BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001349
(1094 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/979 (43%), Positives = 601/979 (61%), Gaps = 50/979 (5%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYV 219
PPKDFVCPIT IF DPVTLETGQTYER+AIQEW+ GN++CPITRQ LS++ LPKTNYV
Sbjct: 511 PPKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSASILPKTNYV 570
Query: 220 LKRLIASWQEQNPG-GLDLSH-SEPMSKSIVPS--------------------------- 250
LKRLI SW+EQNP + S+ + P S PS
Sbjct: 571 LKRLITSWKEQNPELAQEFSNVNTPRGSSCSPSAKDIPMLSTRQRTTDSPNHKNKDYARQ 630
Query: 251 -----------NSPNSVISQATIDGTITELKHAITSLCMSEILNESEMAVLQIERCWLEA 299
SP SV+SQA ++ + LK I+SLC SE L E E AVL+I R ++
Sbjct: 631 RSNRFMPAAITTSPTSVLSQAAVETIVNSLKPYISSLCTSENLPECEEAVLKIARLLKDS 690
Query: 300 SMELDIQIMLSKPAVINGFVEILFNSVDPRVLEATIFLLSELGSRDKSVIHTLTRVESDV 359
I LSKP +ING VEIL S + VL +I++LSEL D SV TL V+SD
Sbjct: 691 KTNPQIHSYLSKPTIINGLVEILSASRNREVLRTSIYILSELIFTDDSVAETLNSVDSDF 750
Query: 360 ERIVALFKKGLLEAVVLIDLLRPSTRTLIEMDMMESLMTVIKKKEE--DFLKMCLKPKSV 417
+ + L K GL EA +LI LRP L +++ SL+ VI+ K E D ++ + PK
Sbjct: 751 DCLATLLKNGLAEAALLIYQLRPVFAQLSAHELIPSLVDVIQNKNEELDDFQLVIDPKDA 810
Query: 418 SVLLLGQMIGDSEESIVSSIANTIVSSKVFESVISSLEAEWAEERIAAVGILLRCMQEDG 477
++ +L Q + +E S A++++S+ +++ LE E R + V +LL CMQ +
Sbjct: 811 AIAILEQTLMGGDEYSRSLNASSVISANGIPTLVKYLER--MEGRRSVVSVLLCCMQAEK 868
Query: 478 KCRNSIADKAELAPVMESFMAASDGERFEIVCFLSELVKLNRRTFNEQILHIIKDEGTYS 537
C+N IA++ EL+PV+E F + +D R V FLSELV+LNRRT QILH IKDEG +S
Sbjct: 869 SCKNLIANRIELSPVLELFHSGNDSVRGTCVEFLSELVQLNRRTSCNQILHTIKDEGAFS 928
Query: 538 SMHTLLVYLQTANHDQCPVVAGLLLQLDLLAEPRKMSIYREEAIDTLISCLRNSDYPAAQ 597
+MHT LVYLQ A + VA LLLQLDLLAEPRKMSIYREEA++TLI L D+ Q
Sbjct: 929 TMHTFLVYLQMAPMEHQLAVASLLLQLDLLAEPRKMSIYREEAVETLIEALWQKDFSNTQ 988
Query: 598 LAAAKTIVSLQGRFTTSGKSLTRAMLLKRAGVGKSYKNLTRTEQIGNICGEDDDTSEEEK 657
+ A ++ L G ++SGKS T A LLK AG + Y L + EQ+G + +T E+EK
Sbjct: 989 MKALDALLFLIGHISSSGKSYTEAWLLKIAGFDQPYNALMKVEQLGQHDNDLIETMEDEK 1048
Query: 658 AA-DDWERKMALVLVSHDFGLLFEALEEGLNSRFAELYSACFESATWLIYMLNFLPDTGI 716
A + W++++A VL +H+ G +F+ALEE L S ++ +C ATWL +ML LPDTG+
Sbjct: 1049 NALNSWQKRIASVLCNHENGSIFKALEECLKSNSLKMAKSCLVLATWLTHMLYTLPDTGV 1108
Query: 717 FGAARVSLLKRFISAFKSANDIDDRALSLLALNSFAQDPQGLRDINIHMKDIMKGLRELR 776
AR SLL+ I+ +S+ +++++ L+ LAL +F DP + ++ K I + LR L+
Sbjct: 1109 RDVARKSLLEEVINVLQSSKNLEEKILATLALKTFISDPSTHEALRVYAKSIYRTLRRLK 1168
Query: 777 KYSPLAFEMVKVLSNGHD-SSADFWNHRELVHVDSSENGKVLSIACFRDKIFSGHSDGTI 835
KYS +A +++KV+ N + W+ +E+V +D S NG+VLS+ ++ SGH+DGTI
Sbjct: 1169 KYSVVAVDIMKVILNLKSVDVTELWSCKEVVELDLSSNGEVLSMVYLNGQVLSGHTDGTI 1228
Query: 836 KVWTGRGSILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDKTARVWSIGNEEIHCVQVH 895
KVW R I +IQ+ EHTKAVT L SG+ LYSGSLDKT RVW+I ++ I C+ V+
Sbjct: 1229 KVWDARKRIPRVIQETHEHTKAVTSLC--SSGDRLYSGSLDKTIRVWTIKSDGIKCIDVY 1286
Query: 896 DIKDQIQNLAVSNSILCFIPQGAGIKVHLRNGKTKLLNSSKYPKCLALVQGKVYCGCQDG 955
DIK+ + LA ++ + C++ QG G+KV + KL+N SKY K LA+ K+YCGC
Sbjct: 1287 DIKEAVHELAANDKLACYVSQGTGVKVFNWSEAPKLINFSKYVKSLAVAGDKLYCGCSGY 1346
Query: 956 AIQEIDLATGTFATIQTGHRKLLGKANPVHALQVHNGLVYTASTSLDGAAVKMWSTSNYN 1015
+IQE+DL+T T + TG RKLLGK +H+LQ+H+ ++ +S+D A K++S S
Sbjct: 1347 SIQEVDLSTYTSNSFFTGTRKLLGKQT-IHSLQIHDDYLFACGSSVDATAGKIFSLSQKM 1405
Query: 1016 MVGSLPTLSEVRAMVVSSELVYLGCKGGTVEIWDQKRQIRIETLQ-TGTSGKVQCMALDD 1074
+VGSL T ++ + ++S+ ++ G K GT+E+W + + R+ +++ G K+ + D
Sbjct: 1406 VVGSLSTGLDIHRIAINSDFIFAGTKFGTIEVWLKDKFTRVASIKMAGGHTKITSLVSDV 1465
Query: 1075 NEEFLVIGTSDGRIQAWGL 1093
+ L +G+SDG+IQ W L
Sbjct: 1466 DGMMLFVGSSDGKIQVWAL 1484
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 14 LLSKMSGSQASELKELERNYEELLDENCRVFASYFKQVLENSNDSG------LIIVTPPS 67
L+ M Q +L++LE+ Y E LDEN +++A Y+ + + + S L I PP
Sbjct: 213 LVLTMRPHQLEKLQKLEQLYGESLDENTKLYAKYYNDCMNSDSSSSKKAVPMLPIAEPPM 272
Query: 68 VVLRKIEKV 76
L ++ +
Sbjct: 273 TPLHELSRT 281
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/980 (43%), Positives = 606/980 (61%), Gaps = 51/980 (5%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYV 219
PPKDFVCPIT IF DPVTLETGQTYER+AIQEW+ GN++CPITRQ LS+ LPKTNYV
Sbjct: 513 PPKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTGNTTCPITRQALSANILPKTNYV 572
Query: 220 LKRLIASWQEQNPG-GLDLSHSE--------PMSKSIV-----------PSN-------- 251
LKRLI SW+EQNP + S+S P +K I PS
Sbjct: 573 LKRLIVSWKEQNPELAQEFSNSNTPRGSSCSPSAKDITMVSSIQRTTDSPSQKYKDDYIR 632
Query: 252 -------------SPNSVISQATIDGTITELKHAITSLCMSEILNESEMAVLQIERCWLE 298
SP SV+SQA ++ I L ITSLC SE L + E AVL+I R W +
Sbjct: 633 QRNNRFTRVSVGASPTSVLSQAAVETIINSLTPYITSLCTSENLQDCEQAVLEIARLWKD 692
Query: 299 ASMELDIQIMLSKPAVINGFVEILFNSVDPRVLEATIFLLSELGSRDKSVIHTLTRVESD 358
+ + I LSKP V++G VEIL S++ VL +I++LSEL D+ V TL V+SD
Sbjct: 693 SKTDPQIHSYLSKPTVVSGLVEILSASLNREVLRRSIYILSELIFSDERVGETLNSVDSD 752
Query: 359 VERIVALFKKGLLEAVVLIDLLRPSTRTLIEMDMMESLMTVIKKKEEDF--LKMCLKPKS 416
+ + L K GL EA +LI LRP L E +++ SL+ VI+ K ED ++ + PK+
Sbjct: 753 FDCLAMLLKNGLAEAALLIYQLRPVFAQLSEHELIPSLIQVIQNKSEDIDDFQLAIDPKA 812
Query: 417 VSVLLLGQMIGDSEESIVSSIANTIVSSKVFESVISSLEAEWAEERIAAVGILLRCMQED 476
++ +L Q++ +E S A++++S+ +++ L+ E R + ILL CMQ +
Sbjct: 813 AAIAILEQILIGGDEYNRSVNASSVISANGIPAIVKYLDK--TEGRRPVISILLCCMQAE 870
Query: 477 GKCRNSIADKAELAPVMESFMAASDGERFEIVCFLSELVKLNRRTFNEQILHIIKDEGTY 536
C++SIA++ EL+PV+E F A +D R V FLSELV+LNRRT + Q L IIKDEG +
Sbjct: 871 KSCKSSIANRIELSPVLELFHAGNDSVRGICVEFLSELVRLNRRTSSNQTLQIIKDEGAF 930
Query: 537 SSMHTLLVYLQTANHDQCPVVAGLLLQLDLLAEPRKMSIYREEAIDTLISCLRNSDYPAA 596
S+MHT LVYLQ A + VA LLLQLDLLAEPRKMSIYREEA++TLI L D+
Sbjct: 931 STMHTFLVYLQMAPMEHQIAVASLLLQLDLLAEPRKMSIYREEAVETLIEALWQKDFSNN 990
Query: 597 QLAAAKTIVSLQGRFTTSGKSLTRAMLLKRAGVGKSYKNLTRTEQIGNICGEDDDTSEEE 656
Q+ A ++ L G T+SGKS T A LLK AG + Y L + EQ+G+ + +T E+E
Sbjct: 991 QMKALDALLFLIGHVTSSGKSYTEAGLLKIAGFDQPYNVLMKAEQLGHSDNDFMETMEDE 1050
Query: 657 K-AADDWERKMALVLVSHDFGLLFEALEEGLNSRFAELYSACFESATWLIYMLNFLPDTG 715
K A W++++A VL +H+ G +F+ALEE L S ++ +C ATWL +ML LPDTG
Sbjct: 1051 KNAMKSWQKRVASVLCNHENGSIFQALEECLKSNSLKMAKSCLVLATWLTHMLFTLPDTG 1110
Query: 716 IFGAARVSLLKRFISAFKSANDIDDRALSLLALNSFAQDPQGLRDINIHMKDIMKGLREL 775
+ AR SLL+ ++ +S+ +++++ L+ LAL SF DP + ++ K I + LR+L
Sbjct: 1111 VRDVARKSLLEALMNVLQSSKNLEEKILASLALKSFISDPTVHEVLRVYAKSIYRILRKL 1170
Query: 776 RKYSPLAFEMVKVLSNGHD-SSADFWNHRELVHVDSSENGKVLSIACFRDKIFSGHSDGT 834
+KYS +A +++K L N + + W+ +E+V +D S NG+VLS+ ++ SGH+DGT
Sbjct: 1171 KKYSTVAADILKALLNLNSVDVTELWSCKEVVELDLSSNGEVLSLHYLNGQVLSGHADGT 1230
Query: 835 IKVWTGRGSILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDKTARVWSIGNEEIHCVQV 894
IKVW R I +IQ+ REH KAVT L S + LYS SLDKT RVW+I + I C+ V
Sbjct: 1231 IKVWDARKRIPRVIQETREHKKAVTSLC--SSVDKLYSSSLDKTIRVWTIKPDGIKCIDV 1288
Query: 895 HDIKDQIQNLAVSNSILCFIPQGAGIKVHLRNGKTKLLNSSKYPKCLALVQGKVYCGCQD 954
+D+K+ + LA + + C++ QG G+KV K +N +KY KCLA+ K+YCGC
Sbjct: 1289 YDVKEAVYELAANAKLACYVTQGTGVKVFNWLDAPKFINFNKYVKCLAVSGDKLYCGCSG 1348
Query: 955 GAIQEIDLATGTFATIQTGHRKLLGKANPVHALQVHNGLVYTASTSLDGAAVKMWSTSNY 1014
+IQE+DL+ T + TG RKLLGK +H+LQ+H+ L++ +S+D A K++S S+
Sbjct: 1349 YSIQEVDLSKYTSTSFFTGTRKLLGKQT-IHSLQIHDDLLFACGSSIDATAGKIFSLSSK 1407
Query: 1015 NMVGSLPTLSEVRAMVVSSELVYLGCKGGTVEIWDQKRQIRIETLQ-TGTSGKVQCMALD 1073
+VGSL T +V + ++S+ ++ G K GT+E+W + + R+ +++ G + K+ +A D
Sbjct: 1408 MVVGSLSTGLDVHRVAINSDFIFAGTKFGTIEVWLKDKFTRVASIKMAGGNTKITSLASD 1467
Query: 1074 DNEEFLVIGTSDGRIQAWGL 1093
+ L +G+SDG+IQ W L
Sbjct: 1468 ADGMMLFVGSSDGKIQVWAL 1487
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 14 LLSKMSGSQASELKELERNYEELLDENCRVFASYFKQVLENSNDSG------LIIVTPPS 67
L+ M +Q +L++LE+ Y E LDEN R++A Y+ + + S L I PP
Sbjct: 213 LVFSMRPNQLEKLQKLEQLYGESLDENTRLYAKYYNDCMNPDSTSSKKVVPMLPIAEPPM 272
Query: 68 VVLRKIEK 75
L ++ +
Sbjct: 273 TPLHELSR 280
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus GN=LIN
PE=1 SV=1
Length = 1485
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/979 (42%), Positives = 590/979 (60%), Gaps = 50/979 (5%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYV 219
PPKDFVCPIT IF DPVTLETGQTYER+AIQEW+ GN++CPITRQ LS++ LPKTNYV
Sbjct: 511 PPKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSASILPKTNYV 570
Query: 220 LKRLIASWQEQNPG-GLDLSH-SEPMSKSIVPS--------------------------- 250
LKRLI SW+EQNP + S+ + P S PS
Sbjct: 571 LKRLITSWKEQNPELAQEFSNVNTPRGSSCSPSAKDIPMLSTRQRTTDSPNHKNKDYARQ 630
Query: 251 -----------NSPNSVISQATIDGTITELKHAITSLCMSEILNESEMAVLQIERCWLEA 299
SP SV+SQA ++ + LK I+SLC SE L E E AVL+I R ++
Sbjct: 631 RSNRFMPAAITTSPTSVLSQAAVETIVNSLKPYISSLCTSENLPECEEAVLKIARLLKDS 690
Query: 300 SMELDIQIMLSKPAVINGFVEILFNSVDPRVLEATIFLLSELGSRDKSVIHTLTRVESDV 359
I LSKP +ING VEIL S + VL +I++LSEL D SV TL V+SD
Sbjct: 691 KTNPQIHSYLSKPTIINGLVEILSASRNREVLRTSIYILSELIFTDDSVAETLNSVDSDF 750
Query: 360 ERIVALFKKGLLEAVVLIDLLRPSTRTLIEMDMMESLMTVIKKKEE--DFLKMCLKPKSV 417
+ + L K GL EA +LI LRP L +++ SL+ VI+ K E D ++ + PK
Sbjct: 751 DCLATLLKNGLAEAALLIYQLRPVFAQLSAHELIPSLVDVIQNKNEELDDFQLVIDPKDA 810
Query: 418 SVLLLGQMIGDSEESIVSSIANTIVSSKVFESVISSLEAEWAEERIAAVGILLRCMQEDG 477
++ +L Q + +E S A++++S+ +++ LE E R + V +LL CMQ +
Sbjct: 811 AIAILEQTLMGGDEYSRSLNASSVISANGIPTLVKYLER--MEGRRSVVSVLLCCMQAEK 868
Query: 478 KCRNSIADKAELAPVMESFMAASDGERFEIVCFLSELVKLNRRTFNEQILHIIKDEGTYS 537
C+N IA++ EL+PV+E F + +D R V FLSELV+LNRRT Q+LH IKDEG +S
Sbjct: 869 SCKNLIANRIELSPVLELFHSGNDSVRGTCVEFLSELVQLNRRTSCNQLLHTIKDEGAFS 928
Query: 538 SMHTLLVYLQTANHDQCPVVAGLLLQLDLLAEPRKMSIYREEAIDTLISCLRNSDYPAAQ 597
+MHT LVYLQ A + VA LLLQLDLLAEPRKMSIYREEA++TLI L D+ Q
Sbjct: 929 TMHTFLVYLQMAPMEHQLAVASLLLQLDLLAEPRKMSIYREEAVETLIEALWQKDFSNTQ 988
Query: 598 LAAAKTIVSLQGRFTTSGKSLTRAMLLKRAGVGKSYKNLTRTEQIGNICGEDDDTSEEEK 657
+ A ++ L G ++SGKS T A LLK AG + Y L + EQ+G + +T E+EK
Sbjct: 989 MKALDALLFLIGHISSSGKSYTEAWLLKIAGFDQPYNALMKVEQLGQHDNDLIETMEDEK 1048
Query: 658 AA-DDWERKMALVLVSHDFGLLFEALEEGLNSRFAELYSACFESATWLIYMLNFLPDTGI 716
A + W++++A VL +H+ G +F+ALEE L S ++ +C ATWL ML LPDTG+
Sbjct: 1049 NALNSWQKRIASVLCNHENGSIFKALEECLKSNSLKMAKSCLVLATWLTRMLYTLPDTGV 1108
Query: 717 FGAARVSLLKRFISAFKSANDIDDRALSLLALNSFAQDPQGLRDINIHMKDIMKGLRELR 776
AR SLL+ I S+ ++D L L+L F DP + ++ K I + LR+L+
Sbjct: 1109 RDVARKSLLEEVIKVLHSSKSLEDMILVTLSLYPFISDPTVHEVLRVYAKSIYRILRKLK 1168
Query: 777 KYSPLAFEMVKVLSNGHD-SSADFWNHRELVHVDSSENGKVLSIACFRDKIFSGHSDGTI 835
KYS +A +++K L N + + W+ +E+V +D S NG+VLS+ ++ SG DGT
Sbjct: 1169 KYSTVAADILKALLNLNSVDVTELWSCKEVVELDLSSNGEVLSLHYLNGQVLSGLMDGTS 1228
Query: 836 KVWTGRGSILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDKTARVWSIGNEEIHCVQVH 895
KV R I +IQ+ EHTKAVT L SG+ LYS SLDKT RVW+I ++ I C+ V+
Sbjct: 1229 KVCDARKRIPRVIQETHEHTKAVTSLC--SSGDRLYSASLDKTIRVWTIKSDGIKCIDVY 1286
Query: 896 DIKDQIQNLAVSNSILCFIPQGAGIKVHLRNGKTKLLNSSKYPKCLALVQGKVYCGCQDG 955
DIK+ + LA ++ + C++ QG G+KV + KL+N SKY K LA+ K+YCGC
Sbjct: 1287 DIKEAVHELAANDKLACYVSQGTGVKVFNWSEAPKLINFSKYVKSLAVAGDKLYCGCSGY 1346
Query: 956 AIQEIDLATGTFATIQTGHRKLLGKANPVHALQVHNGLVYTASTSLDGAAVKMWSTSNYN 1015
+IQE+DL+T T + TG RKLLGK +H+LQ+H+ ++ +S+D A K++S S
Sbjct: 1347 SIQEVDLSTYTSNSFFTGTRKLLGKQT-IHSLQIHDDYLFACVSSVDATAGKIFSLSQKM 1405
Query: 1016 MVGSLPTLSEVRAMVVSSELVYLGCKGGTVEIWDQKRQIRIETLQ-TGTSGKVQCMALDD 1074
+VGSL T ++ + ++S+ ++ G K GT+E+W + + R+ ++Q G K+ + D
Sbjct: 1406 VVGSLSTGLDIHRIAINSDFIFAGTKFGTIEVWLKDKFTRVASIQMAGGHTKITSLVSDV 1465
Query: 1075 NEEFLVIGTSDGRIQAWGL 1093
+ L +G+SDG+IQ W L
Sbjct: 1466 DGMMLFVGSSDGKIQVWAL 1484
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 14 LLSKMSGSQASELKELERNYEELLDENCRVFASYFKQVLENSNDSG------LIIVTPPS 67
L+ M Q +L++LE+ Y E LDEN +++A Y+ + + + S L I PP
Sbjct: 213 LVLTMRPHQLEKLQKLEQLYGESLDENTKLYAKYYNDCMNSDSSSSKKAVPMLPIAEPPM 272
Query: 68 VVLRKIEKV 76
L ++ +
Sbjct: 273 TPLHELSRT 281
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 68/114 (59%), Gaps = 12/114 (10%)
Query: 159 TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNY 218
T P +F CPI+ + DPV + TGQTYER I++WI G+ +CP T+QK+S++ L NY
Sbjct: 272 TIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSAL-TPNY 330
Query: 219 VLKRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVIS---QATIDGTITEL 269
VL+ LI+ W E N G+ EP +S P N P S +A ID +++L
Sbjct: 331 VLRSLISQWCETN--GM-----EPPKRSTQP-NKPTPACSSSERANIDALLSKL 376
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 68/114 (59%), Gaps = 12/114 (10%)
Query: 159 TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNY 218
T P +F CPI+ + DPV + TGQTYER I++WI G+ +CP T+QK+S++ L NY
Sbjct: 272 TIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSAL-TPNY 330
Query: 219 VLKRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVIS---QATIDGTITEL 269
VL+ LI+ W E N G+ EP +S P N P S +A ID +++L
Sbjct: 331 VLRSLISQWCETN--GM-----EPPKRSTQP-NKPTPACSSSERANIDALLSKL 376
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P DF CPI+ + DPV + +GQTYER I++WIE G+S+CP T+Q L+ST L NYVL
Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTL-TPNYVL 315
Query: 221 KRLIASWQEQNPGGLDLSHSEPMS 244
+ LIA W E N D+ +P S
Sbjct: 316 RSLIAQWCEAN----DIEPPKPPS 335
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 142 DHLIMADADNPPGIGKHTPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSC 201
D ++ + D K T P DF+CP++ + DPV + TGQTYER IQ WI+ GN +C
Sbjct: 223 DKMVNKNTDESKKSDKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTC 282
Query: 202 PITRQKLSSTKLPKTNYVLKRLIASW-QEQN---PGG 234
P T+QKL + L NYVL+ LI+ W E N P G
Sbjct: 283 PKTQQKLENFTLTP-NYVLRSLISRWCAEHNIEQPAG 318
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Query: 159 TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNY 218
T P+DF+CPI+ + DP + TGQTYER IQ WI+ GN SCP T+QKL + L NY
Sbjct: 242 TIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTL-TPNY 300
Query: 219 VLKRLIASW----QEQNPGG 234
VL+ LI+ W + PGG
Sbjct: 301 VLRSLISQWCTKHNIEQPGG 320
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 108/219 (49%), Gaps = 33/219 (15%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P +F CPI+ + DPV + +GQTYER IQ+W++ G+ +CP T+Q LS T L N+VL
Sbjct: 229 PDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSL-TPNFVL 287
Query: 221 KRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVISQATIDGTITELKHAITSLCMSE 280
K LI+ W E N G++L P N NS +A ++ HA M+
Sbjct: 288 KSLISQWCEAN--GIEL-----------PKNKQNSRDKKA---AKSSDYDHAGLVSLMNR 331
Query: 281 IL----NESEMAVLQIERCWLEASMELDIQIMLSKPAVINGFVEILFNSVDPRVLEATIF 336
+ +E A +I L A ++ +I +++ I V +L +S DPR E +
Sbjct: 332 LRSGNQDEQRAAAGEIR---LLAKRNVNNRICIAEAGAIPLLVNLLSSS-DPRTQEHAVT 387
Query: 337 LLSELG--SRDKSVIHTLTRVESD-VERIVALFKKGLLE 372
L L +K+ I V+S + +IV + K G +E
Sbjct: 388 ALLNLSIHENNKASI-----VDSHAIPKIVEVLKTGSME 421
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 23/208 (11%)
Query: 142 DHLIMADADNPPGIG-----KH-TP--PKDFVCPITTHIFDDPVTLETGQTYERRAIQEW 193
D + M +D P G +H +P P+ F CPI+ + DPV + TGQTYER +IQ+W
Sbjct: 222 DFVTMESSDPDPSTGSRIVSRHRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKW 281
Query: 194 IERGNSSCPITRQKLSSTKLPKTNYVLKRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSP 253
++ G+ +CP +++ L L NYVLK LIA W E N G++L ++ ++ S
Sbjct: 282 LDAGHKTCPKSQETLLHAGL-TPNYVLKSLIALWCESN--GIELPQNQGSCRTTKIGGSS 338
Query: 254 NSVISQATIDGTITELKHAITSLCMSEILNESEMAVLQIERCWLEASMELDIQIMLSKPA 313
+S + + + +L + T E + A R L A +D ++ +++
Sbjct: 339 SSDCDRTFVLSLLEKLANGTT---------EQQRAAAGELR--LLAKRNVDNRVCIAEAG 387
Query: 314 VINGFVEILFNSVDPRVLEATIFLLSEL 341
I VE+L +S DPR E ++ L L
Sbjct: 388 AIPLLVELL-SSPDPRTQEHSVTALLNL 414
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 12/104 (11%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYV 219
PP++ CPI+ + DPV + +GQTYER I++W G++SCP T+Q+L L NY
Sbjct: 275 PPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSL-TPNYC 333
Query: 220 LKRLIASWQEQN--------PGGLDLSHSEPMSKSIVPSNSPNS 255
+K LIASW EQN P LDL++ ++ S SPNS
Sbjct: 334 VKGLIASWCEQNGITVPTGPPESLDLNY---WRLAMSDSESPNS 374
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P +F+CPIT I DPV + TGQTYE+ +IQ+W + G+ +CP TRQ+L L N+ L
Sbjct: 291 PHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLA-PNFAL 349
Query: 221 KRLIASWQEQN 231
K LI W E+N
Sbjct: 350 KNLIMQWCEKN 360
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYV 219
PP++F CPI+ + DPV + +GQTYER I++W+E G+ +CP T++ L+S + NYV
Sbjct: 256 PPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIM-TPNYV 314
Query: 220 LKRLIASWQEQN 231
L+ LIA W E N
Sbjct: 315 LRSLIAQWCESN 326
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 9/88 (10%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYV 219
PP++ CPI+ + DPV + +GQTYER I++W G+++CP T Q+LS L NY
Sbjct: 279 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCL-TPNYC 337
Query: 220 LKRLIASWQEQN--------PGGLDLSH 239
+K LI+SW EQN P LDL++
Sbjct: 338 VKALISSWCEQNGVQVPDGPPESLDLNY 365
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 8/108 (7%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSS-TKLPKTNYV 219
P F CPI+ + DPVT+ TGQTY+R +I WI GN++CP+TR LS T +P N+
Sbjct: 15 PYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIP--NHT 72
Query: 220 LKRLIASWQEQN-PGGLDLSHSEPMSKSIVPSNSPNSVISQAT-IDGT 265
L+RLI W N G++ P K S S++SQA+ I GT
Sbjct: 73 LRRLIQEWCVANRSNGVE---RIPTPKQPADPISVRSLLSQASAITGT 117
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 159 TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNY 218
T PKDFVCPI+ + DPV + TGQTY+R +I WIE G+ +CP T Q L +++ N
Sbjct: 304 TVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVP-NR 362
Query: 219 VLKRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVISQATIDGTITELKHAITSLCM 278
LK LI W + +S ++SPN + A E A S+ +
Sbjct: 363 ALKNLIVQW----------CTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILI 412
Query: 279 SEILNESEMA 288
+ + S+ A
Sbjct: 413 KYLADGSQAA 422
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYV 219
PP++ CPI+ + DPV + +GQTYER I++W G+++CP T+Q+L L N V
Sbjct: 272 PPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCV 331
Query: 220 LKRLIASWQEQNPGGLDLSHSEPMSKSI 247
K LIASW EQN G + P S+ +
Sbjct: 332 -KGLIASWCEQN--GTQIPSGPPESQDL 356
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P DF C ++ + DPV + +GQT+ER IQ+WI+ G CP TRQ LS T L N+++
Sbjct: 241 PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTL-TPNFIV 299
Query: 221 KRLIASWQEQN----PGGLDLSH-SEP---MSKSIVPSNSPN 254
+ +ASW E N P L+L H SEP + +S+ S+S N
Sbjct: 300 RAFLASWCETNNVYPPDPLELIHSSEPFPLLVESVRASSSEN 341
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 65/113 (57%), Gaps = 10/113 (8%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P DF CPI+ I DPV L++G T++R +IQ+WI+ GN +CPIT+ LS T N+ L
Sbjct: 6 PNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHAL 65
Query: 221 KRLI-----ASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVISQATIDGTITE 268
+ LI S +E + HS S++++ ++++SQ++ + + E
Sbjct: 66 RSLILNFAHVSLKESSRPRTQQEHSHSQSQALI-----STLVSQSSSNASKLE 113
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 163 DFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVLKR 222
DF CP++ + DPV + +GQTYE+ I+ WI+ G CP TRQ L+ T L NY +K
Sbjct: 233 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTL-IPNYTVKA 291
Query: 223 LIASWQEQN 231
LIA+W E N
Sbjct: 292 LIANWCETN 300
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 13/105 (12%)
Query: 126 IRKQKQPIFVESSCSPD---HLIMADADNPPGIGKHTPPKDFVCPITTHIFDDPVTLETG 182
+R K ++ S+ +PD H ++DA+ P DF CPIT + DPV + TG
Sbjct: 246 VRYSKCVLYGPSTPAPDFRRHQSLSDANIP---------ADFRCPITLELMRDPVVVATG 296
Query: 183 QTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVLKRLIASW 227
QTY+R +I WI+ G+++CP T Q L T L N LK LI W
Sbjct: 297 QTYDRESIDLWIQSGHNTCPKTGQVLKHTSL-VPNRALKNLIVLW 340
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 159 TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNY 218
T P+ F C ++ + DPV + +G T+ER IQ+W + GN SCPI+++KL L K N
Sbjct: 218 TLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTL-KPNV 276
Query: 219 VLKRLIASWQEQNPGGLDLSHSEPMSKSIVPSNSPNSVISQATIDGTI 266
LK I+ W +N GLD+ +P K + SNS + +S A+ ++
Sbjct: 277 ELKSQISEWCAKN--GLDV--QDPARKHVKASNSIDFSVSIASFGSSL 320
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P F CP++T + DPV + +GQT++R +I++W++ G + CP TRQ L+ +L NY +
Sbjct: 239 PPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIP-NYTV 297
Query: 221 KRLIASWQEQN 231
K +IASW E N
Sbjct: 298 KAMIASWLEAN 308
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
PK+F CPI+ + DPV TGQTY+R +I +WIE G+S+CP + Q L+ +L N L
Sbjct: 298 PKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRL-VPNRAL 356
Query: 221 KRLIASW 227
+ LI+ W
Sbjct: 357 RSLISQW 363
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 9/109 (8%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERG-NSSCPITRQKLSS-TKLPKTNY 218
P F CPI+ + DPVT+ TGQTY+R +I+ W+ G N++CP+TR LS T +P N+
Sbjct: 15 PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIP--NH 72
Query: 219 VLKRLIASWQEQN-PGGLDLSHSEPMSKSIVPSNSPNSVISQAT-IDGT 265
L+RLI W N G++ P K S +++SQA+ I GT
Sbjct: 73 TLRRLIQEWCVANRSNGVE---RIPTPKQPADPTSVRALLSQASAITGT 118
>sp|Q9CAA7|PUB42_ARATH Putative U-box domain-containing protein 42 OS=Arabidopsis thaliana
GN=PUB42 PE=2 SV=1
Length = 1033
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIER-GNS---SCPITRQKLSSTKLPK 215
P + F+CP+T I +DPVT ETG T ER+A+ EW + GNS +CP+T QKL +T+L
Sbjct: 246 PYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKL-TTEL-S 303
Query: 216 TNYVLKRLIASWQEQNPGG 234
N VLK +I W+ +N
Sbjct: 304 ANVVLKTIIQEWKVRNEAA 322
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P++F CP++ + DPV L +GQTY++ IQ+W+ GN +CP T+Q L T L N ++
Sbjct: 75 PEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALT-PNLLI 133
Query: 221 KRLIASWQEQN 231
+ +I+ W ++N
Sbjct: 134 REMISKWCKKN 144
>sp|P42527|MHCKA_DICDI Myosin heavy chain kinase A OS=Dictyostelium discoideum GN=mhkA PE=1
SV=2
Length = 1146
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 114/275 (41%), Gaps = 51/275 (18%)
Query: 818 SIACFRDKIFSGHSDGTIKVWTGRGSILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDK 877
SIAC + IF+ D TIKV R I+ + HT V ++ + + L+S S DK
Sbjct: 917 SIACNSNYIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVN--CVVANEKYLFSCSYDK 974
Query: 878 TARVWSIGNEEIHCVQVHDIKDQIQNLAVSNSILCFIPQGAGIKVHLRNGKTKLLNSSKY 937
T +VW +L+ I F +G VH +KY
Sbjct: 975 TIKVW--------------------DLSTFKEIKSF--EG----VH-----------TKY 997
Query: 938 PKCLALVQGKVYCGCQDGAIQEIDLATGTFATIQTGHRKLLGKANPVHALQVHNGLVYTA 997
K LAL ++ G D I D T + GH + L +H Y
Sbjct: 998 IKTLALSGRYLFSGGNDQIIYVWDTETLSMLFNMQGHEDWV--------LSLHCTASYLF 1049
Query: 998 STSLDGAAVKMWSTSNYNMVGSLPT-LSEVRAMVVSSELVYLGCKGGTVEIWDQKRQIRI 1056
STS D +K+W SN++ + +L + V + VV +Y G + ++++WD +
Sbjct: 1050 STSKDNV-IKIWDLSNFSCIDTLKGHWNSVSSCVVKDRYLYSGSEDNSIKVWDLDTLECV 1108
Query: 1057 ETLQTGTSGKVQCMALDDNEEFLVIGTSDGRIQAW 1091
T+ S V+C+ + +N+ ++ DG I+ W
Sbjct: 1109 YTIPKSHSLGVKCLMVFNNQ--IISAAFDGSIKVW 1141
Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 47/215 (21%)
Query: 814 GKVLSIACFRDKIFSGHSDGTIKVWTGRGSILHLIQQIRE----HTKAVTGLAILQSGEM 869
G+V + +FS D TIKVW L ++I+ HTK + LA+ SG
Sbjct: 955 GEVNCVVANEKYLFSCSYDKTIKVWD-----LSTFKEIKSFEGVHTKYIKTLAL--SGRY 1007
Query: 870 LYSGSLDKTARVWSIGN-EEIHCVQVHDIKDQIQNLAVSNSILCFIPQGAGIKVHLRNGK 928
L+SG D+ VW + +Q H+ D + +L + S L + IK+
Sbjct: 1008 LFSGGNDQIIYVWDTETLSMLFNMQGHE--DWVLSLHCTASYLFSTSKDNVIKIW----- 1060
Query: 929 TKLLNSSKYPKCLALVQGK-------------VYCGCQDGAIQEIDLAT-GTFATIQTGH 974
L N S C+ ++G +Y G +D +I+ DL T TI H
Sbjct: 1061 -DLSNFS----CIDTLKGHWNSVSSCVVKDRYLYSGSEDNSIKVWDLDTLECVYTIPKSH 1115
Query: 975 RKLLGKANPVHALQVHNGLVYTASTSLDGAAVKMW 1009
LG V L V N + +A + DG ++K+W
Sbjct: 1116 S--LG----VKCLMVFNNQIISA--AFDG-SIKVW 1141
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERG-NSSCPITRQKLSSTKLPKTNYV 219
P F+CPI+ I DPV + TG TY+R +I++W+ G +SCP+T+Q ++ T L N+
Sbjct: 8 PSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDL-TPNHT 66
Query: 220 LKRLIASW 227
L+RLI SW
Sbjct: 67 LRRLIQSW 74
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
Query: 118 SLEPRQRQIRKQKQPIFVESSCSPDHLIMADADNPPGIGKHTPPKDFVCPITTHIFDDPV 177
SL R+R K+ I +SCS + I T P F CPI+ + DPV
Sbjct: 4 SLRVRRRGGSVSKKEIIPVTSCSEEVEI-------------TIPSQFQCPISYELMKDPV 50
Query: 178 TLETGQTYERRAIQEWIERGNSSCPITRQKLSS-TKLPKTNYVLKRLIASWQEQNPGG 234
+ +G TY+R I++W E G +CP+T L+S ++P N+ ++R+I W + GG
Sbjct: 51 IIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIP--NHTIRRMIQGWCGSSLGG 106
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 163 DFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVLKR 222
D CPI+ I DPV LE+G TY+R +I +W GN +CP T + L ST L N+ +K+
Sbjct: 281 DLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVD-NFSVKQ 339
Query: 223 LIASWQEQN 231
+I S+ +QN
Sbjct: 340 VIQSYSKQN 348
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERG-NSSCPITRQKLSSTKLPKTNYV 219
P F+CPI+ I DPV + TG TY+R +I++W+ G +SCP+T+Q ++ L N+
Sbjct: 13 PPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADL-TPNHT 71
Query: 220 LKRLIASWQEQN 231
L+RLI SW N
Sbjct: 72 LRRLIQSWCTLN 83
>sp|Q5SRY7|FBW1B_MOUSE F-box/WD repeat-containing protein 11 OS=Mus musculus GN=Fbxw11 PE=1
SV=1
Length = 542
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 119/287 (41%), Gaps = 57/287 (19%)
Query: 811 SENGKVLSIACFR---DKIFSGHSDGTIKVWTGRGSILHLIQQIREHTKAVTGLAILQSG 867
SEN K + C + DKI SG D +IK+W S L ++ + HT +V L +
Sbjct: 237 SENSK--GVYCLQYDDDKIISGLRDNSIKIWDK--SSLECLKVLTGHTGSV--LCLQYDE 290
Query: 868 EMLYSGSLDKTARVWSIGNEEIHCVQVHDIKDQIQNLAVSNSILCFIPQGAGIKVHLRNG 927
++ +GS D T RVW + E+ +H N AV +HLR
Sbjct: 291 RVIVTGSSDSTVRVWDVNTGEVLNTLIH------HNEAV---------------LHLRFS 329
Query: 928 KTKLLNSSKYPKCLALVQGKVYCGCQDGAIQEIDLATGTFATIQTGHRKLLGKANPVHAL 987
++ SK D +I D+A+ T T++ R L+G V+ +
Sbjct: 330 NGLMVTCSK-----------------DRSIAVWDMASATDITLR---RVLVGHRAAVNVV 369
Query: 988 QVHNGLVYTASTSLDGAAVKMWSTSNYNMVGSLPTLSE-VRAMVVSSELVYLGCKGGTVE 1046
+ + +AS +K+WSTS V +L + + LV G T+
Sbjct: 370 DFDDKYIVSASGD---RTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 426
Query: 1047 IWDQKRQIRIETLQTGTSGKVQCMALDDNEEFLVIGTSDGRIQAWGL 1093
+WD + + L+ G V+C+ D+ +V G DG+I+ W L
Sbjct: 427 LWDIECGACLRVLE-GHEELVRCIRFDNKR--IVSGAYDGKIKVWDL 470
Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 93/243 (38%), Gaps = 34/243 (13%)
Query: 781 LAFEMVKVLSNGHDSSADFWNHR--ELVHVDSSENGKVLSIACFRDKIFSGHSDGTIKVW 838
L ++ K++S D+S W+ E + V + G VL + I +G SD T++VW
Sbjct: 246 LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 305
Query: 839 -TGRGSILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDKTARVWSIGNE---------- 887
G +L+ + H +AV L S ++ + S D++ VW + +
Sbjct: 306 DVNTGEVLNTLIH---HNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLV 360
Query: 888 -EIHCVQVHDIKDQIQNLAVSNSILCFIPQGAGIKVHLRNGKTKLLNSSKYPKCLALVQG 946
V V D D+ A + + V NG + + CL
Sbjct: 361 GHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI------ACLQYRDR 414
Query: 947 KVYCGCQDGAIQEIDLATGTFATIQTGHRKLLGKANPVHALQVHNGLVYTASTSLDGAAV 1006
V G D I+ D+ G + GH +L V ++ N + S + DG +
Sbjct: 415 LVVSGSSDNTIRLWDIECGACLRVLEGHEEL------VRCIRFDNKRI--VSGAYDG-KI 465
Query: 1007 KMW 1009
K+W
Sbjct: 466 KVW 468
Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 1039 GCKGGTVEIWDQKRQIRIETLQTGTSGKVQCMALDDNEEFLVIGTSDGRIQAWGLS 1094
G + +++IWD K + + TG +G V C+ D E +V G+SD ++ W ++
Sbjct: 256 GLRDNSIKIWD-KSSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWDVN 308
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P F+CPI+ DPVTL TGQTYER I +W G+ +CP T Q+L L N L
Sbjct: 61 PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWD-DLVTPNKTL 119
Query: 221 KRLIASWQEQN 231
+LI +W Q
Sbjct: 120 HQLIYTWFSQK 130
>sp|Q9SFX2|PUB43_ARATH U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43
PE=2 SV=1
Length = 811
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 164 FVCPITTHIFDDPVTLETGQTYERRAIQEWIE--RGNS---SCPITRQKLSSTKLPKTNY 218
F+CP+T + +PVTLE GQT+ER AI++W + R N SCPIT ++LS T L +
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPS-I 87
Query: 219 VLKRLIASWQEQN 231
L+ I W+ +N
Sbjct: 88 ALRNTIEEWRARN 100
>sp|P90648|MHCKB_DICDI Myosin heavy chain kinase B OS=Dictyostelium discoideum GN=mhkB PE=2
SV=1
Length = 732
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 129/285 (45%), Gaps = 20/285 (7%)
Query: 816 VLSIACFRDKI-FSGHSDGTIKVWTGRGSILHLIQQIREHTKAVTGLAILQSGEMLYSGS 874
V S C D + F+G SD +I+V+ + + +Q ++ H V +I + + L+SGS
Sbjct: 462 VTSHLCICDNLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVE--SICYNDQYLFSGS 519
Query: 875 LDKTARVWSIGNEEIHCVQVHDIKDQ-IQNLAVSNSILCFIPQGAGIKV---HLRNGKTK 930
D + +VW + +++ C+ + D+ + + +++ L IKV K
Sbjct: 520 SDHSIKVWDL--KKLRCIFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYT 577
Query: 931 LLNSSKYPKCLALVQGKVYCGCQDGAIQEIDLATGTFATIQTGHRKLLGKANPVHALQVH 990
L + ++ K L + ++ G D I+ DL T GH K V + +
Sbjct: 578 LESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKW------VTTICIL 631
Query: 991 NGLVYTASTSLDGAAVKMWSTSNYNMVGSLPTLSE-VRAMVVSSELVYLGCKGGTVEIWD 1049
+Y+ S +++W+ + +L V MV+ +L++ T++IWD
Sbjct: 632 GTNLYSGSYD---KTIRVWNLKSLECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIWD 688
Query: 1050 QKRQIRIETLQTGTSGKVQCMALDDNEEFLVIGTSDGRIQAWGLS 1094
+ +R T G + VQC+A+ ++++ ++ + D I+ WG +
Sbjct: 689 LE-TLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVWGWN 732
>sp|Q9LM76|PUB44_ARATH U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44
PE=1 SV=1
Length = 801
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 164 FVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNS-----SCPITRQKLSSTKLPKTNY 218
F+CP+T + DPVTLE G+T+ER AI++W + SCP+T Q+L+ST + +
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDV-SASI 85
Query: 219 VLKRLIASWQEQNPGG-LDLS 238
L+ I W+ +N LD++
Sbjct: 86 ALRNTIEEWRSRNDAAKLDIA 106
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKL-SSTKLPKTNYV 219
P F+CPI+ DPVTL TGQTYER I +W G+ +CP T Q+L T P N
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTP--NKT 122
Query: 220 LKRLIASWQEQN 231
L LI +W Q
Sbjct: 123 LHHLIYTWFSQK 134
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 159 TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSS-TKLPKTN 217
T P +F CPI+ + DPV + TG TY+R +I+ WI GN +CP+T L++ ++P N
Sbjct: 30 TIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIP--N 87
Query: 218 YVLKRLIASW 227
+ ++++I W
Sbjct: 88 HTIRKMIQGW 97
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 159 TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNY 218
T P F CPI+ + PV+L TG TY+R +IQ W++ GN++CP T Q L + + N
Sbjct: 10 TVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVP-NL 68
Query: 219 VLKRLIASWQE 229
L RLI W +
Sbjct: 69 TLHRLIDHWSD 79
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 159 TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNY 218
T P F CPI+ + PV+L TG TY+R +IQ W++ GN++CP T Q L TK N
Sbjct: 11 TVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQ-LLKTKDFVPNL 69
Query: 219 VLKRLIASWQE 229
L+RLI W +
Sbjct: 70 TLQRLINIWSD 80
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
P F+CPI+ I DPVT +G TY+R+ I +W+E+ SCP+T+Q L N++L
Sbjct: 11 PNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKV-PSCPVTKQPLPLDSDLTPNHML 69
Query: 221 KRLIASWQEQN 231
+RLI W +N
Sbjct: 70 RRLIQHWCVEN 80
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 162 KDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKL 213
+D +CPI+ I DPV +ETG TY+R +I +W GN +CPIT + L+ST+L
Sbjct: 290 EDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTEL 341
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 159 TPPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTK-LPKTN 217
T P F CPI+ + PV+L TG TY+R +IQ W++ GN++CP T Q L + +P N
Sbjct: 9 TVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIP--N 66
Query: 218 YVLKRLIASWQE 229
L+RLI W +
Sbjct: 67 RTLQRLIEIWSD 78
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 129/328 (39%), Gaps = 43/328 (13%)
Query: 787 KVLSNGHDSSADFWNHRELVHVDSSEN--GKVLSIACFRD--KIFSGHSDGTIKVW-TGR 841
+V S D + W+ + E VLS+A D ++ SG D TIK+W T
Sbjct: 939 RVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTAS 998
Query: 842 GSILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDKTARVWSIGNEEIHCVQVHDIKDQI 901
G+ Q + H +V +A G+ + SGS DKT ++W + C Q +
Sbjct: 999 GT---CTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGT--CTQT------L 1047
Query: 902 QNLAVSNSILCFIPQGAGIKVHLRNGKTKLLNSSKYPKCLALVQG--------------- 946
+ + F P G + + K+ ++ C ++G
Sbjct: 1048 EGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVS-GTCTQTLEGHGDSVWSVAFSPDGQ 1106
Query: 947 KVYCGCQDGAIQEIDLATGTFATIQTGHRKLLGKANPVHALQVHNGLVYTASTSLDGAAV 1006
+V G DG I+ D A+GT GH VH++ AS S+DG +
Sbjct: 1107 RVASGSIDGTIKIWDAASGTCTQTLEGH------GGWVHSVAFSPDGQRVASGSIDGT-I 1159
Query: 1007 KMWSTSNYNMVGSLPT---LSEVRAMVVSSELVYLGCKGGTVEIWDQKRQIRIETLQTGT 1063
K+W ++ +L + A + V G T++IWD +TL+ G
Sbjct: 1160 KIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLE-GH 1218
Query: 1064 SGKVQCMALDDNEEFLVIGTSDGRIQAW 1091
G VQ +A + + + G+SD I+ W
Sbjct: 1219 GGWVQSVAFSPDGQRVASGSSDNTIKIW 1246
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 128/328 (39%), Gaps = 43/328 (13%)
Query: 787 KVLSNGHDSSADFWNHRELVHVDSSEN--GKVLSIACFRD--KIFSGHSDGTIKVWTGRG 842
+V S D + W+ + E G+V S+A D ++ SG D TIK+W
Sbjct: 897 RVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAAS 956
Query: 843 SILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDKTARVWSIGNEEIHCVQVHDIKDQIQ 902
Q + H +V +A G+ + SGS DKT ++W + C Q ++
Sbjct: 957 GTC--TQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGT--CTQT------LE 1006
Query: 903 NLAVSNSILCFIPQGAGIKVHLRNGKTKLLNSSKYPKCLALVQG---------------K 947
S + F P G + + K+ +++ C ++G +
Sbjct: 1007 GHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTAS-GTCTQTLEGHGGWVQSVVFSPDGQR 1065
Query: 948 VYCGCQDGAIQEIDLATGTFATIQTGHRKLLGKANPVHALQVHNGLVYTASTSLDGAAVK 1007
V G D I+ D +GT GH + V ++ AS S+DG +K
Sbjct: 1066 VASGSDDHTIKIWDAVSGTCTQTLEGH------GDSVWSVAFSPDGQRVASGSIDG-TIK 1118
Query: 1008 MW----STSNYNMVGSLPTLSEVRAMVVSSELVYLGCKGGTVEIWDQKRQIRIETLQTGT 1063
+W T + G + V A + V G GT++IWD +TL+ G
Sbjct: 1119 IWDAASGTCTQTLEGHGGWVHSV-AFSPDGQRVASGSIDGTIKIWDAASGTCTQTLE-GH 1176
Query: 1064 SGKVQCMALDDNEEFLVIGTSDGRIQAW 1091
G VQ +A + + + G+SD I+ W
Sbjct: 1177 GGWVQSVAFSPDGQRVASGSSDKTIKIW 1204
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 129/336 (38%), Gaps = 66/336 (19%)
Query: 787 KVLSNGHDSSADFWNHRELVHVDSSEN--GKVLSIACFRD--KIFSGHSDGTIKVW-TGR 841
+V S D + W+ + E G V S+A D ++ SG D TIK+W T
Sbjct: 981 RVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTAS 1040
Query: 842 GSILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDKTARVW-SIGNEEIHCVQVHDIKDQ 900
G+ Q + H V + G+ + SGS D T ++W ++ ++ H D
Sbjct: 1041 GT---CTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGH--GDS 1095
Query: 901 IQNLAVSNSILCFIPQGAGIKVHLRNGKTKLLNSSKYPKCLALVQG-------------- 946
+ ++A F P G + +G K+ +++ C ++G
Sbjct: 1096 VWSVA-------FSPDGQRVASGSIDGTIKIWDAAS-GTCTQTLEGHGGWVHSVAFSPDG 1147
Query: 947 -KVYCGCQDGAIQEIDLATGTFATIQTGHRKLLGKANPVHALQVHNGLVYTASTSLDG-- 1003
+V G DG I+ D A+GT L+ H G V + + S DG
Sbjct: 1148 QRVASGSIDGTIKIWDAASGTC----------------TQTLEGHGGWVQSVAFSPDGQR 1191
Query: 1004 -------AAVKMWSTSNYNMVGSLPT---LSEVRAMVVSSELVYLGCKGGTVEIWDQKRQ 1053
+K+W T++ +L + A + V G T++IWD
Sbjct: 1192 VASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTASG 1251
Query: 1054 IRIETLQTGTSGKVQCMALDDNEEFLVIGTSDGRIQ 1089
+TL G++ C++ D + I T+ GRIQ
Sbjct: 1252 TCTQTLNVGST--ATCLSFDYTNAY--INTNIGRIQ 1283
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 126/309 (40%), Gaps = 65/309 (21%)
Query: 816 VLSIACFRD--KIFSGHSDGTIKVW---TGRGSILHLIQQIREHTKAVTGLAILQSGEML 870
VLS+A D ++ SG D TIK+W +G G+ Q + H +V +A E +
Sbjct: 844 VLSVAFSADGQRVASGSDDKTIKIWDTASGTGT-----QTLEGHGGSVWSVAFSPDRERV 898
Query: 871 YSGSLDKTARVWSIGNEEIHCVQ-VHDIKDQIQNLAVSNSILCFIPQGAGIKVHLRNGKT 929
SGS DKT ++W + C Q + ++Q++A F P G + +
Sbjct: 899 ASGSDDKTIKIWDAASGT--CTQTLEGHGGRVQSVA-------FSPDGQRVASGSDDHTI 949
Query: 930 KLLNSSKYPKCLALVQG---------------KVYCGCQDGAIQEIDLATGTFATIQTGH 974
K+ +++ C ++G +V G D I+ D A+GT
Sbjct: 950 KIWDAAS-GTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTC------- 1001
Query: 975 RKLLGKANPVHALQVHNGLVYTASTSLDG---------AAVKMWSTSNYNMVGSLPTLSE 1025
L+ H G V++ + S DG +K+W T++ +L
Sbjct: 1002 ---------TQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGG 1052
Query: 1026 -VRAMVVS--SELVYLGCKGGTVEIWDQKRQIRIETLQTGTSGKVQCMALDDNEEFLVIG 1082
V+++V S + V G T++IWD +TL+ G V +A + + + G
Sbjct: 1053 WVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLE-GHGDSVWSVAFSPDGQRVASG 1111
Query: 1083 TSDGRIQAW 1091
+ DG I+ W
Sbjct: 1112 SIDGTIKIW 1120
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 812 ENGKVLSIACFRD--KIFSGHSDGTIKVW-TGRGSILHLIQQIREHTKAVTGLAILQSGE 868
G V S+A D ++ SG SD TIK+W T G+ Q + H V +A G+
Sbjct: 1176 HGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGT---CTQTLEGHGGWVQSVAFSPDGQ 1232
Query: 869 MLYSGSLDKTARVWSIGNEEIHCVQVHDIKDQIQNLAVSNSILCFIPQGAGIKVHLRNGK 928
+ SGS D T ++W + C Q ++ L+ + +I G ++ +
Sbjct: 1233 RVASGSSDNTIKIWDTASGT--CTQTLNVGSTATCLSF-DYTNAYINTNIG-RIQIATAT 1288
Query: 929 TKLLNSSKYPKCLA--LVQGKVYCGCQDGAIQEIDLATGTFATIQTGHRKLLG 979
+ LN P C + L Q + C + + + T A G + +LG
Sbjct: 1289 MESLNQLSSPVCYSYGLGQDHRWITCNNQNVLWLPPEYHTSAFTMQGRKIVLG 1341
>sp|Q9UKB1|FBW1B_HUMAN F-box/WD repeat-containing protein 11 OS=Homo sapiens GN=FBXW11 PE=1
SV=1
Length = 542
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 118/285 (41%), Gaps = 53/285 (18%)
Query: 811 SENGKVLSIACFRD-KIFSGHSDGTIKVWTGRGSILHLIQQIREHTKAVTGLAILQSGEM 869
SEN K + + D KI SG D +IK+W + L ++ + HT +V L + +
Sbjct: 237 SENSKGVYCLQYDDEKIISGLRDNSIKIWDK--TSLECLKVLTGHTGSV--LCLQYDERV 292
Query: 870 LYSGSLDKTARVWSIGNEEIHCVQVHDIKDQIQNLAVSNSILCFIPQGAGIKVHLRNGKT 929
+ +GS D T RVW + E+ +H N AV +HLR
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIH------HNEAV---------------LHLRFSNG 331
Query: 930 KLLNSSKYPKCLALVQGKVYCGCQDGAIQEIDLATGTFATIQTGHRKLLGKANPVHALQV 989
++ SK D +I D+A+ T T++ R L+G V+ +
Sbjct: 332 LMVTCSK-----------------DRSIAVWDMASATDITLR---RVLVGHRAAVNVVDF 371
Query: 990 HNGLVYTASTSLDGAAVKMWSTSNYNMVGSLPTLSE-VRAMVVSSELVYLGCKGGTVEIW 1048
+ + +AS +K+WSTS V +L + + LV G T+ +W
Sbjct: 372 DDKYIVSASGD---RTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 428
Query: 1049 DQKRQIRIETLQTGTSGKVQCMALDDNEEFLVIGTSDGRIQAWGL 1093
D + + L+ G V+C+ D+ +V G DG+I+ W L
Sbjct: 429 DIECGACLRVLE-GHEELVRCIRFDNKR--IVSGAYDGKIKVWDL 470
Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 93/243 (38%), Gaps = 34/243 (13%)
Query: 781 LAFEMVKVLSNGHDSSADFWNHR--ELVHVDSSENGKVLSIACFRDKIFSGHSDGTIKVW 838
L ++ K++S D+S W+ E + V + G VL + I +G SD T++VW
Sbjct: 246 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVW 305
Query: 839 -TGRGSILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDKTARVWSIGNE---------- 887
G +L+ + H +AV L S ++ + S D++ VW + +
Sbjct: 306 DVNTGEVLNTLIH---HNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLV 360
Query: 888 -EIHCVQVHDIKDQIQNLAVSNSILCFIPQGAGIKVHLRNGKTKLLNSSKYPKCLALVQG 946
V V D D+ A + + V NG + + CL
Sbjct: 361 GHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI------ACLQYRDR 414
Query: 947 KVYCGCQDGAIQEIDLATGTFATIQTGHRKLLGKANPVHALQVHNGLVYTASTSLDGAAV 1006
V G D I+ D+ G + GH +L V ++ N + S + DG +
Sbjct: 415 LVVSGSSDNTIRLWDIECGACLRVLEGHEEL------VRCIRFDNKRI--VSGAYDG-KI 465
Query: 1007 KMW 1009
K+W
Sbjct: 466 KVW 468
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 1026 VRAMVVSSELVYLGCKGGTVEIWDQKRQIRIETLQTGTSGKVQCMALDDNEEFLVIGTSD 1085
V + E + G + +++IWD K + + TG +G V C+ D E +V G+SD
Sbjct: 243 VYCLQYDDEKIISGLRDNSIKIWD-KTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSD 299
Query: 1086 GRIQAWGLS 1094
++ W ++
Sbjct: 300 STVRVWDVN 308
>sp|P87053|POF1_SCHPO F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pof1 PE=1 SV=1
Length = 605
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 125/302 (41%), Gaps = 33/302 (10%)
Query: 800 WNHRELVHVD-SSENGKVLSIACFRDKIFSGHSDGTIKVWTGRGSILHLIQQI---REHT 855
W H V S + V+ + R+ + SG D TI++W L QQ+ H+
Sbjct: 259 WRHGRCRQVVLSGHSDGVMCLQLVRNILASGSYDATIRLWN-----LATFQQVALLEGHS 313
Query: 856 KAVTGLAILQSGEMLYSGSLDKTARVWSIGNEEIHCVQV-HDIKDQIQNLAVSNSILCFI 914
VT L Q L SGS+DKT R+W+ E C+ + H D + L +++L
Sbjct: 314 SGVTCLQFDQC--KLISGSMDKTIRIWNYRTSE--CISILHGHTDSVLCLTFDSTLLVSG 369
Query: 915 PQGAGIKV-HLRNGKTKLLNSSKYPKCLALV---QGKVYCGCQDGAIQEIDLATGTFATI 970
+K+ H GK L P + +G V G D I+ L T T
Sbjct: 370 SADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHT 429
Query: 971 QTGHRKLLGKANPVHALQVHNGLVYTASTSLDGAAVKMWSTSNYNMVGSLPTLSEVRAMV 1030
+ H PV +L + + ++ S SLDG +K W V +L E +
Sbjct: 430 FSAH------IGPVQSLALADSRLF--SCSLDG-TIKQWDIEKKKCVHTLFGHIEGVWEI 480
Query: 1031 VSSELVYL-GCKGGTVEIWDQKRQIRIETLQTGTSGKVQCMALDDNEEFLVIGTSDGRIQ 1089
+ L + G G V++W+ + TL+ S V +AL D E +V G+ DG+I
Sbjct: 481 AADHLRLISGAHDGVVKVWEACEC--VHTLKN-HSEPVTSVALGDCE--VVSGSEDGKIY 535
Query: 1090 AW 1091
W
Sbjct: 536 LW 537
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 781 LAFEMVKVLSNGHDSSADFWNHR--ELVHVDSSENGKVLSIACFRDKIFSGHSDGTIKVW 838
L F+ K++S D + WN+R E + + VL + + SG +D T+K+W
Sbjct: 319 LQFDQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLW 378
Query: 839 TGRGSILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDKTARVWSI-GNEEIHCVQVHDI 897
G +R HT V + I++ ++ SGS D T ++WS+ N +H H
Sbjct: 379 HFSGGKR---ITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAH-- 433
Query: 898 KDQIQNLAVSNSIL 911
+Q+LA+++S L
Sbjct: 434 IGPVQSLALADSRL 447
Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 781 LAFEMVKVLSNGHDSSADFWNHRELVHVDSSENGKVLSIACFRDKIFSGHSDGTIKVW 838
+A + ++++S HD W E VH + + V S+A ++ SG DG I +W
Sbjct: 480 IAADHLRLISGAHDGVVKVWEACECVHTLKNHSEPVTSVALGDCEVVSGSEDGKIYLW 537
Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 12/115 (10%)
Query: 788 VLSNGHDSSADFWN--HRELVHVDSSENGKVLSIACFRDKIFSGHSDGTIKVWTGRGSIL 845
VLS DS+ W+ +H S+ G V S+A ++FS DGTIK W
Sbjct: 407 VLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEKK-- 464
Query: 846 HLIQQIREHTKAVTGLAILQSGEMLYSGSLDKTARVWSIGNEEIHCVQVHDIKDQ 900
+ + H + V +A L SG+ D +VW C VH +K+
Sbjct: 465 KCVHTLFGHIEGVWEIA--ADHLRLISGAHDGVVKVWEA------CECVHTLKNH 511
Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 15/178 (8%)
Query: 920 IKVHLRNGKTK---LLNSSKYPKCLALVQGKVYCGCQDGAIQEIDLATGTFATIQTGHRK 976
++ + R+G+ + L S CL LV+ + G D I+ +LAT + GH
Sbjct: 255 VECNWRHGRCRQVVLSGHSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGH-- 312
Query: 977 LLGKANPVHALQVHNGLVYTASTSLDGAAVKMWSTSNYNMVGSLPTLSE-VRAMVVSSEL 1035
++ V LQ + + S +++W+ + L ++ V + S L
Sbjct: 313 ----SSGVTCLQFDQCKLISGSMD---KTIRIWNYRTSECISILHGHTDSVLCLTFDSTL 365
Query: 1036 VYLGCKGGTVEIWDQKRQIRIETLQTGTSGKVQCMALDDNEEFLVIGTSDGRIQAWGL 1093
+ G TV++W RI TL+ G +G V + + + ++ G+ D I+ W L
Sbjct: 366 LVSGSADCTVKLWHFSGGKRI-TLR-GHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSL 421
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 160 PPKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYV 219
PP+ F+CPIT I +DP G TYE AI W ERG+ + P+ ++L T L N
Sbjct: 353 PPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLV-PNLA 411
Query: 220 LKRLIASW 227
L+ I W
Sbjct: 412 LRSAIQEW 419
>sp|Q3E9F7|PUB46_ARATH Putative U-box domain-containing protein 46 OS=Arabidopsis thaliana
GN=PUB46 PE=3 SV=1
Length = 458
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 161 PKDFVCPITTHIFDDPVTLETGQTYERRAIQEWIERGNSSCPITRQKLSSTKLPKTNYVL 220
PK+F+C ++ I +PV + +GQTYE+R I EW+ + +CP T+Q LS +L N+++
Sbjct: 73 PKEFICTLSNTIMIEPVIIASGQTYEKRYITEWL-KHERTCPKTKQVLSH-RLWIPNHLI 130
Query: 221 KRLIASW 227
LI W
Sbjct: 131 SDLITQW 137
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 136/336 (40%), Gaps = 67/336 (19%)
Query: 814 GKVLSIACFRD-KIF-SGHSDGTIKVW---TGRGSILHLIQQIREHTKAVTGLAILQSGE 868
G VL++A D K+F +G S G ++ W TG+ + + H V + Q G+
Sbjct: 865 GSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKE-----LLTCKGHNSWVNSVGFSQDGK 919
Query: 869 MLYSGSLDKTARVWSIGNEEI------HCVQVHDI-------------KDQIQNLAVSNS 909
ML SGS D+T R+W I + + H +V + DQ L +S
Sbjct: 920 MLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISS 979
Query: 910 ILC-FIPQGAGIKVH----------LRNG---KTKLLNSSKYPKCLALVQGKVYC----- 950
C +I QG V+ L G +T L +C + QG C
Sbjct: 980 GECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVV 1039
Query: 951 GCQDGAIQEIDLATGTFATIQTGHRKLLGKANPVHALQVHNGLVYTASTSLDGAA----- 1005
DGA+ LA+G+ QT + N ++ LQ H V + S DGA
Sbjct: 1040 FSSDGAM----LASGS--DDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGG 1093
Query: 1006 ----VKMWSTSNYNMVGSLPTL-SEVRAMVVSSELVYL--GCKGGTVEIWDQKRQIRIET 1058
V++W S+ N + +L S VR +V S V L G V +WD + + T
Sbjct: 1094 DDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYT 1153
Query: 1059 LQTGTSGKVQCMALDDNEEFLVIGTSDGRIQAWGLS 1094
LQ G + V +A + L G+ D ++ W +S
Sbjct: 1154 LQ-GHTNWVNAVAFSPDGATLASGSGDQTVRLWDIS 1188
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 119/289 (41%), Gaps = 45/289 (15%)
Query: 828 SGHSDGTIKVWTGRGS-ILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDKTARVWSIGN 886
SG D T+++W S L+++Q HT V + G L SGS D+T R+W I +
Sbjct: 1175 SGSGDQTVRLWDISSSKCLYILQG---HTSWVNSVVFNPDGSTLASGSSDQTVRLWEINS 1231
Query: 887 EEIHCV-QVHDIKDQIQNLAVSNSILCFIPQGAGIKVHLRNGKTKLLNSSKYPKCLALVQ 945
+ C Q H + NS++ F P G+ + + +L + S KCL Q
Sbjct: 1232 SKCLCTFQGH--------TSWVNSVV-FNPDGSMLASGSSDKTVRLWDISS-SKCLHTFQ 1281
Query: 946 GKV-----YCGCQDGAIQEIDLATGTFATIQTGHRKLLGKANPVHALQVHNGLVYTASTS 1000
G DG++ LA+G+ QT + + +H Q H V + + S
Sbjct: 1282 GHTNWVNSVAFNPDGSM----LASGS--GDQTVRLWEISSSKCLHTFQGHTSWVSSVTFS 1335
Query: 1001 LDGA---------AVKMWSTSN----YNMVGSLPTLSEVRAMVVSSELVYLGCKGG--TV 1045
DG V++WS S+ Y +G + V +++ S + L G TV
Sbjct: 1336 PDGTMLASGSDDQTVRLWSISSGECLYTFLGH---TNWVGSVIFSPDGAILASGSGDQTV 1392
Query: 1046 EIWDQKRQIRIETLQTGTSGKVQCMALDDNEEFLVIGTSDGRIQAWGLS 1094
+W + TLQ G + V + + L G+ D ++ W +S
Sbjct: 1393 RLWSISSGKCLYTLQ-GHNNWVGSIVFSPDGTLLASGSDDQTVRLWNIS 1440
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 113/288 (39%), Gaps = 66/288 (22%)
Query: 828 SGHSDGTIKVWTGRGSILHLIQQIREHTKAVTGLAILQSGEMLYSGSLDKTARVWSIGNE 887
SG SD T+++W S + + HT V + G ML SGS DKT R+W I +
Sbjct: 1217 SGSSDQTVRLWEINSS--KCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSS 1274
Query: 888 E-IHCVQVHDIKDQIQNLAVSNSILCFIPQGAGIKVHLRNGKTKLLNSSKYPKCLALVQG 946
+ +H Q H + + ++A F P G+ + + +L S KCL QG
Sbjct: 1275 KCLHTFQGH--TNWVNSVA-------FNPDGSMLASGSGDQTVRLWEISS-SKCLHTFQG 1324
Query: 947 K---------------VYCGCQDGAIQEIDLATGTFATIQTGHRKLLG------------ 979
+ G D ++ +++G GH +G
Sbjct: 1325 HTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILA 1384
Query: 980 --------------KANPVHALQVHNGLVYTASTSLDGA---------AVKMWSTSNYNM 1016
++ LQ HN V + S DG V++W+ S+
Sbjct: 1385 SGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGEC 1444
Query: 1017 VGSLPT-LSEVRAMVVSSELVYL--GCKGGTVEIWDQKRQIRIETLQT 1061
+ +L ++ VR++ SS+ + L G T+++WD K I+TL++
Sbjct: 1445 LYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTLKS 1492
Score = 40.4 bits (93), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 123/301 (40%), Gaps = 45/301 (14%)
Query: 820 ACFRDKIFS--------GHSDGTIKVW-TGRGSILHLIQQIREHTKAVTGLAILQSGEML 870
+C R +FS G D +++W G+ L+ +Q +T V L +G L
Sbjct: 1075 SCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQG---YTSWVRFLVFSPNGVTL 1131
Query: 871 YSGSLDKTARVWSIGNEE-IHCVQVHDIKDQIQNLAVSNSILCFIPQGAGIKVHLRNGKT 929
+GS D+ R+W I +++ ++ +Q H + + +A F P GA + +
Sbjct: 1132 ANGSSDQIVRLWDISSKKCLYTLQGH--TNWVNAVA-------FSPDGATLASGSGDQTV 1182
Query: 930 KLLNSSKYPKCLALVQGKVYCGCQDGAIQEID---LATGTFATIQTGHRKLLGKANPVHA 986
+L + S KCL ++QG + + + D LA+G+ + QT + + +
Sbjct: 1183 RLWDISS-SKCLYILQG--HTSWVNSVVFNPDGSTLASGS--SDQTVRLWEINSSKCLCT 1237
Query: 987 LQVHNGLVYTASTSLDGA---------AVKMWSTSN----YNMVGSLPTLSEVRAMVVSS 1033
Q H V + + DG+ V++W S+ + G ++ V A
Sbjct: 1238 FQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSV-AFNPDG 1296
Query: 1034 ELVYLGCKGGTVEIWDQKRQIRIETLQTGTSGKVQCMALDDNEEFLVIGTSDGRIQAWGL 1093
++ G TV +W+ + T Q G + V + + L G+ D ++ W +
Sbjct: 1297 SMLASGSGDQTVRLWEISSSKCLHTFQ-GHTSWVSSVTFSPDGTMLASGSDDQTVRLWSI 1355
Query: 1094 S 1094
S
Sbjct: 1356 S 1356
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 380,563,364
Number of Sequences: 539616
Number of extensions: 15522435
Number of successful extensions: 55468
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 691
Number of HSP's that attempted gapping in prelim test: 51881
Number of HSP's gapped (non-prelim): 3489
length of query: 1094
length of database: 191,569,459
effective HSP length: 128
effective length of query: 966
effective length of database: 122,498,611
effective search space: 118333658226
effective search space used: 118333658226
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)