BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001345
(1096 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8WVM7|STAG1_HUMAN Cohesin subunit SA-1 OS=Homo sapiens GN=STAG1 PE=1 SV=3
Length = 1258
Score = 286 bits (732), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 254/1001 (25%), Positives = 461/1001 (46%), Gaps = 54/1001 (5%)
Query: 23 RSRASEGTAASAQSIELSLIEVIKGNGKLIPQVVKLWVERYEKDAKPAIAELLTMLFEAC 82
R RA+ + + ++L EV+K + VV W+E Y++D A+ +L+ +
Sbjct: 69 RGRANGHPQQNGEGEPVTLFEVVKLGKSAMQSVVDDWIESYKQDRDIALLDLINFFIQCS 128
Query: 83 GAKYYLQGESLDEIDVDDVVVALVNLARRGEVEDYQSSKRKELKNFKDNLVSFWDNLVVE 142
G + ++ E + +++ + + + + K F+ N F L+ +
Sbjct: 129 GCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFRSNFCEFIGVLIRQ 188
Query: 143 CQNGPLFDKVLFDKCMDYIIALSCTPPRVYRQVASLMGLQLVTSFISVAKMLGAQRETTQ 202
CQ ++D+ + D + + LS + R +R ++L ++L+T+ ++VA L ++ TQ
Sbjct: 189 CQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIHQDNTQ 248
Query: 203 RQLNAEKKKRV---EGPRVESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIR 259
RQ AE+ K + R+E L ++ +N ++E+MM IF G+FVHRYRD IR
Sbjct: 249 RQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHRYRDAIAEIR 308
Query: 260 MSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLG 319
CI+ +GVW+ Y FL D YLKY+GWTL+D+ VR + ALQ+LY + P L
Sbjct: 309 AICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTNRELFPKLE 368
Query: 320 LFTERFSNRMIELADDIDVSVAVCAIGLVKQLLR--HQLLPDDDLGPLYDLLIDDPPEIR 377
LFT RF +R++ + D + VAV AI LV +L + L ++D +Y L+ +
Sbjct: 369 LFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCENVYHLVYSAHRPVA 428
Query: 378 RAIGELVYDHLIAQKFNSSQSGL-KGKDNDSSEVHLGRMLQILREFSADPILSIYVIDDV 436
A GE ++ L ++ ++ L K + +S +L RML + S + Y++D +
Sbjct: 429 VAAGEFLHKKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEHAAYLVDSL 488
Query: 437 WEYMKA-MKDWKCIISMLLDENPLID---LNDDDATNLIRLLSASVKKAVGERIVPASDN 492
WE + +KDW+C+ +LL+E P+ ++D + LI L+ ++++A
Sbjct: 489 WESSQELLKDWECMTELLLEE-PVQGEEAMSDRQESALIELMVCTIRQAAEAHPPVGRGT 547
Query: 493 RKPYYNKAQKEVFENNKREITRAMMKNYPRLLRKFMADKAKVPSLIDIVMHMKLELYSLK 552
K +++ +++ ++T + P LL K+ AD KV +L+ I + LE+YS
Sbjct: 548 GKRVLTAKERKTQIDDRNKLTEHFIITLPMLLSKYSADAEKVANLLQIPQYFDLEIYSTG 607
Query: 553 RDEKSFETILQLVNDAFFKHGEKEALRSCVKAIK-FCSAESQGELQ-DSARKNLKDVEDK 610
R EK + +L+ + KH E + L +C K CS E + + D AR L D+
Sbjct: 608 RMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCSEEYTIQNRVDIARSQLI---DE 664
Query: 611 LIAKLKSAIKAVL------DGDDEYSLLVNLKRLYELQLSKAVPIESLYEDLVMILHT-- 662
+ + +++ +L D DD Y++L LKRL + + L+ + +L T
Sbjct: 665 FVDRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFGNCYRLLKTGI 724
Query: 663 -FRNLDNEVVSFLLLNLYLYLAWSLHSIINAETVSEASLASLLLKRNTLFEELEYFLNSP 721
+ ++V L + + W L I + E LL+ R T+ L
Sbjct: 725 EHGAMPEQIVVQALQCSHYSILWQLVKITDGSPSKE----DLLVLRKTVKSFLAVCQQCL 780
Query: 722 SEVEEGSRVGNQLACRVCTILAEMWCLFRMTNFSSTKLSRLGYCPDIPVLQKFWKLCEQQ 781
S V + V Q +C +L M ++ L L + PD + +
Sbjct: 781 SNV--NTPVKEQAFMLLCDLL--MIFSHQLMTGGREGLQPLVFNPDTGLQSELLSFVMDH 836
Query: 782 LNISDETEDEDVNKEYIEETN-------RDAVMIAAAKLIAIDSVPKEYLGPEIISHFVM 834
+ I + E++ + + +E N R ++ A +KLI D V + +I H++
Sbjct: 837 VFIDQDEENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDM-HAAADIFKHYMK 895
Query: 835 HGTNVAEIVKHLITVLKKKDE-DVSTIFLEALKRAYQRHAVEISRSDDKSLTEKSFVECK 893
+ + +I+K ++ ++ D+ + + +L++ + E + D++ S + K
Sbjct: 896 YYNDYGDIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGI--K 953
Query: 894 ELSSRLSGTYVGAARNKHRSDILKTVKEGIDYAFL--------DAPKQLSFLECAVLHFV 945
EL+ R + T+ G + K R + K+GI++AF P L+FLE + F
Sbjct: 954 ELARRFALTF-GLDQIKTREAVATLHKDGIEFAFKYQNQKGQEYPPPNLAFLE-VLSEFS 1011
Query: 946 SKLPTPDILDILKDVQIRTDNVNMDEDPSGWRPFKSFVETL 986
SKL D + ++ M+ W P S+ +L
Sbjct: 1012 SKLLRQDKKTVHSYLEKFLTEQMMERREDVWLPLISYRNSL 1052
>sp|Q9D3E6|STAG1_MOUSE Cohesin subunit SA-1 OS=Mus musculus GN=Stag1 PE=1 SV=3
Length = 1258
Score = 285 bits (729), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 254/1001 (25%), Positives = 460/1001 (45%), Gaps = 54/1001 (5%)
Query: 23 RSRASEGTAASAQSIELSLIEVIKGNGKLIPQVVKLWVERYEKDAKPAIAELLTMLFEAC 82
R RA+ + ++L EV+K + VV W+E Y++D A+ +L+ +
Sbjct: 69 RGRANGHPQQNGDGDPVTLFEVVKLGKSAMQSVVDDWIELYKQDRDIALLDLINFFIQCS 128
Query: 83 GAKYYLQGESLDEIDVDDVVVALVNLARRGEVEDYQSSKRKELKNFKDNLVSFWDNLVVE 142
G + ++ E + +++ + + + + K F+ N F L+ +
Sbjct: 129 GCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFRSNFCEFIGVLIRQ 188
Query: 143 CQNGPLFDKVLFDKCMDYIIALSCTPPRVYRQVASLMGLQLVTSFISVAKMLGAQRETTQ 202
CQ ++D+ + D + + LS + R +R ++L ++L+T+ ++VA L ++ TQ
Sbjct: 189 CQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIHQDNTQ 248
Query: 203 RQLNAEKKKRV---EGPRVESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIR 259
RQ AE+ K + R+E L ++ +N ++E+MM IF G+FVHRYRD IR
Sbjct: 249 RQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHRYRDAIAEIR 308
Query: 260 MSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLG 319
CI+ +GVW+ Y FL D YLKY+GWTL+D+ VR + ALQ+LY + P L
Sbjct: 309 AICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTNRELFPKLE 368
Query: 320 LFTERFSNRMIELADDIDVSVAVCAIGLVKQLLR--HQLLPDDDLGPLYDLLIDDPPEIR 377
LFT RF +R++ + D + VAV AI LV +L + L ++D +Y L+ +
Sbjct: 369 LFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCENVYHLVYSAHRPVA 428
Query: 378 RAIGELVYDHLIAQKFNSSQSGL-KGKDNDSSEVHLGRMLQILREFSADPILSIYVIDDV 436
A GE ++ L ++ ++ L K + +S +L RML + S + Y++D +
Sbjct: 429 VAAGEFLHKKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEHAAYLVDSL 488
Query: 437 WEYMKA-MKDWKCIISMLLDENPLID---LNDDDATNLIRLLSASVKKAVGERIVPASDN 492
WE + +KDW+C+ +LL+E P+ ++D + LI L+ ++++A
Sbjct: 489 WESSQELLKDWECMTELLLEE-PVQGEEAMSDRQESALIELMVCTIRQAAEAHPPVGRGT 547
Query: 493 RKPYYNKAQKEVFENNKREITRAMMKNYPRLLRKFMADKAKVPSLIDIVMHMKLELYSLK 552
K +++ +++ ++T + P LL K+ AD KV +L+ I + LE+YS
Sbjct: 548 GKRVLTAKERKTQIDDRNKLTEHFIITLPMLLSKYSADAEKVANLLQIPQYFDLEIYSTG 607
Query: 553 RDEKSFETILQLVNDAFFKHGEKEALRSCVKAIK-FCSAESQGELQ-DSARKNLKDVEDK 610
R EK + +L+ + KH E + L +C K CS E + + D AR L D+
Sbjct: 608 RMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCSEEYTIQNRVDIARSQLI---DE 664
Query: 611 LIAKLKSAIKAVL------DGDDEYSLLVNLKRLYELQLSKAVPIESLYEDLVMILHT-- 662
+ + +++ +L D DD Y++L LKRL + + L+ + +L T
Sbjct: 665 FVDRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFGNCYRLLKTGI 724
Query: 663 -FRNLDNEVVSFLLLNLYLYLAWSLHSIINAETVSEASLASLLLKRNTLFEELEYFLNSP 721
+ ++V L + + W L I + E LL+ R T+ L
Sbjct: 725 EHGAMPEQIVVQALQCSHYSILWQLVKITDGSPSKE----DLLVLRKTVKSFLAVCQQCL 780
Query: 722 SEVEEGSRVGNQLACRVCTILAEMWCLFRMTNFSSTKLSRLGYCPDIPVLQKFWKLCEQQ 781
S V + V Q +C +L M ++ L L + PD + +
Sbjct: 781 SNV--NTPVKEQAFMLLCDLL--MIFSHQLMTGGREGLQPLVFNPDTGLQSELLSFVMDH 836
Query: 782 LNISDETEDEDVNKEYIEETN-------RDAVMIAAAKLIAIDSVPKEYLGPEIISHFVM 834
+ I + E++ + + +E N R ++ A +KLI D V + +I H++
Sbjct: 837 VFIDQDEENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDM-HAAADIFKHYMK 895
Query: 835 HGTNVAEIVKHLITVLKKKDE-DVSTIFLEALKRAYQRHAVEISRSDDKSLTEKSFVECK 893
+ + +I+K ++ ++ D+ + + +L++ + E + D++ S + K
Sbjct: 896 YYNDYGDIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGI--K 953
Query: 894 ELSSRLSGTYVGAARNKHRSDILKTVKEGIDYAFL--------DAPKQLSFLECAVLHFV 945
EL+ R + T+ G + K R + K+GI++AF P L+FLE + F
Sbjct: 954 ELARRFALTF-GLDQIKTREAVATLHKDGIEFAFKYQNQKGQEYPPPNLAFLE-VLSEFS 1011
Query: 946 SKLPTPDILDILKDVQIRTDNVNMDEDPSGWRPFKSFVETL 986
SKL D + ++ M+ W P S+ +L
Sbjct: 1012 SKLLRQDKKTVHSYLEKFLTEQMMERREDVWLPLISYRNSL 1052
>sp|Q9UJ98|STAG3_HUMAN Cohesin subunit SA-3 OS=Homo sapiens GN=STAG3 PE=1 SV=2
Length = 1225
Score = 270 bits (690), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 244/940 (25%), Positives = 439/940 (46%), Gaps = 71/940 (7%)
Query: 41 LIEVIKGNGKLIPQVVKLWVERYEKDAKPAIAELLTMLFEACGAKYYLQGESLDEIDVDD 100
L +K + +V W++ Y++D EL+ ++CG K + E ++ +
Sbjct: 100 LFNAVKAAKSDMQSLVDEWLDSYKQDQDAGFLELVNFFIQSCGCKGIVTPEMFKKMSNSE 159
Query: 101 VVVALVNLARRGEVEDYQSSKRKELKNFKDNLVSFWDNLVVECQNGPLFDKVLFDKCMDY 160
++ L + + K F+ + F LV +CQ L+D D +
Sbjct: 160 IIQHLTEQFNEDSGDYPLIAPGPSWKKFQGSFCEFVRTLVCQCQYSLLYDGFPMDDLISL 219
Query: 161 IIALSCTPPRVYRQVASLMGLQLVTSFISVAKMLGAQRETTQRQLNAEKKKRVEGP---- 216
+ LS + R +R ++L ++L+TS + VA L ++ QRQ AE+ K GP
Sbjct: 220 LTGLSDSQVRAFRHTSTLAAMKLMTSLVKVALQLSVHQDNNQRQYEAERNK---GPGQRA 276
Query: 217 --RVESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIRMSCIQSLGVWILSYP 274
R+ESL ++ ++ ++E MM +F G+FVHRYRD+ P IR CI+ +G W+ SY
Sbjct: 277 PERLESLLEKRKELQEHQEEIEGMMNALFRGVFVHRYRDVLPEIRAICIEEIGCWMQSYS 336
Query: 275 SFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMIELAD 334
+ FL D YLKY+GWTL+DK VR V AL+ LY D L LFT RF +RM+ +
Sbjct: 337 TSFLTDSYLKYIGWTLHDKHREVRLKCVKALKGLYGNRDLTTRLELFTSRFKDRMVSMVM 396
Query: 335 DIDVSVAVCAIGLVKQLLRHQ--LLPDDDLGPLYDLLIDDPPEIRRAIGELVYDHLIAQK 392
D + VAV A+ L+ +L++ +L D D +Y ++ + A GE +Y L +
Sbjct: 397 DREYDVAVEAVRLLILILKNMEGVLTDADCESVYPVVYASHRGLASAAGEFLYWKLFYPE 456
Query: 393 FNSSQSGLKGKDNDSSEVHLGRMLQILREFSADPIL---SIYVIDDVWEYMKA-MKDWKC 448
G G++ S Q+L F + L + Y++D +W+ A +KDW+
Sbjct: 457 CEIRMMG--GREQRQSPGAQRTFFQLLLSFFVESELHDHAAYLVDSLWDCAGARLKDWEG 514
Query: 449 IISMLLDENPLIDLNDDDATNLIRLLSASVKKAV-GERIVPASDNRKPYYNKAQKEVFEN 507
+ S+LL+++ +L D + LI +L +S ++A G V RK +K +K +
Sbjct: 515 LTSLLLEKDQ--NLGDVQESTLIEILVSSARQASEGHPPVGRVTGRKGLTSKERK-TQAD 571
Query: 508 NKREITRAMMKNYPRLLRKFMADKAKVPSLIDIVMHMKLELYSLKRDEKSFETILQLVND 567
++ ++T ++ P+LL KF AD KV L+ ++ L +Y R EK E LQ + +
Sbjct: 572 DRVKLTEHLIPLLPQLLAKFSADAEKVTPLLQLLSCFDLHIYCTGRLEKHLELFLQQLQE 631
Query: 568 AFFKHGEKEALRSCVKAIK-FCSAE-SQGELQDSARKNLKD-VEDKLIAKLKSAIK-AVL 623
KH E L + A+ C+ E + D AR L D + D+ +L+ ++ + L
Sbjct: 632 VVVKHAEPAVLEAGAHALYLLCNPEFTFFSRADFARSQLVDLLTDRFQQELEELLQSSFL 691
Query: 624 DGDDEYSLLVNLKRLYELQLSKAVPIESLYEDLVMILHTFRN---LDNEVVSFLLLNLYL 680
D D+ Y+L LKRL + + LYE +L + + ++V+ L +Y
Sbjct: 692 DEDEVYNLAATLKRLSAFYNTHDLTRWELYEPCCQLLQKAVDTGEVPHQVILPALTLVYF 751
Query: 681 YLAWSLHSIINAETVSEASLASLLLKRNTLFEELEYFLNSPSEVEEGSRVGNQLACRVCT 740
+ W+L I ++ S+ L+SL R+ + E + S+V+ ++ +
Sbjct: 752 SILWTLTHISKSD-ASQKQLSSL---RDRMVAFCELCQSCLSDVD------TEIQEQAFV 801
Query: 741 ILAEMWCLF--RMTNFSSTKLSRLGYCPDIPVLQKFWKLCEQQLNI------SDETEDED 792
+L+++ +F +M L L + P+ + + + I S +++++
Sbjct: 802 LLSDLLLIFSPQMIVGGRDFLRPLVFFPEATLQSELASFLMDHVFIQPGDLGSGDSQEDH 861
Query: 793 VNKEYIEETNRDAVMIAAAKLIAIDSVPKEYLGPEIISHFVMHGTNVAEIVKHLITVLKK 852
+ E + + R ++A + + V + ++ H+ + +I+K +T ++
Sbjct: 862 LQIERLHQRRR---LLAGFCKLLLYGVLEMDAASDVFKHYNKFYNDYGDIIKETLTRARQ 918
Query: 853 KDED-VSTIFLEALKRAY----QRHAVEISRSDDKSLTE-KSFVECKELSSRLSGTYVGA 906
D S I L +LK+ Y Q H + L E +F+E ++L+ R + ++ G
Sbjct: 919 IDRSHCSRILLLSLKQLYTELLQEHG-------PQGLNELPAFIEMRDLARRFALSF-GP 970
Query: 907 ARNKHRSDILKTVKEGIDYAF--------LDAPKQLSFLE 938
+ ++R ++ KEGI ++ + P L+FLE
Sbjct: 971 QQLQNRDLVVMLHKEGIQFSLSELPPAGSSNQPPNLAFLE 1010
>sp|Q9DGN1|STAG1_XENLA Cohesin subunit SA-1 OS=Xenopus laevis GN=stag1 PE=1 SV=1
Length = 1265
Score = 270 bits (689), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 265/1056 (25%), Positives = 484/1056 (45%), Gaps = 66/1056 (6%)
Query: 10 SPDDFEEIRPKTK-RSRASEGTAASAQSIELSLIEVIKGNGKLIPQVVKLWVERYEKDAK 68
+P D P ++ R RA+ + + ++L EV+K + VV W+E Y++D
Sbjct: 62 TPGDRSRAEPGSRGRGRANGHPQQNGEGDPVTLFEVVKMGKSAMQAVVDDWIESYKQDRD 121
Query: 69 PAIAELLTMLFEACGAKYYLQGESLDEIDVDDVVVALVNLARRGEVEDYQSSKRKELKNF 128
A+ +L+ + G K ++ E + +++ + + + K F
Sbjct: 122 IALLDLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPHWKKF 181
Query: 129 KDNLVSFWDNLVVECQNGPLFDKVLFDKCMDYIIALSCTPPRVYRQVASLMGLQLVTSFI 188
+ N F L+ +CQ ++D+ + D + + LS + R +R ++L ++L+T+ +
Sbjct: 182 RCNFCEFISVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALV 241
Query: 189 SVAKMLGAQRETTQRQLNAEKKKRVE---GPRVESLNKRLSMTHKNITDLEDMMRKIFTG 245
+VA L ++ TQRQ E+ K + R+E L ++ +N ++E+MM IF G
Sbjct: 242 NVALNLSIHQDNTQRQYETERNKIINKRANERLELLLQKRKELQENQDEIENMMNSIFKG 301
Query: 246 LFVHRYRDIDPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLAL 305
+FVHRYRD IR CI+ +GVW+ Y FL D YLKY+GWTL+D+ VR + AL
Sbjct: 302 IFVHRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKAL 361
Query: 306 QNLYEVDDNVPTLGLFTERFSNRMIELADDIDVSVAVCAIGLVKQLLR--HQLLPDDDLG 363
Q+LY + P L LFT RF +R++ + D + VAV AI LV +L + L ++D
Sbjct: 362 QSLYTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCE 421
Query: 364 PLYDLLIDDPPEIRRAIGELVYDHLIAQKFNSSQSGLKGKDNDSSEVHLGRMLQILREFS 423
+Y L+ + A GE ++ L ++ ++ L + SS G ++++L F
Sbjct: 422 NVYHLVYSAHRPVAVAAGEFLHKKLFSRHDPQAEEALAKRRGRSSPN--GNLVKMLVLFF 479
Query: 424 ADPIL---SIYVIDDVWE-YMKAMKDWKCIISMLLDENPLID---LNDDDATNLIRLLSA 476
+ L + Y++D +WE + +KDW+C+ +L++E P+ +++ + L+ L+
Sbjct: 480 LESELHEHAAYLVDSLWESSQELLKDWECMTELLVEE-PMQGEEVMSERQESALVELMVC 538
Query: 477 SVKKAVGERIVPASDNRKPYYNKAQKEVFENNKREITRAMMKNYPRLLRKFMADKAKVPS 536
++++A K +++ ++K ++T + P LL K+ AD KV +
Sbjct: 539 TIRQAAEAHPPVGRGTGKRVLTAKERKTQLDDKTKLTEHFIVALPVLLSKYSADAEKVAN 598
Query: 537 LIDIVMHMKLELYSLKRDEKSFETILQLVNDAFFKHGEKEALRSCVKAIK-FCSAESQGE 595
L+ I + LELYS R EK +++L+ + KH E + L +C K CS E
Sbjct: 599 LLQIPQYFDLELYSTGRMEKHLDSLLKQIRFVVEKHIESDVLEACSKTYSILCSEEYT-- 656
Query: 596 LQDSARKNLKDVEDKLIAKLKSAIKAVLDGDDE------YSLLVNLKRLYELQ----LSK 645
+Q+ + D+L + A++ +L +E Y+++ +LKRL L+K
Sbjct: 657 IQNRVEIAHSQLIDELADRFSHAVEELLQEAEEADEDEIYNVMASLKRLTCFHNAHDLTK 716
Query: 646 AVPIESLYEDLVMILHTFRNLDNEVVSFLLLNLYLYLAWSLHSIINAETVSEASLASLLL 705
+ Y L + ++ VV L + Y L W L I E LA L
Sbjct: 717 WDFFGNCYRLLRAGIEHEGMMEQIVVQALQCSHYSIL-WQLVKITEGNPSKEEMLA-LRK 774
Query: 706 KRNTLFEELEYFLNSPSEVEEGSRVGNQLACRVCTILAEMWCLFRMTNFSSTKLSRLGYC 765
+ + L+S + + V Q +C +L M ++T L L +
Sbjct: 775 TVKSFLAVCQQCLSSMTTL-----VKEQAFMLLCDLL--MIFSHQLTTGGRENLLLLVFN 827
Query: 766 PDIPVLQKFWKLCEQQLNISDETEDEDVNKEYIEETN-------RDAVMIAAAKLIAIDS 818
PD+ + + + I + E++ + + +E N R ++ + KLI D
Sbjct: 828 PDVGLQSELLSFVMDHVFIDQDDENQSMEGDEEDEANKIEALHKRRNLLASFCKLIIYDI 887
Query: 819 VPKEYLGPEIISHFVMHGTNVAEIVKHLITVLKKKDE-DVSTIFLEALKRAYQRHAVEIS 877
V +I H++ + + +I+K ++ ++ D+ + + +L++ + E
Sbjct: 888 VDMN-AAADIFKHYMKYYNDYGDIIKETLSKTRQMDKIQCAKTLILSLQQLFNELVQEQG 946
Query: 878 RSDDKSLTEKSFVECKELSSRLSGTYVGAARNKHRSDILKTVKEGIDYAF-LDAPK---- 932
+ D++ S + KEL+ R + T+ G + K R + K+GI++AF PK
Sbjct: 947 PNLDRTSAHVSGI--KELARRFALTF-GLDQIKTREAVATLHKDGIEFAFKYQNPKGPEY 1003
Query: 933 ---QLSFLECAVLHFVSKLPTPDILDILKDVQIRTDNVNMDEDPSGWRPFKSFVETL--- 986
L+FLE + F SKL D + ++ ++ M+ W P S+ +L
Sbjct: 1004 PPLNLAFLE-VLSEFSSKLLRQDKKTVHSYLEKFLTDLMMERREDVWLPLISYRNSLVTG 1062
Query: 987 --REKYTKNEGIQEEKEAVTVRRRGRP--RKKRNIE 1018
++ + N G K + ++GRP KKR IE
Sbjct: 1063 GDEDRLSVNSGGSNSKGSSVRSKKGRPPLHKKRVIE 1098
>sp|Q8N3U4|STAG2_HUMAN Cohesin subunit SA-2 OS=Homo sapiens GN=STAG2 PE=1 SV=3
Length = 1231
Score = 264 bits (674), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 239/955 (25%), Positives = 437/955 (45%), Gaps = 63/955 (6%)
Query: 39 LSLIEVIKGNGKLIPQVVKLWVERYEKDAKPAIAELLTMLFEACGAKYYLQGESLDEIDV 98
+ L EV+K + VV W+E Y+ D A+ +L+ + G K + E +
Sbjct: 82 MMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQN 141
Query: 99 DDVVVALVNLARRGEVEDYQSSKRKELKNFKDNLVSFWDNLVVECQNGPLFDKVLFDKCM 158
+++ + + + + K FK + F LV +CQ ++D+ + D +
Sbjct: 142 SEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVI 201
Query: 159 DYIIALSCTPPRVYRQVASLMGLQLVTSFISVAKMLGAQRETTQRQLNAEKKKRV---EG 215
+ LS + R +R ++L ++L+T+ ++VA L + TQRQ AE+ K +
Sbjct: 202 SLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRAN 261
Query: 216 PRVESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIRMSCIQSLGVWILSYPS 275
R+E L ++ +N ++E+MM IF G+FVHRYRD IR CI+ +G+W+ Y
Sbjct: 262 ERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAEIRAICIEEIGIWMKMYSD 321
Query: 276 FFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMIELADD 335
FL D YLKY+GWT++DK VR + ALQ LY + L LFT RF +R++ + D
Sbjct: 322 AFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSKLELFTSRFKDRIVSMTLD 381
Query: 336 IDVSVAVCAIGLVKQLLR--HQLLPDDDLGPLYDLLIDDPPEIRRAIGELVYDHLIAQKF 393
+ VAV AI L+ +L+ ++L +D +Y L+ + A GE +Y L +++
Sbjct: 382 KEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAGEFLYKKLFSRRD 441
Query: 394 NSSQSGLKGKDNDSSEVHLGRMLQILREFSADPILSIYVIDDVWE-YMKAMKDWKCIISM 452
+K + +L + L S + Y++D +W+ + +KDW+C+ S+
Sbjct: 442 PEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCATELLKDWECMNSL 501
Query: 453 LLDENPLID---LNDDDATNLIRLLSASVKKAVGERIVPASDNRKPYYNKAQKEVFENNK 509
LL+E PL L D + LI ++ ++++A K +K+ +++
Sbjct: 502 LLEE-PLSGEEALTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDR 560
Query: 510 REITRAMMKNYPRLLRKFMADKAKVPSLIDIVMHMKLELYSLKRDEKSFETILQLVNDAF 569
+IT P+LL K+ D KV +L+ + + LE+Y+ R EK + +L+ + +
Sbjct: 561 TKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNIV 620
Query: 570 FKHGEKEALRSCVKAIK-FCSAE-SQGELQDSARKNLKDVEDKLIAKLKSAIKAVL---- 623
KH + + L +C K C+ E + D +R L D+L K ++ L
Sbjct: 621 EKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLI---DELADKFNRLLEDFLQEGE 677
Query: 624 --DGDDEYSLLVNLKRLYELQLSKAVPIESLYEDLVMILHTF---RNLDNEVVSFLLLNL 678
D DD Y +L LKR+ + + L+ +L T ++ ++V L
Sbjct: 678 EPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIENGDMPEQIVIHALQCT 737
Query: 679 YLYLAWSLHSIINAETVSEASLASLLLKRNTLFEEL--EYFLNSPSEVEEGSRVGNQLAC 736
+ + W L I + + E L L K+ +F ++ Y N + V+E
Sbjct: 738 HYVILWQLAKITESSSTKEDLLR--LKKQMRVFCQICQHYLTNVNTTVKE---------- 785
Query: 737 RVCTILAEMWCLFRMTNFSSTK--LSRLGYCPDIPVLQKFWKLCEQQL--------NISD 786
+ TIL ++ +F S + L L Y PD + + + N +D
Sbjct: 786 QAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDNNSAD 845
Query: 787 ETEDEDVNKEYIEETNRDAVMIAAAKLIAIDSVPKEYLGPEIISHFVMHGTNVAEIVKHL 846
++++ +K IE ++ ++AA + + +V + +I ++ + + +I+K
Sbjct: 846 GQQEDEASK--IEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKET 903
Query: 847 ITVLKKKDE-DVSTIFLEALKRAYQRHAVEISRSDDKSLTEKSFVECKELSSRLSGTYVG 905
++ ++ D+ + + +L++ + E + D+S +F KEL+ R + T+ G
Sbjct: 904 MSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRS--SSTFSGIKELARRFALTF-G 960
Query: 906 AARNKHRSDILKTVKEGIDYAFLD--------APKQLSFLECAVLHFVSKLPTPD 952
+ K R I K+GI++AF + P L+FL+ + F SKL D
Sbjct: 961 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDI-LSEFSSKLLRQD 1014
>sp|O35638|STAG2_MOUSE Cohesin subunit SA-2 OS=Mus musculus GN=Stag2 PE=1 SV=3
Length = 1231
Score = 262 bits (670), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 238/951 (25%), Positives = 435/951 (45%), Gaps = 63/951 (6%)
Query: 39 LSLIEVIKGNGKLIPQVVKLWVERYEKDAKPAIAELLTMLFEACGAKYYLQGESLDEIDV 98
+ L EV+K + VV W+E Y+ D A+ +L+ + G K + E +
Sbjct: 82 MMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQN 141
Query: 99 DDVVVALVNLARRGEVEDYQSSKRKELKNFKDNLVSFWDNLVVECQNGPLFDKVLFDKCM 158
+++ + + + + K FK + F LV +CQ ++D+ + D +
Sbjct: 142 SEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVI 201
Query: 159 DYIIALSCTPPRVYRQVASLMGLQLVTSFISVAKMLGAQRETTQRQLNAEKKKRV---EG 215
+ LS + R +R ++L ++L+T+ ++VA L + TQRQ AE+ K +
Sbjct: 202 SLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRAN 261
Query: 216 PRVESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIRMSCIQSLGVWILSYPS 275
R+E L ++ +N ++E+MM IF G+FVHRYRD IR CI+ +G+W+ Y
Sbjct: 262 ERLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAEIRAICIEEIGIWMKMYSD 321
Query: 276 FFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMIELADD 335
FL D YLKY+GWT++DK VR + ALQ LY + L LFT RF +R++ + D
Sbjct: 322 AFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELNSKLELFTSRFKDRIVSMTLD 381
Query: 336 IDVSVAVCAIGLVKQLLR--HQLLPDDDLGPLYDLLIDDPPEIRRAIGELVYDHLIAQKF 393
+ VAV AI L+ +L+ ++L +D +Y L+ + A GE +Y L +++
Sbjct: 382 KEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAGEFLYKKLFSRRD 441
Query: 394 NSSQSGLKGKDNDSSEVHLGRMLQILREFSADPILSIYVIDDVWE-YMKAMKDWKCIISM 452
+K + +L + L S + Y++D +W+ + +KDW+C+ S+
Sbjct: 442 PEEDGLMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCATELLKDWECMNSL 501
Query: 453 LLDENPLID---LNDDDATNLIRLLSASVKKAVGERIVPASDNRKPYYNKAQKEVFENNK 509
LL+E PL L D + LI ++ ++++A K +K+ +++
Sbjct: 502 LLEE-PLSGEEALTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDR 560
Query: 510 REITRAMMKNYPRLLRKFMADKAKVPSLIDIVMHMKLELYSLKRDEKSFETILQLVNDAF 569
IT P+LL K+ D KV +L+ + + LE+Y+ R EK + +L+ + +
Sbjct: 561 TRITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNIV 620
Query: 570 FKHGEKEALRSCVKAIK-FCSAE-SQGELQDSARKNLKDVEDKLIAKLKSAIKAVL---- 623
KH + + L +C K C+ E + D +R L D+L K ++ L
Sbjct: 621 EKHTDTDVLEACSKTYHALCNEEFTIFNRVDISRSQLI---DELADKFNRLLEDFLQEGE 677
Query: 624 --DGDDEYSLLVNLKRLYELQLSKAVPIESLYEDLVMILHTF---RNLDNEVVSFLLLNL 678
D DD Y +L LKR+ + + L+ +L T ++ ++V L
Sbjct: 678 EPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFACNYKLLKTGIENGDMPEQIVIHALQCA 737
Query: 679 YLYLAWSLHSIINAETVSEASLASLLLKRNTLFEEL--EYFLNSPSEVEEGSRVGNQLAC 736
+ + W L I + + E L L K+ +F ++ Y N + V+E
Sbjct: 738 HYVILWQLAKITESTSTKEDLLR--LKKQMRVFCQICQHYLTNVNTTVKE---------- 785
Query: 737 RVCTILAEMWCLFRMTNFSSTK--LSRLGYCPDIPVLQKFWKLCEQQL--------NISD 786
+ TIL ++ +F S + L L Y PD + + + N +D
Sbjct: 786 QAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDDSNSAD 845
Query: 787 ETEDEDVNKEYIEETNRDAVMIAAAKLIAIDSVPKEYLGPEIISHFVMHGTNVAEIVKHL 846
++++ +K IE ++ ++AA + + +V + +I ++ + + +I+K
Sbjct: 846 GQQEDEASK--IEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKET 903
Query: 847 ITVLKKKDE-DVSTIFLEALKRAYQRHAVEISRSDDKSLTEKSFVECKELSSRLSGTYVG 905
++ ++ D+ + + +L++ + E + D+S +F KEL+ R + T+ G
Sbjct: 904 MSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRS--SSTFSGIKELARRFALTF-G 960
Query: 906 AARNKHRSDILKTVKEGIDYAFLD--------APKQLSFLECAVLHFVSKL 948
+ K R I K+GI++AF + P L+FL+ + F SKL
Sbjct: 961 LDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDI-LSEFSSKL 1010
>sp|Q99M76|STAG3_RAT Cohesin subunit SA-3 OS=Rattus norvegicus GN=Stag3 PE=2 SV=1
Length = 1256
Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 267/1020 (26%), Positives = 466/1020 (45%), Gaps = 77/1020 (7%)
Query: 41 LIEVIKGNGKLIPQVVKLWVERYEKDAKPAIAELLTMLFEACGAKYYLQGESLDEIDVDD 100
L + +K +V W+E Y++D EL+ ACG K + E + +
Sbjct: 115 LFDAVKAARSCAQSLVDEWLENYKQDENAGFLELVNFFIRACGCKSTVTPEMFKTMSNSE 174
Query: 101 VVVALVNLARRGEVEDYQSSKRKELKNFKDNLVSFWDNLVVECQNGPLFDKVLFDKCMDY 160
++ L + ++ K F+ + F LV +CQ LFD D +
Sbjct: 175 IIQHLTEEFNEDSGDYPLTAPGPSWKKFQGSFCEFVKTLVCQCQYSLLFDGFPMDDLISL 234
Query: 161 IIALSCTPPRVYRQVASLMGLQLVTSFISVAKMLGAQRETTQRQLNAEKKKRVE--GP-R 217
+I LS + R +R ++L ++L+TS + VA L ++ QRQ AE+ K E P R
Sbjct: 235 LIGLSDSQVRAFRHTSTLAAMKLMTSLVKVALQLSLHKDNNQRQYEAERNKGPEQRAPER 294
Query: 218 VESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIRMSCIQSLGVWILSYPSFF 277
+ESL ++ +N ++E MM IF G+FVHRYRDI P IR CI+ +G W+ SY + F
Sbjct: 295 LESLLEKRKEFQENQEEIEGMMNAIFRGVFVHRYRDILPEIRAVCIEEIGCWMQSYSTSF 354
Query: 278 LQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMIELADDID 337
L D YLKY+GWTL+DK VR V AL LY + + LFT RF +RM+ + D +
Sbjct: 355 LNDSYLKYIGWTLHDKHKEVRLKCVKALAGLYSNQELSSRMELFTNRFKDRMVSMVMDRE 414
Query: 338 VSVAVCAIGLVKQLLRHQ--LLPDDDLGPLYDLLIDDPPEIRRAIGELVYDHLIAQKFNS 395
VAV AI L+ +L++ +L D +Y ++ + + GE VY + + +
Sbjct: 415 SEVAVEAIRLLTLILKNMEGVLTSADCEKIYSIVYISNRAMASSAGEFVYWKIFHPECGA 474
Query: 396 SQSGLKGKDNDSSEVHLGRMLQILREF---SADPILSIYVIDDVWEYMKA-MKDWKCIIS 451
+ G++ S + +L F S + Y++D +W+ + +KDW+ + S
Sbjct: 475 --KAVSGRERRRSPQAQRTFIYLLLAFFMESEHHDHAAYLVDSLWDCAGSYLKDWESLTS 532
Query: 452 MLLDENPLIDLNDDDATNLIRLLSASVKKAV-GERIVPASDNRKPYYNKAQKEVFENNKR 510
+LL ++ +L D LI +L +S ++A G V +K K +K + +K
Sbjct: 533 LLLQKDQ--NLGDMQERMLIEILVSSARQAAEGHPPVGRITGKKSLTAKERK-LQAYDKV 589
Query: 511 EITRAMMKNYPRLLRKFMADKAKVPSLIDIVMHMKLELYSLKRDEKSFETILQLVNDAFF 570
++ ++ P+LL KF AD V L+ ++ + L +Y +R EK E +LQ + +
Sbjct: 590 KLAEHLIPLLPQLLAKFSADAENVAPLLRLLSYFDLNIYCTQRLEKHLELLLQQLQEVVV 649
Query: 571 KHGEKEALRSCVKAIK-FCSAE-SQGELQDSARKNLKD-VEDKLIAKLKSAIK-AVLDGD 626
KH E E L + A+ C E + D AR L D + D+ +L ++ + LD D
Sbjct: 650 KHVEPEVLEAAAHALYLLCKPEFTFFSRVDFARSQLVDLLTDRFQQELDDLMQSSFLDED 709
Query: 627 DEYSLLVNLKRLYELQLSKAVPIESLYEDLVMILHTFRN---LDNEVVSFLLLNLYLYLA 683
+ YSL LKRL + + + E +L + + ++V+ L +Y +
Sbjct: 710 EVYSLTATLKRLSAFYNAHDLTRWEISEPCSRLLRKAVDTGEVPHQVILPALTLVYFSIL 769
Query: 684 WSLHSIINAETVSEASLASLLLKRNTLFEEL--EYFLNSPSEVEEGSRVGNQLACRVCTI 741
W++ I +E+ S+ L S L KR F EL + E++E + V +
Sbjct: 770 WTVTHI--SESTSQKQLMS-LKKRMVAFCELCQSCLSDVDPEIQEQAFV----------L 816
Query: 742 LAEMWCLF--RMTNFSSTKLSRLGYCPDIPVLQKFWKLCEQQLNI------SDETEDEDV 793
L+++ +F +M L L + P+ + + + + + +++++ V
Sbjct: 817 LSDLLLIFSPQMVVGGRDFLRPLVFFPEATLQSELASFLMDHVFLQPGELGNGQSQEDHV 876
Query: 794 NKEYIEETNRDAVMIAAAKLIAIDSVPKEYLGPEIISHFVMHGTNVAEIVKHLITVLKKK 853
E + + R ++A + + V + ++ H+ + +I+K +T ++
Sbjct: 877 QIELLHQRRR---LLAGFCKLLLYGVLELDAASDVFKHYNKFYEDYGDIIKETLTRARQI 933
Query: 854 DE-DVSTIFLEALKRAYQRHAVEISRSDDKSLTE-KSFVECKELSSRLSGTYVGAARNKH 911
D S I L +LK+ Y E D LTE +F+E ++L+ R + ++ G + +
Sbjct: 934 DRCQCSRILLLSLKQLYTELIQEQGPQD---LTELPAFIEMRDLARRFALSF-GPQQLHN 989
Query: 912 RSDILKTVKEGIDYAFLD--------APKQLSFLECAVLHFVSKLPTPDILDILKDVQIR 963
R ++ KEGI ++ + P ++FLE + F +L D +L ++
Sbjct: 990 RDLVVMLHKEGIKFSLSELPPAGSSREPPNIAFLE-LLSEFSPRLFHQDKQLLLSYLEKC 1048
Query: 964 TDNVNMDEDPSG-WRPFKSFVETLREKYTKNEGIQEEKEAVTVRRRGRPR-KKRNIEGKR 1021
V+M PS W P ++ +L ++ EA + +G P KKR IE R
Sbjct: 1049 LQRVSM--APSHPWGPVTTYCHSLHL-------VENTAEASS---QGPPHSKKRCIEVPR 1096
>sp|Q9DGN0|STAG2_XENLA Cohesin subunit SA-2 OS=Xenopus laevis GN=stag2 PE=1 SV=1
Length = 1194
Score = 249 bits (636), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 232/924 (25%), Positives = 425/924 (45%), Gaps = 46/924 (4%)
Query: 39 LSLIEVIKGNGKLIPQVVKLWVERYEKDAKPAIAELLTMLFEACGAKYYLQGESLDEIDV 98
+ L EV+K + VV W+E Y+ A+ +L+ + G K + GE +
Sbjct: 13 MMLFEVVKMGKSAMQSVVDDWIEAYKHSKDVALLDLINFFIQCSGCKGVVSGEMFRHMQN 72
Query: 99 DDVVVALVNLARRGEVEDYQSSKRKELKNFKDNLVSFWDNLVVECQNGPLFDKVLFDKCM 158
+++ + + + + K FK + F LV +CQ ++D+ + D +
Sbjct: 73 SEIIRRMTEEFDEDSGDYPLTMAGPQWKKFKFSFCEFIGVLVRQCQYSIIYDEYMMDTVI 132
Query: 159 DYIIALSCTPPRVYRQVASLMGLQLVTSFISVAKMLGAQRETTQRQLNAEKKKRV---EG 215
+ LS + R +R ++L ++L+T+ ++VA L + TQRQ AE+ K +
Sbjct: 133 SLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRAN 192
Query: 216 PRVESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIRMSCIQSLGVWILSYPS 275
R+E L ++ +N ++E+MM IF G+FVHRYRD IR CI+ +GVW+ Y
Sbjct: 193 DRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAEIRAICIEEIGVWMKMYSD 252
Query: 276 FFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMIELADD 335
FL D YLKY+GWT++DK VR + ALQ LY + L LFT RF +R++ + D
Sbjct: 253 AFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNRELNTKLELFTSRFKDRIVSMTLD 312
Query: 336 IDVSVAVCAIGLVKQLLRH--QLLPDDDLGPLYDLLIDDPPEIRRAIGELVYDHLIAQKF 393
+ VAV AI L+ +L+ ++L +D +Y L+ + A GE +Y L + +
Sbjct: 313 KEYDVAVQAIKLLTLVLQSSDEVLTAEDCENVYHLVYSAHRPVAVAAGEFLYKKLFSCRD 372
Query: 394 NSSQSGLKGKDNDSSEVHLGRMLQILREFSADPILSIYVIDDVWE-YMKAMKDWKCIISM 452
+K + S +L + L S + Y++D +W+ + +KDW C+ S+
Sbjct: 373 PEEDGIMKRRGRLSPNANLVKTLVFFFLESELHEHAAYLVDSMWDCATELLKDWDCMNSL 432
Query: 453 LLDE--NPLIDLNDDDATNLIRLLSASVKKAVGERIVPASDNRKPYYNKAQKEVFENNKR 510
LLD+ N L D + LI +L +V++A K +K+ ++K
Sbjct: 433 LLDDPLNGEEALTDRQESALIEILLCTVRQAAECHPPVGRGTGKRVLTAKEKKSQMDDKT 492
Query: 511 EITRAMMKNYPRLLRKFMADKAKVPSLIDIVMHMKLELYSLKRDEKSFETILQLVNDAFF 570
+T + P+LL K+ D KV +L+ + + LE+Y+ R EK E +L+ + +
Sbjct: 493 HLTELFAVSLPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLEALLRQIRNIVE 552
Query: 571 KHGEKEALRSCVKAIK-FCSAE-SQGELQDSARKNLKD-VEDKLIAKLKSAIKAVLDGDD 627
KH + + L +C K C+ E + D A+ L D + DK L+ ++ + D+
Sbjct: 553 KHTDTDVLEACSKTYHALCNEEFTIYNRVDIAKSQLIDELADKFNRLLEDFLQEEEELDE 612
Query: 628 E--YSLLVNLKRLYELQLSKAVPIESLYEDLVMILHTF---RNLDNEVVSFLLLNLYLYL 682
+ Y +L LKR+ + + L+ +L T ++ ++V L + +
Sbjct: 613 DDAYQVLSTLKRITAFHNAHDLSRWDLFSGNYKLLKTGIENGDMPEQIVVHALQCTHYVI 672
Query: 683 AWSLHSIINAETVSEASLASLLLKRNTLFEEL--EYFLNSPSEVEEGSRVGNQLACRVCT 740
W L +ET S L ++ +F ++ Y N + V+E + T
Sbjct: 673 LWQLAKF--SETGSSKEELITLKRQMRVFCQICQHYLTNVNTAVKE----------QAFT 720
Query: 741 ILAEMWCLF--RMTNFSSTKLSRLGYCPDIPVLQKFWKLCEQQLNISDET--------ED 790
IL ++ +F ++ L L Y PD + + + I + +D
Sbjct: 721 ILCDVLMIFSHQIVVGGREALEPLVYSPDSSLQSELLSFILDHVFIDQDDDNSSSDGQQD 780
Query: 791 EDVNKEYIEETNRDAVMIAAAKLIAIDSVPKEYLGPEIISHFVMHGTNVAEIVKHLITVL 850
++ +K IE ++ ++AA + + +V + +I ++ + + +I+K ++
Sbjct: 781 DEASK--IEALHKRRNLLAAFCKLIVYNVVEMNTAADIFKQYMRYYNDYGDIIKETMSKT 838
Query: 851 KKKDE-DVSTIFLEALKRAYQRHAVEISRSDDKSLTEKSFVECKELSSRLSGTYVGAARN 909
++ D+ + + +L++ + E S + D+S +F KEL+ R + T+ G +
Sbjct: 839 RQIDKIQCAKTLILSLQQLFNEMIQEHSYNFDRS--SPTFSAIKELARRFALTF-GLDQL 895
Query: 910 KHRSDILKTVKEGIDYAFLDAPKQ 933
K R I K+GI++AF + Q
Sbjct: 896 KTREAIAMLHKDGIEFAFKEPSPQ 919
>sp|O70576|STAG3_MOUSE Cohesin subunit SA-3 OS=Mus musculus GN=Stag3 PE=1 SV=2
Length = 1240
Score = 248 bits (634), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 267/1053 (25%), Positives = 470/1053 (44%), Gaps = 85/1053 (8%)
Query: 11 PDDFEEIRPKTKRSRASEGTAASAQSIELS--LIEVIKGNGKLIPQVVKLWVERYEKDAK 68
P + + K+SR +S+ + L + +K + +V W++ Y++D
Sbjct: 83 PKAVPAAKHRKKQSRIVSSGNGKNESVPSTNYLFDAVKAARSCMQSLVDEWLDNYKQDEN 142
Query: 69 PAIAELLTMLFEACGAKYYLQGESLDEIDVDDVVVALVNLARRGEVEDYQSSKRKELKNF 128
EL+ ACG K + E + +++ L + ++ K F
Sbjct: 143 AGFLELINFFIRACGCKSTVTPEMFKTMSNSEIIQHLTEEFNEDSGDYPLTAPGPSWKKF 202
Query: 129 KDNLVSFWDNLVVECQNGPLFDKVLFDKCMDYIIALSCTPPRVYRQVASLMGLQLVTSFI 188
+ + F LV +CQ L+D D + +I LS + R +R ++L ++L+TS +
Sbjct: 203 QGSFCEFVKTLVYQCQYSLLYDGFPMDDLISLLIGLSDSQVRAFRHTSTLAAMKLMTSLV 262
Query: 189 SVAKMLGAQRETTQRQLNAEKKKRVE--GP-RVESLNKRLSMTHKNITDLEDMMRKIFTG 245
VA L ++ QRQ AE+ K E P R+ESL ++ +N D+E MM IF G
Sbjct: 263 KVALQLSLHKDNNQRQYEAERNKGPEQRAPERLESLLEKRKEFQENQEDIEGMMNAIFRG 322
Query: 246 LFVHRYRDIDPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLAL 305
+FVHRYRDI P IR CI+ +G W+ SY + FL D YLKY+GWTL+DK VR V AL
Sbjct: 323 VFVHRYRDILPEIRAICIEEIGYWMQSYSTSFLNDSYLKYIGWTLHDKHKEVRLKCVKAL 382
Query: 306 QNLYEVDDNVPTLGLFTERFSNRMIELADDIDVSVAVCAIGLVKQLLRHQ--LLPDDDLG 363
LY + + LFT RF +RM+ + D + VAV AI L+ +L++ +L D
Sbjct: 383 AGLYSNQELSLRMELFTNRFKDRMVSMVMDRECEVAVEAIRLLTLILKNMEGVLTSADCE 442
Query: 364 PLYDLLIDDPPEIRRAIGELVYDHLIAQKFNSSQSGLKG-------KDNDSSEVHLGRML 416
+Y ++ + + GE VY K + G K + + + + +L
Sbjct: 443 KIYSIVYISNRAMASSAGEFVY-----WKIFHPECGAKAVSDRERRRSPQAQKTFIYLLL 497
Query: 417 QILREFSADPILSIYVIDDVWEYMKA-MKDWKCIISMLLDENPLIDLNDDDATNLIRLLS 475
E S + Y++D +W+ + +KDW+ + ++LL ++ +L D LI +L
Sbjct: 498 AFFME-SEHHNHAAYLVDSLWDCAGSYLKDWESLTNLLLQKDQ--NLGDMQERMLIEILV 554
Query: 476 ASVKKAV-GERIVPASDNRKPYYNKAQKEVFENNKREITRAMMKNYPRLLRKFMADKAKV 534
+S ++A G V +K K +K + +K ++ ++ P+LL KF AD V
Sbjct: 555 SSARQAAEGHPPVGRITGKKSLTAKERK-LQAYDKMKLAEHLIPLLPQLLAKFSADAENV 613
Query: 535 PSLIDIVMHMKLELYSLKRDEKSFETILQLVNDAFFKHGEKEALRSCVKAIK-FCSAE-S 592
L+ ++ + L +Y +R EK E +LQ + + KH E E L + A+ C E +
Sbjct: 614 APLLQLLSYFDLSIYCTQRLEKHLELLLQQLQEVVVKHVEPEVLEAAAHALYLLCKPEFT 673
Query: 593 QGELQDSARKNLKD-VEDKLIAKLKSAIK-AVLDGDDEYSLLVNLKRLYELQLSKAVPIE 650
D AR L D + D+ +L ++ + LD D+ YSL LKRL + +
Sbjct: 674 FFSRVDFARSQLVDFLTDRFQQELDDLMQSSFLDEDEVYSLTATLKRLSAFYNAHDLTRW 733
Query: 651 SLYEDLVMILHTFRN---LDNEVVSFLLLNLYLYLAWSLHSIINAETVSEASLASLLLKR 707
+ E +L + + ++V+ L +Y + W++ I +E+ S L S L KR
Sbjct: 734 EISEPCSRLLRKAVDTGEVPHQVILPALTLVYFSILWTVTHI--SESTSHKQLMS-LKKR 790
Query: 708 NTLFEEL--EYFLNSPSEVEEGSRVGNQLACRVCTILAEMWCLF--RMTNFSSTKLSRLG 763
F EL + E++E + V +L+++ +F +M L L
Sbjct: 791 MVAFCELCQSCLSDVDPEIQEQAFV----------LLSDLLLIFSPQMIVGGRDFLRPLV 840
Query: 764 YCPDIPVLQKFWKLCEQQLNI------SDETEDEDVNKEYIEETNRDAVMIAAAKLIAID 817
+ P+ + + + + + +++++ V E + + R ++A + +
Sbjct: 841 FFPEATLQSELASFLMDHVFLQPGELGNGQSQEDHVQIELLHQRRR---LLAGFCKLLLY 897
Query: 818 SVPKEYLGPEIISHFVMHGTNVAEIVKHLITVLKKKDE-DVSTIFLEALKRAYQRHAVEI 876
V + ++ H+ + +I+K +T ++ D S I L +LK+ Y I
Sbjct: 898 GVLELDAASDVFKHYNKFYEDYGDIIKETLTRARQIDRCQCSRILLLSLKQLYTE---LI 954
Query: 877 SRSDDKSLTE-KSFVECKELSSRLSGTYVGAARNKHRSDILKTVKEGIDYAFLD------ 929
+ LTE +F+E ++L+ R + ++ G + +R ++ KEGI ++ +
Sbjct: 955 QEQGPQGLTELPAFIEMRDLARRFALSF-GPQQLHNRDLVVMLHKEGIKFSLSELPPAGS 1013
Query: 930 --APKQLSFLECAVLHFVSKLPTPDILDILKDVQIRTDNVNMDEDPSGWRPFKSFVETLR 987
P L+FLE + F +L D +L ++ V+ + W P ++ +L
Sbjct: 1014 SHEPPNLAFLE-LLSEFSPRLFHQDKRLLLSYLEKCLQRVSKAPN-HPWGPVTTYCHSLH 1071
Query: 988 EKYTKNEGIQEEKEAVTVRRRGRPR-KKRNIEG 1019
E RG P KKR +EG
Sbjct: 1072 PLEITAEA----------SPRGPPHSKKRCVEG 1094
>sp|O13816|SCC3_SCHPO Cohesin subunit psc3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=psc3 PE=1 SV=3
Length = 962
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 148/616 (24%), Positives = 270/616 (43%), Gaps = 71/616 (11%)
Query: 59 WVERYEKDAKPAIAELLTMLFEACGAKYYLQGESLDEIDVDDVVVALVNLA-RRGEVEDY 117
W Y KD + A+A L+ + + CG + + + D ++ + L+ R DY
Sbjct: 105 WFADYAKDNQSALANLINFILKCCGCNRAINVFDVQDQDSASATLSQIQLSVERTSTRDY 164
Query: 118 Q-SSKRKELKNFKDNLVSFWDNLVVECQ-NGPLFDKVLFDKCMDYIIALSCTPPRVYRQV 175
+SK + +NF+ L N V + L++ +F+ M +++A+S + R R
Sbjct: 165 PLNSKNLKFRNFRKRLTGLLSNFVSQLSIRNYLYNSTVFEDIMSWVVAMSSSTMRPIRHT 224
Query: 176 ASLMGLQLVTSFISVAKMLGAQRETTQRQLNAEKKK-RVEGPRVESLNKRLSMTHKNITD 234
A++ L ++T +K L + +QL E+K+ RV R+ LN L K
Sbjct: 225 ATVFCLNIMTFLCEKSKELLNEHAIATKQLEKEEKRSRVNRNRINELNNSLGEIVKQQDT 284
Query: 235 LEDMMRKIFTGLFVHRYRDIDPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKS 294
L + F +FVHRYRD++P IR+ C+Q LGVWI + PS F YL+YLGW L+D +
Sbjct: 285 LTTYLNDYFDSVFVHRYRDVEPKIRVDCLQELGVWINTVPSIFFSGSYLRYLGWMLSDIN 344
Query: 295 ASVRKSSVLALQNLYEVDDNVPTLGLFTERFSNRMIELAD-DIDVSVAVCAIGLVKQLLR 353
+VR + V L+ +E D + L F+ RF R++E++ D D+ V V +I L +
Sbjct: 345 TTVRLTVVKVLRKFFETDSFIGGLRHFSSRFKERILEMSCVDADIGVRVASIRLCNAMRT 404
Query: 354 HQLLPDDDLGPLYDLLIDDPPEIRR-AIGEL--VYDHLIAQKFN-----------SSQSG 399
L + ++ + L++D P ++R A+ L V D + +K + SQ+
Sbjct: 405 CGFLENSEILKVLKLILDINPRVQREAVLFLCKVVDESVNEKIDLWGEEDYILKAFSQTS 464
Query: 400 LKGKDNDSSEVH---LGRMLQILRE--------FSADPILSIY------------VIDDV 436
L + VH +M ++L E F D +L I+ + +
Sbjct: 465 LT-----TFSVHWIKFSQMCKLLEEVRLSYQSSFDYDTLLRIFQKNGNFITPITQALLNA 519
Query: 437 WEYMKAMKDWKCIISMLLDEN-------------PLIDLNDDDATNLIRLLSASVKKAVG 483
E + W+ I + +L +N LND + L++LLSAS++
Sbjct: 520 CEIDSIYQSWEDISNFVLFDNYTSTLKDPIDSILSFCKLNDFQESILLQLLSASIQTVCN 579
Query: 484 ERIVPASDNRKPYYNKAQKEVFENNKREITRAMMKNYPRLLRKFMADKAKVPSLID---- 539
+ K +NK E N++ + + N + + P+L+
Sbjct: 580 NNFITP----KTVHNKQAAET-TNDQNKDKDLLYLNLLPYINSITERNSASPTLLHDSLR 634
Query: 540 IVMHMKLELYSLKRDEKSFETILQLVNDAFFKHGEKEALRSCVKAIKFCSAESQGELQDS 599
++ M L + + + FE ++ + F + + + ++ C I F +S L++
Sbjct: 635 LLFSMDLTEMTDPQLSRHFELLINNLKKFFLTNNDLQIIQGC--TILFLRLDSIPALKED 692
Query: 600 ARKNLKDVEDKLIAKL 615
+ + D+ D+ + +
Sbjct: 693 LKLLVTDICDQTVTEF 708
>sp|P0CL83|ST3L1_HUMAN STAG3-like protein 1 OS=Homo sapiens GN=STAG3L1 PE=2 SV=1
Length = 205
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 40/210 (19%)
Query: 252 RDIDPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEV 311
RD+ P IR CI+ +G W+ SY + FL D YLKY+GWTL+DK VR V AL+ LY
Sbjct: 15 RDVLPEIRAICIEEIGCWMQSYSTSFLTDSYLKYIGWTLHDKHREVRVKCVKALKGLYGN 74
Query: 312 DDNVPTLGLFTERFSNRMIELADDIDVSVAVCAIGLVKQLLRHQLLPDDDLGPLYDLLID 371
D L LFT RF + M+ + D + SVAV A+ L+ +L+ L
Sbjct: 75 RDLTARLELFTGRFKDWMVSMIVDREYSVAVEAVRLLILILK---------------LFY 119
Query: 372 DPPEIRRAIGELVYDHLIAQKFNSSQSGLKGKDNDSSEVHLGRMLQILREFSADPIL--- 428
EIR + G++ S Q+L F + L
Sbjct: 120 PECEIRT---------------------MGGREQRQSPGAQRTFFQLLLSFFVESKLHDH 158
Query: 429 SIYVIDDVWEYMKA-MKDWKCIISMLLDEN 457
+ Y++D++W+ +KDW+ + S+LL+++
Sbjct: 159 AAYLVDNLWDCAGTQLKDWEGLTSLLLEKD 188
>sp|P0CL84|ST3L2_HUMAN STAG3-like protein 2 OS=Homo sapiens GN=STAG3L2 PE=2 SV=1
Length = 134
Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 252 RDIDPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEV 311
RD+ P IR CI+ +G W+ SY + FL D YLKY+GWTL+DK VR V AL+ LY
Sbjct: 15 RDVLPEIRAICIEEIGCWMQSYSTSFLTDSYLKYIGWTLHDKHREVRVKCVKALKGLYGN 74
Query: 312 DDNVPTLGLFTERFSNRMIELADDIDVSVAVCAIGLVKQLLRHQ--LLPDDDLGPLYDLL 369
D L LFT RF + M+ + D + SVAV A+ L+ +L++ +L D D +Y ++
Sbjct: 75 RDLTARLELFTGRFKDWMVSMIVDREYSVAVEAVRLLILILKNMEGVLMDVDCESVYPIV 134
>sp|P40541|SCC3_YEAST Cohesin subunit SCC3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=IRR1 PE=1 SV=1
Length = 1150
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 161/353 (45%), Gaps = 35/353 (9%)
Query: 52 IPQVVKLWVERYEKDAKPAIAELLTMLFEACGAKYYLQGESLDEIDVDDVVVALVNLA-R 110
I ++++ W+E Y ++ + E + +L CG+ ++ + + + + + L +
Sbjct: 149 IEELLREWLETYSENRDKFLQEFINLLLNCCGSVARVEDHDVHSNESSNETIGEIQLLFQ 208
Query: 111 RGEVEDYQ---SSKRKELKNFK-----DNLVSFWDNLVVECQNGPLF------------- 149
R ++ ++ S + K+ KNFK N F L+ + L
Sbjct: 209 RQKLHEFYLLISKENKKRKNFKMGPLYQNFAEFMTKLLEVANDLQLLYVESDEDDTQIVT 268
Query: 150 DKVLFDKCMDYIIALSCTPPRVYRQVASLMGLQLVTSFIS--VAKMLGAQRETTQRQLN- 206
++ D + ++ + S R +R +++L L L +++ + +QL+
Sbjct: 269 GNLVLD-LLTWLSSFSVCKIRCFRYISTL-TLYLFQDYLTQQAVNLEKNYLAKLSKQLSL 326
Query: 207 AEKKKRVEGPRVESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIRMSCIQSL 266
EKKKR +E L ++ T + ++ ++ I FVHRY+D+ IR + L
Sbjct: 327 EEKKKRPNNKTLEKLESTIAETQGSKVVIDSIIDNIVKLCFVHRYKDVSDLIRSESMLHL 386
Query: 267 GVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLY------EVDDNVPTLGL 320
+WI +YP +FL+ +LKY GW L+D S SVR L +L + DN +
Sbjct: 387 SIWIKNYPEYFLKVTFLKYFGWLLSDNSVSVRLQVTKILPHLIIQNHNSKSTDNSAIRQV 446
Query: 321 FTERFSNRMIELA-DDIDVSVAVCAIGLVKQLLRHQLLPDDDLGPLYDLLIDD 372
F ERF +++E+A D+++ V + +I ++ + L D ++ + L+ D+
Sbjct: 447 F-ERFKTKILEVAIRDVNLDVRIHSIQVLTEASSLGYLDDSEILIISSLMFDE 498
>sp|P0CL85|ST3L3_HUMAN STAG3-like protein 3 OS=Homo sapiens GN=STAG3L3 PE=2 SV=1
Length = 134
Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 252 RDIDPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLYEV 311
RD+ P IR CI+ +G W+ SY + FL D YLKY+GWTL+DK VR V AL+ LY
Sbjct: 15 RDVLPEIRAICIEEIGCWMQSYSTSFLTDSYLKYIGWTLHDKHREVRVKCVKALKGLYGN 74
Query: 312 DDNVPTLGLFTERFSNRMIELADDIDVSVAVCAIGLVKQLLRHQ--LLPDDDLGPLYDLL 369
D L LFT F + M+ + D + SVAV A+ L+ +L++ +L D D +Y ++
Sbjct: 75 RDLTARLELFTGCFKDWMVSMIMDREYSVAVEAVRLLILILKNMEGVLMDVDCESVYPIV 134
>sp|Q92380|REC11_SCHPO Meiotic recombination protein rec11 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rec11 PE=4 SV=1
Length = 923
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 140/354 (39%), Gaps = 49/354 (13%)
Query: 52 IPQVVKLWVERYEKDAKPAIAELLTMLFEACGAKYYLQGESLDEIDVDDVVVALVNLARR 111
+ Q+ + + E Y+ ++ + + A G + ++ D DVD + L + R
Sbjct: 98 LEQLSQHYFEDYKSNSADFMLTFINFALVASGCQPFVTN--FDVQDVDSIPETLSQVNRS 155
Query: 112 G------EVEDY-QSSKRKELKN----FKDNLVSFWDNLVVECQNGPLFDKVLFDKCMD- 159
DY +S KE K F+ LV F + VE D L D M+
Sbjct: 156 SFQKSSCAYTDYLYTSNSKEAKTVRIRFQLFLVEFISKVYVE-------DAFLGDSFMET 208
Query: 160 ---YIIALSCTPPRVYRQVASLMGLQLVTSFISVAKMLGAQRETTQRQLNAEKKKRVEGP 216
+I ++ +P + R A+ + ++ + L + T L
Sbjct: 209 TKAWIFTMTTSPWMLVRHTATTICCDIMRCLCLIVNKLSEKSNQTAEIL----------- 257
Query: 217 RVESLNKRLSMTHKNITDLEDMMRKIFTGLFVHRYRDIDPNIRMSCIQSLGVWILSYPSF 276
+ L R DM+ I + R DI +IR+ C+ +L P++
Sbjct: 258 VLRDLTSRFI----------DMIHDICDSVLFSRIHDIRASIRIVCVTALYDCCQLLPTY 307
Query: 277 FLQDLYLKYLGWTLNDKSASVRKSSVLALQNL--YEVDDNVPTLGLFTERFSNRMIELAD 334
+ +++ GW L+D + +RK S+ + L +E + + + F +RFS R++E+
Sbjct: 308 LINRNLIRHSGWGLSDAESQIRKISLKIIDYLSSHEPEKDQDFVVDFLDRFSLRIVEICR 367
Query: 335 -DIDVSVAVCAIGLVKQLLRHQLLPDDDLGPLYDLLIDDPPEIRRAIGELVYDH 387
DID SV A+ ++L+ L + + + D P+ R + ++ H
Sbjct: 368 YDID-SVRSVALKTCEKLMEKISLNGKCINIVSSCIFDGKPQNRISTMRILVAH 420
>sp|Q8TBR4|STG34_HUMAN STAG3-like protein 4 OS=Homo sapiens GN=STAG3L4 PE=2 SV=1
Length = 150
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 126 KNFKDNLVSFWDNLVVECQNGPLFDKVLFDKCMDYIIALSCTPPRVYRQVASLMGLQLVT 185
K F+ + F LV CQ L D D + + S + + ++L ++L+T
Sbjct: 44 KKFQGSFCEFVGTLVCRCQYILLHDDFPMDNLISLLTGFSDSQVCAFCHTSTLAAMKLMT 103
Query: 186 SFISVAKMLGAQRETTQRQLNAEKKKRVEGP------RVESL 221
S + VA L + QRQ AE+ K GP R+ESL
Sbjct: 104 SLVRVALQLSLHEDINQRQYEAERNK---GPGQRAPERLESL 142
>sp|Q8CIG0|DEP1A_MOUSE DEP domain-containing protein 1A OS=Mus musculus GN=Depdc1a PE=1
SV=1
Length = 804
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 34/151 (22%)
Query: 789 EDEDVNKEYIEETNRDAVMIAAAKLIAIDSVPKEYLGP-EIISHFVMHGTNVAEIVKHLI 847
+++++++E +EE R +MI ++++ S+ +E L P ++I ++M+ N+A KH +
Sbjct: 178 DNQEISQEDVEEVWRYVIMIYLQTILSLPSI-EELLNPNQVIPQYIMY--NMANTSKHGV 234
Query: 848 TVLKKKDEDVSTIFLEALKRAYQRHAVEISRSDDKSLTEKSFVECKELSSRLSGTYVGAA 907
+L+ K +D+ L A+K RS+D + + TYVG
Sbjct: 235 VILQDKSDDLPHWVLSAMK-----CLANWPRSNDTN----------------NLTYVGFE 273
Query: 908 RNKHRSDILKTVKEGIDYAFLDAPKQLSFLE 938
R D+ KT+ DY FL+ P+ L E
Sbjct: 274 R-----DVFKTIA---DY-FLNLPEPLLTFE 295
>sp|Q552Q7|PDS5_DICDI Sister chromatid cohesion protein PDS5 homolog OS=Dictyostelium
discoideum GN=pds5 PE=3 SV=1
Length = 1450
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 250 RYRDIDPNIRMSCIQSLGVWILSYPSFFLQDLYLKYLGWTLNDKSASVRKSSVLALQNLY 309
R+RD +P+IR+ IQ +I+ P +L +YL + DK + VRK + ++L ++
Sbjct: 516 RFRDSEPDIRIKAIQIFQKYIIKNPELMNPELMSEYLE-RVRDKDSKVRKDAEISLSTVW 574
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 389,623,184
Number of Sequences: 539616
Number of extensions: 16715266
Number of successful extensions: 95617
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 378
Number of HSP's that attempted gapping in prelim test: 85972
Number of HSP's gapped (non-prelim): 5636
length of query: 1096
length of database: 191,569,459
effective HSP length: 128
effective length of query: 968
effective length of database: 122,498,611
effective search space: 118578655448
effective search space used: 118578655448
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)