BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001346
(1095 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 599 bits (1545), Expect = e-171, Method: Compositional matrix adjust.
Identities = 353/857 (41%), Positives = 505/857 (58%), Gaps = 53/857 (6%)
Query: 157 KKLRVWCRLEDGKWESGMI--QSTSGDEAFVL-LSNGNVVKV----STGELLPA-NPDIL 208
K RVW + W+S + GD+ L L G ++ T EL P NPDIL
Sbjct: 9 KYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELPPLRNPDIL 68
Query: 209 EGVDDLIQLSYLNEPSVLNNIQYRY-SRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYR 267
G +DL LSYL+EP+VL+N++ R+ +IY+ G VL+A+NP++ +PIYG I AY
Sbjct: 69 VGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYS 128
Query: 268 QKVMDS--PHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSE 325
+ M PH++A+A+ AY +M D NQSII+SGESGAGKT +AK+AM+Y A + G +
Sbjct: 129 GQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSAS 188
Query: 326 --GIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSR 383
+E ++L +N I+E+ GNAKT+RNDNSSRFGK IEI F +I GA ++T+LLEKSR
Sbjct: 189 EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSR 248
Query: 384 VVQLAAGERSYHIFYQLCAGA--PSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFH 441
VV A ER+YHIFYQLCA A P F + L L AN ++Y Q IDG+DDA+
Sbjct: 249 VVFQAEEERNYHIFYQLCASAALPEF--KTLRLGNANYFHYTKQGGSPVIDGIDDAKEMV 306
Query: 442 NLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGC 501
N +A ++ I + F +LA +L LGN+ F D+++ + +T LMG
Sbjct: 307 NTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGV 366
Query: 502 SSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLE-V 560
+E+ L K+ ++ K ++ AI++RDALAK IY +LF+WIV+ +NK+L
Sbjct: 367 DYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHST 426
Query: 561 GKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDW 620
KQ + I +LDIYGFE+F+ NSFEQFCINYANE+LQQ FN H+FKLEQEEY + + W
Sbjct: 427 VKQHS--FIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPW 484
Query: 621 TRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKL-KQHLGSNSCFKGER- 678
T ++F DN+ C+NLIE K +GVL LLDEE PK +D T+A KL HL + F+ R
Sbjct: 485 TLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRL 543
Query: 679 -GRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLL-SSCTCQVL-QLFXXXXXXXXXX 735
+AF I+H+A +V Y GFLEKN+D + + I++L SS ++L +LF
Sbjct: 544 SNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPT 603
Query: 736 XXXXXXXXXLD----------------TQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIK 779
L K++VG +F+ L LM L T PH++RCIK
Sbjct: 604 SATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIK 663
Query: 780 PNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQD 839
PN + P ++E +QQ R CGVLE +RIS +G+P+R +QEF RY VL+ +K + D
Sbjct: 664 PNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSD 723
Query: 840 PLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQ-AIIRLQKCFRGYQA 898
VL++ + + YQ G TK++ R+GQ+A LE R L+ A IR+QK RG+
Sbjct: 724 RKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLM 783
Query: 899 RSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPE---------IRDEQLRE-II 948
R ++ + IT+Q + RG R L ++ +A++ + R + +R+ I
Sbjct: 784 RKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATI 843
Query: 949 CLQSAIRGWLVRKQLKM 965
LQ+ +RG+LVR + +M
Sbjct: 844 ALQALLRGYLVRNKYQM 860
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 580 bits (1495), Expect = e-165, Method: Compositional matrix adjust.
Identities = 324/739 (43%), Positives = 460/739 (62%), Gaps = 36/739 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 54 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 113
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 114 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 173
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 174 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 233
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F++ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 234 EAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 293
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 294 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 353
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 354 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 411
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C R I +LDI
Sbjct: 412 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CQERKAYFIGVLDI 466
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 467 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 526
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 527 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 585
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 586 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 639
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 640 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 696
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE Y+ G TK++
Sbjct: 697 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIF 756
Query: 867 LRSGQLAALEDRRKQVLQA 885
R+GQLA +E+ R+Q L++
Sbjct: 757 FRAGQLARIEEAREQRLES 775
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 580 bits (1495), Expect = e-165, Method: Compositional matrix adjust.
Identities = 323/734 (44%), Positives = 457/734 (62%), Gaps = 36/734 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 43 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 102
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 103 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 162
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 163 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 222
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F++ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 223 EAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 282
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 283 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 342
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 343 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 400
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C R I +LDI
Sbjct: 401 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CQERKAYFIGVLDI 455
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
YGFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 456 YGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 515
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 516 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 574
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 575 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 628
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 629 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 685
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE Y+ G TK++
Sbjct: 686 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIF 745
Query: 867 LRSGQLAALEDRRK 880
R+GQLA +E+ R+
Sbjct: 746 FRAGQLARIEEARE 759
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 580 bits (1494), Expect = e-165, Method: Compositional matrix adjust.
Identities = 324/739 (43%), Positives = 460/739 (62%), Gaps = 36/739 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 42 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 101
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 102 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 161
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 162 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 221
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F++ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 222 EAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 281
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 282 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 341
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 342 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 399
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C R I +LDI
Sbjct: 400 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CQERKAYFIGVLDI 454
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 455 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 514
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 515 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 573
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 574 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 627
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 628 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 684
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE Y+ G TK++
Sbjct: 685 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIF 744
Query: 867 LRSGQLAALEDRRKQVLQA 885
R+GQLA +E+ R+Q L++
Sbjct: 745 FRAGQLARIEEAREQRLES 763
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 580 bits (1494), Expect = e-165, Method: Compositional matrix adjust.
Identities = 324/739 (43%), Positives = 460/739 (62%), Gaps = 36/739 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 54 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 113
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 114 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 173
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 174 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 233
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F++ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 234 EAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 293
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 294 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 353
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 354 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 411
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C R I +LDI
Sbjct: 412 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CQERKAYFIGVLDI 466
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 467 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 526
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 527 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 585
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 586 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 639
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 640 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 696
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE Y+ G TK++
Sbjct: 697 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIF 756
Query: 867 LRSGQLAALEDRRKQVLQA 885
R+GQLA +E+ R+Q L++
Sbjct: 757 FRAGQLARIEEAREQRLES 775
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 579 bits (1493), Expect = e-165, Method: Compositional matrix adjust.
Identities = 324/740 (43%), Positives = 459/740 (62%), Gaps = 36/740 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 54 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 113
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 114 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 173
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 174 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 233
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F++ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 234 EAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 293
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 294 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 353
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 354 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 411
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C R I +LDI
Sbjct: 412 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CQERKAYFIGVLDI 466
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 467 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 526
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 527 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 585
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 586 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 639
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 640 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 696
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE Y+ G TK++
Sbjct: 697 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIF 756
Query: 867 LRSGQLAALEDRRKQVLQAI 886
R+GQLA +E+ R+Q + I
Sbjct: 757 FRAGQLARIEEAREQRISEI 776
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 579 bits (1492), Expect = e-165, Method: Compositional matrix adjust.
Identities = 324/740 (43%), Positives = 459/740 (62%), Gaps = 36/740 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 54 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 113
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 114 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 173
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 174 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 233
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F++ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 234 EAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 293
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 294 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 353
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 354 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 411
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C R I +LDI
Sbjct: 412 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CQERKAYFIGVLDI 466
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 467 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 526
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 527 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 585
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 586 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 639
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 640 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 696
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE Y+ G TK++
Sbjct: 697 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIF 756
Query: 867 LRSGQLAALEDRRKQVLQAI 886
R+GQLA +E+ R+Q + I
Sbjct: 757 FRAGQLARIEEAREQRISEI 776
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 578 bits (1490), Expect = e-165, Method: Compositional matrix adjust.
Identities = 322/734 (43%), Positives = 457/734 (62%), Gaps = 36/734 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 43 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 102
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 103 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 162
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 163 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 222
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F++ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 223 EAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 282
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 283 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 342
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 343 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 400
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C R I +LDI
Sbjct: 401 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CQERKAYFIGVLDI 455
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
YGFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 456 YGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 515
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 516 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 574
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 575 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 628
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 629 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 685
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE ++ G TK++
Sbjct: 686 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIF 745
Query: 867 LRSGQLAALEDRRK 880
R+GQLA +E+ R+
Sbjct: 746 FRAGQLARIEEARE 759
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 577 bits (1488), Expect = e-164, Method: Compositional matrix adjust.
Identities = 324/739 (43%), Positives = 459/739 (62%), Gaps = 36/739 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 42 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 101
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 102 FHNLRVRYNQDLIYTYSGLFLVAVNPFKIIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 161
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 162 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 221
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F++ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 222 EAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 281
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 282 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 341
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 342 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 399
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V +IN L C R I +LDI
Sbjct: 400 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVL-----CQERKAYFIGVLDI 454
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 455 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 514
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 515 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 573
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 574 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 627
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 628 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 684
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE Y+ G TK++
Sbjct: 685 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIF 744
Query: 867 LRSGQLAALEDRRKQVLQA 885
R+GQLA +E+ R+Q L++
Sbjct: 745 FRAGQLARIEEAREQRLES 763
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 577 bits (1486), Expect = e-164, Method: Compositional matrix adjust.
Identities = 329/779 (42%), Positives = 469/779 (60%), Gaps = 46/779 (5%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 43 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 102
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 103 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 162
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 163 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 222
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSS FGK IEI F+ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 223 EAFGNAKTTRNNNSSEFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 282
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D F +A+DIV +E++
Sbjct: 283 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQM 342
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 343 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 400
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C+ R I +LDI
Sbjct: 401 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CSERKAYFIGVLDI 455
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FK+EQEEY + ++WT ++F D++ ++
Sbjct: 456 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATID 515
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 516 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 574
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 575 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 628
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 629 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 685
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE Y+ G TK++
Sbjct: 686 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIF 745
Query: 867 LRSGQLAALEDRRKQ----------VLQAIIRLQKCFRGYQARSRFRELCNGVITLQSF 915
R+GQLA +E+ R+Q L+ L + QA R+ + + ++QSF
Sbjct: 746 FRAGQLARIEEAREQRLGSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSF 804
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 576 bits (1485), Expect = e-164, Method: Compositional matrix adjust.
Identities = 322/734 (43%), Positives = 456/734 (62%), Gaps = 36/734 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 43 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 102
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 103 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 162
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 163 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 222
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F++ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 223 EAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 282
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 283 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 342
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 343 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 400
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C R I +LDI
Sbjct: 401 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CQERKAYFIGVLDI 455
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 456 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 515
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 516 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 574
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 575 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 628
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 629 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 685
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE Y+ G TK++
Sbjct: 686 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIF 745
Query: 867 LRSGQLAALEDRRK 880
R+GQLA +E+ R+
Sbjct: 746 FRAGQLARIEEARE 759
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 576 bits (1485), Expect = e-164, Method: Compositional matrix adjust.
Identities = 322/734 (43%), Positives = 456/734 (62%), Gaps = 36/734 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 43 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 102
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 103 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 162
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 163 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 222
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F++ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 223 EAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 282
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 283 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 342
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 343 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 400
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C R I +LDI
Sbjct: 401 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CQERKAYFIGVLDI 455
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 456 EGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 515
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 516 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 574
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 575 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 628
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 629 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 685
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE Y+ G TK++
Sbjct: 686 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIF 745
Query: 867 LRSGQLAALEDRRK 880
R+GQLA +E+ R+
Sbjct: 746 FRAGQLARIEEARE 759
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 576 bits (1484), Expect = e-164, Method: Compositional matrix adjust.
Identities = 322/734 (43%), Positives = 456/734 (62%), Gaps = 36/734 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D S+G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 43 ERDSYECGEIVSETSDSFTFKTSDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 102
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 103 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 162
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 163 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 222
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F+ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 223 EAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 282
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 283 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 342
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 343 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 400
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C R I +LDI
Sbjct: 401 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CQERKAYFIGVLDI 455
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 456 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 515
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 516 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 574
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 575 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 628
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 629 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 685
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE ++ G TK++
Sbjct: 686 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIF 745
Query: 867 LRSGQLAALEDRRK 880
R+GQLA +E+ R+
Sbjct: 746 FRAGQLARIEEARE 759
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 575 bits (1482), Expect = e-164, Method: Compositional matrix adjust.
Identities = 322/734 (43%), Positives = 455/734 (61%), Gaps = 36/734 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 43 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 102
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 103 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 162
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 163 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 222
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F+ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 223 EAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 282
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 283 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 342
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 343 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 400
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C R I +LDI
Sbjct: 401 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CQERKAYFIGVLDI 455
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 456 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 515
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 516 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 574
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 575 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 628
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 629 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 685
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE Y+ G TK++
Sbjct: 686 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIF 745
Query: 867 LRSGQLAALEDRRK 880
R+GQLA +E+ R+
Sbjct: 746 FRAGQLARIEEARE 759
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 575 bits (1482), Expect = e-164, Method: Compositional matrix adjust.
Identities = 321/734 (43%), Positives = 456/734 (62%), Gaps = 36/734 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 43 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 102
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 103 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 162
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 163 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 222
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+N+SRFGK IEI F++ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 223 EAFGNAKTTRNNNASRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 282
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 283 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 342
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 343 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 400
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C R I +LDI
Sbjct: 401 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CQERKAYFIGVLDI 455
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 456 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 515
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 516 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 574
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 575 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 628
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 629 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 685
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE Y+ G TK++
Sbjct: 686 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIF 745
Query: 867 LRSGQLAALEDRRK 880
R+GQLA +E+ R+
Sbjct: 746 FRAGQLARIEEARE 759
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 575 bits (1481), Expect = e-164, Method: Compositional matrix adjust.
Identities = 321/734 (43%), Positives = 456/734 (62%), Gaps = 36/734 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 43 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 102
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 103 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 162
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 163 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 222
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F++ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 223 EAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 282
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 283 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 342
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 343 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 400
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C R I +LDI
Sbjct: 401 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CEERKAYFIGVLDI 455
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 456 EGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 515
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 516 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 574
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 575 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 628
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 629 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 685
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE ++ G TK++
Sbjct: 686 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIF 745
Query: 867 LRSGQLAALEDRRK 880
R+GQLA +E+ R+
Sbjct: 746 FRAGQLARIEEARE 759
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 575 bits (1481), Expect = e-164, Method: Compositional matrix adjust.
Identities = 321/734 (43%), Positives = 455/734 (61%), Gaps = 36/734 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 42 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 101
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 102 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 161
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 162 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 221
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F++ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 222 EAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 281
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 282 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 341
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 342 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 399
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C R I +LDI
Sbjct: 400 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CQERKAYFIGVLDI 454
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 455 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 514
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 515 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 573
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 574 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 627
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC VLE +
Sbjct: 628 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNAVLEGI 684
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE Y+ G TK++
Sbjct: 685 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIF 744
Query: 867 LRSGQLAALEDRRK 880
R+GQLA +E+ R+
Sbjct: 745 FRAGQLARIEEARE 758
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 575 bits (1481), Expect = e-164, Method: Compositional matrix adjust.
Identities = 321/734 (43%), Positives = 454/734 (61%), Gaps = 36/734 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D S+G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 43 ERDSYECGEIVSETSDSFTFKTSDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 102
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 103 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 162
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 163 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 222
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F+ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 223 EAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTTERNYHIFY 282
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D F +A+DIV +E++
Sbjct: 283 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQM 342
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 343 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 400
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C+ R I +LDI
Sbjct: 401 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CSERKAYFIGVLDI 455
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FK+EQEEY + ++WT ++F D++ ++
Sbjct: 456 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATID 515
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 516 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 574
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 575 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFL------ 628
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 629 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEAI 685
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY L + ++D + AVL+ N+ PE ++ G TK++
Sbjct: 686 RITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIF 745
Query: 867 LRSGQLAALEDRRK 880
R+GQLA +E+ R+
Sbjct: 746 FRAGQLARIEEARE 759
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 574 bits (1480), Expect = e-164, Method: Compositional matrix adjust.
Identities = 321/734 (43%), Positives = 455/734 (61%), Gaps = 36/734 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 43 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 102
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 103 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 162
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 163 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 222
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F+ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 223 EAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 282
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 283 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 342
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 343 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 400
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C R I +LDI
Sbjct: 401 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CQERKAYFIGVLDI 455
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FK+EQEEY + ++WT ++F D++ ++
Sbjct: 456 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATID 515
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 516 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 574
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 575 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 628
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 629 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 685
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE Y+ G TK++
Sbjct: 686 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIF 745
Query: 867 LRSGQLAALEDRRK 880
R+GQLA +E+ R+
Sbjct: 746 FRAGQLARIEEARE 759
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 574 bits (1480), Expect = e-164, Method: Compositional matrix adjust.
Identities = 335/790 (42%), Positives = 470/790 (59%), Gaps = 43/790 (5%)
Query: 157 KKLRVWCRLEDGKWESGMI--QSTSGDEAFVL-LSNGN----VVKVSTGELLPA-NPDIL 208
K RVW + W+S + GD+ L L G + T EL P NPDIL
Sbjct: 9 KYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELPPLRNPDIL 68
Query: 209 EGVDDLIQLSYLNEPSVLNNIQYRY-SRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYR 267
G +DL LSYL+EP+VL+N++ R+ +IY+ G VL+A+NP++ +PIYG I AY
Sbjct: 69 VGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYS 128
Query: 268 QKVMDS--PHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSE 325
+ M PH++A+A+ AY +M D NQSII+SGESGAGKT +AK+AM+Y A + G +
Sbjct: 129 GQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSAS 188
Query: 326 --GIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSR 383
+E ++L +N I+E+ GNAKT+RNDNSSRFGK IEI F +I GA ++T+LLEKSR
Sbjct: 189 EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSR 248
Query: 384 VVQLAAGERSYHIFYQLCAGA--PSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFH 441
VV A ER+YHIFYQLCA A P F + L L AN ++Y Q IDG+DDA+
Sbjct: 249 VVFQAEEERNYHIFYQLCASAALPEF--KTLRLGNANYFHYTKQGGSPVIDGIDDAKEMV 306
Query: 442 NLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGC 501
N +A ++ I + F +LA +L LGN+ F D+++ + +T LMG
Sbjct: 307 NTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGV 366
Query: 502 SSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLE-V 560
+E+ L K+ ++ K ++ AI++RDALAK IY +LF+WIV+ +NK+L
Sbjct: 367 DYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHST 426
Query: 561 GKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDW 620
KQ + I +LDIYGFE+F+ NSFEQFCINYANE+LQQ FN H+FKLEQEEY + + W
Sbjct: 427 VKQHS--FIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPW 484
Query: 621 TRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKL-KQHLGSNSCFKGER- 678
T ++F DN+ C+NLIE K +GVL LLDEE PK +D T+A KL HL + F+ R
Sbjct: 485 TLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRL 543
Query: 679 -GRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLL-SSCTCQVL-QLFXXXXXXXXXX 735
+AF I+H+A +V Y GFLEKN+D + + I++L SS ++L +LF
Sbjct: 544 SNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPT 603
Query: 736 XXXXXXXXXLD----------------TQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIK 779
L K++VG +F+ L LM L T PH++RCIK
Sbjct: 604 SATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIK 663
Query: 780 PNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQD 839
PN + P ++E +QQ R CGVLE +RIS +G+P+R +QEF RY VL+ +K + D
Sbjct: 664 PNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSD 723
Query: 840 PLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQ-AIIRLQKCFRGYQA 898
VL++ + + YQ G TK++ R+GQ+A LE R L+ A IR+QK RG+
Sbjct: 724 RKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLM 783
Query: 899 RSRFRELCNG 908
R ++ + G
Sbjct: 784 RKKYMRMRRG 793
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 574 bits (1480), Expect = e-164, Method: Compositional matrix adjust.
Identities = 321/734 (43%), Positives = 455/734 (61%), Gaps = 36/734 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D S+G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 43 ERDSYECGEIVSETSDSFTFKTSDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 102
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 103 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 162
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 163 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 222
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F+ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 223 EAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTTERNYHIFY 282
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D + F +A+DIV +E++
Sbjct: 283 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEEEFKITRQAMDIVGFSQEEQM 342
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 343 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 400
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C+ R I +LDI
Sbjct: 401 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CSERKAYFIGVLDI 455
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FK+EQEEY + ++WT ++F D++ ++
Sbjct: 456 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATID 515
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 516 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 574
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 575 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 628
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 629 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 685
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY L + ++D + AVL+ N+ PE ++ G TK++
Sbjct: 686 RITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIF 745
Query: 867 LRSGQLAALEDRRK 880
R+GQLA +E+ R+
Sbjct: 746 FRAGQLARIEEARE 759
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 573 bits (1478), Expect = e-163, Method: Compositional matrix adjust.
Identities = 321/734 (43%), Positives = 455/734 (61%), Gaps = 36/734 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 43 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 102
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 103 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 162
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 163 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 222
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F+ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 223 EAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 282
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D F +A+DIV +E++
Sbjct: 283 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQM 342
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 343 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 400
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C+ R+ I +LDI
Sbjct: 401 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CSERAAYFIGVLDI 455
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FK+EQEEY + ++WT ++F D++ ++
Sbjct: 456 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATID 515
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 516 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 574
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 575 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 628
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 629 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 685
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE Y+ G TK++
Sbjct: 686 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIF 745
Query: 867 LRSGQLAALEDRRK 880
R+GQLA +E+ R+
Sbjct: 746 FRAGQLARIEEARE 759
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 573 bits (1476), Expect = e-163, Method: Compositional matrix adjust.
Identities = 321/734 (43%), Positives = 455/734 (61%), Gaps = 36/734 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 42 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 101
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 102 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 161
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 162 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 221
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F++ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 222 EAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 281
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 282 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 341
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 342 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 399
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C R I +LDI
Sbjct: 400 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CQERKAYFIGVLDI 454
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 455 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 514
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 515 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 573
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 574 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 627
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC VLE +
Sbjct: 628 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNVVLEGI 684
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY +L + ++D + AVL+ N+ PE Y+ G TK++
Sbjct: 685 RITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIF 744
Query: 867 LRSGQLAALEDRRK 880
R+GQLA +E+ R+
Sbjct: 745 FRAGQLARIEEARE 758
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 572 bits (1475), Expect = e-163, Method: Compositional matrix adjust.
Identities = 320/734 (43%), Positives = 454/734 (61%), Gaps = 36/734 (4%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D S+G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 43 ERDSYECGEIVSETSDSFTFKTSDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 102
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 103 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 162
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 163 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 222
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F+ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 223 EAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSTSERNYHIFY 282
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D F +A+DIV +E++
Sbjct: 283 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQM 342
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 343 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 400
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C+ R I +LDI
Sbjct: 401 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CSERKAYFIGVLDI 455
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FK+EQE+Y + ++WT ++F D++ ++
Sbjct: 456 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEKYLKEKINWTFIDFGLDSQATID 515
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 516 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 574
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 575 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFL------ 628
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 629 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 685
Query: 808 RISRSGYPTRMRHQEFAGRYGVLLSE-KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLY 866
RI+R G+P R+ + +F RY L + ++D + AVL+ N+ PE ++ G TK++
Sbjct: 686 RITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIF 745
Query: 867 LRSGQLAALEDRRK 880
R+GQLA +E+ R+
Sbjct: 746 FRAGQLARIEEARE 759
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 560 bits (1442), Expect = e-159, Method: Compositional matrix adjust.
Identities = 325/760 (42%), Positives = 454/760 (59%), Gaps = 42/760 (5%)
Query: 157 KKLRVWCRLEDGKWESGMI--QSTSGDEAFVL-LSNGN----VVKVSTGELLPA-NPDIL 208
K RVW + W+S + GD+ L L G + T EL P NPDIL
Sbjct: 9 KYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELPPLRNPDIL 68
Query: 209 EGVDDLIQLSYLNEPSVLNNIQYRY-SRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYR 267
G +DL LSYL+EP+VL+N++ R+ +IY+ G VL+A+NP++ +PIYG I AY
Sbjct: 69 VGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYS 128
Query: 268 QKVMDS--PHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSE 325
+ M PH++A+A+ AY +M D NQSII+SGESGAGKT +AK+AM+Y A + G +
Sbjct: 129 GQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSAS 188
Query: 326 --GIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSR 383
+E ++L +N I+E+ GNAKT+RNDNSSRFGK IEI F +I GA ++T+LLEKSR
Sbjct: 189 EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSR 248
Query: 384 VVQLAAGERSYHIFYQLCAGA--PSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFH 441
VV A ER+YHIFYQLCA A P F + L L AN ++Y Q IDG+DDA+
Sbjct: 249 VVFQAEEERNYHIFYQLCASAALPEF--KTLRLGNANYFHYTKQGGSPVIDGIDDAKEMV 306
Query: 442 NLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGC 501
N +A ++ I + F +LA +L LGN+ F D+++ + +T LMG
Sbjct: 307 NTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGV 366
Query: 502 SSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLE-V 560
+E+ L K+ ++ K ++ AI++RDALAK IY +LF+WIV+ +NK+L
Sbjct: 367 DYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHST 426
Query: 561 GKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDW 620
KQ + I +LDIYGFE+F+ NSFEQFCINYANE+LQQ FN H+FKLEQEEY + + W
Sbjct: 427 VKQHS--FIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPW 484
Query: 621 TRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKL-KQHLGSNSCFKGER- 678
T ++F DN+ C+NLIE K +GVL LLDEE PK +D T+A KL HL + F+ R
Sbjct: 485 TLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRL 543
Query: 679 -GRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLL-SSCTCQVL-QLFXXXXXXXXXX 735
+AF I+H+A +V Y GFLEKN+D + + I++L SS ++L +LF
Sbjct: 544 SNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISPT 603
Query: 736 XXXXXXXXXLD----------------TQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIK 779
L K++VG +F+ L LM L T PH++RCIK
Sbjct: 604 SATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIK 663
Query: 780 PNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQD 839
PN + P ++E +QQ R CGVLE +RIS +G+P+R +QEF RY VL+ +K + D
Sbjct: 664 PNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSD 723
Query: 840 PLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRR 879
VL++ + + YQ G TK++ R+GQ+A LE R
Sbjct: 724 RKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIR 763
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 549 bits (1415), Expect = e-156, Method: Compositional matrix adjust.
Identities = 315/796 (39%), Positives = 459/796 (57%), Gaps = 39/796 (4%)
Query: 158 KLRVWCRLEDGKWESGMIQSTSGDEAFV-LLSNGNVVKVSTGELLPANPDILEGVDDLIQ 216
K W E + S IQS+ GDE V ++++ + V ++ NP E ++D+
Sbjct: 26 KKNCWVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEKLEDMAN 85
Query: 217 LSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYR--QKVMDSP 274
++YLNE SVL N++ RY+ +IY+ +G IAVNP++ +PIY + I YR +K P
Sbjct: 86 MTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPP 145
Query: 275 HVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGG----------- 323
H++++AD AY M+ D NQS +I+GESGAGKTE K + YLA +
Sbjct: 146 HLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDK 205
Query: 324 SEG-IEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKS 382
EG +E +I+Q N +LEA+GNAKT+RN+NSSRFGK I IHF GKI GA I+T+LLEKS
Sbjct: 206 KEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKS 265
Query: 383 RVVQLAAGERSYHIFYQLCAGA-PSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFH 441
RV + ER+YHIFYQ+C+ A P L + Y+++NQ CLT+D +DD + F
Sbjct: 266 RVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDVEEFK 324
Query: 442 NLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGC 501
EA DI+ KE+++ F A++L +G + F+ E E A L G
Sbjct: 325 LCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGI 384
Query: 502 SSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVG 561
++ +L+ AL K++ G + + K + Q ++S ALAK +Y +F+W+V ++NK+L+
Sbjct: 385 NAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDT- 443
Query: 562 KQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWT 621
K I +LDI GFE F NSFEQ CINY NERLQQ FN H+F LEQEEY+ +G+ W
Sbjct: 444 KAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWE 503
Query: 622 RVEFE-DNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQ-HLGSNSCF----- 674
++F D + C++LIE KP+G+LS+L+EE FPKA D +F +KL Q H+G N F
Sbjct: 504 FIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGK 562
Query: 675 --KGERGRA-FSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLL-SSCTCQVLQLFXXXXX 730
+ +G A F + HYAG VPY G+LEKN+DP+ +++ LL +S V +LF
Sbjct: 563 PTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEE 622
Query: 731 XXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYE 790
Q++ + L KLM L +T PHF+RCI PN + PG+ +
Sbjct: 623 PAGGGKKKKGKSSAF----QTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVD 678
Query: 791 EDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSE--KQLSQDPLSISVAVL 848
+LVL Q +C GVLE +RI R G+P+R+ + EF RY +L Q D ++S +L
Sbjct: 679 AELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKIL 738
Query: 849 QQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRL-QKCFRGYQARSRFRELCN 907
+ P Y++G TK++ ++G L LE+ R + L II + Q RGY R +++L +
Sbjct: 739 AGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQD 798
Query: 908 GVITLQSFARGENTRR 923
I L R N R+
Sbjct: 799 QRIGLSVIQR--NIRK 812
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 938 EIRDEQLREIICL-QSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRK 985
E+RDE+L +II + Q+ IRG+L+RK K KL Q + V +R+ RK
Sbjct: 767 EMRDERLSKIISMFQAHIRGYLIRKAYK--KL-QDQRIGLSVIQRNIRK 812
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 549 bits (1414), Expect = e-156, Method: Compositional matrix adjust.
Identities = 315/796 (39%), Positives = 459/796 (57%), Gaps = 39/796 (4%)
Query: 158 KLRVWCRLEDGKWESGMIQSTSGDEAFV-LLSNGNVVKVSTGELLPANPDILEGVDDLIQ 216
K W E + S IQS+ GDE V ++++ + V ++ NP E ++D+
Sbjct: 27 KKNCWVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEKLEDMAN 86
Query: 217 LSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYR--QKVMDSP 274
++YLNE SVL N++ RY+ +IY+ +G IAVNP++ +PIY + I YR +K P
Sbjct: 87 MTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPP 146
Query: 275 HVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGG----------- 323
H++++AD AY M+ D NQS +I+GESGAGKTE K + YLA +
Sbjct: 147 HLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDK 206
Query: 324 SEG-IEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKS 382
EG +E +I+Q N +LEA+GNAKT+RN+NSSRFGK I IHF GKI GA I+T+LLEKS
Sbjct: 207 KEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKS 266
Query: 383 RVVQLAAGERSYHIFYQLCAGA-PSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFH 441
RV + ER+YHIFYQ+C+ A P L + Y+++NQ CLT+D +DD + F
Sbjct: 267 RVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDVEEFK 325
Query: 442 NLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGC 501
EA DI+ KE+++ F A++L +G + F+ E E A L G
Sbjct: 326 LCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGI 385
Query: 502 SSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVG 561
++ +L+ AL K++ G + + K + Q ++S ALAK +Y +F+W+V ++NK+L+
Sbjct: 386 NAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDT- 444
Query: 562 KQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWT 621
K I +LDI GFE F NSFEQ CINY NERLQQ FN H+F LEQEEY+ +G+ W
Sbjct: 445 KAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWE 504
Query: 622 RVEFE-DNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQ-HLGSNSCF----- 674
++F D + C++LIE KP+G+LS+L+EE FPKA D +F +KL Q H+G N F
Sbjct: 505 FIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGK 563
Query: 675 --KGERGRA-FSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLL-SSCTCQVLQLFXXXXX 730
+ +G A F + HYAG VPY G+LEKN+DP+ +++ LL +S V +LF
Sbjct: 564 PTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEE 623
Query: 731 XXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYE 790
Q++ + L KLM L +T PHF+RCI PN + PG+ +
Sbjct: 624 PAGGGKKKKGKSSAF----QTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVD 679
Query: 791 EDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSE--KQLSQDPLSISVAVL 848
+LVL Q +C GVLE +RI R G+P+R+ + EF RY +L Q D ++S +L
Sbjct: 680 AELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKIL 739
Query: 849 QQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRL-QKCFRGYQARSRFRELCN 907
+ P Y++G TK++ ++G L LE+ R + L II + Q RGY R +++L +
Sbjct: 740 AGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQD 799
Query: 908 GVITLQSFARGENTRR 923
I L R N R+
Sbjct: 800 QRIGLSVIQR--NIRK 813
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 938 EIRDEQLREIICL-QSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRK 985
E+RDE+L +II + Q+ IRG+L+RK K KL Q + V +R+ RK
Sbjct: 768 EMRDERLSKIISMFQAHIRGYLIRKAYK--KL-QDQRIGLSVIQRNIRK 813
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 548 bits (1413), Expect = e-156, Method: Compositional matrix adjust.
Identities = 315/796 (39%), Positives = 459/796 (57%), Gaps = 39/796 (4%)
Query: 158 KLRVWCRLEDGKWESGMIQSTSGDEAFV-LLSNGNVVKVSTGELLPANPDILEGVDDLIQ 216
K W E + S IQS+ GDE V ++++ + V ++ NP E ++D+
Sbjct: 31 KKNCWVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEKLEDMAN 90
Query: 217 LSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYR--QKVMDSP 274
++YLNE SVL N++ RY+ +IY+ +G IAVNP++ +PIY + I YR +K P
Sbjct: 91 MTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPP 150
Query: 275 HVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGG----------- 323
H++++AD AY M+ D NQS +I+GESGAGKTE K + YLA +
Sbjct: 151 HLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDK 210
Query: 324 SEG-IEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKS 382
EG +E +I+Q N +LEA+GNAKT+RN+NSSRFGK I IHF GKI GA I+T+LLEKS
Sbjct: 211 KEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKS 270
Query: 383 RVVQLAAGERSYHIFYQLCAGA-PSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFH 441
RV + ER+YHIFYQ+C+ A P L + Y+++NQ CLT+D +DD + F
Sbjct: 271 RVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDVEEFK 329
Query: 442 NLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGC 501
EA DI+ KE+++ F A++L +G + F+ E E A L G
Sbjct: 330 LCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGI 389
Query: 502 SSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVG 561
++ +L+ AL K++ G + + K + Q ++S ALAK +Y +F+W+V ++NK+L+
Sbjct: 390 NAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDT- 448
Query: 562 KQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWT 621
K I +LDI GFE F NSFEQ CINY NERLQQ FN H+F LEQEEY+ +G+ W
Sbjct: 449 KAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWE 508
Query: 622 RVEFE-DNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQ-HLGSNSCF----- 674
++F D + C++LIE KP+G+LS+L+EE FPKA D +F +KL Q H+G N F
Sbjct: 509 FIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGK 567
Query: 675 --KGERGRA-FSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLL-SSCTCQVLQLFXXXXX 730
+ +G A F + HYAG VPY G+LEKN+DP+ +++ LL +S V +LF
Sbjct: 568 PTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEE 627
Query: 731 XXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYE 790
Q++ + L KLM L +T PHF+RCI PN + PG+ +
Sbjct: 628 PAGGGKKKKGKSSAF----QTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVD 683
Query: 791 EDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSE--KQLSQDPLSISVAVL 848
+LVL Q +C GVLE +RI R G+P+R+ + EF RY +L Q D ++S +L
Sbjct: 684 AELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKIL 743
Query: 849 QQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRL-QKCFRGYQARSRFRELCN 907
+ P Y++G TK++ ++G L LE+ R + L II + Q RGY R +++L +
Sbjct: 744 AGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQD 803
Query: 908 GVITLQSFARGENTRR 923
I L R N R+
Sbjct: 804 QRIGLSVIQR--NIRK 817
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 938 EIRDEQLREIICL-QSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRK 985
E+RDE+L +II + Q+ IRG+L+RK K KL Q + V +R+ RK
Sbjct: 772 EMRDERLSKIISMFQAHIRGYLIRKAYK--KL-QDQRIGLSVIQRNIRK 817
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 548 bits (1413), Expect = e-156, Method: Compositional matrix adjust.
Identities = 315/796 (39%), Positives = 459/796 (57%), Gaps = 39/796 (4%)
Query: 158 KLRVWCRLEDGKWESGMIQSTSGDEAFV-LLSNGNVVKVSTGELLPANPDILEGVDDLIQ 216
K W E + S IQS+ GDE V ++++ + V ++ NP E ++D+
Sbjct: 31 KKNCWVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEKLEDMAN 90
Query: 217 LSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYR--QKVMDSP 274
++YLNE SVL N++ RY+ +IY+ +G IAVNP++ +PIY + I YR +K P
Sbjct: 91 MTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPP 150
Query: 275 HVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGG----------- 323
H++++AD AY M+ D NQS +I+GESGAGKTE K + YLA +
Sbjct: 151 HLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDK 210
Query: 324 SEG-IEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKS 382
EG +E +I+Q N +LEA+GNAKT+RN+NSSRFGK I IHF GKI GA I+T+LLEKS
Sbjct: 211 KEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKS 270
Query: 383 RVVQLAAGERSYHIFYQLCAGA-PSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFH 441
RV + ER+YHIFYQ+C+ A P L + Y+++NQ CLT+D +DD + F
Sbjct: 271 RVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDVEEFK 329
Query: 442 NLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGC 501
EA DI+ KE+++ F A++L +G + F+ E E A L G
Sbjct: 330 LCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGI 389
Query: 502 SSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVG 561
++ +L+ AL K++ G + + K + Q ++S ALAK +Y +F+W+V ++NK+L+
Sbjct: 390 NAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDT- 448
Query: 562 KQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWT 621
K I +LDI GFE F NSFEQ CINY NERLQQ FN H+F LEQEEY+ +G+ W
Sbjct: 449 KAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWE 508
Query: 622 RVEFE-DNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQ-HLGSNSCF----- 674
++F D + C++LIE KP+G+LS+L+EE FPKA D +F +KL Q H+G N F
Sbjct: 509 FIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGK 567
Query: 675 --KGERGRA-FSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLL-SSCTCQVLQLFXXXXX 730
+ +G A F + HYAG VPY G+LEKN+DP+ +++ LL +S V +LF
Sbjct: 568 PTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEE 627
Query: 731 XXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYE 790
Q++ + L KLM L +T PHF+RCI PN + PG+ +
Sbjct: 628 PAGGGKKKKGKSSAF----QTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVD 683
Query: 791 EDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSE--KQLSQDPLSISVAVL 848
+LVL Q +C GVLE +RI R G+P+R+ + EF RY +L Q D ++S +L
Sbjct: 684 AELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKIL 743
Query: 849 QQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRL-QKCFRGYQARSRFRELCN 907
+ P Y++G TK++ ++G L LE+ R + L II + Q RGY R +++L +
Sbjct: 744 AGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQD 803
Query: 908 GVITLQSFARGENTRR 923
I L R N R+
Sbjct: 804 QRIGLSVIQR--NIRK 817
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 938 EIRDEQLREIICL-QSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRK 985
E+RDE+L +II + Q+ IRG+L+RK K KL Q + V +R+ RK
Sbjct: 772 EMRDERLSKIISMFQAHIRGYLIRKAYK--KL-QDQRIGLSVIQRNIRK 817
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 548 bits (1412), Expect = e-156, Method: Compositional matrix adjust.
Identities = 315/796 (39%), Positives = 459/796 (57%), Gaps = 39/796 (4%)
Query: 158 KLRVWCRLEDGKWESGMIQSTSGDEAFV-LLSNGNVVKVSTGELLPANPDILEGVDDLIQ 216
K W E + S IQS+ GDE V ++++ + V ++ NP E ++D+
Sbjct: 31 KKNCWVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEKLEDMAN 90
Query: 217 LSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYR--QKVMDSP 274
++YLNE SVL N++ RY+ +IY+ +G IAVNP++ +PIY + I YR +K P
Sbjct: 91 MTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPP 150
Query: 275 HVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGG----------- 323
H++++AD AY M+ D NQS +I+GESGAGKTE K + YLA +
Sbjct: 151 HLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDK 210
Query: 324 SEG-IEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKS 382
EG +E +I+Q N +LEA+GNAKT+RN+NSSRFGK I IHF GKI GA I+T+LLEKS
Sbjct: 211 KEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKS 270
Query: 383 RVVQLAAGERSYHIFYQLCAGA-PSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFH 441
RV + ER+YHIFYQ+C+ A P L + Y+++NQ CLT+D +DD + F
Sbjct: 271 RVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDVEEFK 329
Query: 442 NLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGC 501
EA DI+ KE+++ F A++L +G + F+ E E A L G
Sbjct: 330 LCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGI 389
Query: 502 SSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVG 561
++ +L+ AL K++ G + + K + Q ++S ALAK +Y +F+W+V ++NK+L+
Sbjct: 390 NAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDT- 448
Query: 562 KQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWT 621
K I +LDI GFE F NSFEQ CINY NERLQQ FN H+F LEQEEY+ +G+ W
Sbjct: 449 KAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWE 508
Query: 622 RVEFE-DNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQ-HLGSNSCF----- 674
++F D + C++LIE KP+G+LS+L+EE FPKA D +F +KL Q H+G N F
Sbjct: 509 FIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGK 567
Query: 675 --KGERGRA-FSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLL-SSCTCQVLQLFXXXXX 730
+ +G A F + HYAG VPY G+LEKN+DP+ +++ LL +S V +LF
Sbjct: 568 PTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEE 627
Query: 731 XXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYE 790
Q++ + L KLM L +T PHF+RCI PN + PG+ +
Sbjct: 628 PAGGGKKKKGKSSAF----QTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVD 683
Query: 791 EDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSE--KQLSQDPLSISVAVL 848
+LVL Q +C GVLE +RI R G+P+R+ + EF RY +L Q D ++S +L
Sbjct: 684 AELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKIL 743
Query: 849 QQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRL-QKCFRGYQARSRFRELCN 907
+ P Y++G TK++ ++G L LE+ R + L II + Q RGY R +++L +
Sbjct: 744 AGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQD 803
Query: 908 GVITLQSFARGENTRR 923
I L R N R+
Sbjct: 804 QRIGLSVIQR--NIRK 817
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 938 EIRDEQLREIICL-QSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRK 985
E+RDE+L +II + Q+ IRG+L+RK K KL Q + V +R+ RK
Sbjct: 772 EMRDERLSKIISMFQAHIRGYLIRKAYK--KL-QDQRIGLSVIQRNIRK 817
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 541 bits (1393), Expect = e-154, Method: Compositional matrix adjust.
Identities = 309/789 (39%), Positives = 459/789 (58%), Gaps = 40/789 (5%)
Query: 163 CRLEDGK--WESGMIQSTSGDEAFV-LLSNGNVVKVSTGELLPANPDILEGVDDLIQLSY 219
C + D K + S IQS+ G+E V ++S+ + V ++ NP E ++D+ ++Y
Sbjct: 34 CWVPDPKEGFASAEIQSSKGEEITVKIVSDNSTRTVKKDDIQQMNPPKFEKLEDMANMTY 93
Query: 220 LNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYR--QKVMDSPHVY 277
LNE SVLNN++ RY+ +IY+ +G IAVNP++ +PIY + I YR +K PH++
Sbjct: 94 LNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLF 153
Query: 278 AIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSE------------ 325
++AD AY M+ D NQS +I+GESGAGKTE K + YLA + +
Sbjct: 154 SVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKTSEEEEADQK 213
Query: 326 --GIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSR 383
+E +I+Q N +LEA+GNAKT+RN+NSSRFGK I IHF GKI GA I+T+LLEKSR
Sbjct: 214 KGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSR 273
Query: 384 VVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVAND-YNYLNQSECLTIDGVDDAQNFHN 442
V + ER+YHIFYQ+C+ A L E + + + Y+++NQ CLT+D +DD + F
Sbjct: 274 VTYQQSAERNYHIFYQICSNAIPELNEVMLITPDSGLYSFINQG-CLTVDNIDDVEEFKL 332
Query: 443 LMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCS 502
EA DI+ KE++ F A++L +G + F+ E E A L G +
Sbjct: 333 CDEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGIN 392
Query: 503 SDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGK 562
+ +L+ AL K++ G + + K LQQ I+S AL+K +Y +F+W+V+++N++L+ K
Sbjct: 393 AGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLVKRVNRTLDT-K 451
Query: 563 QCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTR 622
I +LDI GFE F NSFEQ CINY NERLQQ FN H+F LEQEEY+ +G+ W
Sbjct: 452 AKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIQWEF 511
Query: 623 VEFE-DNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFAN-KLKQHLGSNSCF------ 674
++F D + C++LIE KP+G+LS+L+EE FPKA D +F + + H+G N F
Sbjct: 512 IDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDYSYQNHIGKNRMFTKPGKP 570
Query: 675 -KGERGRA-FSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLS-SCTCQVLQLFXXXXXX 731
+ +G A F + HYAG VPY G+L+KN+DP+ +++ LL+ S V +LF
Sbjct: 571 TRPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEPLVAELFRAPDEP 630
Query: 732 XXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEE 791
+ Q++ + L KLM L +T PHF+RCI PN + PG+ +
Sbjct: 631 AGGAGGKKKKKS---SAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDA 687
Query: 792 DLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSE--KQLSQDPLSISVAVLQ 849
+LVL Q +C GVLE +RI R G+P+R+ + EF RY +L Q D ++S +L
Sbjct: 688 ELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILT 747
Query: 850 QFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRL-QKCFRGYQARSRFRELCNG 908
+ P Y++G TK++ ++G L LE+ R + L II + Q RGY R +++L +
Sbjct: 748 GLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQ 807
Query: 909 VITLQSFAR 917
I L R
Sbjct: 808 RIGLSVIQR 816
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 938 EIRDEQLREIICL-QSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRK 985
E+RDE+L +II + Q+ IRG+L+RK K KL Q + V +R+ RK
Sbjct: 775 EMRDERLSKIISMFQAHIRGYLIRKAYK--KL-QDQRIGLSVIQRNIRK 820
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 540 bits (1390), Expect = e-153, Method: Compositional matrix adjust.
Identities = 306/762 (40%), Positives = 434/762 (56%), Gaps = 32/762 (4%)
Query: 173 GMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYR 232
G IQS G + V G + V ++ NP + ++D+ +++L+EP+VL N++ R
Sbjct: 47 GTIQSKEGGKVTVKTEGGETLTVKEDQVFSMNPPKYDKIEDMAMMTHLHEPAVLYNLKER 106
Query: 233 YSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGD 290
Y+ MIY+ +G + VNP+K +P+Y K + AYR K PH+++I+D AY M+ D
Sbjct: 107 YAAWMIYTYSGLFCVTVNPYKWLPVYNPKVVLAYRGKKRQEAPPHIFSISDNAYQFMLTD 166
Query: 291 GVNQSIIISGESGAGKTETAKFAMQYLAALGGGSE------------GIEYEILQTNHIL 338
NQSI+I+GESGAGKT K +QY A + E +E +I+ N +L
Sbjct: 167 RENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLL 226
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT RNDNSSRFGK I IHF A GK+ A I+T+LLEKSRV ERSYHIFY
Sbjct: 227 EAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERSYHIFY 286
Query: 399 QLCAG-APSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDR 457
Q+ + P + L DY+Y++Q E +T+ +DD + A+DI+ +++
Sbjct: 287 QIMSNKKPELIDMLLITTNPYDYHYVSQGE-ITVPSIDDQEELMATDSAIDILGFSADEK 345
Query: 458 EQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQA 517
+ + AV+ GN+ F+ E E E AA LMG +S EL+ AL +++
Sbjct: 346 TAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTEVADKAAYLMGLNSAELLKALCYPRVKV 405
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGF 577
G + + K T+ Q +S ALAK +Y +F W+V +IN+ L+ KQ I +LDI GF
Sbjct: 406 GNEFVTKGQTVSQVHNSVGALAKAVYEKMFLWMVIRINQQLDT-KQPRQYFIGVLDIAGF 464
Query: 578 ESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEF-EDNEECLNLIE 636
E F NSFEQ CIN+ NE+LQQ FN H+F LEQEEY+ +G++W ++F D C+ LIE
Sbjct: 465 EIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIE 524
Query: 637 KKPLGVLSLLDEESNFPKATDLTFANKL-KQHLGSNSCF---KGERGRA---FSIRHYAG 689
KP+G+ S+L+EE FPKATD +F NKL QHLG ++ F K +G+A FS+ HYAG
Sbjct: 525 -KPMGIFSILEEECMFPKATDTSFKNKLYDQHLGKSNNFQKPKPAKGKAEAHFSLVHYAG 583
Query: 690 EVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDTQK 749
V Y+ +G+LEKN+DPL +I L + + L L +
Sbjct: 584 TVDYNISGWLEKNKDPLNETVIGLYQKSSVKTLALLFATYGGEAEGGGGKKGGKKKGSSF 643
Query: 750 QSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRI 809
Q+V F+ L KLM L +T PHF+RCI PN + PG E +LVL Q RC GVLE +RI
Sbjct: 644 QTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRI 703
Query: 810 SRSGYPTRMRHQEFAGRYGVL----LSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKL 865
R G+P+R+ + +F RY VL + E Q D S +L +V Y+ G+TK+
Sbjct: 704 CRKGFPSRVLYADFKQRYRVLNASAIPEGQF-MDSKKASEKLLGSIDVDHTQYRFGHTKV 762
Query: 866 YLRSGQLAALEDRRKQVLQAII-RLQKCFRGYQARSRFRELC 906
+ ++G L LE+ R L II R Q RG+ R +R +
Sbjct: 763 FFKAGLLGLLEEMRDDKLAEIITRTQARCRGFLMRVEYRRMV 804
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 539 bits (1388), Expect = e-153, Method: Compositional matrix adjust.
Identities = 308/788 (39%), Positives = 458/788 (58%), Gaps = 39/788 (4%)
Query: 163 CRLEDGK--WESGMIQSTSGDEAFV-LLSNGNVVKVSTGELLPANPDILEGVDDLIQLSY 219
C + D K + S IQS+ G+E V ++S+ + V ++ NP E ++D+ ++Y
Sbjct: 34 CWVPDPKEGFASAEIQSSKGEEITVKIVSDNSTRTVKKDDIQQMNPPKFEKLEDMANMTY 93
Query: 220 LNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYR--QKVMDSPHVY 277
LNE SVLNN++ RY+ +IY+ +G IAVNP++ +PIY + I YR +K PH++
Sbjct: 94 LNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLF 153
Query: 278 AIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGG-------------S 324
++AD AY M+ D NQS +I+GESGAGKTE+ K + Y A + +
Sbjct: 154 SVADNAYQNMVTDRENQSCLITGESGAGKTESTKKVIMYFARVAANLYKQKEEPVPNLRA 213
Query: 325 EGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRV 384
+E +I++ N +LEAFGNAKT RN+NSSRFGK I IHF GKI GA I+T+LLEKSRV
Sbjct: 214 SNLEDQIIEANPVLEAFGNAKTVRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRV 273
Query: 385 VQLAAGERSYHIFYQLCAGAPSFLKERLNLKVAND-YNYLNQSECLTIDGVDDAQNFHNL 443
+ ER+YHIFYQ+C+ A L E + + + Y+++NQ CLT+D +DD + F
Sbjct: 274 TYQQSAERNYHIFYQICSNAIPELNEVMLITPDSGLYSFINQG-CLTVDNIDDVEEFKLC 332
Query: 444 MEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSS 503
EA DI+ KE++ F A++L +G + F+ E E A L G ++
Sbjct: 333 DEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINA 392
Query: 504 DELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQ 563
+L+ AL K++ G + + K LQQ I+S AL+K +Y +F+W+V+++N++L+ K
Sbjct: 393 GDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLVKRVNRTLDT-KA 451
Query: 564 CTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRV 623
I +LDI GFE F NSFEQ CINY NERLQQ FN H+F LEQEEY+ +G+ W +
Sbjct: 452 KRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIQWEFI 511
Query: 624 EFE-DNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFAN-KLKQHLGSNSCF------- 674
+F D + C++LIE KP+G+LS+L+EE FPKA D +F + + H+G N F
Sbjct: 512 DFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDYSYQNHIGKNRMFTKPGKPT 570
Query: 675 KGERGRA-FSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLS-SCTCQVLQLFXXXXXXX 732
+ +G A F + HYAG VPY G+L+KN+DP+ +++ LL+ S V +LF
Sbjct: 571 RPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEPLVAELFRAPDEPA 630
Query: 733 XXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEED 792
+ Q++ + L KLM L T PHF+RCI PN ++ PG+ + +
Sbjct: 631 GGAGGKKKKKS---SAFQTISAVHRESLNKLMCNLRRTNPHFVRCIIPNLEKDPGLVDAE 687
Query: 793 LVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSE--KQLSQDPLSISVAVLQQ 850
LVL Q +C GVLE +RI R G+P+R+ + EF RY +L Q D ++S +L
Sbjct: 688 LVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILTG 747
Query: 851 FNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRL-QKCFRGYQARSRFRELCNGV 909
+ P Y++G TK++ ++G L LE+ R + L II + Q RGY R +++L +
Sbjct: 748 LQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQR 807
Query: 910 ITLQSFAR 917
I L R
Sbjct: 808 IGLSVIQR 815
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 938 EIRDEQLREIICL-QSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRK 985
E+RDE+L +II + Q+ IRG+L+RK K KL Q + V +R+ RK
Sbjct: 774 EMRDERLSKIISMFQAHIRGYLIRKAYK--KL-QDQRIGLSVIQRNIRK 819
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 538 bits (1385), Expect = e-153, Method: Compositional matrix adjust.
Identities = 300/668 (44%), Positives = 417/668 (62%), Gaps = 35/668 (5%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 42 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 101
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 102 FHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 161
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 162 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 221
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F++ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 222 EAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 281
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 282 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 341
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 342 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 399
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V++IN L C R I +LDI
Sbjct: 400 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL-----CQERKAYFIGVLDI 454
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
YGFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 455 YGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 514
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 515 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 573
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 574 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 627
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 628 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 684
Query: 808 RISRSGYP 815
RI+R G+P
Sbjct: 685 RITRKGFP 692
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 536 bits (1381), Expect = e-152, Method: Compositional matrix adjust.
Identities = 300/671 (44%), Positives = 417/671 (62%), Gaps = 35/671 (5%)
Query: 166 EDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSV 225
E +E G I S + D +G +V + NP +GV+D+ +LSYLNEP+V
Sbjct: 42 ERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFDGVEDMSELSYLNEPAV 101
Query: 226 LNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY--RQKVMDSPHVYAIADTA 283
+N++ RY++D+IY+ +G L+AVNPFK +PIY + + + R++ +PH++AI+D A
Sbjct: 102 FHNLRVRYNQDLIYTYSGLFLVAVNPFKIIPIYTQEMVDIFKGRRRNEVAPHIFAISDVA 161
Query: 284 YNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGG-----GSEGIEYEILQTNHIL 338
Y M+ D NQS++I+GESGAGKTE K +QYLA++ G GS +E +ILQ N IL
Sbjct: 162 YRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPIL 221
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNAKT+RN+NSSRFGK IEI F++ G I GA IQ++LLEKSRVV + ER+YHIFY
Sbjct: 222 EAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFY 281
Query: 399 QLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDRE 458
QL AGA + K+ L+L +NYLNQS C+ I GV D++ F +A+DIV +E++
Sbjct: 282 QLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQM 341
Query: 459 QTFAMLAAVLWLGNISFQVIDNENHVEVIADE-AVTTAAMLMGCSSDELMLALSTHKIQA 517
F ++A +L LGNI F+ E V+ D+ A+ A+ + G + L AL +I A
Sbjct: 342 SIFKIIAGILHLGNIKFEKGAGEG--AVLKDKTALNAASTVFGVNPSVLEKALMEPRILA 399
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRS---INILDI 574
G+D +A+ L ++++ SRDAL K +YG LF W+V +IN L C R I +LDI
Sbjct: 400 GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVL-----CQERKAYFIGVLDI 454
Query: 575 YGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLN 633
GFE FK NSFEQ CINY NE+LQQ FN H+FKLEQEEY + ++WT ++F D++ ++
Sbjct: 455 SGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 514
Query: 634 LIE-KKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYA 688
LI+ ++P G+L+LLDE+S FP ATD T KL H + K E R F + HYA
Sbjct: 515 LIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNA-KYEEPRFSKTEFGVTHYA 573
Query: 689 GEVPYDTNGFLEKNRDPLQTDI-IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDT 747
G+V Y+ +LEKN+DPLQ D+ + S V +LF
Sbjct: 574 GQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFI------ 627
Query: 748 QKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIV 807
+V ++K QL LM LE T PHF+RCI PN+KQLP E+ +VL Q RC GVLE +
Sbjct: 628 ---TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGI 684
Query: 808 RISRSGYPTRM 818
RI+R G+P R+
Sbjct: 685 RITRKGFPNRI 695
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 533 bits (1374), Expect = e-151, Method: Compositional matrix adjust.
Identities = 347/948 (36%), Positives = 509/948 (53%), Gaps = 102/948 (10%)
Query: 157 KKLRVWCRLEDGKWESGMIQSTSGDEAFV-LLSNGNVVKVSTGELLPANPDILEGVDDLI 215
KKL VW E +E+ I+ GDE V L NG V +S ++ NP V+D+
Sbjct: 31 KKL-VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNPPKFSKVEDMA 89
Query: 216 QLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDS-- 273
+L+ LNE SVL+N++ RY +IY+ +G + +NP+K +PIY K I Y+ K
Sbjct: 90 ELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMP 149
Query: 274 PHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEG------- 326
PH+YAIADTAY M+ D +QSI+ +GESGAGKTE K +QYLA + +G
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 327 ---------IEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTF 377
+E ++LQ N ILEAFGNAKT +NDNSSRFGK I I+F G I GA I+T+
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 378 LLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDA 437
LLEKSR ++ A ER++HIFY L AGA ++ L L+ N+Y +L+ + I D
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGH-VPIPAQQDD 328
Query: 438 QNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAM 497
+ F +EA+ I+ +E++ ++++VL LGNI F+ N + + + A
Sbjct: 329 EMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCH 388
Query: 498 LMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKS 557
LMG + + ++ T +I+ G+D + K T +QA + +ALAK + LF WI+ ++NK+
Sbjct: 389 LMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKA 448
Query: 558 LEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDG 617
L+ K+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LEQEEY+ +G
Sbjct: 449 LDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREG 508
Query: 618 VDWTRVEFE-DNEECLNLIEK--KPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCF 674
++W ++F D + C+ LIE+ P GVL+LLDEE FPKATD +F KL Q G+++ F
Sbjct: 509 IEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKF 568
Query: 675 KGER----GRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQ-VLQLFXXXX 729
+ + F I HYAG+V Y+ + +L KN DPL ++ LL+ + + V L+
Sbjct: 569 QKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVD 628
Query: 730 XXXXXXXXXXXXXXXL----DTQK---QSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNS 782
L T+K ++VG +K QL KLM L NT P+F+RCI PN
Sbjct: 629 RIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNH 688
Query: 783 KQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEK--QLSQDP 840
++ G + LVL+Q RC GVLE +RI R G+P R+ QEF RY +L + + D
Sbjct: 689 EKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDG 748
Query: 841 LSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRK-QVLQAIIRLQKCFRGYQAR 899
+ +++ + P +Y++G +K++ R+G LA LE+ R ++ II Q RGY AR
Sbjct: 749 KQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLAR 808
Query: 900 SRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPEIRDEQLREIICLQSAIRGWL- 958
++FA+ R +QL I C+Q +R ++
Sbjct: 809 -------------KAFAK----------------------RQQQLESIFCIQYNVRSFMN 833
Query: 959 VRKQLKMHKLKQSNPVNAKVKRRSGRKSSDMKDVPQEQVQALPTALAELQRRVLKAEATL 1018
V M P+ KV R+ +E++QA L + R KAEA L
Sbjct: 834 VXHWPWMXLFFXIXPL-LKVTRQ------------EEEMQAKDEELQRTKERQQKAEAEL 880
Query: 1019 GQKE-------EENAALREQLQQYDAKWLEYE-------AKMKSMEEM 1052
+ E EE L+E+LQ + E E AK + +EE+
Sbjct: 881 KELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRVRLAAKKQELEEI 928
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 530 bits (1366), Expect = e-150, Method: Compositional matrix adjust.
Identities = 310/783 (39%), Positives = 451/783 (57%), Gaps = 39/783 (4%)
Query: 157 KKLRVWCRLEDGKWESGMIQSTSGDEAFV-LLSNGNVVKVSTGELLPANPDILEGVDDLI 215
KKL VW E +E+ I+ GDE V L NG V +S ++ NP V+D+
Sbjct: 31 KKL-VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNPPKFSKVEDMA 89
Query: 216 QLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDS-- 273
+L+ LNE SVL+N++ RY +IY+ +G + +NP+K +PIY K I Y+ K
Sbjct: 90 ELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMP 149
Query: 274 PHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEG------- 326
PH+YAIADTAY M+ D +QSI+ +GESGAGKTE K +QYLA + +G
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 327 ---------IEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTF 377
+E ++LQ N ILEAFGNAKT +NDNSSRFGK I I+F G I GA I+T+
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 378 LLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDA 437
LLEKSR ++ A ER++HIFY L AGA ++ L L+ N+Y +L+ + I D
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGH-VPIPAQQDD 328
Query: 438 QNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAM 497
+ F +EA+ I+ +E++ ++++VL LGNI F+ N + + + A
Sbjct: 329 EMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCH 388
Query: 498 LMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKS 557
LMG + + ++ T +I+ G+D + K T +QA + +ALAK + LF WI+ ++NK+
Sbjct: 389 LMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKA 448
Query: 558 LEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDG 617
L+ K+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LEQEEY+ +G
Sbjct: 449 LDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREG 508
Query: 618 VDWTRVEFE-DNEECLNLIEK--KPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCF 674
++W ++F D + C+ LIE+ P GVL+LLDEE FPKATD +F KL Q G+++ F
Sbjct: 509 IEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKF 568
Query: 675 KGER----GRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQ-VLQLFXXXX 729
+ + F I HYAG+V Y+ + +L KN DPL ++ LL+ + + V L+
Sbjct: 569 QKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVD 628
Query: 730 XXXXXXXXXXXXXXXL----DTQK---QSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNS 782
L T+K ++VG +K QL KLM L NT P+F+RCI PN
Sbjct: 629 RIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNH 688
Query: 783 KQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEK--QLSQDP 840
++ G + LVL+Q RC GVLE +RI R G+P R+ QEF RY +L + + D
Sbjct: 689 EKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDG 748
Query: 841 LSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRK-QVLQAIIRLQKCFRGYQAR 899
+ +++ + P +Y++G +K++ R+G LA LE+ R ++ II Q RGY AR
Sbjct: 749 KQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLAR 808
Query: 900 SRF 902
F
Sbjct: 809 KAF 811
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 530 bits (1365), Expect = e-150, Method: Compositional matrix adjust.
Identities = 310/783 (39%), Positives = 451/783 (57%), Gaps = 39/783 (4%)
Query: 157 KKLRVWCRLEDGKWESGMIQSTSGDEAFV-LLSNGNVVKVSTGELLPANPDILEGVDDLI 215
KKL VW E +E+ I+ GDE V L NG V +S ++ NP V+D+
Sbjct: 31 KKL-VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNPPKFSKVEDMA 89
Query: 216 QLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDS-- 273
+L+ LNE SVL+N++ RY +IY+ +G + +NP+K +PIY K I Y+ K
Sbjct: 90 ELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMP 149
Query: 274 PHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEG------- 326
PH+YAIADTAY M+ D +QSI+ +GESGAGKTE K +QYLA + +G
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 327 ---------IEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTF 377
+E ++LQ N ILEAFGNAKT +NDNSSRFGK I I+F G I GA I+T+
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 378 LLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDA 437
LLEKSR ++ A ER++HIFY L AGA ++ L L+ N+Y +L+ + I D
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGH-VPIPAQQDD 328
Query: 438 QNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAM 497
+ F +EA+ I+ +E++ ++++VL LGNI F+ N + + + A
Sbjct: 329 EMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCH 388
Query: 498 LMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKS 557
LMG + + ++ T +I+ G+D + K T +QA + +ALAK + LF WI+ ++NK+
Sbjct: 389 LMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKA 448
Query: 558 LEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDG 617
L+ K+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LEQEEY+ +G
Sbjct: 449 LDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREG 508
Query: 618 VDWTRVEFE-DNEECLNLIEK--KPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCF 674
++W ++F D + C+ LIE+ P GVL+LLDEE FPKATD +F KL Q G+++ F
Sbjct: 509 IEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKF 568
Query: 675 KGER----GRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQ-VLQLFXXXX 729
+ + F I HYAG+V Y+ + +L KN DPL ++ LL+ + + V L+
Sbjct: 569 QKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVD 628
Query: 730 XXXXXXXXXXXXXXXL----DTQK---QSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNS 782
L T+K ++VG +K QL KLM L NT P+F+RCI PN
Sbjct: 629 RIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNH 688
Query: 783 KQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEK--QLSQDP 840
++ G + LVL+Q RC GVLE +RI R G+P R+ QEF RY +L + + D
Sbjct: 689 EKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDG 748
Query: 841 LSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRK-QVLQAIIRLQKCFRGYQAR 899
+ +++ + P +Y++G +K++ R+G LA LE+ R ++ II Q RGY AR
Sbjct: 749 KQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLAR 808
Query: 900 SRF 902
F
Sbjct: 809 KAF 811
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 529 bits (1362), Expect = e-150, Method: Compositional matrix adjust.
Identities = 308/783 (39%), Positives = 449/783 (57%), Gaps = 39/783 (4%)
Query: 157 KKLRVWCRLEDGKWESGMIQSTSGDEAFV-LLSNGNVVKVSTGELLPANPDILEGVDDLI 215
KKL VW E +E+ I+ GDE V L NG V +S ++ NP V+D+
Sbjct: 31 KKL-VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNPPKFSKVEDMA 89
Query: 216 QLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDS-- 273
+L+ LNE SVL+N++ RY +IY+ +G + +NP+K +PIY K I Y+ K
Sbjct: 90 ELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMP 149
Query: 274 PHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEG------- 326
PH+YAIADTAY M+ D +QSI+ +GESGAGKTE K +QYLA + +G
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 327 ---------IEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTF 377
+E ++LQ N ILEAFGNAKT +NDNSSRFGK I I+F G I GA I+T+
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 378 LLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDA 437
LLEKSR ++ A ER++HIFY L AGA ++ L L+ N+Y +L+ + I D
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGH-VPIPAQQDD 328
Query: 438 QNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAM 497
+ F +EA+ I+ +E++ ++++VL LGNI F+ N + + + A
Sbjct: 329 EMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCH 388
Query: 498 LMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKS 557
LMG + + ++ T +I+ G+D + K T +QA + +ALAK + LF WI+ ++NK+
Sbjct: 389 LMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKA 448
Query: 558 LEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDG 617
L+ K+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LEQEEY+ +G
Sbjct: 449 LDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREG 508
Query: 618 VDWTRVEFE-DNEECLNLIEK--KPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCF 674
++W ++F D + C+ LIE+ P GVL+LLDEE FPKATD +F KL Q G+++ F
Sbjct: 509 IEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKF 568
Query: 675 KGER----GRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQ-VLQLFXXXX 729
+ + F I HYAG+V Y+ + +L KN DPL ++ LL+ + + V L+
Sbjct: 569 QKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVD 628
Query: 730 XXXXXXXXXXXXXXXLDTQKQ-------SVGTKFKGQLFKLMHQLENTRPHFIRCIKPNS 782
L + + +VG +K QL KLM L NT P+F+RCI PN
Sbjct: 629 RIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNH 688
Query: 783 KQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSE--KQLSQDP 840
++ G + LVL+Q RC GVLE +RI R G+P R+ QEF RY +L + + D
Sbjct: 689 EKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDG 748
Query: 841 LSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRK-QVLQAIIRLQKCFRGYQAR 899
+ +++ + P +Y++G +K++ R+G LA LE+ R ++ II Q RGY AR
Sbjct: 749 KQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLAR 808
Query: 900 SRF 902
F
Sbjct: 809 KAF 811
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 527 bits (1358), Expect = e-149, Method: Compositional matrix adjust.
Identities = 308/783 (39%), Positives = 449/783 (57%), Gaps = 39/783 (4%)
Query: 157 KKLRVWCRLEDGKWESGMIQSTSGDEAFV-LLSNGNVVKVSTGELLPANPDILEGVDDLI 215
KKL VW E +E+ I+ GDE V L NG V +S ++ NP V+D+
Sbjct: 31 KKL-VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNPPKFSKVEDMA 89
Query: 216 QLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDS-- 273
+L+ LNE SVL+N++ RY +IY+ +G + +NP+K +PIY K I Y+ K
Sbjct: 90 ELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMP 149
Query: 274 PHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEG------- 326
PH+YAIADTAY M+ D +QSI+ +GESGAGKTE K +QYLA + +G
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 327 ---------IEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTF 377
+E ++LQ N ILEAFGNAKT +NDNSSRFGK I I+F G I GA I+T+
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 378 LLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDA 437
LLEKSR ++ A ER++HIFY L AGA ++ L L+ N+Y +L+ + I D
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGH-VPIPAQQDD 328
Query: 438 QNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAM 497
+ F +EA+ I+ +E++ ++++VL LGNI F+ N + + + A
Sbjct: 329 EMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCH 388
Query: 498 LMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKS 557
LMG + + ++ T +I+ G+D + K T +QA + +ALAK + LF WI+ ++NK+
Sbjct: 389 LMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKA 448
Query: 558 LEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDG 617
L+ K+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LEQEEY+ +G
Sbjct: 449 LDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREG 508
Query: 618 VDWTRVEFE-DNEECLNLIEK--KPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCF 674
++W ++F D + C+ LIE+ P GVL+LLDEE FPKATD +F KL Q G+++ F
Sbjct: 509 IEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKF 568
Query: 675 KGER----GRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQ-VLQLFXXXX 729
+ + F I HYAG+V Y+ + +L KN DPL ++ LL+ + + V L+
Sbjct: 569 QKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVD 628
Query: 730 XXXXXXXXXXXXXXXLDTQKQ-------SVGTKFKGQLFKLMHQLENTRPHFIRCIKPNS 782
L + + +VG +K QL KLM L NT P+F+RCI PN
Sbjct: 629 RIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNH 688
Query: 783 KQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSE--KQLSQDP 840
++ G + LVL+Q RC GVLE +RI R G+P R+ QEF RY +L + + D
Sbjct: 689 EKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDG 748
Query: 841 LSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRK-QVLQAIIRLQKCFRGYQAR 899
+ +++ + P +Y++G +K++ R+G LA LE+ R ++ II Q RGY AR
Sbjct: 749 KQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYLAR 808
Query: 900 SRF 902
F
Sbjct: 809 KAF 811
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 516 bits (1328), Expect = e-146, Method: Compositional matrix adjust.
Identities = 299/759 (39%), Positives = 438/759 (57%), Gaps = 38/759 (5%)
Query: 157 KKLRVWCRLEDGKWESGMIQSTSGDEAFV-LLSNGNVVKVSTGELLPANPDILEGVDDLI 215
KKL VW E +E+ I+ GDE V L NG V +S ++ NP V+D+
Sbjct: 31 KKL-VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNPPKFSKVEDMA 89
Query: 216 QLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDS-- 273
+L+ LNE SVL+N++ RY +IY+ +G + +NP+K +PIY K I Y+ K
Sbjct: 90 ELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMP 149
Query: 274 PHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEG------- 326
PH+YAIADTAY M+ D +QSI+ +GESGAGKTE K +QYLA + +G
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 327 ---------IEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTF 377
+E ++LQ N ILEAFGNAKT +NDNSSRFGK I I+F G I GA I+T+
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 378 LLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDA 437
LLEKSR ++ A ER++HIFY L AGA ++ L L+ N+Y +L+ + I D
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGH-VPIPAQQDD 328
Query: 438 QNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAM 497
+ F +EA+ I+ +E++ ++++VL LGNI F+ N + + + A
Sbjct: 329 EMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCH 388
Query: 498 LMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKS 557
LMG + + ++ T +I+ G+D + K T +QA + +ALAK + LF WI+ ++NK+
Sbjct: 389 LMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKA 448
Query: 558 LEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDG 617
L+ K+ + ILDI GFE F+ NSFEQ CINY NE+LQQ FN +F LEQEEY+ +G
Sbjct: 449 LDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREG 508
Query: 618 VDWTRVEFE-DNEECLNLIEK--KPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCF 674
++W ++F D + C+ LIE+ P GVL+LLDEE FPKATD +F KL Q G+++ F
Sbjct: 509 IEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKF 568
Query: 675 KGER----GRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQ-VLQLFXXXX 729
+ + F I HYAG+V Y+ + +L KN DPL ++ LL+ + + V L+
Sbjct: 569 QKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVD 628
Query: 730 XXXXXXXXXXXXXXXLDTQKQ-------SVGTKFKGQLFKLMHQLENTRPHFIRCIKPNS 782
L + + +VG +K QL KLM L NT P+F+RCI PN
Sbjct: 629 RIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNH 688
Query: 783 KQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSE--KQLSQDP 840
++ G + LVL+Q RC GVLE +RI R G+P R+ QEF RY +L + + D
Sbjct: 689 EKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDG 748
Query: 841 LSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRR 879
+ +++ + P +Y++G +K++ R+G LA LE+ R
Sbjct: 749 KQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEER 787
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 514 bits (1323), Expect = e-145, Method: Compositional matrix adjust.
Identities = 284/735 (38%), Positives = 418/735 (56%), Gaps = 30/735 (4%)
Query: 175 IQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYS 234
I S G + G V V +++ NP + ++D+ L++L+EP+VL N++ RY
Sbjct: 51 IVSREGGKVTAETEYGKTVTVKEDQVMQQNPPKFDKIEDMAMLTFLHEPAVLYNLKDRYG 110
Query: 235 RDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGDGV 292
MIY+ +G + VNP+K +P+Y + + AYR K PH+++I+D AY M+ D
Sbjct: 111 SWMIYTYSGLFCVTVNPYKWLPVYTPEVVAAYRGKKRSEAPPHIFSISDNAYQYMLTDRE 170
Query: 293 NQSIIISGESGAGKTETAKFAMQYLAALGG-----------GSEGIEYEILQTNHILEAF 341
NQSI+I+GESGAGKT K +QY A + G +E +I+Q N LEAF
Sbjct: 171 NQSILITGESGAGKTVNTKRVIQYFAVIAAIGDRSKKDQSPGKGTLEDQIIQANPALEAF 230
Query: 342 GNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLC 401
GNAKT RNDNSSRFGK I IHF A GK+ A I+T+LLEKSRV+ ER YHIFYQ+
Sbjct: 231 GNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVIFQLKAERDYHIFYQIL 290
Query: 402 AGA-PSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQT 460
+ P L L DY +++Q E T+ +DDA+ A D++ E++
Sbjct: 291 SNKKPELLDMLLITNNPYDYAFISQGET-TVASIDDAEELMATDNAFDVLGFTSEEKNSM 349
Query: 461 FAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKD 520
+ + A++ GN+ F++ E E E +A LMG +S +L+ L +++ G +
Sbjct: 350 YKLTGAIMHFGNMKFKLKQREEQAEPDGTEEADKSAYLMGLNSADLLKGLCHPRVKVGNE 409
Query: 521 SIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESF 580
+ K +QQ I + ALAK +Y +F+W+V +IN +LE KQ I +LDI GFE F
Sbjct: 410 YVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLET-KQPRQYFIGVLDIAGFEIF 468
Query: 581 KKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLNLIEKKP 639
NSFEQ CIN+ NE+LQQ FN H+F LEQEEY+ +G++WT ++F D + C++LIE KP
Sbjct: 469 DFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQACIDLIE-KP 527
Query: 640 LGVLSLLDEESNFPKATDLTFANKL-KQHLGSNSCF------KGERGRAFSIRHYAGEVP 692
+G++S+L+EE FPKATD+TF KL HLG ++ F KG+ FS+ HYAG V
Sbjct: 528 MGIMSILEEECMFPKATDMTFKAKLFDNHLGKSANFQKPRNIKGKPEAHFSLIHYAGIVD 587
Query: 693 YDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDTQKQSV 752
Y+ G+L+KN+DPL ++ L + ++L + Q+V
Sbjct: 588 YNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFANYAGADAPIEKGKGKAKKGSSFQTV 647
Query: 753 GTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRS 812
+ L KLM L +T PHF+RCI PN + PG+ + LV+ Q RC GVLE +RI R
Sbjct: 648 SALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRICRK 707
Query: 813 GYPTRMRHQEFAGRYGVL----LSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLR 868
G+P R+ + +F RY +L + E Q D + +L ++ Y+ G+TK++ +
Sbjct: 708 GFPNRILYGDFRQRYRILNPAAIPEGQFI-DSRKGAEKLLSSLDIDHNQYKFGHTKVFFK 766
Query: 869 SGQLAALEDRRKQVL 883
+G L LE+ R + L
Sbjct: 767 AGLLGLLEEMRDERL 781
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 501 bits (1289), Expect = e-141, Method: Compositional matrix adjust.
Identities = 302/800 (37%), Positives = 440/800 (55%), Gaps = 45/800 (5%)
Query: 158 KLRVWCRLEDGKWESGMIQSTSGDEAFVLLSNGNVVKV-STGELLPANPDILEGVDDLIQ 216
K W D + IQST GDE V +V ++ NP E D+
Sbjct: 31 KKNCWVPDPDFGFVGAEIQSTKGDEVTVKTDKTQETRVVKKDDIGQRNPPKFEMNMDMAN 90
Query: 217 LSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQK--VMDSP 274
L++LNE S+L+N++ RY IY+ +G IA+NP++ +PIY + YR K P
Sbjct: 91 LTFLNEASILHNLRSRYESGFIYTYSGLFCIAINPYRRLPIYTQGLVDKYRGKRRAEMPP 150
Query: 275 HVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEG-------- 326
H+++IAD AY M+ D NQS++I+GESGAGKTE K +QY A + G
Sbjct: 151 HLFSIADNAYQYMLQDRENQSMLITGESGAGKTENTKKVIQYFALVAASLAGKKDKKEEE 210
Query: 327 ---------IEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTF 377
+E +I+Q N +LEA+GNAKT+RN+NSSRFGK I IHF GKI GA I+T+
Sbjct: 211 KKKDEKKGTLEDQIVQCNPVLEAYGNAKTTRNNNSSRFGKFIRIHFGTQGKIAGADIETY 270
Query: 378 LLEKSRVVQLAAGERSYHIFYQLCAGA-PSFLKERLNLKVANDYNYLNQSECLTIDGVDD 436
LLEKSRV + ER+YHIFYQL + A P +++ L + Y ++NQ LT+DG+DD
Sbjct: 271 LLEKSRVTYQQSAERNYHIFYQLLSPAFPENIEKILAVPDPGLYGFINQG-TLTVDGIDD 329
Query: 437 AQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAA 496
+ A D++ E++ + +L LG + ++ + + A+ A
Sbjct: 330 EEEMGLTDTAFDVLGFTDEEKLSMYKCTGCILHLGEMKWKQRGEQAEADGTAE--AEKVA 387
Query: 497 MLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINK 556
L+G ++ +L+ L KI+ G + + + Q +S ALAK +Y +F+W+V ++N+
Sbjct: 388 FLLGVNAGDLLKCLLKPKIKVGTEYVTQGRNKDQVTNSIAALAKSLYDRMFNWLVRRVNQ 447
Query: 557 SLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELD 616
+L+ K I +LDI GFE F NSFEQ CINY NERLQQ FN H+F LEQEEY+ +
Sbjct: 448 TLDT-KAKRQFFIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKE 506
Query: 617 GVDWTRVEFE-DNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKL-KQHLGSNSCF 674
G+ W ++F D + C+ LIE KP+G+LS+L+EE FPKA+D +F NKL HLG N F
Sbjct: 507 GIVWEFIDFGLDLQACIELIE-KPMGILSILEEECMFPKASDTSFKNKLYDNHLGKNPMF 565
Query: 675 -KGERGRA------FSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQ-LFX 726
K + +A F + HYAG V Y G+L+KN+DP+ ++++LL + +++ LF
Sbjct: 566 GKPKPPKAGCAEAHFCLHHYAGSVSYSIAGWLDKNKDPINENVVELLQNSKEPIVKMLFT 625
Query: 727 XXXXXXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLP 786
Q++ + K L KLM L +T PHF+RCI PN + P
Sbjct: 626 PPRILTPGGKKKKGKSAAF----QTISSVHKESLNKLMKNLYSTHPHFVRCIIPNELKTP 681
Query: 787 GIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLS--QDPLSIS 844
G+ + LVL Q RC GVLE +RI R G+P R+ + EF RY +L S D ++
Sbjct: 682 GLIDAALVLHQLRCNGVLEGIRICRKGFPNRIIYSEFKQRYSILAPNAVPSGFADGKVVT 741
Query: 845 VAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRL-QKCFRGYQARSRFR 903
L + P Y++G TK++ ++G L LED R + L II + Q RGY R ++
Sbjct: 742 DKALSALQLDPNEYRLGNTKVFFKAGVLGMLEDMRDERLSKIISMFQAHIRGYLMRKAYK 801
Query: 904 ELCNGVITLQSFARGENTRR 923
+L + I L R N R+
Sbjct: 802 KLQDQRIGLTLIQR--NVRK 819
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 497 bits (1279), Expect = e-140, Method: Compositional matrix adjust.
Identities = 289/763 (37%), Positives = 410/763 (53%), Gaps = 34/763 (4%)
Query: 173 GMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYR 232
G IQS G V G + V ++ NP + ++D+ +++L+EP+VL N+ R
Sbjct: 50 GTIQSXEGGXVTVXTEGGETLTVKEDQVFSMNPPXYDXIEDMAMMTHLHEPAVLYNLXER 109
Query: 233 YSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGD 290
Y+ MIY+ +G + VNP+ +P+Y + AYR K PH+++I+D AY M+ D
Sbjct: 110 YAAWMIYTYSGLFCVTVNPYXWLPVYNPXVVLAYRGKKRQEAPPHIFSISDNAYQFMLTD 169
Query: 291 GVNQSIIISGESGAGKTETAKFAMQYLAALGGGSE------------GIEYEILQTNHIL 338
NQSI+I+GESGAGKT +QY A + E +E +I+ N +L
Sbjct: 170 RENQSILITGESGAGKTVNTXRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLL 229
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNA T RNDNSSRFG I IHF A GK+ A I+T+LLE SRV ERSYHIFY
Sbjct: 230 EAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYLLEXSRVTFQLPAERSYHIFY 289
Query: 399 QLCAG-APSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDR 457
Q+ + P + L DY+Y+++ E +T+ +DD + A+DI+ ++
Sbjct: 290 QIMSNXXPELIDMLLITTNPYDYHYVSEGE-ITVPSIDDQEELMATDSAIDILGFSADEX 348
Query: 458 EQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQA 517
+ + AV+ GN+ F E E E AA LMG +S EL+ AL ++
Sbjct: 349 TAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVADXAAYLMGLNSAELLKALCYPRVGV 408
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGF 577
G +++ T+ + +S ALA +Y +F W+V +IN+ L+ KQ I +LDI GF
Sbjct: 409 GNEAVTXGETVSEVHNSVGALAXAVYEXMFLWMVIRINQQLDT-KQPRQYFIGVLDIAGF 467
Query: 578 ESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEF-EDNEECLNLIE 636
E F NSFEQ CIN+ NE LQQ FN H+F LEQEEY +G++W ++F D C+ LIE
Sbjct: 468 EIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIEWEFIDFGMDLAACIELIE 527
Query: 637 KKPLGVLSLLDEESNFPKATDLTFANKL-KQHLGSNSCF---KGERGRA---FSIRHYAG 689
P+G+ S+L+EE FPKATD +F N L +HLG ++ F K +G+A FS+ HYAG
Sbjct: 528 -XPMGIFSILEEECMFPKATDTSFXNXLYDEHLGKSNNFQKPKPAKGKAEAHFSLVHYAG 586
Query: 690 EVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDTQK 749
V Y+ +G+LE N DPL +I L + L L +
Sbjct: 587 TVDYNISGWLEXNXDPLNETVIGLYQXSSVXTLALLFATYGGEAEGGGGKKGGKKKGSSF 646
Query: 750 QSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRI 809
Q+V F+ L LM L +T PHF+RCI PN PG E +LVL Q RC GVLE +RI
Sbjct: 647 QTVSALFRENLNXLMANLRSTHPHFVRCIIPNETXTPGAMEHELVLHQLRCNGVLEGIRI 706
Query: 810 SRSGYPTRMRHQEFAGRYGVL----LSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKL 865
R G+P+R+ + +F RY VL + E Q D S +L +V Y G+T +
Sbjct: 707 CRKGFPSRVLYADFKQRYRVLNASAIPEGQF-MDSKKASEKLLGGGDVDHTQYAFGHTXV 765
Query: 866 YLRSGQLAALEDRRKQVLQAIIRLQ--KCFRGYQARSRFRELC 906
+ +G L LE+ R L II +C RG+ R +R +
Sbjct: 766 FFXAGLLGLLEEMRDDXLAEIITATQARC-RGFLMRVEYRAMV 807
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 497 bits (1279), Expect = e-140, Method: Compositional matrix adjust.
Identities = 289/763 (37%), Positives = 410/763 (53%), Gaps = 34/763 (4%)
Query: 173 GMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYR 232
G IQS G V G + V ++ NP + ++D+ +++L+EP+VL N+ R
Sbjct: 47 GTIQSXEGGXVTVXTEGGETLTVKEDQVFSMNPPXYDXIEDMAMMTHLHEPAVLYNLXER 106
Query: 233 YSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGD 290
Y+ MIY+ +G + VNP+ +P+Y + AYR K PH+++I+D AY M+ D
Sbjct: 107 YAAWMIYTYSGLFCVTVNPYXWLPVYNPXVVLAYRGKKRQEAPPHIFSISDNAYQFMLTD 166
Query: 291 GVNQSIIISGESGAGKTETAKFAMQYLAALGGGSE------------GIEYEILQTNHIL 338
NQSI+I+GESGAGKT +QY A + E +E +I+ N +L
Sbjct: 167 RENQSILITGESGAGKTVNTXRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLL 226
Query: 339 EAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFY 398
EAFGNA T RNDNSSRFG I IHF A GK+ A I+T+LLE SRV ERSYHIFY
Sbjct: 227 EAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYLLEXSRVTFQLPAERSYHIFY 286
Query: 399 QLCAG-APSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDR 457
Q+ + P + L DY+Y+++ E +T+ +DD + A+DI+ ++
Sbjct: 287 QIMSNXXPELIDMLLITTNPYDYHYVSEGE-ITVPSIDDQEELMATDSAIDILGFSADEX 345
Query: 458 EQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQA 517
+ + AV+ GN+ F E E E AA LMG +S EL+ AL ++
Sbjct: 346 TAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVADXAAYLMGLNSAELLKALCYPRVGV 405
Query: 518 GKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGF 577
G +++ T+ + +S ALA +Y +F W+V +IN+ L+ KQ I +LDI GF
Sbjct: 406 GNEAVTXGETVSEVHNSVGALAXAVYEXMFLWMVIRINQQLDT-KQPRQYFIGVLDIAGF 464
Query: 578 ESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEF-EDNEECLNLIE 636
E F NSFEQ CIN+ NE LQQ FN H+F LEQEEY +G++W ++F D C+ LIE
Sbjct: 465 EIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIEWEFIDFGMDLAACIELIE 524
Query: 637 KKPLGVLSLLDEESNFPKATDLTFANKL-KQHLGSNSCF---KGERGRA---FSIRHYAG 689
P+G+ S+L+EE FPKATD +F N L +HLG ++ F K +G+A FS+ HYAG
Sbjct: 525 -XPMGIFSILEEECMFPKATDTSFXNXLYDEHLGKSNNFQKPKPAKGKAEAHFSLVHYAG 583
Query: 690 EVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDTQK 749
V Y+ +G+LE N DPL +I L + L L +
Sbjct: 584 TVDYNISGWLEXNXDPLNETVIGLYQXSSVXTLALLFATYGGEAEGGGGKKGGKKKGSSF 643
Query: 750 QSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRI 809
Q+V F+ L LM L +T PHF+RCI PN PG E +LVL Q RC GVLE +RI
Sbjct: 644 QTVSALFRENLNXLMANLRSTHPHFVRCIIPNETXTPGAMEHELVLHQLRCNGVLEGIRI 703
Query: 810 SRSGYPTRMRHQEFAGRYGVL----LSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKL 865
R G+P+R+ + +F RY VL + E Q D S +L +V Y G+T +
Sbjct: 704 CRKGFPSRVLYADFKQRYRVLNASAIPEGQF-MDSKKASEKLLGGGDVDHTQYAFGHTXV 762
Query: 866 YLRSGQLAALEDRRKQVLQAIIRLQ--KCFRGYQARSRFRELC 906
+ +G L LE+ R L II +C RG+ R +R +
Sbjct: 763 FFXAGLLGLLEEMRDDXLAEIITATQARC-RGFLMRVEYRAMV 804
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 284/759 (37%), Positives = 414/759 (54%), Gaps = 34/759 (4%)
Query: 189 NGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIA 248
+G +++ ++ NP +D+ +L+ LNE SVL+N++ RY +IY+ +G +
Sbjct: 40 SGRRLRLPRDQIQRMNPPKFSKAEDMAELTCLNEASVLHNLRERYYSGLIYTYSGLFCVV 99
Query: 249 VNPFKAVPIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGDGVNQSIIISGESGAGK 306
+NP+K +PIY + YR K PHVYA+ + AY M+ D +QSI+ +GESGAGK
Sbjct: 100 INPYKQLPIYTEAIVEMYRGKKRHEVPPHVYAVTEGAYRSMLQDREDQSILCTGESGAGK 159
Query: 307 TETAKFAMQYLAALGGGSEG---------IEYEILQTNHILEAFGNAKTSRNDNSSRFGK 357
TE K +QYLA + +G +E ++LQ N ILEAFGNAKT +NDNSSRFGK
Sbjct: 160 TENTKKVIQYLAHVASSPKGRKEPGVPGELERQLLQANPILEAFGNAKTVKNDNSSRFGK 219
Query: 358 LIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVA 417
I I+F G I GA I+T+LLEKSR ++ A E S+HIFYQL GA LK L L+
Sbjct: 220 FIRINFDVAGYIVGANIETYLLEKSRAIRQAKDECSFHIFYQLLGGAGEQLKADLLLEPC 279
Query: 418 NDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQV 477
+ Y +L + + + F +E+L ++ E+ M++AVL GNI+ +
Sbjct: 280 SHYRFLTNGPSSSPG--QERELFQETLESLRVLGFSHEEIISMLRMVSAVLQFGNIALKR 337
Query: 478 IDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDA 537
N + + + A L+G + AL T +I+ G+D + K T +QA + +A
Sbjct: 338 ERNTDQATMPDNTAAQKLCRLLGLGVTDFSRALLTPRIKVGRDYVQKAQTKEQADFALEA 397
Query: 538 LAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERL 597
LAK Y LF W+V ++N++L+ + + ILDI GFE F+ NSFEQ CINY NE+L
Sbjct: 398 LAKATYERLFRWLVLRLNRALDRSPRQGASFLGILDIAGFEIFQLNSFEQLCINYTNEKL 457
Query: 598 QQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLNLIEK--KPLGVLSLLDEESNFPK 654
QQ FN +F LEQEEY+ +G+ WT ++F D + C++LIE+ P G+L+LLDEE FPK
Sbjct: 458 QQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGLLALLDEECWFPK 517
Query: 655 ATDLTFANKLKQHLGSNSCFKGERG----RAFSIRHYAGEVPYDTNGFLEKNRDPLQTDI 710
ATD +F K+ Q G + F+ R FS+ HYAG+V Y N +L KN DPL ++
Sbjct: 518 ATDKSFVEKVAQEQGGHPKFQRPRHLRDQADFSVLHYAGKVDYKANEWLMKNMDPLNDNV 577
Query: 711 IQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDTQK------QSVGTKFKGQLFKLM 764
LL T ++ + ++VG +K L +LM
Sbjct: 578 AALLHQSTDRLTAEIWKDVEGIVGLEQVSSLGDGPPGGRPRRGMFRTVGQLYKESLSRLM 637
Query: 765 HQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFA 824
L NT P F+RCI PN ++ G E LVL Q RC GVLE +RI R G+P R+ QEF
Sbjct: 638 ATLSNTNPSFVRCIVPNHEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFPNRILFQEFR 697
Query: 825 GRYGVLLSE--KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRR--- 879
RY +L + D ++Q + P +Y+VG +K++ R+G LA LE+ R
Sbjct: 698 QRYEILTPNAIPKGFMDGKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQLEEERASE 757
Query: 880 ---KQVLQAIIRLQKCFRGYQARSRFRELCNGVITLQSF 915
L+ L + QA R+ + + ++QSF
Sbjct: 758 QTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSF 796
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 274/772 (35%), Positives = 421/772 (54%), Gaps = 35/772 (4%)
Query: 161 VWCRLEDGKWESGMIQSTSGDEAFV--LLSNGNVVKVSTGELLPANPDILEGVDDLIQLS 218
VW ++ G I D + L G ++ PA D + V+D L
Sbjct: 7 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 66
Query: 219 YLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVP-IYGNKFITAYRQKVMDS--PH 275
YLNE ++L+NI+ RYS+D IY+ +LIAVNP+ +P IY ++ I +Y+ K + + PH
Sbjct: 67 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 126
Query: 276 VYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTN 335
V+AIAD A+ +M ++QSII+SGESGAGKTE KF ++YL G + I+ I++ N
Sbjct: 127 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 186
Query: 336 HILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYH 395
+LEAFGNAKT RN+NSSRFGK +EIHF+ + G + +LLEKSR+ ER+YH
Sbjct: 187 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 246
Query: 396 IFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKE 455
IFY+LCAGA ++ERL+L +++ YLN+ L +DD +F + A+ + + E
Sbjct: 247 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDE 306
Query: 456 DREQTFAMLAAVLWLGNISFQVIDNEN---HVEVIADEAVTTAAMLMGCSSDELMLALST 512
++ F ++A VL LGNI F+ + + +++ + +A+ A L+G D+L ++L+T
Sbjct: 307 EKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTT 366
Query: 513 HKI--QAG--KDSIAK-KLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGR 567
+ AG K ++ K L ++QA ++RDALAK +Y LFD +V ++N+ + +
Sbjct: 367 RVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSY 424
Query: 568 SINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFED 627
I +LDI GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y+ +G+ V + D
Sbjct: 425 FIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVD 484
Query: 628 NEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQ--------------HLGSNSC 673
N++C++LIE + +G+L +LDEE+ P+ +D F + + Q L +
Sbjct: 485 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRN 544
Query: 674 FKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFXXXXXXXX 733
+ + G F IRH+AG V Y+T F+EKN D L L S C+ F
Sbjct: 545 IRDDEG--FIIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESS 598
Query: 734 XXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDL 793
SVG KFK QL L+ +L +T FIRCIKPN K +E
Sbjct: 599 TNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQ 658
Query: 794 VLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNV 853
+L Q +C G++ ++ + + G+P+R E Y + +K DP A+ + +
Sbjct: 659 ILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGL 718
Query: 854 LPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFREL 905
Y+ G TK++ R G+ A + K + L K + SR++++
Sbjct: 719 NEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWLICSRWKKV 770
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 274/772 (35%), Positives = 421/772 (54%), Gaps = 35/772 (4%)
Query: 161 VWCRLEDGKWESGMIQSTSGDEAFV--LLSNGNVVKVSTGELLPANPDILEGVDDLIQLS 218
VW ++ G I D + L G ++ PA D + V+D L
Sbjct: 6 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 65
Query: 219 YLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVP-IYGNKFITAYRQKVMDS--PH 275
YLNE ++L+NI+ RYS+D IY+ +LIAVNP+ +P IY ++ I +Y+ K + + PH
Sbjct: 66 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 125
Query: 276 VYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTN 335
V+AIAD A+ +M ++QSII+SGESGAGKTE KF ++YL G + I+ I++ N
Sbjct: 126 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 185
Query: 336 HILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYH 395
+LEAFGNAKT RN+NSSRFGK +EIHF+ + G + +LLEKSR+ ER+YH
Sbjct: 186 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 245
Query: 396 IFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKE 455
IFY+LCAGA ++ERL+L +++ YLN+ L +DD +F + A+ + + E
Sbjct: 246 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDE 305
Query: 456 DREQTFAMLAAVLWLGNISFQVIDNEN---HVEVIADEAVTTAAMLMGCSSDELMLALST 512
++ F ++A VL LGNI F+ + + +++ + +A+ A L+G D+L ++L+T
Sbjct: 306 EKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTT 365
Query: 513 HKI--QAG--KDSIAK-KLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGR 567
+ AG K ++ K L ++QA ++RDALAK +Y LFD +V ++N+ + +
Sbjct: 366 RVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSY 423
Query: 568 SINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFED 627
I +LDI GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y+ +G+ V + D
Sbjct: 424 FIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVD 483
Query: 628 NEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQ--------------HLGSNSC 673
N++C++LIE + +G+L +LDEE+ P+ +D F + + Q L +
Sbjct: 484 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRN 543
Query: 674 FKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFXXXXXXXX 733
+ + G F IRH+AG V Y+T F+EKN D L L S C+ F
Sbjct: 544 IRDDEG--FIIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESS 597
Query: 734 XXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDL 793
SVG KFK QL L+ +L +T FIRCIKPN K +E
Sbjct: 598 TNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQ 657
Query: 794 VLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNV 853
+L Q +C G++ ++ + + G+P+R E Y + +K DP A+ + +
Sbjct: 658 ILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGL 717
Query: 854 LPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFREL 905
Y+ G TK++ R G+ A + K + L K + SR++++
Sbjct: 718 NEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWLICSRWKKV 769
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 274/772 (35%), Positives = 420/772 (54%), Gaps = 35/772 (4%)
Query: 161 VWCRLEDGKWESGMIQSTSGDEAFV--LLSNGNVVKVSTGELLPANPDILEGVDDLIQLS 218
VW ++ G I D + L G ++ PA D + V+D L
Sbjct: 6 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 65
Query: 219 YLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVP-IYGNKFITAYRQKVMDS--PH 275
YLNE ++L+NI+ RYS+D IY+ +LIAVNP+ +P IY ++ I +Y+ K + + PH
Sbjct: 66 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 125
Query: 276 VYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTN 335
V+AIAD A+ +M ++QSII+SGESGAGKTE KF ++YL G + I I++ N
Sbjct: 126 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIYDRIVEAN 185
Query: 336 HILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYH 395
+LEAFGNAKT RN+NSSRFGK +EIHF+ + G + +LLEKSR+ ER+YH
Sbjct: 186 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 245
Query: 396 IFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKE 455
IFY+LCAGA ++ERL+L +++ YLN+ L +DD +F + A+ + + E
Sbjct: 246 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDE 305
Query: 456 DREQTFAMLAAVLWLGNISFQVIDNEN---HVEVIADEAVTTAAMLMGCSSDELMLALST 512
++ F ++A VL LGNI F+ + + +++ + +A+ A L+G D+L ++L+T
Sbjct: 306 EKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTT 365
Query: 513 HKI--QAG--KDSIAK-KLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGR 567
+ AG K ++ K L ++QA ++RDALAK +Y LFD +V ++N+ + +
Sbjct: 366 RVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF--ETSSY 423
Query: 568 SINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFED 627
I +LDI GFE F+ NSFEQFCINY NE+LQQ FN + K EQE Y+ +G+ V + D
Sbjct: 424 FIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVD 483
Query: 628 NEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQ--------------HLGSNSC 673
N++C++LIE + +G+L +LDEE+ P+ +D F + + Q L +
Sbjct: 484 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRN 543
Query: 674 FKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFXXXXXXXX 733
+ + G F IRH+AG V Y+T F+EKN D L L S C+ F
Sbjct: 544 IRDDEG--FIIRHFAGAVCYETTQFVEKNNDALHMS----LESLICESRDKFIRELFESS 597
Query: 734 XXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDL 793
SVG KFK QL L+ +L +T FIRCIKPN K +E
Sbjct: 598 TNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGAQ 657
Query: 794 VLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNV 853
+L Q +C G++ ++ + + G+P+R E Y + +K DP A+ + +
Sbjct: 658 ILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGL 717
Query: 854 LPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFREL 905
Y+ G TK++ R G+ A + K + L K + SR++++
Sbjct: 718 NEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKRVNHWLICSRWKKV 769
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 270/769 (35%), Positives = 412/769 (53%), Gaps = 61/769 (7%)
Query: 161 VWCRLEDGKWESGMIQSTSGDEAFV--LLSNGNVVKVSTGELLPANPDILEGVDDLIQLS 218
VW ++ G I D + L G ++ PA D + V+D L
Sbjct: 6 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 65
Query: 219 YLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVP-IYGNKFITAYRQKVMDS--PH 275
YLNE ++L+NI+ RYS+D IY+ +LIAVNP+ +P IY ++ I +Y+ K + + PH
Sbjct: 66 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 125
Query: 276 VYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTN 335
V+AIAD A+ +M ++QSII+SGESGAGKTE KF ++YL G + I+ I++ N
Sbjct: 126 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 185
Query: 336 HILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYH 395
+LEAFGNAKT RN+NSSRFGK +EIHF+ + G + +LLEKSR+ ER+YH
Sbjct: 186 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 245
Query: 396 IFYQLCAGAPSFLKERLNLKVANDYNYLN--------------------------QSECL 429
IFY+LCAGA ++ERL+L +++ YLN ++ L
Sbjct: 246 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 305
Query: 430 TIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNEN---HVEV 486
G+DD +F + A+ + + E++ F ++A VL LGNI F+ + + +++
Sbjct: 306 KDPGLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 365
Query: 487 IADEAVTTAAMLMGCSSDELMLALSTHKI--QAG--KDSIAK-KLTLQQAIDSRDALAKF 541
+ +A+ A L+G D+L ++L+T + AG K ++ K L ++QA ++RDALAK
Sbjct: 366 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 425
Query: 542 IYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHF 601
+Y LFD +V ++N+ + + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 426 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 483
Query: 602 NRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFA 661
N + K EQE Y+ +G+ V + DN++C++LIE + +G+L +LDEE+ P+ +D F
Sbjct: 484 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 543
Query: 662 NKLKQ--------------HLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQ 707
+ + Q L + + + G F IRH+AG V Y+T F+EKN D L
Sbjct: 544 SAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEG--FIIRHFAGAVCYETTQFVEKNNDALH 601
Query: 708 TDIIQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQL 767
L S C+ F SVG KFK QL L+ +L
Sbjct: 602 MS----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKL 657
Query: 768 ENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRY 827
+T FIRCIKPN K +E +L Q +C G++ ++ + + G+P+R E Y
Sbjct: 658 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 717
Query: 828 GVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALE 876
+ +K DP A+ + + Y+ G TK++ R G+ A +
Sbjct: 718 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 285/860 (33%), Positives = 444/860 (51%), Gaps = 88/860 (10%)
Query: 161 VWCRLEDGKWESGMIQSTSGDEAFV--LLSNGNVVKVSTGELLPANPDILEGVDDLIQLS 218
VW ++ G I D + L G ++ PA D + V+D L
Sbjct: 7 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 66
Query: 219 YLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVP-IYGNKFITAYRQKVMDS--PH 275
YLNE ++L+NI+ RYS+D IY+ +LIAVNP+ +P IY ++ I +Y+ K + + PH
Sbjct: 67 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 126
Query: 276 VYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTN 335
V+AIAD A+ +M ++QSII+SGESGAGKTE KF ++YL G + I+ I++ N
Sbjct: 127 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 186
Query: 336 HILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYH 395
+LEAFGNAKT RN+NSSRFGK +EIHF+ + G + +LLEKSR+ ER+YH
Sbjct: 187 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 246
Query: 396 IFYQLCAGAPSFLKERLNLKVANDYNYLN--------------------------QSECL 429
IFY+LCAGA ++ERL+L +++ YLN ++ L
Sbjct: 247 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 306
Query: 430 TIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNEN---HVEV 486
+DD +F + A+ + + E++ F ++A VL LGNI F+ + + +++
Sbjct: 307 KDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 366
Query: 487 IADEAVTTAAMLMGCSSDELMLALSTHKI--QAG--KDSIAK-KLTLQQAIDSRDALAKF 541
+ +A+ A L+G D+L ++L+T + AG K ++ K L ++QA ++RDALAK
Sbjct: 367 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 426
Query: 542 IYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHF 601
+Y LFD +V ++N+ + + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 427 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 484
Query: 602 NRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFA 661
N + K EQE Y+ +G+ V + DN++C++LIE + +G+L +LDEE+ P+ +D F
Sbjct: 485 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 544
Query: 662 NKLKQ--------------HLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQ 707
+ + Q L + + + G F IRH+AG V Y+T F+EKN D L
Sbjct: 545 SAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEG--FIIRHFAGAVCYETTQFVEKNNDALH 602
Query: 708 TDIIQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQL 767
L S C+ F SVG KFK QL L+ +L
Sbjct: 603 MS----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKL 658
Query: 768 ENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRY 827
+T FIRCIKPN K +E +L Q +C G++ ++ + + G+P+R E Y
Sbjct: 659 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 718
Query: 828 GVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAII 887
+ +K DP A+ + + Y+ G TK++ R G+ A + K +
Sbjct: 719 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLA 778
Query: 888 RLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPEIRDE-QLRE 946
L K + SR++++ + CS V +++++ + R
Sbjct: 779 ELVKRVNHWLICSRWKKV------------------------QWCSLSVIKLKNKIKYRA 814
Query: 947 IIC--LQSAIRGWLVRKQLK 964
C +Q IR WL +++ K
Sbjct: 815 EACIKMQKTIRMWLCKRRHK 834
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 274/798 (34%), Positives = 422/798 (52%), Gaps = 61/798 (7%)
Query: 161 VWCRLEDGKWESGMIQSTSGDEAFV--LLSNGNVVKVSTGELLPANPDILEGVDDLIQLS 218
VW ++ G I D + L G ++ PA D + V+D L
Sbjct: 6 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 65
Query: 219 YLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVP-IYGNKFITAYRQKVMDS--PH 275
YLNE ++L+NI+ RYS+D IY+ +LIAVNP+ +P IY ++ I +Y+ K + + PH
Sbjct: 66 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 125
Query: 276 VYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTN 335
V+AIAD A+ +M ++QSII+SGESGAGKTE KF ++YL G + I+ I++ N
Sbjct: 126 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 185
Query: 336 HILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYH 395
+LEAFGNAKT RN+NSSRFGK +EIHF+ + G + +LLEKSR+ ER+YH
Sbjct: 186 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 245
Query: 396 IFYQLCAGAPSFLKERLNLKVANDYNYLN--------------------------QSECL 429
IFY+LCAGA ++ERL+L +++ YLN ++ L
Sbjct: 246 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 305
Query: 430 TIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNEN---HVEV 486
+DD +F + A+ + + E++ F ++A VL LGNI F+ + + +++
Sbjct: 306 KDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 365
Query: 487 IADEAVTTAAMLMGCSSDELMLALSTHKI--QAG--KDSIAK-KLTLQQAIDSRDALAKF 541
+ +A+ A L+G D+L ++L+T + AG K ++ K L ++QA ++RDALAK
Sbjct: 366 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 425
Query: 542 IYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHF 601
+Y LFD +V ++N+ + + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 426 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 483
Query: 602 NRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFA 661
N + K EQE Y+ +G+ V + DN++C++LIE + +G+L +LDEE+ P+ +D F
Sbjct: 484 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 543
Query: 662 NKLKQ--------------HLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQ 707
+ + Q L + + + G F IRH+AG V Y+T F+EKN D L
Sbjct: 544 SAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEG--FIIRHFAGAVCYETTQFVEKNNDALH 601
Query: 708 TDIIQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQL 767
L S C+ F SVG KFK QL L+ +L
Sbjct: 602 MS----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKL 657
Query: 768 ENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRY 827
+T FIRCIKPN K +E +L Q +C G++ ++ + + G+P+R E Y
Sbjct: 658 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 717
Query: 828 GVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAII 887
+ +K DP A+ + + Y+ G TK++ R G+ A + K +
Sbjct: 718 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLA 777
Query: 888 RLQKCFRGYQARSRFREL 905
L K + SR++++
Sbjct: 778 ELVKRVNHWLICSRWKKV 795
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 439 bits (1130), Expect = e-123, Method: Compositional matrix adjust.
Identities = 269/769 (34%), Positives = 411/769 (53%), Gaps = 61/769 (7%)
Query: 161 VWCRLEDGKWESGMIQSTSGDEAFV--LLSNGNVVKVSTGELLPANPDILEGVDDLIQLS 218
VW ++ G I D + L G ++ PA D + V+D L
Sbjct: 16 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 75
Query: 219 YLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVP-IYGNKFITAYRQKVMDS--PH 275
YLNE ++L+NI+ RYS+D IY+ +LIAVNP+ +P IY ++ I +Y+ K + + PH
Sbjct: 76 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 135
Query: 276 VYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTN 335
V+AIAD A+ +M ++QSII+SGESGAGKTE KF ++YL G + I+ I++ N
Sbjct: 136 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 195
Query: 336 HILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYH 395
+LEAFGNAKT RN+NSSRFGK +EIHF+ + G + +LLEKSR+ ER+YH
Sbjct: 196 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 255
Query: 396 IFYQLCAGAPSFLKERLNLKVANDYNYLN--------------------------QSECL 429
IFY+LCAGA ++ERL+L +++ YLN ++ L
Sbjct: 256 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 315
Query: 430 TIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNEN---HVEV 486
+DD +F + A+ + + E++ F ++A VL LGNI F+ + + +++
Sbjct: 316 KDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 375
Query: 487 IADEAVTTAAMLMGCSSDELMLALSTHKI--QAG--KDSIAK-KLTLQQAIDSRDALAKF 541
+ +A+ A L+G D+L ++L+T + AG K ++ K L ++QA ++RDALAK
Sbjct: 376 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 435
Query: 542 IYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHF 601
+Y LFD +V ++N+ + + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 436 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 493
Query: 602 NRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFA 661
N + K EQE Y+ +G+ V + DN++C++LIE + +G+L +LDEE+ P+ +D F
Sbjct: 494 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 553
Query: 662 NKLKQ--------------HLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQ 707
+ + Q L + + + G F IRH+AG V Y+T F+EKN D L
Sbjct: 554 SAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEG--FIIRHFAGAVCYETTQFVEKNNDALH 611
Query: 708 TDIIQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQL 767
L S C+ F SVG KFK QL L+ +L
Sbjct: 612 MS----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKL 667
Query: 768 ENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRY 827
+T FIRCIKPN K +E +L Q +C G++ ++ + + G+P+R E Y
Sbjct: 668 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 727
Query: 828 GVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALE 876
+ +K DP A+ + + Y+ G TK++ R G+ A +
Sbjct: 728 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 776
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 269/769 (34%), Positives = 411/769 (53%), Gaps = 61/769 (7%)
Query: 161 VWCRLEDGKWESGMIQSTSGDEAFV--LLSNGNVVKVSTGELLPANPDILEGVDDLIQLS 218
VW ++ G I D + L G ++ PA D + V+D L
Sbjct: 3 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 62
Query: 219 YLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVP-IYGNKFITAYRQKVMDS--PH 275
YLNE ++L+NI+ RYS+D IY+ +LIAVNP+ +P IY ++ I +Y+ K + + PH
Sbjct: 63 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 122
Query: 276 VYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTN 335
V+AIAD A+ +M ++QSII+SGESGAGKTE KF ++YL G + I+ I++ N
Sbjct: 123 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 182
Query: 336 HILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYH 395
+LEAFGNAKT RN+NSSRFGK +EIHF+ + G + +LLEKSR+ ER+YH
Sbjct: 183 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 242
Query: 396 IFYQLCAGAPSFLKERLNLKVANDYNYLN--------------------------QSECL 429
IFY+LCAGA ++ERL+L +++ YLN ++ L
Sbjct: 243 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 302
Query: 430 TIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNEN---HVEV 486
+DD +F + A+ + + E++ F ++A VL LGNI F+ + + +++
Sbjct: 303 KDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 362
Query: 487 IADEAVTTAAMLMGCSSDELMLALSTHKI--QAG--KDSIAK-KLTLQQAIDSRDALAKF 541
+ +A+ A L+G D+L ++L+T + AG K ++ K L ++QA ++RDALAK
Sbjct: 363 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 422
Query: 542 IYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHF 601
+Y LFD +V ++N+ + + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 423 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 480
Query: 602 NRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFA 661
N + K EQE Y+ +G+ V + DN++C++LIE + +G+L +LDEE+ P+ +D F
Sbjct: 481 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 540
Query: 662 NKLKQ--------------HLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQ 707
+ + Q L + + + G F IRH+AG V Y+T F+EKN D L
Sbjct: 541 SAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEG--FIIRHFAGAVCYETTQFVEKNNDALH 598
Query: 708 TDIIQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQL 767
L S C+ F SVG KFK QL L+ +L
Sbjct: 599 MS----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKL 654
Query: 768 ENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRY 827
+T FIRCIKPN K +E +L Q +C G++ ++ + + G+P+R E Y
Sbjct: 655 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 714
Query: 828 GVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALE 876
+ +K DP A+ + + Y+ G TK++ R G+ A +
Sbjct: 715 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 763
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 269/769 (34%), Positives = 411/769 (53%), Gaps = 61/769 (7%)
Query: 161 VWCRLEDGKWESGMIQSTSGDEAFV--LLSNGNVVKVSTGELLPANPDILEGVDDLIQLS 218
VW ++ G I D + L G ++ PA D + V+D L
Sbjct: 16 VWAPHPTDGFQVGNIVRRGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 75
Query: 219 YLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVP-IYGNKFITAYRQKVMDS--PH 275
YLNE ++L+NI+ RYS+D IY+ +LIAVNP+ +P IY ++ I +Y+ K + + PH
Sbjct: 76 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 135
Query: 276 VYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTN 335
V+AIAD A+ +M ++QSII+SGESGAGKTE KF ++YL G + I+ I++ N
Sbjct: 136 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 195
Query: 336 HILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYH 395
+LEAFGNAKT RN+NSSRFGK +EIHF+ + G + +LLEKSR+ ER+YH
Sbjct: 196 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 255
Query: 396 IFYQLCAGAPSFLKERLNLKVANDYNYLN--------------------------QSECL 429
IFY+LCAGA ++ERL+L +++ YLN ++ L
Sbjct: 256 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 315
Query: 430 TIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNEN---HVEV 486
+DD +F + A+ + + E++ F ++A VL LGNI F+ + + +++
Sbjct: 316 KDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 375
Query: 487 IADEAVTTAAMLMGCSSDELMLALSTHKI--QAG--KDSIAK-KLTLQQAIDSRDALAKF 541
+ +A+ A L+G D+L ++L+T + AG K ++ K L ++QA ++RDALAK
Sbjct: 376 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 435
Query: 542 IYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHF 601
+Y LFD +V ++N+ + + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 436 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 493
Query: 602 NRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFA 661
N + K EQE Y+ +G+ V + DN++C++LIE + +G+L +LDEE+ P+ +D F
Sbjct: 494 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 553
Query: 662 NKLKQ--------------HLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQ 707
+ + Q L + + + G F IRH+AG V Y+T F+EKN D L
Sbjct: 554 SAVHQKHKDHFRLSIPRKSKLAIHENIRDDEG--FIIRHFAGAVCYETTQFVEKNNDALH 611
Query: 708 TDIIQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQL 767
L S C+ F SVG KFK QL L+ +L
Sbjct: 612 MS----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKL 667
Query: 768 ENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRY 827
+T FIRCIKPN K +E +L Q +C G++ ++ + + G+P+R E Y
Sbjct: 668 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 727
Query: 828 GVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALE 876
+ +K DP A+ + + Y+ G TK++ R G+ A +
Sbjct: 728 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 776
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 272/798 (34%), Positives = 420/798 (52%), Gaps = 61/798 (7%)
Query: 161 VWCRLEDGKWESGMIQSTSGDEAFV--LLSNGNVVKVSTGELLPANPDILEGVDDLIQLS 218
VW ++ G I D + L G ++ PA D + V+D L
Sbjct: 7 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 66
Query: 219 YLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVP-IYGNKFITAYRQKVMDS--PH 275
YLNE ++L+NI+ RYS+D IY+ +LIAVNP+ +P IY ++ I +Y+ K + + PH
Sbjct: 67 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 126
Query: 276 VYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTN 335
V+AIAD A+ +M ++QSII+SGESGAGKTE KF ++YL G + I+ I++ N
Sbjct: 127 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDDRIVEAN 186
Query: 336 HILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYH 395
+LEAFGNAKT RN+NSSRFGK +EIHF+ + G + +LLEKSR+ ER+YH
Sbjct: 187 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 246
Query: 396 IFYQLCAGAPSFLKERLNLKVANDYNYLN--------------------------QSECL 429
IFY+LCAGA ++ERL+L +++ YLN ++ L
Sbjct: 247 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 306
Query: 430 TIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNEN---HVEV 486
+DD +F + A+ + + E++ F ++A VL LGNI F+ + + +++
Sbjct: 307 KDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 366
Query: 487 IADEAVTTAAMLMGCSSDELMLALSTHKI----QAGKDSIAK-KLTLQQAIDSRDALAKF 541
+ +A+ A L+G D+L ++L+T + K ++ K L ++QA ++RDALAK
Sbjct: 367 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 426
Query: 542 IYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHF 601
+Y LFD +V ++N+ + + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 427 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 484
Query: 602 NRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFA 661
N + K EQE Y+ +G+ V + DN++C++LIE + +G+L +LDEE+ P+ +D F
Sbjct: 485 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 544
Query: 662 NKLKQ--------------HLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQ 707
+ + Q L + + + G F IRH+AG V Y+T F+EKN D L
Sbjct: 545 SAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEG--FIIRHFAGAVCYETTQFVEKNNDALH 602
Query: 708 TDIIQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQL 767
L S C+ F SVG KFK QL L+ +L
Sbjct: 603 MS----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKL 658
Query: 768 ENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRY 827
+T FIRCIKPN K +E +L Q +C G++ ++ + + G+P+R E Y
Sbjct: 659 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 718
Query: 828 GVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAII 887
+ +K DP A+ + + Y+ G TK++ R G+ A + K +
Sbjct: 719 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLA 778
Query: 888 RLQKCFRGYQARSRFREL 905
L K + SR++++
Sbjct: 779 ELVKRVNHWLICSRWKKV 796
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 274/798 (34%), Positives = 421/798 (52%), Gaps = 61/798 (7%)
Query: 161 VWCRLEDGKWESGMIQSTSGDEAFV--LLSNGNVVKVSTGELLPANPDILEGVDDLIQLS 218
VW ++ G I D + L G ++ PA D + V+D L
Sbjct: 6 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 65
Query: 219 YLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVP-IYGNKFITAYRQKVMDS--PH 275
YLNE ++L+NI+ RYS+D IY+ +LIAVNP+ +P IY ++ I +Y+ K + + PH
Sbjct: 66 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 125
Query: 276 VYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTN 335
V+AIAD A+ +M ++QSII+SGESGAGKTE KF ++YL G + I I++ N
Sbjct: 126 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIYDRIVEAN 185
Query: 336 HILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYH 395
+LEAFGNAKT RN+NSSRFGK +EIHF+ + G + +LLEKSR+ ER+YH
Sbjct: 186 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 245
Query: 396 IFYQLCAGAPSFLKERLNLKVANDYNYLN--------------------------QSECL 429
IFY+LCAGA ++ERL+L +++ YLN ++ L
Sbjct: 246 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 305
Query: 430 TIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNEN---HVEV 486
+DD +F + A+ + + E++ F ++A VL LGNI F+ + + +++
Sbjct: 306 KDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 365
Query: 487 IADEAVTTAAMLMGCSSDELMLALSTHKI--QAG--KDSIAK-KLTLQQAIDSRDALAKF 541
+ +A+ A L+G D+L ++L+T + AG K ++ K L ++QA ++RDALAK
Sbjct: 366 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 425
Query: 542 IYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHF 601
+Y LFD +V ++N+ + + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 426 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 483
Query: 602 NRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFA 661
N + K EQE Y+ +G+ V + DN++C++LIE + +G+L +LDEE+ P+ +D F
Sbjct: 484 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 543
Query: 662 NKLKQ--------------HLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQ 707
+ + Q L + + + G F IRH+AG V Y+T F+EKN D L
Sbjct: 544 SAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEG--FIIRHFAGAVCYETTQFVEKNNDALH 601
Query: 708 TDIIQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQL 767
L S C+ F SVG KFK QL L+ +L
Sbjct: 602 MS----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKL 657
Query: 768 ENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRY 827
+T FIRCIKPN K +E +L Q +C G++ ++ + + G+P+R E Y
Sbjct: 658 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 717
Query: 828 GVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAII 887
+ +K DP A+ + + Y+ G TK++ R G+ A + K +
Sbjct: 718 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLA 777
Query: 888 RLQKCFRGYQARSRFREL 905
L K + SR++++
Sbjct: 778 ELVKRVNHWLICSRWKKV 795
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 269/769 (34%), Positives = 410/769 (53%), Gaps = 61/769 (7%)
Query: 161 VWCRLEDGKWESGMIQSTSGDEAFV--LLSNGNVVKVSTGELLPANPDILEGVDDLIQLS 218
VW ++ G I D + L G ++ PA D + V+D L
Sbjct: 4 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVEDNCSLM 63
Query: 219 YLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVP-IYGNKFITAYRQKVMDS--PH 275
YLNE ++L+NI+ RYS+D IY+ +LIAVNP+ +P IY ++ I +Y+ K + + PH
Sbjct: 64 YLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPPH 123
Query: 276 VYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTN 335
V+AIAD A+ +M ++QSII+SGESGAGKTE KF ++YL G + I I++ N
Sbjct: 124 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIYDRIVEAN 183
Query: 336 HILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYH 395
+LEAFGNAKT RN+NSSRFGK +EIHF+ + G + +LLEKSR+ ER+YH
Sbjct: 184 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKEERNYH 243
Query: 396 IFYQLCAGAPSFLKERLNLKVANDYNYLN--------------------------QSECL 429
IFY+LCAGA ++ERL+L +++ YLN ++ L
Sbjct: 244 IFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYLKAGSL 303
Query: 430 TIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNEN---HVEV 486
+DD +F + A+ + + E++ F ++A VL LGNI F+ + + +++
Sbjct: 304 KDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKN 363
Query: 487 IADEAVTTAAMLMGCSSDELMLALSTHKI--QAG--KDSIAK-KLTLQQAIDSRDALAKF 541
+ +A+ A L+G D+L ++L+T + AG K ++ K L ++QA ++RDALAK
Sbjct: 364 KSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKT 423
Query: 542 IYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHF 601
+Y LFD +V ++N+ + + I +LDI GFE F+ NSFEQFCINY NE+LQQ F
Sbjct: 424 VYSHLFDHVVNRVNQCFPF--ETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFF 481
Query: 602 NRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFA 661
N + K EQE Y+ +G+ V + DN++C++LIE + +G+L +LDEE+ P+ +D F
Sbjct: 482 NERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFT 541
Query: 662 NKLKQ--------------HLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQ 707
+ + Q L + + + G F IRH+AG V Y+T F+EKN D L
Sbjct: 542 SAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEG--FIIRHFAGAVCYETTQFVEKNNDALH 599
Query: 708 TDIIQLLSSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQL 767
L S C+ F SVG KFK QL L+ +L
Sbjct: 600 MS----LESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKL 655
Query: 768 ENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRY 827
+T FIRCIKPN K +E +L Q +C G++ ++ + + G+P+R E Y
Sbjct: 656 RSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMY 715
Query: 828 GVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALE 876
+ +K DP A+ + + Y+ G TK++ R G+ A +
Sbjct: 716 KKYMPDKLARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 764
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 434 bits (1116), Expect = e-121, Method: Compositional matrix adjust.
Identities = 264/701 (37%), Positives = 392/701 (55%), Gaps = 44/701 (6%)
Query: 209 EGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY-- 266
EGV D + L+ + E + + N+ R+ D IY+ G V+I+ NPFK + IY I AY
Sbjct: 8 EGVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNLNIYKESDIKAYNG 67
Query: 267 RQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGG--- 323
R K PH+YA+A+ AY M NQ +IISGESGAGKTE +K MQ+L +
Sbjct: 68 RYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQSP 127
Query: 324 -SEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKS 382
E I +L +N +LEAFGNAKT RNDNSSRFGK +E+ F+A G G KI +LLEKS
Sbjct: 128 NGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKS 187
Query: 383 RVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKV-ANDYNYLNQSECLTIDGVDDAQNFH 441
RVV GERS+HIFYQ+ G + L L A Y YL +S C + +DD+ F
Sbjct: 188 RVVGRTQGERSFHIFYQMLKGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDSGEFK 247
Query: 442 NLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNE----NHVEVIADEAVTTAAM 497
+++A++ + +++ D+ + +LAA+L +GNI+F + V+V +++ AA
Sbjct: 248 IIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAAS 307
Query: 498 LMGCSSDELMLALSTHKIQAGK----DSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQ 553
+ L +AL I G + I+ + QA SRDALAK +Y LF+W+V +
Sbjct: 308 CLKTDQQSLSIALCYRSISTGVGKRCEVISVPMDCNQAAYSRDALAKALYERLFNWLVSK 367
Query: 554 INKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEY 613
IN + + G I ILDIYGFE F+ NSFEQ IN+ NE+LQQ F K EQEEY
Sbjct: 368 INTIINCTTE-KGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEY 426
Query: 614 ELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSC 673
+G++W +E+ +N+ LIEKKP+G++SLLDE K+TD TF + + + N
Sbjct: 427 VREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPH 486
Query: 674 FKG---ERGRA-----FSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQ-L 724
+ + R+ F ++HYAG+V YD GFL+KN+D L D+I + S + ++Q L
Sbjct: 487 LQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPLVQGL 546
Query: 725 FXXXXXXXXXXXXXXXXXXXLDTQK--QSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNS 782
F D++K ++ G++F+ + L+ L PH++RCIK N
Sbjct: 547 FPPTRPE--------------DSKKRPETAGSQFRNAMNALITTLLACSPHYVRCIKSND 592
Query: 783 KQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLS 842
+ G+ +ED V Q R G+LE VR+ R+G+ R+ + F RY +L + S + +
Sbjct: 593 NKQAGVIDEDRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTA 652
Query: 843 ISVA--VLQQFNVLPEMYQVGYTKLYLRS-GQLAALEDRRK 880
+LQQ N+ E ++G TK+++R+ L E++R+
Sbjct: 653 KQATELILQQHNIDKEEIRMGKTKVFIRNPTTLFYFEEKRE 693
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 264/701 (37%), Positives = 391/701 (55%), Gaps = 44/701 (6%)
Query: 209 EGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY-- 266
EGV D + L+ + E + + N+ R+ D IY+ G V+I+ NPFK + IY I AY
Sbjct: 8 EGVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNLNIYKESDIKAYNG 67
Query: 267 RQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGG--- 323
R K PH+YA+A+ AY M NQ +IISGESGAGKTE +K MQ+L +
Sbjct: 68 RYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQSP 127
Query: 324 -SEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKS 382
E I +L +N +LEAFGNAKT RNDNSSRFGK +E+ F+A G G KI +LLEKS
Sbjct: 128 NGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKS 187
Query: 383 RVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKV-ANDYNYLNQSECLTIDGVDDAQNFH 441
RVV GERS+HIFYQ+ G + L L A Y YL +S C + +DD+ F
Sbjct: 188 RVVGRTQGERSFHIFYQMLKGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDSGEFK 247
Query: 442 NLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNE----NHVEVIADEAVTTAAM 497
+++A++ + +++ D+ + +LAA+L +GNI+F + V+V +++ AA
Sbjct: 248 IIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAAS 307
Query: 498 LMGCSSDELMLALSTHKIQAGKDS----IAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQ 553
+ L +AL I G I+ + QA SRDALAK +Y LF+W+V +
Sbjct: 308 CLKTDQQSLSIALCYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKALYERLFNWLVSK 367
Query: 554 INKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEY 613
IN + + G I ILDIYGFE F+ NSFEQ IN+ NE+LQQ F K EQEEY
Sbjct: 368 INTIINCTTE-KGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEY 426
Query: 614 ELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSC 673
+G++W +E+ +N+ LIEKKP+G++SLLDE K+TD TF + + + N
Sbjct: 427 VREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPH 486
Query: 674 FKG---ERGRA-----FSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQ-L 724
+ + R+ F ++HYAG+V YD GFL+KN+D L D+I + S + ++Q L
Sbjct: 487 LQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPLVQGL 546
Query: 725 FXXXXXXXXXXXXXXXXXXXLDTQK--QSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNS 782
F D++K ++ G++F+ + L+ L PH++RCIK N
Sbjct: 547 FPPTRPE--------------DSKKRPETAGSQFRNAMNALITTLLACSPHYVRCIKSND 592
Query: 783 KQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLS 842
+ G+ +ED V Q R G+LE VR+ R+G+ R+ + F RY +L + S + +
Sbjct: 593 NKQAGVIDEDRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTA 652
Query: 843 ISVA--VLQQFNVLPEMYQVGYTKLYLRS-GQLAALEDRRK 880
+LQQ N+ E ++G TK+++R+ L E++R+
Sbjct: 653 KQATELILQQHNIDKEEIRMGKTKVFIRNPTTLFYFEEKRE 693
>pdb|2IX7|C Chain C, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 58
Score = 32.7 bits (73), Expect = 1.2, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 885 AIIRLQKCFRGYQARSRFRELCNGVITLQSFARGENTR 922
A IR+QK RG+ R R+ + IT+Q + RG R
Sbjct: 7 ACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQAR 44
>pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump
pdb|3B8C|B Chain B, Crystal Structure Of A Plasma Membrane Proton Pump
Length = 885
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 9/46 (19%)
Query: 165 LEDGKWESGMIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEG 210
L DGKW S EA +L+ G++V + G+++PA+ +LEG
Sbjct: 135 LRDGKW--------SEQEAAILVP-GDIVSIKLGDIIPADARLLEG 171
>pdb|2P22|C Chain C, Structure Of The Yeast Escrt-i Heterotetramer Core
Length = 192
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 775 IRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMR--HQEFAGRYGVLLS 832
I + KQL +E DL Q+ + +LE RI S Y + H EF+ +YG +
Sbjct: 71 IHAFRDQFKQLEENFE-DLHEQKDKVQALLENARILESKYVASWQDYHSEFSKKYGDIAL 129
Query: 833 EKQLSQD 839
+K+L Q+
Sbjct: 130 KKKLEQN 136
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,864,503
Number of Sequences: 62578
Number of extensions: 1219211
Number of successful extensions: 3568
Number of sequences better than 100.0: 82
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 3021
Number of HSP's gapped (non-prelim): 144
length of query: 1095
length of database: 14,973,337
effective HSP length: 109
effective length of query: 986
effective length of database: 8,152,335
effective search space: 8038202310
effective search space used: 8038202310
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)