQGP-LELWSDDF 355
+V SR +L+ + L S LVK T P E DF
Sbjct: 382 ----------EVLSRDPALLAVI-----PKYLRASMTNLVKMGFPSKTDSPSCEYSRFDF 426
Query: 356 EGKGDFSQY----RSRLLELVKFVASNKPLVAGVKVSERVMAIINSLLISTMPAQDLAVM 411
+ DF+ + R++ E+V+ V P + +E + + S I T P +
Sbjct: 427 DSDEDFNAFFNSSRAQHGEVVRCVCRLDPKTSFQMAAEWLKYQL-SASIDTGPVNSCSTA 485
Query: 412 ------------------ESMQSALENVVSAVFDGSNQFGGANSEVQLSLSRIFEGLLRQ 453
E+M LE+V++ +F ++ +L +S E LL+
Sbjct: 486 GTGEGGFCSIFSPSYVQWEAMTFFLESVINQMFRTLDK-------EELPVSDGIE-LLQL 537
Query: 454 LLSLKWTEPPLVVALGHYLDALGPFLKYYPDAVGGVISKLFELLTSLPF-VFKDPSTNSA 512
+L+ + +P ++ + + AL PF+ Y P + V SKLF +T K P T +
Sbjct: 538 VLNFEIKDPLVLSCVLTNVSALFPFVTYKPAFLPQVFSKLFSFVTFESVGESKAPRTRAV 597
Query: 513 RHARLQICTSFIRIAKTSDKSILPHMKDI-ADTMAYLQREGRLLRGEHNLLGEAFLVMAS 571
R+ R C+S ++ + +LP+ + + L E L + E L EA +++++
Sbjct: 598 RNVRRHACSSINKMCRDYPDLVLPNFDMLYSHVKQLLSNELLLTQMEKCALMEALVLVSN 657
Query: 572 A-AGIQQQQEVLAWLLEPLSQQWM--------------------QLEWQNNYLSEPLGLV 610
++Q+ L L+ P+ W+ L+ + + +P GL
Sbjct: 658 QFKDYERQKLFLEELMAPVVNIWLSEEMCRALSDIDSFIAYVGADLKSCDPAVEDPCGLN 717
Query: 611 RLCSDTSFMWSLFHTVTFFERALKRSGIRKANLN---LQSSSAENSAVMHPMASHLSWML 667
R + ++ + R S + +A + + + N +P + +L
Sbjct: 718 R----ARMSFCVYSILGVMRRTSWPSDLEEAKAGGFVVGYTPSGNPIFRNPCTEQILRLL 773
Query: 668 PPLLKLLRAIHSIWSPSISQLLPGEIKAAMTMSDAEQFSLLGEGNPKFSRGAVAFADGSQ 727
LL L+R +++++P + + A+ + ++E+ ++LG P + F D
Sbjct: 774 DNLLALVRTHNTLYTPEMLTKMAEPFTKALDIVESEKTAILGLPQP-----LLEFNDHPV 828
Query: 728 LDTSKEGYGEPNESDIRNWLKGVRDSGYNVLGLSA-TIGDPFFKSLDSGSVVV-ALMENI 785
T+ E ++ + + ++ Y++LG + ++ F+ D S ++ + N+
Sbjct: 829 YRTTLE--------RMQRFFGILYENCYHILGKAGPSMQQDFYTVEDLASQLLGSAFVNL 880
Query: 786 QSMEFRHIRQLVHSVLIHMVKFCPLDMWEFWLEKLLNPLFIHCQQVLSSSWSSLMHE--V 843
++ +R ++ + +V FCP + +E + +L PLF + LS W + +
Sbjct: 881 NNIPDFRLRSMLRVFVKPLVLFCPSEHYETLISPILGPLFTYLHMRLSQKWHVINQRSIL 940
Query: 844 AGSD-------LKVEVMEEKLLRDLTREICSL-LSTMASSGLNNGIPPIEQSGHFYRVDV 895
G D E++EE+L+R LTRE L ++ S + G +
Sbjct: 941 CGEDEIAEDNPESQEMLEEQLVRMLTREAMDLIMACCVSKKTADHTAAPTADGDDEEMMA 1000
Query: 896 LSLKDLDAFASNSMVGFLLKHKDLALPALQISLEAFTWTDGEAVTKVSSFCSAVVLLAIQ 955
+ + L+KH+D+ L + + TW D + + ++ +L +
Sbjct: 1001 TEVAPSSVVELTDLGKCLMKHEDVCTALLITAFNSLTWKDTLSCQRATTQLCWPLLKQVM 1060
Query: 956 SNNIELRQFVSKDLFSAIIRGLALE-SNAVISADLVGLCREIFIYMCDRDPAPRQVLLSL 1014
S + L V+ LF+++++GL + + A LV L +I+ + R R V+ +
Sbjct: 1061 SGTL-LADAVTW-LFTSVLKGLQMHGQHDGCMASLVHLAFQIYEALRPRYLEIRAVMEQI 1118
Query: 1015 PCITPQDLLAFEDAL----TKTASPREQKQHMRSLLVLGTGNNLKALAAQKSVNV-ITNV 1069
P I + L F+ L + A+ + +K H + L+ G K L Q V I N+
Sbjct: 1119 PEINKESLDQFDCKLLNPSLQKAADKRRKDHFKRLIAGCIG---KPLGEQFRKEVHIKNL 1175
Query: 1070 STRPRSSDNAPESRTEEGESIGLAAI 1095
+ E+ + E GLA I
Sbjct: 1176 PWLFKKPKPMLETEVLDSEEGGLATI 1201
>sp|O14116|YKX1_SCHPO Uncharacterized protein C328.01c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC328.01c PE=4 SV=2
Length = 1234
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 219/1146 (19%), Positives = 411/1146 (35%), Gaps = 191/1146 (16%)
Query: 13 LKSQTAALVAEIVRREGINLWQELFPS-LVSLSSKGPIQAELVSMMLRWLPEDITVHNED 71
++S+ A++ EI +R+ N W+E F S L SL S +L S++LR + ED+ +++
Sbjct: 116 VRSKLASVFIEIAKRDWYNTWREEFDSFLQSLWSLSLQHRQLSSLILRGIMEDLYQYDDP 175
Query: 72 LEGDRRRLLLRG----------LTQSLPEILPLLYSLLERHFGAALSEVGRQQLDVAKQH 121
+ R +L L + P LP ++ + G + + A +
Sbjct: 176 VASLRSHILFNALISILSSSSTLHKLYPSGLPYSVTIPSNNEGWLI------RWGNALES 229
Query: 122 AATVTATLNAINAYAEWAPLPDLAKYGII-HGCGFLLSSPDF-RLHACEFFKLVSPRKGP 179
L + W + + I+ H C L+ P F + HA + + R
Sbjct: 230 QDDALECLKCFKSCLSWVATDSIREANIVSHICQILVQGPIFLKTHAIDCIYICVTRTME 289
Query: 180 ADASASEF------ESAMHDVFQILMKVSGEFLYRSGTSAGAIDESEFEFAEYICESMVS 233
D E S+++ + Q+ S ++ +S E+ + + E++V+
Sbjct: 290 IDDPLWEIVEEMLSPSSLYTLHQVYTATSESINIKTLSSTTP----EYILLKKLSETIVA 345
Query: 234 LGTSNLHCIAREDTI----LSMYLQQMLGYFQHFKIALHFQSLLFWLALMRD-LMSKTKV 288
LG N R I L Y +L +H + + S FW+ +RD ++SK +
Sbjct: 346 LGQYNYLDSNRRKCIKLTSLDTYSLLVLEIMKHPSLLISAISQHFWVLALRDPIISKHE- 404
Query: 289 AHSTGDGSTVNNADSGSGKVDSRKMRILSFLNDDISGAILDISFQRLVKREKAPGTQGP- 347
K +I + +L I+ +RL++ E A P
Sbjct: 405 -----------------------KFQI-------VYPELLSIASERLLRFEDAVVELIPE 434
Query: 348 ---LELWSDDFEGKGDF----SQYRSRLLELVKFVASNKPLVAGVKVSERVMAIINSLLI 400
+ +D EG +R + ++V+ S P+ + + R + +
Sbjct: 435 SATAKYLQEDVEGVSAVHSFCGNFRRFMFDIVRLTVSITPIESLNWIQNRFQSTV----- 489
Query: 401 STMPAQDLAVMESMQSALE----------------NVVSAVFDGSNQFGGANSEVQLSLS 444
L ME +QS E + + A G ++ S+ +
Sbjct: 490 -------LGNMEDIQSQTEFFSKTSPLYLTMDVGFSTIEAFLHGVTRWNENTSDDPATYE 542
Query: 445 RIFEGLL---RQLLSLKWTEPPLVVALGHYLDALGPFL-KYYPDAVGGVISKLFELLT-- 498
I + L +QL+ + + +P L+ L L L + +G V+ K+ +T
Sbjct: 543 IILQNLFLWCKQLVEINFKDPMLITRLISVLVLFTSILARENTTLLGVVLEKIISAVTYD 602
Query: 499 --SLPFVFKDPSTNSARHARLQICTSFIRIAKTSDKSILPHMKDIADTMAYLQREGRLLR 556
S + F D R + C +R+ + ++ + + L L
Sbjct: 603 NTSASYGFSD--VQKINEMRSRCCFELVRLGELMPNPLMNIFDQLQSIIDQLDNATTLTG 660
Query: 557 GEHNLLGEAFLVMA--SAAGIQQQQEVLAWLLEPLSQQWMQLEWQNNYLSEPL---GLVR 611
E +L V+ S I+ + E L+ P+ + W+ ++ N E L G +
Sbjct: 661 SEIVMLKTFLFVITQFSDVNIEVKNEYFEKLVGPVVKTWLDVQPPVNSPMEFLNHIGFPQ 720
Query: 612 LCSDTSFMWSLFHTVTFFE----RALKRSGIRKAN--------LNLQSSSAENSAVMHPM 659
+ S + T FE A +S + L + ++ +HP
Sbjct: 721 MAEYLSAKYPYNADYTQFELDADAASYQSNLETGRKWLWPIKCLGRFCEATCSNKHIHPS 780
Query: 660 ASH---------LSWMLPPLLKLLRAIHSIWSPSISQLLPGEIKAAMTMSDAEQFSLLGE 710
L ++P LLKL+ +H + PS L + + S E+F L
Sbjct: 781 EFEGQKNLWQVILPNVVPNLLKLVEQLHCCYEPSFISGLGMHNSSILQKSIVERFWL--H 838
Query: 711 GNPKFSRGAVAFADGSQLDTSKEGYGEPNESDIRNWLKGVRDSGYNVLGLSATIGDPFFK 770
G + S+ + ++D S ++L+ +R+ Y + +G FF
Sbjct: 839 GVSQISKNQF-LEESYKMDVSANKLIH----SFGHFLRRLREYCYYAIASFMRLGQAFFC 893
Query: 771 SLD-SGSVVVALMENIQSMEFRHIRQLVHSVLIHMVKFCPLDMWEFWLEKLLNPLFIHCQ 829
S + A + + +V+ V+ CP ++ + L LL L
Sbjct: 894 VPGLSKQFLTAFFSHAAGLSLHQWTSMVNVVIKPYCVNCPAELRDECLLPLLPALLSELD 953
Query: 830 QVLSSSWSS------LMHEVA-----GSDLKVEVMEEKLLRDLTREICSLLSTMASSGLN 878
L S W L+ E A DL E++EE LLR LT L++
Sbjct: 954 HKLVSEWRRINDRGLLVEEDAEETGEDDDLSEEMIEESLLRHLTYATAKLITETFLQ--- 1010
Query: 879 NGIPPIEQSGHFYRVDVLSLKDLDAFASNSMVG------------FLLKHKDLALPALQI 926
I P + + S+S++G ++L + + P L
Sbjct: 1011 --ITPTQSRSN---------------VSSSLIGKETVEGPVKLSEYVLDNAIICEPLLCT 1053
Query: 927 SLEAFTWTDGEAV-TKVSSFCSAVVLLAIQSNNIELRQFVSKDLFSAIIRGLALESNAVI 985
D V V++F + LL + + +R+F+ + +F ++I + +
Sbjct: 1054 LCHLLVIHDSRTVGLVVNAFLAITPLLVSEQAHSLVREFICQQVFQSVILAIHDPYFESM 1113
Query: 986 SADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLL--AFEDALTKTASPREQKQHMR 1043
+D + L I Y + Q+L S+P + Q+ L AF + + ++ + QK +
Sbjct: 1114 QSDFIRLACIILSYSQGITDSAFQLLASIPALANQENLVPAFFNKFREASTLKIQKALLT 1173
Query: 1044 SLLVLG 1049
LL G
Sbjct: 1174 RLLNSG 1179
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 98 LLERHFGAALSEVGRQQLDVAKQHAATVTATLNAINAYAEWAPLPDLAKYGIIHGC 153
LL R GA++ + R DVA+ A + N + PDL YGI+ GC
Sbjct: 41 LLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGC 96
>sp|Q6C715|XPOT_YARLI Exportin-T OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=LOS1
PE=3 SV=1
Length = 1025
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 16/121 (13%)
Query: 125 VTATLNAINAYAEWAPLPDLAKYGIIHGCGFLLSSPDFRLHACEFFKLVSPRKGPADASA 184
V L I + WA L +A+ + LLSSP R+HAC+ + +K +A
Sbjct: 227 VNNALRVIGGWVSWAELTLIAEPEALEAIFNLLSSPKSRIHACDCLSEIVAKKMYPNAK- 285
Query: 185 SEFESAMHDVFQILMKVSGEFLYRSGTSAGAIDESEFEFAEYICESMVSLGTSNLHCIAR 244
FQ++ ++ + + + + I EF E + + S+G+ +H +
Sbjct: 286 ----------FQLIQSLNLTSIIHTLSQSADI-----EFDERVAKLANSIGSELIHIVET 330
Query: 245 E 245
E
Sbjct: 331 E 331
>sp|P30822|XPO1_YEAST Exportin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=CRM1 PE=1 SV=1
Length = 1084
Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 86/207 (41%), Gaps = 26/207 (12%)
Query: 21 VAEIVRREGINLWQELFPSLVSLSSKGPIQAELVSMMLRWLPEDITVHNEDLEGDRRRLL 80
+ +I+++E W E P L+ SS E ++L+ L E++ + + + L
Sbjct: 122 LVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAKALH 181
Query: 81 LRG-LTQSLPEILPLLYSLLERHFGAALSEVGRQQLDVAKQHAATVTATLNAINAYAEWA 139
L+ +++ +I L + +LE+ ++L + ATL ++ Y W
Sbjct: 182 LKNSMSKEFEQIFKLCFQVLEQGSSSSL-----------------IVATLESLLRYLHWI 224
Query: 140 PLPDLAKYGIIHGCGF-LLSSPDFRLHACEFFKLVSPRKGPADASASE------FESAMH 192
P + + I+ ++SPD R + VS K P D + F++ +
Sbjct: 225 PYRYIYETNILELLSTKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQ 284
Query: 193 DVFQILMKVSGEFLYRSGTSAGAIDES 219
+ +M V+ + L + +A D+S
Sbjct: 285 QIATSVMPVTAD-LKATYANANGNDQS 310
>sp|Q0VNJ1|MUTS_ALCBS DNA mismatch repair protein MutS OS=Alcanivorax borkumensis (strain
SK2 / ATCC 700651 / DSM 11573) GN=mutS PE=3 SV=1
Length = 859
Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 53/247 (21%)
Query: 364 YRSRLLELVKFVAS----NKPLVAGVKVSERVMAIINSLLISTMPAQDLAVMESMQSALE 419
Y +RL++L + VA P +A V +V+ I+ +S D A++E + +
Sbjct: 77 YLARLVKLGESVAIAEQIGDPALAKGPVERKVVRIVTPGTVS-----DEALLEERR---D 128
Query: 420 NVVSAVFDGSNQFGGANSEVQLSLSRIF----EGLLR-QLLSLKWTEPPLVVALGHYL-- 472
N++ AVFD +NQ+G A+ + L+ R EG + Q L +W+ L+++ H L
Sbjct: 129 NLLCAVFDHNNQYGCAS--LDLAAGRFLVTQVEGAEQLQALLERWSPAELLISEEHGLPG 186
Query: 473 ---DALG----PFLKYYPDAVGGVISKLFELLTSLPFVFKDPSTNSARHARLQICTSFIR 525
D G P ++ DA + + F++ F P SA + +
Sbjct: 187 RWSDRPGTRKRPSWEFDEDAARRQLCQQFQVQDLAGFGEPSPVAVSA-------AGALLG 239
Query: 526 IAKTSDKSILPHMKDIA-----DTMAYLQREGRLLRGEHNLLGEAFLVMASAAGIQQQQE 580
AK + + LPH+ + D +A R L L G Q+Q
Sbjct: 240 YAKETQRGELPHITGLTVESFDDAVAMDAATRRNLELTETLDG-------------QEQH 286
Query: 581 VLAWLLE 587
LAW+L+
Sbjct: 287 TLAWVLD 293
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 382,978,547
Number of Sequences: 539616
Number of extensions: 15452878
Number of successful extensions: 39612
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 39573
Number of HSP's gapped (non-prelim): 24
length of query: 1096
length of database: 191,569,459
effective HSP length: 128
effective length of query: 968
effective length of database: 122,498,611
effective search space: 118578655448
effective search space used: 118578655448
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)