BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001355
(1093 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225434576|ref|XP_002279036.1| PREDICTED: uncharacterized protein LOC100241532 [Vitis vinifera]
Length = 1106
Score = 1041 bits (2691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/1113 (51%), Positives = 741/1113 (66%), Gaps = 32/1113 (2%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V++ARQCL++E+AR LDDAVGVAR+R H+QTTSLH +SALL PSS LR+AC R +
Sbjct: 1 MPTPVSIARQCLTDEAARALDDAVGVARRRSHAQTTSLHAISALLAFPSSTLRDACARAR 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEFPPISNSLMAAIKRSQAQQRRNPDNYHLQ 120
S + SP+LQFRALEL +GV+ DRLPSSK++E PP+SNSLMAAIKRSQA QRR+P+N+HLQ
Sbjct: 61 SSAYSPRLQFRALELSVGVSLDRLPSSKALEEPPVSNSLMAAIKRSQASQRRHPENFHLQ 120
Query: 121 QIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRLS 180
Q QTAS L+V+LK+F+L+ILDDP+ SRVFGEAGF S DIK+A+IQP ++ R
Sbjct: 121 Q---QNQTASFLRVELKHFILSILDDPIVSRVFGEAGFRSCDIKIAMIQPPLSPVS-RFP 176
Query: 181 LTRCPPIFLYNLTDSFPGRAGLKLPF----GPDDVDENCRRIGEVLAGRDEKKGKNPLLV 236
TRCPPIFL NLTDS P R PF G D DEN RRIGEVL K GKNPLL+
Sbjct: 177 RTRCPPIFLCNLTDSDPARRTFSFPFAGVSGSGDGDENSRRIGEVLT---RKTGKNPLLI 233
Query: 237 GVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKFKEVE 296
GVC++ AL+ F + V K + P +I GL+++C+E EI+EFVG + + + LK KE+
Sbjct: 234 GVCSSDALRCFADCVERRKGDVLPAEIAGLNLICIEKEISEFVGRGGSEDKLGLKLKELG 293
Query: 297 SAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWLIGAAMSYE 356
+ SGPG+ VN+GELK LV D EAA FVVS+LTSLLK+ LWL+G++ SYE
Sbjct: 294 HMAEQYSGPGIAVNFGELKALVGDDAPGEAASFVVSKLTSLLKAH--PNLWLMGSSGSYE 351
Query: 357 TYLKMLAKFPGLDNDWDLQLLPIHW----------KSSLMGSFVPFGGFFSSPPDFKNPV 406
TYLK L +FP ++ DWDL LLPI +SSLMGSFVPF GFFS+P DFKNP+
Sbjct: 352 TYLKFLTQFPSIEEDWDLHLLPITSSRSSVEGFCSRSSLMGSFVPFAGFFSTPTDFKNPL 411
Query: 407 RSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVGTAK 466
S + TLC+LC EK EQEV+A+LK S+ S+ D+ L S +A DT+KG K
Sbjct: 412 NSTNQSITLCHLCNEKCEQEVSAILKGGSTISLADRYSGTLPSWLLMAEPDTNKGADAVK 471
Query: 467 AKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEFVRLMANRKGSSS 526
AKDD ALN K++ +Q+KW D CQ LH PK + V +E + +R+ +SS
Sbjct: 472 AKDDGRALNDKVLGVQKKWYDICQRLHHAPPYPKSIFQPVPQVSGAECYGFIPDRRETSS 531
Query: 527 KYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPIN-SSTKPQSN 585
K S ES N SP M Q IS ++ +P+ SE+ +VNFQS+L + S +K
Sbjct: 532 KDSSPSESGSANLSPSTTMNLQKISPSKIQIPLPVVSESESVNFQSKLAGSVSKSKQVET 591
Query: 586 NDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKLIDNKEQC-- 643
P PL +L + TS S + SVTTDLGLG +Y S QE L +KE+
Sbjct: 592 RSSPWFSPCPLPNLSLAPDRTSSSCITSVTTDLGLGTLYASNSQETKRLNLQGHKERMNY 651
Query: 644 FSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICT 703
FSGS+SAEFD VS + QS SCS P G D RD+K+L ALA KVGWQDEAIC
Sbjct: 652 FSGSVSAEFDVVSVNNSSQIGQSPSCSVPDLGGQMDARDFKSLWRALASKVGWQDEAICA 711
Query: 704 ISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVS 763
ISQ VS R GN R GSN K IWL+FLGPDKVGKK+IA+ALAEI+F + L+ VD+
Sbjct: 712 ISQTVSSCRTGNARRHGSNLKGDIWLSFLGPDKVGKKRIAAALAEIMFRSSKSLVSVDLG 771
Query: 764 SEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQS 823
+ +Q NSIFD ++ C + RGK + DYI E R KP VVFLE++DK AD +VQ+
Sbjct: 772 YQHGSNQSNSIFDQHELNSCGIEFRGKTITDYIAGELRKKPQLVVFLENIDK-ADLLVQT 830
Query: 824 SLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIILGAKRWQ 883
SL++AI TGKF DS+GR++SI+ MIFV T+T KG ++ PV+FSEE ILGAK WQ
Sbjct: 831 SLSQAIRTGKFPDSHGREISINHMIFVTTATSKKGNRNLVSGKEPVEFSEERILGAKSWQ 890
Query: 884 MQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDDG-----DSPINSQKQVDD 938
M+ I +A+R +GMNV VTPR+ SNP+S KRK D G D + K+
Sbjct: 891 MKILIGCVTGEASRSNGMNVLVTPREGTSNPKSTSKRKFIDTGSFAEQDKYLEMSKRACK 950
Query: 939 SFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNFDLLAE 998
+ SYLDLNLP +E EED S DSD++ E+S AWLE+F DQ D F+P NFD +A+
Sbjct: 951 ASNSYLDLNLPVEELEEDVDSANCDSDSLSESSEAWLEEFLDQMDEKVTFKPFNFDAVAQ 1010
Query: 999 KILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYEVRR 1058
K+L+EI FQ+ G ++ LEID E++VQILAA WLS++ A+++W+E V+ +SF E R+
Sbjct: 1011 KLLKEISLNFQKIIGSDIQLEIDSEVMVQILAAAWLSEKGGAVDDWVEQVLSKSFTEARQ 1070
Query: 1059 KHHFTAGSVVKLVAHEGLLVEEEASGIRLPKII 1091
++ TA S+VKLV EGL VEE+A G+ LP I
Sbjct: 1071 RYRLTAQSLVKLVPCEGLSVEEQAPGVCLPARI 1103
>gi|147866119|emb|CAN78825.1| hypothetical protein VITISV_006557 [Vitis vinifera]
Length = 1088
Score = 984 bits (2545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/1113 (50%), Positives = 722/1113 (64%), Gaps = 50/1113 (4%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V++ARQCL++E+AR LDDAVGVAR+R H+QTTSLH +SALL PSS LR+AC R +
Sbjct: 1 MPTPVSIARQCLTDEAARALDDAVGVARRRSHAQTTSLHAISALLAFPSSTLRDACARAR 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEFPPISNSLMAAIKRSQAQQRRNPDNYHLQ 120
S + SP+LQFRALEL +GV+ DRLPSSK++E PP+SNSLMAAIKRSQA QRR+P+N+HLQ
Sbjct: 61 SSAYSPRLQFRALELSVGVSLDRLPSSKALEEPPVSNSLMAAIKRSQASQRRHPENFHLQ 120
Query: 121 QIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRLS 180
Q QTAS L+V+LK+F+L+ILDDP+ SRVFGEAGF S DIK+A+I P ++ R
Sbjct: 121 Q---QNQTASFLRVELKHFILSILDDPIVSRVFGEAGFRSCDIKIAMIXPPLSPV-SRFP 176
Query: 181 LTRCPPIFLYNLTDSFPGRAGLKLPF----GPDDVDENCRRIGEVLAGRDEKKGKNPLLV 236
TRCPPIFL NLTDS P R PF G D DEN RRIGEVL K GKNPLL+
Sbjct: 177 RTRCPPIFLCNLTDSDPARRTFSFPFAGVSGSGDGDENSRRIGEVLT---RKTGKNPLLI 233
Query: 237 GVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKFKEVE 296
GVC++ AL+ F + V K + P +I GL+++C+E EI+EFVG + + + LK KE+
Sbjct: 234 GVCSSDALRCFADCVERRKGDVLPAEIAGLNLICIEKEISEFVGRGGSEDKLGLKLKELG 293
Query: 297 SAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWLIGAAMSYE 356
+ SGPG+ VN+GELK LV D EAA VVS+LTSLLK+ LWL+G++ SYE
Sbjct: 294 HMAEQYSGPGIAVNFGELKALVGDDAPGEAASXVVSKLTSLLKA--HPNLWLMGSSGSYE 351
Query: 357 TYLKMLAKFPGLDNDWDLQLLPIH----------WKSSLMGSFVPFGGFFSSPPDFKNPV 406
TYLK L +FP ++ DWDL LLPI +SSLMGSFVPF GFFS+P DFKNP+
Sbjct: 352 TYLKFLTQFPSIEEDWDLHLLPITSSRSSVEGFCSRSSLMGSFVPFAGFFSTPTDFKNPL 411
Query: 407 RSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVGTAK 466
S + TLC+LC EK EQEV+A+LK S+ S+ D+ L S +A DT+KG K
Sbjct: 412 NSTNQSITLCHLCNEKCEQEVSAILKGGSTISLADRYSGTLPSWLLMAEPDTNKGADAVK 471
Query: 467 AKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEFVRLMANRKGSSS 526
AKDD ALN K++ +Q+KW D CQ LH PK + V +E + +R+ +SS
Sbjct: 472 AKDDGRALNDKVLGVQKKWYDICQRLHHAPPYPKSIFQPVPQVSGAECYGFIPDRRETSS 531
Query: 527 KYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPIN-SSTKPQSN 585
K S ES N SP M Q IS ++ +P+ SE+ +VNFQS+L + S +K
Sbjct: 532 KDSSPSESGSANLSPSTTMNLQKISPSKIQIPLPVVSESXSVNFQSKLAGSVSKSKQVET 591
Query: 586 NDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKLIDNKEQC-- 643
P PL +L + TS S + SVTTDLGLG +Y S QE L +KE+
Sbjct: 592 RSSPWFSPCPLPNLSLAPDRTSSSCITSVTTDLGLGTLYASNSQETKRLNLQGHKERMNY 651
Query: 644 FSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICT 703
FSGS+SAEFD VS + QS SCS P G D RD+K+L ALA V
Sbjct: 652 FSGSVSAEFDVVSVNNSSQIGQSPSCSVPDLGGQMDARDFKSLWRALATAV--------L 703
Query: 704 ISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVS 763
Q V GSN K IWL+FLGPDKVGKK+IA+ALAEI+F + L+ VD+
Sbjct: 704 EMQGVH----------GSNLKGDIWLSFLGPDKVGKKRIAAALAEIMFRSSXSLVSVDLG 753
Query: 764 SEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQS 823
+ +Q NSIFD ++ C + RGK + DYI E R KP VVFLE++DK AD + Q+
Sbjct: 754 YQHGSNQSNSIFDQHELNSCGIEFRGKTITDYIAGELRKKPQXVVFLENIDK-ADLLXQT 812
Query: 824 SLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIILGAKRWQ 883
SL++AI TGKF DS+GR++SI+ MIFV T+T KG ++ PV+FSEE ILGAK WQ
Sbjct: 813 SLSQAIRTGKFPDSHGREISINHMIFVTTATSKKGNRNLVSGKEPVEFSEERILGAKSWQ 872
Query: 884 MQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDDG-----DSPINSQKQVDD 938
M+ I +A+R +GMNV VTPR+ SNP+S KRK D G D + K+
Sbjct: 873 MKILIGCVTGEASRSNGMNVLVTPREGTSNPKSTSKRKFIDTGSFAEQDKYLEMSKRACK 932
Query: 939 SFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNFDLLAE 998
+ SYLDLNLP +E EED S DSD++ E+S AWLE+F DQ D F+P NFD +A+
Sbjct: 933 ASNSYLDLNLPVEELEEDVDSANCDSDSLSESSEAWLEEFLDQMDEKVTFKPFNFDAVAQ 992
Query: 999 KILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYEVRR 1058
K+L+EI FQ+ G ++ LEID E++VQILAA WLS++ A+++W+E V+ +SF E R+
Sbjct: 993 KLLKEISLNFQKIIGSDIQLEIDSEVMVQILAAAWLSEKGGAVDDWVEQVLSKSFTEARQ 1052
Query: 1059 KHHFTAGSVVKLVAHEGLLVEEEASGIRLPKII 1091
++ TA S+VKLV EGL VEE+A G+ LP I
Sbjct: 1053 RYRLTAQSLVKLVPCEGLSVEEQAPGVCLPARI 1085
>gi|224106239|ref|XP_002314097.1| predicted protein [Populus trichocarpa]
gi|222850505|gb|EEE88052.1| predicted protein [Populus trichocarpa]
Length = 1063
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/1122 (48%), Positives = 722/1122 (64%), Gaps = 88/1122 (7%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V +ARQCL+EE+AR LD+AV VAR+R HSQTTSLH VSALL +P+S L+ AC R
Sbjct: 1 MPTPVGVARQCLTEEAARALDEAVAVARRRSHSQTTSLHAVSALLALPASTLKNACSRTT 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEF-PPISNSLMAAIKRSQAQQRRNPDNYHL 119
+ + S + QF L+LC+GV+ DRLPSSK++E PPISNSLMAAIKRSQA QRR+PDN+H+
Sbjct: 61 TSAYSSRRQFHVLDLCVGVSLDRLPSSKTLEEDPPISNSLMAAIKRSQANQRRHPDNFHM 120
Query: 120 QQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRL 179
QIHCNQQ AS+LKV++K+F+L+ILDDP+ SRVFGEAGF S DIK+AI+ P V Q +
Sbjct: 121 HQIHCNQQAASVLKVEMKHFILSILDDPIVSRVFGEAGFRSCDIKMAIVHPPVIQ-SSKF 179
Query: 180 SLTRCPPIFLYNLTDS---FPGRA-GLKLPFGPD-----DVDENCRRIGEVLAGRDEKKG 230
S C P+FL NL S PGR G PF D+ CRRIGE L R E KG
Sbjct: 180 SRAGCAPVFLCNLPGSNSTVPGRPPGFSFPFSSGLDDDVGDDDVCRRIGEALV-RREGKG 238
Query: 231 KNPLLVGVCANSALKGFVESVN-GGKVGLFPRQIYGLDVVCVEYEINEFVG-GRVNVEMM 288
+N LLVGV A++ALKGFV+SVN K G+ P +I G+ V+ VE E+ FV G + E M
Sbjct: 239 RNLLLVGVYASNALKGFVDSVNKDNKGGVLPSEISGVSVISVEDEVIHFVSEGGGDKEKM 298
Query: 289 MLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWL 348
LKF E+ + RCSGPG+VVN G+LKVLV ++V +A ++VS+LT LL+ G EK+WL
Sbjct: 299 RLKFDELGQELERCSGPGIVVNIGDLKVLVGENVCRDALSYLVSKLTGLLE-GFREKIWL 357
Query: 349 IGAAMSYETYLKMLAKFPGLDNDWDLQLLPIH----------WKSSLMGSFVPFGGFFSS 398
+GAA SY+TYLK + +F G++ DWDL++LPI KSSL+GSFVPFGGFFS+
Sbjct: 358 VGAADSYDTYLKSVGRFSGVEKDWDLRILPITSYKSPIGGFGTKSSLLGSFVPFGGFFST 417
Query: 399 PPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDT 458
P DFK P S + T C+LC K EQ+VAA+LK+ + SV +QC +NL SS ++A LDT
Sbjct: 418 PSDFKIPSNSINQSITRCHLCNAKYEQDVAAILKMGPTISVAEQCSENLPSSLQMAELDT 477
Query: 459 SKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQ-RSHVQLSEFVRL 517
K V K KDD T+LNAKI+ LQ +W+D CQ LH Q K D+ Q S ++E +
Sbjct: 478 RKAVDMVKTKDDGTSLNAKILGLQNRWDDICQRLHHAQPFSKFDVSQATSQAAIAEGFQY 537
Query: 518 MANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPIN 577
+ + KY ++ SE NVN QS+L
Sbjct: 538 L------TGKYCAV-------------------------------SEVENVNHQSKLLEE 560
Query: 578 SSTKPQSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKLI 637
Q + L P+P+A++ P + TS + SVTTDLGLG +Y S+ +E T KL
Sbjct: 561 VPRCQQEEKESPWLTPNPMANVSLPTDRTSSFSVTSVTTDLGLGTLYASSTRELITTKLC 620
Query: 638 DNKE--QCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVG 695
D +E + FSGS S E+D + T + QSSSCS P +G F+ R++K++ AL+E+VG
Sbjct: 621 DPREHQEHFSGSSSVEYD---DNTSLQIAQSSSCSGPSSGGQFNLRNFKSVMRALSEQVG 677
Query: 696 WQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKG 755
WQD A IS+AVSR + G+GR GSNSK I AFLGPD++GKKKIASALA ++FG+
Sbjct: 678 WQDRATLAISEAVSRCKAGHGRHHGSNSKGDISFAFLGPDRIGKKKIASALAMVMFGSIQ 737
Query: 756 KLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKL-RGKVLVDYIYQEFRSKPYSVVFLEDLD 814
+ +D+ S +V+ NS+ + Q + D +L R VDYI + KP+S++FLE++D
Sbjct: 738 SFVSMDLGSHGKVNSSNSMLESQELH--DDELGRSTTFVDYIASKLSKKPHSLIFLENVD 795
Query: 815 KAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEE 874
K ADP+VQ+SL+ A+ TGKF DS GR+VS + IFVATSTI G ++ + ++FSEE
Sbjct: 796 K-ADPLVQNSLSYALRTGKFPDSRGREVSTNSTIFVATSTITVGNTNLLSERETIRFSEE 854
Query: 875 IILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDDG---DSPIN 931
+IL AK WQMQ + H A+AA S + ++RK T D +S
Sbjct: 855 MILRAKSWQMQILVEH-VAEAATKS------------ISSGNKRKLDVTSDSMEQESTCE 901
Query: 932 SQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPL 991
S K+ RSYLDLNLP ++ E + DSD+I E+S AWLE F DQ D VF+P
Sbjct: 902 SSKRAHKPLRSYLDLNLPVEDTGECANCSDNDSDSISESSQAWLEYFSDQVDEKVVFKPF 961
Query: 992 NFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLR 1051
+FD LAEK ++EI + QR FG EVLLEID+E++VQILAA+WLS++K+A+ +WIE VV R
Sbjct: 962 DFDSLAEKTMKEISKQCQRVFGSEVLLEIDHEVMVQILAASWLSEKKRAMGDWIEEVVGR 1021
Query: 1052 SFYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIRLPKIINV 1093
F E ++K A +VKLV +GL+V+E+A GI LP IN+
Sbjct: 1022 GFSEAKQKSQAGAQCIVKLVTCKGLVVKEQAPGICLPSRINL 1063
>gi|224059278|ref|XP_002299803.1| predicted protein [Populus trichocarpa]
gi|222847061|gb|EEE84608.1| predicted protein [Populus trichocarpa]
Length = 1025
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/1121 (47%), Positives = 698/1121 (62%), Gaps = 124/1121 (11%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V++ARQCL++E+AR LD+AV VAR+R H QTTSLH VSALL +P+S LR+AC R
Sbjct: 1 MPTPVSVARQCLTDEAARALDEAVAVARRRNHCQTTSLHAVSALLALPASTLRDACSRAT 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSV-EFPPISNSLMAAIKRSQAQQRRNPDNYHL 119
+ + S + QFRAL+L +GV+ DRLPSS+++ E PPISNSLMAAIKRSQA QRR+PDN+HL
Sbjct: 61 TNAFSSRRQFRALDLSVGVSLDRLPSSRTLDEDPPISNSLMAAIKRSQANQRRHPDNFHL 120
Query: 120 QQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRL 179
QIHCNQQ AS+LKV++K+F+L+ILDDP+ SRVFGEAGF S DIK+AI+ P V+Q +
Sbjct: 121 HQIHCNQQAASVLKVEMKHFILSILDDPIVSRVFGEAGFRSYDIKIAIVHPPVSQ-SSKY 179
Query: 180 SLTRCPPIFLYNLTDS---FPGR-AGLKLPFGPD------DVDENCRRIGEVLAGRDEKK 229
S C PIFL NL S PGR G PF D+ CRRIGE L RD K
Sbjct: 180 SPVGCAPIFLCNLPGSNITGPGRPPGFSFPFSSGLDDDDVGDDDVCRRIGEALVRRD-GK 238
Query: 230 GKNPLLVGVCANSALKGFVESVNG-GKVGLFPRQIYGLDVVCVEYEINEFV---GGRVNV 285
G+N LLVGV A+ ALKGFV+SVN K G+ P +I G+ V+ +E EI FV GG +
Sbjct: 239 GRNLLLVGVYASKALKGFVDSVNKENKGGVLPSEINGVSVISIEDEIIHFVSELGG--DK 296
Query: 286 EMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEK 345
E M LKF+E+ + + SGPG+VVN+G++KVLV ++V +A ++VS+LTSLL+ G K
Sbjct: 297 EKMGLKFEELGQELEQYSGPGIVVNFGDMKVLVGENVCGDAVSYLVSKLTSLLEGFRG-K 355
Query: 346 LWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI----------HWKSSLMGSFVPFGGF 395
+WL+G A SY+TYLK + +F ++ DWDL++LPI KSSL+GSFVPFGGF
Sbjct: 356 IWLVGTADSYDTYLKSVGRFSSVEKDWDLRVLPIASYKSPVGDFSSKSSLLGSFVPFGGF 415
Query: 396 FSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAA 455
FS+P DFK P S + C+LC K E++VAA+LK+ S+ SV DQ + L S ++A
Sbjct: 416 FSTPSDFKKPTNSINQSIICCHLCNAKYEKDVAAILKMGSTTSVADQSSEKLPSLLQMAE 475
Query: 456 LDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQ-RSHVQLSEF 514
LDT K V K DD TALNAKI+ L+ KWND CQ LH Q K D+ Q S V ++E
Sbjct: 476 LDTGKAVDAVKVDDD-TALNAKILGLRNKWNDICQRLHHAQPFFKFDVSQATSQVSIAE- 533
Query: 515 VRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRL 574
G SK+ C + SE +VN S+
Sbjct: 534 --------GFQSKH-------CVD------------------------SETEDVNHGSKQ 554
Query: 575 PINSSTKPQSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTP 634
Q + P PL+++ P + TS S + SVTT LGLG +Y ++ QE N
Sbjct: 555 LEEVPRLKQKEKESPWFTPCPLSNVSLPSDRTSSSSVTSVTTHLGLGTLYATSAQEHNIT 614
Query: 635 KLIDNKE--QCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAE 692
KL D E Q FSGS SAE D+K++ A++E
Sbjct: 615 KLRDPMEHLQHFSGSGSAE------------------------------DFKSVMRAISE 644
Query: 693 KVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFG 752
KVGWQD A I +AVSR + G+GR GSNSK I LGPD++GKKKIASALAE++FG
Sbjct: 645 KVGWQDRATYAIGEAVSRCKAGHGRHHGSNSKGDISFILLGPDRIGKKKIASALAEVMFG 704
Query: 753 NKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLED 812
+ I +D+ S +VS NSIFD Q + + D R VD I + KP+S++FLE+
Sbjct: 705 STQSFISLDLGSHDKVSSSNSIFDSQELQYDDELGRSMTFVDRIASKLSKKPHSLIFLEN 764
Query: 813 LDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFS 872
+DK ADP+VQ SL+ A+ TG+F DS GR+VS + IFVATSTI+ G + + +KFS
Sbjct: 765 IDK-ADPLVQHSLSYALRTGRFPDSRGREVSTNNTIFVATSTIIVGNTNFLSENKSIKFS 823
Query: 873 EEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDDGDSPINS 932
EE+ILGAK WQMQ + H ++ S M V+++ R+ T S
Sbjct: 824 EEMILGAKSWQMQILVEHAAEATSKRSEMKVRIS-------------REITS------AS 864
Query: 933 QKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLN 992
KQ + RSYLDLNLP ++ E + DSD+I E+S AWLEDF DQ D VF+ +
Sbjct: 865 SKQAHKALRSYLDLNLPVEDTGECANYGDTDSDSISESSQAWLEDFSDQVDEKVVFKTFD 924
Query: 993 FDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRS 1052
FD LAEKI++EI +FQ AFG+E+LLEID E++VQILAA WLS++++A+E+WIE VV R
Sbjct: 925 FDSLAEKIVKEIGKQFQMAFGYEILLEIDDEVMVQILAAAWLSEKERAMEDWIEEVVGRG 984
Query: 1053 FYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIRLPKIINV 1093
F + + K F+A VVKLV +GL+++E+A GIRLP IN+
Sbjct: 985 FRKAKLKSQFSAQCVVKLVTCKGLVLKEQAPGIRLPSRINL 1025
>gi|297745889|emb|CBI15945.3| unnamed protein product [Vitis vinifera]
Length = 955
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/1111 (46%), Positives = 661/1111 (59%), Gaps = 179/1111 (16%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V++ARQCL++E+AR LDDAVGVAR+R H+QTTSLH +SALL PSS LR+AC R +
Sbjct: 1 MPTPVSIARQCLTDEAARALDDAVGVARRRSHAQTTSLHAISALLAFPSSTLRDACARAR 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEFPPISNSLMAAIKRSQAQQRRNPDNYHLQ 120
S + SP+LQFRALEL +GV+ DRLPSSK++E PP+SNSLMAAIKRSQA QRR+P+N+HLQ
Sbjct: 61 SSAYSPRLQFRALELSVGVSLDRLPSSKALEEPPVSNSLMAAIKRSQASQRRHPENFHLQ 120
Query: 121 QIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQP---SVTQFPP 177
Q QTAS L+V+LK+F+L+ILDDP+ SRVFGEAGF S DIK+A+IQP V++FP
Sbjct: 121 Q---QNQTASFLRVELKHFILSILDDPIVSRVFGEAGFRSCDIKIAMIQPPLSPVSRFP- 176
Query: 178 RLSLTRCPPIFLYNLTDSFPGRAGLKLPF----GPDDVDENCRRIGEVLAGRDEKKGKNP 233
TRCPPIFL NLTDS P R PF G D DEN RRIGEVL K GKNP
Sbjct: 177 ---RTRCPPIFLCNLTDSDPARRTFSFPFAGVSGSGDGDENSRRIGEVLT---RKTGKNP 230
Query: 234 LLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKFK 293
LL+GVC++ AL+ F + FVG + + + LK K
Sbjct: 231 LLIGVCSSDALRCFADC---------------------------FVGRGGSEDKLGLKLK 263
Query: 294 EVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWLIGAAM 353
E+ + SGPG+ VN+GELK LV D EAA FVVS+LTSLLK+ LWL+G++
Sbjct: 264 ELGHMAEQYSGPGIAVNFGELKALVGDDAPGEAASFVVSKLTSLLKA--HPNLWLMGSSG 321
Query: 354 SYETYLKMLAKFPGLDNDWDLQLLPIH----------WKSSLMGSFVPFGGFFSSPPDFK 403
SYETYLK L +FP ++ DWDL LLPI +SSLMGSFVPF GFFS+P DFK
Sbjct: 322 SYETYLKFLTQFPSIEEDWDLHLLPITSSRSSVEGFCSRSSLMGSFVPFAGFFSTPTDFK 381
Query: 404 NPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVG 463
NP+ S + TLC+LC EK EQEV+A+LK S+ S+ D+ L S +A DT+KG
Sbjct: 382 NPLNSTNQSITLCHLCNEKCEQEVSAILKGGSTISLADRYSGTLPSWLLMAEPDTNKGAD 441
Query: 464 TAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEFVRLMANRKG 523
KAKDD ALN K++ +Q+KW D CQ LH PK + + L
Sbjct: 442 AVKAKDDGRALNDKVLGVQKKWYDICQRLHHAPPYPKSIFQPVPQIPL------------ 489
Query: 524 SSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPIN-SSTKP 582
P + ES+ +VNFQS+L + S +K
Sbjct: 490 -----PVVSESE-------------------------------SVNFQSKLAGSVSKSKQ 513
Query: 583 QSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKLIDNKEQ 642
P PL +L + TS S + SVTTDLGLG +Y S QE L +KE+
Sbjct: 514 VETRSSPWFSPCPLPNLSLAPDRTSSSCITSVTTDLGLGTLYASNSQETKRLNLQGHKER 573
Query: 643 C--FSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEA 700
FSG + D RD+K+L ALA KVGWQDEA
Sbjct: 574 MNYFSGQM------------------------------DARDFKSLWRALASKVGWQDEA 603
Query: 701 ICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHV 760
IC ISQ VS R GN R GSN K IWL+FLGPDKVGKK+IA+ALAEI+F + L+ V
Sbjct: 604 ICAISQTVSSCRTGNARRHGSNLKGDIWLSFLGPDKVGKKRIAAALAEIMFRSSKSLVSV 663
Query: 761 DVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPI 820
D+ + K RGK + DYI E R KP VVFLE++DK AD +
Sbjct: 664 DLGYQHG------------------KFRGKTITDYIAGELRKKPQLVVFLENIDK-ADLL 704
Query: 821 VQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIILGAK 880
VQ+SL++AI TGKF DS+GR++SI+ MIFV T+T KG ++ PV+FSEE ILGAK
Sbjct: 705 VQTSLSQAIRTGKFPDSHGREISINHMIFVTTATSKKGNRNLVSGKEPVEFSEERILGAK 764
Query: 881 RWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDDGDSPINSQKQVDDSF 940
WQM+ I +A+R +GMN D + K+ +
Sbjct: 765 SWQMKILIGCVTGEASRSNGMN-----------------------QDKYLEMSKRACKAS 801
Query: 941 RSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNFDLLAEKI 1000
SYLDLNLP +E EED S DSD++ E+S AWLE+F DQ D F+P NFD +A+K+
Sbjct: 802 NSYLDLNLPVEELEEDVDSANCDSDSLSESSEAWLEEFLDQMDEKVTFKPFNFDAVAQKL 861
Query: 1001 LREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYEVRRKH 1060
L+EI FQ+ G ++ LEID E++VQILAA WLS++ A+++W+E V+ +SF E R+++
Sbjct: 862 LKEISLNFQKIIGSDIQLEIDSEVMVQILAAAWLSEKGGAVDDWVEQVLSKSFTEARQRY 921
Query: 1061 HFTAGSVVKLVAHEGLLVEEEASGIRLPKII 1091
TA S+VKLV EGL VEE+A G+ LP I
Sbjct: 922 RLTAQSLVKLVPCEGLSVEEQAPGVCLPARI 952
>gi|449455148|ref|XP_004145315.1| PREDICTED: uncharacterized protein LOC101203741 [Cucumis sativus]
Length = 1090
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/1113 (45%), Positives = 687/1113 (61%), Gaps = 44/1113 (3%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V+ ARQCL+EE+AR LDDAV VAR+R H+QTTSLH VSALL +PSS LR+AC R +
Sbjct: 1 MPTPVSAARQCLTEEAARALDDAVSVARRRCHAQTTSLHAVSALLSLPSSALRDACSRAR 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEFPPISNSLMAAIKRSQAQQRRNPDNYHLQ 120
S + P+LQFRAL+L +GV+ DRLPSSK + PP+SNSLMAAIKRSQA QRR+P+++HL
Sbjct: 61 SCAYLPRLQFRALDLSVGVSLDRLPSSKPTDEPPVSNSLMAAIKRSQANQRRHPESFHLH 120
Query: 121 QIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRLS 180
QIH QQT S+LKV+LKYF+L+ILDDP+ SRVFGEAGF S DIKLAI+ P +T R
Sbjct: 121 QIHNQQQTPSILKVELKYFILSILDDPIVSRVFGEAGFRSCDIKLAIMHPPLTHHASRFP 180
Query: 181 LT-RCPPIFLYNLTDSFPGRAGLKLPF----GPDDVDENCRRIGEVLAGRDEKKGKNPLL 235
+ RCPPIFL NLTDS G PF G D D N RRIGE+L K G+NPLL
Sbjct: 181 RSARCPPIFLCNLTDSDLGHRNFPFPFSGGYGNGDDDANTRRIGEILV---RKTGRNPLL 237
Query: 236 VGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKFKEV 295
+GV A AL+ F + + K P +I GL V+C+E EI+EFV G + E M KF+E+
Sbjct: 238 IGVYAADALRSFTDCLQRCKTESLPAEISGLRVICIEKEISEFVSGNGSKETMRSKFEEI 297
Query: 296 ESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWLIGAAMSY 355
+ +CSGPG+VVNYGELK V + +S FVVSQLT LLK NG K+WLIGA +Y
Sbjct: 298 FGMIQQCSGPGIVVNYGELKE-VHNGMS-----FVVSQLTDLLKLYNG-KVWLIGAVGTY 350
Query: 356 ETYLKMLAKFPGLDNDWDLQLLPIH---------WKSSLMGSFVPFGGFFSSPPDFKNPV 406
+ + K LAKF ++ DWDL LLPI KSS MGSFVPFGGFF S +F + +
Sbjct: 351 KMHEKFLAKFSAIEKDWDLHLLPITSKPMVDVFGAKSSFMGSFVPFGGFFPSQSNFPSQL 410
Query: 407 RSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNL-TSSDRIAALDTSKGVGTA 465
S + T C+ CT+K EQEVAA+ K SS + +L S I A K
Sbjct: 411 SSPNQSFTRCHQCTDKFEQEVAAIWKPGSSTVLGHHSESSLHMSPTEIDA--KCKEFDMY 468
Query: 466 KAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEFVRLMANRKGSS 525
K +DD +A++ K++ LQ+KWND C+ LH+ QL PKLDI H E R + + S
Sbjct: 469 KTRDDRSAMSDKVIGLQKKWNDICR-LHQRQLFPKLDISHTMHGVSFESPRFALDHERSG 527
Query: 526 SKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSN 585
+ S+ + P QN + +Q I S+++ NFQS + +S +
Sbjct: 528 EEPSSVTGDRFVIGHPCLSRDLQNNLNTKQTRQISEISDSHTDNFQSNIVSGASPGEAES 587
Query: 586 NDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKLIDNKEQCFS 645
P P L+ S SF+ SVTTDLGLG +Y S + N K++D + Q S
Sbjct: 588 LRIFSKPVVPKGHLHSDKPLPS-SFI-SVTTDLGLGTLYASAGE--NKRKIVDLESQKVS 643
Query: 646 -----GSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEA 700
GS E+ S + +N QSS S G+ D R++K+L AL EKV WQ +A
Sbjct: 644 IQHLTGSNKTEY---SRPSNNNPGQSSGFSDLSAGQVLDIREFKSLWNALNEKVSWQGKA 700
Query: 701 ICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHV 760
+I + + R R G G+ SNS+ IWL FLGPD +GK+KI+ ALAE++FG++ LI V
Sbjct: 701 TSSIVETILRCRTGGGKRRSSNSRGDIWLTFLGPDMMGKRKISFALAELMFGSRENLISV 760
Query: 761 DVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPI 820
D S+ R + NS+FDCQ ++ D + RG+ +VDY+ E R KP SVV LE++DK AD
Sbjct: 761 DFGSQDRDRRHNSLFDCQGLNGYDERFRGQTVVDYVAGELRKKPSSVVLLENVDK-ADVR 819
Query: 821 VQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIILGAK 880
+S L++AI+TGKF DS+GR +I+ IF+ T K S +FSE+ IL A+
Sbjct: 820 AKSCLSQAIATGKFLDSHGRQFTINNTIFLTTLPNKVKKTSNLDSEEQTEFSEDRILAAR 879
Query: 881 RWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDDGDSPINSQKQVDDSF 940
QMQ + +D ++ NV++T S+ S K+++ D+ + + K+ S
Sbjct: 880 NCQMQITVQGFTSDVSKCKNTNVRITSAPRGSSNLSIFKKRKLDNEFTEL---KKASSSS 936
Query: 941 RSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNFDLLAEKI 1000
S+LDLNLP +E E++++ DSD+ E S AW+++F +Q D +F+P NFD AEK+
Sbjct: 937 MSFLDLNLPLEEVEDESNEGDCDSDSASEGSEAWVDEFLEQVDEKIMFKPYNFDEAAEKL 996
Query: 1001 LREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYEVRRKH 1060
++EI +F+R FG EV+LEIDY+I+VQILAA WLS++K A+E W+E V+ RSF E K+
Sbjct: 997 VKEINLQFRRVFGSEVVLEIDYKIIVQILAAKWLSEKKNAMEEWLELVLHRSFVEAEHKY 1056
Query: 1061 HFTAGSVVKLVAHEGLLVEEEASGIRLPKIINV 1093
GSV+KLV E ++E++A+GI LP I +
Sbjct: 1057 QMGCGSVIKLVCKEDCVMEDQAAGIFLPAKIKL 1089
>gi|449472677|ref|XP_004153665.1| PREDICTED: uncharacterized protein LOC101204506 [Cucumis sativus]
Length = 1094
Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/1113 (45%), Positives = 682/1113 (61%), Gaps = 40/1113 (3%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V+ ARQCL+EE+AR LDDAV VAR+R H+QTTSLH VSALL +PSS LR+AC R +
Sbjct: 1 MPTPVSAARQCLTEEAARALDDAVSVARRRCHAQTTSLHAVSALLSLPSSALRDACSRAR 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEFPPISNSLMAAIKRSQAQQRRNPDNYHLQ 120
S + P+LQFRAL+L +GV+ DRLPSSK + PP+SNSLMAAIKRSQA QRR+P+++HL
Sbjct: 61 SCAYLPRLQFRALDLSVGVSLDRLPSSKPTDEPPVSNSLMAAIKRSQANQRRHPESFHLH 120
Query: 121 QIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRLS 180
QIH QQT S+LKV+LKYF+L+ILDDP+ SRVFGEAGF S DIKLAI+ P +T R
Sbjct: 121 QIHNQQQTPSILKVELKYFILSILDDPIVSRVFGEAGFRSCDIKLAIMHPPLTHHASRFP 180
Query: 181 LT-RCPPIFLYNLTDSFPGRAGLKLPF----GPDDVDENCRRIGEVLAGRDEKKGKNPLL 235
+ RCPPIFL NLTDS G PF G D D N RRIGE+L K G+NPLL
Sbjct: 181 RSARCPPIFLCNLTDSDLGHRNFPFPFSGGYGNGDDDANTRRIGEILV---RKTGRNPLL 237
Query: 236 VGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKFKEV 295
+GV A AL+ F + + K P +I GL V+C+E EI+EFV G + E M KF+E+
Sbjct: 238 IGVYAADALRSFTDCLQRCKTESLPAEISGLRVICIEKEISEFVSGNGSKETMRSKFEEI 297
Query: 296 ESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWLIGAAMSY 355
+ +CSGPG+VVNYGELK + FVVSQLT LLK NG K+WLIGA +Y
Sbjct: 298 FGMIQQCSGPGIVVNYGELK--EDEEEVHNGMSFVVSQLTDLLKLYNG-KVWLIGAVGTY 354
Query: 356 ETYLKMLAKFPGLDNDWDLQLLPIH---------WKSSLMGSFVPFGGFFSSPPDFKNPV 406
+ + K LAKF ++ DWDL LLPI KSS MGSFVPFGGFF S +F + +
Sbjct: 355 KMHEKFLAKFSAIEKDWDLHLLPITSKPMVDVFGAKSSFMGSFVPFGGFFPSQSNFPSQL 414
Query: 407 RSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNL-TSSDRIAALDTSKGVGTA 465
S + T C+ CT+K EQEVAA+ K SS + +L S I A K
Sbjct: 415 SSPNQSFTRCHQCTDKFEQEVAAIWKPGSSTVLGHHSESSLHMSPTEIDA--KCKEFDMY 472
Query: 466 KAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEFVRLMANRKGSS 525
K +DD +A++ K++ LQ+KWND C+ LH+ QL PKLDI H E R + + S
Sbjct: 473 KTRDDRSAMSDKVIGLQKKWNDICR-LHQRQLFPKLDISHTMHGVSFESPRFALDHERSG 531
Query: 526 SKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSN 585
+ S+ + P QN + +Q I S+++ NFQS + +S +
Sbjct: 532 EEPSSVTGDRFVIGHPCLSRDLQNNLNTKQTRQISEISDSHTDNFQSNIVSGASPGEAES 591
Query: 586 NDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKLIDNKEQCFS 645
P P L+ S SF+ SVTTDLGLG +Y S + N K++D + Q S
Sbjct: 592 LRIFSKPVVPKGHLHSDKPLPS-SFI-SVTTDLGLGTLYASAGE--NKRKIVDLESQKVS 647
Query: 646 -----GSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEA 700
GS E+ S + +N QSS S G+ D R++K+L AL EKV WQ +A
Sbjct: 648 IQHLTGSNKTEY---SRPSNNNPGQSSGFSDLSAGQVLDIREFKSLWNALNEKVSWQGKA 704
Query: 701 ICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHV 760
+I + + R R G G+ SNS+ IWL FLGPD +GK+KI+ ALAE++FG++ LI V
Sbjct: 705 TSSIVETILRCRTGGGKRRSSNSRGDIWLTFLGPDMMGKRKISFALAELMFGSRENLISV 764
Query: 761 DVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPI 820
D S+ R + NS+FDCQ ++ D + RG+ +VDY+ E R KP SVV LE++DK AD
Sbjct: 765 DFGSQDRDRRHNSLFDCQGLNGYDERFRGQTVVDYVAGELRKKPSSVVLLENVDK-ADVR 823
Query: 821 VQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIILGAK 880
+S L++AI+TGKF DS+GR +I+ IF+ T K S +FSE+ IL A+
Sbjct: 824 AKSCLSQAIATGKFLDSHGRQFTINNTIFLTTLPNKVKKTSNLDSEEQTEFSEDRILAAR 883
Query: 881 RWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDDGDSPINSQKQVDDSF 940
QMQ + +D ++ NV++T S+ S K+++ D+ K+ S
Sbjct: 884 NCQMQITVQGFTSDVSKCKNTNVRITSAPRGSSNLSIFKKRKLDN---EFTELKKASSSS 940
Query: 941 RSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNFDLLAEKI 1000
S+LDLNLP +E E++++ DSD+ E S AW+++F +Q D +F+P NFD AEK+
Sbjct: 941 MSFLDLNLPLEEVEDESNEGDCDSDSASEGSEAWVDEFLEQVDEKIMFKPYNFDEAAEKL 1000
Query: 1001 LREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYEVRRKH 1060
++EI +F+R FG EV+LEIDY+I+VQILAA WLS++K A+E W+E V+ RSF E K+
Sbjct: 1001 VKEINLQFRRVFGSEVVLEIDYKIIVQILAAKWLSEKKNAMEEWLELVLHRSFVEAEHKY 1060
Query: 1061 HFTAGSVVKLVAHEGLLVEEEASGIRLPKIINV 1093
GSV+KLV E ++E++A+GI LP I +
Sbjct: 1061 QMGCGSVIKLVCKEDCVMEDQAAGIFLPAKIKL 1093
>gi|356569527|ref|XP_003552951.1| PREDICTED: uncharacterized protein LOC100776148 [Glycine max]
Length = 1097
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/1139 (45%), Positives = 700/1139 (61%), Gaps = 89/1139 (7%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V+ ARQCL++E+AR LDDAV VAR+R H+QTTSLH VSALL +PS+ LR+AC R +
Sbjct: 1 MPTPVSTARQCLTDEAARALDDAVSVARRRSHAQTTSLHAVSALLSLPSASLRDACSRCR 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKS-------VEFPPISNSLMAAIKRSQAQQRRN 113
S S SP+LQ RALEL +GV+ DRLP++KS E PP+SNSLMAAIKRSQA QRR+
Sbjct: 61 SCSYSPRLQLRALELSVGVSLDRLPTTKSSGGGGGGEEGPPVSNSLMAAIKRSQANQRRH 120
Query: 114 PDNYHLQQIHCNQQ-TASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSV 172
PD++HL Q+ QQ T SLLKV+LK+F+L+ILDDP+ SRVF EAGF S DIKLA++QP
Sbjct: 121 PDSFHLMQMMQQQQQTTSLLKVELKHFILSILDDPIVSRVFAEAGFRSYDIKLALLQPPP 180
Query: 173 TQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDD-VDENCRRIGEVLAGRDEKKGK 231
R+ PP+FL NL P + G F P +DENCRRI EV+A K +
Sbjct: 181 PP--SRIFSRLTPPVFLCNLE---PVQTG---SFQPGSRLDENCRRIVEVVA---RKTKR 229
Query: 232 NPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFV--GGRVNVEMMM 289
NPLL+GV A ++L+ FVE V GK G+ P ++ GL VV VE EI EF+ GGR
Sbjct: 230 NPLLMGVYAKTSLRSFVEVVKNGKGGVLPCELNGLSVVSVEKEIGEFLREGGRGEK---- 285
Query: 290 LKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWLI 349
F+ V V +C G GVVV +GE++V V + FVVSQLT LL +G K+WL+
Sbjct: 286 -IFEHVSRLVEQC-GAGVVVCFGEIEVFVGGNNEEGDVGFVVSQLTRLL-GIHGGKVWLL 342
Query: 350 GAAMSYETYLKMLAKFPGLDNDWDLQLLP----------IHWKSSLMGSFVPFGGFFSSP 399
G A + E Y K L FP +D DWDL LL ++ KSSLMGSFVPFGGFFS+P
Sbjct: 343 GVAGTSEAYSKFLRLFPTVDKDWDLHLLTMTSATPSMEGLYPKSSLMGSFVPFGGFFSTP 402
Query: 400 PDFKNPVRSKSHYSTL--CYLCTEKLEQEVAALLKLESSDSVTDQCLDNL-------TSS 450
+FK+P+ S ++ S+L C C EK EQEVA +LK+ + S + +L S
Sbjct: 403 SEFKSPL-SCTNASSLSRCDSCNEKCEQEVADILKVGPATSASGYSSTSLPWLQKVNVDS 461
Query: 451 DRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDI-RQRSHV 509
DR + ++ + ++ T+LN KI LQRKW+D CQ LH+ + +P+ DI + R
Sbjct: 462 DRRLDVAKNELHHPVQTNEENTSLNKKIFGLQRKWSDICQRLHQNRSLPEFDITKARFQA 521
Query: 510 QLSEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNA-------TIPLS 562
E + GSSSK P E Q N +SQ+ +Q T+ ++
Sbjct: 522 TSHEGFQFGP---GSSSKGPLHSEIQYPNQISYMSKVSQSAFPFKQILPVSVPFDTVSIT 578
Query: 563 SEANNVNFQSRLPINSS-TKPQSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLG 621
EA+++ S+ ++ + P + LL P T+ S L VTTDLGLG
Sbjct: 579 DEADHIPKVSKSHMHGTWISPSPKANMSLLDP------------TTSSSLTPVTTDLGLG 626
Query: 622 KIYPSTRQEANTPKLIDNKE--QCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFD 679
IY S E +TPKL D+K+ S S+S +FDA++E T H + +SSSCS P+ F+
Sbjct: 627 TIYTSAAHEPDTPKLSDHKKPLHHLSDSLSTDFDAMNESTSHQIARSSSCSGPNLEGRFE 686
Query: 680 PRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNG-RDVGSNSKRGIWLAFLGPDKVG 738
D+K+ L EKVGWQDEAI I++ VSR R G R GS+ + IWLAFLGPD++G
Sbjct: 687 TVDFKSFYHLLTEKVGWQDEAIYAINRTVSRCRSCAGKRSSGSHVRADIWLAFLGPDRLG 746
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K+K+ASALAEI+FGNK LI VD+SS+ R NSIF+ QN +C L K ++DY+
Sbjct: 747 KRKVASALAEILFGNKQSLITVDLSSQDRSYPTNSIFEFQNT-YCHDVLMRKTVLDYVAG 805
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
E KP+SVVFLE++D+A D +VQ+SL +AI TGKF S+GR++SI+ +F+ TS++ KG
Sbjct: 806 ELSKKPHSVVFLENVDQA-DFLVQNSLFQAIKTGKFPYSHGREISINNAMFIVTSSVFKG 864
Query: 859 KHSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRR 918
S + P F EE IL AKR QMQ ++ H DA R NVKV RK S
Sbjct: 865 SGSFSLEGDPKMFPEERILEAKRCQMQLSLGHASEDAKRSGCTNVKVAQRKGTSKTTFLN 924
Query: 919 KRKRTDDGDS----PINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAW 974
KRK + GDS + KQV ++ RSYLDLN+P +E EE + ++SD AW
Sbjct: 925 KRKLIESGDSKEKASCKTLKQVGEASRSYLDLNMPLEEVEEGNNYNDYESD-------AW 977
Query: 975 LEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWL 1034
L D DQ D VF+P NFD +AEK+++ I +FQ+ G E +LEI+YE++ QILAA WL
Sbjct: 978 LNDLCDQVDEKVVFKPFNFDSIAEKVIKSIDTQFQKMLGSEFILEIEYEVMTQILAAAWL 1037
Query: 1035 SDRKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIRLPKIINV 1093
SD+KKA+E+W+E+V+ RS E +K+ F V+KLV E + +EE++ G+ LP IN+
Sbjct: 1038 SDKKKAVEDWVEHVLGRSLAEAHQKYRFVPEFVMKLVNCERIFLEEQSPGVCLPARINL 1096
>gi|356498951|ref|XP_003518309.1| PREDICTED: uncharacterized protein LOC100804458 [Glycine max]
Length = 1097
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/1133 (46%), Positives = 693/1133 (61%), Gaps = 77/1133 (6%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V++ARQCL++E+AR LDDAV VAR+R H+QTTSLH +SALL +PSS LR+AC R +
Sbjct: 1 MPTPVSIARQCLTDEAARALDDAVAVARRRSHAQTTSLHAISALLALPSSALRDACGRAR 60
Query: 61 S------YSVSPKLQFRALELCLGVAFDRLPSSKSV-----EFPPISNSLMAAIKRSQAQ 109
S + SP+LQFRALEL +GV+ DRLPSSKS E PP+SNSLMAAIKRSQA
Sbjct: 61 SGAARFSATYSPRLQFRALELSVGVSLDRLPSSKSTAGGSDEEPPVSNSLMAAIKRSQAN 120
Query: 110 QRRNPDNYHL-QQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAII 168
QRR+P+++H+ QQ T S LKV+LK+FVL+ILDDP+ SRVF EAGF S DIKLA++
Sbjct: 121 QRRHPESFHMFQQSQQGTTTTSFLKVELKHFVLSILDDPIVSRVFAEAGFRSCDIKLALL 180
Query: 169 QPSVTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEK 228
QP + R + R PP+FL NL + P DEN RRI EVLA K
Sbjct: 181 QPPLPPVQHRFN--RSPPVFLCNLDPARP--------------DENIRRILEVLA---RK 221
Query: 229 KGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYG--LDVVCVEYEINEFVG-GRVNV 285
+NPLL+GV A +AL+GFVE V G+ G + G L VVC+E EI EFV G
Sbjct: 222 NKRNPLLMGVYAKNALRGFVEMVRNGRGG----SVLGSELRVVCLEREIGEFVKKGGSGE 277
Query: 286 EMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEK 345
E ++ KE+E SG GVVV++GE++V + D V +A RFV S LT LL+ GEK
Sbjct: 278 EKFGVRLKELEQC--ESSGSGVVVSFGEIEVFLGDDVDVDAVRFVFSGLTRLLEI-RGEK 334
Query: 346 LWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI----------HWKSSLMGSFVPFGGF 395
+ L+G A + Y K+L FP ++NDWDL LL + + KSSLMGSFVPFGGF
Sbjct: 335 VSLLGVAETSHAYSKLLGLFPNVENDWDLHLLTVTSATPSMEGLYSKSSLMGSFVPFGGF 394
Query: 396 FSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAA 455
FS+P + ++PV + T C C +K EQEVA LLK+ S S + ++
Sbjct: 395 FSTP-EIRSPVSCTNAPFTRCDTCNKKCEQEVADLLKVGPSSSNSTS----SPWLQKVVN 449
Query: 456 LDTSKGVGTAK--------AKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQ-R 506
++T +G AK ++ T+LN KI+ Q+KWND CQ LH T +P+ DI Q R
Sbjct: 450 VETHRGSDAAKNELHHLVQTNEENTSLNDKILGFQKKWNDICQRLHHTSSLPQFDISQTR 509
Query: 507 SHVQLSEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEAN 566
S E R + K SSSK PS E Q ++ I ++Q ++PL S+
Sbjct: 510 SQSPTLEVSRFGPDFKESSSKDPSHNEFQYSSQISYMPKELHGIFPSKQ-LSVPLPSDTV 568
Query: 567 NVNFQSRLPINSSTKPQSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPS 626
++N + + S Q + P +A+ +H S S VTTDLGLG +Y S
Sbjct: 569 SINTGTDHVLKVSETLQIHMKTPWAAPSLMAN-KSVLDHRSSSSPTRVTTDLGLGTLYTS 627
Query: 627 TRQEANTPKLIDNKE--QCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYK 684
T Q+ +TPKL D ++ Q S S+S + D +E T H +SS CS + FD D+K
Sbjct: 628 TAQDPDTPKLQDQRKHLQRLSDSVSTDCDGTNENTSHRTARSS-CSGSNLEGKFDLADFK 686
Query: 685 TLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIAS 744
+L L EKVGWQD+AI ISQ +S + G G+ GS+ + IWLAFLGPD++GK+KIAS
Sbjct: 687 SLNRLLNEKVGWQDQAIRAISQTLSLCKSGAGKRRGSHGRADIWLAFLGPDRLGKRKIAS 746
Query: 745 ALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKP 804
ALAE +FGN LI VD+ + NS+F+ Q D LR K ++DYI E KP
Sbjct: 747 ALAETIFGNPESLISVDLGFQDGFYPLNSVFEYQKSRCYDV-LRRKTILDYIAGELSKKP 805
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHP 864
+SVVFLE++DKA D +VQ+SL +A+ TGKF+ S+GR +SI+ IFV TST+ KG S
Sbjct: 806 HSVVFLENVDKA-DVLVQNSLLQALRTGKFSYSHGRAISINNTIFVVTSTVCKGNDSFVL 864
Query: 865 QTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTD 924
+ + + FSEE +L AKR QMQ I DA R G NVKV PRK S S KRK+ D
Sbjct: 865 EESKM-FSEERMLEAKRCQMQLLIGRASEDAKRIGGTNVKVVPRKGFSKSSSLNKRKQAD 923
Query: 925 DGDSPINS----QKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFD 980
DS + QKQ ++ RS+LDLN+P +E EE + +S+++ EN+ AWL DFFD
Sbjct: 924 ISDSKEGATSKMQKQDSEASRSFLDLNMPVEEGEEGVNDNDHESESMSENTDAWLSDFFD 983
Query: 981 QTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKA 1040
Q D VF+P NF+ LAE++L+ I FQR FG E+ LEID+E++ ILAA WLSD+K A
Sbjct: 984 QIDEKVVFKPFNFNELAEQVLKRIGMLFQRTFGSELQLEIDHEVIAYILAAAWLSDKKNA 1043
Query: 1041 IENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIRLPKIINV 1093
+E+WIE+V+ + F E ++K+H A VVKLV E + VEE+A + LP IN+
Sbjct: 1044 VEDWIEHVLGKGFVEAQQKYHPAAQYVVKLVNCESIFVEEQAPDVCLPARINM 1096
>gi|357490799|ref|XP_003615687.1| ATP-dependent Clp protease ATP-binding subunit clpL [Medicago
truncatula]
gi|355517022|gb|AES98645.1| ATP-dependent Clp protease ATP-binding subunit clpL [Medicago
truncatula]
Length = 1092
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/1121 (45%), Positives = 683/1121 (60%), Gaps = 58/1121 (5%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V+ ARQ L++E+AR LDDAV VAR+R H+QTTSLH +SALL +PSS LR+A R +
Sbjct: 1 MPTPVSSARQFLTDEAARALDDAVAVARRRSHAQTTSLHTISALLSLPSSSLRDAICRAR 60
Query: 61 SY----SVSPKLQFRALELCLGVAFDRLPSSKS--VEFPPISNSLMAAIKRSQAQQRRNP 114
+ S S +L RALEL +GV+ DRLPSSK VE PP+SNSLMAAIKRSQA QRR+P
Sbjct: 61 TAVRFPSFSHRLHLRALELSVGVSLDRLPSSKPSPVEEPPVSNSLMAAIKRSQANQRRSP 120
Query: 115 DNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQ 174
+++H + N T SLLKV+LK+FVL+ILDDP+ +RVF EAGF S D+KLA++QP V
Sbjct: 121 ESFHF--YNHNGTTPSLLKVELKHFVLSILDDPIVNRVFSEAGFRSCDVKLALLQPPVQS 178
Query: 175 FPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEKKGKNPL 234
LS PP+FL NL PGR GL PF P VDEN RRI EV+A + +K NPL
Sbjct: 179 SSRFLS---SPPVFLCNLE---PGRTGLT-PF-PLGVDENSRRIAEVIAMKGKKM--NPL 228
Query: 235 LVGVCANSALKGFVESVNGGKVGLFPRQ-IYGLDVVCVEYEINEFVGGRVNVEMMMLKFK 293
L+GV A A + FVE + G G + GL VVCVE EI EFV + E M L+FK
Sbjct: 229 LMGVYAKDAFRNFVELLQKGLGGGLFPPGMSGLSVVCVEKEIVEFVKDGGSEEKMGLRFK 288
Query: 294 EVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWLIGAAM 353
EV V +C G GVVV +GE++VLV D V +FVVS+L LL+ GEK+WL+G A
Sbjct: 289 EVGCEVEKCLGAGVVVGFGEIEVLVGDDVDGGCIKFVVSELGRLLEV-YGEKVWLMGVAE 347
Query: 354 SYETYLKMLAKFPGLDNDWDLQLLPI----------HWKSSLMGSFVPFGGFFSSPPDFK 403
+ E Y K L FPG++ DWDL L+ + + KSSLMGSFVPFGGFFS+PP+ K
Sbjct: 348 TSEAYSKFLRLFPGVEKDWDLHLVTVTSATPSMEGLYSKSSLMGSFVPFGGFFSTPPESK 407
Query: 404 NPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVG 463
+P+ S + T C C EK EQEVA K++ + ++ +L ++ +DT G+
Sbjct: 408 SPISSANASFTRCDKCNEKYEQEVADAFKVDPA-TLASNYTTSLPWFKKVVDVDTHGGLD 466
Query: 464 TAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEFVRLMANRKG 523
AK ++ T+LN KI+ Q+KWND CQ LH+ RSHV E +R +
Sbjct: 467 VAKVNEENTSLNDKILGFQKKWNDICQRLHQA----------RSHVPSLEVLRFGSGFNE 516
Query: 524 SSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQS-RLPINSSTKP 582
SSK SL E Q ++P ++ + P+ + +VN + R+P + T+
Sbjct: 517 GSSKDSSLNELQRSSPFSYMPKELHGTFPSKHLSPTPVHTGRVSVNVGTDRVPKVTETQ- 575
Query: 583 QSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPST--RQEANTPKLIDNK 640
Q++ L P +A++ E+ S S L VTTDLGLG +Y ST + +T + D
Sbjct: 576 QNDMTTPWLAPSRMANM-SVLENKSSSSLIPVTTDLGLGTLYTSTPIAHKPDTSEFQDKI 634
Query: 641 E--QCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQD 698
+ + F S SA+ AV+ T H + +SS A + FD D+K+L L EKVGWQ+
Sbjct: 635 KHFEHFPESTSADSVAVNGNTSHKIARSS-FPASNMATKFDSVDFKSLNKLLFEKVGWQN 693
Query: 699 EAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLI 758
+AIC I++ +S + G G+ + + IW AFLGPD++GKKKIASALAE +FGN +I
Sbjct: 694 QAICDINRTLSLHKSGEGKSRDLHGRADIWFAFLGPDRIGKKKIASALAETIFGNTESII 753
Query: 759 HVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAAD 818
+D+ + + PNSIF+CQ D +R K +VDYI E P+SVVFLE++DKA D
Sbjct: 754 SLDLGFQDGLYPPNSIFECQKSLCYDLFIR-KTVVDYIAGELSKNPHSVVFLENVDKA-D 811
Query: 819 PIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIILG 878
+VQSSL +AI GKF DS GR++SI+ IF+ +ST+ KG S + FSEE IL
Sbjct: 812 FLVQSSLLQAIRRGKFPDSRGREISINNAIFLLSSTVCKGNGSSALVEGNL-FSEETILE 870
Query: 879 AKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDDGD----SPINSQK 934
AKR QMQ + DA R NVK+ RK S P KRKR D D + QK
Sbjct: 871 AKRCQMQLLLGDTSEDAKRSFSTNVKIVRRKGFSKPSFMNKRKRADTSDFKEGAASKMQK 930
Query: 935 QVDDSFRSYLDLNLPADEAEE--DTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLN 992
QV ++ S LDLN+P DE EE D + + D + ENS +W DF D+ D VF+P +
Sbjct: 931 QVCETSMSCLDLNMPLDEGEEGMDEDNNDHERDFVVENSDSWFSDFCDKMDEKVVFKPFD 990
Query: 993 FDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRS 1052
FD LAE++L+ I +F++AFG E LE++YE++ QILAA WL+D+K A++NW+E+V+ +
Sbjct: 991 FDALAEQLLKSISIQFEKAFGSEFQLEVNYEVMAQILAAAWLADKKDAVDNWVESVLGKG 1050
Query: 1053 FYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIRLPKIINV 1093
F+E ++K+H VVKLV E + VEE G+ LP IN+
Sbjct: 1051 FFEAQQKYHPVTKYVVKLVNCESIFVEEPDLGVCLPASINL 1091
>gi|356551867|ref|XP_003544294.1| PREDICTED: chaperone protein ClpB-like [Glycine max]
Length = 1075
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/1138 (44%), Positives = 676/1138 (59%), Gaps = 109/1138 (9%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V++ RQCL++E+AR LDDAV VAR+R H+QTTSLH +SALL +PSS LR+AC R +
Sbjct: 1 MPTPVSVVRQCLTDEAARALDDAVAVARRRSHAQTTSLHAISALLALPSSALRDACGRAR 60
Query: 61 S------------YSVSPKLQFRALELCLGVAFDRLPSSKSV----EFPPISNSLMAAIK 104
S + SP+LQFRALEL +GV+ DRLPSSKS E PP+SNSLMAAIK
Sbjct: 61 SGAGAGTSAARFSAAYSPRLQFRALELSVGVSLDRLPSSKSTSAGEEEPPVSNSLMAAIK 120
Query: 105 RSQAQQRRNPDNYHL-QQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDI 163
RSQA QRR+P+++H+ QQ + S LKV+LK+FVL+ILDDP+ SRVF EAGF S DI
Sbjct: 121 RSQANQRRHPESFHMFQQSQQGTASTSFLKVELKHFVLSILDDPIVSRVFAEAGFRSCDI 180
Query: 164 KLAIIQPSVTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLA 223
KLA++QP + R + + PP+FL NL + P DEN RRI EVLA
Sbjct: 181 KLALLQPPLPPVQHRFNWS--PPVFLCNLDPAQP--------------DENIRRIMEVLA 224
Query: 224 GRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYG--LDVVCVEYEINEFVG- 280
K +NPLL+GV A SALKGFVE V G+ G G L VV +E EI EFV
Sbjct: 225 ---RKNKRNPLLMGVYAKSALKGFVEMVRNGRGG----SALGSELRVVRLEREIGEFVKK 277
Query: 281 GRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKS 340
G E ++ KE+E SG GVVV++GE++V V + V + RFVVS LT LL+
Sbjct: 278 GGSGEEKFGVRLKELEQQC-EGSGSGVVVSFGEIEVFVGEDVDVDVVRFVVSGLTRLLEI 336
Query: 341 GNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI----------HWKSSLMGSFV 390
GEK+ L+G A + Y K L FP ++NDWDL LL + + KSSLMGSFV
Sbjct: 337 -RGEKVSLLGVAETSHAYSKFLGLFPNVENDWDLHLLTVTSATPSMEGLYSKSSLMGSFV 395
Query: 391 PFGGFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSS 450
PFGGFFS+P + ++PV S YST +
Sbjct: 396 PFGGFFSTP-EIRSPVDPSSSYSTSSHWL------------------------------- 423
Query: 451 DRIAALDTSKGVGTAKAK--------DDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLD 502
++ +D +G AK + ++ T+LN KI+ Q+KW+D CQ LH T +P+ D
Sbjct: 424 QKVVNMDAHRGSDVAKKELHHPVQTNEENTSLNDKILGFQKKWSDICQRLHHTSSLPQFD 483
Query: 503 IRQ-RSHVQLSEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPL 561
I Q RS E +R K SS+K PS E Q ++ +I ++Q ++PL
Sbjct: 484 ISQTRSQAPTVEVLRFGLAFKESSNKDPSHSEFQYSSQISCMPKELHSIFPSKQ-LSVPL 542
Query: 562 SSEANNVNFQSRLPINSSTKPQSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLG 621
S+ +N + S Q + + + P +A+ +H S SF VTTDLGLG
Sbjct: 543 PSDTVCINTGTDHVPKVSETLQIHMNTPWVAPSLMAN-KSALDHRSSSFRTPVTTDLGLG 601
Query: 622 KIYPSTRQEANTPKLIDNKE--QCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFD 679
+Y ST Q+ +TPKL D ++ Q S S+S + D ++E T H + + S CS + FD
Sbjct: 602 TLYTSTAQDPDTPKLQDQRKHLQHLSDSVSTDCDGMNENTSHRIARFS-CSGSNLEGKFD 660
Query: 680 PRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGK 739
D+K+L L EKVGWQD+AIC ISQ +S + G G+ GSN + IWLAFLGPD++GK
Sbjct: 661 LADFKSLDRLLTEKVGWQDQAICAISQTLSLCKSGAGKRRGSNGRADIWLAFLGPDRLGK 720
Query: 740 KKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQE 799
+KIAS LAE +FGN LI VD+ + NS+F+ Q C LR K ++DYI E
Sbjct: 721 RKIASVLAETIFGNPESLISVDLGFQDSFYPLNSVFEYQK-SRCYDVLRRKTILDYIAGE 779
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
KP+SVVFLE++DKA D +VQ+SL +A+ TGKF+ S+GR +SI+ IF+ TST+ KG
Sbjct: 780 LSKKPHSVVFLENVDKA-DVLVQNSLLQAVRTGKFSYSHGRVISINNTIFLVTSTVCKGN 838
Query: 860 HSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRK 919
S + + + FSEE IL AKR QMQ + H DA R NVKV P K S S K
Sbjct: 839 GSFVLEESKM-FSEERILEAKRCQMQLLLGHASEDAGRIGSTNVKVVPGKGFSKSSSLNK 897
Query: 920 RKRTDDGDSPINS----QKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWL 975
RK+ D DS + QKQ ++ RSYLDLN+P ++ EE + + +S++I EN+ AWL
Sbjct: 898 RKQADISDSKEGATSKMQKQDSEASRSYLDLNMPVEDGEEGVNDDH-ESESITENTDAWL 956
Query: 976 EDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLS 1035
DFFDQ D VF+ NFD LAE++L+ I FQR FG E+ LEIDYE++ ILAA WLS
Sbjct: 957 SDFFDQIDEKVVFKSFNFDELAEEVLKRIGMLFQRTFGSELQLEIDYEVITHILAAAWLS 1016
Query: 1036 DRKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIRLPKIINV 1093
D+K A+E+W+E+V+ + F E ++K+ A VVKLV E + VEE+A + LP IN
Sbjct: 1017 DKKNAVEDWVEHVLGKGFVEAQQKYLPAAQYVVKLVNCESIFVEEQAPDVCLPARINT 1074
>gi|225448447|ref|XP_002272110.1| PREDICTED: uncharacterized protein LOC100260392 [Vitis vinifera]
Length = 1105
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/1130 (42%), Positives = 663/1130 (58%), Gaps = 67/1130 (5%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V+LARQCL+ E+A LD+AVGVAR+R H+QTTSLH VSA+L +PSSLLR+AC R +
Sbjct: 1 MPTSVSLARQCLTPEAAHALDEAVGVARRRGHAQTTSLHAVSAMLSLPSSLLRDACARAR 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEFPPISNSLMAAIKRSQAQQRRNPDNY--H 118
+ + S +LQF+ALELCL V+ DR+PS++ + PP+SNSLMAAIKRSQA QRR P+N+ +
Sbjct: 61 NSAYSARLQFKALELCLSVSLDRVPSTQLADDPPVSNSLMAAIKRSQANQRRQPENFQLY 120
Query: 119 LQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPR 178
Q + + S +KV+L++ +L+ILDDP+ SRVFGEAGF S DIKLAI++P R
Sbjct: 121 QQLQQQSSSSISCIKVELQHLILSILDDPVVSRVFGEAGFRSCDIKLAIVRPLPQLL--R 178
Query: 179 LSLTRCPPIFLYNLTDSFPGRAGLKLPF-GPDDVDENCRRIGEVLAGRDEKKGKNPLLVG 237
S +R PP+FL N DS P R P+ G DENC+RIGEVL GR KG+NPLLVG
Sbjct: 179 YSRSRGPPLFLCNFIDSDPSRRSFSFPYSGFFTGDENCKRIGEVL-GRG--KGRNPLLVG 235
Query: 238 VCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKFKEVES 297
VCA AL+ F E V G+ + P +I GL ++C+E ++ F + ++ +F+EV
Sbjct: 236 VCAYDALQSFTEMVEKGRYNILPVEISGLSIICIEKDVLRFFNENCDQGLINSRFEEVGV 295
Query: 298 AVGRCSGPGVVVNYGELKVLVS-DSVSTEAARFVVSQLTSLLKSGNGEKLWLIGAAMSYE 356
V C G G+VVN+G+LKV + D S +VVSQLT LL+ +G K+ L+GA SYE
Sbjct: 296 LVQHCLGAGLVVNFGDLKVFIDRDDASVGVVSYVVSQLTRLLEI-HGGKVRLMGAVSSYE 354
Query: 357 TYLKMLAKFPGLDNDWDLQLLPI----------HWKSSLMGSFVPFGGFFSSPPDFKNPV 406
TYLK L ++P ++ DWDLQLLPI + +SSLM SFVP GGFFSSP + K +
Sbjct: 355 TYLKFLNRYPSIEKDWDLQLLPITSLRPPMGEPYARSSLMESFVPLGGFFSSPCELKGQL 414
Query: 407 RSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVGTAK 466
+++ C+ C EK EQEVAAL K + SV DQ NL + ++A L S AK
Sbjct: 415 SGSYQFTSRCHQCNEKCEQEVAALSKGGFTASVADQYQPNLPAWLQMAELGKSTAFDVAK 474
Query: 467 AKDD-VTALNAKIMELQRKWNDTCQSLHRTQLVPKLDI-RQRSHV------QLSEFVRLM 518
AKDD + LNAKIM LQ+KW++ CQ L TQ PK D R S V Q + +
Sbjct: 475 AKDDGMLLLNAKIMGLQKKWDNICQRLQHTQPFPKADFYRVGSQVPSVVGFQAVKDSKEN 534
Query: 519 ANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPINS 578
A+ SS S +S C + + M Q + + + +PL S+ N +F S+L
Sbjct: 535 ADNHRSSKTNASPSDSGCKHANSCVSMDLQKVPESTPSTPLPLVSK--NESFLSKL---- 588
Query: 579 STKPQSNNDEH---LLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPK 635
+ S +EH L L+ TS + + SVTTDLGLG YP ++Q K
Sbjct: 589 -FEKSSKTEEHEPGSLQSRTLSTSSVGDGRTSPTSVNSVTTDLGLGLFYPPSKQLKKDAK 647
Query: 636 ------LIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIA 689
L D FS A D V+ + S + G+ D RD+KTL A
Sbjct: 648 QTHLGPLPD-----FSSRYPANVDLVNGSISNPSSSCSCPDS--WGQS-DQRDFKTLFRA 699
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L E++ WQ EAI IS+ ++ R+GN + G++ K IW F+GPD+ KKKIA ALAEI
Sbjct: 700 LTERIDWQHEAISVISETIAHCRLGNEKRHGASPKGDIWFNFVGPDRFSKKKIAVALAEI 759
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
++G + I VD+SS+ + ++ Q ++ + K RGK +VDYI E KP SVVF
Sbjct: 760 LYGRRESFICVDLSSQDGMIHKSANHGSQEMNGYNVKFRGKNVVDYIAGELSKKPLSVVF 819
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPV 869
LE++D+ AD + ++SL AI+TGKF DS+GR+VSI+ FV T+ +G + P
Sbjct: 820 LENVDQ-ADLLARNSLFHAINTGKFCDSHGREVSINNATFVTTARFRQGDKVLSSGKEPA 878
Query: 870 KFSEEIILGAKRWQMQTAISHGFADAAR---GSGMNVKVTPRKENSNPESRRKRKRTDDG 926
K+SEE I AK MQ I + + G +++ +T SN KRK
Sbjct: 879 KYSEERISRAKGLPMQILIGYSHREDDHDNFGHSLSLSITTNNGISNQIFLNKRKLVGSS 938
Query: 927 DSPINSQ-----KQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQ 981
++ S+ K+ + +YLDLNLPA+E E D+D + N +WL+ F DQ
Sbjct: 939 ETLEQSETSEMAKRAHKASNTYLDLNLPAEENEGQ------DADHVDPNPRSWLQHFSDQ 992
Query: 982 TDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAI 1041
D VF+P +FD LAEK+LREI F G E LLEI+ +++ QILAA SDR A+
Sbjct: 993 IDETVVFKPFDFDALAEKVLREISKTFHETIGPESLLEINTKVMEQILAAACSSDRTGAV 1052
Query: 1042 ENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIRLPKII 1091
+W+E V+ R F E R++++ TA VVKLV EG+ +E++A G+ LP I
Sbjct: 1053 GDWVEQVLSRGFAEARKRYNLTAHCVVKLVPCEGIFMEDQAPGVWLPSRI 1102
>gi|297849012|ref|XP_002892387.1| hypothetical protein ARALYDRAFT_311783 [Arabidopsis lyrata subsp.
lyrata]
gi|297338229|gb|EFH68646.1| hypothetical protein ARALYDRAFT_311783 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/1128 (41%), Positives = 624/1128 (55%), Gaps = 187/1128 (16%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREAC--DR 58
M T VT AR+CL+EE+AR LDDAV VAR+R H+QTTSLH VSALL +PSS+LRE C
Sbjct: 1 MPTPVTTARECLTEEAARALDDAVAVARRRSHAQTTSLHAVSALLAMPSSILREVCVSRA 60
Query: 59 VQSYSVSPKLQFRALELCLGVAFDRLPSSKS---VEFPPISNSLMAAIKRSQAQQRRNPD 115
+S S +LQFRALELC+GV+ DRLPSSKS E PP+SNSLMAAIKRSQA QRR+P+
Sbjct: 61 ARSTPYSSRLQFRALELCVGVSLDRLPSSKSPATEEDPPVSNSLMAAIKRSQANQRRHPE 120
Query: 116 NYHLQQIHCNQQ-----TASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQP 170
YHLQQIH + ++LKV+LKYF+L+ILDDP+ +RVFGEAGF S DIKL ++ P
Sbjct: 121 TYHLQQIHASNNGGGGCQTTVLKVELKYFILSILDDPIVNRVFGEAGFRSSDIKLDVLHP 180
Query: 171 SVTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPF-GPDDVDENCRRIGEVLAGRDEKK 229
VTQF R S RCPP+FL NL +S P R + PF G DEN RRIGEVL +D+
Sbjct: 181 PVTQFSSRFSRGRCPPLFLCNLPNSDPNR---EFPFCGSSGFDENSRRIGEVLGRKDK-- 235
Query: 230 GKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVG-GRVNVEMM 288
KNPLLVG CAN ALK F +S+N GK+G P I GL ++ +E EI+E + G N E +
Sbjct: 236 -KNPLLVGNCANEALKTFTDSINTGKLGFLPMDISGLSLISIEKEISEILADGSKNEEEI 294
Query: 289 MLKFKEVESAVGR-CSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLW 347
+K ++ V + S G+++N GELKVL S+ + A +VS+L+ LLK +KLW
Sbjct: 295 RVKVDDLGRIVEQNGSKSGIMLNLGELKVLTSE--ANAALENLVSKLSDLLKH-QSKKLW 351
Query: 348 LIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI-----------HWKSSLMGSFVPFGGFF 396
IG S ETY K++ +FP ++ DWDL +LPI + KSSLMGSFVPFGGFF
Sbjct: 352 FIGCVSSNETYTKLIDRFPTIEKDWDLHVLPITASTKPSSQGVYPKSSLMGSFVPFGGFF 411
Query: 397 SSPPDFKNPVRSKSHYS-TLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAA 455
SS DF+ P+ S + + + C+LC EK QEVAA+LK SS S+ DQC + L R
Sbjct: 412 SSTSDFRVPLSSTVNQTLSRCHLCNEKYLQEVAAVLKASSSLSLADQCSEKLPPWLRAVE 471
Query: 456 LDTSKG-VGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEF 514
KG G++KA DD ++ LQ+KW++ CQS+H T +PKL
Sbjct: 472 TKEDKGTTGSSKALDDANTSASQTAALQKKWDNICQSIHHTPAIPKLGF----------- 520
Query: 515 VRLMANRKGSSSKYPSLCESQCTNPSP---GAHMLSQNISSAEQNATIPLSSEANNVNFQ 571
+ SS++P E P+ + +L+ IS
Sbjct: 521 -------QSVSSQFPVQTEKSVRTPTSFLETSKLLNPPIS-------------------- 553
Query: 572 SRLPINSSTKPQSNNDEHLLPPHPLADLYKP-HEHTSFSFLASVTTDLGLGKIYPSTRQE 630
KP+ P+ DL T S L+ VTTD GLG IY S QE
Sbjct: 554 ---------KPK-----------PMEDLTTSVTNRTVSSPLSCVTTDFGLGVIYASKNQE 593
Query: 631 ANTPKLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIAL 690
+ T +E+ ++++ + HT + +D+K+LR L
Sbjct: 594 SKTA-----REKPLLVTLNSSLE-------------------HTYQ----KDFKSLRELL 625
Query: 691 AEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIV 750
+ KV WQ EA+ ISQ + + + R N GIWLA LGPDKVGKKK+A AL+E+
Sbjct: 626 SRKVAWQTEAVNAISQIICGCKTDSTR---RNQASGIWLALLGPDKVGKKKVAMALSEVF 682
Query: 751 FGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFL 810
FG + I VD +E C F D K RGK +VDYI E KP+SVV L
Sbjct: 683 FGGQVNCICVDFGAEH----------C----FLDDKFRGKTVVDYITAELSRKPHSVVLL 728
Query: 811 EDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVK 870
E+++KA P Q L++A+STGK DS+GR +S+ +I VATS I K + H T PVK
Sbjct: 729 ENVEKADFPD-QMRLSEAVSTGKIRDSHGRVISMKNVIVVATSGIAKDNATDH-VTKPVK 786
Query: 871 FSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDDGDSPI 930
F E+ +L A+ W++Q + G + V RK E R + +
Sbjct: 787 FPEDQVLSARSWKLQIKL---------GDSTKIGVNKRKHELETEQRAVKVQ-------- 829
Query: 931 NSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQP 990
RSYLDLNLP +E E E DS+T W +DF +Q D F+P
Sbjct: 830 ----------RSYLDLNLPVNETEVSLDHETEDSNT-------WFDDFIEQVDGKVTFKP 872
Query: 991 LNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWL-----SDRKKAIENWI 1045
++FD LA+ I +I F+R FG E LE+D E+++QILAA+W + K ++ W+
Sbjct: 873 VDFDGLAKNIQEKISSHFERCFGSETHLELDQEVIIQILAASWSSLSSDEEEGKTVDQWM 932
Query: 1046 ENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIRLPKIINV 1093
+ V+ SF E ++K+ VKLVA L ASGI LP ++V
Sbjct: 933 QTVLAPSFAEAKQKYGSNPMLAVKLVASSSGL----ASGIELPAKVDV 976
>gi|14532596|gb|AAK64026.1| unknown protein [Arabidopsis thaliana]
Length = 1002
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/1114 (42%), Positives = 633/1114 (56%), Gaps = 149/1114 (13%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T VT ARQCL+EE+AR LDDAV VAR+R H+QTTSLH VS LL +PSS+LRE C
Sbjct: 1 MPTPVTTARQCLTEETARALDDAVSVARRRSHAQTTSLHAVSGLLTMPSSILREVCISRA 60
Query: 61 SYSV--SPKLQFRALELCLGVAFDRLPSSKSV------EFPPISNSLMAAIKRSQAQQRR 112
+++ S +LQFRALELC+GV+ DRLPSSKS E PP+SNSLMAAIKRSQA QRR
Sbjct: 61 AHNTPYSSRLQFRALELCVGVSLDRLPSSKSTPTTTVEEDPPVSNSLMAAIKRSQATQRR 120
Query: 113 NPDNYHLQQIHCNQ--QTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQP 170
+P+ YHL QIH N +T S+LKV+LKYF+L+ILDDP+ SRVFGEAGF S DIKL ++ P
Sbjct: 121 HPETYHLHQIHGNNNTETTSVLKVELKYFILSILDDPIVSRVFGEAGFRSTDIKLDVLHP 180
Query: 171 SVT-QFPPRL-SLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEK 228
VT QF R S +R PP+FL NL +S GR PFG D+DENCRRIGEVLA +D+
Sbjct: 181 PVTSQFSSRFTSRSRIPPLFLCNLPESDSGRVRFGFPFG--DLDENCRRIGEVLARKDK- 237
Query: 229 KGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMM 288
KNPLLVGVC ALK F +S+N GK G P +I GL VV ++ G R+++
Sbjct: 238 --KNPLLVGVCGVEALKTFTDSINRGKFGFLPLEISGLSVVSIKISEVLVDGSRIDI--- 292
Query: 289 MLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWL 348
KF + +GR G+V+N GELKVL SD S + V +L LLK + EKLW
Sbjct: 293 --KFDD----LGRLKS-GMVLNLGELKVLASDVFSVDVIEKFVLKLADLLKL-HREKLWF 344
Query: 349 IGAAMSYETYLKMLAKFPGLDNDWDLQLLPI-------HWKSSLMGSFVPFGGFFSSPPD 401
IG+ S ETYLK++ +FP +D DW+L LLPI + KSSLMGSFVPFGGFFSS D
Sbjct: 345 IGSVSSNETYLKLIERFPTIDKDWNLHLLPITSSSQGLYPKSSLMGSFVPFGGFFSSTSD 404
Query: 402 FKNPVRSKSHYSTL--CYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTS 459
F+ P S S TL C+LC EK EQEV A K S + DQC + L S R +
Sbjct: 405 FRIP-SSSSMNQTLPRCHLCNEKYEQEVTAFAK--SGSMIDDQCSEKLPSWLRNVEHEHE 461
Query: 460 KGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLD---IRQRSHVQLSEFVR 516
KG K KDD L ++I LQ+KW+D CQ +H+T PKL +R + +QL
Sbjct: 462 KG-NLGKVKDDPNVLASRIPALQKKWDDICQRIHQTPAFPKLSFQPVRPQFPLQL----- 515
Query: 517 LMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPI 576
GSSS +++ + SP ++ S + FQ + +
Sbjct: 516 ------GSSS------QTKMSLGSPTEKIVCTRTSES----------------FQGMVAL 547
Query: 577 NSSTKPQSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKL 636
+ Q + P DL ++ SF VTTDLGLG IY S QE +TP
Sbjct: 548 PQNPPHQPGLSVKISKPKHTEDLSSSTTNSPLSF---VTTDLGLGTIYASKNQEPSTPVS 604
Query: 637 IDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGW 696
++ + +F+ + E + S C +D+K+LR L+ KVG+
Sbjct: 605 VERR----------DFEVIKEKQL--LSASRYC-----------KDFKSLRELLSRKVGF 641
Query: 697 QDEAICTISQAVSRWRIGNGR---DVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGN 753
Q+EA+ IS+ V +R + R V + S +WLA LGPDK GKKK+A ALAE+ G
Sbjct: 642 QNEAVNAISEIVCGYRDESRRRNNHVATTS--NVWLALLGPDKAGKKKVALALAEVFCGG 699
Query: 754 KGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDL 813
+ I VD S+ D D + RGK +VDYI E + SVVF+E++
Sbjct: 700 QDNFICVDFKSQ---------------DSLDDRFRGKTVVDYIAGEVARRAGSVVFIENV 744
Query: 814 DKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSE 873
+KA P Q L++A+ TGK DS+GR++S+ +I VAT + H PVK+SE
Sbjct: 745 EKAEFPD-QIRLSEAMRTGKLRDSHGREISMKNVIVVATISGSDKASDCHVLEEPVKYSE 803
Query: 874 EIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDDGDSPINSQ 933
E +L AK W +Q + AD + NV N N ++R+++ + + + +
Sbjct: 804 ERVLNAKNWTLQIKL----ADTS-----NV-------NKNGPNKRRQEEAETEVTELRAL 847
Query: 934 KQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNF 993
K S RS+LDLNLP DE E + ++ T+ EN+ AWLEDF +Q D F+ ++F
Sbjct: 848 K----SQRSFLDLNLPVDEIEANED----EAYTMSENTEAWLEDFVEQVDGKVTFKLIDF 899
Query: 994 DLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAAT-WLSDRKKAIENWIENVVLRS 1052
D LA+ I R I F +FG E LEI+ +++++ILAA W SD +K + W++ V+ S
Sbjct: 900 DELAKNIKRNILSLFHLSFGPETHLEIENDVILKILAALRWSSDEEKTFDQWLQTVLAPS 959
Query: 1053 FYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIR 1086
F + R+K A VKLVA EEE +GI+
Sbjct: 960 FAKARQKCVPAAPFSVKLVASRESPAEEETTGIQ 993
>gi|18402202|ref|NP_565689.1| double Clp-N motif-containing P-loop nucleoside triphosphate
hydrolase domain-containing protein [Arabidopsis
thaliana]
gi|3420054|gb|AAC31855.1| expressed protein [Arabidopsis thaliana]
gi|330253235|gb|AEC08329.1| double Clp-N motif-containing P-loop nucleoside triphosphate
hydrolase domain-containing protein [Arabidopsis
thaliana]
Length = 1002
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/1114 (42%), Positives = 633/1114 (56%), Gaps = 149/1114 (13%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T VT ARQCL+EE+AR LDDAV VAR+R H+QTTSLH VS LL +PSS+LRE C
Sbjct: 1 MPTPVTTARQCLTEETARALDDAVSVARRRSHAQTTSLHAVSGLLTMPSSILREVCISRA 60
Query: 61 SYSV--SPKLQFRALELCLGVAFDRLPSSKSV------EFPPISNSLMAAIKRSQAQQRR 112
+++ S +LQFRALELC+GV+ DRLPSSKS E PP+SNSLMAAIKRSQA QRR
Sbjct: 61 AHNTPYSSRLQFRALELCVGVSLDRLPSSKSTPTTTVEEDPPVSNSLMAAIKRSQATQRR 120
Query: 113 NPDNYHLQQIHCNQ--QTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQP 170
+P+ YHL QIH N +T S+LKV+LKYF+L+ILDDP+ SRVFGEAGF S DIKL ++ P
Sbjct: 121 HPETYHLHQIHGNNNTETTSVLKVELKYFILSILDDPIVSRVFGEAGFRSTDIKLDVLHP 180
Query: 171 SVT-QFPPRL-SLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEK 228
VT QF R S +R PP+FL NL +S GR PFG D+DENCRRIGEVLA +D+
Sbjct: 181 PVTSQFSSRFTSRSRIPPLFLCNLPESDSGRVRFGFPFG--DLDENCRRIGEVLARKDK- 237
Query: 229 KGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMM 288
KNPLLVGVC ALK F +S+N GK G P +I GL VV ++ G R+++
Sbjct: 238 --KNPLLVGVCGVEALKTFTDSINRGKFGFLPLEISGLSVVSIKISEVLVDGSRIDI--- 292
Query: 289 MLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWL 348
KF + +GR G+V+N GELKVL SD S + V +L LLK + EKLW
Sbjct: 293 --KFDD----LGRLKS-GMVLNLGELKVLASDVFSVDVIEKFVLKLADLLKL-HREKLWF 344
Query: 349 IGAAMSYETYLKMLAKFPGLDNDWDLQLLPI-------HWKSSLMGSFVPFGGFFSSPPD 401
IG+ S ETYLK++ +FP +D DW+L LLPI + KSSLMGSFVPFGGFFSS D
Sbjct: 345 IGSVSSNETYLKLIERFPTIDKDWNLHLLPITSSSQGLYPKSSLMGSFVPFGGFFSSTSD 404
Query: 402 FKNPVRSKSHYSTL--CYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTS 459
F+ P S S TL C+LC EK EQEV A K S + DQC + L S R +
Sbjct: 405 FRIP-SSSSMNQTLPRCHLCNEKYEQEVTAFAK--SGSMIDDQCSEKLPSWLRNVEHEHE 461
Query: 460 KGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLD---IRQRSHVQLSEFVR 516
KG K KDD L ++I LQ+KW+D CQ +H+T PKL +R + +QL
Sbjct: 462 KG-NLGKVKDDPNVLASRIPALQKKWDDICQRIHQTPAFPKLSFQPVRPQFPLQL----- 515
Query: 517 LMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPI 576
GSSS +++ + SP ++ S + FQ + +
Sbjct: 516 ------GSSS------QTKMSLGSPTEKIVCTRTSES----------------FQGMVAL 547
Query: 577 NSSTKPQSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKL 636
+ Q + P DL ++ SF VTTDLGLG IY S QE +TP
Sbjct: 548 PQNPPHQPGLSVKISKPKHTEDLSSSTTNSPLSF---VTTDLGLGTIYASKNQEPSTPVS 604
Query: 637 IDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGW 696
++ + +F+ + E + S C +D+K+LR L+ KVG+
Sbjct: 605 VERR----------DFEVIKEKQL--LSASRYC-----------KDFKSLRELLSRKVGF 641
Query: 697 QDEAICTISQAVSRWRIGNGR---DVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGN 753
Q+EA+ IS+ V +R + R V + S +WLA LGPDK GKKK+A ALAE+ G
Sbjct: 642 QNEAVNAISEIVCGYRDESRRRNNHVATTS--NVWLALLGPDKAGKKKVALALAEVFCGG 699
Query: 754 KGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDL 813
+ I VD S+ D D + RGK +VDYI E + SVVF+E++
Sbjct: 700 QDNFICVDFKSQ---------------DSLDDRFRGKTVVDYIAGEVARRADSVVFIENV 744
Query: 814 DKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSE 873
+KA P Q L++A+ TGK DS+GR++S+ +I VAT + H PVK+SE
Sbjct: 745 EKAEFPD-QIRLSEAMRTGKLRDSHGREISMKNVIVVATISGSDKASDCHVLEEPVKYSE 803
Query: 874 EIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDDGDSPINSQ 933
E +L AK W +Q + AD + NV N N ++R+++ + + + +
Sbjct: 804 ERVLNAKNWTLQIKL----ADTS-----NV-------NKNGPNKRRQEEAETEVTELRAL 847
Query: 934 KQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNF 993
K S RS+LDLNLP DE E + ++ T+ EN+ AWLEDF +Q D F+ ++F
Sbjct: 848 K----SQRSFLDLNLPVDEIEANED----EAYTMSENTEAWLEDFVEQVDGKVTFKLIDF 899
Query: 994 DLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAAT-WLSDRKKAIENWIENVVLRS 1052
D LA+ I R I F +FG E LEI+ +++++ILAA W SD +K + W++ V+ S
Sbjct: 900 DELAKNIKRNILSLFHLSFGPETHLEIENDVILKILAALRWSSDEEKTFDQWLQTVLAPS 959
Query: 1053 FYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIR 1086
F + R+K A VKLVA EEE +GI+
Sbjct: 960 FAKARQKCVPAAPFSVKLVASRESPAEEETTGIQ 993
>gi|297822717|ref|XP_002879241.1| hypothetical protein ARALYDRAFT_481905 [Arabidopsis lyrata subsp.
lyrata]
gi|297325080|gb|EFH55500.1| hypothetical protein ARALYDRAFT_481905 [Arabidopsis lyrata subsp.
lyrata]
Length = 1007
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/1116 (42%), Positives = 625/1116 (56%), Gaps = 148/1116 (13%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T VT ARQCL+EE+AR LDDAV VAR+R H+QTTSLH VS LL +PSS+LRE C
Sbjct: 1 MPTPVTTARQCLTEETARALDDAVSVARRRSHAQTTSLHAVSGLLTMPSSILREVCISRA 60
Query: 61 SYSV--SPKLQFRALELCLGVAFDRLPSSKSV-----------EFPPISNSLMAAIKRSQ 107
+++ S LQFRALELC+GV+ DRLPSSKS E PP+SNSLMAAIKRSQ
Sbjct: 61 AHNTPYSSCLQFRALELCVGVSLDRLPSSKSPPPPTTTTTTVEEDPPVSNSLMAAIKRSQ 120
Query: 108 AQQRRNPDNYHLQQIHCNQ---QTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIK 164
A QRR+P+ YHL QIH N QT S+LKV+LKYF+L+ILDDP+ SRVFGEAGF S DIK
Sbjct: 121 ATQRRHPETYHLHQIHGNNNNTQTTSVLKVELKYFILSILDDPIVSRVFGEAGFRSTDIK 180
Query: 165 LAIIQPSVTQFPPRLSLTR--CPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVL 222
L ++ P VT +R PP+FL NL +S PGR P G D+DENCRRIGEVL
Sbjct: 181 LDVLHPPVTSQFSSRFSSRSRIPPLFLCNLPESDPGRVRFGFPLG--DLDENCRRIGEVL 238
Query: 223 AGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGR 282
+D+K NPLLVGVC ALK F +S+N GK G P +I GL VV +E G R
Sbjct: 239 GRKDKK---NPLLVGVCGGEALKTFTDSINRGKFGFLPLEISGLSVVSIEISEVLVDGSR 295
Query: 283 VNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGN 342
+++ KF ++ GR G+V+N GELKVL SD S V +L+ LLK +
Sbjct: 296 IDI-----KFDDL----GRLKS-GMVLNLGELKVLTSDVFSVSVVEKFVLKLSDLLKL-H 344
Query: 343 GEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI-------HWKSSLMGSFVPFGGF 395
EKLW IG+ S ETYLK++ KFP +D DW+L LLPI + KSSLMGSFVPFGGF
Sbjct: 345 SEKLWFIGSVSSNETYLKLIEKFPMIDKDWNLHLLPITSSSQGVYPKSSLMGSFVPFGGF 404
Query: 396 FSSPPDFKNPVRSKSHYST-LCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIA 454
FSS DF+ P + + S C+LC EK EQEV A K S S+ DQC + L S R
Sbjct: 405 FSSTSDFRVPFSNSMNQSLPRCHLCNEKYEQEVTAFAK--SGSSLDDQCSEKLPSWLRNV 462
Query: 455 ALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLD---IRQRSHVQL 511
+ KG K KDD L ++I LQ+KW+D CQ +H+T PKL +R + +QL
Sbjct: 463 EHEQDKG-SLGKVKDDPNVLVSRIPALQKKWDDICQRIHQTPAFPKLSFQPVRPQFPLQL 521
Query: 512 SEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQ 571
SS SL S Q++ S + + +++ N Q
Sbjct: 522 V----------SSSQSKMSLGSST-----------EQSVRSIRTSESFQGTAQVQNPPHQ 560
Query: 572 SRLPINSSTKPQSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEA 631
L + S KP D T+ S L+ VTTDLGLG IY S Q++
Sbjct: 561 PGLSLKIS-KPTHTED--------------LTSRTTNSPLSCVTTDLGLGTIYASKNQDS 605
Query: 632 NTPKLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALA 691
NTP ++ K+ F + + S AP +D+K+LR L+
Sbjct: 606 NTPVSLERKD------------------FEVIKEKQSLVAPRYC-----KDFKSLRELLS 642
Query: 692 EKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
KVG+Q+EA+ IS+ V +R + R + +WLA LGPDK GKKK+ASALA++
Sbjct: 643 RKVGFQNEAVNAISEIVCGYRDESRRRNNIATTSNVWLALLGPDKAGKKKVASALADVFC 702
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
+ I VD S+ D D + RGK +VDYI E ++ SVVF+E
Sbjct: 703 SGQDNFICVDFKSQ---------------DNLDDRFRGKTVVDYIASEVATRADSVVFIE 747
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKF 871
+++KA P Q L+ A+ TGK DS+GR++S+ +I VAT + H PVK+
Sbjct: 748 NVEKAEFPD-QIRLSDAMRTGKLRDSHGREISMKNVIVVATISGSDKDSDCHVLEEPVKY 806
Query: 872 SEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDDGDSPIN 931
SEE +L AK W++Q + AD + NV N N ++R+++ + + +
Sbjct: 807 SEERVLSAKNWKLQIKL----ADTS-----NV-------NKNGLNKRRQEEAETEMTELR 850
Query: 932 SQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPL 991
+ K S RS+LDLNLP DE E + ++ T+ EN+ AWLEDF +Q D F+ +
Sbjct: 851 ALK----SQRSFLDLNLPVDEIEANED----EAYTMSENTEAWLEDFVEQVDGKVTFKLI 902
Query: 992 NFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAAT-WLSDRKKAIENWIENVVL 1050
+FD LA+ I R I F R+FG E LEI+ + +++IL A W SD +K + W++NV+
Sbjct: 903 DFDELAKNIKRNIISLFHRSFGPETHLEIENDAILKILGALRWSSDEEKTFDQWLQNVLA 962
Query: 1051 RSFYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIR 1086
SF + R+K+ VKLVA EEE +GI+
Sbjct: 963 PSFAKARQKYVPATPFAVKLVASRDSSAEEETTGIQ 998
>gi|255585368|ref|XP_002533380.1| conserved hypothetical protein [Ricinus communis]
gi|223526773|gb|EEF28998.1| conserved hypothetical protein [Ricinus communis]
Length = 1112
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/1139 (41%), Positives = 656/1139 (57%), Gaps = 77/1139 (6%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V ARQCL+ E+A LD+AV VAR+R HSQTTSLH VSALL +PSS+LR+AC R +
Sbjct: 1 MPTPVITARQCLTPEAAHALDEAVSVARRRGHSQTTSLHAVSALLSIPSSILRDACVRAR 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSK-SVEFPPISNSLMAAIKRSQAQQRRNPDNYHL 119
+ + +P+LQF+ALELCL V+ DR+P+S+ S + PP+SNSLMAAIKRSQA QRR P+N+HL
Sbjct: 61 NSAYTPRLQFKALELCLSVSLDRVPASQLSEQDPPVSNSLMAAIKRSQANQRRQPENFHL 120
Query: 120 -QQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPR 178
QQ C+ + S +KV+L+ +L+ILDDP+ SRVFGE+GF S +IKLAI++P P
Sbjct: 121 YQQQQCSTTSVSCIKVELQNLILSILDDPVVSRVFGESGFRSSEIKLAIVRP----LPQV 176
Query: 179 LSLT---RCPPIFLYNLTDSF---PGR--AGLKLPFGPDDVDENCRRIGEVLAGRDEKKG 230
L L+ R PP+FL NL+D PGR G D DENCRRIGEVL KG
Sbjct: 177 LRLSQRFRGPPMFLCNLSDHSDPGPGRRGFSFPFFSGFTDGDENCRRIGEVLV---RNKG 233
Query: 231 KNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMML 290
+NPLLVGVCA L F + V K + P ++ GL V+C+E ++ +F + + L
Sbjct: 234 RNPLLVGVCAYDTLASFNQLVEKRKDYVLPVELSGLRVICIESDVMKFASENFDKGCVDL 293
Query: 291 KFKEVESAVGRCSGPGVVVNYGELKVLVSDSVS--------TEAARFVVSQLTSLLKSGN 342
+F+EV V + GPG+VVN G+LK +S + ++V +LT +L+
Sbjct: 294 RFEEVGRFVEQNLGPGLVVNLGDLKAFISSENDYSNSSNGLNDLMSYIVEKLTRMLQL-Y 352
Query: 343 GEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHW----------KSSLMGSFVPF 392
G K+WLIG SYE YLK +++FP ++ DWDLQLLPI +SSLM SF+PF
Sbjct: 353 GRKVWLIGTTASYEGYLKFVSRFPSVEKDWDLQLLPITSFRTSMPESCPRSSLMESFIPF 412
Query: 393 GGFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDR 452
GGFFS+P + + S + C+LC EK EQEV A+ K SV DQ NL S +
Sbjct: 413 GGFFSTPSELNGSLSSSYQCISRCHLCNEKCEQEVLAVSKGGCVASVADQYQSNLPSWLQ 472
Query: 453 IAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQ-----LVPKLDIRQRS 507
+A L T+KG+ K +DD L+AK+ LQ+KW+ C LH T+ +P
Sbjct: 473 MAELGTNKGLDV-KTRDDGDVLSAKVAGLQKKWDSICWRLHLTRPQGSNTLPS-GFPTVV 530
Query: 508 HVQLSEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANN 567
QL E + A + S++ L ++C N +S+ + +PLS+ A+
Sbjct: 531 GFQLVEDKKDDAEKGSSNNTNAPLDGNRCMNVPIDLQKISR------RQLGVPLSA-ASV 583
Query: 568 VNFQSRLPINSSTKPQSNNDEHLLPPHPLADL-YKPHEHTSFSFLASVTTDLGLGKIYP- 625
N +S +K + + + L P ++ S + SVTTDLGL +I P
Sbjct: 584 ANTESVKQWERPSKEEDHESDGLRSPCSYSNSSIADGNRASPTSATSVTTDLGL-RISPI 642
Query: 626 STRQEANTPKLIDNKEQC-----FSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDP 680
ST + P +NK SGS S D ++ ++ SSS S+ G FDP
Sbjct: 643 STSYDTKKP---ENKHYVELSRDLSGSFSPNNDVINGSISDHLAHSSSFSSLDIGRQFDP 699
Query: 681 RDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKK 740
+K L AL EKV QDEA+ ISQ ++ +R N R GS+ KR IW FLGPD+ K+
Sbjct: 700 TSFKMLVRALTEKVSCQDEAVHLISQTIAHYRTRNERHQGSSLKRDIWFNFLGPDRCSKR 759
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
KIA+ALAEI+FG+ LI D+S + + +S + + D RGK ++DY+ E
Sbjct: 760 KIAAALAEIIFGSSENLISADLSPQDGIVNMHS----EEVHAYDVMFRGKTIIDYVAGEL 815
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKH 860
KP +VVFLE++DKA D Q+SL++AI TGKF+DS+GR+V I+ IFV TST+ K
Sbjct: 816 GKKPLAVVFLENVDKA-DVQAQNSLSRAIRTGKFSDSHGREVGINNAIFVTTSTLGDDKK 874
Query: 861 SVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKR 920
+ +SEE IL K MQ I A+ +N RK S+ KR
Sbjct: 875 LSSTKDFST-YSEERILRIKGQPMQMLIEQAPAEKMV-QNLNHSPVMRKVPSSSVFVNKR 932
Query: 921 KRTDDGDSPINSQKQVDDSFRS------YLDLNLPADEAE-EDTSSEKFDSDTICENSGA 973
K + +N K + + R+ YLDLNLPA+E + + + D+D++ NS A
Sbjct: 933 KLVG-ANQNVNRHKTSEVAKRAHKTSSRYLDLNLPAEENDMQIIENGDSDNDSMSSNSKA 991
Query: 974 WLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATW 1033
WL+DF DQ D I VF+P +FD L E+IL I F + G E LL+ID ++ Q+LAA +
Sbjct: 992 WLQDFLDQLDRIVVFKPFDFDALGERILTGINDSFHKIVGSECLLDIDSKVTEQLLAAAY 1051
Query: 1034 LSDRKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIRLP-KII 1091
LS RK+ +E W+E V+ + F EV +++ +A S+VKLV+ +GL ++E+ +G LP KII
Sbjct: 1052 LSPRKRVVEEWMEQVLNKGFVEVLERYNLSAHSIVKLVSCKGLFLDEDMAGGHLPSKII 1110
>gi|145323770|ref|NP_001077474.1| P-loop containing nucleoside triphosphate hydrolase domain and Clp-N
motif-containing protein [Arabidopsis thaliana]
gi|8954026|gb|AAF82200.1|AC067971_8 Strong similarity to an unknown protein F23F1.11 gi|7486038 from
Arabidopsis thaliana BAC F23F1 gb|AC004680. ESTs
gb|T75672, gb|N65732 and gb|AA404793 come from this gene
[Arabidopsis thaliana]
gi|332189971|gb|AEE28092.1| P-loop containing nucleoside triphosphate hydrolase domain and Clp-N
motif-containing protein [Arabidopsis thaliana]
Length = 979
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/1128 (40%), Positives = 617/1128 (54%), Gaps = 186/1128 (16%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T VT AR+CL+EE+AR LDDAV VAR+R H+QTTSLH VSALL +PSS+LRE C
Sbjct: 1 MPTPVTTARECLTEEAARALDDAVVVARRRSHAQTTSLHAVSALLAMPSSILREVCVSRA 60
Query: 61 SYSV--SPKLQFRALELCLGVAFDRLPSSKS---VEFPPISNSLMAAIKRSQAQQRRNPD 115
+ SV S +LQFRALELC+GV+ DRLPSSKS E PP+SNSLMAAIKRSQA QRR+P+
Sbjct: 61 ARSVPYSSRLQFRALELCVGVSLDRLPSSKSPATEEDPPVSNSLMAAIKRSQANQRRHPE 120
Query: 116 NYHLQQIHCNQQ-----TASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQP 170
+YHLQQIH + ++LKV+LKYF+L+ILDDP+ +RVFGEAGF S +IKL ++ P
Sbjct: 121 SYHLQQIHASNNGGGGCQTTVLKVELKYFILSILDDPIVNRVFGEAGFRSSEIKLDVLHP 180
Query: 171 SVTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPF-GPDDVDENCRRIGEVLAGRDEKK 229
VTQ R S RCPP+FL NL +S P R + PF G DEN RRIGEVL +D+
Sbjct: 181 PVTQLSSRFSRGRCPPLFLCNLPNSDPNR---EFPFSGSSGFDENSRRIGEVLGRKDK-- 235
Query: 230 GKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVG-GRVNVEMM 288
KNPLL+G CAN ALK F +S+N GK+G I GL ++ +E EI+E + G N E +
Sbjct: 236 -KNPLLIGNCANEALKTFTDSINSGKLGFLQMDISGLSLISIEKEISEILADGSKNEEEI 294
Query: 289 MLKFKEVESAVGRC-SGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLW 347
+K ++ V + S G+V+N GELKVL S+ + A +VS+L+ LLK ++L
Sbjct: 295 RMKVDDLGRTVEQSGSKSGIVLNLGELKVLTSE--ANAALEILVSKLSDLLKH-ESKQLS 351
Query: 348 LIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI-----------HWKSSLMGSFVPFGGFF 396
IG S ETY K++ +FP ++ DWDL +LPI + KSSLMGSFVPFGGFF
Sbjct: 352 FIGCVSSNETYTKLIDRFPTIEKDWDLHVLPITASTKPSTQGVYPKSSLMGSFVPFGGFF 411
Query: 397 SSPPDFKNPVRSKSHYS-TLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAA 455
SS +F+ P+ S + + + C+LC EK QEVAA+LK SS S+ D+C + L R
Sbjct: 412 SSTSNFRVPLSSTVNQTLSRCHLCNEKYLQEVAAVLKAGSSLSLADKCSEKLAPWLRAIE 471
Query: 456 LDTSKGV-GTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRS---HVQL 511
KG+ G++KA DD ++ LQ+KW++ CQS+H T PKL + S VQ
Sbjct: 472 TKEDKGITGSSKALDDANTSASQTAALQKKWDNICQSIHHTPAFPKLGFQSVSPQFPVQT 531
Query: 512 SEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQ 571
+ VR S + P L + P P ++++++ N T+ L
Sbjct: 532 EKSVRTPT----SYLETPKLLNPPISKPKP-----MEDLTASVTNRTVSLP--------- 573
Query: 572 SRLPINSSTKPQSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEA 631
L+ VTTD GLG IY S QE+
Sbjct: 574 ---------------------------------------LSCVTTDFGLGVIYASKNQES 594
Query: 632 NTPKLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALA 691
T +E+ ++++ + HT + +D+K+LR L+
Sbjct: 595 KT-----TREKPMLVTLNSSLE-------------------HTYQ----KDFKSLREILS 626
Query: 692 EKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
KV WQ EA+ ISQ + + + R N GIWLA LGPDKVGKKK+A L+E+ F
Sbjct: 627 RKVAWQTEAVNAISQIICGCKTDSTR---RNQASGIWLALLGPDKVGKKKVAMTLSEVFF 683
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G K I VD +E C D K RGK +VDY+ E KP+SVV LE
Sbjct: 684 GGKVNYICVDFGAEH----------CS----LDDKFRGKTVVDYVTGELSRKPHSVVLLE 729
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKF 871
+++KA P Q L++A+STGK D +GR +S+ +I V TS I K + H PVKF
Sbjct: 730 NVEKAEFPD-QMRLSEAVSTGKIRDLHGRVISMKNVIVVVTSGIAKDNATDH-VIKPVKF 787
Query: 872 SEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDDGDSPIN 931
EE +L A+ W++Q + G V RK R + +
Sbjct: 788 PEEQVLSARSWKLQIKL---------GDATKFGVNKRKYELETAQRAVKVQ--------- 829
Query: 932 SQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPL 991
RSYLDLNLP +E E F D E+ AW ++F ++ D F+P+
Sbjct: 830 ---------RSYLDLNLPVNETE-------FSPDHEAEDRDAWFDEFIEKVDGKVTFKPV 873
Query: 992 NFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWL------SDRKKAIENWI 1045
+FD LA+ I +I F+R FG E LE+D E+++QILAA+W + + ++ W+
Sbjct: 874 DFDELAKNIQEKIGSHFERCFGSETHLELDKEVILQILAASWSSLSSGEEEGRTIVDQWM 933
Query: 1046 ENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIRLPKIINV 1093
+ V+ RSF E ++K+ VKLVA L ASG+ LP ++V
Sbjct: 934 QTVLARSFAEAKQKYGSNPMLGVKLVASSSGL----ASGVELPAKVDV 977
>gi|449499195|ref|XP_004160747.1| PREDICTED: uncharacterized LOC101216395 [Cucumis sativus]
Length = 1109
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/1138 (38%), Positives = 646/1138 (56%), Gaps = 85/1138 (7%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRV- 59
M T V+LARQCL+ ++A LD+AV VA +R H+QTTSLH +SALL +PSS LR+AC R
Sbjct: 1 MPTAVSLARQCLAPDAAHALDEAVAVAHRRGHAQTTSLHAISALLSLPSSALRDACARAR 60
Query: 60 QSYSVSPKLQFRALELCLGVAFDRLPSSKSVEFPPISNSLMAAIKRSQAQQRRNPDNYHL 119
++ + SP+LQF+ALELCL V+ DR+PS++ + PP+SNSLMAAIKRSQA QRR P+N+HL
Sbjct: 61 KTTAYSPRLQFKALELCLSVSLDRVPSTQISDDPPVSNSLMAAIKRSQANQRRQPENFHL 120
Query: 120 QQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRL 179
+Q + + +KV+L++F+L+ILDDP+ SRVFGEAGF S +IKLAII+P FP L
Sbjct: 121 YHQLSHQSSIACVKVELQHFLLSILDDPVVSRVFGEAGFRSSEIKLAIIRP----FPQLL 176
Query: 180 SLT---RCPPIFLYNLTD-SFPGRAGLKLP---FGPDDVDENCRRIGEVLAGRDEKKGKN 232
T R PP+FL NL D S P R G P F D ++N RRIGEVL GR+ +G+N
Sbjct: 177 RYTSRSRGPPLFLCNLMDCSDPNRRGFLFPLSGFRDGDNNDNNRRIGEVL-GRN--RGRN 233
Query: 233 PLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKF 292
PLLVGV A ALKGF ++ P ++ G+ +C+E + + ++ + + +KF
Sbjct: 234 PLLVGVSAYVALKGFTNAIEKRNDNFLPEELAGVRTICLENDFSRYLSENSEMGSLNMKF 293
Query: 293 KEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWLIGAA 352
EV V + PG++VN+G+LK V ++ + + A VV QL L+ +G+K+WLIGAA
Sbjct: 294 VEVVQMVEQSPKPGLIVNFGDLKAFVGENSTDDRASHVVGQLKKLVDV-HGDKVWLIGAA 352
Query: 353 MSYETYLKMLAKFPGLDNDWDLQLLPI-------HWKSSLMGSFVPFGGFFSSPPDFKNP 405
SYETYL + KFP ++ DWDL LLPI + +SSLMGSFVP GGFFS+P D P
Sbjct: 353 SSYETYLSFVTKFPSIEKDWDLHLLPITSLRPESYPRSSLMGSFVPLGGFFSTPSDATIP 412
Query: 406 VRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVGTA 465
+ + + C C + E+EV A K + +++Q +L S ++ L A
Sbjct: 413 LNVSYQHPSRCLQCDKSCEEEVIAASKGVFTPPLSEQYQSSLPSWMQMTELSNFDAFD-A 471
Query: 466 KAKDDVTALNAKIMELQRKWNDTCQSLHR------TQLVPKL-------DIRQRSHVQLS 512
K +DD L+AKI Q+KW++ CQ LH + P + D R+ + V S
Sbjct: 472 KTRDDGLVLSAKIAGFQKKWDNICQRLHHGPPLKEAPMFPTVVGFHATEDKREDAAVINS 531
Query: 513 EFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQS 572
++ K S P+ S+ P +L N T PLS +A+N NF S
Sbjct: 532 STSACASSHKDS----PTDLNSRNFMDLPKVSLLRSN--------TFPLSGKASNENFLS 579
Query: 573 RL----PINSSTKPQSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTR 628
+L P + + +S N L + D TS SVTTDLGLG + T
Sbjct: 580 KLQEGTPKIENLELRSRNSPFSLSISSVDD----ENRTSSPSAGSVTTDLGLGIVSLPTS 635
Query: 629 QEANTPKLIDNKEQCF----SGSISAEFDAVSEGTFHNVV-QSSSCSAPHTGEPFDPRDY 683
+ P ++ K F SG S D V+ + SS S+P + D
Sbjct: 636 YKLKKP--LNPKSADFPSDLSGCCSTNVDLVNGRVCNGFTPSSSCSSSPEQRGQVNAMDV 693
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIA 743
K+L L E+V WQD+A+ ISQ +S+ + GSN + IW F+GPDK GKK++
Sbjct: 694 KSLFRLLKERVFWQDQAVSIISQTISQRQRH-----GSNLRGDIWFNFVGPDKFGKKRVG 748
Query: 744 SALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSK 803
A+AEI++GNK + I VD+SS+ + PN+ + + RGK ++D++ E R +
Sbjct: 749 IAVAEIMYGNKDQFICVDLSSQDGMVNPNT----PRVRSYSAEFRGKTVLDFVAAELRKQ 804
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV- 862
P S+V LE++DK A+ + Q+ L++AI TGK +D GR+VSI IF+ T+T L +H +
Sbjct: 805 PLSIVMLENVDK-AELLDQNRLSQAIQTGKLSDLQGREVSIKNAIFMTTTTSLITEHQIT 863
Query: 863 HPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNP--ESRRKR 920
P +K+SE+ +L AK W ++ ++ F D S V T RK NP S+RK
Sbjct: 864 FPNKQMLKYSEKRLLKAKSWPLRIQVASSFGDQTNRSK-TVSDTERKSTPNPFFMSKRKL 922
Query: 921 KRTDDGDSPINSQKQVDDSFRS-----YLDLNLPADE-AEEDTSSEKFDSDTICENSGAW 974
D + V S ++ + DLN PA+E + D + D+D+ E S W
Sbjct: 923 NVIDGSSDHHEISEMVKRSNKTPTSNKFPDLNRPAEENPQHDIDGDWTDNDSTSEISKTW 982
Query: 975 LEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWL 1034
L++F + D + VF+P +FD LAEKI ++++ F FG E +LEID ++ Q+LAA ++
Sbjct: 983 LQEFCNHIDQVVVFKPFDFDGLAEKIQKDVKKIFHSVFGPEYMLEIDSMVMEQLLAAAYI 1042
Query: 1035 SDRKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVA-HEGLLVEEEASGIRLPKII 1091
S K +++W+E V+ R F EV+R H ++ S+++L + L +EE+ + + LP+ I
Sbjct: 1043 SYGNKDVDDWMEQVLSRKFLEVKRTHILSSYSIIELTTCDQELSLEEKTAEVCLPQRI 1100
>gi|449441584|ref|XP_004138562.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216395
[Cucumis sativus]
Length = 1123
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/1159 (37%), Positives = 643/1159 (55%), Gaps = 113/1159 (9%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRV- 59
M T V+LARQCL+ + A VA +R H+QTTSLH +SALL +PSS LR+AC R
Sbjct: 1 MPTAVSLARQCLAPDXA--------VAHRRGHAQTTSLHAISALLSLPSSALRDACARAR 52
Query: 60 QSYSVSPKLQFRALELCLGVAFDRLPSSKSVEFPPISNSLMAAIKRSQAQQRRNPDNYHL 119
++ + SP+LQF+ALELCL V+ DR+PS++ + PP+SNSLMAAIKRSQA QRR P+N+HL
Sbjct: 53 KTTAYSPRLQFKALELCLSVSLDRVPSTQISDDPPVSNSLMAAIKRSQANQRRQPENFHL 112
Query: 120 QQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRL 179
+Q + + +KV+L++F+L+ILDDP+ SRVFGEAGF S +IKLAII+P FP L
Sbjct: 113 YHQLSHQSSIACVKVELQHFLLSILDDPVVSRVFGEAGFRSSEIKLAIIRP----FPQLL 168
Query: 180 SLT---RCPPIFLYNLTD-SFPGRAGLKLP---FGPDDVDENCRRIGEVLAGRDEKKGKN 232
T R PP+FL NL D S P R G P F D ++N RRIGEVL GR+ +G+N
Sbjct: 169 RYTSRSRGPPLFLCNLMDCSDPNRRGFLFPLSGFRDGDNNDNNRRIGEVL-GRN--RGRN 225
Query: 233 PLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKF 292
PLLVGV A ALKGF ++ P ++ G+ +C+E + + ++ + + +KF
Sbjct: 226 PLLVGVSAYVALKGFTNAIEKRNDNFLPEELAGVRTICLENDFSRYLSENSEMGSLNMKF 285
Query: 293 KEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWLIGAA 352
EV V + PG++VN+G+LK V ++ + + A VV QL L+ +G+K+WLIGAA
Sbjct: 286 VEVVQMVEQSPKPGLIVNFGDLKAFVGENSTDDRASHVVGQLKKLVDV-HGDKVWLIGAA 344
Query: 353 MSYETYLKMLAKFPGLDNDWDLQLLPI-------HWKSSLMGSFVPFGGFFSSPPDFKNP 405
SYETYL + KFP ++ DWDL LLPI + +SSLMGSFVP GGFFS+P D P
Sbjct: 345 SSYETYLSFVTKFPSIEKDWDLHLLPITSLRPESYPRSSLMGSFVPLGGFFSTPSDATIP 404
Query: 406 VRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQC------------LDNLTSSD-R 452
+ + + C C + E+EV A K + +++Q L N + D +
Sbjct: 405 LNVSYQHPSRCLQCDKSCEEEVIAASKGVFTPPLSEQYQSSLPSWMQMTELSNFDAFDAK 464
Query: 453 IAALDTSKGV--------GTAKAKDDVTALNAKIMELQRKWNDTCQSLHR------TQLV 498
I A+ S + + +DD L+AKI Q+KW++ CQ LH +
Sbjct: 465 IEAIYLSISILFISHSSWCFVQTRDDGLVLSAKIAGFQKKWDNICQRLHHGPPLKEAPMF 524
Query: 499 PKL-------DIRQRSHVQLSEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNIS 551
P + D R+ + V S ++ K S P+ S+ P +L N
Sbjct: 525 PTVVGFHATEDKREDAAVINSSTSACASSHKDS----PTDLNSRNFMDLPKVSLLRSN-- 578
Query: 552 SAEQNATIPLSSEANNVNFQSRL----PINSSTKPQSNNDEHLLPPHPLADLYKPHEHTS 607
T PLS +A+N NF S+L P + + +S N L + D TS
Sbjct: 579 ------TFPLSGKASNENFLSKLQEGTPKIENLELRSRNSPFSLSISSVDD----ENRTS 628
Query: 608 FSFLASVTTDLGLGKIYPSTRQEANTPKLIDNKEQCF----SGSISAEFDAVSEGTFHNV 663
SVTTDLGLG + T + P ++ K F SG S D V+ +
Sbjct: 629 SPSAGSVTTDLGLGIVSLPTSYKLKKP--LNPKSADFPSDLSGCCSTNVDLVNGRVCNGF 686
Query: 664 V-QSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSN 722
SS S+P + D K+L L E+V WQD+A+ ISQ +S+ + GSN
Sbjct: 687 TPSSSCSSSPEQRGQVNAMDVKSLFRLLKERVFWQDQAVSIISQTISQ-----RQRHGSN 741
Query: 723 SKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDF 782
+ IW F+GPDK GKK++ A+AEI++GNK + I VD+SS+ + PN+ +
Sbjct: 742 LRGDIWFNFVGPDKFGKKRVGIAVAEIMYGNKDQFICVDLSSQDGMVNPNT----PRVRS 797
Query: 783 CDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDV 842
+ RGK ++D++ E R +P S+V LE++DK A+ + Q+ L++AI TGK +D GR+V
Sbjct: 798 YSAEFRGKTVLDFVAAELRKQPLSIVMLENVDK-AELLDQNRLSQAIQTGKLSDLQGREV 856
Query: 843 SISGMIFVATSTILKGKHSV-HPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGM 901
SI IF+ T+T L +H + P +K+SE+ +L AK W ++ ++ F D S
Sbjct: 857 SIKNAIFMTTTTSLITEHQITFPNKQMLKYSEKRLLKAKSWPLRIQVASSFGDQTNRSK- 915
Query: 902 NVKVTPRKENSNP--ESRRKRKRTDDGDSPINSQKQVDDSFRS-----YLDLNLPADE-A 953
V T RK NP S+RK D + V S ++ + DLN PA+E
Sbjct: 916 TVSDTERKSTPNPFFMSKRKLNVIDGSSDHHEISEMVKRSNKTPTSNKFPDLNRPAEENP 975
Query: 954 EEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFG 1013
+ D + D+D+ E S WL++F + D + VF+P +FD LAEKI ++++ F FG
Sbjct: 976 QHDIDGDWTDNDSTSEISKTWLQEFCNHIDQVVVFKPFDFDGLAEKIQKDVKKIFHSVFG 1035
Query: 1014 FEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVA- 1072
E +LEID ++ Q+LAA ++S K +++W+E V+ R F EV+R H ++ S+++L
Sbjct: 1036 PEYMLEIDSMVMEQLLAAAYISYGNKDVDDWMEQVLSRKFLEVKRTHILSSYSIIELTTC 1095
Query: 1073 HEGLLVEEEASGIRLPKII 1091
+ L +EE+ + + LP+ I
Sbjct: 1096 DQELSLEEKTAEVCLPQRI 1114
>gi|356541735|ref|XP_003539329.1| PREDICTED: uncharacterized protein LOC100805591 [Glycine max]
Length = 825
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 353/818 (43%), Positives = 485/818 (59%), Gaps = 49/818 (5%)
Query: 311 YGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWLIGAAMSYETYLKMLAKFPGLDN 370
YGE++V V + FVVSQLT LL G K+WL+G A + E Y K L FP +D
Sbjct: 21 YGEIEVFVGGYKEEGSVGFVVSQLTRLLGVHGGGKVWLLGVAGTSEDYSKFLRLFPTVDK 80
Query: 371 DWDLQLLP----------IHWKSSLMGSFVPFGGFFSSPPDFKNPVR----SKSHYSTLC 416
DWDL LL ++ KSSLMGSFVPFGGFFS+P +FKNPV S S T C
Sbjct: 81 DWDLHLLTMTSATPSIEKLYPKSSLMGSFVPFGGFFSTPSEFKNPVSCTNASSSSLLTRC 140
Query: 417 YLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVGTAK--------AK 468
C E EQEVA +LK+ + + T + +D+ +G+ AK
Sbjct: 141 DTCNESCEQEVADILKVGPAATSTSVYSSTSLPRLQKVNVDSDRGLDVAKNELHHPVQTN 200
Query: 469 DDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDI-RQRSHVQLSEFVRLMANRKGSSSK 527
++ T+LN KI LQRKW+D CQ LH+ + +P+ DI + R E + GSSS+
Sbjct: 201 EENTSLNIKIFGLQRKWSDICQRLHQNRSLPEFDITKTRFQAPSHEGFQFGP---GSSSR 257
Query: 528 YPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQS---RLPINSSTKPQS 584
P E Q ++ ++M ++ S+ +P+S + V+ ++P S T
Sbjct: 258 GPLHSEIQYSDHI--SYMSKESQSAFPFKQILPVSVPFDTVSITDEADQIPKVSKTDMHG 315
Query: 585 NNDEHLLPPHPLAD--LYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKLIDNKE- 641
+ P P A+ L P T+FS + VTTDLGLG IY S E +TPKL D+K+
Sbjct: 316 T----WVSPSPKANISLLDP---TTFSSVTPVTTDLGLGTIYTSAAHEPDTPKLSDHKKP 368
Query: 642 -QCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEA 700
S S+S +FDA++E T H + +SSSCS P+ F+ D+K+L L EKVGWQDEA
Sbjct: 369 LHHLSDSLSTDFDAMNENTSHQIARSSSCSGPNLEGRFETVDFKSLYHLLTEKVGWQDEA 428
Query: 701 ICTISQAVSRWRIGNGR-DVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIH 759
I I++ VSR R G G+ GS+ + IWLAFLGPD++GK+KIASALAEI+FGNK LI
Sbjct: 429 IYAINRTVSRCRSGAGKLSSGSHVRADIWLAFLGPDRLGKRKIASALAEILFGNKQSLIT 488
Query: 760 VDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADP 819
VD+SS+ R SIF+ QN +C L K ++DYI E KP+SVVFLE++D+A D
Sbjct: 489 VDLSSQDRCYPSYSIFEFQN-SYCHDVLMRKTVLDYIAGELSKKPHSVVFLENVDQA-DF 546
Query: 820 IVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIILGA 879
+VQ+SL AI TGKF S+GR++SI+ +F+ TS++ K S + + P F EE IL A
Sbjct: 547 LVQNSLFHAIKTGKFPYSHGREISINNAMFIVTSSVFKSSGSFNLEEDPKMFPEERILEA 606
Query: 880 KRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDDGD----SPINSQKQ 935
KR QMQ ++ H A R NVKV RK S KRK + GD +P + K
Sbjct: 607 KRCQMQLSLGHASEGAKRSGCTNVKVAERKGKSKTTFLSKRKLIESGDLKDKAPCKTLKP 666
Query: 936 VDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNFDL 995
V ++ RSYLDLN+P +E EE + +S++I ENSGAWL D DQ D VF+P NFD
Sbjct: 667 VREASRSYLDLNMPLEEVEEGNNYNDDESESIVENSGAWLNDLCDQVDEKVVFKPFNFDS 726
Query: 996 LAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYE 1055
+AE++++ I +FQ+ G E +LEI+YE++ QILAA WLSD+KK++E+W+E+V+ RSF E
Sbjct: 727 IAEQVIKSIDTQFQKMLGSEFILEIEYEVMTQILAAAWLSDKKKSLEDWVEHVLGRSFGE 786
Query: 1056 VRRKHHFTAGSVVKLVAHEGLLVEEEASGIRLPKIINV 1093
+K+HF V+KLV E +EE++ G+ LP IN+
Sbjct: 787 AHQKYHFAPEFVMKLVNCERFFLEEQSPGVCLPARINL 824
>gi|357461271|ref|XP_003600917.1| Chaperone protein clpB [Medicago truncatula]
gi|355489965|gb|AES71168.1| Chaperone protein clpB [Medicago truncatula]
Length = 1081
Score = 567 bits (1462), Expect = e-158, Method: Compositional matrix adjust.
Identities = 411/1138 (36%), Positives = 599/1138 (52%), Gaps = 107/1138 (9%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLL-REACDRV 59
M T V+ ARQCL+ E+ + L+DAV VA++R H+QTTSLH +SALL +PSS + R+AC R
Sbjct: 1 MPTPVSSARQCLTPEAIQALNDAVAVAKRRGHAQTTSLHAISALLSLPSSSILRDACSRS 60
Query: 60 QSYSVSPKLQFRALELCLGVAFDRLPSSK----SVEFPPISNSLMAAIKRSQAQQRRNPD 115
++ + SP+LQF+AL+LCL V+ DR PSS S PP+SNSLMAAIKRSQA QRR+PD
Sbjct: 61 RNSAYSPRLQFKALDLCLSVSLDRSPSSHNNVSSDHEPPVSNSLMAAIKRSQANQRRHPD 120
Query: 116 NYHLQQIHCNQQ-----TASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQP 170
N+H Q + S +KV+L++ VL++LDDP+ SRVF EAGF S +IKLAI++P
Sbjct: 121 NFHFYHQQQQLQSQQTFSVSSVKVELQHLVLSVLDDPVVSRVFAEAGFRSSEIKLAILRP 180
Query: 171 SVTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPF-------GPDDVDENCRRIGEVLA 223
P L R PP+FL NL + P R G DVDEN RRIGE+L
Sbjct: 181 L-----PHL-FRRGPPVFLCNLPEQ-PRRGAGFGFGLGFPFLSGVGDVDENFRRIGEILV 233
Query: 224 GRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRV 283
KGKNPLL+G C N AL+ F E+V + G+ P ++ GL V+C+ E+
Sbjct: 234 ---RSKGKNPLLLGACGNDALRSFTEAVEKRREGVLPLELDGLRVICIGKELESG----- 285
Query: 284 NVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNG 343
+ E++ LK K++ + V C GPGV+V++GELK V+D V +L LLK +
Sbjct: 286 DCEVVSLKLKQIAAIVEECVGPGVIVSFGELKSFVNDDGG------FVEELGKLLKI-HY 338
Query: 344 EKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI----------HWKSSLMGSFVPFG 393
+K WL GAA SYE+YLK L +FP ++ DWDLQ+LPI +SSLM SFVP G
Sbjct: 339 DKFWLAGAADSYESYLKFLGRFPSVEKDWDLQILPITSVKASESYQRPRSSLMDSFVPLG 398
Query: 394 GFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRI 453
GFFSS D + P+ EK E EV S S D NL +
Sbjct: 399 GFFSSQSDLRGPLNGSFGCVPHDNQFGEKCEHEVLGASNERFSVSAPDPYPSNLPQWLKT 458
Query: 454 AALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSE 513
T+K + D V +++ + ++ CQ LH Q +PK + H +
Sbjct: 459 TEFGTTKTLTVKTKDDGVLGDSSESCTPRNNLDNICQVLH--QRIPKANT---CHTVVGF 513
Query: 514 FVRLMANRKGS--SSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNV-NF 570
N SSK + N + A + Q +S+ + + + P A V N
Sbjct: 514 HCADNKNEDADNHSSKIVDKSSKEYINLNSHAPVGVQTMSALQSSNSFPSFFLAKQVKNI 573
Query: 571 QSRLPINSSTKPQSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQE 630
+ + + K + D L + + S + + SVTTDLGLG T +
Sbjct: 574 PNLTDMFQNVKDLESGD--LRSCNISSSSVSDGSQLSPTSVTSVTTDLGLGICSSPTSNK 631
Query: 631 ANT---------PKLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSC-SAPHTGEPFDP 680
PK I N+ ++ F+ E QSSSC + + + D
Sbjct: 632 LTKAAVQYTMEPPKEIPNR-------FTSSFNLDEEIIRMRPSQSSSCLTFDYYQQADDA 684
Query: 681 RDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKK 740
R+ K L AL++ V WQDEAI I + + + +D G N + W+ F+GPD+ GKK
Sbjct: 685 RNPKVLFEALSKAVRWQDEAIRAIIKTIVCGSTKSAKDHGLNQRGDKWMNFVGPDRHGKK 744
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
KIA +LAE+++G++ VD+SS++ ++ C+ K RGK +D++ E
Sbjct: 745 KIAVSLAELLYGSRENFTFVDLSSKE-------------MNGCNVKFRGKSHLDFLVDEC 791
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKH 860
KP SVVF+E++DKA D + QSSL++AI TGK TDS+GR+VS + IFV + + + +
Sbjct: 792 CKKPLSVVFIENVDKA-DIVAQSSLSQAIKTGKITDSHGREVSANNAIFVFSFSGYQ--N 848
Query: 861 SVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKR 920
S+ P +SEE +L + ++ + H D S + V N P
Sbjct: 849 SLMQTREPSNYSEERMLSVRGGGIKIKVEHMVRDIRNQS---IGVPNNSINIIPNLNFIN 905
Query: 921 KRTDDGDSPI-------NSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGA 973
KR GD+ + ++ K+ + LDLNLPA+E E+ + + EN
Sbjct: 906 KRKLIGDNELHDPHLLADAAKRAHTTSNRLLDLNLPAEENEQKQTDDGNFEHVSTENQNL 965
Query: 974 WLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATW 1033
WL+D ++Q D VF+P +FD L +++L+ ++ F + G E L+I E++ Q+LAA +
Sbjct: 966 WLQDLYNQVDETVVFKPYDFDSLDDRVLKLVRNNFNKILGSECALQIQTEVMDQLLAAAY 1025
Query: 1034 LSDRKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIRLPKII 1091
+SD +ENW++ V+ F EVRR+++ TA S+VKLV E+AS + LP I
Sbjct: 1026 VSDSDTEVENWVQQVLYGGFTEVRRRYNLTASSIVKLVT-----CPEQASSVHLPPRI 1078
>gi|297736601|emb|CBI25472.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 348/804 (43%), Positives = 464/804 (57%), Gaps = 84/804 (10%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V+LARQCL+ E+A LD+AVGVAR+R H+QTTSLH VSA+L +PSSLLR+AC R +
Sbjct: 1 MPTSVSLARQCLTPEAAHALDEAVGVARRRGHAQTTSLHAVSAMLSLPSSLLRDACARAR 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEFPPISNSLMAAIKRSQAQQRRNPDNY--H 118
+ + S +LQF+ALELCL V+ DR+PS++ + PP+SNSLMAAIKRSQA QRR P+N+ +
Sbjct: 61 NSAYSARLQFKALELCLSVSLDRVPSTQLADDPPVSNSLMAAIKRSQANQRRQPENFQLY 120
Query: 119 LQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPR 178
Q + + S +KV+L++ +L+ILDDP+ SRVFGEAGF S DIKLAI++P R
Sbjct: 121 QQLQQQSSSSISCIKVELQHLILSILDDPVVSRVFGEAGFRSCDIKLAIVRPLPQLL--R 178
Query: 179 LSLTRCPPIFLYNLTDSFPGRAGLKLPF-GPDDVDENCRRIGEVLAGRDEKKGKNPLLVG 237
S +R PP+FL N DS P R P+ G DENC+RIGEVL GR KG+NPLLVG
Sbjct: 179 YSRSRGPPLFLCNFIDSDPSRRSFSFPYSGFFTGDENCKRIGEVL-GRG--KGRNPLLVG 235
Query: 238 VCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKFKEVES 297
VCA AL+ F E V G+ + P +I G F+EV
Sbjct: 236 VCAYDALQSFTEMVEKGRYNILPVEISG--------------------------FEEVGV 269
Query: 298 AVGRCSGPGVVVNYGELKVLVS-DSVSTEAARFVVSQLTSLLKSGNGEKLWLIGAAMSYE 356
V C G G+VVN+G+LKV + D S +VVSQLT LL+ +G K+ L+GA SYE
Sbjct: 270 LVQHCLGAGLVVNFGDLKVFIDRDDASVGVVSYVVSQLTRLLEI-HGGKVRLMGAVSSYE 328
Query: 357 TYLKMLAKFPGLDNDWDLQLLPI----------HWKSSLMGSFVPFGGFFSSPPDFKNPV 406
TYLK L ++P ++ DWDLQLLPI + +SSLM SFVP GGFFSSP + K +
Sbjct: 329 TYLKFLNRYPSIEKDWDLQLLPITSLRPPMGEPYARSSLMESFVPLGGFFSSPCELKGQL 388
Query: 407 RSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVGTAK 466
+++ C+ C EK EQEVAAL K + SV DQ NL + ++A L S AK
Sbjct: 389 SGSYQFTSRCHQCNEKCEQEVAALSKGGFTASVADQYQPNLPAWLQMAELGKSTAFDVAK 448
Query: 467 AKDD-VTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEFVRLMA------ 519
AKDD + LNAKIM LQ+KW++ CQ L TQ PK D R Q+ V A
Sbjct: 449 AKDDGMLLLNAKIMGLQKKWDNICQRLQHTQPFPKADF-YRVGSQVPSVVGFQAVKDSKE 507
Query: 520 ----NRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLP 575
+R ++ PS +S C + + M Q + + + +PL S+ N +F S+L
Sbjct: 508 NADNHRSSKTNASPS--DSGCKHANSCVSMDLQKVPESTPSTPLPLVSK--NESFLSKL- 562
Query: 576 INSSTKPQSNNDEH---LLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEAN 632
+ S +EH L L+ TS + + SVTTDLGLG YP ++Q
Sbjct: 563 ----FEKSSKTEEHEPGSLQSRTLSTSSVGDGRTSPTSVNSVTTDLGLGLFYPPSKQLKK 618
Query: 633 TPK------LIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTL 686
K L D FS A D V+ + S + G+ D RD+KTL
Sbjct: 619 DAKQTHLGPLPD-----FSSRYPANVDLVNGSISNPSSSCSCPDS--WGQS-DQRDFKTL 670
Query: 687 RIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
AL E++ WQ EAI IS+ ++ R+GN + G++ K IW F+GPD+ KKKIA AL
Sbjct: 671 FRALTERIDWQHEAISVISETIAHCRLGNEKRHGASPKGDIWFNFVGPDRFSKKKIAVAL 730
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQ 770
AEI++G + I VD+SS+ +Q
Sbjct: 731 AEILYGRRESFICVDLSSQDENTQ 754
>gi|255592933|ref|XP_002535750.1| conserved hypothetical protein [Ricinus communis]
gi|223522072|gb|EEF26633.1| conserved hypothetical protein [Ricinus communis]
Length = 596
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 282/567 (49%), Positives = 362/567 (63%), Gaps = 19/567 (3%)
Query: 533 ESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSNNDEHLLP 592
ESQC N G ++ S++ + IP+SSEA NV+FQS+L Q P
Sbjct: 43 ESQCANFGLGVNIPSKH------SIPIPVSSEAGNVSFQSKL-----LGQQKEKGGPWFP 91
Query: 593 PHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKLIDNKE--QCFSGSISA 650
P L P + TS S + SVTTDLGLG IY S+ +E TPKL D++E Q FSG S+
Sbjct: 92 PIILPITNLPADRTSSSSVTSVTTDLGLGTIYASSSREPITPKLCDHREYLQRFSGFKSS 151
Query: 651 EFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSR 710
EF+ VSE T + ++ SS S P +G FD RD K++ AL EKVGWQ+EAIC I++A+SR
Sbjct: 152 EFE-VSESTSYQIIPSSRFSNPSSGGHFDYRDCKSITKALTEKVGWQEEAICAITRAISR 210
Query: 711 WRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQ 770
+ G GR GS ++ IWL FLGPDKVGKK+IAS LAEI+FG+ LI VD+ SQ
Sbjct: 211 CKAGYGRSCGSTARGNIWLTFLGPDKVGKKRIASMLAEIMFGSHEHLISVDLRFHDGSSQ 270
Query: 771 PNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAIS 830
NS+F+CQ + D K RGK +VDYI E +P+SVV LE++DKA D +VQ+SL++A+
Sbjct: 271 LNSVFECQESNDYDVKFRGKTVVDYISMELGKRPHSVVLLENVDKA-DLLVQNSLSQAVR 329
Query: 831 TGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIILGAKRWQMQTAISH 890
TGKF DS+GR++ I+ MIFV TST G S PQ +KFSEE ILGAK WQM+ I H
Sbjct: 330 TGKFADSHGREIGINNMIFVMTSTSAVGNKSHLPQKVTIKFSEERILGAKSWQMKMLIKH 389
Query: 891 GFADAARGSGMNVKVTPR-KENSNPESRRK---RKRTDDGDSPINSQKQVDDSFRSYLDL 946
+ RGS M +K + ++P ++RK T + D ++KQ F LDL
Sbjct: 390 AAEGSNRGSEMTMKFSRLVTSTASPVNKRKLDGASDTAEQDFSNEAKKQAHKLFGPSLDL 449
Query: 947 NLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQP 1006
NLP +E EE+ S SD+I ENS AWL+DF DQ D VF+P NFD LAEKI+REI
Sbjct: 450 NLPVEETEENNDSGSCGSDSISENSQAWLDDFLDQVDEKVVFKPFNFDGLAEKIVREIST 509
Query: 1007 KFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYEVRRKHHFTAGS 1066
F +AFG EV LEID E++VQILAA+WLSDR +A+E+W+E VV R F E R+K+
Sbjct: 510 HFHKAFGTEVPLEIDDEVMVQILAASWLSDRSRAVEDWVEEVVGRGFMEARQKYGINVQY 569
Query: 1067 VVKLVAHEGLLVEEEASGIRLPKIINV 1093
+VKLVA LLVEE A GI LP IN+
Sbjct: 570 IVKLVACTSLLVEERAPGICLPARINL 596
>gi|77548259|gb|ABA91056.1| expressed protein [Oryza sativa Japonica Group]
Length = 1131
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 390/1204 (32%), Positives = 587/1204 (48%), Gaps = 190/1204 (15%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLL-REACDRV 59
M T V ARQCLS + LD AV +R+R H+QTTSLH++S+LL P+ L R+A R
Sbjct: 1 MPTPVAAARQCLSPAAVPALDAAVASSRRRAHAQTTSLHLISSLLAPPAPPLLRDALARA 60
Query: 60 QSYSVSPKLQFRALELCLGVAFDRLPSSKSV-------EFPPISNSLMAAIKRSQAQQRR 112
+S + SP++Q +AL+LC V+ DRLPS + + PP+SNSLMAAIKRSQA QRR
Sbjct: 61 RSAAYSPRVQLKALDLCFAVSLDRLPSVSASSSSSGAADEPPVSNSLMAAIKRSQANQRR 120
Query: 113 NPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPS- 171
NPD +H QT + +KV+L + VLAILDDP+ SRVF EAGF S DIKLAI++P+
Sbjct: 121 NPDTFHFYHQAATAQTPAAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIKLAILRPAP 180
Query: 172 ----VTQFPPRLSLTRCPPIFLYNLTDS----FPGRAGLKLPFGPDDVDENCRRIGEVLA 223
+ + P R TR PP+FL + + P AG G +ENCRRI E+L+
Sbjct: 181 PMPLLGRLPTR---TRPPPLFLCSFAAADDADVPSPAGNLAGAG----EENCRRIAEILS 233
Query: 224 GRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRV 283
+G+NP+LVGV A SA F + + + P I D+
Sbjct: 234 -----RGRNPMLVGVGAASAADDFAAASPYRIIHVDPNTIDRSDL--------------- 273
Query: 284 NVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLV--SDSVSTEAARFVVSQLTSLLKSG 341
V +A+ + G++++ G+LK LV D+ + E R VV+++T +L++
Sbjct: 274 ----------GVAAAMASATS-GLIISIGDLKQLVPDEDAEAQEKGRRVVAEVTRVLETH 322
Query: 342 NG-EKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHW------------------- 381
+ ++W++G + +YETYL L+KFP +D DWDLQLLPI
Sbjct: 323 SKVGRVWVMGWSATYETYLAFLSKFPLVDKDWDLQLLPITAVHAAATAGPAAAAAGLMPP 382
Query: 382 ----------KSSLMGSFVPFGGFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALL 431
+SLM SFVPFGGF + + + + C C +K EQEVA ++
Sbjct: 383 ATTVAAFSKPAASLMDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATII 442
Query: 432 KLESSDSVTDQCLDNLTS-SDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQ 490
S + D L S + + + G KA+DD LN+KI+ L++KWN+ C
Sbjct: 443 S-ASGITAEDHHQGGLPSLLQNGSMMGPNNGFDPVKARDDRMVLNSKILNLRKKWNEYCL 501
Query: 491 SLHRTQLVPKLDIRQRSHVQLSEFVRLMA-----NRKGSSSKYPSLCESQCTNPSPGAHM 545
LH+ D ++ + F R + R +SSK Q P A
Sbjct: 502 RLHQ-------DHQRINRDPYKPFPRYIGVPTDKERSANSSKGSESVGVQKDVIKPCAVS 554
Query: 546 LSQNISSAEQNATIPLSSEANN---VNFQSRLPINSSTKPQSNNDEHLLPPH--PLADLY 600
+ S+A ++ ++++ N +N Q+R +K N E + L+++
Sbjct: 555 AVHSSSTARPISSPSVTNKRNEDLVLNLQAR-----HSKSDENLQERGMQSQHGTLSNVD 609
Query: 601 KPHEHTSFSFLASVTTDLGLG----------------KIYPSTRQEANTPKLIDN----- 639
P +H S S A V TDL LG ++ S R PK +D+
Sbjct: 610 NPDDHVSPSSAAPVETDLVLGTPRECSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKH 669
Query: 640 ------KEQCFSGSISAEFDAVSEGTFHNVVQSSSCS-------APHTGEPFDPRDYKTL 686
C SI+ S T H+V + +P + D +YK L
Sbjct: 670 PQLSVQPNSCSWSSIN--VGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLL 727
Query: 687 RIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L + VG Q+EA+ I +++ R R R G N + IWL F G D + KK+IA AL
Sbjct: 728 VERLFKVVGRQEEALSAICESIVRCRSTESRR-GPN-RNDIWLCFHGSDSMAKKRIAVAL 785
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE++ G+K LI++D++ + D+ D RGK +D I ++ K S
Sbjct: 786 AELMHGSKDNLIYLDLNLQ---------------DWDDSSFRGKTGIDCIVEQLSKKRQS 830
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
V+FL+++D+ AD +VQ SL+ AI +G+F D G+ V I+ I V + ++++G S +
Sbjct: 831 VLFLDNIDR-ADCLVQDSLSDAIKSGRFQDMRGKVVDINDSIVVLSRSMIQG--SKNGLE 887
Query: 867 TPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPR--------KENSNPESRR 918
+ FSEE IL + +++ + G A + V V+PR S S+R
Sbjct: 888 EGLSFSEEKILATRGHRLKILVEPGRAITSGCPSGKVVVSPRHFLTKIQASLCSGSISKR 947
Query: 919 KRKRTDD----GDSPINSQKQVDDSFRSYLDLNLPADEAE----EDTSSEKFDSDTICEN 970
K +DD +SP +S K++ + DLNLP DE E +D SS +S E
Sbjct: 948 KLSISDDQEKLQESP-SSSKRLHRTSSVPFDLNLPVDEDEPLDADDDSSSHENSYGNTEK 1006
Query: 971 SGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILA 1030
S ++ D F+P +FD LA+ +L+E ++ G E +LEID + QILA
Sbjct: 1007 S---IDALLHSVDGSINFKPFDFDKLADDMLQEFSNILRKNLGSECMLEIDVGAMEQILA 1063
Query: 1031 ATWLSDR-KKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLL--VEEEASGIRL 1087
A W S+ +K + W+E V RS E++ K + S ++LVA E + V+ + G+ L
Sbjct: 1064 AAWKSEEDRKPVPTWLEQVFARSLDELKLKRKHVSSSTLRLVACEDTVPAVKGDGLGVLL 1123
Query: 1088 PKII 1091
P I
Sbjct: 1124 PPRI 1127
>gi|218186254|gb|EEC68681.1| hypothetical protein OsI_37135 [Oryza sativa Indica Group]
Length = 1129
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 388/1207 (32%), Positives = 586/1207 (48%), Gaps = 198/1207 (16%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLL-REACDRV 59
M T V ARQCLS + LD AV AR+R H+QTTSLH++S+LL P+ L R+A R
Sbjct: 1 MPTPVAAARQCLSPAAVPALDAAVASARRRAHAQTTSLHLISSLLAPPAPPLLRDALARA 60
Query: 60 QSYSVSPKLQFRALELCLGVAFDRLPSSKSV------EFPPISNSLMAAIKRSQAQQRRN 113
+S + SP++Q +AL+LC V+ DRLPS + + PP+SNSLMAAIKRSQA QRRN
Sbjct: 61 RSAAYSPRVQLKALDLCFAVSLDRLPSVSASSSSGAADEPPVSNSLMAAIKRSQANQRRN 120
Query: 114 PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPS-- 171
PD +H QT + +KV+L + VLAILDDP+ SRVF EAGF S DIKLAI++P+
Sbjct: 121 PDTFHFYHQAATAQTPAAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIKLAILRPAPP 180
Query: 172 ---VTQFPPRLSLTRCPPIFLYNLTDS----FPGRAGLKLPFGPDDVDENCRRIGEVLAG 224
+ + P R TR PP+FL + + P AG G +ENCRRI E+L+
Sbjct: 181 MPLLGRLPTR---TRPPPLFLCSFAAADDADVPSPAGNLAGAG----EENCRRIAEILS- 232
Query: 225 RDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVN 284
+G+NP+LVGV A SA F + + + P I D+
Sbjct: 233 ----RGRNPMLVGVGAASAADDFAAASPYRIIHVDPNTIDRSDL---------------- 272
Query: 285 VEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLV--SDSVSTEAARFVVSQLTSLLKSGN 342
V +A+ + G++++ G+LK LV D+ + E R VV+++T +L++ +
Sbjct: 273 ---------GVAAAMASATS-GLIISIGDLKQLVPDEDAEAQENGRRVVAEVTRVLETHS 322
Query: 343 G-EKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHW-------------------- 381
++W++G + +YETYL L+KFP +D DWDLQLLPI
Sbjct: 323 KVGRVWVMGWSATYETYLAFLSKFPLVDKDWDLQLLPITAVHAAPAAAGPAAAGGLMPPA 382
Query: 382 ---------KSSLMGSFVPFGGFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLK 432
+SLM SFVPFGGF + + + + C C +K EQEVA ++
Sbjct: 383 TTVAAFSKPAASLMDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIIS 442
Query: 433 LESSDSVTDQCLDNLTS-SDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQS 491
S + D L S + + + G K +DD LN+KI+ L++KWN+ C
Sbjct: 443 -ASGITAEDHHQGGLPSLLQNGSMMGPNNGFDPVKVRDDRMVLNSKILNLRKKWNEYCLR 501
Query: 492 LHRTQLVPKLDIRQRSHVQLSEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQN-- 549
LH+ I + + ++ + A+++ S+ NPS G+ +
Sbjct: 502 LHQDC----QRINRDPYKPFPRYIGVPADKERSA------------NPSKGSESIGVQKD 545
Query: 550 ------ISSAEQNATI-PLSSEANNVNFQSRLPINSSTKPQSNNDEHLLP------PHPL 596
+S+ ++T P+SS + L +N + S +DE+L L
Sbjct: 546 VIKPCAVSAVHSSSTARPISSPSVTNKRNEDLVLNLQAR-HSKSDENLQERGMQSQHGTL 604
Query: 597 ADLYKPHEHTSFSFLASVTTDLGLG----------------KIYPSTRQEANTPKLIDN- 639
++ P +H S S A V TDL LG ++ S R PK +D+
Sbjct: 605 SNADNPDDHASPSSAAPVETDLVLGTPRDCSSKGSSSTCSKRVEDSERSVHLVPKKVDDL 664
Query: 640 ----------KEQCFSGSISAEFDAVSEGTFHNVVQSSSCS-------APHTGEPFDPRD 682
C SI+ S T H+V + +P + D +
Sbjct: 665 NLKHPQLSVQPNSCSWSSIN--VGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSN 722
Query: 683 YKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
YK L L + VG Q+EA+ I +++ R R R S+ IWL F G D + KK+I
Sbjct: 723 YKLLVERLFKVVGRQEEAMSAICESIVRCRSTESRR--GPSRNDIWLCFHGSDSMAKKRI 780
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A ALAE++ G+K LI++D++ + D+ D RGK +D I ++
Sbjct: 781 AVALAELMHGSKENLIYLDLNLQ---------------DWDDSSFRGKTGIDCIVEQLSK 825
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
K SV+FL+++D+ AD +VQ SL+ AI +G+F D G+ V I+ I V + +++ G S
Sbjct: 826 KRRSVLFLDNIDR-ADCLVQDSLSDAIKSGRFQDMRGKVVDINDSIVVLSRSMIHG--SK 882
Query: 863 HPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPR--------KENSNP 914
+ + FSEE IL + +++ + G A + V V+PR S
Sbjct: 883 NGLEEGLSFSEEKILATRGHRLKILVEPGRAITSGCPSGKVVVSPRHFLTKIQASLCSGS 942
Query: 915 ESRRKRKRTDD----GDSPINSQKQVDDSFRSYLDLNLPADEAE----EDTSSEKFDSDT 966
S+RK +DD +SP +S K++ + DLNLP DE E +D SS +S
Sbjct: 943 ISKRKLSMSDDQEKLQESP-SSLKRLHRTSSIPFDLNLPVDEDEPLDADDDSSSHENSYG 1001
Query: 967 ICENSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILV 1026
E S ++ D F+P +FD LA+ +L+E ++ G E +LEID +
Sbjct: 1002 NTEKS---IDALLHSVDGSINFKPFDFDKLADDMLQEFSNILRKNLGAECMLEIDVGAME 1058
Query: 1027 QILAATWLSDRKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLL--VEEEASG 1084
QILAA W S+ K ++ W+E V RS E++ K+ + S ++LV E L V+ + G
Sbjct: 1059 QILAAAWKSEDKGPVQTWLEQVFARSLDELKLKYKHVSSSTLRLVPCEDTLPTVKGDGLG 1118
Query: 1085 IRLPKII 1091
+ LP I
Sbjct: 1119 VLLPPRI 1125
>gi|115486876|ref|NP_001065925.1| Os12g0104300 [Oryza sativa Japonica Group]
gi|108862072|gb|ABA95594.2| expressed protein [Oryza sativa Japonica Group]
gi|113648432|dbj|BAF28944.1| Os12g0104300 [Oryza sativa Japonica Group]
Length = 1129
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 388/1207 (32%), Positives = 585/1207 (48%), Gaps = 198/1207 (16%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLL-REACDRV 59
M T V ARQCLS + LD AV AR+R H+QTTSLH++S+LL P+ L R+A R
Sbjct: 1 MPTPVAAARQCLSPAAVPALDAAVASARRRAHAQTTSLHLISSLLAPPAPPLLRDALARA 60
Query: 60 QSYSVSPKLQFRALELCLGVAFDRLPSSKSV------EFPPISNSLMAAIKRSQAQQRRN 113
+S + SP++Q +AL+LC V+ DRLPS + + PP+SNSLMAAIKRSQA QRRN
Sbjct: 61 RSAAYSPRVQLKALDLCFAVSLDRLPSVSASSSSGAADEPPVSNSLMAAIKRSQANQRRN 120
Query: 114 PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPS-- 171
PD +H QT + +KV+L + VLAILDDP+ SRVF EAGF S DIKLAI++P+
Sbjct: 121 PDTFHFYHQAATAQTPAAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIKLAILRPAPP 180
Query: 172 ---VTQFPPRLSLTRCPPIFLYNLTDS----FPGRAGLKLPFGPDDVDENCRRIGEVLAG 224
+ + P R TR PP+FL + + P AG G +ENCRRI E+L+
Sbjct: 181 MPLLGRLPTR---TRPPPLFLCSFAAADDADVPSPAGNLAGAG----EENCRRIAEILS- 232
Query: 225 RDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVN 284
+G+NP+LVGV A SA F + + + P I D+
Sbjct: 233 ----RGRNPMLVGVGAASAADDFAAASPYRIIHVDPNTIDRSDL---------------- 272
Query: 285 VEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLV--SDSVSTEAARFVVSQLTSLLKSGN 342
V +A+ + G++++ G+LK LV D+ + E R VV+++T +L++ +
Sbjct: 273 ---------GVAAAMASATS-GLIISIGDLKQLVPDEDAEAQENGRRVVAEVTRVLEAHS 322
Query: 343 G-EKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHW-------------------- 381
++W++G + +YETYL L+KFP +D DWDLQLLPI
Sbjct: 323 KVGRVWVMGWSATYETYLAFLSKFPLVDKDWDLQLLPITAVHAAPAAAGPAAAGGLMPPA 382
Query: 382 ---------KSSLMGSFVPFGGFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLK 432
+SLM SFVPFGGF + + + + C C +K EQEVA ++
Sbjct: 383 TTVAAFSKPAASLMDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIIS 442
Query: 433 LESSDSVTDQCLDNLTS-SDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQS 491
S + D L S + + + G K +DD LN+KI+ LQ+KWN+ C
Sbjct: 443 -ASGITAEDHHQGGLPSLLQNGSMMGPNNGFDPVKVRDDRMVLNSKILNLQKKWNEYCLR 501
Query: 492 LHRTQLVPKLDIRQRSHVQLSEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQN-- 549
LH+ I + + ++ + A+++ S+ NPS G+ +
Sbjct: 502 LHQDC----QRINRDPYKPFPRYIGVPADKERSA------------NPSKGSESIGVQKD 545
Query: 550 ------ISSAEQNATI-PLSSEANNVNFQSRLPINSSTKPQSNNDEHLLP------PHPL 596
+S+ ++T P+SS + L +N + S +DE+L L
Sbjct: 546 VIKPCAVSAVHSSSTARPISSPSVTNKRNEDLVLNLQAR-HSKSDENLQERGMQSQHGTL 604
Query: 597 ADLYKPHEHTSFSFLASVTTDLGL----------------GKIYPSTRQEANTPKLIDN- 639
++ P +H S S A V TDL L ++ S R PK +D+
Sbjct: 605 SNADNPDDHASPSSAAPVETDLVLCTPRDCSSKGSSSTCSKRVEDSERSVHLVPKKVDDL 664
Query: 640 ----------KEQCFSGSISAEFDAVSEGTFHNVVQSSSCS-------APHTGEPFDPRD 682
C SI+ S T H+V + +P + D +
Sbjct: 665 NLKHPQLSVQPNSCSWSSIN--VGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSN 722
Query: 683 YKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
YK L L + VG Q+EA+ I +++ R R R S+ IWL F G D + KK+I
Sbjct: 723 YKLLVERLFKVVGRQEEAVSAICESIVRCRSTESRR--GPSRNDIWLCFHGSDSMAKKRI 780
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A ALAE++ G+K LI++D++ + D+ D RGK +D I ++
Sbjct: 781 AVALAELMHGSKENLIYLDLNLQ---------------DWDDSSFRGKTGIDCIVEQLSK 825
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
K SV+FL+++D+ AD +VQ SL+ AI +G+F D G+ V I+ I V + +++ G S
Sbjct: 826 KRRSVLFLDNIDR-ADCLVQDSLSDAIKSGRFQDMRGKVVDINDSIVVLSRSMIHG--SK 882
Query: 863 HPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPR--------KENSNP 914
+ + FSEE IL + +++ + G A + V V+PR S
Sbjct: 883 NGLEEGLSFSEEKILATRGHRLKILVEPGRAITSGCPSGKVVVSPRHFLTKIQASLCSGS 942
Query: 915 ESRRKRKRTDD----GDSPINSQKQVDDSFRSYLDLNLPADEAE----EDTSSEKFDSDT 966
S+RK +DD +SP +S K++ + DLNLP DE E +D SS +S
Sbjct: 943 ISKRKLSMSDDQEKLQESP-SSLKRLHRTSSIPFDLNLPVDEDEPFDADDDSSSHENSYG 1001
Query: 967 ICENSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILV 1026
E S ++ D F+P +FD LA+ +L+E ++ G E +LEID +
Sbjct: 1002 NTEKS---IDALLHSVDGSINFKPFDFDKLADDMLQEFSNILRKNLGAECMLEIDVGAME 1058
Query: 1027 QILAATWLSDRKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLL--VEEEASG 1084
QILAA W S+ K ++ W+E V RS E++ K+ + S ++LV E L V+ + G
Sbjct: 1059 QILAAAWKSEDKGPVQTWLEQVFARSLDELKLKYKHVSSSTLRLVPCEDTLPTVKGDGLG 1118
Query: 1085 IRLPKII 1091
+ LP I
Sbjct: 1119 VLLPPRI 1125
>gi|255591162|ref|XP_002535454.1| conserved hypothetical protein [Ricinus communis]
gi|223523058|gb|EEF26929.1| conserved hypothetical protein [Ricinus communis]
Length = 398
Score = 431 bits (1108), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/400 (59%), Positives = 290/400 (72%), Gaps = 18/400 (4%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V++ARQCL++E+AR L DAV VAR+R H+QTTSLH VSALL +PSS LR+AC R +
Sbjct: 1 MPTPVSVARQCLTDEAARALQDAVSVARRRSHAQTTSLHAVSALLALPSSTLRDACARAR 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEFPPISNSLMAAIKRSQAQQRRNPDNYHLQ 120
S +LQFRALELC+GV+ DRLPSSK+++ PPISNSLMAAIKRSQA QRR+PDN+HLQ
Sbjct: 61 KSPCSSRLQFRALELCVGVSLDRLPSSKALDEPPISNSLMAAIKRSQANQRRHPDNFHLQ 120
Query: 121 QIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRLS 180
QIHCNQQ S+LKV+LK+F+L+ILDDP+ SRV GEAGF S DIKLAII P +TQ PP+ S
Sbjct: 121 QIHCNQQPPSVLKVELKHFILSILDDPIVSRVLGEAGFRSCDIKLAIIHPPITQ-PPKFS 179
Query: 181 LTRC-PPIFLYNLTDSFPGRAGLKLPF-GPDDV-DENCRRIGEVLAGRDEKKGKNPLLVG 237
+RC PPIFL NL S GR G PF G DD DENCRRIGE L K K+ LL+G
Sbjct: 180 RSRCPPPIFLCNLNGSDVGRGGHGYPFSGYDDRGDENCRRIGEKLG-----KVKSLLLLG 234
Query: 238 VCANSALKGFVESVNGGKVG--LFPRQIYGLDVVCVEYEINEFVGGRVN-----VEMMML 290
VCA+ AL F+E VN G L PR+I GL VV +E EI EFV N E M
Sbjct: 235 VCASDALSRFIECVNSDNKGGFLLPREIVGLSVVSIEKEIIEFVSEGGNDKEKAKEKMGF 294
Query: 291 KFKEVESAVGRCSGPGVVVNYGELKVLVSDSV-STEAARFVVSQLTSLLKSGNGEKLWLI 349
KF+E+ + + +C G GVV+N+GELKVLV ++V S++AA ++V +LT LL+ KLWL+
Sbjct: 295 KFEELRNKLEQCLGVGVVLNFGELKVLVDENVFSSDAASYLVEKLTGLLEDFR-NKLWLM 353
Query: 350 GAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGSF 389
GAA +YETY K L KFP ++ DWDL LLPI S + +F
Sbjct: 354 GAAATYETYSKFLGKFPSIEKDWDLHLLPITSSKSPIDTF 393
>gi|449519683|ref|XP_004166864.1| PREDICTED: uncharacterized protein LOC101231048, partial [Cucumis
sativus]
Length = 702
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 275/715 (38%), Positives = 403/715 (56%), Gaps = 20/715 (2%)
Query: 385 LMGSFVPFGGFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCL 444
L G F F S +F + + S + T C+ CT+K EQEVAA+ K SS +
Sbjct: 1 LHGIFCSIWWIFPSQSNFPSQLSSPNQSFTRCHQCTDKFEQEVAAIWKPGSSTVLGHHSE 60
Query: 445 DNL-TSSDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDI 503
+L S I A K K +DD +A++ K++ LQ+KWND C+ LH+ QL PKLDI
Sbjct: 61 SSLHMSPTEIDA--KCKEFDMYKTRDDRSAMSDKVIGLQKKWNDICR-LHQRQLFPKLDI 117
Query: 504 RQRSHVQLSEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSS 563
H E R + + S + S+ + P QN + +Q I S
Sbjct: 118 SHTMHGVSFESPRFALDHERSGEEPSSVTGDRFVIGHPCLSRDLQNNLNTKQTRQISEIS 177
Query: 564 EANNVNFQSRLPINSSTKPQSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKI 623
+++ NFQS + +S + P P L+ S SF+ SVTTDLGLG +
Sbjct: 178 DSHTDNFQSNIVSGASPGEAESLRIFSKPVVPKGHLHSDKPLPS-SFI-SVTTDLGLGTL 235
Query: 624 YPSTRQEANTPKLIDNKEQCFS-----GSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPF 678
Y S + N K++D + Q S GS E+ S + +N QSS S G+
Sbjct: 236 YASAGE--NKRKIVDLESQKVSIQHLTGSNKTEY---SRPSNNNPGQSSGFSDLSAGQVL 290
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVG 738
D R++K+L AL EKV WQ +A +I + + R R G G+ SNS+ IWL FLGPD +G
Sbjct: 291 DIREFKSLWNALNEKVSWQGKATSSIVETILRCRTGGGKRRSSNSRGDIWLTFLGPDMMG 350
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K+KI+ ALAE++ G++ LI VD S+ R + NS+FDCQ ++ D + RG+ +VDY+
Sbjct: 351 KRKISFALAELMVGSRENLISVDFGSQDRDQRHNSLFDCQGLNGYDERFRGQTVVDYVAG 410
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
E R KP SVV LE++DKA D +S L++AI+TGKF DS+GR +I+ IF+ T
Sbjct: 411 ELRKKPSSVVLLENVDKA-DVRAKSCLSQAIATGKFLDSHGRQFTINNTIFLTTLPNKVK 469
Query: 859 KHSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRR 918
K S +FSE+ IL A+ QMQ + +D ++ NV++T S+ S
Sbjct: 470 KTSNLDSEEQTEFSEDRILAARNCQMQITVQGFTSDVSKCKNTNVRITSAPRGSSNLSIF 529
Query: 919 KRKRTDDGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDF 978
K+++ D+ + + K+ S S+LDLNLP +E E++++ DSD+ E S AW+++F
Sbjct: 530 KKRKLDNEFTEL---KKASSSSMSFLDLNLPLEEVEDESNEGDCDSDSASEGSEAWVDEF 586
Query: 979 FDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRK 1038
+Q D +F+P NFD AEK+++EI +F+R FG EV+LEIDY+I+VQILAA WLS++K
Sbjct: 587 LEQVDEKIMFKPYNFDEAAEKLVKEINLQFRRVFGSEVVLEIDYKIIVQILAAKWLSEKK 646
Query: 1039 KAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIRLPKIINV 1093
A+E W+E V+ RSF E K+ GSV+KLV E ++E++A+GI LP I +
Sbjct: 647 NAMEEWLELVLHRSFVEAEHKYQMGCGSVIKLVCKEDCVMEDQAAGIFLPAKIKL 701
>gi|242082468|ref|XP_002441659.1| hypothetical protein SORBIDRAFT_08g000390 [Sorghum bicolor]
gi|241942352|gb|EES15497.1| hypothetical protein SORBIDRAFT_08g000390 [Sorghum bicolor]
Length = 1128
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 368/1200 (30%), Positives = 564/1200 (47%), Gaps = 185/1200 (15%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLC-VPSSLLREACDRV 59
M T V ARQCL+ + LD AV AR+R H+QTTSLH++++LL + LLR+A R
Sbjct: 1 MPTPVPAARQCLAPPAVTALDAAVASARRRAHAQTTSLHLIASLLAPTAAPLLRDALARA 60
Query: 60 QSYSVSPKLQFRALELCLGVAFDRLPSSKSVEF-PPISNSLMAAIKRSQAQQRRNPDNYH 118
+S + SP+LQ +AL+LC V+ DRLPSS + + PP++NSLMAAIKRSQA QRRNPD +H
Sbjct: 61 RSAAYSPRLQLKALDLCFAVSLDRLPSSSNDQHEPPVANSLMAAIKRSQANQRRNPDTFH 120
Query: 119 L-QQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPP 177
H +A+ +KVDL + VLAILDDP+ SRVF +AGF S +IK+AI++P+ PP
Sbjct: 121 FYHHHHQASASATAVKVDLSHLVLAILDDPLVSRVFADAGFRSNEIKVAILRPA----PP 176
Query: 178 RLSLTRC--------PPIFL--YNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDE 227
L R PP+FL + D + G ++NCRRI ++LA
Sbjct: 177 VPLLARAGLPTRARPPPLFLCSFAAADDADVPSPAPALAGAAPGEDNCRRITDILA---- 232
Query: 228 KKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEM 287
+G+NP+LVGV A + + + P VN +
Sbjct: 233 -RGRNPMLVGV---GAASAAADFAHASPYRVLP----------------------VNHQT 266
Query: 288 MMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVS-TEAARFVVSQLTSLLKSGNG--- 343
+L G G++ G+LK LV D +AAR VV+++T LL++
Sbjct: 267 DLLAAVAAAPTTT--PGSGIIFTIGDLKDLVPDEADLQDAARRVVAEVTRLLETHRAAAR 324
Query: 344 EKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHW---------------------- 381
+ +W++G + +YETYL L+KFP +D DW+LQLLPI
Sbjct: 325 QTVWVMGWSATYETYLAFLSKFPLVDKDWELQLLPITAVRDAGPAPGLVPPPAPVTTVPA 384
Query: 382 -----KSSLMGSFVPFGGFFSSPPDFKNPVRSKSHYSTL-CYLCTEKLEQEVAALLKLES 435
+S + SFVPFGGF + + S L C C ++ EQEVA +++
Sbjct: 385 LSMPATTSFVESFVPFGGFMC------DTYEANSCPQALRCQQCNDRYEQEVATIIR--G 436
Query: 436 SDSVTDQCLDNLTSS-DRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHR 494
S + + L S + + + G K +DD L+ KI L++KWN+ C LH+
Sbjct: 437 SGITAEAHQEGLPSMLHNGSMMGPNNGFDALKVRDDHMVLSTKIQNLKKKWNEYCLRLHQ 496
Query: 495 TQLVPKLDIRQ--RSHVQLSEFVRLMANRKGSSSKY--------PSLCESQCTNPSPGAH 544
D Q R H+ + AN SS PS S TN + A
Sbjct: 497 GCNRINRDPCQLFRHHMDVRVDRERCANPNQSSQSLALQREVIRPSAVSSLHTNTT--AK 554
Query: 545 MLSQNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSNNDEHLLPPHPLADLYKPHE 604
+S S + NA + L+ + +S P+ P +++ ++ P +
Sbjct: 555 SISAPSISTQMNADLALNLQVRQS--KSDEPLQDRAVPSQHSNS--------SNCDNPED 604
Query: 605 HTSFSFLASVTTDLGLGKIYPSTRQEANT----------------PKLIDNKE------- 641
H S S A+VTTDL L S+ ++++ PK +D+
Sbjct: 605 HVSPSSAAAVTTDLALATPRGSSSKDSSNALRKHVEDAEGSIQLMPKKVDDLNLKPPHFS 664
Query: 642 ----QCFSGSISAEFDAVSEGTFHNVVQSSSCS-------APHTGEPFDPRDYKTLRIAL 690
CF S + +D S H + + +P + +D +YK L L
Sbjct: 665 AQPYTCFRSS--SNWDQTSPSALHPAASGGASAFGQWQRPSPLAAQTYDLSNYKLLMERL 722
Query: 691 AEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIV 750
+ VG Q+EA+ I ++ R R R G+N K IW +F GPD + K+++A ALAE++
Sbjct: 723 FKAVGRQEEALSAICASIVRCR-SMERHRGANKKNDIWFSFYGPDSIAKRRVAVALAELM 781
Query: 751 FGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFL 810
+ LI++D+ S+ D N +F RGK D I +E R K SV+FL
Sbjct: 782 HSSSENLIYLDL----------SLHDWGNPNF-----RGKRATDCISEELRKKRRSVIFL 826
Query: 811 EDLDKAADPIVQSSLTKAISTGKFTDSY-GRDVSISGMIFVATSTILKGKHSVH-PQTTP 868
+++DK AD +VQ SL A+ TG++ D + GR ++ I V ++ +++G
Sbjct: 827 DNVDK-ADCLVQESLIHAMETGRYKDLHGGRVADLNDSIVVLSTRMIQGYQDASLGMEQD 885
Query: 869 VKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPES-------RRKRK 921
FSEE ++ A+ Q++ + G A+ SG V V+ R N ++ +++
Sbjct: 886 NAFSEEKVVAARGHQLKIIVEPGTANIGGDSGGKVVVSSRHSLRNSQASLLSSSLSKRKL 945
Query: 922 RTDDG-----DSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSG--AW 974
DG +SP S K++ + DLNLP DEAE + S +S +
Sbjct: 946 HISDGQEKTAESPSTS-KRLHRTSSIPFDLNLPGDEAEAHDGDDDSSSSHENSSSDLEGY 1004
Query: 975 LEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWL 1034
+ + D F+P +F L E I++E + G LEID + Q++AA W
Sbjct: 1005 VGNLLRSVDESINFKPFDFGKLCEDIMQEFSSTMSKTLGSRCRLEIDAVAMEQVVAAAWA 1064
Query: 1035 SD--RKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEG-LLVEEEASGIRLPKII 1091
SD K+ + W+E V RS +++ + + ++LVA E + V+E+ G LP I
Sbjct: 1065 SDSHEKRPVRTWVEQVFARSLEQLKVRCKNLSSCTLRLVACENEMPVKEDGFGAFLPSTI 1124
>gi|326513004|dbj|BAK03409.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1134
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 369/1176 (31%), Positives = 553/1176 (47%), Gaps = 178/1176 (15%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSS-LLREACDRV 59
M T V ARQCLS + LD AV AR+R H+QTTSLH+V+ALL + LLR+A R
Sbjct: 1 MPTPVPAARQCLSPAAVTALDAAVVSARRRVHAQTTSLHLVAALLAQQAPPLLRDALARA 60
Query: 60 QSYSVSPKLQFRALELCLGVAFDRLPSSKSVEF------------PPISNSLMAAIKRSQ 107
+S + SP++Q +ALELC V+ DRLPS+ S PP+SNSLMAAIKRSQ
Sbjct: 61 RSAAYSPRVQLKALELCFAVSLDRLPSASSASASTSASGADEQPEPPVSNSLMAAIKRSQ 120
Query: 108 AQQRRNPDNYHLQQIHCNQQTASL--LKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKL 165
A QRRNPD +H Q + ++V+L +LAILDDP+ SRVF +AGF S DIKL
Sbjct: 121 ANQRRNPDTFHFYHQAAFQAATAASQVRVELSQLLLAILDDPVVSRVFDDAGFRSADIKL 180
Query: 166 AIIQPS-----VTQFPPRLSLTRCPPIFLYNLTDS----FPGRAGLKLPFGPDDVDENCR 216
AI++P+ + + P R R PP+FL + P AG G +EN R
Sbjct: 181 AILRPAPPMPLLGRLPTR---ARPPPLFLCSFAAGDDADVPSPAGSAAGAG----EENGR 233
Query: 217 RIGEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEIN 276
RI E+LA +G+NP+LVGV A SA F + P ++ +
Sbjct: 234 RIAEILA-----RGRNPMLVGVGAASAAADFAAAS--------PYRVLPV---------- 270
Query: 277 EFVGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVS-TEAARFVVSQLT 335
G +++ L V +A+ + G+V++ G+L+ LV D E R VV+++T
Sbjct: 271 ----GPNSIDQTQL---SVAAAMASATS-GLVISVGDLRELVPDDGELQERGRRVVAEVT 322
Query: 336 SLLKSGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHW-------------- 381
+L++ ++W++G + +YETYL L+KFP +D DW+LQLLPI
Sbjct: 323 RVLETHREGRVWVMGWSATYETYLTFLSKFPLVDKDWELQLLPITAVRAGGLMPPATTPP 382
Query: 382 ----KSSLMGSFVPFGGFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSD 437
+SL+ SF PFGG ++ D + + C C ++ EQEV ++K S
Sbjct: 383 ALSKSASLVESFSPFGGLVNNTYDSNSLAVHPGPQTLRCQQCNDRCEQEVTTIVK--GSG 440
Query: 438 SVTDQ-CLDNLTSSDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLH--- 493
DQ L +L + + L+ G+ K +DD L +KI+ LQ+KWN+ C LH
Sbjct: 441 ITADQGGLPSLLQNGSMMGLNN--GLDVIKVRDDQMVLKSKILNLQKKWNEYCLRLHQGS 498
Query: 494 -RTQLVPKLDIRQRSHVQLSEFVRLMANRKGSSSKY-------PSLCESQCTNPSPGAHM 545
R P + V + + R KGS S PS + TN +P +
Sbjct: 499 QRINTGPYQLFPNYAAVPV-DTERATILSKGSESVTLQRDVIRPSAVSATQTNATPKKSV 557
Query: 546 LSQNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSNNDEHLLPPHPLADLYKPHEH 605
+IS+ + +N Q R +S Q + L L+ + +H
Sbjct: 558 SPPSISNQRNEGLV--------LNLQGR---HSKGDEQFQDRHAQLRQEHLSSCHDREDH 606
Query: 606 TSFSFLASVTTDLGLG----------------KIYPSTRQEANTPKLID--NKE------ 641
S S ASV TDL L + + TP +D N E
Sbjct: 607 MSPSAAASVATDLVLSTPRGSSSKGTSSVSWKHAVDAEKSTHLTPNKVDDLNMEPPQPFA 666
Query: 642 QCFSGSISAEFDAVSEGTFHNVVQSSSCS--------APHTGEPFDPRDYKTLRIALAEK 693
Q +S S S H+ + + + D DYK L L +
Sbjct: 667 QPYSSRSSTNMGQTSPSALHSPASGGVSAFGQWRQKPSQLAAQGSDLSDYKLLVERLFKV 726
Query: 694 VGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGN 753
VG Q+EA+ I ++ + R G++ K IW +F G D V K+++A ALAE+V G+
Sbjct: 727 VGRQEEALSAICGSIVGCQ-STERRRGASRKNDIWFSFHGFDSVAKRRVAVALAELVHGS 785
Query: 754 KGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDL 813
+ IH+D+S + D+ RGK +D I +E K V+FL+++
Sbjct: 786 QDSFIHLDLSLQ---------------DWGGSSFRGKTGIDCIVEELSKKRRCVIFLDNI 830
Query: 814 DKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILK--GKHSVHPQTTPVKF 871
DK AD +VQ SL+ A+ TG+F D G++V+I+ I + ++ + + SV + + F
Sbjct: 831 DK-ADCLVQDSLSHAVDTGRFRDMRGKEVAINDSIVILSTRLARCSKNASVGVEEGHI-F 888
Query: 872 SEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKEN----------SNPESRRKRK 921
SEE IL A+ Q++ I G +RGS + KV + S S+RK
Sbjct: 889 SEEKILAARGQQLKILIESGTVITSRGSPSSSKVAASPSHPLTKIQTSVYSGCVSKRKLD 948
Query: 922 RTDDGDSPINSQKQVDDSFRSY---LDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDF 978
+DD + + S R+ DLNLP E+ +S D + ++ ++
Sbjct: 949 ISDDREKLLESPSNPKRPHRTSSVPFDLNLPV--GEDGSSDADGDDSSSNDSPDESIDSL 1006
Query: 979 FDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLS-DR 1037
D F+ +F LA IL+E+ G LE+ + Q+LAA+W+S DR
Sbjct: 1007 LGLVDRAIEFKAFDFGKLANDILQELSNVLGNIMGPGSTLEVGDGAMEQMLAASWVSEDR 1066
Query: 1038 KKAIENWIENVVLRSFYEVRRKHHFTAG-SVVKLVA 1072
++ ++ W+E V RS E++ KH AG S ++LVA
Sbjct: 1067 RRPLQAWLEQVFARSLEELKLKHSKPAGNSALRLVA 1102
>gi|326488024|dbj|BAJ89851.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1134
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 369/1176 (31%), Positives = 552/1176 (46%), Gaps = 178/1176 (15%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSS-LLREACDRV 59
M T V ARQCLS + LD AV AR+R H+QTTSLH+V+ALL + LLR+A R
Sbjct: 1 MPTPVPAARQCLSPAAVTALDAAVVSARRRVHAQTTSLHLVAALLAQQAPPLLRDALARA 60
Query: 60 QSYSVSPKLQFRALELCLGVAFDRLPSSKSVEF------------PPISNSLMAAIKRSQ 107
+S + SP++Q +ALELC V+ DRLPS+ S PP+SNSLMAAIKRSQ
Sbjct: 61 RSAAYSPRVQLKALELCFAVSLDRLPSASSASASTSASGADEQPEPPVSNSLMAAIKRSQ 120
Query: 108 AQQRRNPDNYHLQQIHCNQQTASL--LKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKL 165
A QRRNPD +H Q + ++V+L +LAILDDP+ SRVF +AGF S DIKL
Sbjct: 121 ANQRRNPDTFHFYHQAAFQAATAASQVRVELSQLLLAILDDPVVSRVFDDAGFRSADIKL 180
Query: 166 AIIQPS-----VTQFPPRLSLTRCPPIFLYNLTDS----FPGRAGLKLPFGPDDVDENCR 216
AI++P+ + + P R R PP+FL + P AG G +EN R
Sbjct: 181 AILRPAPPMPLLGRLPTR---ARPPPLFLCSFAAGDDADVPSPAGSAAGAG----EENGR 233
Query: 217 RIGEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEIN 276
RI E+LA +G+NP+LVGV A SA F + P ++ +
Sbjct: 234 RIAEILA-----RGRNPMLVGVGAASAAADFAAAS--------PYRVLPV---------- 270
Query: 277 EFVGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVS-TEAARFVVSQLT 335
G +++ L V +A+ + G+V++ G+L+ LV D E R VV+++T
Sbjct: 271 ----GPNSIDQTQLS---VAAAMASATS-GLVISVGDLRELVPDDGELQERGRRVVAEVT 322
Query: 336 SLLKSGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHW-------------- 381
+L++ ++W++G + +YETYL L+KFP +D DW+LQLLPI
Sbjct: 323 RVLETHREGRVWVMGWSATYETYLTFLSKFPLVDEDWELQLLPITAVRAGGLMPPATTPP 382
Query: 382 ----KSSLMGSFVPFGGFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSD 437
+SL+ SF PFGG ++ D + + C C ++ EQEV ++K S
Sbjct: 383 ALSKSASLVESFSPFGGLVNNTYDSNSLAVHPGPQTLRCQQCNDRCEQEVTTIVK--GSG 440
Query: 438 SVTDQ-CLDNLTSSDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLH--- 493
DQ L +L + + L+ G+ K +DD L +KI+ LQ+KWN+ C LH
Sbjct: 441 ITADQGGLPSLLQNGSMMGLNN--GLDVIKVRDDQMVLKSKILNLQKKWNEYCLRLHQGS 498
Query: 494 -RTQLVPKLDIRQRSHVQLSEFVRLMANRKGSSSKY-------PSLCESQCTNPSPGAHM 545
R P + V + + R KGS S PS + TN +P +
Sbjct: 499 QRINTGPYQLFPNYAAVPV-DTERATILSKGSESVTLQRDVIRPSAVSATQTNATPKKSV 557
Query: 546 LSQNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSNNDEHLLPPHPLADLYKPHEH 605
+IS+ + +N Q R +S Q + L L+ + +H
Sbjct: 558 SPPSISNQRNEGLV--------LNLQGR---HSKGDEQFQDRHAQLRQEHLSSCHDREDH 606
Query: 606 TSFSFLASVTTDLGLG----------------KIYPSTRQEANTPKLID--NKE------ 641
S S ASV TDL L + + TP +D N E
Sbjct: 607 MSPSAAASVATDLVLSTPRGSSSKGTSSVSWKHAVDAEKSTHLTPNKVDDLNMEPPQPFA 666
Query: 642 QCFSGSISAEFDAVSEGTFHNVVQSSSCS--------APHTGEPFDPRDYKTLRIALAEK 693
Q +S S S H+ + + + D DYK L L +
Sbjct: 667 QPYSSRSSTNMGQTSPSALHSPASGGVSAFGQWRQKPSQLAAQGSDLSDYKLLVERLFKV 726
Query: 694 VGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGN 753
VG Q+EA+ I ++ + R G++ K IW +F G D V K+++A ALAE+V G+
Sbjct: 727 VGRQEEALSAICGSIVGCQ-STERRRGASRKNDIWFSFHGFDSVAKRRVAVALAELVHGS 785
Query: 754 KGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDL 813
+ IH+D+S + D+ RGK +D I +E K V+FL+++
Sbjct: 786 QDSFIHLDLSLQ---------------DWGGSSFRGKTGIDCIVEELSKKRRCVIFLDNI 830
Query: 814 DKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILK--GKHSVHPQTTPVKF 871
DK AD +VQ SL+ A+ TG+F D G++V+I+ I + ++ + + SV + + F
Sbjct: 831 DK-ADCLVQDSLSHAVDTGRFRDMRGKEVAINDSIVILSTRLARCSKNASVGVEEGHI-F 888
Query: 872 SEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKEN----------SNPESRRKRK 921
SEE IL A+ Q++ I G +RGS + KV + S S+RK
Sbjct: 889 SEEKILAARGQQLKILIESGTVITSRGSPSSSKVAASPSHPLTKIQTSVYSGCVSKRKLD 948
Query: 922 RTDDGDSPINSQKQVDDSFRSY---LDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDF 978
+DD + + S R+ DLNLP E+ +S D + ++ ++
Sbjct: 949 ISDDREKLLESPSNPKRPHRTSSVPFDLNLPV--GEDGSSDADGDDSSSNDSPDESIDSL 1006
Query: 979 FDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLS-DR 1037
D F+ +F LA IL+E+ G LE+ + Q+LAA+W S DR
Sbjct: 1007 LGLVDRAIEFKAFDFGKLANDILQELSNVLGNIMGPGSTLEVGDGAMEQMLAASWASEDR 1066
Query: 1038 KKAIENWIENVVLRSFYEVRRKHHFTAG-SVVKLVA 1072
++ ++ W+E V RS E++ KH AG S ++LVA
Sbjct: 1067 RRPLQAWLEQVFARSLEELKLKHSKPAGNSALRLVA 1102
>gi|413915851|gb|AFW55783.1| hypothetical protein ZEAMMB73_843327 [Zea mays]
Length = 1120
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 361/1208 (29%), Positives = 563/1208 (46%), Gaps = 209/1208 (17%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLC-VPSSLLREACDRV 59
M T V ARQCLS + LD AV AR+R H+QTTSLH++++LL + LLR+A R
Sbjct: 1 MPTPVPAARQCLSPPAVTALDAAVASARRRAHAQTTSLHLIASLLAPTAAPLLRDALARA 60
Query: 60 QSYSVSPKLQFRALELCLGVAFDRLPSSKSV------EFPPISNSLMAAIKRSQAQQRRN 113
+S + SP+LQ +AL+LC V+ DRLPS+ + PP++NSLMAAIKRSQA QRRN
Sbjct: 61 RSAAYSPRLQLKALDLCFAVSLDRLPSTPTSASTPTSHEPPVANSLMAAIKRSQANQRRN 120
Query: 114 PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPS-- 171
PD +H + + +KVDL + VLAILDDP+ SRVF +AGF S +IK+AI++P+
Sbjct: 121 PDTFHFYHHQAAPTSPNAIKVDLSHLVLAILDDPLVSRVFADAGFRSNEIKVAILRPAPP 180
Query: 172 ---VTQFPPRLSLTRCPPIFL--YNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRD 226
+ + P R R PP+FL + D + G ++NCRRI ++LA
Sbjct: 181 VPLLGRLPTR---ARPPPLFLCSFAAADDADVPSPAPALAGAAPGEDNCRRITDILA--- 234
Query: 227 EKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVE 286
+G+NP+LVGV A SA F ++ Y I N
Sbjct: 235 --RGRNPMLVGVGAASAAADFAKAS--------------------PYRIVPIGPASAN-- 270
Query: 287 MMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTE-AARFVVSQLTSLLKSG---- 341
A G++ + G+LK LV D + AAR VV+++T LL++
Sbjct: 271 ---------NQAAPTTPTSGLIFSIGDLKDLVPDEADLQDAARRVVAEVTRLLETHRPAA 321
Query: 342 -NGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHW------------------- 381
+ +W++G + +YETYL L+KFP +D DW+LQLLPI
Sbjct: 322 RQTQTVWVMGWSATYETYLAFLSKFPLVDKDWELQLLPITAVRDAGPAAGLVPPPPAPAT 381
Query: 382 ---------KSSLMGSFVPFGGFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLK 432
+S SFVPFGG + + + + C C ++ EQEVA++++
Sbjct: 382 TVAALSMPATTSFAESFVPFGGLLCDTYEANSLTTNFCPQALRCQHCNDRYEQEVASIIR 441
Query: 433 LESSDSVTDQCLDNLTSSDRIAALDTSKG-VGTAKAKDDVTALNAKIMELQRKWNDTCQS 491
S D + L S + + S K +DD L+ KI+ L++KWN+ C
Sbjct: 442 --GSGVTADAHQEGLPSLLQNGGMMGSNNEFDAVKVRDDQMVLSTKILNLEKKWNEYCVR 499
Query: 492 LHR---------TQLVPKLDIRQRSHVQLSEFVRLMANRKGSSSKYPSLCESQ------C 536
LH+ QL P H+ VR+ R + ++ Q C
Sbjct: 500 LHQGCNRINRDPCQLFPH-------HIG----VRVDRERCANPNQSAQTIALQRDIIKPC 548
Query: 537 TNPSPGAHMLSQNISSAEQ-NATIPLSSEANNVNFQSRLPINSSTKPQSNNDEHLLPPHP 595
SP ++ +++IS+ +Q NA + L+ + +S P+ S P + +
Sbjct: 549 ALSSPYTNITAKSISAPDQINADLVLNLQVRQS--RSNEPLQSGVVPFQHINS------- 599
Query: 596 LADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEAN------------TPKLIDNK--- 640
++ KP E ++ A VTTDL L S+ ++++ T +L+ NK
Sbjct: 600 -SNYNKPEESSA----APVTTDLVLATPRGSSFKDSSSALCKRVEDIEETIQLMPNKVDD 654
Query: 641 -----------EQCFSGSISAEFDAVSEGTFHNVVQSSSCS-------APHTGEPFDPRD 682
S S S+ ++ S H+ + + +P + FD +
Sbjct: 655 LNLKPPHLSIQPYTCSKSSSSNWEQTSPSALHSTSLGGTSAFGQWQRPSPLATQSFDLSN 714
Query: 683 YKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
YK L L + VG Q+EA+ I ++ R R R G+N K IW +F GPD + K+++
Sbjct: 715 YKLLMEHLFKVVGRQEEALSAICASIVRCR-SMERRRGANKKNDIWFSFYGPDSIAKRRV 773
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
ALAE++ G+ G LI++D+S D+ + RGK D I++E R
Sbjct: 774 GVALAELMHGSSGNLIYLDLSLN---------------DWGNPSFRGKRATDCIFEELRK 818
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSY-GRDVSISGMIFVATSTILKGKHS 861
K SV+FL+++DK AD +VQ SL A+ TG++ D + GR ++ I V ++ +++G
Sbjct: 819 KRRSVIFLDNIDK-ADCLVQESLIHAMETGRYKDLHGGRVTDLNDSIVVLSTRMIQGCQD 877
Query: 862 VHPQTTPVK-FSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKE----NSNPES 916
FSEE + A+ Q++ + G + G NV V+ R ++ S
Sbjct: 878 ASLGVEEGNAFSEEKAVAARGHQLKIIVEPGTTNIG---GGNVVVSSRHSLGSSEASSYS 934
Query: 917 RRKRKRTDDG----DSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSG 972
+++ DG + ++ K++ + DLNLP D+ E + S EN
Sbjct: 935 SKRKLHISDGQEKTEESASTSKRLHRTSSIPFDLNLPGDDEEAHDDGDDDKSSGSHEN-- 992
Query: 973 AWLE----DFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFE-VLLEIDYEILVQ 1027
+LE + D F+P +F L E IL+E + G LEID + Q
Sbjct: 993 -YLEGSVGNLLRWVDGSINFKPFDFGKLCEDILQEFSNTTSKILGTRGCRLEIDAGAMEQ 1051
Query: 1028 ILAATWLSD----RKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLLVEEEAS 1083
++AA W SD K+ + W+E V RS +V+ + + ++LV+ E V+E+
Sbjct: 1052 VVAAAWASDSHENEKRPVRTWVEQVFGRSLEQVKMRCENLSSCTLRLVSCE---VKEDGF 1108
Query: 1084 GIRLPKII 1091
G LP I
Sbjct: 1109 GALLPSRI 1116
>gi|147783009|emb|CAN72301.1| hypothetical protein VITISV_024923 [Vitis vinifera]
Length = 1166
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 273/733 (37%), Positives = 384/733 (52%), Gaps = 55/733 (7%)
Query: 385 LMGSFVPFGGFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCL 444
LM SFVP GGFFSSP + K + +++ C+ C EK EQEVAAL K + SV DQ
Sbjct: 460 LMESFVPLGGFFSSPCELKGQLSGSYQFTSRCHQCNEKCEQEVAALSKGGFTASVADQYQ 519
Query: 445 DNLTSSDRIAALDTSKGVGTAKAKDD-VTALNAKIMELQRKWNDTCQSLHRTQLVPKLDI 503
NL + ++A L AKAKDD + LNAKIM LQ+KW++ CQ L TQ PK D
Sbjct: 520 PNLPAWLQMAELGKXTAFDVAKAKDDGMLLLNAKIMGLQKKWDNICQRLQHTQPFPKADF 579
Query: 504 -RQRSHV------QLSEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQN 556
R S V Q + + A+ SS S +S C + + M Q + + +
Sbjct: 580 YRVGSQVPSVVGFQAVKDSKENADNHRSSKTNASPSDSGCKHANSCVSMDLQKVPESTPS 639
Query: 557 ATIPLSSEANNVNFQSRLPINSSTKPQSNNDEH---LLPPHPLADLYKPHEHTSFSFLAS 613
+PL S+ N +F S+L + S +EH L L+ TS + + S
Sbjct: 640 TPLPLVSK--NESFLSKL-----FEKSSKTEEHEPGSLQSRTLSTSSVGDGRTSPTSVNS 692
Query: 614 VTTDLGLGKIYPSTRQEANTPK------LIDNKEQCFSGSISAEFDAVSEGTFHNVVQSS 667
VTTDLGLG YP ++Q K L D FS A D V+ + S
Sbjct: 693 VTTDLGLGLFYPPSKQLKKDAKQTHLGPLPD-----FSSRYPANVDLVNGSISNPSSSCS 747
Query: 668 SCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGI 727
+ G+ D RD+KTL AL E++ WQ EAI IS+ ++ R+GN + G++ K I
Sbjct: 748 CPDS--WGQS-DQRDFKTLFRALTERIDWQHEAISVISETIAHCRLGNEKRHGASPKGDI 804
Query: 728 WLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKL 787
W F+GPD+ KKKIA ALAEI++G + I VD+SS+ + ++ Q ++ + K
Sbjct: 805 WFNFVGPDRFSKKKIAVALAEILYGRRESFICVDLSSQDGMIHKSANHGSQEMNGYNVKF 864
Query: 788 RGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
RGK +VDYI E KP SVVFLE++D+ AD + ++SL AI+TGKF DS+GR+VSI+
Sbjct: 865 RGKNVVDYIAGELSKKPLSVVFLENVDQ-ADLLARNSLFHAINTGKFCDSHGREVSINNA 923
Query: 848 IFVATSTILKGKHSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAAR---GSGMNVK 904
FV T+ +G + P K+SEE I AK MQ I + + G +++
Sbjct: 924 TFVTTARFRQGDKVLSSGKEPAKYSEERISRAKGLPMQILIGYSHREDDHDNFGHSLSLS 983
Query: 905 VTPRKENSNPESRRKRKRTDDGDSPINSQ-----KQVDDSFRSYLDLNLPADEAE-EDTS 958
+T SN KRK ++ S+ K+ + +YLDLNLPA+E E +D
Sbjct: 984 ITTNNGISNQIFLNKRKLVGSSETLEQSETSEMAKRAHKASNTYLDLNLPAEENEGQDAD 1043
Query: 959 SEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLL 1018
D+D VF+P +FD LAEK+LREI F G E LL
Sbjct: 1044 HVDPDND-------------IPPLKTPVVFKPFDFDALAEKVLREISKTFHETIGPESLL 1090
Query: 1019 EIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLLV 1078
EI+ +++ QILAA SDR A+ +W+E V+ R F E R++++ TA VVKLV EG+ +
Sbjct: 1091 EINTKVMEQILAAACSSDRTGAVGDWVEQVLSRGFAEARKRYNLTAHCVVKLVPCEGIFM 1150
Query: 1079 EEEASGIRLPKII 1091
E++A G+ LP I
Sbjct: 1151 EDQAPGVWLPSRI 1163
Score = 362 bits (929), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 200/383 (52%), Positives = 266/383 (69%), Gaps = 10/383 (2%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V+LARQCL+ E+A LD+AVGVAR+R H+QTTSLH VSA+L +PSSLLR+AC R +
Sbjct: 1 MPTSVSLARQCLTPEAAHALDEAVGVARRRGHAQTTSLHAVSAMLSLPSSLLRDACARAR 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEFPPISNSLMAAIKRSQAQQRRNPDNY--H 118
+ + S +LQF+ALELCL V+ DR+PS++ + PP+SNSLMAAIKRSQA QRR P+N+ +
Sbjct: 61 NSAYSARLQFKALELCLSVSLDRVPSTQLADDPPVSNSLMAAIKRSQANQRRQPENFQLY 120
Query: 119 LQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPR 178
Q + + S +KV+L++ +L+ILDDP+ SRVFGEAGF S DIKLAI++P R
Sbjct: 121 QQLQQQSSSSISCIKVELQHLILSILDDPVVSRVFGEAGFRSCDIKLAIVRPLPQLL--R 178
Query: 179 LSLTRCPPIFLYNLTDSFPGRAGLKLPF-GPDDVDENCRRIGEVLAGRDEKKGKNPLLVG 237
S +R PP+FL N DS P R P+ G DENC+RIGEVL GR KG+NPLLVG
Sbjct: 179 YSRSRGPPLFLCNFIDSDPSRRSFSFPYSGFFTGDENCKRIGEVL-GRG--KGRNPLLVG 235
Query: 238 VCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKFKEVES 297
VCA AL+ F E V G+ + P +I GL ++C+E ++ F + ++ +F+EV
Sbjct: 236 VCAYDALQSFTEMVEKGRYNILPVEISGLSIICIEKDVLRFFNENCDQGLINSRFEEVGV 295
Query: 298 AVGRCSGPGVVVNYGELKVLVS-DSVSTEAARFVVSQLTSLLKSGNGEKLWLIGAAMSYE 356
V C G G+VVN+G+LKV + D S +VVSQLT LL+ +G K+ L+GA SYE
Sbjct: 296 LVQHCLGAGLVVNFGDLKVFIDRDDASVGVVSYVVSQLTRLLEI-HGGKVRLMGAVSSYE 354
Query: 357 TYLKMLAKFPGLDNDWDLQLLPI 379
TYLK L ++P ++ DWDLQLLPI
Sbjct: 355 TYLKFLNRYPSIEKDWDLQLLPI 377
>gi|242067163|ref|XP_002448858.1| hypothetical protein SORBIDRAFT_05g000365 [Sorghum bicolor]
gi|241934701|gb|EES07846.1| hypothetical protein SORBIDRAFT_05g000365 [Sorghum bicolor]
Length = 1050
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 345/1155 (29%), Positives = 531/1155 (45%), Gaps = 190/1155 (16%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLC-VPSSLLREACDRV 59
M T V ARQCL+ + LD AV AR+R H+QTTSLH++++LL + LLR+A R
Sbjct: 1 MPTPVPAARQCLAPPAVTALDAAVASARRRAHAQTTSLHLIASLLAPTAAPLLRDALARA 60
Query: 60 QSYSVSPKLQFRALELCLGVAFDRLPSSKSVEF---------PPISNSLMAAIKRSQAQQ 110
+S + SP+LQ +AL+LC V+ DRLPS+ + PP++NSLMAAIKRSQA Q
Sbjct: 61 RSAAYSPRLQLKALDLCFAVSLDRLPSTPTSSSASSSNDQHEPPVANSLMAAIKRSQANQ 120
Query: 111 RRNPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQP 170
RRNPD +H H +Q AS +SRVF +AGF S +IK+AI++P
Sbjct: 121 RRNPDTFHFYHHH-HQAAASPTP---------------SSRVFADAGFRSNEIKVAILRP 164
Query: 171 SVTQFPPRLSLTRC--------PPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVL 222
+ PP L R PP+FL + + A + P G ++NCRRI ++L
Sbjct: 165 A----PPVPLLARAGLPTRARPPPLFLCSFAAA--DDADVPSPAGAAPGEDNCRRIADIL 218
Query: 223 AGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGR 282
A +G+NP+LVGV A SA F + P +I + V + +
Sbjct: 219 A-----RGRNPMLVGVGAASAAADFANAS--------PYRILPVGPASVNQNQTDLL--- 262
Query: 283 VNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVS-TEAARFVVSQLTSLL--- 338
AV G G++ + G+LK LV D +AAR VV+++T LL
Sbjct: 263 ---------------AVA-TPGSGIIFSIGDLKDLVPDEADLQDAARRVVAEVTRLLETH 306
Query: 339 KSGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHW----------------- 381
++ +W++G + +YETYL L+KFP +D DW+LQLLPI
Sbjct: 307 RAAGRHTVWVMGWSATYETYLAFLSKFPLVDKDWELQLLPITAVRDARPCSRTRASSSSS 366
Query: 382 -----------KSSLMGSFVPFGGFFSSPPDFKNPVRSKSHYSTL-CYLCTEKLEQEVAA 429
+S M SFVPFGGF +P + S L C C ++ EQEVA
Sbjct: 367 KPRLLPCPMPATTSFMESFVPFGGFLC------DPYEANSCPQALRCQQCNDRYEQEVAT 420
Query: 430 LLKLESSDSVTDQCLDNLTSS-DRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDT 488
+++ S + D L S + + + G K +DD L+ KI L++KWN+
Sbjct: 421 IIR--GSGITAEAHQDGLPSMLQNGSMMGPNNGFDVLKVRDDQMVLSTKIQNLKKKWNEY 478
Query: 489 CQSLHRTQLVPKLDIRQ--RSHVQLSEF-VRLMANRKGSSSKYPSLCESQCTNPSPGAHM 545
C LH+ D Q R H+ + + L+ N + SK + + P H
Sbjct: 479 CLRLHQGCNRINRDPCQLFRHHIDVRQINADLVLNLQVRQSKSDEPLQDRAV---PSQHS 535
Query: 546 LSQNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSNNDEHLLPPHPLADLYKPHEH 605
S + + E +A S+ + + P SS+K
Sbjct: 536 NSSHCDNPEDHAAP-SSAAPVATDLELATPRGSSSK-----------------------D 571
Query: 606 TSFSFLASVTTDLGLGKIYPSTRQEAN-TPKLIDNKEQCFSGSISAEFDAVSEGTFHNVV 664
+S + V G ++ P + N P CF S++ D S H+
Sbjct: 572 SSIALCKHVKDAEGSIQLMPKKVDDLNLKPHFSVQPYTCFRSSLNR--DQTSPSALHSAA 629
Query: 665 QSSSCS-------APHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGR 717
+ + +P + +D +YK L L + VG Q+EA+ I ++ R R R
Sbjct: 630 SGGASAFGQWQRPSPLPAQSYDLSNYKLLMERLFKAVGRQEEALSAICASIERCR-SMER 688
Query: 718 DVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC 777
G+N K IW +F GPD + K+++ ALAE++ G LI++D+ S+ D
Sbjct: 689 RRGANKKNDIWFSFYGPDSIAKRRVGEALAELMHGGSENLIYLDL----------SLHDW 738
Query: 778 QNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDS 837
N +F RGK D I +E R K +SV+FL+++D+ AD +VQ SL A+ TG++ D
Sbjct: 739 GNPNF-----RGKRATDCIAEELRKKRHSVIFLDNIDR-ADCLVQESLIHAMETGRYKDL 792
Query: 838 Y-GRDVSISGMIFVATSTILKG-KHSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADA 895
+ GR ++ I V ++ +++G + + FSEE ++ A+ Q++ + G A+
Sbjct: 793 HGGRVADLNNSIVVLSTRMIQGCQDASLGMEEDNAFSEEKVVAARGHQLKIIVEPGTANI 852
Query: 896 ARGSGMNVKVTPRKENSNPE--------SRRKRKRTD----DGDSPINSQKQVDDSFRSY 943
G V V+ R N + S+RK +D +SP S++ S +
Sbjct: 853 GEDPGGKVVVSSRHSLRNSQASLFSSSLSKRKLHISDGQEKTAESPSTSKRLHRRSSVPF 912
Query: 944 LDLNLPADEAE--EDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNFDLLAEKIL 1001
DLNLP DEAE + + + + + D F+P +F L E IL
Sbjct: 913 -DLNLPGDEAEAHDGDDDSSSSHENSSGDPEGSVGNLLRSVDESINFKPFDFGKLCEDIL 971
Query: 1002 REIQPKFQRAFGFEVLLEIDYEILVQILAATWLSD--RKKAIENWIENVVLRSFYEVRRK 1059
+E + G LEID + Q++AA W SD K+ + W+E V R+ +++ +
Sbjct: 972 QEFSSTMSKTLGSRCRLEIDAVAMEQVVAAAWASDSHEKRPVRTWVEQVFARTLEQLKVR 1031
Query: 1060 HHFTAGSVVKLVAHE 1074
+ S ++LVA E
Sbjct: 1032 CKNLSSSTLRLVACE 1046
>gi|357157735|ref|XP_003577897.1| PREDICTED: uncharacterized protein LOC100845733 [Brachypodium
distachyon]
Length = 1122
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 364/1203 (30%), Positives = 560/1203 (46%), Gaps = 197/1203 (16%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALL--CVPSS--LLREAC 56
M T V ARQCL+ + LD AV AR+R H+QTTSLH++S+LL PSS LLR+A
Sbjct: 1 MPTPVAAARQCLAPAAVAALDSAVVSARRRAHAQTTSLHLISSLLSPAAPSSPPLLRDAL 60
Query: 57 DRVQSYSVSPKLQFRALELCLGVAFDRLPSSKSV--------EFPPISNSLMAAIKRSQA 108
R +S + +P++Q +ALELC V+ DRLPS+ + + PP+SNSLMAA+KR ++
Sbjct: 61 ARARSAAYAPRVQLKALELCFAVSLDRLPSASAASSSSSAESDEPPVSNSLMAAVKR-RS 119
Query: 109 QQRRNPDN----YHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIK 164
QRR P +H + +AS +KV+L VLAILDDP+ SRVFG+AGF S DIK
Sbjct: 120 HQRRTPTPSVYVHHNHALSTRAASASQVKVELSQLVLAILDDPVVSRVFGDAGFRSADIK 179
Query: 165 LAIIQPSVTQFPPRLSLT-RCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLA 223
LAI++P+ PP L R PP+FL + + P +ENCRRI EVLA
Sbjct: 180 LAILRPA----PPIPMLAGRPPPLFLCSFAAADDADVPCSSPAAATGEEENCRRIAEVLA 235
Query: 224 GRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRV 283
+G+NP+LVGV A SA F + P +I + +
Sbjct: 236 -----RGRNPMLVGVGAASAAADFAAAS--------PYRILPVGLDLASMAAAATSSSSS 282
Query: 284 NVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGN- 342
V + + KE+ VV + GEL+ EA R V+++T +L++
Sbjct: 283 GVIISVGDLKEL-----------VVPDDGELQ---------EAGRRTVAEVTRVLETHRA 322
Query: 343 GEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHW--------------------- 381
G ++W++G + +YETYL L+KFP LD DW+LQLLPI
Sbjct: 323 GRRVWVMGWSATYETYLTFLSKFPLLDKDWELQLLPITAVRSAAAAGLMPLATTAVAFSK 382
Query: 382 KSSLMGSFVPFGGFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTD 441
S M SFVPFGG + D + + + C C ++ +QEVA +++ S + D
Sbjct: 383 PPSFMESFVPFGGVTNDGYDANSLAANSCPQALRCQHCNDRYDQEVATIIR-GSGITAED 441
Query: 442 QCLDNLTSSDRIAAL-DTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPK 500
L S + ++ + G K +DD L +KI LQ KWN+ C LH+
Sbjct: 442 HHQGGLPSLLQNGSMIGPNNGFDALKVRDDQMVLKSKIRNLQTKWNEYCLRLHQGCQ--- 498
Query: 501 LDIRQRSHVQLSEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQN--------ISS 552
I + S+ S ++ + A+R+ + NPS G ++ + +
Sbjct: 499 -RINRGSYQLFSNYIPVPADRE------------RPANPSKGPESVALQREVIRPLVVPA 545
Query: 553 AEQNAT---IPLSSEANNVNFQSRLPINSSTKPQSNNDEHLLP------PHPLADLYKPH 603
++ NAT I S + + S L + +S S DEHL L++ +
Sbjct: 546 SQMNATTKSISPPSISKQSHEDSVLKLQAS---HSKGDEHLQDRGVQSRHENLSNFHDCE 602
Query: 604 EHTSFSFLASVTTDLGLGKIYPSTRQEANT-------------PKLIDN----KEQCFSG 646
+H S S SV TDL LG S+ + N+ PK +++ Q F+
Sbjct: 603 DHVSPS---SVATDLVLGTPRGSSSKGTNSACWKQSVDAELSIPKKVNDLNLKPPQVFAQ 659
Query: 647 SISAEFDAVSEG-----TFHNVVQSSSCSAPHTGEPF-------DPRDYKTLRIALAEKV 694
+ + + G H+ + H +P D + K L +L + V
Sbjct: 660 PYACSRSSTNMGQPSPSALHSAASGGMSAFGHWQKPSHLAAQGSDLSNSKQLVESLFKVV 719
Query: 695 GWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNK 754
G Q+EA+ I ++++ W R G+N K IW +F G D + K+K+ ALAE++ G+K
Sbjct: 720 GRQEEALKAICESIA-WCKSMERRRGANRKNDIWFSFHGSDSMAKRKVGVALAELLHGSK 778
Query: 755 GKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLD 814
+I++D+S + D+ D RGK D I E K SV+FL+++D
Sbjct: 779 ENMIYLDLSPQ---------------DWGDSSYRGKTGTDCIVDELSKKRRSVIFLDNVD 823
Query: 815 KAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV-------HPQTT 867
K AD +VQ +L A TG+F D G++V I+ + V ++ +G SV H
Sbjct: 824 K-ADCLVQDTLIHASETGRFRDLRGKEVDINDSVVVLSTRTARGSKSVPFGVEDGH---- 878
Query: 868 PVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPE-------SRRKR 920
FSEE IL A+ Q++ + +RG V V+PR + + S KR
Sbjct: 879 --TFSEEKILAARGHQLKLLVESDMV-ISRGPSGKVSVSPRHPLTKIQASLYSGSSISKR 935
Query: 921 KRTDDGDSPINSQKQVDDSFRSY------LDLNLPADEAEEDTSSEKFDSDTICENSG-- 972
K D + Q+ S R + DLNLP D+ + + S+ +
Sbjct: 936 KLNISDDQELKQQESPSISKRLHRTSSVPFDLNLPMDDDGSNDADNHSSSNDNSSGTPER 995
Query: 973 AWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAAT 1032
+ ++ D F+P +F+ +A+ L+E+ + G L++D + Q+LA
Sbjct: 996 SSIDSLLCSVDESVDFKPFDFNKVADDTLQELSDTLRGVLGPGCTLQVDVGAMDQMLAVA 1055
Query: 1033 WLS-DRKKAIENWIENVVLRSFYEVRRK-HHFTAGSVVKLVAHEGL--LVEEEASGIRLP 1088
W S + K+ ++ W+E V RS E++ K S ++LVA E + + E + G LP
Sbjct: 1056 WTSLEGKRPLQAWLEQVFSRSLEELKLKCGKHACSSTLRLVACEDIAGVKEHDGFGGLLP 1115
Query: 1089 KII 1091
I
Sbjct: 1116 SRI 1118
>gi|395146545|gb|AFN53698.1| fatty acid desaturase 3a [Linum usitatissimum]
Length = 901
Score = 358 bits (920), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 223/470 (47%), Positives = 289/470 (61%), Gaps = 47/470 (10%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M + VT ARQCL++E+AR LDDAV VAR+R HSQTTSLH VSALL +PSS LR+AC R +
Sbjct: 1 MPSPVTTARQCLTDEAARALDDAVAVARRRSHSQTTSLHAVSALLALPSSSLRDACFRSR 60
Query: 61 SYSVS---PKLQFRALELCLGVAFDRLPSSKSVEFPPISNSLMAAIKRSQAQQRRNPDNY 117
S P+LQFRALELC+GV+ DRLPSSKS + P ISN+LMAAIKRSQA QRR+PD++
Sbjct: 61 ISSSDYPPPRLQFRALELCVGVSLDRLPSSKSADEPLISNALMAAIKRSQANQRRHPDSF 120
Query: 118 HLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPP 177
HLQQIH Q +++KV+LK+F+ +ILDDP+ SRVFGEAGF+S IK I+ P + P
Sbjct: 121 HLQQIHFGNQAPAVIKVELKHFIGSILDDPVVSRVFGEAGFISYQIKSVILSPPLLLQTP 180
Query: 178 RLSLTRC--PPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEKKGKNPLL 235
R + P F NL S PG G F DD EN RRIGEV+ + E KGKNPLL
Sbjct: 181 RFPRSGLLPPSFFSRNLGASDPG-FGFGFSFS-DDGAENSRRIGEVMV-KPEGKGKNPLL 237
Query: 236 VGVCANSALKGFVESV--------NGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEM 287
+G CA+ ALK FVE V +GG P +I G+ VV +E + E G+
Sbjct: 238 LGACASDALKRFVERVKNNSKGNSSGGGGSSLPSEIAGISVVVIESDEEE--TGQ----- 290
Query: 288 MMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLW 347
KF ++ A+ CSG G+V ++G+L+VL+ A ++VS+LT+LL+ EKLW
Sbjct: 291 ---KFDKMGRALEACSGRGIVASFGDLEVLIGGDDDDTAGSYMVSKLTTLLEMFK-EKLW 346
Query: 348 LIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGSFVPFGGFFSSPPDFKNPVR 407
LIGAA SY+ Y K L +FP ++ DWDLQLLPI SS P GF
Sbjct: 347 LIGAAASYDVYSKFLKRFPAVEKDWDLQLLPITSSSS------PVSGF-----------G 389
Query: 408 SKSHYSTLCYLCTEKLEQE---VAALLKLESSDSVTDQCLDNLTSSDRIA 454
SKS T+ T +++++ V L +E +D +T L S + A
Sbjct: 390 SKSRGKTVIDYITAEMKKKPRSVTFLENVEQADLLTRASLSQAVSKGKFA 439
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 73/100 (73%), Gaps = 1/100 (1%)
Query: 786 KLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSIS 845
K RGK ++DYI E + KP SV FLE++++A D + ++SL++A+S GKF DSYGR++S S
Sbjct: 391 KSRGKTVIDYITAEMKKKPRSVTFLENVEQA-DLLTRASLSQAVSKGKFADSYGREISTS 449
Query: 846 GMIFVATSTILKGKHSVHPQTTPVKFSEEIILGAKRWQMQ 885
+IF+ T++ + G + + VK++EE ILGAKRWQMQ
Sbjct: 450 NVIFITTTSAMVGDTDLSHENKTVKYTEESILGAKRWQMQ 489
>gi|224112499|ref|XP_002316210.1| predicted protein [Populus trichocarpa]
gi|222865250|gb|EEF02381.1| predicted protein [Populus trichocarpa]
Length = 468
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 210/451 (46%), Positives = 281/451 (62%), Gaps = 44/451 (9%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T VT ARQCL+EE+ LD+AV VAR+R H QTTSLH VSALL +PSS LR+AC R +
Sbjct: 1 MPTPVTTARQCLTEEAGHALDEAVNVARRRGHGQTTSLHAVSALLSLPSSPLRDACARAR 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSK-SVEFPPISNSLMAAIKRSQAQQRRNPDNYHL 119
+ + S +LQF+ALELCLGV+ DR+P+S+ S + PP+SNSLMAAIKRSQA QRR P+N++L
Sbjct: 61 NSAYSSRLQFKALELCLGVSLDRVPTSQLSDDSPPVSNSLMAAIKRSQANQRRQPENFNL 120
Query: 120 QQ-----IHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQ 174
+ + S +KV+L+ +L+ILDDP+ SRVFGEAGF S +IKLAI++P
Sbjct: 121 YHQIQQQQQQSSSSISCIKVELQNLILSILDDPVVSRVFGEAGFRSSEIKLAIVRPLPQV 180
Query: 175 FPPRLSLTRCPPIFLYNLTD--------SFPGRAGL-KLPFG----------PDDVDENC 215
F S + PP+FL NL S PGR G+ PF ++ D NC
Sbjct: 181 FKFSSSRFKGPPLFLCNLLSSEDPDSLYSGPGRRGVFSFPFSGGLFLNNNSNNNNGDANC 240
Query: 216 RRIGEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEI 275
RRIGEVLA KG+NPLLVG+ A L F E V K + P ++ GL V+C+E ++
Sbjct: 241 RRIGEVLA---RNKGRNPLLVGLSAYHTLASFSEMVEKRKENVLPVELCGLSVICMESDV 297
Query: 276 NEFVGGR-VNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVST----EAARFV 330
N+F+ + + + L+F+E+ V + GPG++ N+G+LK VS+ +A +V
Sbjct: 298 NKFITSENFDKKCVDLRFEELGQFVEKSLGPGLLANFGDLKAFVSNDDHNNGMDDAVSYV 357
Query: 331 VSQLTSLLKSGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI---------HW 381
+ +LT LL+ G ++WLIGAA SYE Y K + +FP + DWDLQLLPI
Sbjct: 358 IEKLTKLLQLYGG-RVWLIGAA-SYENYSKFVGRFPSTEKDWDLQLLPITSLRTPSVAES 415
Query: 382 KSSLMGSFVPFGGFFSSPPDFKNPVRSKSHY 412
SLM SFVPFGGFFS+P D P+ Y
Sbjct: 416 YPSLMESFVPFGGFFSTPSDLNAPLNRSCKY 446
>gi|356547789|ref|XP_003542291.1| PREDICTED: uncharacterized protein LOC100785122 [Glycine max]
Length = 1036
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 319/1135 (28%), Positives = 507/1135 (44%), Gaps = 207/1135 (18%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR ++ +Q L+ E+A VL+ ++ A +R H QTT LHV + LL PS LR+AC +
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLASPSGFLRQACIKSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEF---PPISNSLMAAIKRSQAQQRRNPDNY 117
S P LQ RALELC VA +RLP+S++ PPISN+LMAA+KR+QA QRR Y
Sbjct: 61 PNSSHP-LQCRALELCFSVALERLPTSQNTSSSMEPPISNALMAALKRAQAHQRR---GY 116
Query: 118 HLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPP 177
QQ QQ +KV+L+ +++ILDDP SRV EA F S +K A I+ S+ P
Sbjct: 117 PEQQ----QQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK-ATIEQSLNAVPS 171
Query: 178 RLSLTRCPPIFLYNLTDSFPGRAGLKLPFGP------------DDVDENCRRIGEVLAGR 225
++ +S PGR L P + +RI ++L
Sbjct: 172 TVNSGLGFRPSAVAPVNSAPGR---NLYLNPRLQQQQQQGSTAQHRGDEVKRILDILL-- 226
Query: 226 DEKKGKNPLLVGVC-ANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVN 284
K +NP+LVG +A+K ++ + ++G V+ +E E+ +
Sbjct: 227 -RTKKRNPILVGESEPEAAIKEVIKKIENKELG--EGAFANAHVIHLEKELPS------D 277
Query: 285 VEMMMLKFKE----VESAVGRCSGPGVVVNYGELKVLVSDSVS---------------TE 325
+ + KE +E+ +G GV V+ G+LK LV V E
Sbjct: 278 KAQIPARLKELGDLIETRIGNSGCGGVFVDLGDLKWLVEQPVGFGIGGGLGNMQQLTLAE 337
Query: 326 AARFVVSQLTSLLK---SGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWK 382
A R V+++ L+ G +LWL+G A + ETYL+ P ++NDWDLQ +PI +
Sbjct: 338 AGRAAVAEMGRLVSKFGEGGAGRLWLLGTA-TCETYLRCQVYHPTMENDWDLQAVPITTR 396
Query: 383 SSLMGSFVPFG--GFFSSPPDFKNPVRSKS-----------------HYSTLCYLCTEKL 423
+SL G F G GF + + +P+++ S S C C +
Sbjct: 397 ASLPGIFPRLGTNGFLGTSLESLSPLKTLSTTTIPPLRRASENVDPAAVSICCPQCMQSC 456
Query: 424 EQEVAALLK-LESSDS--VTDQCLDNLTSSDRIAALDTSKGVGTAKAKDDVTALNAKIME 480
EQEVA +LK E SD+ ++ +L + A + G +A++ + + E
Sbjct: 457 EQEVAEMLKETEKSDTELKSEAAKPSLPQWLQNAKTNKDNGKVMDQAQNQEVNVKKRTQE 516
Query: 481 LQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEFVRLMANRKGSSSKYPSLCESQCTNPS 540
+Q+KW+D+C SLH PK + +V V + G
Sbjct: 517 IQKKWHDSCLSLH-----PKF---HQLNVSTERLVPTSLSMTG----------------- 551
Query: 541 PGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSNNDEHLLPPHPLADLY 600
+ + N+ + IPL N N + L ++S+ P
Sbjct: 552 ----LYNMNLLGRQFQPKIPL-----NKNLGTSLQLSSNPTP-----------------I 585
Query: 601 KPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKL-IDNKEQCFSGSISAEFDAVSEGT 659
P EH VTTDL LG+ P+ T K I++ C S +FD +
Sbjct: 586 HPSEHVVSPQQIPVTTDLVLGQTKPADATPEETHKEGINDFLSCLSSESQDKFDELQSKK 645
Query: 660 FHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDV 719
D +K L L EKV WQ +A ++ V++ ++GNG+
Sbjct: 646 L-----------------LDADSFKKLLKGLTEKVWWQQDAASAVATTVTQCKLGNGK-- 686
Query: 720 GSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQN 779
SK WL F+GPD++GKKK+A+AL+E+V G+ +I + QR + +S D +
Sbjct: 687 -RRSKGDTWLLFVGPDRIGKKKMAAALSELVSGSTNPII---IPLAQRRADGDS--DAPH 740
Query: 780 IDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYG 839
LRGK +D I + R P SV+ LED+D+ A+ +++ S+ +A+ G+F DS+G
Sbjct: 741 -------LRGKTALDRIAEAIRRNPLSVIVLEDIDE-ANILLRGSIRRAMEQGRFPDSHG 792
Query: 840 RDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGS 899
R++S+ ++F+ T+ L +P+ + L WQ++ ++
Sbjct: 793 REISLGNVMFILTANWLPEDFRCLSNGSPLDEEKLENLAKGGWQLRISVGKR-------- 844
Query: 900 GMNVKVTPRKENSNPESRRKRKRTDDGDSPINSQKQVDDSFRSYLDLNLPADEAEE---- 955
S+R+ D D + +K+V+ DLN AD+AE+
Sbjct: 845 ---------------ASKRRPSWLSDEDRSLKPRKEVNSGL--SFDLNEAADDAEDGRGD 887
Query: 956 ------DTSSEKFDSDTICENS-GAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKF 1008
D + E D++ S A + D D VF+PLNFDLL I +F
Sbjct: 888 GSLNSSDFTVEHEDNNHDVGGSLSAVPRELLDSVDDAIVFKPLNFDLLRRNFSSSIIKRF 947
Query: 1009 QRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYEVRRKHHFT 1063
G V +E+ E L +I + WL + I+ W++ ++ SF+++++ + T
Sbjct: 948 SAVVGNGVSIEVQGEALDKITSGVWLG--QTTIDEWMDKALVPSFHQLKKNLNST 1000
>gi|449530752|ref|XP_004172357.1| PREDICTED: uncharacterized LOC101204506, partial [Cucumis sativus]
Length = 307
Score = 342 bits (876), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 178/310 (57%), Positives = 220/310 (70%), Gaps = 8/310 (2%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V+ ARQCL+EE+AR LDDAV VAR+R H+QTTSLH VSALL +PSS LR+AC R +
Sbjct: 1 MPTPVSAARQCLTEEAARALDDAVSVARRRCHAQTTSLHAVSALLSLPSSALRDACSRAR 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEFPPISNSLMAAIKRSQAQQRRNPDNYHLQ 120
S + P+LQFRAL+L +GV+ DRLPSSK + PP+SNSLMAAIKRSQA QRR+P+++HL
Sbjct: 61 SCAYLPRLQFRALDLSVGVSLDRLPSSKPTDEPPVSNSLMAAIKRSQANQRRHPESFHLH 120
Query: 121 QIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRLS 180
QIH QQT S+LKV+LKYF+L+ILDD + SRVFGEAGF S DIKLAI+ P +T R
Sbjct: 121 QIHNQQQTPSILKVELKYFILSILDDAIVSRVFGEAGFRSCDIKLAIMHPPLTHHASRFP 180
Query: 181 LT-RCPPIFLYNLTDSFPGRAGLKLPF----GPDDVDENCRRIGEVLAGRDEKKGKNPLL 235
+ RCPPIFL NLTDS G PF G D D N RRIGE+L K G+NPLL
Sbjct: 181 RSARCPPIFLCNLTDSDLGHRNFPFPFSGGYGNGDDDANTRRIGEILV---RKTGRNPLL 237
Query: 236 VGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKFKEV 295
+GV A AL+ F + + K P +I GL V+C+E EI+EFV G + E M KF+E+
Sbjct: 238 IGVYAADALRSFTDCLQRCKTESLPAEISGLRVICIEKEISEFVSGNGSKETMRSKFEEI 297
Query: 296 ESAVGRCSGP 305
+ +CSGP
Sbjct: 298 FGMIQQCSGP 307
>gi|359484916|ref|XP_002266859.2| PREDICTED: chaperone protein ClpB-like [Vitis vinifera]
Length = 1060
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 318/1133 (28%), Positives = 496/1133 (43%), Gaps = 195/1133 (17%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR ++ +Q L+ E+A VL+ ++ A +R H QTT LHV + LL PS LR+AC R
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLGSPSGFLRQACIRSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVE---FPPISNSLMAAIKRSQAQQRRN-PDN 116
S P LQ RALELC VA +RLP+++++ PPISN+LMAA+KR+QA QRR P+
Sbjct: 61 PNSSHP-LQCRALELCFSVALERLPTAQNISPGLEPPISNALMAALKRAQAHQRRGCPE- 118
Query: 117 YHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQ------- 169
QQ QQ +KV+L+ +++ILDDP SRV EA F S +K I Q
Sbjct: 119 ---QQ----QQPLLAVKVELQQLIISILDDPSVSRVMREASFSSPAVKATIEQSMNSPPT 171
Query: 170 PSVTQFPPRLSLTRCPPIF-----------LY---NLTDSFPGRAGLKLPFGPDDVDENC 215
P+V+ P L R P LY L E
Sbjct: 172 PNVSPSPIGLGGFRGPGAPTSTPTPTPTRNLYLNPRLQQQGNAATAAAANQSGHQRAEEV 231
Query: 216 RRIGEVLAGRDEKKGKNPLLVGVCANSA-LKGFVESVNGGKVGLFPRQIYGLDVVCVEYE 274
+R+ ++L K +NP+LVG A +K + + G P + ++V+ + E
Sbjct: 232 KRVVDILL---RTKKRNPVLVGESEPEAVMKELLRRIEKRDFGDGP--LKNVEVISLHRE 286
Query: 275 INEFVGGRVNVEMMMLKFKEVESAV-GRCSGPGVVVNYGELKVLVSDSVS---------- 323
++ R + K KE+ V R G ++++ G+LK LV V+
Sbjct: 287 LSLNNSDRTQIPT---KLKELGRLVEARIGGGSIILDLGDLKWLVEQPVNLGVAGSGTVG 343
Query: 324 ----TEAARFVVSQLTSLLKS---GNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQL 376
+EA R V+++ LL + G+ +LWLIG A + ETYL+ P ++NDWDLQ
Sbjct: 344 QQVVSEAGRAAVAEMGKLLATFGEGSNGRLWLIGTA-TCETYLRCQVYHPSMENDWDLQA 402
Query: 377 LPIHWKSSLMGSFVPFG--GFFSSPPDFKNPVRS-----------------KSHYSTLCY 417
+PI ++ + G F FG G SS + P+++ + + C
Sbjct: 403 VPIAARTPVPGLFSRFGTNGILSSSVESLTPMKNFPTAITALPRRVSENMDPAQKMSCCP 462
Query: 418 LCTEKLEQEVAALLKLESSDSVTDQCLDNLTSS-----DRIAALDTS-KGVGTAKAKDDV 471
C E EQE+ L E S ++ + SS ALD K ++ KD
Sbjct: 463 QCMENYEQELGKLEGQEFEKSSSEVKSEVSRSSLPQWLKNAKALDGDVKTTDQSQTKDQE 522
Query: 472 TALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEFVRLMANRKGSSSKYPSL 531
K +L +KWNDTC LH P L+ + + LS A G + P L
Sbjct: 523 LIWKQKPQDLLKKWNDTCLHLHPNFHQPNLNSERITPTALSMTGLYNATLLGRQAFQPKL 582
Query: 532 CESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSNNDEHLL 591
++ N L +NS+ ++ +
Sbjct: 583 QPTR---------------------------------NLGETLQLNSNLVANQPCEQAVT 609
Query: 592 PPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKLIDNKEQCFSGSISAE 651
PP + V TDL LG+ + E T K+ + F IS+E
Sbjct: 610 PPG-----------------SPVRTDLVLGR---TKINETTTEKIHKEHVKDFFQCISSE 649
Query: 652 FDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRW 711
S FH + Q+ S P D K L LAEKV WQ +A T++ V++
Sbjct: 650 ----SLNKFHEL-QNDKLS------PLDADSVKKLLKGLAEKVSWQQDAARTVATTVTQC 698
Query: 712 RIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQP 771
++GNG+ + SK IWL F GPD++GKKK+A+AL+E+V G
Sbjct: 699 KMGNGKRRSAGSKGDIWLLFTGPDRIGKKKMAAALSELVCG------------------V 740
Query: 772 NSIFDC----QNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTK 827
N I C ++ D RGK VD I + R +SV+ LED+D+ AD +VQ S+ +
Sbjct: 741 NPIMICLGSRRDDGELDMNFRGKTAVDRIAEAVRRNHFSVIMLEDIDE-ADMLVQGSIKR 799
Query: 828 AISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIILGAKRWQMQTA 887
A+ G+ DS+GR+VS+ +IF+ T+ L +T + + + WQ++ +
Sbjct: 800 AMERGRLVDSHGREVSLGNVIFILTANWLVDNRKSLSNSTLLNEEKLASIAGGGWQLKLS 859
Query: 888 ISHGFADAARGSGM---NVKVTPRKENSNPESRRKRKRTDDGDSPINSQKQVDDSFRSYL 944
S A R + + + PRKEN + S + D D + + D +
Sbjct: 860 ASEKSA-KRRANWLHDEDRSTKPRKENGSALSFDLNQAADTEDDRADGSRNSSDLTIDHE 918
Query: 945 DLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREI 1004
D P + TS+ + + + D + F+P++F+ + ++ I
Sbjct: 919 DEQGPENRCLPPTSASR---------------ELLNSVDNVITFKPVDFNPIRHQVRSCI 963
Query: 1005 QPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYEVR 1057
KF G ++ ++++ E L +IL WL + +E W E V++ F++++
Sbjct: 964 ARKFSSVMGDKLSIQVEDEALEKILGGVWLG--RSGLEEWAEKVLVPGFHQLK 1014
>gi|42571145|ref|NP_973646.1| heat shock-related protein [Arabidopsis thaliana]
gi|330254692|gb|AEC09786.1| heat shock-related protein [Arabidopsis thaliana]
Length = 910
Score = 336 bits (861), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 184/419 (43%), Positives = 272/419 (64%), Gaps = 27/419 (6%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V +A+QCL+ E++ L++AV VAR+R HSQTTSLH +SALL +P+S+LR+AC RV+
Sbjct: 1 MPTAVNVAKQCLTAEASYALEEAVNVARRRGHSQTTSLHAISALLSLPTSVLRDACARVR 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSV---EFPPISNSLMAAIKRSQAQQRRNPDNY 117
+ + SP+LQF+AL+LCL V+ DR+ S + + PP+SNSLMAAIKRSQA QRR P+N+
Sbjct: 61 NSAYSPRLQFKALDLCLSVSLDRIQSGHQLGSDDSPPVSNSLMAAIKRSQAHQRRLPENF 120
Query: 118 HLQQIHC---NQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQ 174
+ Q NQ + S +KV+L+ +L+ILDDP+ SRVFGEAGF S ++KL+II+P
Sbjct: 121 RIYQEMSQSQNQNSLSCVKVELRQLILSILDDPVVSRVFGEAGFRSSELKLSIIRP---- 176
Query: 175 FPPRLSLTRCPPIFLYNLT---DSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEKKGK 231
P L + P+FL NLT + P R G +P + D + RRI V + KG+
Sbjct: 177 VPHLLRYSSQQPLFLCNLTGNPEPNPVRWGFTVPSLNFNGDLDYRRISAVFT---KDKGR 233
Query: 232 NPLLVGVCANSALKGFVESVNGGKVG--LFPRQIYGLDVVCVEYEINEFVGGRVNVEMMM 289
NPLLVGV A L ++ S+ + + P +++GL V + EI++ + + +
Sbjct: 234 NPLLVGVSAYGVLTSYLNSLEKNQTDGMILPTKLHGLTAVNIGSEISDQISVKFDKTYTD 293
Query: 290 LKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWLI 349
+F ++ + SGPG++++YG+L+V + + AA ++V++++ LL+ +G ++WLI
Sbjct: 294 TRFHDLGKLAEQGSGPGLLLHYGDLRVFTNGEGNVPAANYIVNRISELLRR-HGRRVWLI 352
Query: 350 GAAMSYETYLKMLAKFPGLDNDWDLQLLPI--------HWKSSLMGSFVPFGGFFSSPP 400
GA S E Y KM+ +FP ++ DWDLQLL I H KSSL+GSFVPFGGFFS+ P
Sbjct: 353 GATTSNEVYEKMMRRFPNVEKDWDLQLLTITSLKPCLPHNKSSLIGSFVPFGGFFSTTP 411
Score = 195 bits (496), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 214/410 (52%), Gaps = 58/410 (14%)
Query: 679 DPRD-----YKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLG 733
+PRD +K + L + V QDEA IS A+S+ S ++R +WL +G
Sbjct: 528 NPRDLNAESFKIIYRRLTDMVSGQDEAARVISCALSQ-------PPKSVTRRDVWLNLVG 580
Query: 734 PDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCD--CKLRGKV 791
PD VGK++++ LAEIV+ ++ + + VD+ + + Q + CD +LRGK
Sbjct: 581 PDTVGKRRMSLVLAEIVYQSEHRFMAVDLGAAE-----------QGMGGCDDPMRLRGKT 629
Query: 792 LVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVA 851
+VD+I++ P+ VVFLE+++KA D +Q SL+KAI TGKF DS+GR+V I IFV
Sbjct: 630 MVDHIFEVMCRNPFCVVFLENIEKA-DEKLQMSLSKAIETGKFMDSHGREVGIGNTIFVM 688
Query: 852 TSTILKGKHSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPR-KE 910
TS S T +SEE +L K Q++ I V P +
Sbjct: 689 TS-------SSQGSATTTSYSEEKLLRVKGRQVEIRIE------------TVSSLPMVRS 729
Query: 911 NSNPESRRKRKRTDDGD-----SPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSD 965
P S KRK G+ + S K+++ + LDLNLPA E E + EK+ +
Sbjct: 730 VYGPTSVNKRKLMGLGNLQETKDTVESVKRLNRTTNGVLDLNLPAQETEIE---EKYHCE 786
Query: 966 TICENSGAWLEDFFDQTDAIAV-FQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEI 1024
ENS WL + + I V F+P +F+ LAEKI + ++ F + + LLE+D +I
Sbjct: 787 ---ENSNVWLMNLKNHKRLIEVPFKPFDFEGLAEKIKKSVKENFDKCVRSDCLLEVDPKI 843
Query: 1025 LVQILAATWLSDRKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHE 1074
+ ++LAA + SD +K I+ +EN++ F ++ ++ T VVKLV +
Sbjct: 844 IERLLAAVYFSDSRKDIKELLENIMSPVFLRIKERYEITTSCVVKLVGRD 893
>gi|18405278|ref|NP_030558.1| heat shock-related protein [Arabidopsis thaliana]
gi|15450731|gb|AAK96637.1| At2g40130/T7M7.2 [Arabidopsis thaliana]
gi|20334718|gb|AAM16220.1| At2g40130/T7M7.2 [Arabidopsis thaliana]
gi|330254691|gb|AEC09785.1| heat shock-related protein [Arabidopsis thaliana]
Length = 491
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 184/419 (43%), Positives = 272/419 (64%), Gaps = 27/419 (6%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V +A+QCL+ E++ L++AV VAR+R HSQTTSLH +SALL +P+S+LR+AC RV+
Sbjct: 1 MPTAVNVAKQCLTAEASYALEEAVNVARRRGHSQTTSLHAISALLSLPTSVLRDACARVR 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSV---EFPPISNSLMAAIKRSQAQQRRNPDNY 117
+ + SP+LQF+AL+LCL V+ DR+ S + + PP+SNSLMAAIKRSQA QRR P+N+
Sbjct: 61 NSAYSPRLQFKALDLCLSVSLDRIQSGHQLGSDDSPPVSNSLMAAIKRSQAHQRRLPENF 120
Query: 118 HLQQIHC---NQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQ 174
+ Q NQ + S +KV+L+ +L+ILDDP+ SRVFGEAGF S ++KL+II+P
Sbjct: 121 RIYQEMSQSQNQNSLSCVKVELRQLILSILDDPVVSRVFGEAGFRSSELKLSIIRP---- 176
Query: 175 FPPRLSLTRCPPIFLYNLT---DSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEKKGK 231
P L + P+FL NLT + P R G +P + D + RRI V + KG+
Sbjct: 177 VPHLLRYSSQQPLFLCNLTGNPEPNPVRWGFTVPSLNFNGDLDYRRISAVFT---KDKGR 233
Query: 232 NPLLVGVCANSALKGFVESVNGGKVG--LFPRQIYGLDVVCVEYEINEFVGGRVNVEMMM 289
NPLLVGV A L ++ S+ + + P +++GL V + EI++ + + +
Sbjct: 234 NPLLVGVSAYGVLTSYLNSLEKNQTDGMILPTKLHGLTAVNIGSEISDQISVKFDKTYTD 293
Query: 290 LKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWLI 349
+F ++ + SGPG++++YG+L+V + + AA ++V++++ LL+ +G ++WLI
Sbjct: 294 TRFHDLGKLAEQGSGPGLLLHYGDLRVFTNGEGNVPAANYIVNRISELLRR-HGRRVWLI 352
Query: 350 GAAMSYETYLKMLAKFPGLDNDWDLQLLPI--------HWKSSLMGSFVPFGGFFSSPP 400
GA S E Y KM+ +FP ++ DWDLQLL I H KSSL+GSFVPFGGFFS+ P
Sbjct: 353 GATTSNEVYEKMMRRFPNVEKDWDLQLLTITSLKPCLPHNKSSLIGSFVPFGGFFSTTP 411
>gi|356569296|ref|XP_003552839.1| PREDICTED: uncharacterized protein LOC100786125 [Glycine max]
Length = 942
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 250/784 (31%), Positives = 386/784 (49%), Gaps = 85/784 (10%)
Query: 344 EKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI---------HWKSSLMGSFVPFGG 394
+KLWL+GAA SY+ YL + KFP ++ DWDLQLLPI + + SLM SFVPFGG
Sbjct: 205 DKLWLMGAAASYDNYLNFVGKFPSIEKDWDLQLLPITSVKPLSESYHRPSLMDSFVPFGG 264
Query: 395 FFSSPPDFKNPVRSKSHYSTLCYLCT-EKLEQEVAALLKLE-SSDSVTDQCLDNLTSSDR 452
FFSS D K P+ + C+ C E+ E EV A K S+ S D NL +
Sbjct: 265 FFSSQSDLKAPLSGSFYCVPHCHQCGGERCEHEVLASSKERFSASSAADPHQSNLPPWLQ 324
Query: 453 IAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVP------------- 499
IA ++KG+ + V +++ L + ++ Q LH+ +
Sbjct: 325 IAEFGSTKGLNVKTKDNGVLLDSSESGSLHKNFDKLSQHLHQRDAITFPTVVGFHCGAEK 384
Query: 500 -KLDIRQRSHVQLSEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNAT 558
K D S SE++ L + P+ SQ ++P P M Q +++
Sbjct: 385 KKEDTDNCSSKSPSEYINLNSRVPVGMQMMPT---SQSSSPFPAVFMAKQEKYNSKLAEM 441
Query: 559 IPLSSEANNVNFQSRLPINSSTKPQSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDL 618
+ + + +S NSS S S + + SVTTDL
Sbjct: 442 FQKVEDHESGDQRSCNMSNSSVCDGS--------------------QMSPTSVTSVTTDL 481
Query: 619 GLGKIYPSTRQEANTPKLIDNKE--QCFSGSISAEFDAVSEGTF--HNVVQSSSCSAPHT 674
GLG T + P + E + S F+ +++G H+ SS S +
Sbjct: 482 GLGIYSSPTSNKLKKPAVQYTMEPPKEIPSRFSQNFN-LADGNILKHSSQSSSCLSFDYC 540
Query: 675 GEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGP 734
G+ D ++ K L L+++V WQDEA+ I + + + G N IW+ F+G
Sbjct: 541 GQ-VDAKNPKILFEVLSKEVTWQDEALRAIIKTIVCSPTKRVKHRGPNQPGDIWMNFVGS 599
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD 794
D++GKKKIA +LAE+++G++ I VD+SSE+ + CD K RGK +D
Sbjct: 600 DRLGKKKIAVSLAELLYGSRESFIFVDLSSEE-------------MKGCDVKFRGKTALD 646
Query: 795 YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
+I E KP SVVFLE+++KA D + Q+SL+ AI TGK +DS+GR+VS++ +FV + +
Sbjct: 647 FIVGECCKKPLSVVFLENVEKA-DILAQNSLSLAIKTGKISDSHGREVSVNNTMFVFSFS 705
Query: 855 ILKGKHSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNP 914
++S+ P+ P +SEE IL AK ++ + H D S + VT ++ P
Sbjct: 706 --DYQNSLMPRGEPSNYSEERILRAKGGGIKIKVEHVIGDIRSQS---ISVTNNSIHAVP 760
Query: 915 ESRRKRKRTDDGDSPINSQKQVDDSFRS-------YLDLNLPADEAEEDTSSEKFDSDTI 967
KR GD + + D+ + LDLNLPA+E E+ +++
Sbjct: 761 NLNILNKRKLIGDDKFHDLHFLSDTAKRAHTTSNWLLDLNLPAEENEQKQTNDGNSDHVS 820
Query: 968 CENSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQ 1027
EN WL+D D D VF+P +F+ LA+++L+ I+ F + G E L+I E++ Q
Sbjct: 821 TENQNLWLQDLCDLVDETVVFKPYDFEALADRVLKVIRSNFNKILGSECALQIQTEVMDQ 880
Query: 1028 ILAATWLSDRKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIRL 1087
LAA ++SDR + +ENW+E V+ F EV+R+++ TA S+VKL E+A+G+ L
Sbjct: 881 FLAAQYVSDRDREVENWVEEVLCEGFTEVQRRYNLTASSIVKL-----FTCPEQAAGVHL 935
Query: 1088 PKII 1091
P I
Sbjct: 936 PPRI 939
Score = 209 bits (531), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 149/213 (69%), Gaps = 23/213 (10%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V ARQCL+ ++AR LD+AV VAR+R H+QTTSLH VSALL +P LLR+AC R +
Sbjct: 1 MPTPVAAARQCLTPDAARALDEAVSVARRRGHAQTTSLHAVSALLSLP--LLRDACSRAR 58
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSK----SVEFPPISNSLMAAIKRSQAQQRRNPDN 116
+ + SP+LQF+AL+LCL V+ DR PSS S PPISNSLMAAIKRSQA QRR+PDN
Sbjct: 59 NCAYSPRLQFKALDLCLSVSLDRAPSSHNHASSDHDPPISNSLMAAIKRSQANQRRHPDN 118
Query: 117 YHLQQIHCNQQ---TASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVT 173
+H H QQ + S +KV+L++ +L+ILDDP+ SRVF EAGF S DIKLAI++P
Sbjct: 119 FHFYPHHQTQQQPFSVSSVKVELQHLILSILDDPVVSRVFAEAGFRSSDIKLAILRP--- 175
Query: 174 QFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPF 206
P R PPIFL NL++ P R + PF
Sbjct: 176 -LRP-----RGPPIFLCNLSE--PPR---RFPF 197
>gi|357479855|ref|XP_003610213.1| Chaperone protein clpB [Medicago truncatula]
gi|355511268|gb|AES92410.1| Chaperone protein clpB [Medicago truncatula]
Length = 1025
Score = 326 bits (835), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 333/1171 (28%), Positives = 524/1171 (44%), Gaps = 253/1171 (21%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR ++ +Q L+ E+A VL+ ++ A +R H QTT LHV + LL PS LR+AC +
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLP-----SSKSVEFPPISNSLMAAIKRSQAQQRRNPD 115
S P LQ RALELC VA +RLP SS S PPISN+LMAA+KR+QA QRR
Sbjct: 61 PNSSHP-LQCRALELCFSVALERLPTSQNASSTSAMEPPISNALMAALKRAQAHQRR--- 116
Query: 116 NYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQF 175
Y QQ QQ +KV+L+ +++ILDDP SRV EA F S +K A I+ S+
Sbjct: 117 GYPEQQ----QQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK-ATIEQSLNSV 171
Query: 176 PPRLSLTRCPPIFLYNLTDSFPGRA---------------GLKLPFGPDDVDENCRRIGE 220
P P+ + PG A G G DE +R+ E
Sbjct: 172 APSPVTVNSNPMMGFRPGMVTPGAAPTRNLYMNPRLQQQGGAAALSGAHKGDE-VKRVVE 230
Query: 221 VLAGRDEKKGKNPLLVGVC-ANSALKGFVESVNGGKV--GLFPRQIYGLDVVCVEYEINE 277
+L K +NP+LVG +A++ ++ + ++ G+F + +E E+
Sbjct: 231 ILM---RTKKRNPVLVGESEPEAAIREVLKKIENKELGEGVF----SNAHAIYLEKELPS 283
Query: 278 FVGGRVNVEMMMLKFKE----VESAVGRC-SGPGVVVNYGELKVLVSDSVS--------- 323
G + ++ KE +ES +G S GV +N G+LK LV V
Sbjct: 284 DRG------QIPVRIKELGDLIESRLGNSGSCGGVFINLGDLKWLVEQPVGFGLGNMQQP 337
Query: 324 --TEAARFVVSQLTSLL-KSGNG--EKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLP 378
EA R V+++ L+ K G G KLWL+G A + ETYL+ P ++NDWDLQ +P
Sbjct: 338 ALAEAGRAAVAEMGRLVAKFGEGGVGKLWLLGTA-TCETYLRCQVYHPSMENDWDLQAVP 396
Query: 379 IHWKSSLMGSFVPFG--GFFSSPPDFKNPVRS-------------------KSHYSTLCY 417
I +S L G F G G + + +P+++ + T C
Sbjct: 397 ITTRSPLPGMFPRLGTNGILGTTLESLSPLKTLTPTPITPLTRASENVDPAAAAAPTCCP 456
Query: 418 LCTEKLEQEVAALLK-LESSDSVTD---------QCLDNLTSSDRIAALDTSKGVGTAKA 467
C EQE+A +LK E SDS Q L N +++ D +K + A++
Sbjct: 457 QCMRSCEQEIADMLKETEKSDSELKPDATRPPLPQWLQNARTNN-----DNAKVMDQAQS 511
Query: 468 KDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEFVRLMANRKGSSSK 527
+ + E+Q+KW+D+C +LH PK H Q R++ ++
Sbjct: 512 NGQEGNVKKRTQEIQKKWHDSCLNLH-----PKF------HQQNVSTERIVPTPFSMTNL 560
Query: 528 YPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSNND 587
Y + P + +N+ + Q ++IP +PI S
Sbjct: 561 YNVNLLGRQFQPKVQPN---KNLGCSLQLSSIP-------------IPIQQS-------- 596
Query: 588 EHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTR--QEANTPKLIDNKEQCFS 645
EH P ++VTT+L LG+ PS +E++ ++ D F
Sbjct: 597 EHTASPRK----------------STVTTELVLGQTKPSDTIPEESHRERIND-----FL 635
Query: 646 GSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTIS 705
S+S+E S+ F + H+ + FD +K L L EKV WQ +A I+
Sbjct: 636 SSLSSE----SQDKFDEL---------HSKKLFDTDSFKRLLKTLTEKVWWQQDAASAIA 682
Query: 706 QAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSE 765
AV++ + LGPD++GKK++A+AL+E+V G+ +I S
Sbjct: 683 TAVTQCK-------------------LGPDRIGKKRMAAALSELVSGSNPIVI----SLA 719
Query: 766 QRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSL 825
QR + D + RGK ++D I + R P+SV+ LED+D+ A+ +++ ++
Sbjct: 720 QRRG---------DGDSNAHQFRGKTVLDRIVETIRRNPHSVIMLEDIDE-ANTLLRGNI 769
Query: 826 TKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIILGAKRWQMQ 885
+A+ G+F DS+GR++S+ ++F+ TS L S P+ + L + WQ++
Sbjct: 770 KRAMEQGRFPDSHGREISLGNVMFILTSNWLPEDLSYLSNGAPLDDEKLENLASGGWQLR 829
Query: 886 TAISHGFADAARGSGMNVKVTPRKEN--SNPE-SRRKRKRTDDGDSPINSQKQVDDSFRS 942
+++ KV+ R+ + SN E S + RK + G S
Sbjct: 830 LSVTK-------------KVSKRRPSWLSNEERSLKPRKELNLGLS-------------- 862
Query: 943 YLDLNLPADEAEEDTSSEKFDSDTICEN--------SGAWLEDFFDQTDAIAVFQPLNFD 994
DLN AD E+ SD ++ S + + D D VF+PLNFD
Sbjct: 863 -FDLNEAADVEEDRADGSHNSSDFTVDHEENNHNGGSPSKPRELLDSVDDAIVFKPLNFD 921
Query: 995 LLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRSFY 1054
L+ + I +F G + +E+ E L +I + WL + I+ W+E V++ SF+
Sbjct: 922 LIRQNFSASIAKRFSAVVGNGISIEVQEEALDKITSGVWLG--QTTIDEWMEKVLVPSFH 979
Query: 1055 EVRRKHHFTAGSVVKLVAHE-GLLVEEEASG 1084
++ + ++ + L HE LLV E G
Sbjct: 980 QLNKSYNSS-----NLDEHESSLLVRLEDDG 1005
>gi|297823931|ref|XP_002879848.1| hypothetical protein ARALYDRAFT_483058 [Arabidopsis lyrata subsp.
lyrata]
gi|297325687|gb|EFH56107.1| hypothetical protein ARALYDRAFT_483058 [Arabidopsis lyrata subsp.
lyrata]
Length = 908
Score = 324 bits (831), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/425 (44%), Positives = 275/425 (64%), Gaps = 28/425 (6%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
M T V +A+QCL+ E+A L++AV VAR+R HSQTTSLH +SALL +P+S+LR+AC RV+
Sbjct: 1 MPTAVNVAKQCLTAEAAYALEEAVNVARRRGHSQTTSLHAISALLSLPTSVLRDACARVR 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSV---EFPPISNSLMAAIKRSQAQQRRNPDNY 117
+ + SP+LQF+AL+LCL V+ DR+ S + + + PP+SNSLMAAIKRSQA QRR P+N+
Sbjct: 61 NSAYSPRLQFKALDLCLSVSLDRIQSGQQLGSDDSPPVSNSLMAAIKRSQAHQRRLPENF 120
Query: 118 HLQQ---IHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQ 174
+ Q N + S +KV+L+ +L+ILDDP+ SRVFGEAGF S ++KL+II+P
Sbjct: 121 RIYQEMSQSQNSNSLSCVKVELRQLILSILDDPVVSRVFGEAGFRSSELKLSIIRP---- 176
Query: 175 FPPRLSLTRCPPIFLYNLT---DSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEKKGK 231
P L + P+FL N+T + P R G +P + D + RRI V +KG+
Sbjct: 177 VPHLLRYSSQQPLFLCNVTGNPEPNPVRWGFTVPNRNFNGDSDYRRISAVFM---REKGR 233
Query: 232 NPLLVGVCANSALKGFVESVNGGKVG--LFPRQIYGLDVVCVEYEINEFVGGRVNVEMMM 289
NPLLVGV A L G++ S+ + + P +++GL V + EI++ + + +
Sbjct: 234 NPLLVGVSAYGVLTGYLNSLEKNRTDGMILPTKLHGLTAVDIGSEISDQIIVKFDKTYTD 293
Query: 290 LKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWLI 349
+F ++ + SGPG+++NYG+L+V + AA ++V++++ LL+ +G ++WLI
Sbjct: 294 TRFHDLGKLAEQGSGPGLILNYGDLRVFTDGEGNVPAANYIVNRVSELLRR-HGRRVWLI 352
Query: 350 GAAMSYETYLKMLAKFPGLDNDWDLQLLPI--------HWKSSLMGSFVPFGGFFSSPP- 400
GA S + Y KML KFP ++ DWDLQLL I H KSSL+GSFVPFGGFFS+ P
Sbjct: 353 GATTSNDVYEKMLRKFPNVEKDWDLQLLTITSLKPCLPHHKSSLIGSFVPFGGFFSTTPS 412
Query: 401 DFKNP 405
D K P
Sbjct: 413 DLKLP 417
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/413 (32%), Positives = 218/413 (52%), Gaps = 63/413 (15%)
Query: 679 DPRD-----YKTLRIALAEKVGWQDEAICTISQAVSRW-RIGNGRDVGSNSKRGIWLAFL 732
+PRD +K + L ++V QDEA IS A+S+ +I RDV WL +
Sbjct: 525 NPRDLSAESFKIIYRRLTDRVSGQDEAARVISCALSQPPKIVTRRDV--------WLNLV 576
Query: 733 GPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCD--CKLRGK 790
GPD VGK++++ LAEIV+ ++ + + VD+ + + +D CD +LRGK
Sbjct: 577 GPDTVGKRRMSLVLAEIVYQSEHRYMAVDLGAAE-----------HGMDGCDDAMRLRGK 625
Query: 791 VLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+VD+I++ P+ VVFLE+++KA D +Q SL+KAI TGKF DS+GR+V I +FV
Sbjct: 626 TMVDHIFEVMCRNPFCVVFLENIEKA-DEKLQISLSKAIETGKFMDSHGREVGIGNTMFV 684
Query: 851 ATSTILKGKHSVHPQTTPVK--FSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPR 908
TS+ P+ + ++ +SEE +L AK Q++ I V P
Sbjct: 685 MTSS--------SPEDSGIRTSYSEEKLLRAKGRQVEIWIE------------TVPSLPM 724
Query: 909 -KENSNPESRRKRK-----RTDDGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKF 962
+ P S KRK + + + + K+ + + LDLNLPA E E +
Sbjct: 725 VRSVYGPTSVNKRKLMGLGKLQETKDTVETVKRWNRTTNGVLDLNLPAQETEIE------ 778
Query: 963 DSDTICENSGAWLEDFFDQTDAIAV-FQPLNFDLLAEKILREIQPKFQRAFGFEVLLEID 1021
+ D ENS WL + + I V F+P +F+ LAEKI + ++ F + + LLE+D
Sbjct: 779 EKDHCEENSNVWLMNLKNHERLIEVPFKPFDFEGLAEKIKKSVKEIFDKCVRSDCLLEVD 838
Query: 1022 YEILVQILAATWLSDRKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHE 1074
+I+ ++LAA + SD +K I+ +E ++ R F +++ ++ T VVKLV +
Sbjct: 839 PKIIERLLAAVYFSDSRKDIKELMEKIMSRVFLKIKERYEITTSCVVKLVGRD 891
>gi|356562493|ref|XP_003549505.1| PREDICTED: uncharacterized protein LOC100809965 [Glycine max]
Length = 1034
Score = 323 bits (828), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 313/1134 (27%), Positives = 495/1134 (43%), Gaps = 217/1134 (19%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR ++ +Q L+ E+A VL+ ++ A +R H QTT LHV + LL PS LR+AC +
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLASPSGFLRQACIKSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSK---SVEFPPISNSLMAAIKRSQAQQRRNPDNY 117
S P LQ RALELC VA +RLP+S+ S PPISN+LMAA+KR+QA QRR Y
Sbjct: 61 PNSSHP-LQCRALELCFSVALERLPTSQNTGSSMEPPISNALMAALKRAQAHQRR---GY 116
Query: 118 HLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPP 177
QQ QQ +KV+L+ +++ILDDP SRV EA F S +K A I+ S+ P
Sbjct: 117 PEQQ----QQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK-ATIEQSLNAVPA 171
Query: 178 RLSLTRCPPIFLYNLTDSFPGRAGLKLPFGP---------DDVDENCRRIGEVLAGRDEK 228
++ +S PGR L P + +RI ++L
Sbjct: 172 TVNSGLGFRPSAVAPVNSAPGR---NLYLNPRLQQQGSAAQHRGDEVKRILDIL---HRT 225
Query: 229 KGKNPLLVGVC-ANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEM 287
K +NP+LVG +A+K ++ + ++G G V + E + +
Sbjct: 226 KKRNPILVGESEPEAAIKEVIKKIENKELGE-----GGFANAHVIHLEKELPSDKAQIPA 280
Query: 288 MMLKFKE-VESAVGRCSGPGVVVNYGELKVLVSDSVS---------------TEAARFVV 331
+ + + +ES +G GV V+ G+LK LV V EA R V
Sbjct: 281 RLQELGDLIESRIGNSGCGGVFVDLGDLKWLVEQPVGFGVGGGLGNMQQLTLAEAGRAAV 340
Query: 332 SQ---LTSLLKSGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGS 388
++ L S G +LWL+G A + ETYL+ P ++NDWDLQ +PI ++ L G
Sbjct: 341 AEIGRLVSKFGEGGAGRLWLLGTA-TCETYLRCQVYHPTMENDWDLQAVPITSRAPLPGI 399
Query: 389 FVPFG--GFFSSPPDFKNPVRS-----------------KSHYSTLCYLCTEKLEQEVAA 429
F G G + + P+++ S S C C + EQEVA
Sbjct: 400 FPRLGTNGILGTSLESLLPLKTLSTTTIPSLRRASENIDPSAVSICCPQCMQSCEQEVAE 459
Query: 430 L----------LKLESSDSVTDQCLDNL-TSSDRIAALDTSKGVGTAKAKDDVTALNAKI 478
+ LK E++ Q L N T++D +D +A++ + +
Sbjct: 460 MLEETKKSDTELKSEAAKPSLPQWLQNAKTNNDNGKVMD--------QAQNQEVNVKKRT 511
Query: 479 MELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEFVRLMANRKGSSSKYPSLCESQCTN 538
E+Q+KW+D+C SLH PK F +L + E+
Sbjct: 512 KEIQKKWHDSCLSLH-----PK-------------FHQLNVS-----------TETLVPT 542
Query: 539 PSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSNNDEHLLPPHPLAD 598
P + + N+ + I N N + L ++S+ P
Sbjct: 543 PLSMTGLYNMNLLGRQFQPKI-----LRNKNLGTSLQLSSNPTP---------------- 581
Query: 599 LYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKL-IDNKEQCFSGSISAEFDAVSE 657
P EH VTTDL LG+ P+ T K I++ C S +FD +
Sbjct: 582 -IHPPEHAVSPKQMPVTTDLVLGQTKPADAVPEETHKEGINDFLSCLSSESQDKFDELQS 640
Query: 658 GTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGR 717
D +K L L EKV WQ +A ++ V++ ++GNG+
Sbjct: 641 KKL-----------------IDADSFKKLLKGLTEKVWWQQDAASAVASTVTQCKLGNGK 683
Query: 718 DVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC 777
SK WL F+GPD++GKKK+A+AL+E+ G+ +I + QR D
Sbjct: 684 ---RRSKGDTWLLFVGPDRIGKKKMAAALSELASGSNPIIIPL----AQRRG------DA 730
Query: 778 QNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDS 837
+ D LRGK +D I + R P SV+ LED+D+ A+ +++ S+ +A+ G+F DS
Sbjct: 731 GDSDA--PHLRGKTALDRIAEAIRRNPLSVIVLEDIDE-ANILLRGSIRRAMEQGRFPDS 787
Query: 838 YGRDVSISGMIFVATSTILKGKHSVHPQTTPVKF---SEEIILGAKRWQMQTAISHGFAD 894
+GR++S+ ++F+ T+ L P F S E +L ++ +
Sbjct: 788 HGREISLGNVMFILTANWL-----------PEDFRCLSNESLLDEEK----------LEN 826
Query: 895 AARGSGMNVKVTPRKENSNPESRRKRKRTDDGDSPINSQKQVDDSFRSYLDLNLPADEAE 954
A+G G ++++ K S+R+ D D + +K+V+ L+ +
Sbjct: 827 LAKG-GWQLRISAGKR----ASKRRPSWLSDEDRSLKPRKEVNSGVSFDLNEAAADAAED 881
Query: 955 EDTSSEKFDSDTICENSGAWLE----------DFFDQTDAIAVFQPLNFDLLAEKILREI 1004
+ SD E+ + + + D D VF+PLNFDLL I
Sbjct: 882 DRGDGSLNSSDFTVEHEDNYHDVGGSLSAVPRELLDSVDDAIVFKPLNFDLLRRNFSSSI 941
Query: 1005 QPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYEVRR 1058
+F G V +E+ E L +I + WL + I+ W++ V++ F+++++
Sbjct: 942 AKRFSSVVGNGVSIEVQGEALDKITSGVWLG--QTTIDEWMDKVLVPCFHQLKK 993
>gi|224112493|ref|XP_002316209.1| predicted protein [Populus trichocarpa]
gi|222865249|gb|EEF02380.1| predicted protein [Populus trichocarpa]
Length = 628
Score = 316 bits (809), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 229/635 (36%), Positives = 339/635 (53%), Gaps = 28/635 (4%)
Query: 474 LNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEFVRLMANRKGSSSKYPSLCE 533
L+ ++ LQRKW+ CQ LH TQ P + ++ F +L+ + K + S
Sbjct: 3 LSTRVAGLQRKWDSICQRLHHTQ-PPGSNTHPPQFPAVTGF-QLVEDEKEDAENLSSKDT 60
Query: 534 S------QCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSNND 587
S +C N + Q S + ++P+ SEA + + S+ +K + +
Sbjct: 61 SALPNGNRCVNVNSYIPSDLQKKSRKQLGFSLPVVSEARSDSILSK-QWEKPSKEEDHGS 119
Query: 588 EHLLPPHPLAD-LYKPHEHTSFSFLASVTTDLGL--GKIYPSTRQEANTPKLIDNKEQCF 644
L P+ ++ S + + SV TDLGL I ++ N + Q
Sbjct: 120 SGLRSPYSFSNSCTVDGSQASPTSVTSVVTDLGLRISSIGTELKKTVNQNHM--ELPQDL 177
Query: 645 SGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTI 704
SGS SA D V G + +SSS S+P G FDP + K L A+ E+VGWQDEAI I
Sbjct: 178 SGSFSANIDLVHGGISDHQARSSSSSSPVFGGQFDPSNAKMLFRAVVERVGWQDEAIRII 237
Query: 705 SQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSS 764
SQ ++ R N + G++ + IW +F GPD+ GKKKIASALAE+++G++ I D+SS
Sbjct: 238 SQTIAHCRAINEKRQGASLRGDIWFSFCGPDRCGKKKIASALAEVIYGSRENFISADLSS 297
Query: 765 EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSS 824
+ + + +FD + K RGK +VD++ E KP S+VFLE++DKA D Q S
Sbjct: 298 QDGMV-AHMVFDRPEMSGYTVKFRGKTMVDFVAGELCKKPLSIVFLENIDKA-DVQAQKS 355
Query: 825 LTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIILGAKRWQM 884
L++AI TGKF DS+GR+V IS IFV TST+ + K +SEE IL AK W M
Sbjct: 356 LSQAIQTGKFADSHGREVGISNAIFVTTSTLTEDKVGSSSNDFST-YSEERILKAKDWPM 414
Query: 885 QTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDDGDSPINSQKQVDDSFRSY- 943
+ I D G + +T +K+ + KRK + ++ Q+ + R++
Sbjct: 415 KILIER-VLDEEMGQVI-TPITAKKDIPSSIFLNKRKLVG-ANQNLDRQEITEMVKRAHK 471
Query: 944 -----LDLNLPADEAE-EDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNFDLLA 997
LDLNLPA E + DT D+D + S AWL+ F +Q DA F+P +FD LA
Sbjct: 472 MSARNLDLNLPAGENDLPDTDDGNSDNDPESDISKAWLQGFLEQVDARVFFKPFDFDALA 531
Query: 998 EKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYEVR 1057
E+IL E+ F + G+E LL+ID +++ Q+LAAT+LSD+ + +E+W+E V+ F EV
Sbjct: 532 ERILNEVNGCFHKIVGWECLLDIDPKVMEQLLAATYLSDQNRVVEDWVEQVLGWGFVEVL 591
Query: 1058 RKHHFTAGSVVKLVAHEGLLVEEEASGIRLP-KII 1091
R+H A S+VKLVA + L +E G+ LP KII
Sbjct: 592 RRHSLNANSIVKLVACKSLFLEGRMPGVYLPTKII 626
>gi|449465230|ref|XP_004150331.1| PREDICTED: uncharacterized protein LOC101218254 [Cucumis sativus]
Length = 1055
Score = 310 bits (794), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 311/1116 (27%), Positives = 510/1116 (45%), Gaps = 159/1116 (14%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR ++ +Q L+ E+A VL+ ++ A +R H QTT LHV + LL P+ LR+AC +
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLSSPTGFLRQACIKSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVE---FPPISNSLMAAIKRSQAQQRRN-PDN 116
S P LQ RALELC VA +RLP++++ PPISN+LMAA+KR+QA QRR P+
Sbjct: 61 PNSSHP-LQCRALELCFSVALERLPTAQNASPGAEPPISNALMAALKRAQAHQRRGCPEQ 119
Query: 117 YHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQ----PSV 172
QQ +KV+L+ +++ILDDP SRV EA F S +K I Q P+
Sbjct: 120 --------QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSMNSPAP 171
Query: 173 TQFPPRLSL-----TRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDE 227
P L PP LY L + + P E R++ ++L
Sbjct: 172 ASSSPIGGLGFRPSPVGPPRNLY-LNPRLQQQGSVAPPV--QQRGEEVRKVFDILL---R 225
Query: 228 KKGKNPLLVGVCANSAL-KGFVESVNGGKVG---LFPRQIYGLDV-VCVEYEINEFVGGR 282
K +NP+LVG A+ K + + ++G L Q+ D +C + +GGR
Sbjct: 226 SKKRNPVLVGESEPEAVVKELLRRIENRELGDGTLGNVQVIHFDKEICSSDRLQ--IGGR 283
Query: 283 VNVEMMMLKFKEVESAVGRCSGPG-VVVNYGELKVLV---------------SDSVSTEA 326
+ E+ L VES + + +G G ++++ G+LK LV V +E
Sbjct: 284 LK-ELGDL----VESRMEKLNGSGGIILDMGDLKWLVHQPPATGGGSGSGTVQQQVVSEG 338
Query: 327 ARFVVSQLTSLLK---SGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKS 383
R V ++ LL +G G +LWLIG A + ETYL+ ++NDWDLQ +PI ++
Sbjct: 339 GRAAVMEMGKLLAKYGNGGGSRLWLIGTA-TCETYLRCQVYHASMENDWDLQAVPIAARA 397
Query: 384 SLMGSFVPFG--GFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESS--DSV 439
L G F G G +SP + + ++ + T+ + L E L+SS S
Sbjct: 398 PLPGLFPRLGTTGILNSPVESLSSIKG---FPTISTIPMRPLMHE-----NLDSSRKSSC 449
Query: 440 TDQCLDNLTSS-DRIAALDTSKGVGTAKAKD-DVTAL-----NAKIMELQRKWNDTCQSL 492
QC+ N ++ A + K K + +AL NAK + K ++T +L
Sbjct: 450 CSQCMQNYERELEKFVANELDKPSSVTKPEGAKASALPPWLQNAKAQDEDAKKHETTDNL 509
Query: 493 HRTQLVPKLDIRQRSHVQLSEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISS 552
+ LM RK + + + C P H L++
Sbjct: 510 DK---------------------ELM--RKQKAQELQKKWQDTCLRLHPNFHNLNKFGLE 546
Query: 553 AEQNATIPLSSEANNVNFQSRLPINSSTKPQSNNDEHL-LPPHPLADLYKPHEHTSFSFL 611
++PL+ + N P + E L L +PL KP E + S L
Sbjct: 547 RTAPVSLPLTG-LYSPNLLGHQPSQPKLQLNKGFGETLQLKTNPLL-ASKPSEKVA-SIL 603
Query: 612 ---ASVTTDLGLGKIYPSTRQEANTPKLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSS 668
+ V T+L LG+ N +++ E+ + +S G + V + S
Sbjct: 604 RPGSPVRTELALGR--------KNDSEIL--AEETHKERVKDLLGCISSGPENKVCELRS 653
Query: 669 CSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW 728
T D YK L + EKV WQ EA ++ +V+++++GNG+ G+ K +W
Sbjct: 654 SKFIETS---DIDSYKRLLKGILEKVWWQQEAASALATSVTQFKLGNGKRRGTVPKGDMW 710
Query: 729 LAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLR 788
L FLGPD+VGKKK+A+ALAE+V G+ I + + S+++ + I +R
Sbjct: 711 LLFLGPDRVGKKKMATALAELVSGSNP--ITICLGSKRKSDGESEI-----------SIR 757
Query: 789 GKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
G+ ++D I + R +SV+ L+D D+ +D +V+ S+ +A+ G+FTDS+GR++S+ +I
Sbjct: 758 GRTVLDRISEAIRRNRFSVIVLDDFDE-SDLLVRGSIRRAMERGRFTDSHGREISLGNII 816
Query: 849 FVATSTILKG--KHSVHPQTTPVKFSEEIILGAKR--WQMQTAISHGFADAARGSGMNVK 904
F+ T+T + KH + EE G R WQ++ ++S
Sbjct: 817 FILTATWIPDDMKHLSNGNM----LEEEKFAGLARRTWQLKLSVSEQ------------T 860
Query: 905 VTPRKENSNPESRRKRKRTDDGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEK-FD 963
V R E + E R + R + G + + D+ D +L + + D +E +
Sbjct: 861 VKRRAEWAQGEERCLKPRLESGSAIAFDLNECADAEDEKTDGSLNSSDVTTDHETEHGLN 920
Query: 964 SDTICENSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYE 1023
+ + + + + + D VF+P++F + I I+ KF G ++ LE+
Sbjct: 921 TRQLSFTTASASREMLNTVDDAIVFKPVDFSPIKHSITSSIKKKFSSIVGEKMSLELQEN 980
Query: 1024 ILVQILAATWLSDRKKAIENWIENVVLRSFYEVRRK 1059
+ +I + WL + +E W EN ++ S E++ +
Sbjct: 981 AVEKITSGVWLGNTN--VEEWTENFLVPSLKELKAR 1014
>gi|449506714|ref|XP_004162827.1| PREDICTED: uncharacterized LOC101218254 [Cucumis sativus]
Length = 1055
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 311/1116 (27%), Positives = 510/1116 (45%), Gaps = 159/1116 (14%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR ++ +Q L+ E+A VL+ ++ A +R H QTT LHV + LL P+ LR+AC +
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLSSPTGFLRQACIKSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVE---FPPISNSLMAAIKRSQAQQRRN-PDN 116
S P LQ RALELC VA +RLP++++ PPISN+LMAA+KR+QA QRR P+
Sbjct: 61 PNSSHP-LQCRALELCFSVALERLPTAQNASPGAEPPISNALMAALKRAQAHQRRGCPEQ 119
Query: 117 YHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQ----PSV 172
QQ +KV+L+ +++ILDDP SRV EA F S +K I Q P+
Sbjct: 120 --------QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSMNSPAP 171
Query: 173 TQFPPRLSL-----TRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDE 227
P L PP LY L + + P E R++ ++L
Sbjct: 172 ASSSPIGGLGFRPSPVGPPRNLY-LNPRLQQQGSVAPPV--QQRGEEVRKVFDILL---R 225
Query: 228 KKGKNPLLVGVCANSAL-KGFVESVNGGKVG---LFPRQIYGLDV-VCVEYEINEFVGGR 282
K +NP+LVG A+ K + + ++G L Q+ D +C + +GGR
Sbjct: 226 SKKRNPVLVGESEPEAVVKELLRRIENRELGDGTLGNVQVIHFDKEICSSDRLQ--IGGR 283
Query: 283 VNVEMMMLKFKEVESAVGRCSGPG-VVVNYGELKVLV---------------SDSVSTEA 326
+ E+ L VES + + +G G ++++ G+LK LV V +E
Sbjct: 284 LK-ELGDL----VESRMEKLNGSGGIILDMGDLKWLVHQPPATGGGSGSGTVQQQVVSEG 338
Query: 327 ARFVVSQLTSLLK---SGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKS 383
R V ++ LL +G G +LWLIG A + ETYL+ ++NDWDLQ +PI ++
Sbjct: 339 GRAAVMEMGKLLAKYGNGGGSRLWLIGTA-TCETYLRCQVYHASMENDWDLQAVPIAARA 397
Query: 384 SLMGSFVPFG--GFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESS--DSV 439
L G F G G +SP + + ++ + T+ + L E L+SS S
Sbjct: 398 PLPGLFPRLGTTGILNSPVESLSSIKG---FPTISTIPMRPLMHE-----NLDSSRKSSC 449
Query: 440 TDQCLDNLTSS-DRIAALDTSKGVGTAKAKD-DVTAL-----NAKIMELQRKWNDTCQSL 492
QC+ N ++ A + K K + +AL NAK + K ++T +L
Sbjct: 450 CSQCMQNYERELEKFVANELDKPSSVTKPEGAKASALPPWLQNAKAQDEDAKKHETTDNL 509
Query: 493 HRTQLVPKLDIRQRSHVQLSEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISS 552
+ LM RK + + + C P H L++
Sbjct: 510 DK---------------------ELM--RKQKAQELQKKWQDTCLRLHPNFHNLNKFGLE 546
Query: 553 AEQNATIPLSSEANNVNFQSRLPINSSTKPQSNNDEHL-LPPHPLADLYKPHEHTSFSFL 611
++PL+ + N P + E L L +PL KP E + S L
Sbjct: 547 RTAPVSLPLTG-LYSPNLLGHQPSQPKLQLNKGFGETLQLKTNPLL-ASKPSEKVA-SIL 603
Query: 612 ---ASVTTDLGLGKIYPSTRQEANTPKLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSS 668
+ V T+L LG+ N +++ E+ + +S G + V + S
Sbjct: 604 RPGSPVRTELALGR--------KNDSEIL--AEETHKERVKDLLGCISSGPENKVCELRS 653
Query: 669 CSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW 728
T D YK L + EKV WQ EA ++ +V+++++GNG+ G+ K +W
Sbjct: 654 SKFIETS---DIDSYKRLLKGILEKVWWQQEAASALATSVTQFKLGNGKRRGTVPKGDMW 710
Query: 729 LAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLR 788
L FLGPD+VGKKK+A+ALAE+V G+ I + + S+++ + I +R
Sbjct: 711 LLFLGPDRVGKKKMATALAELVSGSNP--ITICLGSKRKSDGESEI-----------SIR 757
Query: 789 GKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
G+ ++D I + R +SV+ L+D D+ +D +V+ S+ +A+ G+FTDS+GR++S+ +I
Sbjct: 758 GRTVLDRISEAIRRNRFSVIVLDDFDE-SDLLVRGSIRRAMERGRFTDSHGREISLGNII 816
Query: 849 FVATSTILKG--KHSVHPQTTPVKFSEEIILGAKR--WQMQTAISHGFADAARGSGMNVK 904
F+ T+T + KH + EE G R WQ++ ++S
Sbjct: 817 FILTATWIPDDMKHLSNGNM----LEEEKFAGLARRTWQLKLSVSEQ------------T 860
Query: 905 VTPRKENSNPESRRKRKRTDDGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEK-FD 963
V R E + E R + R + G + + D+ D +L + + D +E +
Sbjct: 861 VKRRAEWAQGEERCLKPRLETGSAIAFDLNECADAEDEKTDGSLNSSDVTTDHETEHGLN 920
Query: 964 SDTICENSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYE 1023
+ + + + + + D VF+P++F + I I+ KF G ++ LE+
Sbjct: 921 TRQLSFTTASASREMLNTVDDAIVFKPVDFSPIKHSITSSIKKKFSSIVGEKMSLELQEN 980
Query: 1024 ILVQILAATWLSDRKKAIENWIENVVLRSFYEVRRK 1059
+ +I + WL + +E W EN ++ S E++ +
Sbjct: 981 AVEKITSGVWLGNTN--VEEWTENFLVPSLKELKAR 1014
>gi|224098627|ref|XP_002311226.1| predicted protein [Populus trichocarpa]
gi|222851046|gb|EEE88593.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 307 bits (786), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 205/495 (41%), Positives = 286/495 (57%), Gaps = 22/495 (4%)
Query: 611 LASVTTDLGLGKIYPSTRQEANTPKLIDNKE--QCFSGSISAEFDAVSEGTF--HNVVQS 666
+ SVTTDLGL T E ++ E Q SGS SA D V G+ H S
Sbjct: 1 MTSVTTDLGLRISSVPTSNELKKTVNQNHMELPQDRSGSFSANVDVV-HGSMSDHWAPSS 59
Query: 667 SSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRG 726
SS S+P G FD + K L A+ E+VGWQDEAI ISQ ++R + N + G++ +
Sbjct: 60 SSSSSPDYGGQFDLSNAKMLFRAVVERVGWQDEAIRVISQTIARCKARNEKRQGASLRGD 119
Query: 727 IWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCK 786
IW +F GPD+ GKKKIASALAEI++G++ I D+S++ + + +FD ++ K
Sbjct: 120 IWFSFCGPDRRGKKKIASALAEIIYGSRENFISADLSAQDGMIHTHMLFDHPEVNGYTVK 179
Query: 787 LRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISG 846
LRGK +VD++ E KP S+VFLE++DK AD Q SL+ AI TGKF DS+GR++ IS
Sbjct: 180 LRGKTVVDFVAGELCKKPLSIVFLENIDK-ADVQAQKSLSHAIQTGKFADSHGREIGISN 238
Query: 847 MIFVATSTILKGK--HSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVK 904
IFV TST+ + K S++ +T +SEE I + W ++ I D M
Sbjct: 239 AIFVTTSTLTEDKVCSSINEFST---YSEERISRVRDWPVKILIEQALDDEV--GKMVAP 293
Query: 905 VTPRKENSNPESRRKRKRTDDGDSPINSQKQVDDSFRSY------LDLNLPADEAEE-DT 957
T RK S KRK + ++ Q+ + R++ LDLNLPA+E + DT
Sbjct: 294 FTLRKGVSGSIFLNKRKLV-GANQNLDRQEIKEMVKRAHKTSARNLDLNLPAEENDVLDT 352
Query: 958 SSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVL 1017
D+D +NS AWL+DF ++ DA F+P +FD LAE+IL E+ F + G E L
Sbjct: 353 DDGSSDNDHASDNSKAWLQDFLEKIDARVFFKPFDFDALAERILNELNGCFHKIVGSECL 412
Query: 1018 LEIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLL 1077
L+ID ++ Q+LAA +LSDRK+ +E+W+E V+ F EV R++ A S+VKLVA +GL
Sbjct: 413 LDIDPKVTEQLLAAAYLSDRKRVVEDWVEQVLGWGFVEVLRRYKLKANSIVKLVACKGLF 472
Query: 1078 VEEEASGIRLP-KII 1091
VEE SG LP KII
Sbjct: 473 VEERMSGDHLPTKII 487
>gi|15242850|ref|NP_200579.1| heat shock protein-like protein [Arabidopsis thaliana]
gi|9759268|dbj|BAB09589.1| 101 kDa heat shock protein; HSP101-like protein [Arabidopsis
thaliana]
gi|332009558|gb|AED96941.1| heat shock protein-like protein [Arabidopsis thaliana]
Length = 990
Score = 298 bits (762), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 306/1097 (27%), Positives = 490/1097 (44%), Gaps = 183/1097 (16%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR ++ +Q L+ E+A VL+ ++ A +R H QTT LHV + LL P+ LR AC R
Sbjct: 1 MRAGLSTIQQTLTPEAATVLNQSIAEAARRNHGQTTPLHVAATLLASPAGFLRRACIRSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSV--EFPPISNSLMAAIKRSQAQQRRN-PDNY 117
S P LQ RALELC VA +RLP++ + PPISN+LMAA+KR+QA QRR P+
Sbjct: 61 PNSSHP-LQCRALELCFSVALERLPTATTTPGNDPPISNALMAALKRAQAHQRRGCPEQ- 118
Query: 118 HLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPP 177
QQ +KV+L+ +++ILDDP SRV EA F S +K A I+ S+
Sbjct: 119 -------QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK-ATIEQSLNN--- 167
Query: 178 RLSLTRCPPIFLYNLTDSF-PGRAG---------LKLPFGPDDV------DENCRRIGEV 221
S+T P + ++ +F PG G +L V +++ R+ ++
Sbjct: 168 --SVTPTPIPSVSSVGLNFRPGGGGPMTRNSYLNPRLQQNASSVQSGVSKNDDVERVMDI 225
Query: 222 LAGRDEKKGKNPLLVGVC-ANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVG 280
L GR +K KNP+LVG ++ ++ + G+VG + VV +E EI+
Sbjct: 226 L-GRAKK--KNPVLVGDSEPGRVIREILKKIEVGEVGNL--AVKNSKVVSLE-EISSDKA 279
Query: 281 GRVNVEMMMLKFKEVES-AVGRCSGPGVVVNYGELKVLVSD--------SVSTEAARFVV 331
R+ +L+ + S +G G GV+++ G+LK LV +V+ E R V
Sbjct: 280 LRIKELDGLLQTRLKNSDPIG---GGGVILDLGDLKWLVEQPSSTQPPATVAVEIGRTAV 336
Query: 332 SQLTSLLKSGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGSFVP 391
+L LL+ G +LW IG A + ETYL+ P ++ DWDLQ + + K+ G F
Sbjct: 337 VELRRLLEKFEG-RLWFIGTA-TCETYLRCQVYHPSVETDWDLQAVSVAAKAPASGVFPR 394
Query: 392 FGGFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSD 451
S K+ V + C C + E+E+A + DSV+ + + +
Sbjct: 395 LANNLESFTPLKSFVPANRTLKC-CPQCLQSYERELAEI------DSVSSPEVKSEVAQP 447
Query: 452 RIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQL 511
+ + + AK D + AKI E+Q+KWND C LH
Sbjct: 448 K----QLPQWLLKAKPVDRLP--QAKIEEVQKKWNDACVRLH------------------ 483
Query: 512 SEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQ 571
P H ++ I I L++ + N
Sbjct: 484 -----------------------------PSFHNKNERIVPIP--VPITLTTSPYSPNML 512
Query: 572 SRLPINSSTKPQSNNDE--HLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQ 629
R P+ +P E HL P PL + S V TDL LG+
Sbjct: 513 LRQPLQPKLQPNRELRERVHLKPMSPLVAEQAKKKSPPGS---PVQTDLVLGR------- 562
Query: 630 EANTPKLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIA 689
++ K D + + F G IS+E +V +V+Q + G D +K L
Sbjct: 563 AEDSEKAGDVQVRDFLGCISSE--SVQNNNNISVLQKE-----NLGNSLDIDLFKKLLKG 615
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+ EKV WQ++A ++ VS+ ++GNG+ G SK +WL F GPD+VGK+K+ SAL+ +
Sbjct: 616 MTEKVWWQNDAAAAVAATVSQCKLGNGKRRGVLSKGDVWLLFSGPDRVGKRKMVSALSSL 675
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
V+G I + + S Q NS F RGK +D I + + P+SV+
Sbjct: 676 VYGTNP--IMIQLGSRQDAGDGNSSF------------RGKTALDKIAETVKRSPFSVIL 721
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPV 869
LED+D+ AD +V+ S+ +A+ G+ DS+GR++S+ +IFV T+ S H T
Sbjct: 722 LEDIDE-ADMLVRGSIKQAMDRGRIRDSHGREISLGNVIFVMTA-------SWHFAGTKT 773
Query: 870 KFSEEII----LGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDD 925
F + L ++ W+++ + F R S + + E R + + +
Sbjct: 774 SFLDNEAKLRDLASESWRLRLCMREKFGK-RRASWL----------CSDEERLTKPKKEH 822
Query: 926 GDS---PINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQT 982
G +N DD + DL D+ E+ F + D +
Sbjct: 823 GSGLSFDLNQAADTDDGSHNTSDLTTDNDQDEQG-----FSGKLSLQCVPFAFHDMVSRV 877
Query: 983 DAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIE 1042
D F+ ++F + +I + +F+ G + +E++ E L +IL+ WL + +E
Sbjct: 878 DDAVAFRAVDFAAVRRRITETLSERFETIIGESLSVEVEEEALQRILSGVWLG--QTELE 935
Query: 1043 NWIENVVLRSFYEVRRK 1059
WIE ++ +++ +
Sbjct: 936 EWIEKAIVPVLSQLKAR 952
>gi|222615364|gb|EEE51496.1| hypothetical protein OsJ_32651 [Oryza sativa Japonica Group]
Length = 926
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 290/1001 (28%), Positives = 458/1001 (45%), Gaps = 175/1001 (17%)
Query: 170 PSVTQFPPRLSLTRCPPIFLYNLTDS----FPGRAGLKLPFGPDDVDENCRRIGEVLAGR 225
P + + P R TR PP+FL + + P AG G +ENCRRI E+L+
Sbjct: 2 PLLGRLPTR---TRPPPLFLCSFAAADDADVPSPAGNLAGAG----EENCRRIAEILS-- 52
Query: 226 DEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNV 285
+G+NP+LVGV A SA F + P +I +D ++ R ++
Sbjct: 53 ---RGRNPMLVGVGAASAADDFAAAS--------PYRIIHVDPNTID---------RSDL 92
Query: 286 EMMMLKFKEVESAVGRCSGPGVVVNYGELKVLV--SDSVSTEAARFVVSQLTSLLKSGNG 343
+ +A + G++++ G+LK LV D+ + E R VV+++T +L++ +
Sbjct: 93 GV---------AAAMASATSGLIISIGDLKQLVPDEDAEAQEKGRRVVAEVTRVLETHSK 143
Query: 344 -EKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHW--------------------- 381
++W++G + +YETYL L+KFP +D DWDLQLLPI
Sbjct: 144 VGRVWVMGWSATYETYLAFLSKFPLVDKDWDLQLLPITAVHAAATAGPAAAAAGLMPPAT 203
Query: 382 --------KSSLMGSFVPFGGFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKL 433
+SLM SFVPFGGF + + + + C C +K EQEVA ++
Sbjct: 204 TVAAFSKPAASLMDSFVPFGGFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIIS- 262
Query: 434 ESSDSVTDQCLDNLTS-SDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSL 492
S + D L S + + + G KA+DD LN+KI+ L++KWN+ C L
Sbjct: 263 ASGITAEDHHQGGLPSLLQNGSMMGPNNGFDPVKARDDRMVLNSKILNLRKKWNEYCLRL 322
Query: 493 HRTQLVPKLDIRQRSHVQLSEFVRLMA-----NRKGSSSKYPSLCESQCTNPSPGAHMLS 547
H+ D ++ + F R + R +SSK Q P A
Sbjct: 323 HQ-------DHQRINRDPYKPFPRYIGVPTDKERSANSSKGSESVGVQKDVIKPCAVSAV 375
Query: 548 QNISSAEQNATIPLSSEANN---VNFQSRLPINSSTKPQSNNDEHLLPPH--PLADLYKP 602
+ S+A ++ ++++ N +N Q+R +K N E + L+++ P
Sbjct: 376 HSSSTARPISSPSVTNKRNEDLVLNLQAR-----HSKSDENLQERGMQSQHGTLSNVDNP 430
Query: 603 HEHTSFSFLASVTTDLGLG----------------KIYPSTRQEANTPKLIDN------- 639
+H S S A V TDL LG ++ S R PK +D+
Sbjct: 431 DDHVSPSSAAPVETDLVLGTPRECSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQ 490
Query: 640 ----KEQCFSGSISAEFDAVSEGTFHNVVQSSSCS-------APHTGEPFDPRDYKTLRI 688
C SI+ S T H+V + +P + D +YK L
Sbjct: 491 LSVQPNSCSWSSIN--VGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVE 548
Query: 689 ALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAE 748
L + VG Q+EA+ I +++ R R R G N + IWL F G D + KK+IA ALAE
Sbjct: 549 RLFKVVGRQEEALSAICESIVRCRSTESRR-GPN-RNDIWLCFHGSDSMAKKRIAVALAE 606
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
++ G+K LI++D++ + D+ D RGK +D I ++ K SV+
Sbjct: 607 LMHGSKDNLIYLDLNLQ---------------DWDDSSFRGKTGIDCIVEQLSKKRQSVL 651
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTP 868
FL+++D+ AD +VQ SL+ AI +G+F D G+ V I+ I V + ++++G S +
Sbjct: 652 FLDNIDR-ADCLVQDSLSDAIKSGRFQDMRGKVVDINDSIVVLSRSMIQG--SKNGLEEG 708
Query: 869 VKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPR--------KENSNPESRRKR 920
+ FSEE IL + +++ + G A + V V+PR S S+RK
Sbjct: 709 LSFSEEKILATRGHRLKILVEPGRAITSGCPSGKVVVSPRHFLTKIQASLCSGSISKRKL 768
Query: 921 KRTDD----GDSPINSQKQVDDSFRSYLDLNLPADEAE----EDTSSEKFDSDTICENSG 972
+DD +SP +S K++ + DLNLP DE E +D SS +S E S
Sbjct: 769 SISDDQEKLQESP-SSSKRLHRTSSVPFDLNLPVDEDEPLDADDDSSSHENSYGNTEKS- 826
Query: 973 AWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAAT 1032
++ D F+P +FD LA+ +L+E ++ G E +LEID + QILAA
Sbjct: 827 --IDALLHSVDGSINFKPFDFDKLADDMLQEFSNILRKNLGSECMLEIDVGAMEQILAAA 884
Query: 1033 WLSDR-KKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVA 1072
W S+ +K + W+E V RS E++ K + S ++LVA
Sbjct: 885 WKSEEDRKPVPTWLEQVFARSLDELKLKRKHVSSSTLRLVA 925
>gi|125578208|gb|EAZ19354.1| hypothetical protein OsJ_34905 [Oryza sativa Japonica Group]
Length = 892
Score = 280 bits (717), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 256/886 (28%), Positives = 408/886 (46%), Gaps = 144/886 (16%)
Query: 306 GVVVNYGELKVLV--SDSVSTEAARFVVSQLTSLLKSGNG-EKLWLIGAAMSYETYLKML 362
G++++ G+LK LV D+ + E R VV+++T +L++ + ++W++G + +YETYL L
Sbjct: 47 GLIISIGDLKQLVPDEDAEAQENGRRVVAEVTRVLEAHSKVGRVWVMGWSATYETYLAFL 106
Query: 363 AKFPGLDNDWDLQLLPIHW-----------------------------KSSLMGSFVPFG 393
+KFP +D DWDLQLLPI +SLM SFVPFG
Sbjct: 107 SKFPLVDKDWDLQLLPITAVHAAPAAAGPAAAGGLMPPATTVAAFSKPAASLMDSFVPFG 166
Query: 394 GFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTS-SDR 452
GF + + + + C C +K EQEVA ++ S + D L S
Sbjct: 167 GFLCDNYEENSLTANSCPQALRCQQCNDKYEQEVATIIS-ASGITAEDHHQGGLPSLLQN 225
Query: 453 IAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLS 512
+ + + G K +DD LN+KI+ LQ+KWN+ C LH+ I + +
Sbjct: 226 GSMMGPNNGFDPVKVRDDRMVLNSKILNLQKKWNEYCLRLHQDC----QRINRDPYKPFP 281
Query: 513 EFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQN--------ISSAEQNATI-PLSS 563
++ + A+++ S+ NPS G+ + +S+ ++T P+SS
Sbjct: 282 RYIGVPADKERSA------------NPSKGSESIGVQKDVIKPCAVSAVHSSSTARPISS 329
Query: 564 EANNVNFQSRLPINSSTKPQSNNDEHLLP------PHPLADLYKPHEHTSFSFLASVTTD 617
+ L +N + S +DE+L L++ P +H S S A V TD
Sbjct: 330 PSVTNKRNEDLVLNLQAR-HSKSDENLQERGMQSQHGTLSNADNPDDHASPSSAAPVETD 388
Query: 618 LGL----------------GKIYPSTRQEANTPKLIDN-----------KEQCFSGSISA 650
L L ++ S R PK +D+ C SI+
Sbjct: 389 LVLCTPRDCSSKGSSSTCSKRVEDSERSVHLVPKKVDDLNLKHPQLSVQPNSCSWSSIN- 447
Query: 651 EFDAVSEGTFHNVVQSSSCS-------APHTGEPFDPRDYKTLRIALAEKVGWQDEAICT 703
S T H+V + +P + D +YK L L + VG Q+EA+
Sbjct: 448 -VGKTSHSTLHSVASGGFSAFGQWQKRSPLAAQNSDLSNYKLLVERLFKVVGRQEEAVSA 506
Query: 704 ISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVS 763
I +++ R R R S+ IWL F G D + KK+IA ALAE++ G+K LI++D++
Sbjct: 507 ICESIVRCRSTESRR--GPSRNDIWLCFHGSDSMAKKRIAVALAELMHGSKENLIYLDLN 564
Query: 764 SEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQS 823
+ D+ D RGK +D I ++ K SV+FL+++D+ AD +VQ
Sbjct: 565 LQ---------------DWDDSSFRGKTGIDCIVEQLSKKRRSVLFLDNIDR-ADCLVQD 608
Query: 824 SLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIILGAKRWQ 883
SL+ AI +G+F D G+ V I+ I V + +++ G S + + FSEE IL + +
Sbjct: 609 SLSDAIKSGRFQDMRGKVVDINDSIVVLSRSMIHG--SKNGLEEGLSFSEEKILATRGHR 666
Query: 884 MQTAISHGFADAARGSGMNVKVTPR--------KENSNPESRRKRKRTDD----GDSPIN 931
++ + G A + V V+PR S S+RK +DD +SP +
Sbjct: 667 LKILVEPGRAITSGCPSGKVVVSPRHFLTKIQASLCSGSISKRKLSMSDDQEKLQESP-S 725
Query: 932 SQKQVDDSFRSYLDLNLPADEAE----EDTSSEKFDSDTICENSGAWLEDFFDQTDAIAV 987
S K++ + DLNLP DE E +D SS +S E S ++ D
Sbjct: 726 SLKRLHRTSSIPFDLNLPVDEDEPFDADDDSSSHENSYGNTEKS---IDALLHSVDGSIN 782
Query: 988 FQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIEN 1047
F+P +FD LA+ +L+E ++ G E +LEID + QILAA W S+ K ++ W+E
Sbjct: 783 FKPFDFDKLADDMLQEFSNILRKNLGAECMLEIDVGAMEQILAAAWKSEDKGPVQTWLEQ 842
Query: 1048 VVLRSFYEVRRKHHFTAGSVVKLVAHEGLL--VEEEASGIRLPKII 1091
V RS E++ K+ + S ++LV E L V+ + G+ LP I
Sbjct: 843 VFARSLDELKLKYKHVSSSTLRLVPCEDTLPTVKGDGLGVLLPPRI 888
>gi|297611031|ref|NP_001065527.2| Os11g0104300 [Oryza sativa Japonica Group]
gi|255679687|dbj|BAF27372.2| Os11g0104300 [Oryza sativa Japonica Group]
Length = 435
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 165/399 (41%), Positives = 233/399 (58%), Gaps = 58/399 (14%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLL-REACDRV 59
M T V ARQCLS + LD AV +R+R H+QTTSLH++S+LL P+ L R+A R
Sbjct: 1 MPTPVAAARQCLSPAAVPALDAAVASSRRRAHAQTTSLHLISSLLAPPAPPLLRDALARA 60
Query: 60 QSYSVSPKLQFRALELCLGVAFDRLPSSKSV-------EFPPISNSLMAAIKRSQAQQRR 112
+S + SP++Q +AL+LC V+ DRLPS + + PP+SNSLMAAIKRSQA QRR
Sbjct: 61 RSAAYSPRVQLKALDLCFAVSLDRLPSVSASSSSSGAADEPPVSNSLMAAIKRSQANQRR 120
Query: 113 NPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPS- 171
NPD +H QT + +KV+L + VLAILDDP+ SRVF EAGF S DIKLAI++P+
Sbjct: 121 NPDTFHFYHQAATAQTPAAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIKLAILRPAP 180
Query: 172 ----VTQFPPRLSLTRCPPIFLYNLTDS----FPGRAGLKLPFGPDDVDENCRRIGEVLA 223
+ + P R TR PP+FL + + P AG G +ENCRRI E+L+
Sbjct: 181 PMPLLGRLPTR---TRPPPLFLCSFAAADDADVPSPAGNLAGAG----EENCRRIAEILS 233
Query: 224 GRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRV 283
+G+NP+LVGV A SA F + + + P I D+
Sbjct: 234 -----RGRNPMLVGVGAASAADDFAAASPYRIIHVDPNTIDRSDL--------------- 273
Query: 284 NVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLV--SDSVSTEAARFVVSQLTSLLKSG 341
V +A+ + G++++ G+LK LV D+ + E R VV+++T +L++
Sbjct: 274 ----------GVAAAMASATS-GLIISIGDLKQLVPDEDAEAQEKGRRVVAEVTRVLETH 322
Query: 342 NG-EKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI 379
+ ++W++G + +YETYL L+KFP +D DWDLQLLPI
Sbjct: 323 SKVGRVWVMGWSATYETYLAFLSKFPLVDKDWDLQLLPI 361
>gi|22329388|ref|NP_172200.2| P-loop containing nucleoside triphosphate hydrolase domain and Clp-N
motif-containing protein [Arabidopsis thaliana]
gi|20260490|gb|AAM13143.1| unknown protein [Arabidopsis thaliana]
gi|30725704|gb|AAP37874.1| At1g07200 [Arabidopsis thaliana]
gi|332189970|gb|AEE28091.1| P-loop containing nucleoside triphosphate hydrolase domain and Clp-N
motif-containing protein [Arabidopsis thaliana]
Length = 422
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 173/493 (35%), Positives = 242/493 (49%), Gaps = 99/493 (20%)
Query: 611 LASVTTDLGLGKIYPSTRQEANT----PKLIDNKEQCFSGSISAEFDAVSEGTFHNVVQS 666
L+ VTTD GLG IY S QE+ T P L+ +
Sbjct: 17 LSCVTTDFGLGVIYASKNQESKTTREKPMLV----------------------------T 48
Query: 667 SSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRG 726
+ S HT + +D+K+LR L+ KV WQ EA+ ISQ + + + R N G
Sbjct: 49 LNSSLEHTYQ----KDFKSLREILSRKVAWQTEAVNAISQIICGCKTDSTR---RNQASG 101
Query: 727 IWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCK 786
IWLA LGPDKVGKKK+A L+E+ FG K I VD +E C D K
Sbjct: 102 IWLALLGPDKVGKKKVAMTLSEVFFGGKVNYICVDFGAEH----------CS----LDDK 147
Query: 787 LRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISG 846
RGK +VDY+ E KP+SVV LE+++KA P Q L++A+STGK D +GR +S+
Sbjct: 148 FRGKTVVDYVTGELSRKPHSVVLLENVEKAEFPD-QMRLSEAVSTGKIRDLHGRVISMKN 206
Query: 847 MIFVATSTILKGKHSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVT 906
+I V TS I K + H PVKF EE +L A+ W++Q + G V
Sbjct: 207 VIVVVTSGIAKDNATDHV-IKPVKFPEEQVLSARSWKLQIKL---------GDATKFGVN 256
Query: 907 PRKENSNPESRRKRKRTDDGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDT 966
RK R + + RSYLDLNLP +E E F D
Sbjct: 257 KRKYELETAQRAVKVQ------------------RSYLDLNLPVNETE-------FSPDH 291
Query: 967 ICENSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILV 1026
E+ AW ++F ++ D F+P++FD LA+ I +I F+R FG E LE+D E+++
Sbjct: 292 EAEDRDAWFDEFIEKVDGKVTFKPVDFDELAKNIQEKIGSHFERCFGSETHLELDKEVIL 351
Query: 1027 QILAATWL------SDRKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLLVEE 1080
QILAA+W + + ++ W++ V+ RSF E ++K+ VKLVA L
Sbjct: 352 QILAASWSSLSSGEEEGRTIVDQWMQTVLARSFAEAKQKYGSNPMLGVKLVASSSGL--- 408
Query: 1081 EASGIRLPKIINV 1093
ASG+ LP ++V
Sbjct: 409 -ASGVELPAKVDV 420
>gi|255584936|ref|XP_002533182.1| ATP binding protein, putative [Ricinus communis]
gi|223527016|gb|EEF29205.1| ATP binding protein, putative [Ricinus communis]
Length = 983
Score = 232 bits (592), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 231/900 (25%), Positives = 401/900 (44%), Gaps = 144/900 (16%)
Query: 212 DENCRRIGEVLAGRDEKKGKNPLLVGVC-ANSALKGFVESVNGGKVGLFPRQIYGL--DV 268
+E +R+ ++L + K +NP+LVG +K ++ + ++G GL +V
Sbjct: 137 NEEVKRVVDILL---KNKKRNPVLVGESEPEMVVKELLKRIENKEIG------EGLLKNV 187
Query: 269 VCVEYEINEFVGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVS----- 323
+ E + +++ +++ L +E+ +G GV+++ G+LK LV +VS
Sbjct: 188 HVIHLEKDFLDKAQISSKIVELG-DSIETRIGDLDCGGVILDLGDLKWLVEQAVSFPATA 246
Query: 324 ---------TEAARFVVSQLTSLL----KSGNGEKLWLIGAAMSYETYLKMLAKFPGLDN 370
++A + VS++ LL + NG ++WLIG A + ETYL+ P ++N
Sbjct: 247 GVQQQQQIVSDAGKVAVSEMGKLLTRFGERSNG-RVWLIGTA-TCETYLRCQVYHPSMEN 304
Query: 371 DWDLQLLPIHWKSSLMGSFVPFG--GFFSSPPDFKNPVRS-----------------KSH 411
DWDLQ +PI ++ L G F G G SS + +P++ +
Sbjct: 305 DWDLQAVPIAPRAPLPGMFPRLGPNGILSSSVESLSPLKGFPTVTPALLRRPTENFDPAR 364
Query: 412 YSTLCYLCTEKLEQEVAAL-----------LKLESSDSVTDQCLDNLTSSDRIAALDTSK 460
++ C C + EQE+A + LK E++ ++ Q L N S D +DT K
Sbjct: 365 RTSCCPQCMQSYEQELAKITPKESERSSSELKSEATQTLLPQWLKNAKSQD----IDT-K 419
Query: 461 GVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEFVRLMAN 520
KD K +ELQ+KW+DTC LH P + + + LS M N
Sbjct: 420 SFDQTATKDQELMSKQKSVELQKKWHDTCLRLHPGYHQPNVVSERITQPALS-----MTN 474
Query: 521 RKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPINSST 580
P+L Q P G L++N+ Q S++
Sbjct: 475 LYN-----PNLHARQPFQPKLG---LNRNLGGTPQ--------------LNSKICGTPQL 512
Query: 581 KPQSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKL-IDN 639
PQ N+ P P + H + V TDL LG+ + + NTP++
Sbjct: 513 NPQLNSTIDRSPQSP----SQSHGQAVTPPGSPVRTDLVLGQ----AKSKENTPEIGHGE 564
Query: 640 KEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDE 699
+ + F G +++E + + A D +K L L EKV WQ +
Sbjct: 565 RTKDFLGRVASEPQP----------KLTELQAIKLLNALDADSFKRLLRGLLEKVWWQRD 614
Query: 700 AICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIH 759
A ++ V+R ++GNG+ G++SK IWL F GPD+VGKKK+A AL+++V+G+ ++
Sbjct: 615 AASAVATTVTRCKLGNGKQRGNSSKGDIWLLFTGPDRVGKKKMALALSDLVYGSNPIMV- 673
Query: 760 VDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADP 819
S+ C++ D RGK VD I + R P+SV+ LED+D+ AD
Sbjct: 674 -------------SLGSCRDDRESDVNFRGKTAVDRIVEAVRRNPFSVIMLEDIDE-ADM 719
Query: 820 IVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIILGA 879
IV+ S+ +A+ G+ +DS+GR++S+ +IF+ T+ L T + ++ L +
Sbjct: 720 IVRGSIKRAMERGRLSDSHGREISLGNVIFILTANWLPDNLKFLSNGTSLDETKLASLVS 779
Query: 880 KRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDDGDSPINSQKQVDDS 939
WQ++ ++ A R S ++ +V P K R+ + D + ++++ D
Sbjct: 780 GGWQLRLSLCEKTA-KRRASWLHDEVRPAK------PRKDSGLSFDLNEAADAEEDKADG 832
Query: 940 FRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNFDLLAEK 999
R+ DL + D +E + + + + T S + D VF+ ++ L +
Sbjct: 833 SRNSSDLTI--DHEDEQSLNNRLLTPTTSSVS----RELLKSVDDNIVFKSVDLGSLRSE 886
Query: 1000 ILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYEVRRK 1059
I + KF L+I + L +I A WLS + ++E W E ++ S +++ K
Sbjct: 887 ISNSVTKKFSTIISEGFSLDIQDDALEKIAAGLWLS--RGSLEEWTEEALVPSIRQLKLK 944
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 100 MAAIKRSQAQQRRN-PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGF 158
MAA+KR+QA QRR P+ QQ +KV+L+ +++ILDDP SRV EA F
Sbjct: 1 MAALKRAQAHQRRGCPEQ--------QQQPLLAVKVELEQLIISILDDPSVSRVMREASF 52
Query: 159 LSRDIKLAIIQ 169
S +K I Q
Sbjct: 53 SSPAVKATIEQ 63
>gi|413916916|gb|AFW56848.1| hypothetical protein ZEAMMB73_979207 [Zea mays]
Length = 1023
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 299/1161 (25%), Positives = 484/1161 (41%), Gaps = 254/1161 (21%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR ++ +Q L+ E+A L A+ A +RRH QTT LHV +ALL P+ LLR+AC R
Sbjct: 1 MRADLSTIQQTLTPEAAAALARAIDEAARRRHGQTTPLHVAAALLAAPAGLLRQACARAA 60
Query: 61 SYSVSPK----------LQFRALELCLGVAFDRLPSSKSVEF--------PPISNSLMAA 102
+ P LQ RALELC VA DRLP++ S PP+SN+L+AA
Sbjct: 61 AAGAGPGAAGSAGGAHPLQCRALELCFSVALDRLPAAASAAAAAASHASGPPVSNALVAA 120
Query: 103 IKRSQAQQRRN-PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSR 161
+KR+QAQQRR P+ QQ +KV+L+ VL+ILDDP SRV EA F S
Sbjct: 121 LKRAQAQQRRGCPE--------AAQQPLLAVKVELEQLVLSILDDPSVSRVMREASFSSS 172
Query: 162 DIKLAIIQ-----------------PSVTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKL 204
+K I Q + T P S P+ +++ +L
Sbjct: 173 AVKTTIEQSLASPSPPPSAVSTPTVAATTTLAPSPS-----PLSRLGSANAY---MNPRL 224
Query: 205 PFGPDDVDENCRRIGEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIY 264
++ R++ +V+ + +NP+LVG A+ E+V + P +
Sbjct: 225 AAAAGGGGDDARKVLDVML---KPARRNPVLVGDAGPDAV--LKEAVRRIPMAGSP-SLA 278
Query: 265 GLDVVCVEYEINEFVGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSD--SV 322
G V+ +E ++ + G + + + V + G VV++ G+LK LV +
Sbjct: 279 GAKVLPLESDLAKLAGDKAALAARIGDLGPVIQRLLVDHG-AVVLDLGDLKWLVDGPAAA 337
Query: 323 STEAARFVVSQLTSLLKSGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWK 382
++E + VVS++ LL+ K+W +G A + TYL+ P ++ +WDLQ + I
Sbjct: 338 ASEGGKAVVSEMARLLRQFGSGKVWAVGTA-ACATYLRCKVYHPTMEAEWDLQAVSIARS 396
Query: 383 SSLMGSFVPFG---------GFFSS--------------PPDF--KNPVRSKSHYSTLCY 417
+ L G+ + G G S PP NP+ +K +C
Sbjct: 397 APLAGAALRPGSTGILGNSVGMLSHTLRPMPVTPTALRWPPGAGSDNPLMAKP---VMCL 453
Query: 418 LCTEKLEQEVA--ALLKLESSDSVTDQCLDNLT-----SSDRIAALDTSKGVGTAKAKDD 470
LC ++E+A A + E+ S + L SSD+ + K+
Sbjct: 454 LCKGSYDRELAKLAAEQKENPASRAEAAKPGLPHWMQPSSDQ------------PQTKEQ 501
Query: 471 VTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEFVRLMANRKGSSSKYPS 530
EL++KW +TC R+H NR G+ +
Sbjct: 502 ELKRKEAAEELEKKWRETCA---------------RTH----------GNRAGAPALSLG 536
Query: 531 LCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSNNDEHL 590
L P P + Q++ + + N N++ KP+
Sbjct: 537 LA---ALVPRP-------PVEPKIQHSRGGVPTLQMNTNWE---------KPEGT----- 572
Query: 591 LPPHPLADLYKPHEHTSFSFLAS-VTTDLGLGKIYPSTRQEANTPKLIDNKEQCFSGSIS 649
P ++L K S L S V TDL LG + P E D KE G S
Sbjct: 573 ----PTSELRK-------SPLGSPVKTDLALGPMDPGATVEN------DQKENYTEGLTS 615
Query: 650 AEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVS 709
+ ++ + D +K L L +KV WQ +A I+ V
Sbjct: 616 MQKAKIAGIS-------------------DIESFKRLLKVLTQKVSWQSDAASAIAAVVI 656
Query: 710 RWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVS 769
+ R G+G+ ++ IWL F+GPD+ GK+K+ +AL+E++ + + V+ + R+S
Sbjct: 657 QCRTGSGKRRNIGTRGDIWLLFVGPDQAGKRKMVNALSELMV--NAQPVVVNFGGDSRLS 714
Query: 770 QPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAI 829
+ + N F GK +D + + R P SV+ LE +D+ D +V+ + +A+
Sbjct: 715 KDGNGL---NPGFW-----GKTSLDRVTEAVRQNPCSVIILEGIDQ-VDAVVRGKIKRAM 765
Query: 830 STGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIIL--GAKRWQMQTA 887
TG+ DS GR+VS+ +IFV T+ L + P+ + E +L + WQ++ +
Sbjct: 766 ETGRLVDSRGREVSLGNVIFVLTTNWLP-EELRRPKFETLLQDEGRMLEVASSNWQLELS 824
Query: 888 ISHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTD---DGDSPINSQKQVDDSFRSYL 944
I E ++ + R D D P K++ L
Sbjct: 825 I--------------------------EDKQVKHRADWLCDDARPAKVAKELSGGQGLSL 858
Query: 945 DLNLPADEAEEDTSSEKFDSDTICE------------NSGAWLEDFFDQTDAIAVFQPLN 992
DLNL A A +DT + SD E ++ A D + D VF+P++
Sbjct: 859 DLNL-AVGALDDTDGSRNSSDLSVEQEHEKGHLAVKCSTPAPDYDLLNLVDDAIVFRPVD 917
Query: 993 FDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRS 1052
F + + I KF G ID + + ++ + WL+D K +E+W E V++ S
Sbjct: 918 FAPFRKTVTDCISAKFDSVIGSCNSFRIDEDAVDRMAGSIWLTDEK--LEDWAEKVLMPS 975
Query: 1053 FYEVR-RKHHFTAGSVVKLVA 1072
+ H++ +VV++ A
Sbjct: 976 IERLWCNVKHYSGRAVVRIAA 996
>gi|297736015|emb|CBI24053.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 196/759 (25%), Positives = 319/759 (42%), Gaps = 134/759 (17%)
Query: 331 VSQLTSLLKSGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGSFV 390
+ +L + G+ +LWLIG A + ETYL+ P ++NDWDLQ +PI ++ + G F
Sbjct: 1 MGKLLATFGEGSNGRLWLIGTA-TCETYLRCQVYHPSMENDWDLQAVPIAARTPVPGLFS 59
Query: 391 PFG--GFFSSPPDFKNPVRS-----------------KSHYSTLCYLCTEKLEQEVAALL 431
FG G SS + P+++ + + C C E EQE+ L
Sbjct: 60 RFGTNGILSSSVESLTPMKNFPTAITALPRRVSENMDPAQKMSCCPQCMENYEQELGKLE 119
Query: 432 KLESSDSVTDQCLDNLTSS-----DRIAALDTS-KGVGTAKAKDDVTALNAKIMELQRKW 485
E S ++ + SS ALD K ++ KD K +L +KW
Sbjct: 120 GQEFEKSSSEVKSEVSRSSLPQWLKNAKALDGDVKTTDQSQTKDQELIWKQKPQDLLKKW 179
Query: 486 NDTCQSLHRTQLVPKLDIRQRSHVQLSEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHM 545
NDTC LH P L+ + + LS A G + P L ++
Sbjct: 180 NDTCLHLHPNFHQPNLNSERITPTALSMTGLYNATLLGRQAFQPKLQPTR---------- 229
Query: 546 LSQNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSNNDEHLLPPHPLADLYKPHEH 605
N L +NS+ ++ + PP
Sbjct: 230 -----------------------NLGETLQLNSNLVANQPCEQAVTPPG----------- 255
Query: 606 TSFSFLASVTTDLGLGKIYPSTRQEANTPKLIDNKEQCFSGSISAEFDAVSEGTFHNVVQ 665
+ V TDL LG+ + E T K+ + F IS+E S FH + Q
Sbjct: 256 ------SPVRTDLVLGR---TKINETTTEKIHKEHVKDFFQCISSE----SLNKFHEL-Q 301
Query: 666 SSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKR 725
+ S P D K L LAEKV WQ +A T++ V++ ++GNG+ + SK
Sbjct: 302 NDKLS------PLDADSVKKLLKGLAEKVSWQQDAARTVATTVTQCKMGNGKRRSAGSKG 355
Query: 726 GIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC----QNID 781
IWL F GPD++GKKK+A+AL+E+V G N I C ++
Sbjct: 356 DIWLLFTGPDRIGKKKMAAALSELVCG------------------VNPIMICLGSRRDDG 397
Query: 782 FCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRD 841
D RGK VD I + R +SV+ LED+D+ AD +VQ S+ +A+ G+ DS+GR+
Sbjct: 398 ELDMNFRGKTAVDRIAEAVRRNHFSVIMLEDIDE-ADMLVQGSIKRAMERGRLVDSHGRE 456
Query: 842 VSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGM 901
VS+ +IF+ T+ L +T + + + WQ++ + S A R + +
Sbjct: 457 VSLGNVIFILTANWLVDNRKSLSNSTLLNEEKLASIAGGGWQLKLSASEKSA-KRRANWL 515
Query: 902 NVK---VTPRKENSNPESRRKRKRTDDGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTS 958
+ + PRKEN + S + D D + + D + D P + TS
Sbjct: 516 HDEDRSTKPRKENGSALSFDLNQAADTEDDRADGSRNSSDLTIDHEDEQGPENRCLPPTS 575
Query: 959 SEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLL 1018
+ + + + D + F+P++F+ + ++ I KF G ++ +
Sbjct: 576 ASR---------------ELLNSVDNVITFKPVDFNPIRHQVRSCIARKFSSVMGDKLSI 620
Query: 1019 EIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYEVR 1057
+++ E L +IL WL + +E W E V++ F++++
Sbjct: 621 QVEDEALEKILGGVWLG--RSGLEEWAEKVLVPGFHQLK 657
>gi|449464332|ref|XP_004149883.1| PREDICTED: uncharacterized protein LOC101218882 [Cucumis sativus]
Length = 1029
Score = 199 bits (507), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 264/535 (49%), Gaps = 65/535 (12%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR + Q L+ ++A +L+ A+ A +R H QTT +HV + LL P++ LR+AC +
Sbjct: 1 MRAGLGTILQTLTSDAATILNQAIAEAARRNHGQTTPVHVAATLLASPTAFLRQACIKSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEF---PPISNSLMAAIKRSQAQQRRNPDNY 117
S P LQ RALELC VA +RLP+++++ PPISN+LMAA+KR+QA QRR
Sbjct: 61 PNSSHP-LQCRALELCFSVALERLPTAQNLSAASEPPISNALMAALKRAQAHQRRGSSEL 119
Query: 118 HLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPP 177
QQ +KV+ + V++ILDDP SR+ EA F S +K II+ S+
Sbjct: 120 P-------QQPLLAVKVEFEQLVISILDDPSVSRIMREASFSSPAVK-GIIERSLNS--- 168
Query: 178 RLSLTRCPPIFLYNLTDS-FPGRAGLKLP-FGPDDV-------DENCRRIGEVLAGRDEK 228
S+ PI L + S P R+ P F V +E +RI ++L R
Sbjct: 169 SASVVNSSPIGLRSSHSSPSPNRSLYLNPRFHQGSVNQLGRPREEEVKRIVDIL--RRPT 226
Query: 229 KGKNPLLVGVCANSA-LKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEM 287
K +NP++VG A L+ F +N K L + +++ +E EF R +
Sbjct: 227 K-RNPIVVGDSETDAMLEEFFRRIN--KKELSEGSLENAEIIRLE---KEFASDREQIPT 280
Query: 288 MMLKFKE-VESAVGRCSGPGVVVNYGELKVLVSDSVS--TEAARFVVSQLTSLLKSGNGE 344
+ + ++ V S + + S ++++ G L+ L S +EA R V ++ LL NG
Sbjct: 281 KLDELEDLVASQLAKSSSGSIILDLGNLEWLFDQPASSVSEAGRAAVQKIGKLLTRFNG- 339
Query: 345 KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGSFVPFG----------- 393
+LWLIG A + ET+L+ P +++DWDL ++P+ K+ G + FG
Sbjct: 340 RLWLIGTA-TCETFLRCQIYHPSIESDWDLHVVPVVAKAPRSGLYPRFGTKEILGSPIES 398
Query: 394 ----GFFSSPP--DFKNPVRSKSHYS--TLCYLCTEKLEQEVAALLKLESSDSVTDQCLD 445
FF +PP +N S ++ S T C C +K EQE+ L+ ES S + D
Sbjct: 399 LSPLKFFPTPPISQLRNESESLNYGSRITCCSQCMQKYEQELHKLINEESEKSSSGVKTD 458
Query: 446 NLTSSDRIAALDTSK-------GVGTAKAKDDVTALNAKIMELQRKWNDTCQSLH 493
+ SS L +K V + + KD + + ELQ+KWN TC +H
Sbjct: 459 S-NSSPLPHWLQKAKDHSPNAESVDSKQNKDTELMVKQRTQELQKKWNTTCLQIH 512
Score = 156 bits (394), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 194/392 (49%), Gaps = 34/392 (8%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVG 738
D YK + L KV WQ +A T++ +++ ++GN + G+ SK IWL F GPDKVG
Sbjct: 632 DVDSYKKILKVLMGKVWWQRDAASTVANTITQRKLGNRKRQGAGSKGDIWLLFAGPDKVG 691
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K+K+ASA++E+V G+ ++ + + S+ +N D RG+ +D I +
Sbjct: 692 KRKMASAISELVSGS--IMVTICLGSQ------------RNGRGLDNNFRGRTPLDQIAE 737
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R P+SV+ LE++D+ AD + + SL +AI +G+ DSYGR++S+ +IF+ T+ L
Sbjct: 738 AVRKNPFSVIVLENIDE-ADVLFRGSLKRAIESGRLIDSYGREISLGNIIFILTTVWLPD 796
Query: 859 KHSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGM--NVKVTPRKENSNPES 916
E L + WQ++ ++S RG+ + + T ++ +NP
Sbjct: 797 DLKWFSDHNSFGEKELATLAGESWQLRLSLSEK-QSKRRGNWLCNEERFTKTRKGTNP-- 853
Query: 917 RRKRKRTDDGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLE 976
D + N++ D + DL + + E++ K +S T + L
Sbjct: 854 ----GLFFDLNEAANAEDDTPDGSHNSSDLTI---DHEDEYGLSKMESTT----ASPALT 902
Query: 977 DFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFE-VLLEIDYEILVQILAATWLS 1035
+ D D +F+P+NF+ + + I I KF G E + +E+ + L +ILA WLS
Sbjct: 903 ELQDIVDDAIIFKPVNFNHITQDIKTSINEKFFTIIGVEGISIELQDQALQKILAGVWLS 962
Query: 1036 DRKKAIENWIENVVLRSFYEVRRKHHFTAGSV 1067
+ ++E W E ++ SF ++ T GS
Sbjct: 963 N--TSLEEWAEKALVPSFNHLKACFPKTTGST 992
>gi|449529860|ref|XP_004171916.1| PREDICTED: uncharacterized protein LOC101223687 [Cucumis sativus]
Length = 1029
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 263/535 (49%), Gaps = 65/535 (12%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR + Q L+ ++A +L+ A+ A +R H QTT +HV + LL P++ LR+AC +
Sbjct: 1 MRAGLGTILQTLTSDAATILNQAIAEAARRNHGQTTPVHVAATLLASPTAFLRQACIKSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEF---PPISNSLMAAIKRSQAQQRRNPDNY 117
S P LQ RALELC VA +RLP+++++ PPISN+LMAA+KR+QA QRR
Sbjct: 61 PNSSHP-LQCRALELCFSVALERLPTAQNLSAASEPPISNALMAALKRAQAHQRRGSSEL 119
Query: 118 HLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPP 177
QQ +KV+ + V++ILDDP SR+ EA F S +K II+ S+
Sbjct: 120 P-------QQPLLAVKVEFEQLVISILDDPSVSRIMREASFSSPAVK-GIIERSLNS--- 168
Query: 178 RLSLTRCPPIFLYNLTDS-FPGRAGLKLP-FGPDDV-------DENCRRIGEVLAGRDEK 228
S+ PI L + S P R+ P F V +E +RI ++L R
Sbjct: 169 SASVVNSSPIGLRSSHSSPSPNRSLYLNPRFHQGSVNQLGKPREEEVKRIVDIL--RRPT 226
Query: 229 KGKNPLLVGVCANSA-LKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEM 287
K +NP++VG A L+ F +N K L + +++ +E EF R +
Sbjct: 227 K-RNPIVVGDSETDAMLEEFFRRIN--KKELSEGSLENAEIIRLE---KEFASDREQIPT 280
Query: 288 MMLKFKE-VESAVGRCSGPGVVVNYGELKVLVSDSVS--TEAARFVVSQLTSLLKSGNGE 344
+ + ++ V S + + S ++++ G L+ L S +EA R V ++ LL NG
Sbjct: 281 KLDELEDLVASQLAKSSSGSIILDLGNLEWLFDQPASSVSEAGRAAVQKIGKLLTRFNG- 339
Query: 345 KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGSFVPFG----------- 393
+LWLIG A + ET+L+ P +++DWDL ++P+ K+ G + FG
Sbjct: 340 RLWLIGTA-TCETFLRCQIYHPSIESDWDLHVVPVVAKAPRSGLYPRFGTKEILGSPIES 398
Query: 394 ----GFFSSPP--DFKNPVRSKSHYS--TLCYLCTEKLEQEVAALLKLESSDSVTDQCLD 445
FF +PP +N S ++ S T C C +K EQE+ L+ ES S D
Sbjct: 399 LSPLKFFPTPPISQLRNESESLNYGSRLTCCSQCMQKYEQELHKLINEESEKSSPGVKTD 458
Query: 446 NLTSSDRIAALDTSK-------GVGTAKAKDDVTALNAKIMELQRKWNDTCQSLH 493
+ SS L +K V + + KD + + ELQ+KWN TC +H
Sbjct: 459 S-NSSPLPHWLQKAKDHSPNAESVDSKQNKDTELMVKQRTQELQKKWNTTCLQIH 512
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 194/392 (49%), Gaps = 34/392 (8%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVG 738
D YK + L KV WQ +A T++ +++ ++GN + G+ SK IWL F GPDKVG
Sbjct: 632 DVDSYKKILKVLMGKVWWQRDAASTVANTITQRKLGNRKRQGAGSKGDIWLLFAGPDKVG 691
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K+K+ASA++E+V G+ ++ + + S+ +N D RG+ +D I +
Sbjct: 692 KRKMASAISELVSGS--IMVTICLGSQ------------RNGRGLDNNFRGRTPLDQIAE 737
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R P+SV+ LE++D+ AD + + SL +AI +G+ DSYGR++S+ +IF+ T+ L
Sbjct: 738 AVRKNPFSVIVLENIDE-ADVLFRGSLKRAIESGRLIDSYGREISLGNIIFILTTVWLPD 796
Query: 859 KHSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGM--NVKVTPRKENSNPES 916
E L + WQ++ ++S RG+ + + T ++ +NP
Sbjct: 797 DLKWFSDHNSFGEKELATLAGESWQLRLSLSEK-QSKRRGNWLCNEERFTKTRKGTNP-- 853
Query: 917 RRKRKRTDDGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLE 976
D + N++ D + DL + + E++ K +S T + L
Sbjct: 854 ----GLLFDLNEAANAEDDTPDGSHNSSDLTI---DHEDEYGLSKMESTT----ASPALT 902
Query: 977 DFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFE-VLLEIDYEILVQILAATWLS 1035
+ D D +F+P+NF+ + + I I KF G E + +E+ + L +ILA WLS
Sbjct: 903 ELQDIVDDAIIFKPVNFNHITQDIKTSINEKFFTIIGVEGISIELQDQALQKILAGVWLS 962
Query: 1036 DRKKAIENWIENVVLRSFYEVRRKHHFTAGSV 1067
+ ++E W E ++ SF ++ T GS
Sbjct: 963 N--TSLEEWAEKALVPSFNHLKACFPKTTGST 992
>gi|4587988|gb|AAD25929.1|AF085279_2 hypothetical protein [Arabidopsis thaliana]
Length = 798
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 214/410 (52%), Gaps = 58/410 (14%)
Query: 679 DPRD-----YKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLG 733
+PRD +K + L + V QDEA IS A+S+ S ++R +WL +G
Sbjct: 416 NPRDLNAESFKIIYRRLTDMVSGQDEAARVISCALSQ-------PPKSVTRRDVWLNLVG 468
Query: 734 PDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCD--CKLRGKV 791
PD VGK++++ LAEIV+ ++ + + VD+ + + Q + CD +LRGK
Sbjct: 469 PDTVGKRRMSLVLAEIVYQSEHRFMAVDLGAAE-----------QGMGGCDDPMRLRGKT 517
Query: 792 LVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVA 851
+VD+I++ P+ VVFLE+++KA D +Q SL+KAI TGKF DS+GR+V I IFV
Sbjct: 518 MVDHIFEVMCRNPFCVVFLENIEKA-DEKLQMSLSKAIETGKFMDSHGREVGIGNTIFVM 576
Query: 852 TSTILKGKHSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPR-KE 910
TS S T +SEE +L K Q++ I V P +
Sbjct: 577 TS-------SSQGSATTTSYSEEKLLRVKGRQVEIRIE------------TVSSLPMVRS 617
Query: 911 NSNPESRRKRKRTDDGD-----SPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSD 965
P S KRK G+ + S K+++ + LDLNLPA E E + EK+ +
Sbjct: 618 VYGPTSVNKRKLMGLGNLQETKDTVESVKRLNRTTNGVLDLNLPAQETEIE---EKYHCE 674
Query: 966 TICENSGAWLEDFFDQTDAIAV-FQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEI 1024
ENS WL + + I V F+P +F+ LAEKI + ++ F + + LLE+D +I
Sbjct: 675 ---ENSNVWLMNLKNHKRLIEVPFKPFDFEGLAEKIKKSVKENFDKCVRSDCLLEVDPKI 731
Query: 1025 LVQILAATWLSDRKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHE 1074
+ ++LAA + SD +K I+ +EN++ F ++ ++ T VVKLV +
Sbjct: 732 IERLLAAVYFSDSRKDIKELLENIMSPVFLRIKERYEITTSCVVKLVGRD 781
Score = 190 bits (482), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 174/302 (57%), Gaps = 34/302 (11%)
Query: 125 NQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRLSLTRC 184
NQ + S +KV+L+ +L+ILDDP+ SRVFGEAGF S ++KL+II+P P L +
Sbjct: 6 NQNSLSCVKVELRQLILSILDDPVVSRVFGEAGFRSSELKLSIIRP----VPHLLRYSSQ 61
Query: 185 PPIFLYNLT---DSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEKKGKNPLLVGVCAN 241
P+FL NLT + P R G +P + D + RRI V + KG+NPLLVGV A
Sbjct: 62 QPLFLCNLTGNPEPNPVRWGFTVPSLNFNGDLDYRRISAVFT---KDKGRNPLLVGVSAY 118
Query: 242 SALKGFVESVNGGKVG--LFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKFKEVESAV 299
L ++ S+ + + P +++GL V + EI++ + + + +F ++
Sbjct: 119 GVLTSYLNSLEKNQTDGMILPTKLHGLTAVNIGSEISDQISVKFDKTYTDTRFHDLGKLA 178
Query: 300 GRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWLIGAAMSYETYL 359
+ SGPG++++YG+L+V + + AA ++V++++ LL+ +G ++WLIGA S E Y
Sbjct: 179 EQGSGPGLLLHYGDLRVFTNGEGNVPAANYIVNRISELLRR-HGRRVWLIGATTSNEVYE 237
Query: 360 KMLAKFPGLDNDWDLQLLPI--------HWKSS-------------LMGSFVPFGGFFSS 398
KM+ +FP ++ DWDLQLL I H KS L+GSFVPFGGFFS+
Sbjct: 238 KMMRRFPNVEKDWDLQLLTITSLKPCLPHNKSRLLLLLLSLLLKQCLIGSFVPFGGFFST 297
Query: 399 PP 400
P
Sbjct: 298 TP 299
>gi|147803027|emb|CAN66169.1| hypothetical protein VITISV_000145 [Vitis vinifera]
Length = 1032
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 244/930 (26%), Positives = 376/930 (40%), Gaps = 221/930 (23%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR +Q L+ E+A VL ++ +AR+R H+Q T LHV + LL +SLLR AC + Q
Sbjct: 1 MRAGACTLQQTLTTEAASVLKHSLSLARRRGHAQVTPLHVAATLLSSRASLLRRACLKSQ 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEF---PPISNSLMAAIKRSQAQQRRNPDNY 117
+ LQ RALELC VA +RLP++ P +SN+L+AA+KR+QA QRR
Sbjct: 61 PNQSTHPLQCRALELCFNVALNRLPTTPGPLLHGQPSLSNALIAALKRAQAHQRRG--CI 118
Query: 118 HLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQF-- 175
QQ QQ +KV+L+ +++ILDDP SRV EAGF S +K + S +
Sbjct: 119 EQQQ----QQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKNNLEDSSASSVFQ 174
Query: 176 -----------PPRLSLTRC------PPIFLYNLTDSFPGRAGLKLPFGPD--------- 209
P S T P F ++ L F P
Sbjct: 175 CYSSSGGVFSSPCSPSPTETHRDIINPSTFWQTHILAYSSEQN-PLLFSPQKKLSSNTIT 233
Query: 210 ---DVDENCRRIGEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGG-KVGLFPRQIYG 265
V E+ + + EVL KK +N ++VG S +G V + G + G P ++
Sbjct: 234 DSTSVKEDLKLVLEVLL---RKKRRNTVIVGDSV-STTEGLVAELMGRIERGEVPEELKS 289
Query: 266 LDVVCVEYE-INEFVGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVST 324
V ++ + R VEM + K ++ G G ++ G+LK V +VS
Sbjct: 290 AHFVKFQFSPVTLRFMKREEVEMNLSDLKRKVDSLASGGGGGAIIYAGDLKWTVEAAVSD 349
Query: 325 EAARF-------------VVSQLTSLLK--SGNGEKLWLIGAAMSYETYLKMLAKFPGLD 369
F +V+++ LL + + ++WL+ A SY+TY++ K P L+
Sbjct: 350 RDGGFPSGEASAYNPIDHLVAEIGRLLSDYTTSNTRVWLMATA-SYQTYMRCQMKQPSLE 408
Query: 370 NDWDLQLLPIHWKSSLMGSFVPFGGF-----FSSPPDFKN-----------PVRSKSHYS 413
W LQ + VP GG SS D ++ P +K +
Sbjct: 409 IQWALQAVS-----------VPSGGLGLSLHASSVHDSRSQNQAHHVLETKPFAAKEEHD 457
Query: 414 TL--CYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVGTAKAKDDV 471
L C CT E+EV L + + + GV A+ KDD
Sbjct: 458 KLSCCAECTANYEKEVG---------------LFKSGQQKLLPSWLQAHGV-EARQKDD- 500
Query: 472 TALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEFV--RLMANRKGSSSKYP 529
++EL+RKWN C SLH+ + ++H+ S F L+ +S YP
Sbjct: 501 ------LVELRRKWNRLCHSLHQGR-------SNQNHLSSSMFSNQNLLGKSYSYTSSYP 547
Query: 530 SLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSNNDEH 589
QN+ P + N+++F NS+ KP N+
Sbjct: 548 WW---------------------PNQNSIFP---DLNSISF-----TNSALKP--NHASS 576
Query: 590 LLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKLIDNKEQCFSGSIS 649
L+P F S + G + +Q++ P L C +
Sbjct: 577 LVP--------------RFRRQQSCHIEFSFGNVM--HKQQSVEPSL-----DCLKKTEG 615
Query: 650 AEFD-AVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRI-----ALAEKVGWQDEAICT 703
+ ++ GT V S S P + + KT+R+ L E V WQ EAI
Sbjct: 616 KDVKITLALGT---SVYSDSGKLP------ELKGEKTIRLRDICKLLEENVPWQSEAISP 666
Query: 704 ISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVS 763
I++A+ +SK+ WL G D +GK+++A A+AE VFG+ + +++
Sbjct: 667 IAEALID---------SKSSKKETWLLLQGNDSIGKRRLAHAIAESVFGSADLVFRMNMR 717
Query: 764 SEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQS 823
N + C I + + R+ VV +ED+D A+P
Sbjct: 718 KLD-----NGVTPCSEI---------------LTEALRAHQKLVVMVEDVD-FAEPQFMK 756
Query: 824 SLTKAISTGKFTDSYGRDVSISGMIFVATS 853
L TG+F DS R+ S IF+ T+
Sbjct: 757 FLADGCETGEFRDSSKREGSFGQAIFILTT 786
>gi|359485128|ref|XP_002263442.2| PREDICTED: uncharacterized protein LOC100247938 [Vitis vinifera]
Length = 1045
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 301/1204 (25%), Positives = 482/1204 (40%), Gaps = 274/1204 (22%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR +Q L+ E+A VL ++ +AR+R H+Q T LHV + LL +SLLR AC + Q
Sbjct: 1 MRAGACTLQQTLTTEAASVLKHSLSLARRRGHAQVTPLHVAATLLSSRASLLRRACLKSQ 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEF---PPISNSLMAAIKRSQAQQRRNPDNY 117
+ LQ RALELC VA +RLP++ P +SN+L+AA+KR+QA QRR
Sbjct: 61 PNQSTHPLQCRALELCFNVALNRLPTTPGPLLHGQPSLSNALIAALKRAQAHQRRG--CI 118
Query: 118 HLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQF-- 175
QQ QQ +KV+L+ +++ILDDP SRV EAGF S +K + S +
Sbjct: 119 EQQQ----QQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKNNLEDSSASSVFQ 174
Query: 176 -----------PPRLSLTRC------PPIFLYNLTDSFPGRAGLKLPFGPD--------- 209
P S T P F ++ L F P
Sbjct: 175 CYSSSGGVFSSPCSPSPTETHRDIINPSTFWQTHILAYSSEQN-PLLFSPQKKLSSNPIT 233
Query: 210 ---DVDENCRRIGEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGG-KVGLFPRQIYG 265
V E+ + + EVL KK +N ++VG S +G V + G + G P ++
Sbjct: 234 DSTSVKEDLKLVLEVLL---RKKRRNTVIVGDSV-STTEGLVAELMGRIERGEVPEELKS 289
Query: 266 LDVVCVEYE-INEFVGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVST 324
V ++ + R VEM + K ++ G G ++ G+LK V +VS
Sbjct: 290 AHFVKFQFSPVTLRFMKREEVEMNLSDLKRKVDSLASGGGGGAIIYAGDLKWTVEAAVSD 349
Query: 325 EAARF-------------VVSQLTSLLK--SGNGEKLWLIGAAMSYETYLKMLAKFPGLD 369
F +V+++ LL + + ++WL+ A SY+TY++ K P L+
Sbjct: 350 RDGGFPNGEASAYNPIDHLVAEIGRLLSDYTTSNTRVWLMATA-SYQTYMRCQMKQPSLE 408
Query: 370 NDWDLQLLPIHWKSSLMGSFVPFGGFFSSPPDF--------------------KNPVRSK 409
W LQ + + S +G + + D P +K
Sbjct: 409 IQWALQAVSV--PSGGLGLSLHASSLINKAEDHCEKVSVHDSRSQNQAHHVLETKPFAAK 466
Query: 410 SHYSTL--CYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVGTAKA 467
+ L C CT E+EV L + + + GV A+
Sbjct: 467 EEHDKLSCCAECTANYEKEVG---------------LFKSGQQKLLPSWLQAHGV-EARQ 510
Query: 468 KDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEFV--RLMANRKGSS 525
KDD ++EL+RKWN C SLH+ + ++H+ S F L+ +
Sbjct: 511 KDD-------LVELRRKWNRLCHSLHQGR-------SNQNHLSSSMFSNQNLLGKSYSYT 556
Query: 526 SKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSN 585
S YP QN+ P + N+++F NS+ KP N
Sbjct: 557 SSYPWW---------------------PNQNSIFP---DLNSISF-----TNSALKP--N 585
Query: 586 NDEHLLPPHPLADLYKPHE--HTSFSFLASVTTDLGLGKIYPSTRQEANTPKLIDNKEQC 643
+ L+P ++ + H FSF G G +Q++ P L C
Sbjct: 586 HASSLVP------RFRRQQSCHIEFSF--------GNGM----HKQQSVEPSL-----DC 622
Query: 644 FSGSISAEFD-AVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIA-----LAEKVGWQ 697
+ + ++ GT V S S P + + KT+R+ L E V WQ
Sbjct: 623 LKKTEGKDVKITLALGT---SVYSDSGKLP------ELKGEKTIRLRDICKLLEENVPWQ 673
Query: 698 DEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKL 757
EAI I++A+ +SK+ WL G D +GK+++A A+AE VFG+ +
Sbjct: 674 SEAISPIAEALID---------SKSSKKETWLLLQGNDSIGKRRLAHAIAESVFGSADLV 724
Query: 758 IHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAA 817
+++ N + C I + + R+ VV +ED+D A
Sbjct: 725 FRMNMRKLD-----NGVTPCSEI---------------LTEALRAHQKLVVMVEDVD-FA 763
Query: 818 DPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIIL 877
+P L TG+F DS R+ S IF+ T+ G S + +
Sbjct: 764 EPQFMKFLADGCETGEFRDSSKREGSFGQAIFILTT----GDSSSYQERK---------- 809
Query: 878 GAKRWQMQTAISHGFADAARGS-GMNVKVTPRKENSNPESRRKRKRTDDGDS-------P 929
G K + + G+ M+ K RK + +R K RTD+ + P
Sbjct: 810 GNKSSVIHMKLQINLTIPTLGTPNMDHK---RKAEWDLSNRTKSPRTDEEEGSCLISVEP 866
Query: 930 INSQ-----KQVDDSFRSYLDLNLPADEAEED----------TSSEKFDSDTICENSGAW 974
NS+ +Q+ SF + LDLN+ ADE +E +S ++ T +N +
Sbjct: 867 GNSKILEFTRQL--SFNT-LDLNIRADEDDESKDKPRELSPISSDLTRETATDIQNPHGF 923
Query: 975 LEDFFDQTDAIAVFQPLNFDL-LAEKILREIQPKFQRAFGFE--VLLEIDYEILVQILAA 1031
LE ++ + + D + E L +I+ F+ + E V ++ ++L ++LA
Sbjct: 924 LESIENR---FTFKRKADQDREMREAFLSKIKGSFEVGYDSENTVSFSVEQKLLEEVLAG 980
Query: 1032 --TWLSDRKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIRLPK 1089
++L+ E W++ V S V+ ++LV +E+ G LPK
Sbjct: 981 CDSFLNS---LFEKWLKEVFQTSVKTVKIGGKEGMEVRLRLVGKGEKGLEDGFMGSSLPK 1037
Query: 1090 IINV 1093
I V
Sbjct: 1038 KIQV 1041
>gi|225440714|ref|XP_002275038.1| PREDICTED: chaperone protein ClpB1-like [Vitis vinifera]
Length = 848
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 165/540 (30%), Positives = 252/540 (46%), Gaps = 95/540 (17%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR +Q L+ E+A V+ AV +AR+R H+Q T LHV + +L + LLR AC +Q
Sbjct: 1 MRAGGCTVQQALTAEAAGVVKQAVTLARRRGHAQVTPLHVANTMLAATNGLLRTAC--LQ 58
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKS-------VEFPPISNSLMAAIKRSQAQQRRN 113
S+ S LQ +ALELC VA +RLP+S S + P ISN+L+AA KR+QA QRR
Sbjct: 59 SH--SHPLQCKALELCFNVALNRLPASTSSPMLGPHSQHPSISNALVAAFKRAQAHQRRG 116
Query: 114 PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQ---- 169
I QQ +K++L+ +++ILDDP SRV EAGF S +K + Q
Sbjct: 117 -------SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSL 169
Query: 170 ------PSVTQFPPR---LSLTRCPPIFLYNLTDSFPGRAGLKL--PFGPDDV-DENCRR 217
PSV+ L L++ PP+ G+ G+KL P PD V +E+
Sbjct: 170 EICSQAPSVSSKSKESNLLVLSQSPPM----------GQIGVKLGKPTVPDPVRNEDVMS 219
Query: 218 IGEVLAGRDEKKGKNPLLVGVCANS---ALKGFVESVNGGKVGLFPRQIYGLDVVCVEYE 274
+ E L K+ KN ++VG C + ++G ++ V+ G V P + + ++ +
Sbjct: 220 VIENLMN---KRRKNTVIVGECLATIEGVVRGVMDKVDKGDV---PEALRDVKLISLPL- 272
Query: 275 INEFVGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVS-DSVSTEAAR----- 328
F G + E + K E++S V C G GV++ +LK + S+E R
Sbjct: 273 ---FSFGHHSREEVEQKLGELKSLVKSCVGRGVILYLEDLKWTTDYRASSSEQGRNYYCP 329
Query: 329 --FVVSQLTSLLKSGNGE--KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSS 384
++ +L L+ G GE + WL+G A +++TY + P L+ W L L I SS
Sbjct: 330 VEHMIMELGKLV-CGFGENGRFWLMGIA-TFQTYSRCRTGHPSLETIWSLHPLTIP-ASS 386
Query: 385 LMGSFVPFGGFFSSPPDFKNPVRSKSHY----------STLCYLCTEKLEQEVAALLKLE 434
L S +P F S K S++ T C C+ E E ++
Sbjct: 387 LALSLMPDSQFSS-----KKAGSGTSNWLMLEGGAEKQLTCCADCSANFENEARSI---- 437
Query: 435 SSDSVTDQCLDNLTSSDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHR 494
T C + T+S L K +++D + + +L +KWN C S H+
Sbjct: 438 ----PTSTCNSDSTTSTLPTWLQQYKDENKKLSRNDQDCV--AVRDLCKKWNSICSSAHK 491
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 12/179 (6%)
Query: 678 FDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVG----SNSKRGIWLAFLG 733
+ + TL AL +KV WQ + I I+ + + R G R G S +K W F G
Sbjct: 598 LNAENLNTLCNALEKKVPWQKDIIPDIASTILQCRSGMVRRKGKVKNSETKEETWFFFQG 657
Query: 734 PDKVGKKKIASALAEIVFGNKGKLIHVDVS--SEQRVSQPNSIFDCQNIDFCDCKLRGKV 791
D K+KIA LA +VFG++ + + +S S R + + ++ D C
Sbjct: 658 VDMDAKEKIARELARLVFGSQNNFVSIALSSFSSTRADSTEDLRNKRSRDEQSCS----- 712
Query: 792 LVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
++ + S P+ V ED+++ AD Q + +A G+ T+S G ++S+S I +
Sbjct: 713 YIERFAEAVGSNPHRVFLAEDVEQ-ADYCSQMGIKRATERGRITNSNGEEISLSDAIII 770
>gi|224091889|ref|XP_002309387.1| predicted protein [Populus trichocarpa]
gi|222855363|gb|EEE92910.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 213/426 (50%), Gaps = 57/426 (13%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR ++ +Q L+ E+A VL+ ++ A +R H QTT LHV + LL PS LR+AC +
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEASRRNHGQTTPLHVAAILLGSPSGFLRQACIKSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEF---PPISNSLMAAIKRSQAQQRRN-PDN 116
S P LQ RALELC VA +RLP+++++ PPISN+LMAA+KR+QA QRR P+
Sbjct: 61 PNSSHP-LQCRALELCFSVALERLPTAQNLSPGLDPPISNALMAALKRAQAHQRRGCPEQ 119
Query: 117 YHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFP 176
QQ +KV+L+ +++ILDDP SRV EA F S +K A I+ S+
Sbjct: 120 --------QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK-ATIEQSLNAST 170
Query: 177 PRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCR----RIGEVLAGRDEK---- 228
S + PG + P ++ N R +G+ A R+E+
Sbjct: 171 NSNSAANSG----IGMGFRAPGAVAVPAPVTNRNLYVNPRLQQGSVGQSGAQRNEEVKKV 226
Query: 229 -------KGKNPLLVGVC-ANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVG 280
K +NP+LVG ++ ++ + +VG +P + +V + E
Sbjct: 227 IDILLKSKKRNPVLVGESEPQMVVQEVLKRIENKEVGDWPLK----NVHVIHLEKGFLDK 282
Query: 281 GRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVS-------------TEAA 327
++ +++ L +E+ + GV+++ G+LK LV VS ++
Sbjct: 283 AQIAAKIVELG-GLIETRIRNLDCGGVILDLGDLKWLVEQQVSLTGSGGVQQQQIVSDVG 341
Query: 328 RFVVSQLTSLLKSGNGE----KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKS 383
R V+++ LL K+WLIG A + ETYL+ P ++NDWDLQ +PI ++
Sbjct: 342 RSAVAEMRKLLGRFGEGSGGGKVWLIGTA-TCETYLRCQVYHPSMENDWDLQAVPIAARA 400
Query: 384 SLMGSF 389
L G+F
Sbjct: 401 HLPGTF 406
>gi|15231233|ref|NP_190817.1| heat shock protein-like protein [Arabidopsis thaliana]
gi|4886278|emb|CAB43425.1| putative protein [Arabidopsis thaliana]
gi|44917467|gb|AAS49058.1| At3g52490 [Arabidopsis thaliana]
gi|332645430|gb|AEE78951.1| heat shock protein-like protein [Arabidopsis thaliana]
Length = 815
Score = 166 bits (420), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 165/521 (31%), Positives = 238/521 (45%), Gaps = 81/521 (15%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR Q L+ ++A V+ A+G+AR+R H+Q T LHV S +L P+ LLR AC +Q
Sbjct: 1 MRAGGCTVEQALTADAANVVKQAMGLARRRGHAQVTPLHVASTMLSAPTGLLRTAC--LQ 58
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSK--------SVEFPPISNSLMAAIKRSQAQQRR 112
S+ + LQ RALELC VA +RLP+S + FP ISN+L AA KR+QA QRR
Sbjct: 59 SH--THPLQCRALELCFNVALNRLPTSTGSPMLGVPTSPFPSISNALGAAFKRAQAHQRR 116
Query: 113 NPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSV 172
I QQ +K++++ +++ILDDP SRV EAGF S +K + Q
Sbjct: 117 G-------SIESQQQPILAVKIEVEQLIISILDDPSVSRVMREAGFSSPQVKTKVEQA-- 167
Query: 173 TQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEKKGKN 232
+SL C + S P L P +DV V+ +KK +N
Sbjct: 168 ------VSLEICSK----TTSSSKPKEGKLLTPVRNEDV-------MNVINNLVDKKRRN 210
Query: 233 PLLVGVC---ANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEF-VGGRVNVEMM 288
++VG C + +K +E V+ V P + DV + + F R +VE
Sbjct: 211 FVIVGECLATIDGVVKTVMEKVDKKDV---PEVLK--DVKFITLSFSSFGQPSRADVER- 264
Query: 289 MLKFKEVESAVGRCSGPGVVVNYGELKVLV------------SDSVS-TEAARFVVSQLT 335
K +E+E+ V C G GV++N G+L V +DS E + +L
Sbjct: 265 --KLEELETLVKSCVGKGVILNLGDLNWFVESRTRGSSLYNNNDSYCVVEHMIMEIGKLA 322
Query: 336 SLLKSGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKS-SLMGSFVPFGG 394
L G+ + WL+G A S +TY++ + P L++ W L L I S SL S V
Sbjct: 323 CGLVMGDHGRFWLMGLATS-QTYVRCKSGQPSLESLWCLTTLTIPATSNSLRLSLVSESE 381
Query: 395 F-FSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRI 453
+ ++ S + C C+ K E E A LK SS+S N+T+
Sbjct: 382 LEVKKSENVSLQLQQSSDQLSFCEECSVKFESE-ARFLK--SSNS-------NVTTVALP 431
Query: 454 AALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHR 494
A L K D + I EL KWN C S+H+
Sbjct: 432 AWLQQYKKENQNSHTD-----SDSIKELVVKWNSICDSIHK 467
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Query: 678 FDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNG-RDVGSNS--KRGIWLAFLGP 734
+ + TL AL KV WQ + + +++ V + R G+ R + N K W+ F G
Sbjct: 569 MNAENLATLCAALESKVPWQKDLVPELAKTVLKCRSGSSTRKINGNEDKKEDTWMFFQGL 628
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD 794
D K+KIA LA++VFG++ + + +SS ++ D + +LR + +
Sbjct: 629 DVDAKEKIARELAKLVFGSQDSFVSICLSSFSSTRSDSA------EDLRNKRLRDEQSLS 682
Query: 795 YI--YQEFRS-KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
YI + E S P V+ +ED+++ AD + Q +A+ G+ +S G + S+ I +
Sbjct: 683 YIERFSEAVSLDPNRVILVEDIEQ-ADYLSQVGFKRAVERGRVCNSSGEEASLKDAIVI 740
>gi|357449635|ref|XP_003595094.1| hypothetical protein MTR_2g038200 [Medicago truncatula]
gi|124359320|gb|ABD28470.2| ATP binding , related [Medicago truncatula]
gi|355484142|gb|AES65345.1| hypothetical protein MTR_2g038200 [Medicago truncatula]
Length = 1020
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 230/873 (26%), Positives = 358/873 (41%), Gaps = 199/873 (22%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR+ ++ L+ E+A +L ++G+AR+R H+Q T LHV + LL +PSS LR AC + Q
Sbjct: 1 MRSGAYTLQETLTAEAASILKHSLGLARRRGHAQITPLHVAATLLSLPSSSLRNACLKSQ 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSV------EFPPISNSLMAAIKRSQAQQRRNP 114
+ P LQ RALELC VA +RLP++ + P +SN+L+AA+KR+QA QRR
Sbjct: 61 QQNNHP-LQCRALELCFNVALNRLPTTTTSPLLQPQHVPSLSNALIAALKRAQAHQRRG- 118
Query: 115 DNYHLQQIHCNQQTASLL--KVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSV 172
+ + QQ LL KV+L +L+ILDDP SRV EAGF S +K + S
Sbjct: 119 ----CIEQNQQQQQQPLLSVKVELDQLILSILDDPSVSRVMREAGFSSPSVKNNLENSST 174
Query: 173 TQFPPRLSLTRCPPIFLYNLTDS-------FPGRAGLKLPFGP--DDVDENCRRIGEVLA 223
+ + P+ + S F + ++ + P + N I V
Sbjct: 175 LINSSSVFHSSPSPLSHNHFLSSYGYGSVLFSSQKKEQVVYHPFLKSSESNKEDINLVFD 234
Query: 224 GRDEKKGKNPLLVGVCANSALKGFV-ESVNGGKVGLFPRQI--------YGLDVVCVEYE 274
KK KN ++VG S +G V E + + G P ++ +GL V ++Y
Sbjct: 235 VLLRKKKKNTVIVGDTV-SLTEGLVSEIMKRFERGEVPDEMKTTHFVKFHGLSSVSLKYM 293
Query: 275 INEFVGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVST----EAARFV 330
E VEM +++ + + + G G + G+LK +V D+ + E +V
Sbjct: 294 KKE------EVEMNVIRVLKRKVSDYVALGVGAIFYVGDLKWIVDDNDGSLNEKEVVDYV 347
Query: 331 VSQLTSLL-KSGNGE-KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGS 388
V ++ L + GN K+WL+ A SY++Y++ + P +N W LQ +P
Sbjct: 348 VEEIGKLFGEEGNKNGKIWLVATA-SYQSYMRCQMRVPTFENQWCLQAVP---------- 396
Query: 389 FVPFGGFFSSPPDFKNPVRSKSHYSTLCYLC-------------TEKLEQEVAALLKLES 435
VP GG S S+ H C+L + LE + + +
Sbjct: 397 -VPSGGLGLSLHS------SRRHCEKHCWLVSVHDSKMSISQNPSPMLESKFFSNKEEHE 449
Query: 436 SDSVTDQCLDNLTSSDRIAALDTSKGVGT--------AKAKDDVTALNAKIMELQRKWND 487
+ ++C+ N ++ D + + A+ KD++T LN +KWN
Sbjct: 450 KLNCCEECVSNYEKEAQLFKPDQKNLLPSWLQSHSTEARQKDELTQLN-------KKWNR 502
Query: 488 TCQSLHRTQLVPKLDIRQRSHVQLSEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLS 547
CQ LH+ N P H S
Sbjct: 503 LCQCLHQ-------------------------------------------NKQPQNHW-S 518
Query: 548 QNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSNNDEHLLPPHPLADLYKPHEHTS 607
N SS NA I P NSS N +LP +S
Sbjct: 519 NNHSS---NAKI--------------YPYNSSYPYWPNQGSSILPD----------TSSS 551
Query: 608 FSFLASVTTDLGLGKIYPSTR--QEANTPKLIDNKEQCFSGSISA--EFDAVS--EGTFH 661
SF S T + P R Q++ T + N E+ ++A E D++ EGT
Sbjct: 552 ISFADSATKPAYSSNLIPRFRRGQQSCTIEFNFNDEKAQKNQVTATLELDSLKGMEGT-- 609
Query: 662 NVVQSSSCSAPHTGEPFDPRDYKTLRI-------ALAEKVGWQDEAICTISQAVSRWRIG 714
V+++ T D + + L + L E + W E + +I++A+
Sbjct: 610 KEVKTTLALGNSTFSVSDQKRMENLTLQRDHIYKVLQENIPWHCETVSSIAEALV----- 664
Query: 715 NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNS- 773
D S+ + WL G D VGKK++A A+AE VFG+ HVD+ + P S
Sbjct: 665 ---DSKSSKECATWLFLQGNDSVGKKRLALAIAESVFGSVEMFSHVDMMKRENSETPFSE 721
Query: 774 ------------IFDCQNIDFCDCKLRGKVLVD 794
+ +N DF D +R K+L D
Sbjct: 722 KVVGPLKNNEKFVVLVENADFGDTLIR-KMLAD 753
>gi|51536536|gb|AAU05506.1| At3g52490 [Arabidopsis thaliana]
Length = 837
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 163/538 (30%), Positives = 240/538 (44%), Gaps = 93/538 (17%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR Q L+ ++A V+ A+G+AR+R H+Q T LHV S +L P+ LLR AC +Q
Sbjct: 1 MRAGGCTVEQALTADAANVVKQAMGLARRRGHAQVTPLHVASTMLSAPTGLLRTAC--LQ 58
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSK--------SVEFPPISNSLMAAIKRSQAQQRR 112
S+ + LQ RALELC VA +RLP+S + FP ISN+L AA KR+QA QRR
Sbjct: 59 SH--THPLQCRALELCFNVALNRLPTSTGSPMLGVPTSPFPSISNALGAAFKRAQAHQRR 116
Query: 113 NPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSV 172
I QQ +K++++ +++ILDDP SRV EAGF S +K + Q
Sbjct: 117 G-------SIESQQQPILAVKIEVEQLIISILDDPSVSRVMREAGFSSPQVKTKVEQA-- 167
Query: 173 TQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEKKGKN 232
+SL C + S P L P +DV V+ +KK +N
Sbjct: 168 ------VSLEICSK----TTSSSKPKEGKLLTPVRNEDV-------MNVINNLVDKKRRN 210
Query: 233 PLLVGVC---ANSALKGFVESVNGGKVGLFPRQIYGLDV----------VCVEYEINEFV 279
++VG C + +K +E V+ V + + + + VE ++ E
Sbjct: 211 FVIVGECLATIDGVVKTVMEKVDKKDVPEVLKDVKFITLSFSSFGQPSRADVERKLEEL- 269
Query: 280 GGRVNVEMMM--------LKFKEVESAVGRCSGPGVVVNYGELKVLV------------S 319
+VE + K +E+E+ V C G GV++N G+L V +
Sbjct: 270 --EADVERKLEELEADVERKLEELETLVKSCVGKGVILNLGDLNWFVESRTRGSSLYNNN 327
Query: 320 DSVS-TEAARFVVSQLTSLLKSGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLP 378
DS E + +L L G+ + WL+G A S +TY++ + P L++ W L L
Sbjct: 328 DSYCVVEHMIMEIGKLACGLVMGDHGRFWLMGLATS-QTYVRCKSGQPSLESLWCLTTLT 386
Query: 379 IHWKS-SLMGSFVPFGGF-FSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESS 436
I S SL S V + ++ S + C C+ K E E A LK SS
Sbjct: 387 IPATSNSLRLSLVSESELEVKKSENVSLQLQQSSDQLSFCEECSVKFESE-ARFLK--SS 443
Query: 437 DSVTDQCLDNLTSSDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHR 494
+S N+T+ A L K D + I EL KWN C S+H+
Sbjct: 444 NS-------NVTTVALPAWLQQYKKENQNSHTD-----SDSIKELVVKWNSICDSIHK 489
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Query: 678 FDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNG-RDVGSNS--KRGIWLAFLGP 734
+ + TL AL KV WQ + + +++ V + R G+ R + N K W+ F G
Sbjct: 591 MNAENLATLCAALESKVPWQKDLVPELAKTVLKCRSGSSTRKINGNEDKKEDTWMFFQGL 650
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD 794
D K+KIA LA++VFG++ + + +SS ++ D + +LR + +
Sbjct: 651 DVDAKEKIARELAKLVFGSQDSFVSICLSSFSSTRSDSA------EDLRNKRLRDEQSLS 704
Query: 795 YI--YQEFRS-KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
YI + E S P V+ +ED+++ AD + Q +A+ G+ +S G + S+ I +
Sbjct: 705 YIERFSEAVSLDPNRVILVEDIEQ-ADYLSQVGFKRAVERGRVCNSSGEEASLKDAIVI 762
>gi|357442825|ref|XP_003591690.1| Heat shock protein [Medicago truncatula]
gi|355480738|gb|AES61941.1| Heat shock protein [Medicago truncatula]
Length = 849
Score = 159 bits (402), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 160/531 (30%), Positives = 244/531 (45%), Gaps = 84/531 (15%)
Query: 4 LVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQSYS 63
+ ++ Q L++E+A V+ AV +A +R H+Q T LHV SA+L + +LR+AC + S+
Sbjct: 5 ICSIQLQALTQEAATVVKQAVNLATRRGHAQVTPLHVASAMLATSTGILRKACLQCHSHP 64
Query: 64 VSPKLQFRALELCLGVAFDRLPSSKSVEF--------PPISNSLMAAIKRSQAQQRRNPD 115
LQ +ALELC VA +RLP+S P +SN+L+AA KR+QA QRR
Sbjct: 65 ----LQCKALELCFNVALNRLPASTQSPLLGPQYSTTPSLSNALVAAFKRAQAHQRRG-- 118
Query: 116 NYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQ- 174
QQ QQ LK++++ +++ILDDP SRV EAGF S +K + V Q
Sbjct: 119 TIENQQ----QQHILALKIEVEQLIISILDDPSVSRVMREAGFSSTLVKSRV---EVEQA 171
Query: 175 FPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDE--KKGKN 232
P +S T+ + N + + + G +C +V + E K+ +N
Sbjct: 172 LPIEVSSTKVSSEYHKNQSKELSLKPQVLSLGGSYTKPIDCVNNDDVTSVLSELVKRRRN 231
Query: 233 PLLVGVCANSA---LKGFVESVNGGKVGLFPR--QIYGLDVVCVEYEINEFVGGRVNVEM 287
++VG ++A KG +E G V + R Q L ++C ++ E
Sbjct: 232 TVIVGESVSNAEGVAKGVMERFEIGDVPMELRYVQFVSLPLICFR---------NISKEE 282
Query: 288 MMLKFKEVESAVGRCSGPGVVVNYGELKVLVSD-SVSTEAAR-------FVVSQLTSLLK 339
+ KF EV S V G GV++ G+LK L S E R +V ++ L+
Sbjct: 283 VEKKFVEVRSLVKSYMGRGVILYLGDLKWLFEFWSSYCEQKRNYYCSVEHMVMEIKKLV- 341
Query: 340 SGNGE--KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGSFVPFGGFFS 397
SG+GE +LWL+G A +++TY+K P L+ W+L I +GS F S
Sbjct: 342 SGSGESSRLWLMGIA-NFKTYMKCKISHPSLETIWELHPFTIP-----VGSLSLSLNFDS 395
Query: 398 SPPDFKNPVRSKSHYS--------------TLCYLCTEKLEQEVAALLKLESSDSVTDQC 443
DF+ RS ++ T C C+ K E E +L T+
Sbjct: 396 ---DFQAKERSMVLFNDLTFEDKVGVGKQLTCCRDCSIKFENEALSL---------TNNI 443
Query: 444 LDNLTSSDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHR 494
SS L K + +D NA++ +L +KWN C S+HR
Sbjct: 444 SKKACSSSLPTWLQNCKEERSYTVEDQE---NARLKDLCKKWNSICNSIHR 491
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 8/185 (4%)
Query: 674 TGEPFDPRDYKTLRI---ALAEKVGWQDEAICTISQAVSRWRIG-----NGRDVGSNSKR 725
+ E F+ + + L+I AL K E I I+ V R G N N K+
Sbjct: 599 STELFNEHNEENLKILCDALENKFPQHKEIIQEIASTVLFCRSGMRKRGNNFFKRENHKQ 658
Query: 726 GIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDC 785
W+ FLG D ++ I+ LA++VFG+ + + +S+ + +S D ++
Sbjct: 659 ETWMFFLGDDSQARENISKELAKVVFGSCNNFMTIGMSTFSSLGNDDSSSDEKSKRKRPR 718
Query: 786 KLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSIS 845
G + + P+ V F+EDL++ D Q + KAI G T G V +
Sbjct: 719 AELGSTYLQRFCEAVNENPHRVFFMEDLEEEVDHFTQKGIKKAIECGSITIPGGESVPLK 778
Query: 846 GMIFV 850
I +
Sbjct: 779 DAIVI 783
>gi|356574695|ref|XP_003555481.1| PREDICTED: uncharacterized protein LOC100800986 [Glycine max]
Length = 831
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 148/519 (28%), Positives = 233/519 (44%), Gaps = 79/519 (15%)
Query: 4 LVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQSYS 63
+ ++ Q L+ E+A V+ AV +A +R H+Q T LHV SA+L + LLR+AC + S+
Sbjct: 5 ICSIQLQALTPEAATVVKQAVNLATRRGHAQVTPLHVASAMLATSTGLLRKACLQCHSHP 64
Query: 64 VSPKLQFRALELCLGVAFDRLPSSKSVEF-------PPISNSLMAAIKRSQAQQRRNPDN 116
LQ +ALELC VA +RLP+S S P +SN+L+AA KR+QA QRR
Sbjct: 65 ----LQCKALELCFNVALNRLPASTSSPLLAPQYSTPSLSNALVAAFKRAQAHQRRG--- 117
Query: 117 YHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFP 176
I QQ LK++++ V++ILDDP SRV EAGF S +K + Q
Sbjct: 118 ----SIENQQQHILALKIEVEQLVISILDDPSVSRVMREAGFSSTLVKTRVEQA------ 167
Query: 177 PRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDE-NCRRIGEVLAGRDEKKGKNPLL 235
+S+ C + + + P ++D N + VL+ + K +N ++
Sbjct: 168 --VSMEVC--------SQKAQAKENITKPHHQPNLDHVNNDDVTSVLS--ELAKRRNTVI 215
Query: 236 VGVCANSA---LKGFVESVNGGKV--GLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMML 290
VG +A ++G +E G V L Q L ++C ++ E +
Sbjct: 216 VGESVTNAEGVVRGVIERFEVGNVPGDLRYVQFVSLPLMCFR---------NISKEEVEQ 266
Query: 291 KFKEVESAVGRCSGPGVVVNYGELKVLV-------SDSVSTEAARFVVSQLTSLL-KSGN 342
K EV + V G GVV+ G+LK L + + +V +L L+ SG
Sbjct: 267 KLMEVRNLVKSYVGGGVVLYLGDLKWLFEFWANFREQKTNYCSVEHMVMELKKLVCGSGE 326
Query: 343 GEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQ--LLPIHWKSSLMGSFVPFGG-----F 395
+LWL+G + +++TY+K P L+ W+L +P+ S + F
Sbjct: 327 SSRLWLMGIS-TFKTYMKCKICHPSLETIWELHPFTIPVGILSLSLNLDSDFQAQERNKV 385
Query: 396 FSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAA 455
F F++ ++H T C CT E+E ++ S + T L + +
Sbjct: 386 FFKDVAFEDRAGVRNHL-TCCRDCTINFEKEAQSITSTISKKACTTSSLPTWLQNCKEER 444
Query: 456 LDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHR 494
D + A+ KD L +KWN C S+HR
Sbjct: 445 SDIMEDQENARLKD-----------LCKKWNSLCNSIHR 472
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 13/183 (7%)
Query: 676 EPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG-NGRDVGSNSKRG----IWLA 730
EP + ++K L AL +KV E I I+ V R G RD + KR W+
Sbjct: 580 EP-NAENHKILCDALEKKVPQHKEVIPEIASTVLHCRSGMRKRDQNHSMKREDNQETWMF 638
Query: 731 FLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK 790
FLG + K+ I+ LA++VFG+ + + +SS S P D + + R +
Sbjct: 639 FLGVNSQAKESISRELAKVVFGSYSNFVTIGMSS---FSSPEDDDDSTDEKSKRKRPREE 695
Query: 791 VLVDYIY---QEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
+ Y + P+ V FLEDLD+ D Q + +AI +G T G V +
Sbjct: 696 LKSSYAQRFGEAVNENPHRVFFLEDLDQ-VDYFSQKGVEQAIQSGSITLPGGESVPLMDA 754
Query: 848 IFV 850
I +
Sbjct: 755 IVI 757
>gi|341605679|gb|AEK84225.1| heat shock protein-related protein [Cucurbita maxima]
Length = 782
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 161/526 (30%), Positives = 241/526 (45%), Gaps = 73/526 (13%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLC---VPSSLLREACD 57
MR+ A+Q L+ E+A VL ++ +A +R HS T LHV S LL P +LLR AC
Sbjct: 1 MRSGTCAAQQTLTPEAASVLKHSLSLAARRGHSHVTPLHVASTLLSNNSKPPTLLRRAC- 59
Query: 58 RVQSYSVSPKLQFRALELCLGVAFDRLPSSKSVEFPP--ISNSLMAAIKRSQAQQRRNPD 115
++S+ P LQ RALELC VA +RLPSS + P +SN+L+AA+KR+QA QRR
Sbjct: 60 -LKSHPPHP-LQSRALELCFNVALNRLPSSPPLLHSPPSLSNALIAALKRAQAHQRRGSS 117
Query: 116 NYH--LQQIHCNQQTASLL--KVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPS 171
+ L H QQ LL KV+L++ +++ILDDP SRV EAGF S +K I + +
Sbjct: 118 SSSSSLDHHHQQQQQHPLLTVKVELQHLIISILDDPSVSRVMREAGFSSTAVKTNIEEYN 177
Query: 172 VTQFPPRLSLTRCP-PI---FLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDE 227
P PI F T+S+ P + + + E G++
Sbjct: 178 DNNNNNNTIFISPPSPISSHFFSAQTNSYTPFFFSSSSPPPPPTTDATKLVFEAFLGKNN 237
Query: 228 KKGKNPLLVGVCANSALKGFV-ESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVE 286
+ ++V + +G V E + K+G P + G+ V E + G +
Sbjct: 238 NNLRTNVVVVGDSVGLTEGVVFEVMRKVKMGEVPEAMKGVKFV----EFLPLMKGSSS-- 291
Query: 287 MMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLK------- 339
LK E V GV+V G+LK +V S E R +V ++ LLK
Sbjct: 292 ---LKLGEY---VKDNGDGGVLVYVGDLKWIVEGGNSDEIER-LVGEIERLLKGDFLNAN 344
Query: 340 -SGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGSFVPFGGFFSS 398
+G+ K+W++G A SY+ Y++ + P L+ W L +P+ SS +G + + S
Sbjct: 345 NNGSKAKIWVMGMA-SYQIYMRCQMRQPALETQWSLHAVPV--PSSGLGLTLHTSSVYDS 401
Query: 399 PPDF-------KNPVRSKSHYS-TLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSS 450
P F K + + H T C CT E EV L + S
Sbjct: 402 RPSFFSQTMETKQFIAKEEHEKLTCCAECTSNFENEVQHLKSFQ---------------S 446
Query: 451 DRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQ--SLHR 494
++ + V + +KD+ +EL++KWN C SLHR
Sbjct: 447 KQVPSWLQQYNVNQSHSKDE-------FVELRKKWNRFCSSLSLHR 485
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L E V W E++ +I++ V N KR W+ G D +GK+K+A A+AE
Sbjct: 612 LQENVPWLSESLPSIAETVI--------SAKKNEKRIQWILMEGNDFIGKRKMALAIAES 663
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
VFG+ ++++ SE+ G + + + +S V+
Sbjct: 664 VFGSIEFFLNLNSKSEE---------------------MGISRSEMVEKALKSTRKLVIL 702
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVAT 852
+ED++ AD L +GKF + ++ I +IFV T
Sbjct: 703 VEDVE-MADSQFMKFLEDGFESGKFGEV--KEERIEKLIFVLT 742
>gi|388498144|gb|AFK37138.1| unknown [Lotus japonicus]
Length = 150
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 105/149 (70%), Gaps = 3/149 (2%)
Query: 948 LPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPK 1007
+P +E ++D + ++ ++ ENS AWL DF DQ D VF+P NFD LAE+++ ++ +
Sbjct: 1 MPLEEVDKDNNDSDCENQSMVENSEAWLSDFCDQIDGEVVFKPFNFDSLAEQVIECVETR 60
Query: 1008 FQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYEVRRK---HHFTA 1064
FQR FG E LLEIDYE++ QILAA WLSD+KK++E+WIE+VV RSF E R+K HH A
Sbjct: 61 FQRTFGSEFLLEIDYEVMAQILAAAWLSDKKKSVEDWIEHVVGRSFAEARQKYHHHHPAA 120
Query: 1065 GSVVKLVAHEGLLVEEEASGIRLPKIINV 1093
V+KLV E + VEE+A G+ LP IN+
Sbjct: 121 EYVMKLVNCESIFVEEQALGVCLPARINL 149
>gi|255551163|ref|XP_002516629.1| conserved hypothetical protein [Ricinus communis]
gi|223544231|gb|EEF45753.1| conserved hypothetical protein [Ricinus communis]
Length = 864
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/406 (32%), Positives = 206/406 (50%), Gaps = 46/406 (11%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR + +Q L+ E+A ++ AV +AR+R H+Q T LHV SA+L + LLR AC +Q
Sbjct: 1 MRAGICSVQQALTAEAANIVKQAVSLARRRGHAQVTPLHVASAMLASTNGLLRRAC--LQ 58
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKS-------VEFPPISNSLMAAIKRSQAQQRRN 113
S+ S LQ +ALELC VA +RLP+S S +P +SN+L+AA KR+QA QRR
Sbjct: 59 SH--SHPLQCKALELCFNVALNRLPASTSSALLGPHSSYPSLSNALVAAFKRAQAHQRRG 116
Query: 114 PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVT 173
I QQ LK++++ +++ILDDP SRV EAGF S +K + Q
Sbjct: 117 -------SIENQQQPILALKIEIEQLIISILDDPSVSRVMREAGFSSTQVKNKVEQAVSL 169
Query: 174 QFPPR-LSLTRC-------PPIF-LYNLTDSFP-GRAGLKLPFGPDDVDENCRRIGEVLA 223
+ + + T C P IF N++ S P G+ L P D + + + VL
Sbjct: 170 EICSQGTTATSCQSKEITKPQIFSTNNVSPSLPFSHYGVTLS-KPLDHEVSNDDVMSVLN 228
Query: 224 GRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEY-EINEFVGGR 282
EKK +N ++ G C S +N + GL P ++ + + + +
Sbjct: 229 TLMEKK-RNTIITGECLASTESVVRLVMNKIERGLAPGELRAMRFISFPLISLRDLPQEE 287
Query: 283 VNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSD-SVSTEAAR-------FVVSQL 334
V +++ L+ V+S + R GV + G++K + S E R +++ +L
Sbjct: 288 VEQKLVELRCT-VKSYLNR----GVFLYLGDIKWVAEFWSEYGEQRRSYYCSGEYIIMEL 342
Query: 335 TSLLKS-GNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI 379
L++ G E+LWL+G A +++TY+K + P L+ W+L LPI
Sbjct: 343 KRLIRGIGETERLWLMGVA-TFQTYMKCKSGRPSLETIWELYPLPI 387
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 18/182 (9%)
Query: 678 FDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRG----IWLAFLG 733
+ ++ K L +L +KV WQ + I I+ A+ R G + ++ R WL FLG
Sbjct: 610 LNNQNLKILCSSLEKKVPWQKDIIPEIATAILECRSGRSKSKRKSNNRAEREETWLFFLG 669
Query: 734 PDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLV 793
D GK+KIA LA +V+G++ + + +S+ ++ +S + +N RG+ +
Sbjct: 670 VDSEGKEKIARELARLVYGSQANFVSIGLSNYSS-TRTDSTDESKN-------KRGRDEL 721
Query: 794 DYIYQE-----FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y E P+ V F+ED+++ D Q ++ KAI +GK G + + I
Sbjct: 722 GCGYHERFGLALNENPHRVFFMEDVEQ-VDYCSQKAIKKAIESGKVALPGGENAPLKDAI 780
Query: 849 FV 850
+
Sbjct: 781 II 782
>gi|224113403|ref|XP_002316485.1| predicted protein [Populus trichocarpa]
gi|222865525|gb|EEF02656.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 130/407 (31%), Positives = 203/407 (49%), Gaps = 50/407 (12%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR + +Q L+ E+ ++ AVG+AR+R H+Q T LHV S +L + LLR AC +Q
Sbjct: 1 MRAGICSVQQALTPEAVSLVKQAVGLARRRGHAQVTPLHVASTMLASSTGLLRRAC--LQ 58
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKS-------VEFPPISNSLMAAIKRSQAQQRRN 113
S+ S LQ +ALELC VA +RLP+S S +P +SN+L+AA KR+QA QRR
Sbjct: 59 SH--SHPLQCKALELCFNVALNRLPASTSSALLGPHSSYPSLSNALVAAFKRAQAHQRRG 116
Query: 114 PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVT 173
I QQ LK++++ +++ILDDP SRV EAGF S +K + Q
Sbjct: 117 -------SIENQQQPILALKIEIEQLIISILDDPSVSRVMKEAGFSSTQVKNKVEQTVSL 169
Query: 174 QFPPRLSLT-RC-------PPIFLYNLTDSFP-GRAGLKLPFGPDDV-DENCRRIGEVLA 223
+ P+ SLT C P + +++ S P + G+ D V +++ + L
Sbjct: 170 EICPQSSLTVSCQPKEIIKPQVLSASVSQSLPFSQFGIIHSKPLDQVRNDDVMSVLNTLV 229
Query: 224 GRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYE-INEFVGGR 282
G K +N ++ G C +A ESV G + F R D+ V ++ + F
Sbjct: 230 G----KKRNTIITGECLATA-----ESVVRGVMDKFERGEVSGDLRSVRFKNLPLFSFRS 280
Query: 283 VNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEA---------ARFVVSQ 333
++ E + K E+ V GVV+ G+LK ++D S+ A ++ +
Sbjct: 281 LSKEDLEQKLMELRCIVKSYISTGVVLYLGDLK-WIADFWSSYGEQRRSYYCTADHIILE 339
Query: 334 LTSLLKS-GNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI 379
L L+ +LWL+G A +++TY+K A P L+ W+L + I
Sbjct: 340 LKRLVHGFSETGRLWLMGIA-TFQTYMKCKAGHPSLETMWELNPVTI 385
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 678 FDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGS----NSKRGIWLAFLG 733
F+ K LR L +KV WQ + I I+ + R G + G K WL FLG
Sbjct: 602 FNDYSLKNLRSGLEKKVPWQKDIIPEIATTILECRSGMRKRKGKLNHIEDKAETWLFFLG 661
Query: 734 PDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLV 793
D GK+KIA LA++VFG++ + + +S+ S+ +SI + +N + R ++
Sbjct: 662 VDFEGKEKIARELAKLVFGSQSNFVSIGLSNFSS-SRADSIEESKNK-----RARDELGC 715
Query: 794 DYIYQ---EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
Y+ + P+ V F+ED+D+ D Q + +AI G T G V + I +
Sbjct: 716 SYLERLGLALNENPHRVFFMEDVDQ-VDNCSQKGIKQAIENGNVTLPDGEKVPLKDAIII 774
>gi|15234709|ref|NP_194764.1| heat shock-related protein [Arabidopsis thaliana]
gi|7269935|emb|CAB81028.1| putative protein [Arabidopsis thaliana]
gi|332660355|gb|AEE85755.1| heat shock-related protein [Arabidopsis thaliana]
Length = 924
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 173/555 (31%), Positives = 244/555 (43%), Gaps = 106/555 (19%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR + +Q L+ E+A VL+ ++ A +R H TT LHV + LL S LR+AC +
Sbjct: 1 MRADLITIQQTLTPEAATVLNQSIAEATRRNHGHTTPLHVAATLLSSSSGYLRQACIKSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEF---------------PPISNSLMAAIKR 105
S P LQ RALELC VA +RLP++ + P +SN+L AA+KR
Sbjct: 61 PNSSHP-LQCRALELCFSVALERLPTTSTTTTTTSSSSSSSPSQTQEPLLSNALTAALKR 119
Query: 106 SQAQQRRN-PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIK 164
+QA QRR P+ QQ QQ +KV+L+ +++ILDDP SRV EA F S +K
Sbjct: 120 AQAHQRRGCPE----QQ----QQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVK 171
Query: 165 LA--------------------IIQPSVTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKL 204
A II PS F R N PG G++
Sbjct: 172 SAIEQSLIGNSVSNSRQTGSPGIINPSAIGFGYRSVPAPVNRNLYLNPRLQQPG-VGMQS 230
Query: 205 PFGPDDVDENCRRIGEVLAGRDEKKGKNPLLVGVCANSAL-KGFVESVNGGKVGLFPRQI 263
DE +R+ E++ + +NP+LVG L K +E + G+ +
Sbjct: 231 GMMIQRTDE-AKRVIEIMI---RTRKRNPVLVGDSEPHILVKEILEKIENGEFS--DGAL 284
Query: 264 YGLDVVCVEYEINEFVGGRVNVEMMMLKFKEVESAV-GRCSGPGVVVNYGELKVLVSDSV 322
V+ +E E+ V + + E+ V R G GVV++ G+LK LV
Sbjct: 285 RNFQVIRLEKEL---------VSQLATRLGEISGLVETRIGGGGVVLDLGDLKWLVEHPA 335
Query: 323 STEAARFVVSQLTSLLKSGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWK 382
+ A V ++ LL+ G +L IG A + ETYL+ +P ++NDWDLQ +PI K
Sbjct: 336 ANGGA---VVEMRKLLERYKG-RLCFIGTA-TCETYLRCQVYYPSMENDWDLQAIPIAAK 390
Query: 383 SSLMGSFVPFGG-----------------FFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQ 425
SSL F G S F+ P+ S C C + E
Sbjct: 391 SSLPAIFPRLGSNNNNNAMLLSNNIISIESISPTRSFQIPMSKMS----CCSRCLQSYEN 446
Query: 426 EVAALLKLESSD--SVTDQCLDNLTSSDRIAALDTSKGVGTAKAKDDVTALNAKIMELQR 483
+VA + K + D SV Q L N ++D G K D +I+ELQ+
Sbjct: 447 DVAKVEKDLTGDNRSVLPQWLQNAKANDD----------GDKKLTKD-----QQIVELQK 491
Query: 484 KWNDTCQSLHRTQLV 498
KWND C LH Q V
Sbjct: 492 KWNDLCLRLHPNQSV 506
Score = 137 bits (346), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 198/419 (47%), Gaps = 63/419 (15%)
Query: 675 GEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGP 734
G+ FD +K L LA+ V WQ +A +++ A++ + GNG+ SK IWL F GP
Sbjct: 562 GDSFDIDLFKKLLKGLAKSVWWQHDAASSVAAAITECKHGNGK-----SKGDIWLMFTGP 616
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD 794
D+ GK K+ASAL+++V G++ I + + S R+ D NI RGK +D
Sbjct: 617 DRAGKSKMASALSDLVSGSQP--ITISLGSSSRMD------DGLNI-------RGKTALD 661
Query: 795 YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV--AT 852
+ R P++V+ LED+D+ AD ++++++ AI G+ DSYGR+VS+ +I + A
Sbjct: 662 RFAEAVRRNPFAVIVLEDIDE-ADILLRNNVKIAIERGRICDSYGREVSLGNVIIILTAN 720
Query: 853 STILKGKHSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENS 912
S++ K+ T ++ L K W+++ ++ + S K P S
Sbjct: 721 SSLGSAKNVASIDETRLES-----LVNKGWELRLSVCN--------SSKTRKRKPNWLYS 767
Query: 913 NPESRRKRKRTDDGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSG 972
+ + ++RK DLN EA E SS + E++G
Sbjct: 768 DNDQTKQRKEI-------------------CFDLN----EAAEFDSSSDVTVEHDQEDNG 804
Query: 973 AWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAAT 1032
+ D +F+P++FD + K ++ +F + +EI+ + L +I A
Sbjct: 805 NLVHKLVGLVDDAILFRPVDFDSIKSKTAESLKKRFSNGLADGLTVEIEDDALERIAGAI 864
Query: 1033 WLSDRKKAIENWIENVVLRSFYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIRLPKII 1091
WLS K ++E W+E + S V+ + + SV+++ + L + SG LP I
Sbjct: 865 WLS--KISLEEWLEEAMGSSLNSVKSRVSSSEDSVIRIELEDDL--NDRISGGYLPSSI 919
>gi|224091901|ref|XP_002309392.1| predicted protein [Populus trichocarpa]
gi|222855368|gb|EEE92915.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 152 bits (385), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 164/542 (30%), Positives = 244/542 (45%), Gaps = 92/542 (16%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR +Q L+ ++A V+ AV +AR+R H+Q T LHV + +L + L R AC +Q
Sbjct: 1 MRAGGCTVQQALTADAASVIKQAVTLARRRGHAQVTPLHVANTMLSASTGLFRTAC--LQ 58
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSV--------EFPPISNSLMAAIKRSQAQQRR 112
S+ S LQ +ALELC VA +RLP+S S +FP ISN+L+AA KR+QA QRR
Sbjct: 59 SH--SHPLQCKALELCFNVALNRLPASTSSPILGTHSQQFPSISNALVAAFKRAQAHQRR 116
Query: 113 NPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQ--- 169
I QQ +K++L+ +++ILDDP SRV EAGF S +K + Q
Sbjct: 117 G-------SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVS 169
Query: 170 --------PSVTQFPPR---LSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRI 218
PSV+ L L++ P + +A + P +DV C
Sbjct: 170 LEICSQSAPSVSSKSKESNGLVLSQSPT------SSQVGAKATVLDPIKNEDV--MC--- 218
Query: 219 GEVLAGRDEKKGKNPLLVGVCANS---ALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEI 275
V+ K+ ++ ++VG S +KG ++ V G V R++ L + +
Sbjct: 219 --VIENLVNKRRRSFVIVGESLASIEVVVKGVIDKVQKGDVPEALREVKFLTIPVSSF-- 274
Query: 276 NEFVGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSD---SVSTEAAR---- 328
F RV VE K +E++ V G GVV+N G+LK + + S S+E R
Sbjct: 275 GHF--SRVEVEH---KLEELKIHVRSYMGKGVVLNLGDLKWAIENRASSSSSEQGRCFFC 329
Query: 329 ---FVVSQLTSLLKSGNGE----KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHW 381
+++ +L L G GE + WL+G A +++TY+K + P L L I
Sbjct: 330 PMEYMIIELGK-LACGIGENINGRFWLMGIA-TFQTYMKCKSGHPSGGTVLGLHPLTIP- 386
Query: 382 KSSLMGSFVPFGGFFSSPPDFKNPVRSKS---HYS------TLCYLCTEKLEQEVAALLK 432
SL S + K S S H T C C+ K E E +
Sbjct: 387 AGSLRLSLISDSDLRCQSTRNKAGNGSSSWILHEGGEDKQLTCCADCSAKFESEARSF-- 444
Query: 433 LESSDSVTDQCLDNLTSSDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSL 492
T C + T+S A L K + D+ +++ K +L RKWN C S+
Sbjct: 445 ------PTSTCDSDSTTSGLPAWLQQCKNEKNLQNSDNQNSMSIK--DLCRKWNSFCSSI 496
Query: 493 HR 494
HR
Sbjct: 497 HR 498
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 14/185 (7%)
Query: 673 HTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG----NGRDVGSNSKRGIW 728
H + + + K L IAL +KV WQ + I I+ + + R G G+ S SK W
Sbjct: 581 HKFKELNAENLKILSIALEKKVPWQRDIIPEIASTILQCRSGMIRRKGKMKNSESKEETW 640
Query: 729 LAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLR 788
L F G D K+KIA LA +VFG+ S ++ +S DC+N + R
Sbjct: 641 LFFQGVDVEAKEKIAKELARLVFGSNDSF-ISVSLSSFSSTRADSTEDCRNK-----RSR 694
Query: 789 GKVLVDYI--YQEFRS-KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSIS 845
+ YI + E S P V +ED+++ AD Q +AI +G+ T+S G++V +S
Sbjct: 695 DEQSCSYIERFSEAASNNPRRVFLVEDVEQ-ADYCSQIGFKRAIESGRITNSNGQEVGLS 753
Query: 846 GMIFV 850
I +
Sbjct: 754 DAIII 758
>gi|297735465|emb|CBI17905.3| unnamed protein product [Vitis vinifera]
Length = 974
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 161/549 (29%), Positives = 242/549 (44%), Gaps = 107/549 (19%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR +Q L+ E+A VL ++ +AR+R H+Q T LHV + LL +SLLR AC + Q
Sbjct: 1 MRAGACTLQQTLTTEAASVLKHSLSLARRRGHAQVTPLHVAATLLSSRASLLRRACLKSQ 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEF---PPISNSLMAAIKRSQAQQRRNPDNY 117
+ LQ RALELC VA +RLP++ P +SN+L+AA+KR+QA QRR
Sbjct: 61 PNQSTHPLQCRALELCFNVALNRLPTTPGPLLHGQPSLSNALIAALKRAQAHQRRG--CI 118
Query: 118 HLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPP 177
QQ QQ +KV+L+ +++ILDDP SRV EAGF S +K + S +
Sbjct: 119 EQQQ----QQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKNNLEDSSAS---- 170
Query: 178 RLSLTRC-----PPIFLYNLTDSFPGRAGLKLPFGPD------------DVDENCRRIGE 220
S+ +C P F ++ L F P V E+ + + E
Sbjct: 171 --SVFQCYNIINPSTFWQTHILAYSSEQN-PLLFSPQKKLSSNPITDSTSVKEDLKLVLE 227
Query: 221 VLAGRDEKKGKNPLLVGVCANSALKGFVESVNGG-KVGLFPRQIYGLDVVCVEYE-INEF 278
VL KK +N ++VG S +G V + G + G P ++ V ++ +
Sbjct: 228 VLL---RKKRRNTVIVGDSV-STTEGLVAELMGRIERGEVPEELKSAHFVKFQFSPVTLR 283
Query: 279 VGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAARF--------- 329
R VEM + K ++ G G ++ G+LK V +VS F
Sbjct: 284 FMKREEVEMNLSDLKRKVDSLASGGGGGAIIYAGDLKWTVEAAVSDRDGGFPNGEASAYN 343
Query: 330 ----VVSQLTSLLK--SGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKS 383
+V+++ LL + + ++WL+ A SY+TY++ K P L+ W LQ +
Sbjct: 344 PIDHLVAEIGRLLSDYTTSNTRVWLMATA-SYQTYMRCQMKQPSLEIQWALQAVS----- 397
Query: 384 SLMGSFVPFGGF-----FSSPPDFKN-----------PVRSKSHYSTL--CYLCTEKLEQ 425
VP GG SS D ++ P +K + L C CT E+
Sbjct: 398 ------VPSGGLGLSLHASSVHDSRSQNQAHHVLETKPFAAKEEHDKLSCCAECTANYEK 451
Query: 426 EVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKW 485
EV L + + + GV A+ KDD ++EL+RKW
Sbjct: 452 EVG---------------LFKSGQQKLLPSWLQAHGV-EARQKDD-------LVELRRKW 488
Query: 486 NDTCQSLHR 494
N C SLH+
Sbjct: 489 NRLCHSLHQ 497
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 35/175 (20%)
Query: 684 KTLRIA-----LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVG 738
KT+R+ L E V WQ EAI I++A+ +SK+ WL G D +G
Sbjct: 602 KTIRLRDICKLLEENVPWQSEAISPIAEALID---------SKSSKKETWLLLQGNDSIG 652
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K+++A A+AE VFG+ + +++ N + C I + +
Sbjct: 653 KRRLAHAIAESVFGSADLVFRMNMRKLD-----NGVTPCSEI---------------LTE 692
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
R+ VV +ED+D A+P L TG+F DS R+ S IF+ T+
Sbjct: 693 ALRAHQKLVVMVEDVD-FAEPQFMKFLADGCETGEFRDSSKREGSFGQAIFILTT 746
>gi|255556741|ref|XP_002519404.1| conserved hypothetical protein [Ricinus communis]
gi|223541471|gb|EEF43021.1| conserved hypothetical protein [Ricinus communis]
Length = 1008
Score = 147 bits (371), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 153/547 (27%), Positives = 238/547 (43%), Gaps = 95/547 (17%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR+ +Q L+ E+A VL ++ +AR+R H+Q T LHV + LL +SLLR AC + Q
Sbjct: 1 MRSGACTVQQTLTAEAASVLKHSLSLARRRGHAQVTPLHVAATLLSSRASLLRRACLKSQ 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEF---PPISNSLMAAIKRSQAQQRRNPDNY 117
+ S LQ RALELC VA +RLP++ P +SN+L+AA+KR+QA QRR
Sbjct: 61 PHQNSHPLQCRALELCFNVALNRLPTTPGPLLHGQPSLSNALIAALKRAQAHQRRGC--I 118
Query: 118 HLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQF-- 175
QQ QQ +KV+L+ +++ILDDP SRV EAGF S +K I S +
Sbjct: 119 EQQQ----QQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTSVKSNIEDSSASSVFQ 174
Query: 176 --------------PPRLSLTRCPPIFLYNLTDSFPGRAGLKLP--FGPD---------- 209
P P + F + K P F P
Sbjct: 175 CYTTSGGVFSSPSSPGETHREIINPTSFWQT--HFLSYSAEKNPLLFSPQKKLSTNYFTD 232
Query: 210 ---DVDENCRRIGEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGG-KVGLFPRQIYG 265
V E+ + + EV KK KN ++VG S +G V + G + G P ++
Sbjct: 233 SSASVKEDIKLVFEVFL---RKKKKNTVIVGDRV-SITEGLVGELMGRVERGEVPAELKQ 288
Query: 266 LDVVCVEYE-INEFVGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSV-- 322
+ V ++ ++ + +VEM + + K ++G GV++ G+LK V +S
Sbjct: 289 IQFVKFQFAPVSLRFMKKEDVEMNITQLKRKVDSIG---DSGVIIYTGDLKWTVEESAIN 345
Query: 323 -STEAARFVVSQLTSLLK--SGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQL--- 376
+V++ LL S + ++WL+ A +Y+TY++ + P L+ +W LQ
Sbjct: 346 GEYSPVDHLVAETGRLLSDYSCSNARVWLMATA-NYQTYMRCQMRQPSLEIEWALQAVSV 404
Query: 377 ------LPIHWKSSLMGSFVPFG----GFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQE 426
L +H SS+ S + F + P N + + T C C E+E
Sbjct: 405 PSGGLGLSLH-GSSIHESRMTFNQNPSQVLETKPLISNS-KDEQDKLTCCPECISSYEKE 462
Query: 427 VAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWN 486
L ++ + + +G T ++ EL+RKWN
Sbjct: 463 AQVLKSVQQKN---------------LPPWLNPRGTTTNDMNEEA--------ELRRKWN 499
Query: 487 DTCQSLH 493
CQ LH
Sbjct: 500 GLCQGLH 506
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 60/280 (21%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L + V WQ E I +I++A+ + ++++G WL G D VGK+ +A +AE
Sbjct: 633 LQDNVPWQSEIIHSIAEALFESK---------SNRKGTWLLIQGNDIVGKRILALTIAES 683
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
V G+ L+++++ + P S + I + FRS+ V
Sbjct: 684 VLGSADSLLYINMKRRDNEAVPYS--------------------EMITRAFRSQERLVAL 723
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVAT--STILKGKHSVHPQTT 867
+ED+D +D + L +GKF G ++ IF+ T S + +H Q +
Sbjct: 724 VEDID-FSDTHLLKFLADGFESGKF----GESGNLGQAIFILTRGSDFMGYEHGKTNQNS 778
Query: 868 PVKFSEEIILGAKRWQMQTAI-SHGFADAARGSGMNVKVTPRKENSNPESRRKRKRTDDG 926
++ + E+ QT + S G + R RK + RRK R+++
Sbjct: 779 VIRMTLEV--------KQTKLDSFGTPNTDR---------KRKAERDISGRRKAPRSEEK 821
Query: 927 DSPINSQKQVD-----DSFRSYLDLNLPADEAEEDTSSEK 961
+ N + D SF + LDLN+ A+E +++ EK
Sbjct: 822 EDAENGSSKKDCFSRQTSFNT-LDLNIKANEEDDEHGEEK 860
>gi|356533304|ref|XP_003535205.1| PREDICTED: uncharacterized protein LOC100811773 [Glycine max]
Length = 836
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 247/534 (46%), Gaps = 105/534 (19%)
Query: 4 LVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQSYS 63
+ ++ Q L+ E+A ++ AV +A +R H+Q T LH+ + +L + LLR+AC + S+
Sbjct: 5 VCSIQLQALTSEAATLVKQAVTLATRRGHAQVTPLHIATVMLATSTGLLRKACLQCHSHP 64
Query: 64 VSPKLQFRALELCLGVAFDRLPSS------------KSVEFPPISNSLMAAIKRSQAQQR 111
LQ++ALELC V+ +RLP+S + P +SN+L+AA KR+QA QR
Sbjct: 65 ----LQYKALELCFNVSLNRLPASTPNPLLISPPYNSTTTTPSLSNALVAAFKRAQAHQR 120
Query: 112 RNPDNYHLQQIHCNQQTASL-LKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQP 170
R I NQQ L LK+ ++ +++ILDDP SRV EAGF S +K + Q
Sbjct: 121 RG-------SIDQNQQQPILTLKIKVEQLIVSILDDPSISRVMREAGFSSSLVKTRVEQA 173
Query: 171 SVTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEKKG 230
+ + + ++ +L DDV + E+++ R
Sbjct: 174 VSME-------------LVCSQQQAYSKENTTELQVLGDDVTS---VLSELVSKR----- 212
Query: 231 KNPLLVGVCANS---ALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEM 287
+N ++VG S ++G +E++ G V R + + + V + G+ VE
Sbjct: 213 RNTVIVGESLASPEGIVRGLIENLERGSVQGELRFVQFVSLPLVSFR----NIGKKEVER 268
Query: 288 MMLKFKE-VESAVGRCSGPGVVVNYGELKVLVSDSVSTEAAR--------FVVSQLTSLL 338
+++ + V+S VGR G ++ G+LK L S R +V +L L+
Sbjct: 269 KLVELRNLVKSHVGR----GFILYLGDLKWLFEFWSSYCEQRTNYYCSVVHIVMELKKLI 324
Query: 339 KSGNGE--KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGSFVPFGGFF 396
SGNGE +LWL+G A ++ TY+K A P L+ WDL L + ++ S + G F
Sbjct: 325 -SGNGENGRLWLMGIA-TFGTYMKGQACHPSLETIWDLHLFTV----PVLLSSLRLGLTF 378
Query: 397 SSPPDFKNPVRSK--------------SHYSTLCYLCTEKLEQEVAALLKLESSDSVT-- 440
S DF+ RSK Y T C + E+E + +++S+T
Sbjct: 379 DS--DFQVQERSKVTFKDESFEERAKVRKYLTCCRDFSLNFEKEAKS-----TTNSITIS 431
Query: 441 -DQCLDNLTSSDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLH 493
C NL + + + S+ + + NAK+ ++ +KWN C S H
Sbjct: 432 KRDCTTNLPTWLQNCKEERSRIMENQE--------NAKLRDICKKWNSFCSSAH 477
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 84/204 (41%), Gaps = 25/204 (12%)
Query: 682 DYKTLRIALAEKVGWQDEAICTISQAV----SRWRIGNGRDVGSNSKRGIWLAFLGPDKV 737
+ K L AL +KV Q E + I+ V S R G V + ++ IW FLG D
Sbjct: 593 NLKILCDALLKKVSQQKEIVKEIASTVLLCRSGMREGVNHLVKRDDRQEIWFFFLGLDSQ 652
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSS------EQRVSQPNSIFDCQNIDFCDCKLRGKV 791
K+ ++ LA++VFG+ + + +SS E + +P F G
Sbjct: 653 AKEMVSKELAKVVFGSYSNFVSIGISSFSSTHEESKNKRPRDEF-------------GGS 699
Query: 792 LVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVA 851
+ + P+ V FLEDL++ D + + K I +G T G V + I +
Sbjct: 700 YLQRFGEALNENPHRVFFLEDLEQ-VDHFSKKGVKKGIESGTITLPGGESVPLKDAIVIF 758
Query: 852 TSTILKG-KHSVHPQTTPVKFSEE 874
+S + P T FS+E
Sbjct: 759 SSESFSSVPRACSPARTTSPFSDE 782
>gi|356564815|ref|XP_003550643.1| PREDICTED: chaperone protein ClpB1-like [Glycine max]
Length = 1010
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 158/580 (27%), Positives = 248/580 (42%), Gaps = 129/580 (22%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR+ V +Q L+ E+A VL ++G+AR+R H+Q T LHV + LL + S LR AC +
Sbjct: 1 MRSGVCTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRGSSLRRACLKSS 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEF---PPISNSLMAAIKRSQAQQRRNPDNY 117
S P LQ RALELC VA +RLP++ S P +SN+L+AA+KR+QA QRR
Sbjct: 61 QASHHP-LQCRALELCFNVALNRLPTTPSPLIHTQPSLSNALIAALKRAQAHQRRGC--I 117
Query: 118 HLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFP- 176
QQ QQ +KV+L++ +++ILDDP SRV EAGF S +K I + Q+
Sbjct: 118 EQQQ----QQPLLTIKVELEHLIISILDDPSVSRVMREAGFSSTAVKNHIEDSNSPQYSV 173
Query: 177 ------------------------PRLSLTRCPPIFLYNLT----DSFPGRAGLKLPFGP 208
R + T P + T S+ L F P
Sbjct: 174 FQCYNSSGGVFSSPCSPSASENNNHRETATNNNPTNFRHTTRHFLTSYASEFHPSLVFSP 233
Query: 209 ---------------DDVDENCRRIGEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNG 253
D++ R + ++L KK KN ++VG S +G V + G
Sbjct: 234 PKNAPVCSITGAASSSSKDDDVRLVLDILL---RKKKKNTVIVGDSL-SLTEGLVGEIMG 289
Query: 254 -----------GKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKFKEVESAVGRC 302
+ QI + + C++ R VEM +L+ + +++
Sbjct: 290 RLERSEVPDELKSIHFIKFQISHVSLSCMK---------RDEVEMKLLELERKVNSIASG 340
Query: 303 SGPGVVVNYGELKVLVSDSVSTEAAR--------------FVVSQLTSLL---KSGNGEK 345
G G+ G+LK V ++ +E +VS++ L + N K
Sbjct: 341 GGGGIFY-IGDLKWTVEEASLSEKEEGSPNGEVSGYNPVDHLVSEIGKLFCDCGTSNNAK 399
Query: 346 LWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGSFVPFGGFFSS--PPDFK 403
+WL+ A SY+TY++ + P L+ W LQ +P VP GG S P
Sbjct: 400 VWLMATA-SYQTYMRCQMRQPPLEKQWALQAVP-----------VPSGGLGLSLHAPSVL 447
Query: 404 NPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVG 463
+ + SH ++ LE + ++ E + ++C N + D K +
Sbjct: 448 DSKMTISHNQ------SQVLETKPFGNMEQEDKLNCCEECASNYEKEAQFIRPDQKKRLP 501
Query: 464 -------TAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQ 496
T K D ++++L+RKWN C LH+++
Sbjct: 502 FWLQSHITEDHKKD------ELVQLKRKWNRLCHCLHQSK 535
Score = 46.2 bits (108), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 20/118 (16%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L E V WQ E +I++A+ + S WL G D +GK+++A A+AE
Sbjct: 639 LQENVPWQSETFPSIAEALIDSK------SAKESNNITWLLMQGNDTIGKRRLALAIAES 692
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNS-------------IFDCQNIDFCDCKLRGKVLVD 794
VFG+ L+ D+ + P S + +N+DF D + + K L D
Sbjct: 693 VFGSTNLLLQFDMLKRETSIAPFSEMLEGALKTHHQLVMLIENVDFADAQFK-KFLCD 749
>gi|147865471|emb|CAN83664.1| hypothetical protein VITISV_031478 [Vitis vinifera]
Length = 828
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 157/542 (28%), Positives = 236/542 (43%), Gaps = 119/542 (21%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR +Q L+ E+A V+ AV +AR+R H+Q T LHV + +L + LLR AC +Q
Sbjct: 1 MRAGGCTVQQALTAEAAGVVKQAVTLARRRGHAQVTPLHVANTMLAATNGLLRTAC--LQ 58
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKS-------VEFPPISNSLMAAIKRSQAQQRRN 113
S+ S LQ +ALELC VA +RLP+S S + P ISN+L+AA KR+QA QRR
Sbjct: 59 SH--SHPLQCKALELCFNVALNRLPASTSSPMLGPHSQHPSISNALVAAFKRAQAHQRRG 116
Query: 114 PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQ---- 169
I QQ +K++L+ +++ILDDP SRV EAGF S +K + Q
Sbjct: 117 -------SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQAVSL 169
Query: 170 ------PSVTQFPPR---LSLTRCPPIFLYNLTDSFPGRAGLKL--PFGPDDVDENCRRI 218
PSV+ L L++ PP+ G+ G+KL P PD V R
Sbjct: 170 EICSQAPSVSSKSKESNLLVLSQSPPM----------GQIGVKLGKPTVPDPV-----RN 214
Query: 219 GEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEF 278
+V+ +++G ++ V+ G V R DV + +
Sbjct: 215 EDVM--------------------SVRGVMDKVDKGDVPEALR-----DVKLISLPPSSD 249
Query: 279 VGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVS-DSVSTEAAR-------FV 330
+ K E++S V C G GV++ +LK + S+E R +
Sbjct: 250 FWTSLQRRGPNRKLGELKSLVKSCVGRGVILYLEDLKWTTDYRASSSEQGRNYYCPVEHM 309
Query: 331 VSQLTSLLKSGNGE--KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGS 388
+ +L L+ G GE + WL+G A +++TY + P L+ W L L I SSL S
Sbjct: 310 IMELGKLV-CGFGENGRFWLMGIA-TFQTYSRCRTGHPSLETIWSLHPLTIP-ASSLALS 366
Query: 389 FVPFGGFFSSPPDFKNPVRSKSHYS----------------TLCYLCTEKLEQEVAALLK 432
+P D ++ SK S T C C+ E E ++
Sbjct: 367 LMP-------DSDLQSQFSSKKAGSGTSNWLMLEGGAEKQLTCCADCSANFENEARSI-- 417
Query: 433 LESSDSVTDQCLDNLTSSDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSL 492
T C + T+S L K +++D + + +L +KWN C S
Sbjct: 418 ------PTSTCNSDSTTSTLPTWLQQYKDENKKLSRNDQDCV--AVRDLCKKWNSICSSA 469
Query: 493 HR 494
H+
Sbjct: 470 HK 471
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 12/179 (6%)
Query: 678 FDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVG----SNSKRGIWLAFLG 733
+ + TL AL +KV WQ + I I+ + + R G R G S +K W F G
Sbjct: 578 LNAENLNTLCNALEKKVPWQKDIIPDIASTILQCRSGMVRRKGKVKNSETKEETWFFFQG 637
Query: 734 PDKVGKKKIASALAEIVFGNKGKLIHVDVS--SEQRVSQPNSIFDCQNIDFCDCKLRGKV 791
D K+KIA LA +VFG++ + + +S S R + + ++ D C
Sbjct: 638 VDMDAKEKIARELARLVFGSQNNFVSIALSSFSSTRADSTEDLRNKRSRDEQSCS----- 692
Query: 792 LVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
++ + S P+ V ED+++ AD Q + +A G+ T+S G ++S+S I +
Sbjct: 693 YIERFAEAVGSNPHRVFLAEDVEQ-ADYCSQMGIKRATERGRITNSNGEEISLSDAIII 750
>gi|449463567|ref|XP_004149505.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222907 [Cucumis sativus]
Length = 774
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 173/536 (32%), Positives = 245/536 (45%), Gaps = 95/536 (17%)
Query: 1 MRTLVTL--ARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCV-PS--SLLREA 55
MR++ T ++Q L+ E+A VL ++ +A +R HS T LHV S LL PS SL R A
Sbjct: 1 MRSVTTCVSSQQTLTPEAASVLKHSLSLAARRGHSHVTPLHVASTLLSSKPSTLSLFRRA 60
Query: 56 CDRVQSYSVSPKLQFRALELCLGVAFDRLPSSKS--VEFPPISNSLMAAIKRSQAQQRRN 113
C ++S+ P LQ RALELC VA +RLP+S + P +SN+L+AA+KR+QA QRR
Sbjct: 61 C--LKSHPPHP-LQSRALELCFNVALNRLPTSSPPLLHSPSLSNALIAALKRAQAHQRRG 117
Query: 114 PDNYHLQQIHCNQQTASL-LKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPS- 171
L H QQ L +KV+L++ V++ILDDP SRV EAGF S +K I + S
Sbjct: 118 SS---LDHQHQQQQHPLLTIKVELQHLVISILDDPSVSRVMREAGFSSTAVKNNIEEYSS 174
Query: 172 -VTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRR-IGEVLAGRDEKK 229
+ + T P+F FPG EN + + EV G +K
Sbjct: 175 NIITTSTATTQTTTTPLFF------FPGSGS-------SSGSENASKFVFEVFLGM--RK 219
Query: 230 GKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMM 289
KN +LVG +S+ +E + K+G P ++ G V VE+ E +
Sbjct: 220 RKNVVLVG---DSSEGVVLEVMRKFKMGEVPEEMKG--VKFVEFVPYNNNNNSNVSEFLR 274
Query: 290 LKFKEVESAVGRCSGPGVVVNYGELKVLVS-DSVSTEAARFVVSQLTSLLKSG------- 341
K +E G GVVV G+LK +V S S +V ++ LL G
Sbjct: 275 RKLEENYDHTENNEG-GVVVYVGDLKWIVERGSCSNFGVDGLVGEIERLLLEGFHYNDRN 333
Query: 342 -----NGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLP---------IHWKSSLMG 387
K+W+ G A SY+ Y++ + P L+ WDL LP +H SS+
Sbjct: 334 NLNIKKKIKIWVXGVA-SYQIYMRCQMRLPSLETQWDLHALPLPSSGLALALH-SSSVYD 391
Query: 388 SFVPFGGFFSSPPDFKNPVRSKSHYSTL--CYLCTEKLEQEVAALLKLESSDSVTDQCLD 445
S + FFS + K + K + L C CT + E LL L+S S Q
Sbjct: 392 SRL---SFFSQSMETKPFIIGKEEHQNLTCCEECTSNFQNE---LLHLKSFHS--KQLPS 443
Query: 446 NLTSSDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKL 501
L S + +++EL+RKWN C +LHR V L
Sbjct: 444 WLQSPPK-----------------------EELVELKRKWNKLCNTLHRDNSVQSL 476
Score = 48.1 bits (113), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 32/164 (19%)
Query: 689 ALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAE 748
L E V W+ E I I++AV I +D K W+ G D +GK+K+ +AE
Sbjct: 592 VLEENVPWRSELIPCIAEAV----ISMKKD----DKLIQWVLMEGNDFIGKRKMGIVIAE 643
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
++FG+ L+ ++ SE+ + C++ K L + +E VV
Sbjct: 644 LLFGSVDFLLDLNAKSEE-------------MGISKCEMLEKAL--KLNKEL------VV 682
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVAT 852
+ED++ AD + L A GKF D ++ ++ +IF+ T
Sbjct: 683 LVEDVE-MADSQLMKLLENAFHNGKFEDM--KEETVQKVIFILT 723
>gi|356550720|ref|XP_003543732.1| PREDICTED: uncharacterized protein LOC100814376 [Glycine max]
Length = 1008
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 153/568 (26%), Positives = 242/568 (42%), Gaps = 107/568 (18%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR+ V +Q L+ E+A VL ++G+AR+R H+Q T LHV + LL + S LR AC + Q
Sbjct: 1 MRSGVCALQQTLTAEAASVLKHSLGLARRRGHAQLTPLHVAATLLSLRGSSLRRACLKSQ 60
Query: 61 SYSVSPK-LQFRALELCLGVAFDRLPSSKSVEF---PPISNSLMAAIKRSQAQQRRNPDN 116
+ S LQ RALELC VA +RL ++ S P +SN+L+AA+KR+QA QRR
Sbjct: 61 PHQTSHHPLQCRALELCFNVALNRLQTTPSPLIHTQPSLSNALIAALKRAQAHQRRGCIE 120
Query: 117 YHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAI--------- 167
H QQ +KV+L++ +++ILDDP SRV EAGF S +K I
Sbjct: 121 ------HQQQQPLLTIKVELEHLIISILDDPSVSRVMREAGFSSTAVKNNIEDSSPHSVF 174
Query: 168 -------------IQPSVTQFPPRLSLTRCPPIFL---YNLTDSFPGRAGLKLPFGPDDV 211
PS ++ P F + LT L F P
Sbjct: 175 QCYNSSGGVFSSPCSPSASENNNHRETATNPTNFRHPHHYLTSYASSEFHPSLLFSPPKN 234
Query: 212 DEN-CRRIGEVLAGRDE----------KKGKNPLLVGVCANSALKGFVESVNGG-KVGLF 259
+ C G + +D+ KK KN ++VG S +G V + G +
Sbjct: 235 NSPVCSITGAASSSKDDVRLVLDILLRKKKKNTVIVGDSL-SLTEGLVAELMGRLERSEV 293
Query: 260 PRQIYGLDVVCVEYEINEF-VGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLV 318
P ++ + + + R VEM +L+ K ++ G G + G+LK V
Sbjct: 294 PDELKSTHFIKFQISHDSLSCMKRDEVEMKLLELKRKVESIASGGGGGGIFYIGDLKWTV 353
Query: 319 SDSVSTEAAR--------------FVVSQLTSLLK---SGNGEKLWLIGAAMSYETYLKM 361
++ +E +VS++ L + N K+WL+ A SY+TY++
Sbjct: 354 KEASFSEKEEGSPNGEVSGYNPVDHLVSEIGKLFSDCGTSNNAKVWLMATA-SYQTYMRC 412
Query: 362 LAKFPGLDNDWDLQLLPIHWKSSLMGSFVPFGGF---FSSPPDFKNPV---RSKSHYSTL 415
+ P L+ W LQ +PI P GG +P + + ++SH
Sbjct: 413 QMRQPPLEKQWALQAVPI-----------PSGGLGLSLHAPSVLHSKMIVSHNQSHVP-- 459
Query: 416 CYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGV-------GTAKAK 468
E ++ E+ + ++C N + D K + T +K
Sbjct: 460 --------ETNPFGNMEQENKLNCCEECASNYEKEAQFLRPDQKKMLPLWLQSHSTEDSK 511
Query: 469 DDVTALNAKIMELQRKWNDTCQSLHRTQ 496
D ++++L+RKWN C LH+++
Sbjct: 512 KD------ELVQLKRKWNRLCHCLHQSK 533
Score = 48.1 bits (113), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 20/118 (16%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L E V WQ E + +I++A + + + N+ WL G D +GK+++A A+AE
Sbjct: 637 LQENVPWQSETVPSIAEA-----LIDSKSAKQNNNI-TWLLVQGNDTIGKRRLALAIAES 690
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNS-------------IFDCQNIDFCDCKLRGKVLVD 794
VFG+ L+H D+ + P S + +N+DF D + + K L D
Sbjct: 691 VFGSTDVLLHFDMLKRETSIAPFSEMLEGALKTHHQLVILIENVDFADAQFK-KFLSD 747
>gi|413922132|gb|AFW62064.1| hypothetical protein ZEAMMB73_199434 [Zea mays]
Length = 1028
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 165/564 (29%), Positives = 249/564 (44%), Gaps = 102/564 (18%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR ++ +Q L+ E+A L A+ A +RRH QTT LHV +ALL P+ LLR+AC R
Sbjct: 1 MRADLSTIQQTLTPEAAAALARAIDEAARRRHGQTTPLHVAAALLAAPAGLLRQACARAA 60
Query: 61 SYSVSPK----------LQFRALELCLGVAFDRLPSSKSVEF------PPISNSLMAAIK 104
+ P LQ RALELC VA DRLP++ + PP+SN+L+AA+K
Sbjct: 61 ATGAGPGAAGGAGGAHPLQCRALELCFSVALDRLPAAAAASAAAHASGPPVSNALVAALK 120
Query: 105 RSQAQQRRN-PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDI 163
R+QAQQRR P+ QQ +KV+L+ VL+ILDDP SRV EA F S +
Sbjct: 121 RAQAQQRRGCPE--------AAQQPLLAVKVELEQLVLSILDDPSVSRVMREASFSSAAV 172
Query: 164 KLAIIQ--PSVTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPF---GPDDVDENCR-- 216
K I Q PS P ++ P + P PF GP + N R
Sbjct: 173 KTTIEQSLPS----PSAAAVVSTPTVAATTPVAPSPS------PFPRVGPTNAYINPRLA 222
Query: 217 ----------RIGEVLAGRDEKKGKNPLLVG-VCANSALKGFVESVNGGKVGLFPRQIYG 265
+ +VL + +NP+LVG ++ L+ V + + G
Sbjct: 223 AAAGVGGGRDDVRKVLDVMLKPARRNPVLVGDAGPDAVLREAVRRIPTSDS----HALAG 278
Query: 266 LDVVCVEYEINEFVGGRVNVEMMMLKFKEVESAVGR--CSGPGVVVNYGELKVLVSD--S 321
V+ +E ++ + G + M + ++ + V R VV++ G+LK LV +
Sbjct: 279 AKVLPLEADLAKLAGDKA---AMAARIGDLGAMVQRILADHGAVVLDLGDLKWLVDGPAA 335
Query: 322 VSTEAARFVVSQLTSLLKSGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHW 381
++E + VVS++ LL K+W +G A + TYL+ P ++ DWDLQ +PI
Sbjct: 336 AASEGGKAVVSEMARLLGPFGSRKVWAVGTA-ACATYLRCKVYHPTMEADWDLQAVPIAR 394
Query: 382 KSSLMGSFVPFGGFF-----------------SSPPDFKNPVRSKSHY-----STLCYLC 419
+ L G+ + GG +P + P + S + +C LC
Sbjct: 395 SAPLAGAALRPGGIGILGNSVGMLSPALRPMPVTPTALRWPPGAGSDHPLKAKPAMCLLC 454
Query: 420 TEKLEQEVAALL-----KLESSDSVTDQCLDNLTSSDRIAALDTSKGVGTAKAKDDVTAL 474
++E+A LL K SS L + R + K+
Sbjct: 455 KGSYDRELAKLLAEQKEKPASSPEAAKPGLPHWMQPSR----------DQPQTKEQELKQ 504
Query: 475 NAKIMELQRKWNDTCQSLHRTQLV 498
N EL++KW++TC H + V
Sbjct: 505 NEAAEELEKKWHETCARTHSNRTV 528
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 128/535 (23%), Positives = 217/535 (40%), Gaps = 95/535 (17%)
Query: 556 NATIPLSSEANNVNFQSRLPINSSTKPQSNNDEHLLPPHPLADLYKPHEHTSFSFL---- 611
N T+ + R P+ +P S +P + +K E T S L
Sbjct: 525 NRTVAPALSLPLAALAPRPPVEPKLQPASGG----VPTLKMNTNWKEPEGTPTSELRKSP 580
Query: 612 --ASVTTDLGLGKIYPSTRQEANTPKLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSC 669
+ V TDL LG + P E D KE G A+ + +
Sbjct: 581 PGSPVKTDLALGPLDPDATMEK------DQKENYTEG-----LTAMQKAKIAGI------ 623
Query: 670 SAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWL 729
D +K L AL EKV WQ +A I+ AV + R +G+ ++ IWL
Sbjct: 624 --------SDIESFKRLLKALTEKVSWQSDAASAIAAAVIQCRTASGKRRNIGTRGDIWL 675
Query: 730 AFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSS---EQRVSQPNSIFDCQNIDFCDCK 786
F+GPD+ GK+K+A+AL+E + + +I+ S + +PN F
Sbjct: 676 LFVGPDQAGKRKMANALSEQMVNAEPVVINFGGDSRWGKDGNGRPNPGF----------- 724
Query: 787 LRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISG 846
GK +D + + R P SV+ LE +D+ D +V+ + +A+ TG+ DS GR+VS+
Sbjct: 725 -WGKTSLDRVTEAVRQNPCSVIVLEGIDQ-VDAVVRGKINRAMDTGRLPDSRGREVSLGN 782
Query: 847 MIFVATSTILKGKHSVHPQTTPVKFSEEIILGAKR-WQMQTAISHGFADAARGSGMNVKV 905
+IFV T+ L + TP++ +++ A WQ++ +I
Sbjct: 783 VIFVLTTDWLPEELRRPKFDTPLQDEGKMLEAAHSDWQLELSIG---------------- 826
Query: 906 TPRKENSNPESRRKRKRTD---DGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKF 962
+ ++ + + D + P +++ LDLNL A A +DT +
Sbjct: 827 ---------DKQQLKHQADWLCNDARPAKVARELSGGHGLSLDLNL-AVGASDDTEGSRN 876
Query: 963 DSDTICE------------NSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQR 1010
SD E ++ A D + D VF+P++F + + + KF
Sbjct: 877 SSDLSVEQEQEKGHVAVKCSTPAPDSDLLNLVDDAIVFRPVDFAPFRKAVTDCVSAKFDS 936
Query: 1011 AFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIENVVLRSFYEVRRKHHFTAG 1065
+D + + ++ A+ WL+D K +E+W E V+ S + R +G
Sbjct: 937 VTRGSSSFRVDEDAVDRMAASVWLTDEK--LEDWAEEVLTPSIERLWRNVKRCSG 989
>gi|242066778|ref|XP_002454678.1| hypothetical protein SORBIDRAFT_04g035490 [Sorghum bicolor]
gi|241934509|gb|EES07654.1| hypothetical protein SORBIDRAFT_04g035490 [Sorghum bicolor]
Length = 955
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 154/520 (29%), Positives = 225/520 (43%), Gaps = 121/520 (23%)
Query: 32 HSQTTSLHVVSALLCVPSSLLREACDRVQSYSVSPKLQFRALELCLGVAFDRLPSSKSVE 91
H+ TT LH +ALL P+ LLR+AC + L+ RAL+LC VA DRLP+S ++
Sbjct: 40 HAHTTPLHAAAALLSGPAPLLRDAC--AAGLASPHPLRCRALDLCFSVALDRLPTSTELQ 97
Query: 92 F-----------PPISNSLMAAIKRSQAQQRRNPDNYHLQQIHCNQQTASLLKVDLKYFV 140
PP+SN+L AA+KR+ A RR I A +V + + V
Sbjct: 98 HHHDGAFHAAAAPPLSNALAAALKRAYAHHRR---------IGSGGVEADDHRVGVPHLV 148
Query: 141 LAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRLSLTRCPPIFLYNLTDSFPGRA 200
LAILDDP +RV EA F S +K A+ L +L+D
Sbjct: 149 LAILDDPSVARVMREASFSSTAVKAAM---------------------LRSLSD------ 181
Query: 201 GLKLPFGPDDVDENCRRIGEVLA--GRDE---------KKGK--NPLLVGVCANSALKGF 247
P PD R+ A GR+E K+GK NP+LVG +
Sbjct: 182 ----PAAPDAGAFVSARVMHRQASHGREEEVAKVVEVLKRGKKRNPVLVGDTVD------ 231
Query: 248 VESVNGGKVGLFPRQIYG-LDVVCVEYEINEFVGGRVNVEMMMLKFKEV-ESAVGRCSGP 305
V++V + L RQ G V+ E + V ++ + K KE+ E+ S
Sbjct: 232 VDAVVQEVITLIQRQRLGNARVISFPKEFGDPVD--MDRAQLTAKIKELGETVRSASSSA 289
Query: 306 GVVVNYGELKVLVSDSVST--------------EAARFVVSQLTSLLK-SGNGE-KLWLI 349
GVVVN G L+ LV + ++ + AR V ++ +L SG GE ++W+I
Sbjct: 290 GVVVNLGNLQWLVEEKCASHQGEQQEKRRDVVLDTARAAVDEMARVLNLSGEGEHRVWVI 349
Query: 350 GAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKS--------SLMGSFVPFGGFFSSPPD 401
G A + TY+K PGL+++WDLQ +PI + L S G SS +
Sbjct: 350 GTA-TCATYMKCQVYHPGLESEWDLQAVPITPRPPPPPPPPLGLSPSVGANRGILSSSVE 408
Query: 402 FKNPVRSKS---HYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLD-----NLTSSDRI 453
+ + S +LC C E E+E A + E + +Q + SS R
Sbjct: 409 VLSTAMTSSPMQRAPSLCSACIEGYERERAEMASSERAPCPAEQPMSLWLQIGTPSSGRP 468
Query: 454 AALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLH 493
A D ++ KA++ + EL+R+W D C LH
Sbjct: 469 APADRAQ----EKARE--------VDELRRRWRDRCAQLH 496
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 15/173 (8%)
Query: 682 DYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKK 741
D K L L E V WQ EA ++ +++ R G R G + W+ F GPD GK+
Sbjct: 553 DDKLLVRRLTEAVRWQPEAAAAVACTIAKARSGVARRRG-KADVDAWVVFAGPDVAGKRS 611
Query: 742 IASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC-QNIDFCDCKLRGKVLVDYIYQEF 800
+A AL++ VFG + R+S P + D +++ C RG+ +D + +
Sbjct: 612 MAEALSKSVFGTGAVTV--------RLSWPQAGDDGGESVVSC----RGQTALDRMAEAI 659
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
R+ P+ VV L+ +D A D +V+ S+ +AI +G+ +DS+GRDV++ IFV S
Sbjct: 660 RANPFRVVVLDGVDHA-DSVVRGSILRAIESGRLSDSHGRDVALGTNIFVVMS 711
>gi|356533866|ref|XP_003535479.1| PREDICTED: chaperone protein ClpB1-like [Glycine max]
Length = 835
Score = 143 bits (361), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 229/518 (44%), Gaps = 76/518 (14%)
Query: 4 LVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQSYS 63
+ ++ Q L+ E+ V+ AV +A +R H+Q T LHV SA+L + LLR+AC + S+
Sbjct: 5 ICSIQLQALTPEATTVVKQAVNLATRRGHAQVTPLHVASAMLATSTGLLRKACLQCHSHP 64
Query: 64 VSPKLQFRALELCLGVAFDRLPSSKSVEF-------PPISNSLMAAIKRSQAQQRRNPDN 116
LQ +ALELC VA +RLP+S S P +SN+L+AA KR+QA QRR
Sbjct: 65 ----LQCKALELCFNVALNRLPASTSSPLLAPQYSTPSLSNALVAAFKRAQAHQRRG--- 117
Query: 117 YHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFP 176
I QQ LK++++ V++ILDDP SRV EAGF S +K + Q
Sbjct: 118 ----SIENQQQHILALKIEVEQLVISILDDPSVSRVMREAGFSSTLVKTRVEQA------ 167
Query: 177 PRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEKKGKNPLLV 236
+S+ C +D G + +K + D+ + E++ + KN ++V
Sbjct: 168 --VSMEVCSQ---KASSDRIAGGSFMKPNLDHVNNDDVTSVLSELV------RRKNTVIV 216
Query: 237 GVCANSALKGFVESVNGGKVGLFPR-----QIYGLDVVCVEYEINEFVGGRVNVEMMMLK 291
G +A E + +VG P Q L ++C ++ E + K
Sbjct: 217 GEGVANAEGVAREVMERFEVGNVPGDLRYVQFVSLPLMCFR---------NISKEEVEQK 267
Query: 292 FKEVESAVGRCSGPGVVVNYGELKVLVSDSVS-TEAAR---FVVSQLTSLLK-----SGN 342
E+ + V G GVV+ G+LK L + E R + Q+ LK SG
Sbjct: 268 LMEIRNLVKSYVGRGVVLYLGDLKWLFEFWANFCEQKRNYYCSIEQMVMELKKLVCGSGE 327
Query: 343 GEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGSFVPFGGFFSSPPDF 402
+LWL+G A +++ Y+K P L+ W+L I +GS F S DF
Sbjct: 328 SSRLWLMGIA-TFKAYMKCKICHPSLEAIWELHPFTIP-----VGSLSLSLNFHS---DF 378
Query: 403 KNPVRSKSHYSTLCYLCTEKLEQEVA----ALLKLESSDSVTDQCLDN--LTSSDRIAAL 456
+ RSK + + + + + L+ E C+ T+S L
Sbjct: 379 QAQERSKVFFKDVAFEDRTGVRNHLTCCRDCLINFEKEAQSITNCISKKVCTASSLPTWL 438
Query: 457 DTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHR 494
K + +D + +++ L +KWN C S+HR
Sbjct: 439 QNCKEERSDIMEDQES---SRLEYLCKKWNSLCNSIHR 473
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 18/186 (9%)
Query: 676 EPFDPRDYKTLRIALAEKVGWQDEAIC-TISQAVSRWRIGNGRDVGSN------SKRGIW 728
EP + ++K L AL +K+ + I I+ V R G R G N + W
Sbjct: 586 EP-NAENHKILCDALEKKIPQHKDVIVPEIASTVLHCRSG-MRKRGLNHLMNREENQETW 643
Query: 729 LAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLR 788
+ FLG + K+ I+ LA++VFG+ + + +S+ S P D + + R
Sbjct: 644 MFFLGVNSQAKESISRELAKVVFGSYSNFVSIGMSN---FSSPEDDHDSTDEKSKRKRPR 700
Query: 789 GKVLVDYIYQEF----RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSI 844
++ Y+ Q F P+ V FLEDLD+ D Q + +AI +G T G V +
Sbjct: 701 EELKSSYV-QRFGEAVNENPHRVFFLEDLDQ-VDYFSQKGVKQAIQSGSITLPSGESVPL 758
Query: 845 SGMIFV 850
I +
Sbjct: 759 KDAIVI 764
>gi|242078685|ref|XP_002444111.1| hypothetical protein SORBIDRAFT_07g008090 [Sorghum bicolor]
gi|241940461|gb|EES13606.1| hypothetical protein SORBIDRAFT_07g008090 [Sorghum bicolor]
Length = 1051
Score = 143 bits (360), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 201/892 (22%), Positives = 349/892 (39%), Gaps = 196/892 (21%)
Query: 231 KNPLLVG-VCANSALKGFVESVN-GGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMM 288
+NP+LVG ++ LK V + G L G V+ +E ++ + + M
Sbjct: 279 RNPVLVGDAGPDAVLKEVVRRIPMAGSPAL-----AGAKVLPLEGDLAKLA---CDKAAM 330
Query: 289 MLKFKEVESAVGR--CSGPGVVVNYGELKVLVSD--SVSTEAARFVVSQLTSLLKSGNGE 344
+ ++ ++V R VV++ G+LK LV + ++EA + VVS++ LL+
Sbjct: 331 AARIGDLGASVQRLLADHGAVVLDLGDLKWLVDGPAAAASEAGKAVVSEMARLLRRFGSG 390
Query: 345 KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGSFVPFGG---------- 394
K+W +G A + TYL+ P ++ +WDLQ +PI + L G+ + GG
Sbjct: 391 KVWAVGTA-ACATYLRCKVYHPTMEAEWDLQAVPIARSAPLAGAGLRSGGTGILGNSVGM 449
Query: 395 -------FFSSPPDFKNPVRSKSHYS-----TLCYLCTEKLEQEVAALL--KLESSDSVT 440
+P + P + S + T+C LC ++E+A L + E S
Sbjct: 450 LSPTLRPMPLTPTALRWPPGAGSDHPLMAKPTMCMLCKGSYDRELAKLAAEQKEKPTSCP 509
Query: 441 DQCLDNLTSSDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPK 500
+ L + ++ T K K+ EL++KW +TC H
Sbjct: 510 EAVKPGLPHWMQPSSDQTQTKEQELKRKEAAE-------ELEKKWRETCACTH------- 555
Query: 501 LDIRQRSHVQLSEFVRLMANRKGSSSKYPSLCESQCTNPSPGAHMLSQNISSAEQNATIP 560
NR G+ + ++P
Sbjct: 556 ------------------GNRAGAPA------------------------------VSLP 567
Query: 561 LSSEANNVNFQSRLPINSSTKPQSNNDEHLLPPH--PLADLYKPHEHTSFSFLASVTTDL 618
L++ A+ + +L + P + P P ++L K + V TDL
Sbjct: 568 LAALASRPPVEPKLQLARGGVPTLKMNTSWDKPEGTPTSELRKSPPGSP------VKTDL 621
Query: 619 GLGKIYPSTRQEANTPKLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPF 678
LG + P E D KE G A+ + +
Sbjct: 622 ALGPLDPGATVEK------DQKENYTEG-----LTAMQKAKIAGI--------------S 656
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVG 738
D +K L L EKV WQ +A I+ V + R G+G+ ++ IWL F+GPD+ G
Sbjct: 657 DIESFKRLLKVLTEKVSWQSDAASAIAAVVIQCRTGSGKRRNIGTRGDIWLLFVGPDQAG 716
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K+K+A+AL+E++ + + ++ + R+ + N F GK +D + +
Sbjct: 717 KRKMANALSELMV--NAQPVVINFGGDSRLGKDG------NAGFW-----GKTSLDRVTE 763
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R P SV+ LE +D+ D +V+ + +A+ TG+ DS GR+VS+ ++FV T+ L
Sbjct: 764 AVRQNPCSVIVLEGIDQ-VDVVVRGKIKRAMETGRLPDSRGREVSLGNVVFVLTTNWLP- 821
Query: 859 KHSVHPQTTPVKFSEEII--LGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPES 916
+ P+ + E + + + WQ++ +I
Sbjct: 822 EELRRPKFETLLQDEGRMFEVASSNWQLELSIG--------------------------D 855
Query: 917 RRKRKRTD---DGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGA 973
++ + R D D P K++ LDLNL A A +DT + SD E
Sbjct: 856 KQIKHRADWLCDDARPAKVAKELSGGPGLSLDLNL-AVGALDDTEGSRNSSDLSVEQDQE 914
Query: 974 WLE------------DFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLLEID 1021
D + D VF+P++F + + I KF ID
Sbjct: 915 KGHLAVKCSTPDPDCDLLNLVDDAIVFRPVDFAPFRKTVTDCISAKFDSVIRSSNSFRID 974
Query: 1022 YEILVQILAATWLSDRKKAIENWIENVVLRSFYEVRRK-HHFTAGSVVKLVA 1072
+ + + + WL+D K +E+W E V++ S + R H++ +VV+L A
Sbjct: 975 EDAVDHMAGSIWLTDEK--LEDWAEKVLMPSIERLWRNVKHYSGRAVVRLAA 1024
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 108/193 (55%), Gaps = 24/193 (12%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR ++ +Q L+ E+A L A+ A +RRH QTT LHV +ALL P+ LLR+AC R
Sbjct: 1 MRADLSTIQQTLTPEAAAALARAIDEAARRRHGQTTPLHVAAALLAAPAGLLRQACARAA 60
Query: 61 SYSVSPK----------LQFRALELCLGVAFDRLPSSKSVEF-----PPISNSLMAAIKR 105
+ P L RALELC VA DRLP++ S PP+SN+L+AA+KR
Sbjct: 61 AAGAGPGAGGGAGGAHPLPCRALELCFSVALDRLPAAASAAVAHAAGPPVSNALVAALKR 120
Query: 106 SQAQQRRN-PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIK 164
+QAQQRR P+ QQ +KV+L+ VL+ILDDP SRV EA F S +K
Sbjct: 121 AQAQQRRGCPE--------AAQQPLLAVKVELEQLVLSILDDPSVSRVMREASFSSAAVK 172
Query: 165 LAIIQPSVTQFPP 177
I Q + PP
Sbjct: 173 TTIEQSLASPSPP 185
>gi|255583564|ref|XP_002532538.1| conserved hypothetical protein [Ricinus communis]
gi|223527727|gb|EEF29832.1| conserved hypothetical protein [Ricinus communis]
Length = 882
Score = 142 bits (359), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 130/421 (30%), Positives = 198/421 (47%), Gaps = 76/421 (18%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR +Q L+ E+A V+ AV +AR+R H+Q T LHV + +L + LLR AC +Q
Sbjct: 1 MRAGGCTVQQALTTEAATVVKQAVTLARRRGHAQVTPLHVANTMLSSSTGLLRTAC--LQ 58
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSV--------EFPPISNSLMAAIKRSQAQQRR 112
S+ S LQ +ALELC VA +RLP+S S ++P ISN+L+AA KR+QA QRR
Sbjct: 59 SH--SHPLQCKALELCFNVALNRLPASTSSPVLGTHAQQYPSISNALVAAFKRAQAHQRR 116
Query: 113 NPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSV 172
I QQ +K++L+ +++ILDDP SRV EAGF S +K + Q
Sbjct: 117 G-------SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSTQVKSNVEQA-- 167
Query: 173 TQFPPRLSLTRC----PPIFLYNLTDSFPGRAGLKL-----------------------P 205
+SL C P+ +S + L L P
Sbjct: 168 ------VSLEICSQNSAPVSSSKSKESNNNNSVLALSHTQVGARTSCRSSPTTSTTSLDP 221
Query: 206 FGPDDVDENCRRIGEVLAGRDEKKGKNPLLVGVCANS---ALKGFVESVNGGKVGLFPRQ 262
+DV V+ K+ ++ ++VG C S +KG ++ V G V P
Sbjct: 222 IRKEDV-------MSVIENLINKRKRSVVIVGECLVSLEGVVKGVMDKVIKGDV---PEA 271
Query: 263 IYGLDVVCVEYEINEFVGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLV---S 319
+ + + + RV V+ K +E++ + GVV+N G+LK +V +
Sbjct: 272 LKEVKFISFPLSSLGHLSSRVEVDQ---KLEELKVHIRSYLSKGVVLNLGDLKWVVEYRA 328
Query: 320 DSVS-TEAARFVVSQLTSLLKSGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLP 378
+++S E + +L S + NG K WL G A +++TY+K + P L+ W L L
Sbjct: 329 NNLSPMEHMIMEIGKLASGISENNG-KFWLTGIA-TFQTYMKCKSGNPSLETVWGLHALT 386
Query: 379 I 379
I
Sbjct: 387 I 387
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 678 FDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVG--------SNSKRGIWL 729
+ + K L AL +KV WQ + I I+ + + R G R G +K WL
Sbjct: 617 MNAENLKILCNALEKKVTWQKDIIPDIASTILQCRSGMVRRKGKVTRNSSTEQAKEETWL 676
Query: 730 AFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRG 789
F G D K+KIA LA+++FG++ I S ++ +S DC+N + R
Sbjct: 677 LFQGVDVEAKEKIAKELAKLIFGSQNNFI-SISLSSFSSTRADSTEDCRNK-----RSRD 730
Query: 790 KVLVDYI---YQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISG 846
+ YI + S P+ V +ED+++ AD Q +AI G+ T+ G +V +S
Sbjct: 731 EQSCSYIERFAEAVSSNPHRVFLVEDVEQ-ADYCSQVGFKRAIERGRITNVKGEEVGLSD 789
Query: 847 MIFV 850
I +
Sbjct: 790 AIII 793
>gi|168026262|ref|XP_001765651.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683077|gb|EDQ69490.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1118
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 202/453 (44%), Gaps = 55/453 (12%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVG 738
DP K L L ++V WQ A+ I+ V + R G G G+ +K WL LGPD V
Sbjct: 675 DP-TLKGLYKGLMQRVPWQAAAVAGIATTVMKCRSGMGSFRGATAKTDTWLLLLGPDPVA 733
Query: 739 KKKIASALAEIVFGNKGKLIHVDVS--SEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYI 796
K IA ALAE+VFG + L+H+ + S R+ +S + RGK +D +
Sbjct: 734 KVAIAKALAEMVFGGERSLLHIGFADGSPARLEGDDS----------GMRYRGKTPLDRL 783
Query: 797 YQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTIL 856
+ R KP SV+ LED+DKA + ++++ +A+ GK DS R+VS+S I V T+++
Sbjct: 784 AEAVRLKPSSVILLEDIDKATS-VFKNNVVRAMERGKLADSSMREVSLSNSIIVMTTSV- 841
Query: 857 KGKHSVHP--QTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNP 914
G P + + FSE + KR ++ I H ++ N K+
Sbjct: 842 -GSVDCEPVERLGALSFSEAKLAALKRAEICVRIKHSSSEKIVFKSANNKIVVVDHGEEE 900
Query: 915 ESRRKRKRTDDGDSPINSQKQVDDSF-----RSY---------------LDLNLPADEAE 954
+ + + + P+ K+ DSF RS LDLNL E +
Sbjct: 901 QKKFVETTSSPLEVPLWVTKRKQDSFLQGELRSKFDAKRTKSGQGRFLNLDLNLSTGENK 960
Query: 955 ------------EDTSSEKFDSDTICENSGAWLEDFFDQTDAIAV-FQPLNFDLLAEKIL 1001
D +E+ + E+ L D F AV F P +F+ LA +IL
Sbjct: 961 GCWTGETDDHCVTDFDAEEVKRKKVLEHVRLMLTDKFCALPDYAVGFDPYDFNGLATEIL 1020
Query: 1002 REIQPKFQRAFGFEVLLEIDYEILVQILAATW-LSDRKKAIENWIENVVLRSFYEVRRKH 1060
+ F+ E +E+D +L +++ W + D ++ W+++V +S
Sbjct: 1021 NTLSKSFEDHSPSEAGVEVDLRLLEYLMSCVWKIPDGRQKFNAWVDDVFSKSISRSLVDI 1080
Query: 1061 HFTAGSVVKLVAHEGLLVEEEA-SGIRLPKIIN 1092
G VV+L+A GL V ++A G+ LP IN
Sbjct: 1081 STAGGPVVELIA--GLSVVKDAFEGVALPHSIN 1111
Score = 47.4 bits (111), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 164/447 (36%), Gaps = 76/447 (17%)
Query: 231 KNPLLVG--VCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMM 288
KN +LVG AN+ + G V P Q+ GL ++ + ++ G + M
Sbjct: 148 KNVILVGDITAANAVNSDLALRIKNGNV---PAQLQGLQIL--DPLLSSSSFGYCSSLEM 202
Query: 289 MLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEA------ARFVVSQLTSLLKSGN 342
K E+ VG C G +++ G+L+ L + A+ S+L LL
Sbjct: 203 DQKLAELSKIVGECMPAGAILHIGDLQWLAEPMQLKKGPSNFCPAQRTASELRQLLIRHA 262
Query: 343 GEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLP-------------------IHWKS 383
+LW +G A + +T+ ++ +P L DW LQ +P +H
Sbjct: 263 SSRLWFVGVA-TPQTFSRLQVLYPSLIADWGLQPVPLSIGSQPDFLSRLTNCTRVVHDLH 321
Query: 384 SLMGSFVPFGGFFSSPPDFKNPVRSKSHYS-----TLCYLCTEKLEQEVAALLKLESSDS 438
SL + P S R S+ C C K E+E + + ES
Sbjct: 322 SLHST--PSASVESPRVTLMQDTRPVSNSGPNERFQCCVECLAKFEEERRLIHEHESLSL 379
Query: 439 VTDQCLDNLTSSDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLH----- 493
+L+ + A+ G K+ V ++M+L+ KW C+ LH
Sbjct: 380 -------HLSLTGDEASFGVVNGGTGQVGKESVV---QQLMQLREKWQKNCRMLHGDSSQ 429
Query: 494 ------RTQL-VPKLDIRQRSHVQLSEFVRLMAN--RKGSSSKYPSLCESQCTNPSPGAH 544
R QL P + SH+ L + L + + S S+ P +
Sbjct: 430 SVGAQSRPQLPSPFSRMTASSHINLPKSCGLGVDVSSRWSGPGNRSVTSPAVVQPIRASP 489
Query: 545 MLSQNISSAEQNATIPL-----SSEANNVNFQSRLPINSSTKPQSNNDEHLLPPHPLADL 599
+ + N +A Q A PL + +A ++ L N S D + P D
Sbjct: 490 LFTMN--AARQGAISPLQRMVQAQDAASLGADKILEANGGPDTGSPKDGSSVASAP-DDH 546
Query: 600 YKPHEHTSFSF----LASVTTDLGLGK 622
PH T S LA++ T+L LG+
Sbjct: 547 EDPHTSTGTSAQNASLANIHTNLALGR 573
>gi|449457275|ref|XP_004146374.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101213124 [Cucumis sativus]
Length = 1009
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 205/450 (45%), Gaps = 73/450 (16%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSS-LLREACDRV 59
MR+ A Q + E+A VL ++ +AR+R H+Q T LHV L SS LLR+AC +
Sbjct: 1 MRSGGCAANQTFTPEAASVLKQSLSLARRRGHAQLTPLHVAVTLFSSRSSNLLRQACLKS 60
Query: 60 QSYSVSPKLQFRALELCLGVAFDRLPSSKSVEF---PPISNSLMAAIKRSQAQQRRNPDN 116
Q + S L RALELC VA +RLP++ F P +SN+L+AA+KR+QA QRR
Sbjct: 61 QPHQTSHPLHCRALELCFNVALNRLPTTPGPLFHGQPSLSNALIAALKRAQANQRRG--- 117
Query: 117 YHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQ-- 174
C Q + +KV+L+ +++ILDDP SRV EAGF S +K + SV+
Sbjct: 118 -------CXQPVLA-IKVELEQLIISILDDPSVSRVMREAGFSSTLVKSNLEDSSVSSVF 169
Query: 175 ---------FPPRLSLTRCP------PIFLYNLTD----SFPGRAGLK--LPFGPDDVDE 213
F S +R ++N D F R+ + LPF P
Sbjct: 170 HCYGSSGGIFSSPSSPSRTDHHSDQRDNLIFNPGDFWQTQFLTRSSEQNPLPFSPQKRVP 229
Query: 214 NCRRIGE-----------VLAGRDEKKGKNPLLVGVCANSALKGFVESVNGGKV-GLFPR 261
N I E V +K KN +++G + ++G + + G G P
Sbjct: 230 NTNVIAESASSLKLDIKLVFEAMLGRKRKNTVIIGDSI-TMIEGLISELMGRVARGEVPN 288
Query: 262 QIYGLDVVCVEYEINEFVG-GRVNVEMMMLKFKE-VESAVGRCSGPGVVVNYGELKVLVS 319
++ + + R ++EM + + + ++S R G G ++ G+LK +V
Sbjct: 289 ELKSTKFIEFLLSPDSLSSMKREDIEMKVAELRRNIDSITSR--GWGAIIYTGDLKWMVE 346
Query: 320 DSVSTEAAR---------------FVVSQLTSLLK--SGNGEKLWLIGAAMSYETYLKML 362
V ++ +++ L+ S + KLWL+G A SY+TY++
Sbjct: 347 TDVREREETSFSSSKEASSYSQIDHMIEEISRLISFHSISCTKLWLVGTA-SYQTYMRCQ 405
Query: 363 AKFPGLDNDWDLQLLPIHWKSSLMGSFVPF 392
+ P L+ WDLQ +P+ SL S F
Sbjct: 406 MRHPTLETRWDLQAVPVPSDGSLGLSLHSF 435
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 121/294 (41%), Gaps = 69/294 (23%)
Query: 689 ALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAE 748
+LAE V WQ + I +I++A+ ++ S ++ W+ G DK+GK+++A A+AE
Sbjct: 633 SLAENVPWQSDTIPSIAKALMSFK--------SKNEELFWILIEGNDKIGKRRLARAIAE 684
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG+ +L ++ + P+ I + +++ VV
Sbjct: 685 SIFGSVEQLCKINARGNNEENPPSKI---------------------VENAMKTQEKLVV 723
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKH---SVHPQ 865
+ED+D+ DP L +GKF +D IF+ TS G S+ P
Sbjct: 724 LVEDIDQ-GDPQFMKFLADGFQSGKFGGMDEKDRDTRQFIFILTSGGEGGDKETDSIIPM 782
Query: 866 TTPVKFSEEIILGAKRWQMQTAISHGFA----DAAR----GSGMNVK----VTPRKENSN 913
T M AI+ GF D R S +N K + +E++N
Sbjct: 783 T-----------------MNIAINTGFGALSLDQKRRAEWESPINTKHQRTIKEEEEDAN 825
Query: 914 PESRRKRKRTDDGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTI 967
P + +G ++ Q + LDLNL A+E EE + EK + D I
Sbjct: 826 PNTNTIDAVKINGSGSLSRQSSFNK-----LDLNLKAEEDEE--AQEKTEDDNI 872
>gi|193870826|gb|ACF23000.1| heat shock-like protein [Arabidopsis thaliana]
Length = 1017
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 162/574 (28%), Positives = 236/574 (41%), Gaps = 117/574 (20%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVP-SSLLREACDRV 59
MRT A Q L+ E+A VL ++ +AR+R HSQ T LHV S LL S+L R AC +
Sbjct: 1 MRTGAYTAHQTLTPEAASVLKQSLTLARRRGHSQVTPLHVASTLLTSSRSNLFRRACLKS 60
Query: 60 QSYS------VSPKLQFRALELCLGVAFDRLPSSKSVEF---PPISNSLMAAIKRSQAQQ 110
++ P L RALELC V+ +RLP++ + F P +SN+L+AA+KR+QA Q
Sbjct: 61 NPFTALGRQMAHPSLHCRALELCFNVSLNRLPTNPNPLFQTQPSLSNALVAALKRAQAHQ 120
Query: 111 RRNPDNYHLQQIHCNQQTASL-------LKVDLKYFVLAILDDPMASRVFGEAGFLSRDI 163
RR C +Q S +KV+L+ V++ILDDP SRV EAG S +
Sbjct: 121 RRG----------CVEQQQSQQNQPFLAVKVELEQLVVSILDDPSVSRVMREAGLSSVSV 170
Query: 164 KLAIIQPSVTQFPPRL-------------------------SLTRCP-PIFLYNLTD--S 195
K I S P +L+ P I+ +LT+ S
Sbjct: 171 KSNIEDDSSVVSPVFYGSSSSVGVFSSPCSPSSSENNQGGGTLSPNPSKIWHAHLTNHHS 230
Query: 196 FPGRAGLKLP----FGPDD---VDENCRRIGEVLAGRDEKKGKNPLLVGVCANSALKGFV 248
F P F PD V E+ + EVL G+ K +N ++VG S +G V
Sbjct: 231 FEQNPFFHFPKGKTFTPDQAFPVREDANPVIEVLLGKKNNKKRNTVIVGDSV-SLTEGVV 289
Query: 249 ESVNGG-KVGLFPRQIYGLDVVCVEY-EINEFVGGRVNVEMMMLKFKEVESAVGRCSGPG 306
+ G + G P + + ++ ++ + ++E + + K + G G
Sbjct: 290 AKLMGRIERGEVPDDLKQTHFIKFQFSQVGLNFMKKEDIEGQVRELKRKIDSFTSWGGKG 349
Query: 307 VVVNYGELKVLV--------------SDSVSTEAARFVVSQLTSLLKSGNGEKLWLIGAA 352
V+V G+L V +D + E R V S G K+WL+G A
Sbjct: 350 VIVCLGDLDWAVWGGGNSASSSNYSAADHLVEEIGRLVYDY------SNTGAKVWLLGTA 403
Query: 353 MSYETYLKMLAKFPGLDNDWDLQL---------LPIHWKSSLMGSFVPFGGFFSSPPDFK 403
SY+TY++ K P LD W LQ L +H SS M S V F + K
Sbjct: 404 -SYQTYMRCQMKQPPLDVHWALQAVSIPSGGLSLTLHASSSEMASQVMEMKPFRVKKEKK 462
Query: 404 NPVRSKSHYS-TLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGV 462
K C C E+E A + + + L ++ I D G
Sbjct: 463 GAREEKEEDKLNFCGECAFNYEKEAKAF--ISAQHKILPPWLQPHGDNNNINQKDELSG- 519
Query: 463 GTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQ 496
L++KWN CQ+LH +
Sbjct: 520 ------------------LRKKWNRFCQALHHKK 535
>gi|449446307|ref|XP_004140913.1| PREDICTED: uncharacterized protein LOC101210915 [Cucumis sativus]
Length = 762
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 201/415 (48%), Gaps = 61/415 (14%)
Query: 4 LVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQSYS 63
+ T+ Q LS E+ + A+G+AR+R H+ T LHV SA+L S LLR AC S+
Sbjct: 5 ICTIQLQALSIEAEATVKQAIGLARRRGHAHVTPLHVASAMLASSSGLLRRACLHCHSHP 64
Query: 64 VSPKLQFRALELCLGVAFDRLPSSKSVEF-------PPISNSLMAAIKRSQAQQRRNPDN 116
LQ +ALELC VA +RLP+S P +SN+L+AA KR+QA QRR
Sbjct: 65 ----LQCKALELCFNVALNRLPTSTPSPLFGPQYPNPCLSNALVAAFKRAQAHQRRGSIE 120
Query: 117 YHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAI-----IQPS 171
QQ H QQ LK++L+ +++ILDDP SRV EAGF S +K + ++
Sbjct: 121 NQQQQQHQQQQPILALKIELEQLIISILDDPSVSRVMREAGFSSTQVKNRVEKAVSLEVK 180
Query: 172 VT-QFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGP----DDVDENCRRIGEVLAGRD 226
+T + P LS+ N + S P K+P ++ +E + E L+ R
Sbjct: 181 ITHKTHPNLSI---------NPSQSIPFTQITKIPSTKQQFENNNEEEVTHVLEELSNRM 231
Query: 227 EKKGK---NPLLVGV---CANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVG 280
K + N ++VG + ++G +E G+V P+++ ++ + +N
Sbjct: 232 NNKMRRVSNTIIVGESLGTVETIVRGVMERFEKGEV---PKELKHVEFL----SLNPLFS 284
Query: 281 GR--VNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVST-----EAARF---- 329
R V+ E + K E+ V C G V+ G+LK VS+ S E RF
Sbjct: 285 LRNVVSKEEIEQKILELRCIVKSCMGKRVIFYLGDLK-WVSEFWSNYCYGEEERRFYSYV 343
Query: 330 --VVSQLTSLLKSGNGE---KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI 379
++ ++ L+ + N E K W++G A +++ Y+K P LD+ W L L +
Sbjct: 344 EELIMEIKRLVNNNNSENYGKFWVLGIA-TFQMYMKCKVGHPSLDSLWSLHPLTV 397
>gi|147827418|emb|CAN62072.1| hypothetical protein VITISV_031746 [Vitis vinifera]
Length = 861
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 133/415 (32%), Positives = 202/415 (48%), Gaps = 67/415 (16%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR V +Q L+ ++A + AV +AR+R H+Q T LHV S +L S LLR AC R
Sbjct: 1 MRAGVCSVQQVLTADAASXVKQAVTLARRRGHAQVTPLHVASVMLASSSGLLRSACLRSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEF-------PPISNSLMAAIKRSQAQQRRN 113
S+ LQ +ALELC VA +RLP+S S P +SN+L+AA KR+QA QRR
Sbjct: 61 SH----PLQCKALELCFNVALNRLPASSSSPLLAPHSSHPSLSNALVAAFKRAQAHQRR- 115
Query: 114 PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGF----LSRDIKLAIIQ 169
I QQ LKV+++ +++IL DP SRV EAGF L +I+ A+
Sbjct: 116 ------ASIENQQQPILALKVEIEQLIISILHDPSVSRVMREAGFSSTQLRTNIEQAVSL 169
Query: 170 PSVTQFPPRLSLTR---CPPIFL-YNLTDS---FPGRAGLKLPFGPDDVDENCRRIGEVL 222
+Q P SL++ PP+ L N++ S L PF D+ E + +L
Sbjct: 170 DVCSQSPAVSSLSKESNNPPLILGTNVSQSSTFIQFGVTLNNPF--DEAQE--EDVKSLL 225
Query: 223 AGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGR 282
K+ +N ++VG SA E V G + F R D+ V++
Sbjct: 226 DAFTSKRRRNTVVVGETLASA-----EGVVRGLMNKFERGDVPGDLRYVQF--------- 271
Query: 283 VNVEMMMLK--FKEVESAVGRCS-------GPGVVVNYGELKVLVSDSVSTEAAR----- 328
+++ + LK KEVE + + + GVV+ G+LK VS+ S R
Sbjct: 272 ISLPLFSLKNLSKEVEQKLVKLNCLLKSYVCRGVVLYLGDLK-WVSEFESNYGERRNYCS 330
Query: 329 ---FVVSQLTSLLKS-GNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI 379
++ +L ++ G+ ++WL+G A +++TY++ A P L+ W+L L I
Sbjct: 331 PVEHIIMELGRMMCGIGDRGRMWLLGTA-TFQTYMRCKAGHPSLETIWELHPLTI 384
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 21/185 (11%)
Query: 678 FDPRDYKTLRI---ALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNS------KRGIW 728
F + + LRI AL +V WQ + I I+ + R G R G N K W
Sbjct: 606 FKELNAENLRILCNALERRVPWQKDIIPEIASTILECRSGTLR--GKNKLKQREDKEETW 663
Query: 729 LAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLR 788
L FLG D GK+KIA +A++VFG+ K I + +SS ++ DF + R
Sbjct: 664 LLFLGVDFQGKEKIAREIAKLVFGSXSKFISIGLSSLGSTRADST------EDFLSKQAR 717
Query: 789 GKVLVDYI---YQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSIS 845
+ + YI + P+ V F+ED+++ D Q + + I +G+ + G S+
Sbjct: 718 DEPVGSYIEKFAEAVHENPHRVFFIEDVEQ-LDYSSQMGVKRGIESGRIQIAGGEAFSLE 776
Query: 846 GMIFV 850
I +
Sbjct: 777 DAIII 781
>gi|449503003|ref|XP_004161803.1| PREDICTED: uncharacterized protein LOC101225921 [Cucumis sativus]
Length = 1020
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 133/450 (29%), Positives = 205/450 (45%), Gaps = 62/450 (13%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSS-LLREACDRV 59
MR+ A Q + E+A VL ++ +AR+R H+Q T LHV L SS LLR+AC +
Sbjct: 1 MRSGGCAANQTFTPEAASVLKQSLSLARRRGHAQLTPLHVAVTLFSSRSSNLLRQACLKS 60
Query: 60 QSYSVSPKLQFRALELCLGVAFDRLPSSKSVEF---PPISNSLMAAIKRSQAQQRRNPDN 116
Q + S L RALELC VA +RLP++ F P +SN+L+AA+KR+QA QRR
Sbjct: 61 QPHQTSHPLHCRALELCFNVALNRLPTTPGPLFHGQPSLSNALIAALKRAQANQRRGCLE 120
Query: 117 YHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQ-- 174
QQ Q +KV+L+ +++ILDDP SRV EAGF S +K + SV+
Sbjct: 121 QQQQQQQQQHQPVLAIKVELEQLIISILDDPSVSRVMREAGFSSTLVKSNLEDSSVSSVF 180
Query: 175 ---------FPPRLSLTRCP------PIFLYNLTD----SFPGRAGLK--LPFGPDDVDE 213
F S +R ++N D F R+ + LPF P
Sbjct: 181 HCYGSSGGIFSSPSSPSRTDHHSDQRDNLIFNPGDFWQTQFLTRSSEQNPLPFSPQKRVP 240
Query: 214 NCRRIGE-----------VLAGRDEKKGKNPLLVGVCANSALKGFVESVNGGKV-GLFPR 261
N I E V +K KN +++G + ++G + + G G P
Sbjct: 241 NTNVIAESASSLKLDIKLVFEAMLGRKRKNTVIIGDSI-TMIEGLISELMGRVARGEVPN 299
Query: 262 QIYGLDVVCVEYEINEFVG-GRVNVEMMMLKFKE-VESAVGRCSGPGVVVNYGELKVLVS 319
++ + + R ++EM + + + ++S R G G ++ G+LK +V
Sbjct: 300 ELKSTKFIEFLLSPDSLSSMKREDIEMKVAELRRNIDSITSR--GWGAIIYTGDLKWMVE 357
Query: 320 DSVSTEAAR---------------FVVSQLTSLLK--SGNGEKLWLIGAAMSYETYLKML 362
V ++ +++ L+ S + KLWL+G A SY+TY++
Sbjct: 358 TDVREREETSFSSSKEASSYSQIDHMIEEISRLISFHSISCTKLWLVGTA-SYQTYMRCQ 416
Query: 363 AKFPGLDNDWDLQLLPIHWKSSLMGSFVPF 392
+ P L+ WDLQ +P+ SL S F
Sbjct: 417 MRHPTLETRWDLQAVPVPSDGSLGLSLHSF 446
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 121/294 (41%), Gaps = 69/294 (23%)
Query: 689 ALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAE 748
+LAE V WQ + I +I++A+ ++ S ++ W+ G DK+GK+++A A+AE
Sbjct: 644 SLAENVPWQSDTIPSIAKALMSFK--------SKNEELFWILIEGNDKIGKRRLARAIAE 695
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG+ +L ++ + P+ I + +++ VV
Sbjct: 696 SIFGSVEQLCKINARGNNEENPPSKI---------------------VENAMKTQEKLVV 734
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKH---SVHPQ 865
+ED+D+ DP L +GKF +D IF+ TS G S+ P
Sbjct: 735 LVEDIDQ-GDPQFMKFLADGFQSGKFGGMDEKDRDTRQFIFILTSGGEGGDKETDSIIPM 793
Query: 866 TTPVKFSEEIILGAKRWQMQTAISHGFA----DAAR----GSGMNVK----VTPRKENSN 913
T M AI+ GF D R S +N K + +E++N
Sbjct: 794 T-----------------MNIAINTGFGALSLDQKRRAEWESPINTKHQRTIKEEEEDAN 836
Query: 914 PESRRKRKRTDDGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTI 967
P + +G ++ Q + LDLNL A+E EE + EK + D I
Sbjct: 837 PNTNTIDAVKINGSGSLSRQSSFNK-----LDLNLKAEEDEE--AQEKTEDDNI 883
>gi|225464404|ref|XP_002269046.1| PREDICTED: uncharacterized protein LOC100254987 [Vitis vinifera]
Length = 840
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 194/400 (48%), Gaps = 58/400 (14%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR V +Q L+ ++A ++ AV +AR+R H+Q T LHV S +L S LLR AC R
Sbjct: 1 MRAGVCSVQQVLTADAASMVKQAVTLARRRGHAQVTPLHVASVMLASSSGLLRSACLRSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEF-------PPISNSLMAAIKRSQAQQRRN 113
S+ LQ +ALELC VA +RLP+S S P +SN+L+AA KR+QA QRR
Sbjct: 61 SHP----LQCKALELCFNVALNRLPASSSSPLLAPHSSHPSLSNALVAAFKRAQAHQRR- 115
Query: 114 PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGF----LSRDIKLAIIQ 169
I QQ LKV+++ +++IL DP SRV EAGF L +I+ A+
Sbjct: 116 ------ASIENQQQPILALKVEIEQLIISILHDPSVSRVMREAGFSSTQLRTNIEQAVSL 169
Query: 170 PSVTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEKK 229
+Q P SL++ I L N PF D+ E + +L K+
Sbjct: 170 DVCSQSPAVSSLSK--EITLNN-------------PF--DEAQE--EDVKSLLDAFTSKR 210
Query: 230 GKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEY-EINEFVGGRVNVEMM 288
+N ++VG SA E V G + F R D+ V++ + F ++ E +
Sbjct: 211 RRNTVVVGETLASA-----EGVVRGLMNKFERGDVPGDLRYVQFISLPLFSLKNLSKEEV 265
Query: 289 MLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAAR--------FVVSQLTSLLKS 340
K ++ + GVV+ G+LK VS+ S R ++ +L ++
Sbjct: 266 EQKLVKLTCLLKSYVCRGVVLYLGDLK-WVSEFESNYGERRNYCSPVEHIIMELGRMMCG 324
Query: 341 -GNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI 379
G+ ++WL+G A +++TY++ A P L+ W+L L I
Sbjct: 325 IGDRGRMWLLGTA-TFQTYMRCKAGHPSLETIWELHPLTI 363
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 21/185 (11%)
Query: 678 FDPRDYKTLRI---ALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNS------KRGIW 728
F + + LRI AL +V WQ + I I+ + R G R G N K W
Sbjct: 585 FKELNAENLRILCNALERRVPWQKDIIPEIASTILECRSGTLR--GKNKLKQREDKEETW 642
Query: 729 LAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLR 788
L FLG D GK KIA +A++VFG++ K I + +SS ++ DF + R
Sbjct: 643 LLFLGVDFQGKDKIAREIAKLVFGSQSKFISIGLSSLGSTRADST------EDFLSKQAR 696
Query: 789 GKVLVDYI---YQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSIS 845
+ + YI + P+ V F+ED+++ D Q + + I +G+ + G S+
Sbjct: 697 DEPVGSYIEKFAEAVHENPHRVFFIEDVEQ-LDYSSQMGVKRGIESGRIQIAGGEAFSLE 755
Query: 846 GMIFV 850
I +
Sbjct: 756 DAIII 760
>gi|168010434|ref|XP_001757909.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690786|gb|EDQ77151.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1030
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 197/467 (42%), Gaps = 97/467 (20%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIA 743
K + L EKV WQ +AI TIS + + G G G +K G WL LGPD+VGK+ IA
Sbjct: 601 KYVHKGLMEKVVWQGKAISTISTFIVNAQTGRGELRGGAAKAGTWLLLLGPDQVGKRLIA 660
Query: 744 SALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSK 803
ALAE+V G K I+ R + + ID + RG+ VD I R+K
Sbjct: 661 GALAELVVGVAAKPIYFGDLGYSRWGR-----KVEEID--GMQYRGRTAVDSIADALRAK 713
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV------ATSTILK 857
P SV+ LED+D+A ++++ L +A+ TGKF+DS G VS+ I + A S + K
Sbjct: 714 PLSVLLLEDIDQAVS-VIRTKLMRAMVTGKFSDSNGGHVSVGNSIIIMTSRLGANSNLGK 772
Query: 858 GKHSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKE------- 910
GK ++ FSE G + G+ M++ + P +E
Sbjct: 773 GKENI--------FSE-----------------GRLASMHGARMSLLLQPPREKEIVLQG 807
Query: 911 NSNPESRRKRKRTDDGDSPIN-----------------------SQKQVDDSFRSY--LD 945
+ + R RT ++P N +K+V F LD
Sbjct: 808 DMDISVVRDTIRTSALENPANPMSGGMVLKRKASGFLSRALLGVKRKKVSTPFGRIVALD 867
Query: 946 LNLPADEAEEDTSSEKFDSDTICENSG-----------AWLEDFFDQTDAIAVFQPLNFD 994
LNL A+E E + + I N G F D +F+P +
Sbjct: 868 LNLSAEENEAVLAETVTSHEEIATNIGVSDPVLRAVQEVLSPKFCSLVDETVMFEPFDLM 927
Query: 995 LLAEKILREIQ-------PKFQRAFGFEVLLEIDYEILVQILAATWLS-DRKKAIENWIE 1046
LA IL ++ PKF +E+D++IL I++ TW + ++A E W+E
Sbjct: 928 GLANWILLQLSRACSGLVPKFC------TRIEVDFQILEHIVSTTWRTPGGRQAFEGWVE 981
Query: 1047 NVVLRSFYEVRRKHHFTAGSVVKLVAHEGLLVEEEASGIRLPKIINV 1093
+ + V + V++ A+EG +E G LP I V
Sbjct: 982 DKLKSCLKAVTANSSVSEDRVLRF-AYEGCFSKELCLGSELPLQIEV 1027
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 96/172 (55%), Gaps = 14/172 (8%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR+ + LS + +VL A+ AR+R H+Q LHV LL +LR+AC
Sbjct: 1 MRSGAAAVQNTLSLPAQQVLRQAISAARERGHAQVQPLHVAFVLLAHGDPVLRQACADTH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRL----PSSKSVEFPPISNSLMAAIKRSQAQQRRN-PD 115
S ++ Q ALELC VA DRL S +V +SN+L+AA+KR+QAQQ+R PD
Sbjct: 61 SQTLHGLHQCHALELCFNVALDRLQQCSSSGSTVNLLGLSNALVAALKRAQAQQKRGCPD 120
Query: 116 NYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAI 167
QQ ++KV+L+ +++IL+DP SRV EAGF S+ +K I
Sbjct: 121 ---------QQQAPLVMKVELEMVIISILEDPSVSRVMEEAGFFSQQVKTNI 163
>gi|413939265|gb|AFW73816.1| hypothetical protein ZEAMMB73_717603 [Zea mays]
Length = 953
Score = 137 bits (345), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 215/503 (42%), Gaps = 89/503 (17%)
Query: 32 HSQTTSLHVVSALLCVPSSLLREACDRVQSYSVSPKLQFRALELCLGVAFDRLPSSKSVE 91
H+ TT LH +ALL P+ LLR+AC V + L+ RAL+LC VA DRLP+S ++
Sbjct: 41 HAHTTPLHAAAALLSGPAPLLRDAC--VAGLASPHPLRCRALDLCFSVALDRLPTSTELQ 98
Query: 92 F------------PPISNSLMAAIKRSQAQQRRNPDNYHLQQIHCNQQTASLLKVDLKYF 139
PP+SN+L AA+KR+ A RR I +V + +
Sbjct: 99 HHEGGAFHHASAAPPLSNALAAALKRAYAHHRR---------IGSGGVETDDHRVGVPHL 149
Query: 140 VLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRLSLTRCPPIFLYNLTDSFPGR 199
VLAILDDP +RV EA F S +K A+++ LS P Y +
Sbjct: 150 VLAILDDPSVARVMREASFSSTAVKAAMLR--------SLSDPAAPDAAAYVSARVMHRQ 201
Query: 200 AGLKLPFGPDDVDENCRRIGEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLF 259
A + V+ R K +NP+LVG + V++V V L
Sbjct: 202 ASHREEEVAKVVEVLKR-----------AKKRNPVLVGDTVD------VDAVVQEVVTLI 244
Query: 260 PRQIYG-LDVVCVEYEINEFVGGRVNVEMMMLKFKEVESAVGRCSG-PGVVVNYGELKVL 317
RQ G V+ E + V ++ + K KE+ AV S GVVVN G L+ L
Sbjct: 245 QRQRLGNARVISFPKEFGDLVD--MDRARLTAKVKELGEAVRSASASAGVVVNLGNLQWL 302
Query: 318 VSD---------------SVSTEAARFVVSQLTSLLK-SGNGE-KLWLIGAAMSYETYLK 360
V + V + AR V+++ +L SG GE ++W+IG A + TYLK
Sbjct: 303 VEERCAAPRGEQQQEKRRDVVLDTARAAVAEMARVLNLSGEGEHRVWVIGTA-TCATYLK 361
Query: 361 MLAKFPGLDNDWDLQLLPI-----HWKSSLMGSFVPFG---GFFSSPPDFKNPVRSK--S 410
P L+++WDLQ +PI +G G G SS + + +
Sbjct: 362 CQVYHPALESEWDLQAVPITPRPPPPPPPPLGLSPSAGVNRGILSSSVEVLSTAMTSPMQ 421
Query: 411 HYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVGTAKAKDD 470
+LC C E E+E A + E + +Q + S + S G +A++
Sbjct: 422 RAPSLCSACAEGYERERAEMASSERAPCPAEQPM-----SQWLQIGTPSSGRPADRAQEK 476
Query: 471 VTALNAKIMELQRKWNDTCQSLH 493
+ EL+R+W D C LH
Sbjct: 477 AREAD----ELRRRWRDRCAQLH 495
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 14/173 (8%)
Query: 682 DYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKK 741
D K L L E V WQ EA ++ +++ R R + + W+ F GPD GK+
Sbjct: 554 DDKLLVRRLTEAVRWQPEAAAAVASTIAKARSSESRRRRTTAGVDAWIVFAGPDVAGKRS 613
Query: 742 IASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFD-CQNIDFCDCKLRGKVLVDYIYQEF 800
+A AL++ VFG + R+ P + D +++ C RG+ +D + +
Sbjct: 614 MAEALSKSVFGTGAVTL--------RLGWPQAGDDGGESVVSC----RGQTALDRMAEAI 661
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
R+ P+ VV L+ +D AD +V +S+ +A+ +G+ +DS+GRDV++ IFV S
Sbjct: 662 RANPFRVVVLDGVDH-ADSVVHASILRAVESGRLSDSHGRDVALGNNIFVVIS 713
>gi|15233760|ref|NP_194721.1| heat shock protein-relatedlike protein [Arabidopsis thaliana]
gi|4914416|emb|CAB43667.1| putative protein [Arabidopsis thaliana]
gi|7269891|emb|CAB79750.1| putative protein [Arabidopsis thaliana]
gi|332660293|gb|AEE85693.1| heat shock protein-relatedlike protein [Arabidopsis thaliana]
Length = 1017
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 161/577 (27%), Positives = 237/577 (41%), Gaps = 123/577 (21%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVP-SSLLREACDRV 59
MRT Q L+ E+A VL ++ +AR+R HSQ T LHV S LL S+L R AC +
Sbjct: 1 MRTGAYTVHQTLTPEAASVLKQSLTLARRRGHSQVTPLHVASTLLTSSRSNLFRRACLKS 60
Query: 60 QSYS------VSPKLQFRALELCLGVAFDRLPSSKSVEF---PPISNSLMAAIKRSQAQQ 110
++ P L RALELC V+ +RLP++ + F P +SN+L+AA+KR+QA Q
Sbjct: 61 NPFTALGRQMAHPSLHCRALELCFNVSLNRLPTNPNPLFQTQPSLSNALVAALKRAQAHQ 120
Query: 111 RRNPDNYHLQQIHCNQQTASL-------LKVDLKYFVLAILDDPMASRVFGEAGFLSRDI 163
RR C +Q S +KV+L+ V++ILDDP SRV EAG S +
Sbjct: 121 RRG----------CVEQQQSQQNQPFLAVKVELEQLVVSILDDPSVSRVMREAGLSSVSV 170
Query: 164 KLAIIQPSVTQFPPRL-------------------------SLTRCP-PIFLYNLTD--S 195
K I S P +L+ P I+ +LT+ S
Sbjct: 171 KSNIEDDSSVVSPVFYGSSSSVGVFSSPCSPSSSENNQGGGTLSPNPSKIWHAHLTNHHS 230
Query: 196 FPGRAGLKLP----FGPDD---VDENCRRIGEVLAGRDEKKGKNPLLVGVCANSALKGFV 248
F P F PD V E+ + EVL G+ K +N ++VG S +G V
Sbjct: 231 FEQNPFFHFPKGKTFTPDQAFPVREDANPVIEVLLGKKNNKKRNTVIVGDSV-SLTEGVV 289
Query: 249 ESVNGG-KVGLFPRQIYGLDVVCVEY-EINEFVGGRVNVEMMMLKFKEVESAVGRCSGPG 306
+ G + G P + + ++ ++ + ++E + + K + G G
Sbjct: 290 AKLMGRIERGEVPDDLKQTHFIKFQFSQVGLNFMKKEDIEGQVRELKRKIDSFTSWGGKG 349
Query: 307 VVVNYGELKVLV--------------SDSVSTEAARFVVSQLTSLLKSGNGEKLWLIGAA 352
V+V G+L V +D + E R V S G K+WL+G A
Sbjct: 350 VIVCLGDLDWAVWGGGNSASSSNYSAADHLVEEIGRLVYDY------SNTGAKVWLLGTA 403
Query: 353 MSYETYLKMLAKFPGLDNDWDLQL---------LPIHWKSSLMGSFV----PFGGFFSSP 399
SY+TY++ K P LD W LQ L +H SS M S V PF
Sbjct: 404 -SYQTYMRCQMKQPPLDVHWALQAVSIPSGGLSLTLHASSSEMASQVMEMKPFRVKEEEE 462
Query: 400 PDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTS 459
+ K ++ C C E+E A + + + L ++ I D
Sbjct: 463 GAREEEEEDKLNF---CGECAFNYEKEAKAF--ISAQHKILPPWLQPHGDNNNINQKDEL 517
Query: 460 KGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQ 496
G L++KWN CQ+LH +
Sbjct: 518 SG-------------------LRKKWNRFCQALHHKK 535
>gi|356577524|ref|XP_003556874.1| PREDICTED: uncharacterized protein LOC100775479 [Glycine max]
Length = 828
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 145/518 (27%), Positives = 237/518 (45%), Gaps = 81/518 (15%)
Query: 4 LVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQSYS 63
+ ++ Q L+ E+A ++ AV +A +R H+Q T LH+ + +L + LLR+ + S+
Sbjct: 5 VCSIQLQALTPEAATLVKQAVTLATRRGHAQVTPLHIATVMLATSTGLLRKVFLQCHSHP 64
Query: 64 VSPKLQFRALELCLGVAFDRLPSSKSVEF--------PPISNSLMAAIKRSQAQQRRNPD 115
LQ++ALELC V+ +RLP+ P +SN+L+AA KR+QA QRR
Sbjct: 65 ----LQYKALELCFNVSLNRLPAPTPSPLLSPPYSTTPSLSNALVAAFKRAQAHQRRG-- 118
Query: 116 NYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQF 175
I QQ LK++++ +++ILDDP SRV EAGF S A+++ V Q
Sbjct: 119 -----SIENQQQPILALKIEMEQLIVSILDDPSISRVMREAGFSS-----ALVKTRVEQ- 167
Query: 176 PPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEKKGKNPLL 235
+S+ C + KL DDV + E+++ R +N ++
Sbjct: 168 --AVSMEVCSQ------HQASKENTTTKLQVLGDDVTS---VLSELVSKR-----RNTVI 211
Query: 236 VG---VCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKF 292
VG A +G +E + G V R + + + V + ++ E + K
Sbjct: 212 VGESLASAEGVARGVMERLETGSVQGELRFVQFVSLPLVSFR-------NISKEEVERKL 264
Query: 293 KEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAAR--------FVVSQLTSLLKSGNGE 344
E+ + V G G+++ G+LK L S R +V +L L+ SGN E
Sbjct: 265 VELRNLVKSHVGRGLILYLGDLKWLFEFWSSYCEQRTNYYCSVEHMVMELKKLI-SGNRE 323
Query: 345 --KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQ--LLPIHWKSSLMGSFVPFGGFFSSPP 400
+LWL+G A ++ TY+K A P L+ WDL +P+ S + F S
Sbjct: 324 NSRLWLMGIA-TFRTYIKGKACHPSLETIWDLHPFTVPVGSLSLALNFDSDFHVQERSKV 382
Query: 401 DFKNPV---RSK-SHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQ-CLDNLTSSDRIAA 455
FK+ R+K Y T C C+ E+E ++ SS +++ + C +L +
Sbjct: 383 TFKDESFEERAKVRKYLTCCRDCSLNFEKEAKSI---ASSFTISKRDCTTSLPT-----W 434
Query: 456 LDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLH 493
L K + +D NAK+ ++ +KWN C S H
Sbjct: 435 LKNCKAERSRMMEDQE---NAKLWDICKKWNSFCSSAH 469
Score = 46.2 bits (108), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 22/203 (10%)
Query: 682 DYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGS-----NSKRGIWLAFLGPDK 736
+ K L AL +K Q + + I+ V R G R VG+ + ++ W FLG D
Sbjct: 585 NLKILCDALEKKAPQQKKTVKEIASTVLLCRSG-MRKVGNHLVKRDDRQETWFFFLGVDS 643
Query: 737 VGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYI 796
K+ ++ LA+++FG+ + + + S F + + + + R + Y+
Sbjct: 644 QAKEMVSKELAKVIFGSYSNFVSIGL----------SCFSLTHEESKNKRARDEFGGSYL 693
Query: 797 Y---QEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ P+ V F+EDL++ D + + + I +G T G V + I + +S
Sbjct: 694 QRFGEALNENPHRVFFMEDLEQ-VDHFSKKGVKQGIESGAITLPGGESVPLKDAIVIFSS 752
Query: 854 TILKG--KHSVHPQTTPVKFSEE 874
+ P T FS+E
Sbjct: 753 ECFSSVLSRACSPARTTSPFSDE 775
>gi|357142495|ref|XP_003572591.1| PREDICTED: uncharacterized protein LOC100844688 [Brachypodium
distachyon]
Length = 841
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 193/400 (48%), Gaps = 36/400 (9%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR V +Q L+ E+A V+ AV +AR+R ++Q T LHV SA+L + LLR AC R
Sbjct: 1 MRAGVCTVQQALTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLHASTGLLRAACLRSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSK----SVEFPP-ISNSLMAAIKRSQAQQRRNPD 115
S+ LQ +ALELC VA +RLP+ V +PP +SN+L+AA KR+QA QRR
Sbjct: 61 SH----PLQCKALELCFNVALNRLPAGSPLHGHVYYPPSLSNALVAAFKRAQAHQRRGGS 116
Query: 116 NYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQF 175
QQ QQ +K++L+ V++ILDDP SRV EAGF S +K + V+
Sbjct: 117 VDTNQQ----QQPVLAVKIELEQLVISILDDPSVSRVMREAGFSSPQVKANVEHAVVSSI 172
Query: 176 PPRLSLTRCPPIFLYNLTDSFPGR-AGL-KLPFGPDDVDENCRRIGEVLA-GRDEKKGKN 232
LT P + F + AG+ KLP +E+ I + LA GR +++
Sbjct: 173 EGTKGLTNPNPSSSSSPPTEFENKPAGIGKLPVVEQVREEDVAAILDCLASGRSKRRVMV 232
Query: 233 PLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKF 292
A +A V+ + K P ++ + V + E R+ E+
Sbjct: 233 VAESSSAAEAAAMAAVDRI---KEKAAPPRVISISVSMFRDALREDAERRLG-ELRRAVA 288
Query: 293 KEVESAVGRCSGPGVVVNYGELKVLVS--------DSVSTE-----AARFVVSQLTSLLK 339
++ ++A G GVV+ +L+ S S+ A V ++ +L
Sbjct: 289 RDSKAAAG--GSRGVVLVVEDLRWAAEFWAGRVGRRSASSSCYYYCAVEHAVGEVRALAC 346
Query: 340 SGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI 379
G G+ +WL+ A SY+ Y++ A P L++ W +Q L I
Sbjct: 347 RGEGDGVWLV-AYGSYQAYMRCRAGNPSLESLWGIQPLAI 385
Score = 56.6 bits (135), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 18/165 (10%)
Query: 682 DYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNG-RDVGSNSKRGIWLAFLGPDKVGKK 740
+ K L AL ++V WQ E + I+ V R R G R +K W+ FLG D GK
Sbjct: 581 NLKVLCGALEKEVPWQKEIVPEIASTVLRCRSGMAKRRDAMKAKEETWMLFLGGDTDGKL 640
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK-------VLV 793
++A LA +VFG++ + +D ++ ++ F + K G +
Sbjct: 641 RVARELAGLVFGSRKSFVSIDA---------DACSPARSDSFVEQKHHGSKRHRSEASHL 691
Query: 794 DYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSY 838
+ +++ R P+ V+ +E +++ D Q + +AI +G S+
Sbjct: 692 ERLFEAVRDNPHRVILMEGVER-VDRRCQMGIKEAIESGVVRRSH 735
>gi|242061870|ref|XP_002452224.1| hypothetical protein SORBIDRAFT_04g022000 [Sorghum bicolor]
gi|241932055|gb|EES05200.1| hypothetical protein SORBIDRAFT_04g022000 [Sorghum bicolor]
Length = 880
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 203/437 (46%), Gaps = 91/437 (20%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALL------------CVP 48
MR +Q L+ E+A V+ AV +AR+R ++Q T LHV SA+L P
Sbjct: 1 MRAGGCTVQQALAPEAAAVVKQAVSLARRRGNAQVTPLHVASAMLHQQVVAAATGTGTGP 60
Query: 49 SS-----LLREACDRVQSYSVSPKLQFRALELCLGVAFDRLPSSKS--------VEFPP- 94
SS LLR AC +QS+S LQ +ALELC VA +RLP+S S V +PP
Sbjct: 61 SSSTAAGLLRAAC--LQSHS--HPLQCKALELCFNVALNRLPASASPLLGGHGHVYYPPS 116
Query: 95 ISNSLMAAIKRSQAQQRRNPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFG 154
+SN+L+AA KR+QA QRR + QQ +K++L+ V++ILDDP SRV
Sbjct: 117 LSNALVAAFKRAQAHQRRG-------SVDTQQQPVLAVKIELEQLVISILDDPSVSRVMR 169
Query: 155 EAGFLSRDIKLAIIQPSVTQFPPRLSLTRCPPIFLYN--------LTDSFPGRAGLKLPF 206
EAGF S +K A ++ +V+ S + + ++ P + L+LP
Sbjct: 170 EAGFSSTQVK-ANVEQAVSSIEANNSASTNTAAAAHQNPNPRAAPHEETMPSK--LQLPL 226
Query: 207 GPDDV-DENCRRIGEVLAGRDEKKGKNPLLVGVCANSA---LKGFVESVNGGKVGLFPRQ 262
D V DE+ + + LA R +K+ ++V CA +A + VE + G+ L Q
Sbjct: 227 DLDQVRDEDVAVVLDCLASRSKKR---VMVVAECAATAEAPTRAAVEKIKRGE-ALRGAQ 282
Query: 263 IYGLDV-------------VCVEYEINEFVGGRVNVEMMML-------KFKEVESAVGRC 302
+ L V + VE VGGR ++++ +F + GR
Sbjct: 283 VVSLRVSRFRDLPRDEAERLLVELRCAVKVGGRAGGVVLVVEDLGWAAEFWAARAESGRA 342
Query: 303 SGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWLIGAAMSYETYLKML 362
P Y A V+++ +L G G+ +WLIG +Y++Y++
Sbjct: 343 RWPSSCCYYC-------------AVEHAVAEVRALACRG-GDGVWLIGYG-TYQSYMRCR 387
Query: 363 AKFPGLDNDWDLQLLPI 379
A P L+ W LQ L +
Sbjct: 388 AGQPSLETLWGLQTLAV 404
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 33/194 (17%)
Query: 682 DYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGR--DVGSNSKR-------GIWLAFL 732
+ K L AL ++V WQ E + I+ V + R G R D ++S R W+ F
Sbjct: 614 NLKVLCSALEKEVPWQAEIVPEIASTVLQCRSGMARRRDAAASSSRPPAFAKEDTWMLFH 673
Query: 733 GPDKVGKKKIASALAEIVFGNKGKLIHV-------------DVSSEQRVSQPNSIFDCQN 779
G D GK ++A LA +VFG++ + + D SS+Q+ +P + + +
Sbjct: 674 GGDADGKVRVARELARLVFGSRKSFVSIAGSGTTASSPARSDDSSKQQRKRPRLMEEASD 733
Query: 780 IDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYG 839
C + +Y+ R P+ V+ ++D+++ Q + +AI G G
Sbjct: 734 -HGCH---------ESLYEAVRDNPHRVILVQDVEQGG-WRCQRDILEAIQRGLVRSHAG 782
Query: 840 RDVSISGMIFVATS 853
D + G V S
Sbjct: 783 GDEAALGDAIVVLS 796
>gi|224142299|ref|XP_002324496.1| predicted protein [Populus trichocarpa]
gi|222865930|gb|EEF03061.1| predicted protein [Populus trichocarpa]
Length = 543
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 174/370 (47%), Gaps = 40/370 (10%)
Query: 694 VGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGN 753
V WQ +A ++ V++ ++G+G+ + SK IWL F GPD+ GKKK+ASAL+E+V G
Sbjct: 167 VWWQRDAASAVATTVTQCKLGHGKGRSTGSKGDIWLLFTGPDRAGKKKMASALSELVCGA 226
Query: 754 KGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDL 813
++ + E S+ RGK ++D I + R P+SV+ LED+
Sbjct: 227 NPIMVCLGSWREDGESE--------------VSFRGKTVLDRIAEAVRRNPFSVIILEDI 272
Query: 814 DKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSE 873
D+ AD +V+ S+ +A+ G+ DS GR++S+ +IF+ T+ L + +
Sbjct: 273 DE-ADMLVRGSIKRAMERGRIADSLGREISLGNVIFILTANRLPDNLKFLSNGISLDEKK 331
Query: 874 EIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENS-NPESRRKRKRTDDGDS---P 929
L + WQ++ +S + R+ N + E R + R D G +
Sbjct: 332 LASLASGGWQLRLTLSE-------------RTAKRRANWLHDEERSAKPRKDLGTALAFD 378
Query: 930 INSQKQV--DDSFRSYLDLNLPADEAEEDTSSEKFDSDTICENSGAWLEDFFDQTDAIAV 987
+N + D + S+ +L D +ED + + + S ++ + D V
Sbjct: 379 LNEAAETGDDKADGSHNSSDLTVDHEDEDALNNRLLTSATSSVS----KELLNLVDDHIV 434
Query: 988 FQPLNFDLLAEKILREIQPKFQRAFGFEVLLEIDYEILVQILAATWLSDRKKAIENWIEN 1047
F+ +F + I I KF F ++ +EI E L +I+ WL+ + +E W +N
Sbjct: 435 FKHADFSSIRHDISNSITKKFSTIFSNQMQIEIQDEALEKIVGGIWLA--RTGLEEWTDN 492
Query: 1048 VVLRSFYEVR 1057
V++ S +++
Sbjct: 493 VLVPSLRQLK 502
>gi|449534098|ref|XP_004174005.1| PREDICTED: chaperone protein ClpB1-like, partial [Cucumis sativus]
Length = 387
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 140/403 (34%), Positives = 201/403 (49%), Gaps = 52/403 (12%)
Query: 1 MRTLVTL--ARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCV-PS--SLLREA 55
MR++ T ++Q L+ E+A VL ++ +A +R HS T LHV S LL PS SL R A
Sbjct: 1 MRSVTTCVSSQQTLTPEAASVLKHSLSLAARRGHSHVTPLHVASTLLSSKPSTLSLFRRA 60
Query: 56 CDRVQSYSVSPKLQFRALELCLGVAFDRLPSSKS--VEFPPISNSLMAAIKRSQAQQRRN 113
C ++S+ P LQ RALELC VA +RLP+S + P +SN+L+AA+KR+QA QRR
Sbjct: 61 C--LKSHPPHP-LQSRALELCFNVALNRLPTSSPPLLHSPSLSNALIAALKRAQAHQRRG 117
Query: 114 PDNYHLQQIHCNQQTASL-LKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPS- 171
L H QQ L +KV+L++ V++ILDDP SRV EAGF S +K I + S
Sbjct: 118 SS---LDHQHQQQQHPLLTIKVELQHLVISILDDPSVSRVMREAGFSSTAVKNNIEEYSS 174
Query: 172 -VTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRR-IGEVLAGRDEKK 229
+ + T P+F FPG EN + + EV G +K
Sbjct: 175 NIITTSTATTQTTTTPLFF------FPGSGS-------SSGSENASKFVFEVFLGM--RK 219
Query: 230 GKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMM 289
KN +LVG +S+ +E + K+G P ++ G+ VE+ E +
Sbjct: 220 RKNVVLVG---DSSEGVVLEVMRKFKMGEVPEEMKGVKF--VEFVPYNNNNNSSVSEFLR 274
Query: 290 LKFKEVESAVGRCSGPGVVVNYGELKVLVS-DSVSTEAARFVVSQLTSLLKSG---NGE- 344
K +E G GVVV G+LK +V S S +V ++ LL G NG
Sbjct: 275 RKLEENYDHTENNEG-GVVVYVGDLKWIVERGSCSNFGVDGLVGEIERLLLEGFHYNGHN 333
Query: 345 --------KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI 379
K+W++G A SY+ Y++ + P L+ WDL LP+
Sbjct: 334 NINIKKKIKIWVMGVA-SYQIYMRCQMRLPSLETQWDLHALPL 375
>gi|218191719|gb|EEC74146.1| hypothetical protein OsI_09225 [Oryza sativa Indica Group]
Length = 643
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 156/539 (28%), Positives = 229/539 (42%), Gaps = 119/539 (22%)
Query: 32 HSQTTSLHVVSALLCVPSSLLREACDRVQSYSVSPKLQFRALELCLGVAFDRLPSSKSVE 91
H+ TT LH +ALL P+ LLR+AC V + L+ RAL+LC VA DRLP+S +
Sbjct: 44 HAHTTPLHAAAALLSGPAPLLRDAC--VAGLASPHPLRCRALDLCFAVALDRLPTSTEHQ 101
Query: 92 F----PPISNSLMAAIKRSQAQQRRNPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDP 147
PP+SN+L AA+KR+ A RR I A +V + + VLAILDDP
Sbjct: 102 HHHAAPPLSNALAAALKRAYAHHRR---------IGSGVVEADDHRVGVPHLVLAILDDP 152
Query: 148 MASRVFGEAGFLSRDIKLAIIQPSVTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFG 207
+RV EA F S +K A+ L +L+D P
Sbjct: 153 SVARVMREASFSSTAVKAAM---------------------LRSLSD----------PAA 181
Query: 208 PDD-VDENCRRIGEVLAGRDE---------KKGK--NPLLVGVCANSALKGFVESVNGGK 255
PD V N R + ++ R+E K+GK NP+LVG + V++V
Sbjct: 182 PDSGVYVNARVLHRQVSHREEEVNKVVEVLKRGKKRNPVLVGDTVD------VDAVVQEV 235
Query: 256 VGLFPRQIYG-LDVVCVEYEINEFVGGRVNVEMMMLKFKEVESAVGR------CSGPGVV 308
V + RQ G V+ + E + V ++ + K KE+ A+ GVV
Sbjct: 236 VTMIQRQRLGNARVISFQREFGDLVD--LDRAELAAKIKELGEAIRSELLSPASRSAGVV 293
Query: 309 VNYGELKVLVSD------------SVSTEAARFVVSQLTSLLK-SGNGE-KLWLIGAAMS 354
VN G L+ LV + V + AR V+++ +L+ SG E ++W+IG A +
Sbjct: 294 VNLGNLQWLVEERCVAPGEQEKRRDVVLDTARAAVAEMARILRQSGEREHRVWVIGTA-T 352
Query: 355 YETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGSF----------VPFGGFFSSPPDFKN 404
TYLK P L+++WDLQ +PI + V G SS +
Sbjct: 353 CATYLKCQVYHPSLESEWDLQAVPITPRPPPPPPSSLGLSPSVNGVNRGILSSSVEVLSS 412
Query: 405 PVRS---KSHYSTLCYLCTEKLEQEVAALLK------LESSDSVTDQCLDNLTSSDRIAA 455
+ + +S +LC C + E+E A + L +++ Q L T S
Sbjct: 413 AMTTSAMQSRSPSLCSACLDGYERERADMASSPGCGALHATEQPMSQWLQIGTPSSARPP 472
Query: 456 LDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEF 514
D +A+D + EL+R+W D C LH R S V SE+
Sbjct: 473 FD--------RAQDKAREAD----ELRRRWLDRCAQLHSHGGGGCGGGRPSSMVTCSEW 519
>gi|115449139|ref|NP_001048349.1| Os02g0788600 [Oryza sativa Japonica Group]
gi|47497764|dbj|BAD19864.1| 101 kDa heat shock protein-like [Oryza sativa Japonica Group]
gi|113537880|dbj|BAF10263.1| Os02g0788600 [Oryza sativa Japonica Group]
Length = 965
Score = 132 bits (333), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 156/539 (28%), Positives = 229/539 (42%), Gaps = 119/539 (22%)
Query: 32 HSQTTSLHVVSALLCVPSSLLREACDRVQSYSVSPKLQFRALELCLGVAFDRLPSSKSVE 91
H+ TT LH +ALL P+ LLR+AC V + L+ RAL+LC VA DRLP+S +
Sbjct: 43 HAHTTPLHAAAALLSGPAPLLRDAC--VAGLASPHPLRCRALDLCFAVALDRLPTSTEHQ 100
Query: 92 F----PPISNSLMAAIKRSQAQQRRNPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDP 147
PP+SN+L AA+KR+ A RR I A +V + + VLAILDDP
Sbjct: 101 HHHAAPPLSNALAAALKRAYAHHRR---------IGSGVVEADDHRVGVPHLVLAILDDP 151
Query: 148 MASRVFGEAGFLSRDIKLAIIQPSVTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFG 207
+RV EA F S +K A+ L +L+D P
Sbjct: 152 SVARVMREASFSSTAVKAAM---------------------LRSLSD----------PAA 180
Query: 208 PDD-VDENCRRIGEVLAGRDE---------KKGK--NPLLVGVCANSALKGFVESVNGGK 255
PD V N R + ++ R+E K+GK NP+LVG + V++V
Sbjct: 181 PDSGVYVNARVLHRQVSHREEEVNKVVEVLKRGKKRNPVLVGDTVD------VDAVVQEV 234
Query: 256 VGLFPRQIYG-LDVVCVEYEINEFVGGRVNVEMMMLKFKEVESAVGR------CSGPGVV 308
V + RQ G V+ + E + V ++ + K KE+ A+ GVV
Sbjct: 235 VTMIQRQRLGNARVISFQREFGDLVD--LDRAELAAKIKELGEAIRSELLSPASRSAGVV 292
Query: 309 VNYGELKVLVSD------------SVSTEAARFVVSQLTSLLK-SGNGE-KLWLIGAAMS 354
VN G L+ LV + V + AR V+++ +L+ SG E ++W+IG A +
Sbjct: 293 VNLGNLQWLVEERCVAPGEQEKRRDVVLDTARAAVAEMARILRQSGEREHRVWVIGTA-T 351
Query: 355 YETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGSF----------VPFGGFFSSPPDFKN 404
TYLK P L+++WDLQ +PI + V G SS +
Sbjct: 352 CATYLKCQVYHPSLESEWDLQAVPITPRPPPPPPSSLGLSPSVNGVNRGILSSSVEVLSS 411
Query: 405 PVRS---KSHYSTLCYLCTEKLEQEVAALLK------LESSDSVTDQCLDNLTSSDRIAA 455
+ + +S +LC C + E+E A + L +++ Q L T S
Sbjct: 412 AMTTSAMQSRSPSLCSACLDGYERERADMASSPGCGALHATEQPMSQWLQIGTPSSARPP 471
Query: 456 LDTSKGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEF 514
D +A+D + EL+R+W D C LH R S V SE+
Sbjct: 472 FD--------RAQDKAREAD----ELRRRWLDRCAQLHSHGGGGCGGGRPSSMVTCSEW 518
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 171/441 (38%), Gaps = 79/441 (17%)
Query: 682 DYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRG-IWLAFLGPDKVGKK 740
D K L L E V WQ EA ++ A+++ R G + G R W+ F G D GK
Sbjct: 570 DEKLLVKRLTEAVRWQPEAAAAVAAAITKARSGERKRRGMGPTRADTWVLFSGHDVAGKT 629
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
K+A AL+ VFG + + + + I C RG+ +D +
Sbjct: 630 KMAEALSMSVFGTNAVALRLAGNGGE------PIASC----------RGRTALDCVADAI 673
Query: 801 RSKPYSVVFLEDLDKAADP-IVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
R+ P V+ L+ D D +VQ+S+ +A+ +G+ DS GRDV++ IFV S
Sbjct: 674 RANPLRVIVLDGFDHHDDDRVVQASILRAVESGRLVDSRGRDVALGEAIFVVMS------ 727
Query: 860 HSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRK 919
+ +R Q H F D+ + V+ RK P+
Sbjct: 728 ----------------LDDTRRCQED----HQFTDSPWNLELRVRNNARKRRPEPQ---- 763
Query: 920 RKRTDDGDSPINSQKQVDDSFRSYLDLNLPA--DEAEEDTS----SEKFDSDTICENSGA 973
GD + +K DS +LDLNL D ++D S S SD E+
Sbjct: 764 -PLDGAGDRRLKPRK---DSPPLHLDLNLSMCEDHTDDDDSGGEESRNSSSDLTVEHEQE 819
Query: 974 W---------------LEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLL 1018
+ + DA VF+P++F L + + K A G L
Sbjct: 820 YGQPAAAAAKFSAPSSFSELTKAVDATVVFKPVDFGPLKRSVSDVVSAKLGDAAGAGAGL 879
Query: 1019 --EIDYEILVQILAATWLS-DRKKAIENWIENVVLRSFYEVRRK---HHFTAGSVVKLVA 1072
+D +L ++ A W + + ++E W + V+ + +++R + + V L A
Sbjct: 880 SVHVDDGVLDRLAGAAWTAGESATSLEAWADEVLCPTIRQLKRSLSANDVDGATTVSLSA 939
Query: 1073 HEGLLVEEEASGIRLPKIINV 1093
EG G P + V
Sbjct: 940 VEGSGGRRRKDGEVFPTSVTV 960
>gi|357167553|ref|XP_003581219.1| PREDICTED: uncharacterized protein LOC100831510 [Brachypodium
distachyon]
Length = 839
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 134/436 (30%), Positives = 192/436 (44%), Gaps = 64/436 (14%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR +Q L+ E+A V+ AV +AR+R ++Q T LHV SA+L P+ LLR AC R
Sbjct: 1 MRAGGCTVQQALTAEAASVVKQAVSLARRRGNAQVTPLHVASAMLAAPAGLLRAACLRSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVE------------------FPP-ISNSLMA 101
S+ LQ +ALELC VA +RLP+S S +PP +SN+L+A
Sbjct: 61 SH----PLQCKALELCFNVALNRLPASASAVASSPLLLGGHGHSHGHHYYPPSLSNALVA 116
Query: 102 AIKRSQAQQRRNPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSR 161
A KR+QA QRR + QQ +K++L+ V++ILDDP SRV EAGF S
Sbjct: 117 AFKRAQAHQRRG-------SVDTQQQPVLAVKIELEQLVVSILDDPSVSRVMREAGFSST 169
Query: 162 DIKLAIIQ-----PSVTQFPPRLSLTRCPPIFLYNLTDSFPGRAG-LKLPFGPDDVDENC 215
IK + Q + T PPR + P T S P KLP DE+
Sbjct: 170 QIKANVEQTVCSSTAATSAPPRQNPN---PSSSTATTTSKPQETTKAKLPLPGQARDEDV 226
Query: 216 RRIGEVLAGRDEKKGKNPLLVGVCANSA---LKGFVESVNGG----KVGLFPRQIYGLDV 268
+ + LA K + ++V SA ++ V+ V + L Q+ L V
Sbjct: 227 AVVLDCLASSARSK-RRVVVVAESTESAEATVRAVVDKVKKADQSDALPLRGAQVVSLRV 285
Query: 269 VCVEYEINEFVGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTE--- 325
E R++ ++K R G V++ +LK
Sbjct: 286 SSFRDMPREEAERRLSELRCLVK--------SRGHGGHVLLVVEDLKWAAEFWAGRRPGY 337
Query: 326 --AARFVVSQLTSLLKSGNGEK---LWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIH 380
A VV+++ +L G GE+ WL+G +Y+TY K P L++ W LQ L +
Sbjct: 338 YCAVEHVVTEVRALACGGGGEQHALTWLVGFG-TYQTYTKCRTGQPSLESLWGLQTLTVP 396
Query: 381 WKSSLMGSFVPFGGFF 396
SL S F
Sbjct: 397 AGCSLALSLTTCPAAF 412
Score = 63.9 bits (154), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
Query: 678 FDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG----NGRDVGSNSKRGIWLAFLG 733
+ + K L +AL ++V WQ E I+ V + R G + +++K W+ FLG
Sbjct: 581 LNAENLKVLCVALEKEVPWQKEIAPEIASTVLQCRSGISKRRDKSRSTDAKEETWMFFLG 640
Query: 734 PDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLV 793
D GK+K+A LA +VFG+ + + + S S + ++ +
Sbjct: 641 GDVDGKEKVARELANLVFGSHKNFMSIKPAGASSPSASCSTEEHRSKRPRTSAAATGACL 700
Query: 794 DYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ +Y+ P+ V+ LED+++ AD Q ++ +AI TG +V + I +
Sbjct: 701 EQLYEAINENPHRVIILEDIEQ-ADQYSQVAIKEAIDTGVVRSQASDEVGLGDAIVI 756
>gi|449494128|ref|XP_004159457.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101210915
[Cucumis sativus]
Length = 761
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 196/413 (47%), Gaps = 58/413 (14%)
Query: 4 LVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQSYS 63
+ T+ Q LS E+ + A+G+AR+R H+ T LHV SA+ S LLR AC S+
Sbjct: 5 ICTIQLQALSIEAEATVKQAIGLARRRGHAHVTPLHVASAMPASSSGLLRRACLHCHSHP 64
Query: 64 VSPKLQFRALELCLGVAFDRLPSSKSVEF-------PPISNSLMAAIKRSQAQQRRNPDN 116
LQ +ALELC VA +RLP+S P +SN+L+AA KR+QA QRR
Sbjct: 65 ----LQCKALELCFNVALNRLPTSTPSPLFGPQYPNPCLSNALVAAFKRAQAHQRRGSIE 120
Query: 117 YHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAI-----IQPS 171
QQ H QQ LK++L+ +++ILDDP SRV EAGF S +K + ++
Sbjct: 121 NQQQQQHQQQQPILALKIELEQLIISILDDPSVSRVMREAGFSSTQVKNRVEKAVSLEVK 180
Query: 172 VT-QFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIG----EVLAGRD 226
+T + P LS+ N + S P K+P + N E L+ R
Sbjct: 181 ITHKTHPNLSI---------NPSQSIPFTQITKIPSTKQQFENNNEEEVTNVLEELSNRM 231
Query: 227 EKKGK---NPLLVGV---CANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVG 280
K + N ++VG + ++G +E G+V P+++ ++ + + V
Sbjct: 232 NNKMRRVSNTIIVGESLGTVETIVRGVMERFEKGEV---PKELKHVEFLSLPSVSLRNVV 288
Query: 281 GRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVST-----EAARF------ 329
+ +E +L E+ V C G V+ G+LK VS+ S E RF
Sbjct: 289 SKEEIEQKIL---ELRCIVKSCMGKRVIFYLGDLK-WVSEFWSNYCYGEEERRFYSYVEE 344
Query: 330 VVSQLTSLLKSGNGE---KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI 379
++ ++ L+ + N E K W++G A +++ Y+K P LD+ W L L +
Sbjct: 345 LIMEIKRLVNNNNSENYGKFWVLGIA-TFQMYMKCKVGHPSLDSLWSLHPLTV 396
>gi|40253563|dbj|BAD05509.1| 101 kDa heat shock protein; HSP101-like protein [Oryza sativa
Japonica Group]
Length = 1041
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 165/580 (28%), Positives = 254/580 (43%), Gaps = 107/580 (18%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR ++ +Q L+ E+A L A+ A +RRH QTT LHV +ALL P+ LLR+AC R
Sbjct: 1 MRADLSTIQQTLTPEAAAALARAMDEAGRRRHGQTTPLHVAAALLAAPAGLLRQACARAA 60
Query: 61 SYSVSPK--------------LQFRALELCLGVAFDRLPSSKSVEF--------PPISNS 98
S + L RALELC VA DRLP++ + PP+SN+
Sbjct: 61 SAAGVGGGGGAAAGAGAGAHPLHCRALELCFSVALDRLPAAAAAAAAAHGAGASPPVSNA 120
Query: 99 LMAAIKRSQAQQRRN-PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAG 157
L+AA+KR+QAQQRR P+ QQ +KV+L+ VL+ILDDP SRV EA
Sbjct: 121 LVAALKRAQAQQRRGCPE--------AAQQPLLAVKVELEQLVLSILDDPSVSRVMREAS 172
Query: 158 FLSRDIKLAIIQPSVTQFPPRLSLTRCPPIFLYNLT---------DSFPGRAGLKLPF-- 206
F S +K +II+ S++ P CP T S RAG +
Sbjct: 173 FSSAAVK-SIIEQSLSAPSP------CPSAAASTTTAGPGPLSPSPSPLPRAGAANAYLN 225
Query: 207 ------------GPDDVDENCRRIGEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGG 254
G ++ R++ +V+ + +NP+LVG A+ E++
Sbjct: 226 PRLAAAAAVASGGGGGGGDDARKVIDVML---KPTRRNPVLVGDAGPDAV--LKEAIRRI 280
Query: 255 KVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKFKEVESAVGRCSGP--GVVVNYG 312
FP + G V+ +E E+ + G + M + ++ + V R G GVV++ G
Sbjct: 281 PTAGFP-ALAGAKVLPLEAELAKLAGDKA---AMAARIGDLGAVVERLLGEHGGVVLDLG 336
Query: 313 ELKVLVSD--SVSTEAARFVVSQLTSLLKSGNGEKLWLIGAAMSYETYLKMLAKFPGLDN 370
+LK LV + ++E + V+++ LL+ +W + A + TYL+ PG++
Sbjct: 337 DLKWLVDGPAAAASEGGKAAVAEMGRLLRRFGRAGVWAVCTA-ACTTYLRCKVYHPGMEA 395
Query: 371 DWDLQLLPIHWK---------------------SSLMGSFVP-FGGFFSSPPDFKNPV-- 406
+WDL +PI +S MG P +P + P
Sbjct: 396 EWDLHAVPIARGGAPIAAAAAGSALRPGGSGILNSSMGMLSPALRPMPVTPTALRWPPPG 455
Query: 407 --RSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVGT 464
+S + +C LC E+E+A L+ E +D + L +
Sbjct: 456 SDQSPAAKPAMCLLCKGSYERELAK-LEAEQTDKPASRPEAAKPGLPHWLQLSNDQN--- 511
Query: 465 AKAKDDVTALNAKIMELQRKWNDTCQSLHRT-QLVPKLDI 503
KAK+ L EL+RKW +TC +H + P L +
Sbjct: 512 -KAKEQELKLKRSKDELERKWRETCARIHSACPMAPALSV 550
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 189/421 (44%), Gaps = 76/421 (18%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVG 738
D +K L L EKV WQ +A I+ V + R G+G+ ++ +WL F+GPD+ G
Sbjct: 643 DIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKRRNVGTRGDMWLLFVGPDQAG 702
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K+K+ +AL+E++ + + V+ + R+ + + D N+ F GK +D + +
Sbjct: 703 KRKMVNALSELMANTRP--VVVNFGGDSRLGRVGN--DGPNMGFW-----GKTALDRVTE 753
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R P+SV+ LE +D+ D +V + +A+ TG+ DS GR+VS+ +IFV T+ +
Sbjct: 754 AVRQNPFSVIVLEGIDQ-VDVVVHGKIKRAMETGRLPDSRGREVSLGNVIFVLTTNWV-- 810
Query: 859 KHSVHPQTTPVKFSEEIILGAKR--------WQMQTAISHGFADAARGSGMNVKVTPRKE 910
P+ E ++ G +R WQ++ +I
Sbjct: 811 -----PEELKGSNVETLLRGEERMLESTSSSWQLELSIG--------------------- 844
Query: 911 NSNPESRRKRKRTD---DGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTI 967
++ + R D D P K++ S LDLNL A A +DT SD
Sbjct: 845 -----DKQVKHRADWLCDDVRPAKLAKELSSSHGLSLDLNL-AVGALDDTEGSHNSSDVS 898
Query: 968 CE------------NSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFE 1015
E ++ A D + D VF+P++F + + I KF+ G
Sbjct: 899 VEQEQEKGQLAVKRSTPAPGSDILELVDDAIVFRPVDFTPFRKTVTDCISAKFESVMGSS 958
Query: 1016 VLLEIDYEILVQILAATWLSDRKKAIENWIENV----VLRSFYEVRRKHHFTAGSVVKLV 1071
ID + + ++ + WL+D K IE+W E V + R ++ V+ H + S+++L
Sbjct: 959 SSFRIDEDAVDWMVGSVWLTDEK--IEDWAEKVLKPSIERLWHNVK---HDSGRSIIRLT 1013
Query: 1072 A 1072
A
Sbjct: 1014 A 1014
>gi|242061494|ref|XP_002452036.1| hypothetical protein SORBIDRAFT_04g017380 [Sorghum bicolor]
gi|241931867|gb|EES05012.1| hypothetical protein SORBIDRAFT_04g017380 [Sorghum bicolor]
Length = 789
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 161/598 (26%), Positives = 249/598 (41%), Gaps = 126/598 (21%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCV--PSS-------- 50
MR Q L+ E+A VL ++G+AR+R H+Q T LHV LL V PSS
Sbjct: 1 MRAGAYTVHQSLTAEAAAVLKLSLGLARRRGHAQVTPLHVAYTLLGVSEPSSSPRLFTTT 60
Query: 51 ------LLREACDRVQSYSVSPKLQFRALELCLGVAFDRLPSSKSVEF------------ 92
LL AC R +S S + Q RALELC VA +RLP+ + F
Sbjct: 61 TPAYGGLLMRACARSRSQSQTHPAQCRALELCFNVALNRLPTGNAAGFGGSSPSTSFAAS 120
Query: 93 ------PPISNSLMAAIKRSQAQQRRN-----------PDNYHLQQIHCNQQTASLL--K 133
P +SN+L+AA+KR+QA QRR Q +QQ ++L K
Sbjct: 121 LLQQPSPTLSNALVAALKRAQANQRRGCVELQSQPSPPAPGPQPQSTSPSQQQPTMLTIK 180
Query: 134 VDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRLSL------------ 181
V+L +++ILDDP SRV EAGF S +K + + S L L
Sbjct: 181 VELDQLIISILDDPSVSRVMREAGFSSAAVKTNLEEESAAML---LGLGSHHASSTPSSC 237
Query: 182 ----------TRCPPIFLYNLTDSFPGRAG----------------LKLPFGPDDVDENC 215
PP F FP A P +DV
Sbjct: 238 SPAPPPPAAVVVVPPHFFLEPYGGFPAHASGSGALWAAPSLESKSPSPCPCNAEDV---- 293
Query: 216 RRIGEVLAGRDEKKGK-NPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEY- 273
R I EV+ R + + + NP++VG A+ A E + + G P ++ G V+ +
Sbjct: 294 RAILEVMLTRRQGRSRANPVVVGDSASVAEASVAELMRRMERGDVPDELRGARVLRLHLS 353
Query: 274 EINEFVGGRVNVEMMMLKFKE-VESAVGR-CSGPGVVVNYGELKVLV----SDSVSTEAA 327
++ + R +V+ + + V +A G +G G+V+ G+++ V D+ A
Sbjct: 354 HVHVRLMTRADVDAWVADLRRSVGAATGTDNTGAGLVIYVGDMRWAVDSNDDDARGFSPA 413
Query: 328 RFVVSQLTSLL--------KSGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPI 379
+ ++L LL G+G + WL+ AA SY T+++ + L+ WDLQ + +
Sbjct: 414 AHLAAELARLLGELRLRAASHGHGGRAWLVAAA-SYGTFMR--CQRSSLEVTWDLQPVSV 470
Query: 380 ---HWKSSLMGSFVPFGGFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESS 436
L P SSP D K +H + L L +++ + L +
Sbjct: 471 PAGAGGGLLDLELGPRAATASSPADGK-----AAHPAQLPLLDLAPKQEDGVPMPTLCAE 525
Query: 437 DSVTDQCLDNLTSSDRIAALDTSKGV----GTAKAKDDVTALNAKIMELQRKWNDTCQ 490
+ + +N + R A T+ + G +A + T+ +MEL+RKW+ CQ
Sbjct: 526 CA---KYYENEATVVRAKAAGTNLALTFFPGWPQADEPKTSHKDDLMELKRKWSRLCQ 580
>gi|356498707|ref|XP_003518191.1| PREDICTED: uncharacterized protein LOC100807485 [Glycine max]
Length = 867
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 199/444 (44%), Gaps = 69/444 (15%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MRT +Q L+ E+A ++ AV +A++R H+Q T LHV + +L + + LLR AC +Q
Sbjct: 1 MRTGSCAVQQGLTPEAASIVKQAVTLAKRRGHAQVTPLHVANTMLSITNGLLRTAC--LQ 58
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVE-------------FPPISNSLMAAIKRSQ 107
S+ S LQ +ALELC VA +RLP+S S P ISN+L+AA KR+Q
Sbjct: 59 SH--SHPLQCKALELCFNVALNRLPASTSSSPMLQGSHHHHSHACPSISNALVAAFKRAQ 116
Query: 108 AQQRRNPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAI 167
A QRR + QQ +K+ L+ +++ILDDP SRV EAGF S +K +
Sbjct: 117 AHQRRG-------SVENQQQPLLAVKIKLEQLIISILDDPSVSRVMREAGFSSTQVKSNV 169
Query: 168 IQPSVTQFPPRLSLTRCPP---------IFLYNLTDSFPGRAGLKL-PFGPDDVDENCRR 217
Q +SL C ++ G G L P +DV
Sbjct: 170 EQA--------VSLEICSQDNGSGKNNNNSNKAKENNSSGEKGSVLDPIRVEDV------ 215
Query: 218 IGEVLAGRDEKKGKNPLLVGVCANS---ALKGFVESVNGGKVGLFPRQIYGLDVVCVEYE 274
V+ ++ ++ ++VG C S ++G +E V+ G VG + V +
Sbjct: 216 -ASVIENLGSERKRSVVIVGECVTSLEGVVRGVMEKVDKGDVG---DECTLRGVKFISLS 271
Query: 275 INEFVG-GRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEAA------ 327
++ F RV VE + + + + A G V+ G+LK +
Sbjct: 272 LSSFGNVSRVEVEQKVGELRSLVKASEH--SKGYVLYLGDLKWVFDFRARGSQGGGCYCP 329
Query: 328 -RFVVSQLTSLLKS--GNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSS 384
+V ++ L+ NG + W++G A +++ Y++ P L+ W L + I S
Sbjct: 330 VDHMVVEIGKLVNGVEENGARFWVMGVA-TFQAYMRCKNGQPSLETLWGLHPITIP-AGS 387
Query: 385 LMGSFVPFGGFFSSPPDFKNPVRS 408
L S + G + P + K R+
Sbjct: 388 LRLSLITDSGVQNQPTNEKADNRT 411
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 15/182 (8%)
Query: 678 FDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGS---NS---KRGIWLAF 731
+ + KTL AL +KV WQ + I I+ + + R G R G NS K WL F
Sbjct: 610 LNTENLKTLCNALEKKVPWQKDIIPEIASTLLQCRSGMVRRKGKVMRNSEEVKEETWLFF 669
Query: 732 LGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV 791
G D K+KIA LA +VFG++ ++ + +S+ ++ +S D + + R +
Sbjct: 670 QGVDVEAKEKIARELARLVFGSQNDVVSIALSTFAS-TRADSTEDYSR----NKRSREET 724
Query: 792 LVDYI---YQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
YI + P+ V +ED+++ AD Q +AI G+ DS G +V++ I
Sbjct: 725 SCSYIERFAEAMACNPHRVFLVEDIEQ-ADYCSQLGFKRAIERGRVADSKGEEVALCDAI 783
Query: 849 FV 850
+
Sbjct: 784 II 785
>gi|79538220|ref|NP_568849.2| Clp amino terminal domain-containing protein [Arabidopsis thaliana]
gi|8843815|dbj|BAA97363.1| unnamed protein product [Arabidopsis thaliana]
gi|332009468|gb|AED96851.1| Clp amino terminal domain-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 159/588 (27%), Positives = 246/588 (41%), Gaps = 113/588 (19%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MRT +Q L+ E+A VL ++ +AR+R H+Q T LHV + LL +SLLR AC +
Sbjct: 1 MRTGGYTIQQTLTTEAASVLKHSLTLARRRGHAQVTPLHVAATLLSSRTSLLRRACIKSH 60
Query: 61 -----SYSVSPK-------------LQFRALELCLGVAFDRLPSSKSVEF---PPISNSL 99
+Y +P LQ RALELC VA +RLP+ F P ++N+L
Sbjct: 61 PGFSTNYQFAPSRLQHHHHHNQNHPLQCRALELCFNVALNRLPTVPGPMFHGQPSLANAL 120
Query: 100 MAAIKRSQAQQRRNPDNYHLQQIHCNQQTASLL---KVDLKYFVLAILDDPMASRVFGEA 156
+AA+KR+QA QRR Q Q + L KV+L+ V++ILDDP SRV EA
Sbjct: 121 VAALKRAQAHQRRGCIEQQQQTQTHPQTQQTQLLAVKVELEQLVISILDDPSVSRVMREA 180
Query: 157 GFLSRDIKLAIIQPSVTQF-----------PP--------------RLSLTRCPPIFLYN 191
GF S +K + SV+ P RL + P F +
Sbjct: 181 GFNSTAVKSCVEDCSVSSVFYGGSAVGVFSSPNSPDQQQQHHNSINRLHHYQNPKDFNF- 239
Query: 192 LTDSFPGRAGLKLPFGPDD----------VDENCRRIGEV-------LAGRDEKKGKNPL 234
+ +FP L PD +R+ E+ + R + K KNP+
Sbjct: 240 INPNFPLWQTHFLNQSPDQNPLLLSSSASHHHQQQRLREIDLKLVVDVLMRKKTKKKNPV 299
Query: 235 LVGVCANSALKGFVESVNGG-KVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKFK 293
+VG S +GFV + + G + V++ + + E + L K
Sbjct: 300 IVGDSI-SFTEGFVSELMAKLERGEIDQTGELKQTHFVKFHFSPMASKFMRREDVELNIK 358
Query: 294 EVESAVGR--CSGPGVVVNYGELKVLVSD------------SVSTEAARFVVSQLTSLLK 339
E+ V SG ++ G+LK V + S S +V ++ L+
Sbjct: 359 ELRKKVLSLTTSGKNAIIFTGDLKWTVKEITNNNSGGINEISSSYSPLDHLVEEIGKLIT 418
Query: 340 SGNG---------EKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGSFV 390
N K+W++G A S++TY++ + P L+ W L + + ++L S
Sbjct: 419 ECNDDGDDDDCKTRKVWVMGTA-SFQTYMRCQMRQPSLETLWALHPVSVPSSANLGLSLH 477
Query: 391 PFGGFFSSPPDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSS 450
G + N +S S Y +K E+E E+ V C + +TS
Sbjct: 478 ATSGHEARNMSTVNATKSLSGY--------DKAEEE-------ETISHVLSCCPECVTSF 522
Query: 451 DRIA---ALDTSKGVGTAKAKDDVTALNAK--IMELQRKWNDTCQSLH 493
DR A + K + + D + + K +M L+RKWN C++LH
Sbjct: 523 DREAKSLKANQDKLLPSWLQSHDADSSSQKDELMGLKRKWNRFCETLH 570
>gi|115475559|ref|NP_001061376.1| Os08g0250900 [Oryza sativa Japonica Group]
gi|113623345|dbj|BAF23290.1| Os08g0250900, partial [Oryza sativa Japonica Group]
Length = 972
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 189/421 (44%), Gaps = 76/421 (18%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVG 738
D +K L L EKV WQ +A I+ V + R G+G+ ++ +WL F+GPD+ G
Sbjct: 574 DIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKRRNVGTRGDMWLLFVGPDQAG 633
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K+K+ +AL+E++ + + V+ + R+ + + D N+ F GK +D + +
Sbjct: 634 KRKMVNALSELMANTRP--VVVNFGGDSRLGRVGN--DGPNMGFW-----GKTALDRVTE 684
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R P+SV+ LE +D+ D +V + +A+ TG+ DS GR+VS+ +IFV T+ +
Sbjct: 685 AVRQNPFSVIVLEGIDQ-VDVVVHGKIKRAMETGRLPDSRGREVSLGNVIFVLTTNWV-- 741
Query: 859 KHSVHPQTTPVKFSEEIILGAKR--------WQMQTAISHGFADAARGSGMNVKVTPRKE 910
P+ E ++ G +R WQ++ +I
Sbjct: 742 -----PEELKGSNVETLLRGEERMLESTSSSWQLELSIG--------------------- 775
Query: 911 NSNPESRRKRKRTD---DGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTI 967
++ + R D D P K++ S LDLNL A A +DT SD
Sbjct: 776 -----DKQVKHRADWLCDDVRPAKLAKELSSSHGLSLDLNL-AVGALDDTEGSHNSSDVS 829
Query: 968 CE------------NSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFE 1015
E ++ A D + D VF+P++F + + I KF+ G
Sbjct: 830 VEQEQEKGQLAVKRSTPAPGSDILELVDDAIVFRPVDFTPFRKTVTDCISAKFESVMGSS 889
Query: 1016 VLLEIDYEILVQILAATWLSDRKKAIENWIENV----VLRSFYEVRRKHHFTAGSVVKLV 1071
ID + + ++ + WL+D K IE+W E V + R ++ V+ H + S+++L
Sbjct: 890 SSFRIDEDAVDWMVGSVWLTDEK--IEDWAEKVLKPSIERLWHNVK---HDSGRSIIRLT 944
Query: 1072 A 1072
A
Sbjct: 945 A 945
Score = 119 bits (298), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 214/499 (42%), Gaps = 93/499 (18%)
Query: 68 LQFRALELCLGVAFDRLPSSKSVEF--------PPISNSLMAAIKRSQAQQRRN-PDNYH 118
L RALELC VA DRLP++ + PP+SN+L+AA+KR+QAQQRR P+
Sbjct: 13 LHCRALELCFSVALDRLPAAAAAAAAAHGAGASPPVSNALVAALKRAQAQQRRGCPE--- 69
Query: 119 LQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPR 178
QQ +KV+L+ VL+ILDDP SRV EA F S +K +II+ S++ P
Sbjct: 70 -----AAQQPLLAVKVELEQLVLSILDDPSVSRVMREASFSSAAVK-SIIEQSLSAPSP- 122
Query: 179 LSLTRCPPIFLYNLT---------DSFPGRAGLKLPF--------------GPDDVDENC 215
CP T S RAG + G ++
Sbjct: 123 -----CPSAAASTTTAGPGPLSPSPSPLPRAGAANAYLNPRLAAAAAVASGGGGGGGDDA 177
Query: 216 RRIGEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEI 275
R++ +V+ + +NP+LVG A+ E++ FP + G V+ +E E+
Sbjct: 178 RKVIDVML---KPTRRNPVLVGDAGPDAV--LKEAIRRIPTAGFP-ALAGAKVLPLEAEL 231
Query: 276 NEFVGGRVNVEMMMLKFKEVESAVGRCSGP--GVVVNYGELKVLVSD--SVSTEAARFVV 331
+ G + M + ++ + V R G GVV++ G+LK LV + ++E + V
Sbjct: 232 AKLAGDKA---AMAARIGDLGAVVERLLGEHGGVVLDLGDLKWLVDGPAAAASEGGKAAV 288
Query: 332 SQLTSLLKSGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWK--------- 382
+++ LL+ +W + A + TYL+ PG++ +WDL +PI
Sbjct: 289 AEMGRLLRRFGRAGVWAVCTA-ACTTYLRCKVYHPGMEAEWDLHAVPIARGGAPIAAAAA 347
Query: 383 ------------SSLMGSFVP-FGGFFSSPPDFKNPV----RSKSHYSTLCYLCTEKLEQ 425
+S MG P +P + P +S + +C LC E+
Sbjct: 348 GSALRPGGSGILNSSMGMLSPALRPMPVTPTALRWPPPGSDQSPAAKPAMCLLCKGSYER 407
Query: 426 EVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKW 485
E+A L+ E +D + L + KAK+ L EL+RKW
Sbjct: 408 ELAK-LEAEQTDKPASRPEAAKPGLPHWLQLSNDQN----KAKEQELKLKRSKDELERKW 462
Query: 486 NDTCQSLHRT-QLVPKLDI 503
+TC +H + P L +
Sbjct: 463 RETCARIHSACPMAPALSV 481
>gi|125602736|gb|EAZ42061.1| hypothetical protein OsJ_26621 [Oryza sativa Japonica Group]
Length = 733
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 189/421 (44%), Gaps = 76/421 (18%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVG 738
D +K L L EKV WQ +A I+ V + R G+G+ ++ +WL F+GPD+ G
Sbjct: 335 DIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKRRNVGTRGDMWLLFVGPDQAG 394
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K+K+ +AL+E++ + + V+ + R+ + + D N+ F GK +D + +
Sbjct: 395 KRKMVNALSELMANTRP--VVVNFGGDSRLGRVGN--DGPNMGFW-----GKTALDRVTE 445
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R P+SV+ LE +D+ D +V + +A+ TG+ DS GR+VS+ +IFV T+ +
Sbjct: 446 AVRQNPFSVIVLEGIDQ-VDVVVHGKIKRAMETGRLPDSRGREVSLGNVIFVLTTNWV-- 502
Query: 859 KHSVHPQTTPVKFSEEIILGAKR--------WQMQTAISHGFADAARGSGMNVKVTPRKE 910
P+ E ++ G +R WQ++ +I
Sbjct: 503 -----PEELKGSNVETLLRGEERMLESTSSSWQLELSIG--------------------- 536
Query: 911 NSNPESRRKRKRTD---DGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTI 967
++ + R D D P K++ S LDLNL A A +DT SD
Sbjct: 537 -----DKQVKHRADWLCDDVRPAKLAKELSSSHGLSLDLNL-AVGALDDTEGSHNSSDVS 590
Query: 968 CE------------NSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFE 1015
E ++ A D + D VF+P++F + + I KF+ G
Sbjct: 591 VEQEQEKGQLAVKRSTPAPGSDILELVDDAIVFRPVDFTPFRKTVTDCISAKFESVMGSS 650
Query: 1016 VLLEIDYEILVQILAATWLSDRKKAIENWIENV----VLRSFYEVRRKHHFTAGSVVKLV 1071
ID + + ++ + WL+D K IE+W E V + R ++ V+ H + S+++L
Sbjct: 651 SSFRIDEDAVDWMVGSVWLTDEK--IEDWAEKVLKPSIERLWHNVK---HDSGRSIIRLT 705
Query: 1072 A 1072
A
Sbjct: 706 A 706
>gi|357142263|ref|XP_003572512.1| PREDICTED: uncharacterized protein LOC100838396 [Brachypodium
distachyon]
Length = 720
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 193/435 (44%), Gaps = 78/435 (17%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLC-------------- 46
MR Q L+ E+A V+ ++ +AR+R H+Q T LHV LL
Sbjct: 1 MRAGGYTVHQSLTAEAAAVVKMSLALARRRGHAQVTPLHVAFTLLTGSSSPSSAHHHQQP 60
Query: 47 -----VPSSLLREACDRVQSYSVSPKLQFRALELCLGVAFDRLPSSKS------------ 89
LLR AC V+S+S LQ RALELC VA +RLP++ +
Sbjct: 61 ALSSSYAHGLLRRAC--VKSHS----LQCRALELCFNVALNRLPTTDAGCSPPSSSLSAS 114
Query: 90 ----VEFPPISNSLMAAIKRSQAQQRRNPDNYHLQQIHCNQQTASL----LKVDLKYFVL 141
P +SN+L+AA+KR+QA QRR Q +KV+L V+
Sbjct: 115 IIHQFNNPTLSNALVAALKRAQANQRRGCIELQSQLPPPPPTEQQQPLVAIKVELDQLVV 174
Query: 142 AILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFP--------PRLSLTRCPPIFLYNLT 193
+ILDDP SRV EAGF S +K I + S + ++L R P F
Sbjct: 175 SILDDPSVSRVMREAGFSSAAVKSNIEEESASMLAHHHHHHQSASVALIR-PHFFNEPHI 233
Query: 194 DSFPGRAGLKLPF---GPDDV------DENCRRIGEVLAGRD-EKKGKNPLLVG---VCA 240
FP G PF PD V +E+ R I E + + ++ NP++VG A
Sbjct: 234 LDFPTNGGFGTPFSNQAPDGVVGSSCKEEDVRAILEAMMRKQGGRRRANPVVVGDTASVA 293
Query: 241 NSALKGFVESVNGGKVGLFPRQIYGLDVVCVEYEINEFVGGRVNVEMMMLKFKEVESAVG 300
+++ + ++ G V P ++ G V+ + ++ ++ + L+ + ++
Sbjct: 294 EASVGQLMRRLDRGDV--LPDELRGARVLRLHHQPRFMTRADLDASVADLRRRSADATA- 350
Query: 301 RCSGPGVVVNYGELKVLVSDSVSTEAARFVVSQLTSLLKSGNGEKLWLIGAAMSYETYLK 360
GV++ G+++ V D+ E +++L L + + WL+ AA SY+TY++
Sbjct: 351 -----GVIIYVGDIRWAVDDAGLAEHMAAELARLQGELMAARRGRAWLVAAA-SYKTYMR 404
Query: 361 MLAKFPGLDNDWDLQ 375
+ L+ W+LQ
Sbjct: 405 --CRGSPLEAAWELQ 417
>gi|125560773|gb|EAZ06221.1| hypothetical protein OsI_28463 [Oryza sativa Indica Group]
Length = 682
Score = 123 bits (309), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 189/421 (44%), Gaps = 76/421 (18%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVG 738
D +K L L EKV WQ +A I+ V + R G+G+ ++ +WL F+GPD+ G
Sbjct: 284 DIESFKRLLKGLTEKVSWQSDAASAIAAVVIQCRSGSGKRRNVGTRGDMWLLFVGPDQAG 343
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K+K+ +AL+E++ + + V+ + R+ + + D N+ F GK +D + +
Sbjct: 344 KRKMVNALSELMANTRP--VVVNFGGDSRLGRVGN--DGPNMGFW-----GKTALDRVTE 394
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R P+SV+ LE +D+ D +V + +A+ TG+ DS GR+VS+ +IFV T+ +
Sbjct: 395 AVRQNPFSVIVLEGIDQ-VDVVVHGKIKRAMETGRLPDSRGREVSLGNVIFVLTTNWV-- 451
Query: 859 KHSVHPQTTPVKFSEEIILGAKR--------WQMQTAISHGFADAARGSGMNVKVTPRKE 910
P+ E ++ G +R WQ++ +I
Sbjct: 452 -----PEELKGSNVETLLRGEERMLESTSSSWQLELSIG--------------------- 485
Query: 911 NSNPESRRKRKRTD---DGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSDTI 967
++ + R D D P K++ S LDLNL A A +DT SD
Sbjct: 486 -----DKQVKHRADWLCDDVRPAKLAKELSSSHGLSLDLNL-AVGALDDTEGSHNSSDVS 539
Query: 968 CE------------NSGAWLEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFE 1015
E ++ A D + D VF+P++F + + I KF+ G
Sbjct: 540 VEQEQEKGQLAVKRSTPAPGSDILELVDDAIVFRPVDFTPFRKTVTDCISAKFESVMGSS 599
Query: 1016 VLLEIDYEILVQILAATWLSDRKKAIENWIENV----VLRSFYEVRRKHHFTAGSVVKLV 1071
ID + + ++ + WL+D K IE+W E V + R ++ V+ H + S+++L
Sbjct: 600 SSFRIDEDAVDWMVGSVWLTDEK--IEDWAEKVLKPSIERLWHNVK---HDSGRSIIRLT 654
Query: 1072 A 1072
A
Sbjct: 655 A 655
>gi|242073028|ref|XP_002446450.1| hypothetical protein SORBIDRAFT_06g016210 [Sorghum bicolor]
gi|241937633|gb|EES10778.1| hypothetical protein SORBIDRAFT_06g016210 [Sorghum bicolor]
Length = 874
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 105/185 (56%), Gaps = 27/185 (14%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR +Q L+ E+A V+ AV +AR+R ++Q T LHV SA+L P+ LLR AC R
Sbjct: 1 MRAGGCTVQQSLTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLAAPAGLLRAACLRSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVE---------------FPP-ISNSLMAAIK 104
S+ LQ +ALELC VA +RLP+S +V +PP +SN+L+AA K
Sbjct: 61 SH----PLQCKALELCFNVALNRLPASAAVASSPLLGGHGHGHHHYYPPSLSNALVAAFK 116
Query: 105 RSQAQQRRNPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIK 164
R+QA QRR + QQ +K++L+ V++ILDDP SRV EAGF S +K
Sbjct: 117 RAQAHQRRG-------SVESQQQPVLAVKIELEQLVVSILDDPSVSRVMREAGFSSTQVK 169
Query: 165 LAIIQ 169
+ Q
Sbjct: 170 ANVEQ 174
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 9/184 (4%)
Query: 682 DYKTLRIALAEKVGWQDEAICTISQAVSRWRIG----NGRDVGSNSKRGIWLAFLGPDKV 737
+ K L AL ++V WQ E + I+ AV + R G + +++K W+ FLG D
Sbjct: 612 NLKVLCGALEKEVPWQKEIVPEIASAVLQCRSGIAKRRDKSRSADAKEETWMFFLGGDAD 671
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDY-- 795
GK+K+A LA +VFG++ + + S P + + K R ++ Y
Sbjct: 672 GKEKVARELASLVFGSRNSFVSIRPGGGASASSPPPPAAASSEEHHRSK-RPRMAAAYLE 730
Query: 796 -IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
+++ P+ V+F+ED+++ AD Q + +AI +G + G +V + I + +
Sbjct: 731 RLHEAVSENPHRVIFMEDVER-ADRDCQLGIKEAIESGVVRNHAGEEVGVGDAIVILSCE 789
Query: 855 ILKG 858
G
Sbjct: 790 SFDG 793
>gi|224097580|ref|XP_002310995.1| predicted protein [Populus trichocarpa]
gi|222850815|gb|EEE88362.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 123 bits (308), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 106/192 (55%), Gaps = 26/192 (13%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR + +Q L+ E+ ++ AV +AR+R H+Q T LHV S +L + LLR AC +
Sbjct: 1 MRAGICSVQQTLTPEAVSLVKQAVSLARRRGHAQVTPLHVASTMLASSTGLLRRACLQAH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKS-------VEFPPISNSLMAAIKRSQAQQRRN 113
S+ LQ +ALELC VA +RLP+S S +P +SN+L+AA KR+QA QRR
Sbjct: 61 SHP----LQCKALELCFNVALNRLPASTSSALLGPHSSYPSLSNALVAAFKRAQAHQRRG 116
Query: 114 PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVT 173
I QQ LK++++ +++ILDDP SRV EAGF S +K + Q
Sbjct: 117 -------SIENQQQPILALKIEIEQLIISILDDPSVSRVMREAGFSSTQVKNKVEQA--- 166
Query: 174 QFPPRLSLTRCP 185
+SL CP
Sbjct: 167 -----VSLEICP 173
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 678 FDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGS----NSKRGIWLAFLG 733
F+ + K LR L +KV WQ + I I+ + R G + G +K WL FLG
Sbjct: 474 FNDYNLKNLRSGLEKKVPWQKDIIPEIATTILECRSGMRKRKGKLNHIENKAETWLFFLG 533
Query: 734 PDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLV 793
D GK+KIA LA +VFG++ + + +S+ S+ +S + +N + R ++
Sbjct: 534 VDFEGKEKIARELARLVFGSQSNFVSIGLSNFSS-SRADSTEESKNK-----RARDELGC 587
Query: 794 DYIYQ---EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
Y+ + + V F+ED+D D Q + +AI G T G +V + I V
Sbjct: 588 SYLERLGLALNENSHRVFFMEDVD-GVDNCSQKGIKQAIENGSVTLPDGENVPLKDAIIV 646
>gi|413918279|gb|AFW58211.1| hypothetical protein ZEAMMB73_670982 [Zea mays]
Length = 862
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 105/186 (56%), Gaps = 28/186 (15%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR +Q L+ E+A V+ AV +AR+R ++Q T LHV SA+L P+ LLR AC R
Sbjct: 1 MRAGGCTVQQSLTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLAAPTGLLRAACLRSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVE----------------FPP-ISNSLMAAI 103
S+ LQ +ALELC VA +RLP+S +V +PP +SN+L+AA
Sbjct: 61 SH----PLQCKALELCFNVALNRLPASAAVASSPLLGGHGHHHHHHYYPPSLSNALVAAF 116
Query: 104 KRSQAQQRRNPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDI 163
KR+QA QRR + QQ +K++L+ V++ILDDP SRV EAGF S +
Sbjct: 117 KRAQAHQRRG-------SVESQQQPVLAVKIELEQLVVSILDDPSVSRVMREAGFSSTQV 169
Query: 164 KLAIIQ 169
K + Q
Sbjct: 170 KANVEQ 175
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 87/193 (45%), Gaps = 30/193 (15%)
Query: 678 FDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG----NGRDVGSNSKRGIWLAFLG 733
+ + K L AL ++V WQ E + ++ AV + R G + +++K W+ FLG
Sbjct: 592 LNAENLKLLCGALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDKSRSADAKEETWMLFLG 651
Query: 734 PDKVGKKKIASALAEIVFGNKGKLIHV----------------DVSSEQRVSQPNSIFDC 777
D GK+++A LA +VFG + + + S R S+ + +
Sbjct: 652 GDADGKERVARELARLVFGLRSSFLSIRPGGVVSASSPPPASSGSSEGHRSSKRPRMPEE 711
Query: 778 QNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDS 837
+ + ++ +++ P+ V+F+ED+++ AD Q + +AI +G +
Sbjct: 712 EPAAY---------YLERLHEAVSENPHRVIFMEDVER-ADRDCQLRIKEAIESGVVRNH 761
Query: 838 YGRDVSISGMIFV 850
G++V + I +
Sbjct: 762 AGQEVGVGDAIVI 774
>gi|38344035|emb|CAE01527.2| OJ991214_12.16 [Oryza sativa Japonica Group]
gi|39545713|emb|CAD40931.3| OSJNBa0033G16.3 [Oryza sativa Japonica Group]
Length = 877
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 108/198 (54%), Gaps = 32/198 (16%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR +Q L+ E+A V+ AV +AR+R ++Q T LHV SA+L P LLR AC R
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVTLARRRGNAQVTPLHVASAMLAPPGGLLRAACLRSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVE----------------FPP-ISNSLMAAI 103
S+ LQ +ALELC VA +RLP+S +V +PP +SN+L+AA
Sbjct: 61 SH----PLQCKALELCFNVALNRLPASAAVASSPLLGGHGHGHHGHYYPPSLSNALVAAF 116
Query: 104 KRSQAQQRRNPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDI 163
KR+QA QRR + QQ +K++L+ V++ILDDP SRV EAGF S +
Sbjct: 117 KRAQAHQRRG-------SVETQQQPVLAVKIELEQLVVSILDDPSVSRVMREAGFSSTQV 169
Query: 164 KLAIIQP----SVTQFPP 177
K + Q + T PP
Sbjct: 170 KANVEQACSTTTATSAPP 187
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 27/190 (14%)
Query: 678 FDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG----NGRDVGSNSKRGIWLAFLG 733
+ + K L AL ++V WQ E + ++ AV + R G R + +K WL FLG
Sbjct: 612 LNAENLKLLCAALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDRSRSTEAKEETWLFFLG 671
Query: 734 PDKVGKKKIASALAEIVFGNKGKLIHVDVSS-------------EQRVSQPNSIFDCQNI 780
D GK+++A LA +VFG++ + V + + R +P +
Sbjct: 672 GDGHGKERVARELAGLVFGSRKSFLSVKLGASSSSPSASGSTEDHHRSKRPRTTTTSSA- 730
Query: 781 DFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGR 840
+ ++ +Y P+ V+ +ED+++ D Q + +AI G G
Sbjct: 731 --------SEAYLERLYDAVSENPHRVILIEDVEQ-GDHRWQVGVKEAIDRGVLRSQAGD 781
Query: 841 DVSISGMIFV 850
+V + I +
Sbjct: 782 EVGVGDAIII 791
>gi|116310805|emb|CAH67595.1| OSIGBa0092M08.7 [Oryza sativa Indica Group]
gi|218194827|gb|EEC77254.1| hypothetical protein OsI_15844 [Oryza sativa Indica Group]
Length = 876
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 108/198 (54%), Gaps = 32/198 (16%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR +Q L+ E+A V+ AV +AR+R ++Q T LHV SA+L P LLR AC R
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVTLARRRGNAQVTPLHVASAMLAPPGGLLRAACLRSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVE----------------FPP-ISNSLMAAI 103
S+ LQ +ALELC VA +RLP+S +V +PP +SN+L+AA
Sbjct: 61 SH----PLQCKALELCFNVALNRLPASAAVASSPLLGGHGHGHHGHYYPPSLSNALVAAF 116
Query: 104 KRSQAQQRRNPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDI 163
KR+QA QRR + QQ +K++L+ V++ILDDP SRV EAGF S +
Sbjct: 117 KRAQAHQRRG-------SVETQQQPVLAVKIELEQLVVSILDDPSVSRVMREAGFSSTQV 169
Query: 164 KLAIIQP----SVTQFPP 177
K + Q + T PP
Sbjct: 170 KANVEQACSTTTATSAPP 187
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 27/190 (14%)
Query: 678 FDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG----NGRDVGSNSKRGIWLAFLG 733
+ + K L AL ++V WQ E + ++ AV + R G R + +K WL FLG
Sbjct: 611 LNAENLKLLCAALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDRSRSTEAKEETWLFFLG 670
Query: 734 PDKVGKKKIASALAEIVFGNKGKLIHVDVSS-------------EQRVSQPNSIFDCQNI 780
D GK+++A LA +VFG++ + V + + R +P +
Sbjct: 671 GDAHGKERVARELAGLVFGSRKSFLSVKLGASSSSPSASGSTEDHHRSKRPRTTTRSSA- 729
Query: 781 DFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGR 840
+ ++ +Y P+ V+ +ED+++ D Q + +AI G G
Sbjct: 730 --------SEAYLERLYDAVSENPHRVILIEDVEQ-GDHRWQVGVKEAIDRGVLRSQAGD 780
Query: 841 DVSISGMIFV 850
+V + I +
Sbjct: 781 EVGVGDAIII 790
>gi|224140034|ref|XP_002323392.1| predicted protein [Populus trichocarpa]
gi|222868022|gb|EEF05153.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 102/172 (59%), Gaps = 19/172 (11%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR +Q L+ E+A V+ AV +AR+R H+Q T LHV + +L + LLR AC +Q
Sbjct: 1 MRAGGCTVQQALTAEAASVIKQAVTLARRRGHAQVTPLHVANTMLSASTGLLRTAC--LQ 58
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSV--------EFPPISNSLMAAIKRSQAQQRR 112
S+ S LQ +ALELC VA +RLP+S S +FP ISN+L+AA KR+QA QRR
Sbjct: 59 SH--SHPLQCKALELCFNVALNRLPTSTSSPMIGTPSQQFPSISNALVAAFKRAQAHQRR 116
Query: 113 NPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIK 164
I QQ +K++L+ +++ILDDP SRV EAGF S +K
Sbjct: 117 G-------SIENQQQPLLAVKIELEQLMISILDDPSVSRVMREAGFSSTQVK 161
>gi|357143344|ref|XP_003572888.1| PREDICTED: chaperone protein ClpB-like [Brachypodium distachyon]
Length = 962
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 181/403 (44%), Gaps = 75/403 (18%)
Query: 15 ESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQSYSVSPKLQFRALE 74
++A VL A G A +RRH+ TT LH +ALL P+ LLR+AC + L+ RAL+
Sbjct: 28 DAAAVLSRAAGDASRRRHAHTTPLHAAAALLSGPAPLLRDAC--AAGLASPHPLRCRALD 85
Query: 75 LCLGVAFDRLPSSKSVEF----------PPISNSLMAAIKRSQAQQRRNPDNYHLQQIHC 124
LC VA DRLP+S + PP+SN+L AA+KR+ A RR H
Sbjct: 86 LCFAVALDRLPTSSPSDSGCFHGGAPLPPPLSNALSAALKRAYAHHRRIGGEAAAGDDH- 144
Query: 125 NQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRLSLTRC 184
+V + + VLAILDDP +RV EA F S +K A+++ +
Sbjct: 145 --------RVGVPHLVLAILDDPSVARVMREASFSSTAVKAAMLRSLSDPDHSSAFSSTT 196
Query: 185 PPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEKKGKNPLLVGVCANSAL 244
L++ R + DE ++ +VL R K +NP+LVG A+
Sbjct: 197 TSTRLHH-------RQWQDSSSSSSNRDEEVAKVVQVLK-RSNK--RNPVLVGDTAD--- 243
Query: 245 KGFVESVNGGKVGLFPRQIYG-LDVVCVEYEINEFVGGRVNVEMMMLKFKEVESAVGRCS 303
V++V V + RQ G V+ + E+ G ++ ++ K +E+ A+
Sbjct: 244 ---VDAVVQEVVTMIQRQRLGNARVISLPQEL-----GDLDRSDLVGKIRELGEAIRSSE 295
Query: 304 GP---GVVVNYGELKVLV--------SDSVSTE-----------AARFVVSQLTSLLK-- 339
+VVN G L+ LV D+V E AR V+++ +L+
Sbjct: 296 AALSQSIVVNLGNLEWLVEERRHVGFGDAVDQEEAAKRREVVLDTARAAVAEMARVLEQC 355
Query: 340 -------SGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQ 375
G ++W+IG A + TY+K P L++ WD+Q
Sbjct: 356 GSGSGEGVGERRRVWMIGTA-TCATYVKCQVHHPALESQWDIQ 397
Score = 45.8 bits (107), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 23/167 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
LAE V WQ EA ++ +++ + W+ F GPD GK+++A AL+
Sbjct: 578 LAEAVTWQPEAAAAVASTIAK-------ARRAKGAADTWVLFAGPDAEGKRRMAEALSVS 630
Query: 750 VFGNKGKLIHVDVSSEQRV--SQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSV 807
VFG + + S V + SI D + + R+ P+ V
Sbjct: 631 VFGAAAVTVRLASSCSAGVDANGGESIVSSWTAPA----------RDRVAEAARANPFRV 680
Query: 808 VFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
V L+ LD AD +V++++ +A +G+ DS G G IFV S+
Sbjct: 681 VVLDGLDH-ADDLVRAAVARAAESGRLADSRGLG---GGAIFVVMSS 723
>gi|449437858|ref|XP_004136707.1| PREDICTED: uncharacterized protein LOC101217335 [Cucumis sativus]
Length = 757
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 193/436 (44%), Gaps = 85/436 (19%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MRT +Q L+ E+ V+ AV +A++R H+Q T LHV S +L P+ LLR AC +Q
Sbjct: 1 MRTGGCTVQQALTCEALNVVKQAVILAKRRGHAQVTPLHVASTMLSPPTGLLRTAC--LQ 58
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEFPPI----------------SNSLMAAIK 104
S+ S LQ +ALELC VA +RLP+S S PPI SN+L+AA K
Sbjct: 59 SH--SHPLQCKALELCFNVALNRLPASNST--PPILTPSSHHHHHQSHPSISNALVAAFK 114
Query: 105 RSQAQQRRNPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIK 164
R+QA QRR I QQ +K++L+ +++ILDDP SRV EA F S +K
Sbjct: 115 RAQAHQRRG-------SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREARFSSTQVK 167
Query: 165 LAI-----IQPSVTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIG 219
+ I+ + T L + GRA +E+ I
Sbjct: 168 TKVEQAISIEHNTTPASNNNDDNSNNNTTLLGGATTTSGRAR----------EED---IA 214
Query: 220 EVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYG---LDVVCVEYEIN 276
V+ E K ++ ++VG C G VE V +G ++ +V + I+
Sbjct: 215 AVINELAEMKKRSLVVVGECV-----GNVECVVEAAIGRVEKKEVPECLKEVKFINLSIS 269
Query: 277 EFVG-GRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVS---------------- 319
F R+ V+ +++ K + + C G GV++ G++K +
Sbjct: 270 SFRDRSRIEVDEKVMELKSLIRS-NYCIGKGVILYVGDIKWSIDYRENYYYHSSNQRRGY 328
Query: 320 ----DSVSTEAARFVVSQLTSLLKS--GNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWD 373
+ + E + V + G G +W++G A +++TY++ P L+
Sbjct: 329 YCPVEHMIMELGKLVYGNYDQQIHQPKGGGVNVWIMGIA-TFQTYMRCKTGNPSLET--- 384
Query: 374 LQLLPIHWKSSLMGSF 389
LL IH + GSF
Sbjct: 385 --LLAIHPLTIPTGSF 398
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 678 FDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVG----SNSKRGIWLAFLG 733
+ ++K L AL +KV WQ + I+ AV + R G GR G + K WL F G
Sbjct: 492 LNSENFKRLCNALEKKVPWQKNVVGDIASAVLQCRSGMGRRKGKMGHGDFKEETWLLFQG 551
Query: 734 PDKVGKKKIASALAEIVFGN-KGKLIHVDVSSEQRVSQPNSIFD-CQNI---DFCDCKLR 788
D GK+K+A LA ++FG+ L+ + +SS +S D C+N D C
Sbjct: 552 NDLRGKEKVAEELARVIFGSATSNLVSITLSSFSSTRSADSTEDNCRNKRSRDEQSCS-- 609
Query: 789 GKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
++ + P+ V +ED+++ AD Q +AI G+ T+S G+ VS++ I
Sbjct: 610 ---YLERFAEAVSINPHRVFLVEDVEQ-ADYSSQMGFKRAIEGGRITNSDGQQVSLADSI 665
Query: 849 FV 850
+
Sbjct: 666 VI 667
>gi|356532692|ref|XP_003534905.1| PREDICTED: uncharacterized protein LOC100785754 [Glycine max]
Length = 1051
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 105/174 (60%), Gaps = 11/174 (6%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREAC---- 56
MR+ +Q L+ E+A VL ++G+AR+R H+Q T LHV + LL + +S LR AC
Sbjct: 1 MRSGACTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLTLRASSLRRACLKSQ 60
Query: 57 DRVQSYSVSPKLQFRALELCLGVAFDRLPSSKSVEF---PPISNSLMAAIKRSQAQQRRN 113
+ Q++S P LQ RALELC VA +RLP++ P +SN+L+AA+KR+QA QRR
Sbjct: 61 PQTQTHSHHP-LQCRALELCFNVALNRLPTTPGPLLHTQPSLSNALIAALKRAQAHQRRG 119
Query: 114 PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAI 167
QQ T +KV+L+ +++ILDDP SRV EAGF S +K I
Sbjct: 120 CIEQQQQQQQPPLLT---IKVELEQLIISILDDPSVSRVMREAGFSSTVVKSNI 170
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 116/292 (39%), Gaps = 60/292 (20%)
Query: 684 KTLRIA-----LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKR---GIWLAFLGPD 735
+TLR A L E V WQ E I +I++A+ V S S + WL G D
Sbjct: 666 RTLRRAHICKLLQENVPWQSETIPSIAEAL----------VDSKSAKQSSTTWLLLQGTD 715
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDY 795
+GK ++A A+AE VFG+ L+H+D+ ++ NS D
Sbjct: 716 SIGKTRLARAIAESVFGSVDFLLHLDMLKNN--NKENS-------------------ADI 754
Query: 796 IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ +S VV +E LD AD + L T KF + + S IF+ T+
Sbjct: 755 VAGALKSHEKVVVLIESLD-FADAQFRKFLADGFETAKFGNLSMNEKSSGQAIFILTNGD 813
Query: 856 LKGKHSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGM--NVKVTPRKENSN 913
+ + +K +I K ++ S G A + NVK +PR
Sbjct: 814 TRSNEEKKTNNSVMKLVLQIS-ETKPSLESSSPSLGQKRRAEVLDLFTNVK-SPR----- 866
Query: 914 PESRRKRKRTDDGDSPINSQKQVDDSFRSYLDLNLPADEAEEDTSSEKFDSD 965
E + + K+ S N+ LDLN+ ADE E+D S SD
Sbjct: 867 VEEKEEGKKVFSRHSSFNN-----------LDLNMKADEEEDDDGSSPISSD 907
Score = 43.5 bits (101), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 49/240 (20%)
Query: 282 RVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSVSTEA--------------A 327
R VEM + K +V G G + G+LK V S +
Sbjct: 317 RDEVEMSLSALKRKVDSVVVSGGGGAIFYVGDLKWTVELGTSEKEEGGDVCGYNYYYNPV 376
Query: 328 RFVVSQLTSLL-KSGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSSLM 386
+V+++ L S N K+WL+ A SY+TY++ + P L+ W LQ +P
Sbjct: 377 DHLVAEIGKLFCDSNNTTKVWLLATA-SYQTYMRCQMRQPPLETQWSLQAVP-------- 427
Query: 387 GSFVPFGGF-----FSSPPDFKNPV-RSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVT 440
VP GG SS D K + ++ S+ ++K EQ+ KL
Sbjct: 428 ---VPSGGLGLSLHASSVHDSKMTISQNPSNMMETKLFSSKKEEQD-----KLNC----- 474
Query: 441 DQCLDNLTSSDRIAAL--DTSKGVGTAKAKDDVTALNAK--IMELQRKWNDTCQSLHRTQ 496
C + +S ++ A L K + + + T + K + +L+RKWN C LH+++
Sbjct: 475 --CEECASSYEKEAQLFKPGQKKLLPSWLQSHTTEAHQKDELAQLKRKWNRLCHCLHQSK 532
>gi|449527911|ref|XP_004170951.1| PREDICTED: chaperone protein ClpB1-like, partial [Cucumis sativus]
Length = 405
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 193/436 (44%), Gaps = 85/436 (19%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MRT +Q L+ E+ V+ AV +A++R H+Q T LHV S +L P+ LLR AC +Q
Sbjct: 1 MRTGGCTVQQALTCEALNVVKQAVILAKRRGHAQVTPLHVASTMLSPPTGLLRTAC--LQ 58
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEFPPI----------------SNSLMAAIK 104
S+ S LQ +ALELC VA +RLP+S S PPI SN+L+AA K
Sbjct: 59 SH--SHPLQCKALELCFNVALNRLPASNST--PPILTPSSHHHHHQSHPSISNALVAAFK 114
Query: 105 RSQAQQRRNPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIK 164
R+QA QRR I QQ +K++L+ +++ILDDP SRV EA F S +K
Sbjct: 115 RAQAHQRRG-------SIENQQQPLLAVKIELEQLIISILDDPSVSRVMREARFSSTQVK 167
Query: 165 LAI-----IQPSVTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGPDDVDENCRRIG 219
+ I+ + T L + GRA +E+ I
Sbjct: 168 TKVEQAISIEHNTTPASNNNDDNSNNNTTLLGGATTTSGRAR----------EED---IA 214
Query: 220 EVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYG---LDVVCVEYEIN 276
V+ E K ++ ++VG C G VE V +G ++ +V + I+
Sbjct: 215 AVINELAEMKKRSLVVVGECV-----GNVECVVEAAIGRVEKKEVPECLKEVKFINLSIS 269
Query: 277 EFVG-GRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVS---------------- 319
F R+ V+ +++ K + + C G GV++ G++K +
Sbjct: 270 SFRDRSRIEVDEKVMELKSLIRS-NYCIGKGVILYVGDIKWSIDYRENYYYHSSNQRRGY 328
Query: 320 ----DSVSTEAARFVVSQLTSLLKS--GNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWD 373
+ + E + V + G G +W++G A +++TY++ P L+
Sbjct: 329 YCPVEHMIMELGKLVYGNYDQQIHQPKGGGVNVWIMGIA-TFQTYMRCKTGNPSLET--- 384
Query: 374 LQLLPIHWKSSLMGSF 389
LL IH + GSF
Sbjct: 385 --LLAIHPLTIPTGSF 398
>gi|356494937|ref|XP_003516337.1| PREDICTED: TMV resistance protein N-like [Glycine max]
Length = 1258
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 94/157 (59%), Gaps = 15/157 (9%)
Query: 7 LARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQSYSVSP 66
+ + L+ E+A VL +++ +AR+++H TT LHVV+ LL PS L +AC ++S S
Sbjct: 24 ITQLALTPETASVLKESIAMAREKKHLHTTPLHVVAKLLDSPSGFLHQAC--MKSQPTSY 81
Query: 67 KLQFRALELCLGVAFDRLPSSKSVEFPPISNSLMAAIKRSQAQQRRNPDNYHLQQIHCNQ 126
LQ++ LELCL VA +RLP S S P ISNSL AA KR +AQQ +
Sbjct: 82 PLQYQGLELCLNVAMNRLPMSISSMEPLISNSLKAAFKRIRAQQH-------------GR 128
Query: 127 QTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDI 163
Q S KV+L+ +L+ILDDP S+V AG+ S DI
Sbjct: 129 QPPSTDKVELEQLILSILDDPSVSKVMKAAGYSSPDI 165
>gi|326498641|dbj|BAK02306.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 853
Score = 114 bits (284), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 100/185 (54%), Gaps = 28/185 (15%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLC--VPSSLLREACDR 58
MR +Q L+ E+A V+ AV +AR+R H+Q T LHV +A+L P+ LLR AC R
Sbjct: 1 MRAGGCAVQQALAPEAASVVRQAVTLARRRGHAQVTPLHVATAMLLPPAPAGLLRAACLR 60
Query: 59 VQSYSVSPKLQFRALELCLGVAFDRLPS-------------------SKSVEFPPISNSL 99
S+ LQ +ALELC VA +RLP+ + E P +SN+L
Sbjct: 61 SHSH----PLQCKALELCFNVALNRLPTCGPAAMFHGGAHMQHHHHHRGAAEAPALSNAL 116
Query: 100 MAAIKRSQAQQRRNPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFL 159
+AA KR+QA QRR +QQ A KV+L+ +++ILDDP SRV EAGF
Sbjct: 117 VAAFKRAQAHQRRGGAGDGVQQTAAPVLAA---KVELEQLIVSILDDPSVSRVMREAGFS 173
Query: 160 SRDIK 164
S +K
Sbjct: 174 SSQVK 178
>gi|414882124|tpg|DAA59255.1| TPA: hypothetical protein ZEAMMB73_924088 [Zea mays]
Length = 786
Score = 109 bits (273), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 98/183 (53%), Gaps = 29/183 (15%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR+ +Q L+ ++A V+ AV +AR+R H+Q T LHV SA+L LLR AC ++
Sbjct: 1 MRSGGCAVQQKLAGDAAAVMRQAVSLARRRGHAQVTPLHVASAVLLDAGGLLRAAC--LR 58
Query: 61 SYSVSPKLQFRALELCLGVAFDRL-------PSSKSVEF--------PPISNSLMAAIKR 105
S + S LQ +ALELC VA +RL P EF P +SN+L AA KR
Sbjct: 59 SRATSHPLQCKALELCFNVALNRLATAGGPAPPPAMFEFHIHSGHREPALSNALAAAFKR 118
Query: 106 SQAQQRRN----PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSR 161
+Q QRR D H Q + KV+L V++ILDDP SRV EAGF S
Sbjct: 119 AQGNQRRGGGSAADGQHQQNV--------AAKVELDQLVISILDDPSVSRVMREAGFSSA 170
Query: 162 DIK 164
++K
Sbjct: 171 EVK 173
>gi|50251982|dbj|BAD27916.1| heat shock protein-related-like [Oryza sativa Japonica Group]
gi|50252658|dbj|BAD28827.1| heat shock protein-related-like [Oryza sativa Japonica Group]
Length = 917
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 102/187 (54%), Gaps = 29/187 (15%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALL-----CVPSSLLREA 55
MR +Q L+ E+A V+ AV +AR+R ++Q T LHV SA+L LLR A
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLQAAGAAPAPGLLRAA 60
Query: 56 CDRVQSYSVSPKLQFRALELCLGVAFDRLPSSKS------------VEFPP-ISNSLMAA 102
C R S+ LQ +ALELC VA +RLP+S V +PP +SN+L+AA
Sbjct: 61 CLRSHSH----PLQCKALELCFNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNALVAA 116
Query: 103 IKRSQAQQRRNPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRD 162
KR+QA QRR + QQ +K++L+ V++ILDDP SRV EAGF S
Sbjct: 117 FKRAQAHQRRG-------SVETQQQPVLAVKIELEQLVISILDDPSVSRVMREAGFSSTQ 169
Query: 163 IKLAIIQ 169
+K + Q
Sbjct: 170 VKANVEQ 176
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 89/234 (38%), Gaps = 37/234 (15%)
Query: 535 QCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPINS-STKPQSNNDEHLLPP 593
C + P AHM + SA + P A N++ + P +S S+ Q P
Sbjct: 510 HCRDQEPAAHM--KKWMSAHGGS--PSRRTALNISSTAVSPCSSVSSYEQYTRLHQPYQP 565
Query: 594 HPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKLIDNKEQCFSGSISAEFD 653
+AD E T ++A D G G++ P+ A + + +GS+ E+
Sbjct: 566 WLVADDDDEAEETKHPYIAG---DGGAGRLVPA----AAKVVIKSDDSSASNGSVEVEW- 617
Query: 654 AVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRI 713
F V + K L AL ++V WQ + I+ V R R
Sbjct: 618 --RRPRFKEV---------------SAENLKVLCGALEKEVPWQKVIVPEIASTVLRCRS 660
Query: 714 GNGRDVGSN-------SKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHV 760
G + SK W+ FLG D GK ++A LA +VFG+ + +
Sbjct: 661 GMAAPAMARRSSSCSSSKEHTWMLFLGGDADGKLRVARELASLVFGSSKSFVSI 714
>gi|326501854|dbj|BAK06419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1010
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 196/447 (43%), Gaps = 74/447 (16%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALL---------CVPSS- 50
MR Q L+ E+A VL AVG+AR+R H Q T LHV ALL C +
Sbjct: 1 MRAGAYTIHQSLTAEAAAVLKLAVGLARRRGHGQVTPLHVAFALLSSACSQPLACAATGP 60
Query: 51 ---LLREACDRVQSYSVSPK---LQFRALELCLGVAFDRLPSSKSVEF------------ 92
LLR AC R S +V P LQ RALELC VA +RLP+S
Sbjct: 61 AYGLLRRACLRSHS-AVPPAQHPLQCRALELCFNVALNRLPTSGPHSPPPSSAPPFASSL 119
Query: 93 ----PPISNSLMAAIKRSQAQQRRN------------PDNYHLQQIHCNQQTASLLKVDL 136
P +SN+L+AA+KR+QA QRR P + Q QQ +KV+L
Sbjct: 120 IQPNPMLSNALVAALKRAQANQRRGCVELQQPPPSPGPVQHQGAQQQQLQQPVLAVKVEL 179
Query: 137 KYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRLSLTRCPPIFLYNLTDS- 195
+++ILDDP SRV EAGF S +K + + S S P I + D
Sbjct: 180 DQLIISILDDPSVSRVMREAGFSSATVKSNLEEESALMMSSSSSSPPPPVIPPHFFLDHS 239
Query: 196 ---------FPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEKKGKNPLLVGVCANSALKG 246
+P + P E+ R + EV+ R + NP++VG + A
Sbjct: 240 SIDGCGFGMWPAQFLTSPPVAVPCCKEDVRAVLEVMV-RKRGRRTNPVVVGDSVSMAEAV 298
Query: 247 FVESVNGGKVGLFPRQIYGLDVVCVEYE-INEFVGGRVNVEMMMLKFKEVESAVGRCSGP 305
E + + G P ++ G ++ ++ ++ + R +V+ + + AV R
Sbjct: 299 AGELLRCLERGEVPEELAGAHLLKLQLSYVHVRLMSRADVDAKAAQLRRSVDAVQR---G 355
Query: 306 GVVVNYGELKVLVSDSVSTEAA----------RFVVSQLTSLLKSGNGE-KLWLIGAAMS 354
G+VV G+L+ + + + A +V++L LL ++WL+ A S
Sbjct: 356 GLVVYVGDLRWALDEDPAGAGADHTASSYSPVEHMVAELGRLLDDLRARCRVWLVATA-S 414
Query: 355 YETYLKMLAKF--PGLDNDWDLQLLPI 379
Y+TY++ + P L++ W LQ + +
Sbjct: 415 YQTYMRCQHRRGQPSLESAWALQAVAV 441
>gi|357479513|ref|XP_003610042.1| Heat shock protein-related-like protein [Medicago truncatula]
gi|355511097|gb|AES92239.1| Heat shock protein-related-like protein [Medicago truncatula]
Length = 820
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 14/190 (7%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREAC---D 57
MR+ +Q L+ E+A VL ++ +AR+R H Q T LHV LL + S + AC
Sbjct: 1 MRSGGCALQQTLTAEAASVLKHSLVLARRRGHPQVTPLHVAITLLTLRLSSFKRACLKSH 60
Query: 58 RVQSYSVSPKLQFRALELCLGVAFDRLPSSKSVEF---PPISNSLMAAIKRSQAQQRRNP 114
+ + LQ RALELC VA +RLP++ S P +SN+L+AA+KR+QA QRR
Sbjct: 61 QPHHQTSQHPLQSRALELCFNVALNRLPTTPSPLIHSQPSLSNALIAALKRAQAHQRRGS 120
Query: 115 DNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQ 174
++Q +QQT +KV+L+ +++ILDDP SRV EAGF S +K +
Sbjct: 121 ----IEQQQQHQQTVLTVKVELEQLIISILDDPSVSRVMREAGFSSTLVKNNL----EDS 172
Query: 175 FPPRLSLTRC 184
F P S+ +C
Sbjct: 173 FSPSNSVFKC 182
Score = 48.1 bits (113), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 48/282 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L E V WQ E I +IS+A + + + N WL G D + K+++A +AE
Sbjct: 451 LQENVPWQSETIPSISKA-----LFDTKSTKLNEISFRWLFLQGNDFISKRRLALGIAES 505
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
VFG+ ++ +D+ ++ + P S + + R VV
Sbjct: 506 VFGSADLVLQLDMLKKETLIAPFS--------------------EMLLGALRKHQQLVVL 545
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPV 869
+E++D +AD L+ GKF ++ ++ +IF+ T G S+ +
Sbjct: 546 IENVD-SADTQFMKFLSDGYEKGKFETLSNKEGNLGQVIFILTKG---GSKSIEEK---- 597
Query: 870 KFSEEIILGAKRWQMQTAISHGFADAARGSGMNV--KV-TPRKENSNPESRRKRKRTDDG 926
+++ ++ WQ+ + F R + ++ K+ PR E E+ + ++ G
Sbjct: 598 --NQKTVINL-LWQI-SETKPNFLSPKRKAEFDLFSKIKNPRIE----ENEKGLLISEQG 649
Query: 927 DSPINSQKQVDDSFRS-YLDLNLPADEAEEDTSSEKFDSDTI 967
+Q SF S LDLN+ ADE EED ++ +S +I
Sbjct: 650 SKKEEFLRQ--SSFNSNTLDLNMKADE-EEDGENKAIESSSI 688
>gi|414587306|tpg|DAA37877.1| TPA: hypothetical protein ZEAMMB73_032476 [Zea mays]
Length = 928
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 183/438 (41%), Gaps = 103/438 (23%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVP--SSLLREACDR 58
MR +Q L+ E+A V+ AV +AR+R ++Q T LHV SA+L LLR AC R
Sbjct: 64 MRAGGCTVQQSLTAEAAAVVKQAVSLARRRGNAQVTPLHVASAMLAAAPAGQLLRAACLR 123
Query: 59 VQSYSVSPKLQFRALELCLGVAFDRLPSSKSVEF----------PPISNSLMAAIKRSQA 108
S+ LQ +ALELC VA +RLP+S S P +SN+L+AA KR+QA
Sbjct: 124 SHSH----PLQCKALELCFNVALNRLPASASSPLLGGNHHCYHPPSLSNALVAAFKRAQA 179
Query: 109 QQRRNPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAII 168
QRR Q Q + +K++L V++ILDDP SRV +AGF S +K +
Sbjct: 180 HQRRGGSVESQHQ----QPVVAAVKIELDQLVVSILDDPSVSRVMRDAGFSSTQVKANVE 235
Query: 169 Q--------------------PS---VTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLP 205
Q PS T PP PP+ L++
Sbjct: 236 QAVCSSSTMATAAAAPSKNPNPSSSATTTSPPPKEAKAKPPLALHHQAR----------- 284
Query: 206 FGPDDVDENCRRIGEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQIYG 265
DE+ + + LA R +++ A + V+ + G+
Sbjct: 285 ------DEDVAAVLDCLASRSKRRVVVIAESAAAAEAMAHAAVDKIKRGE---------- 328
Query: 266 LDVVCVEYEINEFVGGRVNVEMMMLKFKEV--ESAVGRCSGPGVVVNYGELK--VLVSDS 321
V++E + G +V V + + F+E+ E A R +V G + VLV +
Sbjct: 329 -----VKHEHDALRGAQV-VSLRVSSFREMPREEAERRLGELRCLVKQGRRQRVVLVVED 382
Query: 322 VSTEA--------------------ARFVVSQLTSLLKSGNGEKLWLIGAAMSYETYLKM 361
+ A VV++L +L + G WL+G +Y+ Y K
Sbjct: 383 LKWAAEFWAGHDGQSGRRGGYYYCAVEHVVNELRAL--ASGGSLCWLLGFG-TYQAYTKC 439
Query: 362 LAKFPGLDNDWDLQLLPI 379
P L++ W LQ L +
Sbjct: 440 RVGQPSLESLWGLQTLTV 457
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Query: 682 DYKTLRIALAEKVGWQDEAICTISQAVSRWRIG----NGRDVGSNSKRGIWLAFLGPDKV 737
+ K L AL ++V WQ E I ++ AV + R G + +++K W+ FLG D
Sbjct: 662 NLKLLCGALEKEVPWQKEIIPEVASAVLQCRSGIAKRRDKSRSADAKEETWMLFLGGDAD 721
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLR--------- 788
GK+++A LA +VFG++ + + + + + + + R
Sbjct: 722 GKERVARELASLVFGSRDSFLAIRPGASSSSPPRSGSSEGHRSNK---RPRMSPPPPGEE 778
Query: 789 -GKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
++ ++ P+ V+F+E +++A Q + +AI +G + G +V +
Sbjct: 779 SAPACLERLHDAVSENPHRVIFMEGVEQAGRD-CQLGIKEAIESGVVRNRAGVEVGVGDA 837
Query: 848 IFV 850
I V
Sbjct: 838 IVV 840
>gi|47496876|dbj|BAD19840.1| heat shock protein-related-like [Oryza sativa Japonica Group]
Length = 778
Score = 104 bits (259), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 141/559 (25%), Positives = 224/559 (40%), Gaps = 100/559 (17%)
Query: 28 RQRRHSQTTSLHVVSALL--------------------------CVPSSLLREACDRVQS 61
R+R H+Q T LHV LL C LLR AC R
Sbjct: 28 RRRGHAQLTPLHVAFTLLRSSSSSSSSSSPSDPPPFACSGGEPSCCAHGLLRRACVRAHP 87
Query: 62 YSV---------SPKLQFRALELCLGVAFDRLPSSKSVE------------FPP---ISN 97
S L+ RALELC VA +RLP++ ++ PP +SN
Sbjct: 88 AVAACAPAAAAASHPLRCRALELCFNVALNRLPATNAMADCGRACSPASSLVPPDPTLSN 147
Query: 98 SLMAAIKRSQAQQRRN--------PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMA 149
+L+AA+KR+QA QRR P + LQ QQ +KV+L +++ILDDP
Sbjct: 148 ALVAALKRAQANQRRGCIELQSLQPPQHALQP---QQQPLLAIKVELDQLIISILDDPSV 204
Query: 150 SRVFGEAGFLSRDIKLAI-----IQPSVTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKL 204
SRV EAGF S +K + + PS+ S + P + + G A
Sbjct: 205 SRVMREAGFSSAAVKSTLEEGGAMLPSLGGHHVCYSSSSPEPHIDLDAHAASGGGAPWPA 264
Query: 205 PF------GPDDVDENCRRIGEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGL 258
F G +E+ R I EV+ R + NP++VG + A E + + G
Sbjct: 265 QFLHRPDTGSSCKEEDVRAILEVMV-RKQWARPNPVVVGDSVSVAEASVAELMRRLETGD 323
Query: 259 FPRQIYGLDVVCVEY-EINEFVGGRVNVEMMMLKFKE-VESAVGRCSGPGVVVNYGELKV 316
P ++ G V+ + ++ + R +V+ + + + S V G+V+ G+++
Sbjct: 324 VPGELRGAHVLRLHLSRVHLRLMTRADVDAQVAELRRTANSIVVDAKAAGLVIYVGDVRW 383
Query: 317 LVSDSVSTEAARFV------------VSQLTSLLKSGNGEKLWLIGAAMSYETYLKMLAK 364
V D +++L S L++ + + WL+ AA SY+TY++ +
Sbjct: 384 AVDDDDHHHHHALAEYSAPEDHMVAELARLMSELRAASRGRAWLVAAA-SYQTYVRCQQR 442
Query: 365 F-----PGLDNDWDLQLLPIHWKSSLMGSFVPFGGFFSSPPDFKNPVRSKSHYSTLCYLC 419
P L+ W LQ + + + G + P + V + L +
Sbjct: 443 RRRRRAPSLEATWSLQAVVVPAGAGADAGTGLSLGRRAPPAPPPSRVAEDDQIAKLGEIP 502
Query: 420 TEKL-----EQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVGTAKAKDDVTAL 474
T L + V AL E +D + +D L + G A + T+
Sbjct: 503 TLDLALGGDDGGVPALCA-ECADGYEKEASQVRAKADGT-TLALTYFPGWPHANEPQTSH 560
Query: 475 NAKIMELQRKWNDTCQSLH 493
A++MEL+RKW CQ +H
Sbjct: 561 KAELMELRRKWGILCQRVH 579
>gi|222628569|gb|EEE60701.1| hypothetical protein OsJ_14192 [Oryza sativa Japonica Group]
Length = 1050
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 195/471 (41%), Gaps = 108/471 (22%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSS---------- 50
MR Q L+ E+A VL A+G+AR+R H+Q T LHV ALL S
Sbjct: 1 MRAGAYTIHQSLTAEAAAVLKLALGIARRRGHAQVTPLHVAFALLSPACSPPQQQPAPPP 60
Query: 51 --LLREACDRVQ----SYSVSPKLQFRALELCLGVAFDRL-------------------- 84
LL+ AC R + + LQ RALELC VA +RL
Sbjct: 61 YGLLKRACLRSHPSAAAAVAAHPLQCRALELCFNVALNRLPTSAPHSPPPSSSAPSGAVA 120
Query: 85 -PSSKSV--EFPPISNSLMAAIKRSQAQQRRN-------------PDNYHLQQIHCNQQT 128
P + S+ P +SN+L+AA+KR+QA QRR P + QQ
Sbjct: 121 PPFASSLIQPNPTLSNALVAALKRAQANQRRGCVELQQQPPPPPPPPPPPVAATAQQQQP 180
Query: 129 ASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRLSLTRCPPIF 188
+KV+L +++ILDDP SRV EAGF S +K + S S
Sbjct: 181 LLAIKVELDQLIISILDDPSVSRVMREAGFSSSTVKSNLEGESALMMSTSSSPPPPAIPP 240
Query: 189 LYNLTDS--------------------FPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEK 228
+ L S F G+ +P +DV R + EV+ R +
Sbjct: 241 HFFLDPSIGVGGNGGGGGGGFMLWPAPFLSSPGMAVPSCKEDV----RAVLEVMV-RKQG 295
Query: 229 KGKNPLLVG--VCANSALKG-FVESVNGGKVGLFPRQIYGLDVVCVEYE-INEFVGGRVN 284
+ NP++VG V A+ G + + GG V P ++ G ++ ++ ++ + R +
Sbjct: 296 RRTNPVVVGDSVSMAEAVAGELLRRLEGGDV---PDELAGAHLLKLQLSYVHVRLMSRAD 352
Query: 285 VEMMMLKFKEVESAVGRCSGPGVVVNYGELK---------------VLVSDSVSTEAARF 329
V+ + + AV R G+VV G+L+ + + S
Sbjct: 353 VDAKAAELRRSVDAVKRG---GLVVYVGDLRWALDEDHHHHHHPGADHHNTASSYSPVEH 409
Query: 330 VVSQLTSLLKSGNGE-----KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQ 375
+V++L LL ++WL+ A SY+TY++ + P L++ W LQ
Sbjct: 410 MVAELGRLLGDLRASAPPRGRVWLVATA-SYQTYMRCRRRRPSLESAWALQ 459
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 22/169 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRW-RIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAE 748
L + V WQ A+ I+ AV+ R GNG G+WL G D +++A+ +AE
Sbjct: 688 LRKNVPWQRAAVAEIADAVAAGARSGNG-----TKGAGVWLLLKGSDHAAVRRVAAVIAE 742
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
G+ +++ V + PN F C + DF R V+ V+
Sbjct: 743 THCGSADRVVVVS-------ADPNK-FGCAD-DF-----RSDVVARASMAAAAGGNKLVL 788
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSY-GRDVSISGMIFVATSTIL 856
++D+++A +V+ L A +G D + G+++ +SG + V T++ L
Sbjct: 789 VVDDVERAPQHVVE-CLVAASRSGALKDKFGGQELDLSGSVVVMTTSKL 836
>gi|21741941|emb|CAD40432.1| OSJNBa0035B13.5 [Oryza sativa Japonica Group]
gi|215769315|dbj|BAH01544.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1064
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 196/471 (41%), Gaps = 108/471 (22%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSS---------- 50
MR Q L+ E+A VL A+G+AR+R H+Q T LHV ALL S
Sbjct: 1 MRAGAYTIHQSLTAEAAAVLKLALGIARRRGHAQVTPLHVAFALLSPACSPPQQQPAPPP 60
Query: 51 --LLREACDRVQ----SYSVSPKLQFRALELCLGVAFDRL-------------------- 84
LL+ AC R + + LQ RALELC VA +RL
Sbjct: 61 YGLLKRACLRSHPSAAAAVAAHPLQCRALELCFNVALNRLPTSAPHSPPPSSSAPSGAVA 120
Query: 85 -PSSKSV--EFPPISNSLMAAIKRSQAQQRRN-------------PDNYHLQQIHCNQQT 128
P + S+ P +SN+L+AA+KR+QA QRR P + QQ
Sbjct: 121 PPFASSLIQPNPTLSNALVAALKRAQANQRRGCVELQQQPPPPPPPPPPPVAATAQQQQP 180
Query: 129 ASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRLSLTRCPPIF 188
+KV+L +++ILDDP SRV EAGF S +K + S S
Sbjct: 181 LLAIKVELDQLIISILDDPSVSRVMREAGFSSSTVKSNLEGESALMMSTSSSPPPPAIPP 240
Query: 189 LYNLTDS--------------------FPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEK 228
+ L S F G+ +P +DV R + EV+ R +
Sbjct: 241 HFFLDPSIGVGGNGGGGGGGFMLWPAPFLSSPGMAVPSCKEDV----RAVLEVMV-RKQG 295
Query: 229 KGKNPLLVG--VCANSALKG-FVESVNGGKVGLFPRQIYGLDVVCVEYE-INEFVGGRVN 284
+ NP++VG V A+ G + + GG V P ++ G ++ ++ ++ + R +
Sbjct: 296 RRTNPVVVGDSVSMAEAVAGELLRRLEGGDV---PDELAGAHLLKLQLSYVHVRLMSRAD 352
Query: 285 VEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLV---------------SDSVSTEAARF 329
V+ + + AV R G+VV G+L+ + + + S
Sbjct: 353 VDAKAAELRRSVDAVKRG---GLVVYVGDLRWALDEDHHHHHHPGADHHNTASSYSPVEH 409
Query: 330 VVSQLTSLLKSGNGE-----KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQ 375
+V++L LL ++WL+ A SY+TY++ + P L++ W LQ
Sbjct: 410 MVAELGRLLGDLRASAPPRGRVWLVATA-SYQTYMRCRRRRPSLESAWALQ 459
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 22/169 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRW-RIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAE 748
L + V WQ A+ I+ AV+ R GNG G+WL G D +++A+ +AE
Sbjct: 702 LRKNVPWQRAAVAEIADAVAAGARSGNG-----TKGAGVWLLLKGSDHAAVRRVAAVIAE 756
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
G+ +++ V + PN F C + DF R V+ V+
Sbjct: 757 THCGSADRVVVVS-------ADPNK-FGCAD-DF-----RSDVVARASMAAAAGGNKLVL 802
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSY-GRDVSISGMIFVATSTIL 856
++D+++A +V+ L A +G D + G+++ +SG + V T++ L
Sbjct: 803 VVDDVERAPQHVVE-CLVAASRSGALKDKFGGQELDLSGSVVVMTTSKL 850
>gi|297602401|ref|NP_001052404.2| Os04g0298700 [Oryza sativa Japonica Group]
gi|255675299|dbj|BAF14318.2| Os04g0298700 [Oryza sativa Japonica Group]
Length = 517
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 195/471 (41%), Gaps = 108/471 (22%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSS---------- 50
MR Q L+ E+A VL A+G+AR+R H+Q T LHV ALL S
Sbjct: 1 MRAGAYTIHQSLTAEAAAVLKLALGIARRRGHAQVTPLHVAFALLSPACSPPQQQPAPPP 60
Query: 51 --LLREACDR----VQSYSVSPKLQFRALELCLGVAFDRL-------------------- 84
LL+ AC R + + LQ RALELC VA +RL
Sbjct: 61 YGLLKRACLRSHPSAAAAVAAHPLQCRALELCFNVALNRLPTSAPHSPPPSSSAPSGAVA 120
Query: 85 -PSSKSV--EFPPISNSLMAAIKRSQAQQRRN-------------PDNYHLQQIHCNQQT 128
P + S+ P +SN+L+AA+KR+QA QRR P + QQ
Sbjct: 121 PPFASSLIQPNPTLSNALVAALKRAQANQRRGCVELQQQPPPPPPPPPPPVAATAQQQQP 180
Query: 129 ASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQFPPRLSLTRCPPIF 188
+KV+L +++ILDDP SRV EAGF S +K + S S
Sbjct: 181 LLAIKVELDQLIISILDDPSVSRVMREAGFSSSTVKSNLEGESALMMSTSSSPPPPAIPP 240
Query: 189 LYNLTDS--------------------FPGRAGLKLPFGPDDVDENCRRIGEVLAGRDEK 228
+ L S F G+ +P +DV R + EV+ R +
Sbjct: 241 HFFLDPSIGVGGNGGGGGGGFMLWPAPFLSSPGMAVPSCKEDV----RAVLEVMV-RKQG 295
Query: 229 KGKNPLLVG--VCANSALKG-FVESVNGGKVGLFPRQIYGLDVVCVEYE-INEFVGGRVN 284
+ NP++VG V A+ G + + GG V P ++ G ++ ++ ++ + R +
Sbjct: 296 RRTNPVVVGDSVSMAEAVAGELLRRLEGGDV---PDELAGAHLLKLQLSYVHVRLMSRAD 352
Query: 285 VEMMMLKFKEVESAVGRCSGPGVVVNYGELK---------------VLVSDSVSTEAARF 329
V+ + + AV R G+VV G+L+ + + S
Sbjct: 353 VDAKAAELRRSVDAVKRG---GLVVYVGDLRWALDEDHHHHHHPGADHHNTASSYSPVEH 409
Query: 330 VVSQLTSLLKSGNGE-----KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQ 375
+V++L LL ++WL+ A SY+TY++ + P L++ W LQ
Sbjct: 410 MVAELGRLLGDLRASAPPRGRVWLVATA-SYQTYMRCRRRRPSLESAWALQ 459
>gi|218190701|gb|EEC73128.1| hypothetical protein OsI_07140 [Oryza sativa Indica Group]
Length = 777
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 180/436 (41%), Gaps = 93/436 (21%)
Query: 28 RQRRHSQTTSLHVVSALL--------------------------CVPSSLLREACDRVQS 61
R+R H+Q T LHV LL C LLR AC R
Sbjct: 28 RRRGHAQLTPLHVAFTLLRSSSSSSSSSSPSDPPPFACSGGEPSCCAHGLLRRACVRAHP 87
Query: 62 YSV---------SPKLQFRALELCLGVAFDRLPSSKSVE------------FPP---ISN 97
S L+ RALELC VA +RLP++ ++ PP +SN
Sbjct: 88 AVAACAPAAAAASHPLRCRALELCFNVALNRLPATNAMADCGRACSPASSLVPPDPTLSN 147
Query: 98 SLMAAIKRSQAQQRRN--------PDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMA 149
+L+AA+KR+QA QRR P + LQ QQ +KV+L +++ILDDP
Sbjct: 148 ALVAALKRAQANQRRGCIELQSLQPPQHALQP---QQQPLLAIKVELDQLIISILDDPSV 204
Query: 150 SRVFGEAGFLSRDIKLAI-----IQPSVTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKL 204
SRV EAGF S +K + + PS+ S + P + + G A
Sbjct: 205 SRVMREAGFSSAAVKSTLEEGGAMLPSLGGHHVCYSSSSPEPHIDLDAHAASGGGAPWPA 264
Query: 205 PF------GPDDVDENCRRIGEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGL 258
F G +E+ R I EV+ R + NP++VG + A E + + G
Sbjct: 265 QFLHRPDTGSSCKEEDVRAILEVMV-RKQWARPNPVVVGDSVSVAEASVAELMRRLETGD 323
Query: 259 FPRQIYGLDVVCVEY-EINEFVGGRVNVEMMMLKFKEV-ESAVGRCSGPGVVVNYGELKV 316
P ++ G V+ + ++ + R +V+ + + + S V G+V+ G+++
Sbjct: 324 VPGELRGAHVLRLHLSRVHLRLMTRADVDAQVAELRRTANSIVVDAKAAGLVIYVGDVRW 383
Query: 317 LVSDSVSTEAARFV------------VSQLTSLLKSGNGEKLWLIGAAMSYETYLKMLAK 364
V D +++L S L++ + + WL+ AA SY+TY++ +
Sbjct: 384 AVDDDDHHHHHALAEYSAPEDHMVAELARLMSELRAASRGRAWLVAAA-SYQTYVRCQQR 442
Query: 365 F-----PGLDNDWDLQ 375
P L+ W LQ
Sbjct: 443 RRRRRAPSLEATWSLQ 458
>gi|218185280|gb|EEC67707.1| hypothetical protein OsI_35183 [Oryza sativa Indica Group]
Length = 845
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 102/186 (54%), Gaps = 26/186 (13%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR +Q L+ E+A V+ AV +AR+R H+Q T LHV SA+L + LLR AC +Q
Sbjct: 1 MRAGGCAVQQALAAEAAGVVRQAVTLARRRGHAQVTPLHVASAMLSA-AGLLRAAC--LQ 57
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSS------------------KSVEFPPISNSLMAA 102
S+ S LQ +ALELC VA +RLP++ P +SN+L+AA
Sbjct: 58 SH--SHPLQCKALELCFNVALNRLPTAGPAAAAAIFHHHPHHPGGGGGHHPALSNALVAA 115
Query: 103 IKRSQAQQRRNP-DNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSR 161
KR+QA QRR + Q + AS KV+L+ +++ILDDP SRV EAGF S
Sbjct: 116 FKRAQAHQRRGSVEGQPPPQPPPSPVVAS--KVELEQLIISILDDPSVSRVMREAGFSSS 173
Query: 162 DIKLAI 167
+K +
Sbjct: 174 QVKANV 179
>gi|62701870|gb|AAX92943.1| transposon protein, putative, mutator sub-class [Oryza sativa
Japonica Group]
gi|77548749|gb|ABA91546.1| transposon protein, putative, Mutator sub-class, expressed [Oryza
sativa Japonica Group]
gi|222615545|gb|EEE51677.1| hypothetical protein OsJ_33029 [Oryza sativa Japonica Group]
Length = 845
Score = 99.8 bits (247), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 101/183 (55%), Gaps = 26/183 (14%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR +Q L+ E+A V+ AV +AR+R H+Q T LHV SA+L + LLR AC +Q
Sbjct: 1 MRAGGCAVQQALAAEAAGVVRQAVTLARRRGHAQVTPLHVASAMLSA-AGLLRAAC--LQ 57
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSS------------------KSVEFPPISNSLMAA 102
S+ S LQ +ALELC VA +RLP++ P +SN+L+AA
Sbjct: 58 SH--SHPLQCKALELCFNVALNRLPTAGPAAAAAIFHHHPHHPGGGGGHHPALSNALVAA 115
Query: 103 IKRSQAQQRRNP-DNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSR 161
KR+QA QRR + Q + AS KV+L+ +++ILDDP SRV EAGF S
Sbjct: 116 FKRAQAHQRRGSVEGQPPPQPPPSPVVAS--KVELEQLIISILDDPSVSRVMREAGFSSS 173
Query: 162 DIK 164
+K
Sbjct: 174 QVK 176
>gi|413924950|gb|AFW64882.1| hypothetical protein ZEAMMB73_688581 [Zea mays]
Length = 835
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 84/151 (55%), Gaps = 19/151 (12%)
Query: 28 RQRRHSQTTSLHVVSALLCVPSSLLREACDRVQSYSVSPKLQFRALELCLGVAFDRLPSS 87
R+R H+Q T LHV SA+L + LLR AC R S+ LQ +ALELC VA +RLP++
Sbjct: 28 RRRGHAQVTPLHVASAMLSA-AGLLRAACLRSHSH----PLQCKALELCFNVALNRLPTA 82
Query: 88 KSVEFPP-----------ISNSLMAAIKRSQAQQRRNPDNYHLQQIHCNQQTASLLKVDL 136
+ F P +SN+L+AA KR+QA QRR + Q Q KVD+
Sbjct: 83 AASMFHPHHHAGQQHAPVLSNALVAAFKRAQAHQRRGSVDGAQGQ---PPQPVLAGKVDI 139
Query: 137 KYFVLAILDDPMASRVFGEAGFLSRDIKLAI 167
+++ILDDP SRV EAGF S +K +
Sbjct: 140 DQLIISILDDPSVSRVMREAGFSSSQVKANV 170
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 81/208 (38%), Gaps = 21/208 (10%)
Query: 664 VQSSSCSAPHTGEP----FDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRD- 718
V +SS AP P + K L AL + + + I+ V + R G R
Sbjct: 558 VSNSSEGAPAAESPKFTELTAENLKILSNALENRAPRHKDVVTEIASVVLQCRSGMTRKR 617
Query: 719 ----VGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSI 774
WL F G GKK ++ LA +VFG+ K + +S V +S
Sbjct: 618 RRWCCQEKPSAVTWLLFQGAGNDGKKAVSKELARLVFGSYSKFTAISLSEFTHVHSDSSS 677
Query: 775 FDC-----QNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAI 829
+ +++D G+ V +Y P+ V+ ++ +++ D + + AI
Sbjct: 678 GEITLKRQRSLD------TGRSYVQRLYDAILENPHRVIMIDGVEQ-LDYESEIGIRNAI 730
Query: 830 STGKFTDSYGRDVSISGMIFVATSTILK 857
+ G+ G ++S+ I V L+
Sbjct: 731 TNGRIRGCNGDEISLGDTIIVLNCEALR 758
>gi|413924951|gb|AFW64883.1| hypothetical protein ZEAMMB73_688581 [Zea mays]
Length = 838
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 84/151 (55%), Gaps = 19/151 (12%)
Query: 28 RQRRHSQTTSLHVVSALLCVPSSLLREACDRVQSYSVSPKLQFRALELCLGVAFDRLPSS 87
R+R H+Q T LHV SA+L + LLR AC R S+ LQ +ALELC VA +RLP++
Sbjct: 28 RRRGHAQVTPLHVASAMLSA-AGLLRAACLRSHSH----PLQCKALELCFNVALNRLPTA 82
Query: 88 KSVEFPP-----------ISNSLMAAIKRSQAQQRRNPDNYHLQQIHCNQQTASLLKVDL 136
+ F P +SN+L+AA KR+QA QRR + Q Q KVD+
Sbjct: 83 AASMFHPHHHAGQQHAPVLSNALVAAFKRAQAHQRRGSVDGAQGQ---PPQPVLAGKVDI 139
Query: 137 KYFVLAILDDPMASRVFGEAGFLSRDIKLAI 167
+++ILDDP SRV EAGF S +K +
Sbjct: 140 DQLIISILDDPSVSRVMREAGFSSSQVKANV 170
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 81/208 (38%), Gaps = 21/208 (10%)
Query: 664 VQSSSCSAPHTGEP----FDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRD- 718
V +SS AP P + K L AL + + + I+ V + R G R
Sbjct: 561 VSNSSEGAPAAESPKFTELTAENLKILSNALENRAPRHKDVVTEIASVVLQCRSGMTRKR 620
Query: 719 ----VGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSI 774
WL F G GKK ++ LA +VFG+ K + +S V +S
Sbjct: 621 RRWCCQEKPSAVTWLLFQGAGNDGKKAVSKELARLVFGSYSKFTAISLSEFTHVHSDSSS 680
Query: 775 FDC-----QNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAI 829
+ +++D G+ V +Y P+ V+ ++ +++ D + + AI
Sbjct: 681 GEITLKRQRSLD------TGRSYVQRLYDAILENPHRVIMIDGVEQ-LDYESEIGIRNAI 733
Query: 830 STGKFTDSYGRDVSISGMIFVATSTILK 857
+ G+ G ++S+ I V L+
Sbjct: 734 TNGRIRGCNGDEISLGDTIIVLNCEALR 761
>gi|413918032|gb|AFW57964.1| hypothetical protein ZEAMMB73_132211 [Zea mays]
Length = 1030
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 148/574 (25%), Positives = 233/574 (40%), Gaps = 127/574 (22%)
Query: 28 RQRRHSQTTSLHVVSALL-------------------CVPSSLLREACDRVQ------SY 62
R+R H+Q T LHV ALL VP LL+ AC R +
Sbjct: 28 RRRGHAQVTPLHVAFALLTGPAACAQPLAAFSSPASPAVPYGLLKRACLRSHPAPGPAAC 87
Query: 63 SVSPK--LQFRALELCLGVAFDRLPSS-------KSVEF--------PPISNSLMAAIKR 105
+P+ LQ RALELC VA +RLP+S + F P +SN+L+AA+KR
Sbjct: 88 HGAPQHPLQCRALELCFNVALNRLPASGPQSAPSSTSPFTSPLIQPSPTLSNALVAALKR 147
Query: 106 SQAQQRRNPDNYHLQQIHCNQQTASL-----LKVDLKYFVLAILDDPMASRVFGEAGFLS 160
+QA QRR N A +KV+L+ V++IL+DP SRV EAGF S
Sbjct: 148 AQANQRRGCVELQQPPPPANAPPAQQQALLAIKVELEQLVISILEDPSVSRVMREAGFSS 207
Query: 161 RDIKLAIIQPSVTQFPPRLSLTRCPPI-------FLYNLTDSFPGRAG----------LK 203
+K + + S P S P F + + G+AG L
Sbjct: 208 ATVKSNLEEESALMPPRSSSSPPLPLPPPPIPPHFFIDPSIPSSGKAGDRFGLWPAHFLS 267
Query: 204 LPFGPDDVDENCRRIGEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQI 263
GP +++ R + EV+ + E++ NP++VG + A E + + G P ++
Sbjct: 268 AAPGPGACNDDVRAVLEVMVRKQERR-SNPVVVGDSVSMAEAVADELLRRLERGDVPEEL 326
Query: 264 YGLDVVCVEYE-INEFVGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDSV 322
G ++ ++ ++ + R +V + + AV G G+VV G+L+ + +
Sbjct: 327 AGAHLLKLQLSYVHIRLMSRGDVNARASELRRSVDAVQLQRGGGLVVYVGDLRWALDEEA 386
Query: 323 -------STEAARFVVSQLTSLLKS--GNGEKLWLIGAAMSYETYLKMLA--KFPGLDND 371
S +V++L LL + + WL+ A SY+TY++ + P L++
Sbjct: 387 HDNHAVSSYSPVEHMVAELGRLLDDLRASCGRAWLVATA-SYQTYMRWQQRRRRP-LESA 444
Query: 372 WDLQLLPIHWKSSL------------------MGSFVPFGGFFSSPPDFKNP---VRSKS 410
W LQ + + S + VP +S P +NP V + +
Sbjct: 445 WTLQAVVVPTGSGTGLSLNSLGSSSSCSSLQSASAGVPP-PMLTSQPLGQNPFPEVGAAT 503
Query: 411 HYS-----------TLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTS 459
++ LC CT+ E+E A L+K E+ L DR A
Sbjct: 504 AFAGRDEQEDEMQLALCTECTKNYERE-ATLVKAEADAEGPRASLPGWLVLDRPPA---- 558
Query: 460 KGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLH 493
D T + L+RKW+ C+ LH
Sbjct: 559 ----------DQTPHEKYLTVLKRKWSRLCRKLH 582
>gi|414587732|tpg|DAA38303.1| TPA: hypothetical protein ZEAMMB73_613010 [Zea mays]
Length = 1040
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 153/574 (26%), Positives = 227/574 (39%), Gaps = 128/574 (22%)
Query: 28 RQRRHSQTTSLHVVSALLCVPSS----------------------LLREACDR------V 59
R+R H+Q T LHV ALL P++ LL+ AC R
Sbjct: 28 RRRGHAQVTPLHVAFALLTGPAAAAACMQPLAAFYSPASLAAPYGLLKRACLRSHPAPGA 87
Query: 60 QSYSVSPK--LQFRALELCLGVAFDRLP--------SSKSVEF--------PPISNSLMA 101
S +P+ LQ RALELC VA +RLP SS + F P +SN+L+A
Sbjct: 88 ASSHGAPQHPLQCRALELCFNVALNRLPASGPHSPPSSMTAPFTSPLIQPSPTLSNALVA 147
Query: 102 AIKRSQAQQRRNPDNYHLQQIHCNQQTASLL---KVDLKYFVLAILDDPMASRVFGEAGF 158
A+KR+QA QRR N L KV+L+ V++ILDDP SRV EAGF
Sbjct: 148 ALKRAQANQRRGCVELPQPPPPANAPQPQPLLAIKVELEQLVISILDDPSVSRVMREAGF 207
Query: 159 LSRDIK------LAIIQPSVTQFPPRLSLTRCPPIFL-------YNLTDSF---PGRAGL 202
S +K A++ P + PP P F+ D F P + L
Sbjct: 208 SSATVKNNLEEESALMPPPSSSSPPPPPPPIPPHFFIDSSISSGGKSGDRFGLWPAQF-L 266
Query: 203 KLPFGPDDVDENCRRIGEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQ 262
P GP + R + EV+ R E + NP++VG + A E + + G P
Sbjct: 267 AAP-GPGACSADVRAVLEVMV-RKEGRRSNPVVVGDSVSMAEAVAGELLRCLERGDVPEA 324
Query: 263 IYGLDVVCVEYE-INEFVGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDS 321
+ G ++ ++ ++ + R +V + + AV G G+VV G+L+ + +
Sbjct: 325 LAGAHLLKLQLSYVHVRLMSRADVNARASELRRSVDAVQLQRGGGLVVCVGDLRWALDEE 384
Query: 322 VSTEAA-------RFVVSQLTSLLKSGNGEKL--WLIGAAMSYETYLKMLA--KFPGLDN 370
+ A +V++L LL ++ WL+ A SY+TY++ + P L++
Sbjct: 385 ANDNHAVSSYSPVEHMVAELGRLLDDLRASRVRAWLVATA-SYQTYMRWQQRRRRP-LES 442
Query: 371 DWDLQ--LLPIHWKSSLMGSFV-----------------------------PFGGFFSSP 399
W LQ ++P S L + + PF S
Sbjct: 443 AWALQAVVVPTGSGSGLSLNILHSTSSSTSLPSASAGVPPATAASQQLGQNPF-AMAGSA 501
Query: 400 PDFKNPVRSKSHYSTLCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTS 459
+F LC CT E E A+L+K E L D +A T
Sbjct: 502 TEFAGRDEQDEMQLVLCTECTRNYESE-ASLVKAEDDVEGPRASLAGWLVLDGPSAAQTP 560
Query: 460 KGVGTAKAKDDVTALNAKIMELQRKWNDTCQSLH 493
K K ++EL+RKW+ C LH
Sbjct: 561 H-----KQK--------YLIELKRKWSRLCGKLH 581
>gi|147815203|emb|CAN74565.1| hypothetical protein VITISV_004969 [Vitis vinifera]
Length = 959
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 134/534 (25%), Positives = 207/534 (38%), Gaps = 121/534 (22%)
Query: 213 ENCRRIGEVLAGRDEKKGKNPLLVGVCANSA-LKGFVESVNGGKVGLFPRQIYGLDVVCV 271
E +R+ ++L K +NP+LVG A +K + + G P + ++V+ +
Sbjct: 61 EKVKRVVDILL---RTKKRNPVLVGESEPEAVMKELLRRIEKRDFGDGP--LKNVEVISL 115
Query: 272 EYEINEFVGGRVNVEMMMLKFKEVESAV-GRCSGPGVVVNYGELKVLVSDSVS------- 323
E++ R + K KE+ V R G ++++ G+LK LV V+
Sbjct: 116 HRELSLNNSDRTQIPT---KLKELGRLVEARIGGGSIILDLGDLKWLVEQPVNLGVAGSG 172
Query: 324 -------TEAARFVVSQLTSLLK---SGNGEKLWLIGAAMSYETYLKMLAKFPGLDNDWD 373
+EA R V+++ LL G+ +LWLIG A + ETYL+ P ++NDWD
Sbjct: 173 TVGQQVVSEAGRAAVAEMGKLLAMFGEGSNGRLWLIGTA-TCETYLRFQVYHPSMENDWD 231
Query: 374 LQLLPIHWKSSLMGSFVPFG--GFFSSPPDFKNPVRS-----------------KSHYST 414
LQ +PI ++ + G F FG G SS + P+++ + +
Sbjct: 232 LQAVPIAARTPVPGLFSRFGTNGILSSSVESLTPMKNFPTAITALPRRVSENMDPAQKMS 291
Query: 415 LCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSS-----DRIAALDTS-KGVGTAKAK 468
C C E EQE+ L E S ++ + SS ALD K ++ K
Sbjct: 292 CCPQCMENYEQELGKLEGQEFEKSSSEVKSEVSRSSLPQWLKNAKALDGDVKTTDQSQTK 351
Query: 469 DDVTALNAKIMELQRKWNDTCQSLHRTQLVPKLDIRQRSHVQLSEFVRLMANRKGSSSKY 528
D K +L +KWNDTC LH L+ + + LS A G +
Sbjct: 352 DQELIWKQKPQDLLKKWNDTCLHLHPNFHQHNLNSERITPTALSMSGLYNATLLGRQAFQ 411
Query: 529 PSLCESQCTNPSPGAHMLSQNISSAEQNATIPLSSEANNVNFQSRLPINSSTKPQSNNDE 588
P L ++ N L +NS+ ++
Sbjct: 412 PKLQPTR---------------------------------NLGETLQLNSNLVANQPCEQ 438
Query: 589 HLLPPHPLADLYKPHEHTSFSFLASVTTDLGLG--KIYPSTRQEANTPKLIDNKEQCFSG 646
+ PP + V TDL LG KI +T ++ + +ID F
Sbjct: 439 AVTPPG-----------------SPVRTDLVLGRTKINETTTEKIHKEHVID-----FFQ 476
Query: 647 SISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEA 700
IS+E S FH +Q+ S P D K L LAEKV WQ +A
Sbjct: 477 CISSE----SLNKFHE-LQNDKLS------PLDADSVKKLLKGLAEKVSWQQDA 519
>gi|414869079|tpg|DAA47636.1| TPA: hypothetical protein ZEAMMB73_303998 [Zea mays]
Length = 1033
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 184/425 (43%), Gaps = 82/425 (19%)
Query: 28 RQRRHSQTTSLHVVSALLCVPSS----------------------LLREACDR------V 59
R+R H+Q T LHV ALL P++ LL+ AC R
Sbjct: 28 RRRGHAQVTPLHVAFALLTGPAAAAACMQPLAAFYSPASLAAPYGLLKRACLRSHPAPGA 87
Query: 60 QSYSVSPK--LQFRALELCLGVAFDRLP--------SSKSVEF--------PPISNSLMA 101
S +P+ LQ RALELC VA +RLP SS + F P +SN+L+A
Sbjct: 88 ASSHGAPQHPLQCRALELCFNVALNRLPASGPHSPPSSMTAPFTSPLIQPSPTLSNALVA 147
Query: 102 AIKRSQAQQRRNPDNYHLQQIHCNQQTASLL---KVDLKYFVLAILDDPMASRVFGEAGF 158
A+KR+QA QRR N L KV+L+ V++ILDDP SRV EAGF
Sbjct: 148 ALKRAQANQRRGCVELPQPPPPANAPQPQPLLAIKVELEQLVISILDDPSVSRVMREAGF 207
Query: 159 LSRDIK------LAIIQPSVTQFPPRLSLTRCPPIFL-------YNLTDSF---PGRAGL 202
S +K A++ P + PP P F+ D F P + L
Sbjct: 208 SSATVKNNLEEESALMPPPSSSSPPPPPPPIPPHFFIDSSISSGGKSGDRFGLWPAQF-L 266
Query: 203 KLPFGPDDVDENCRRIGEVLAGRDEKKGKNPLLVGVCANSALKGFVESVNGGKVGLFPRQ 262
P GP + R + EV+ R E + NP++VG + A E + + G P
Sbjct: 267 AAP-GPGACSADVRAVLEVMV-RKEGRRSNPVVVGDSVSMAEAVAGELLRCLERGDVPEA 324
Query: 263 IYGLDVVCVEYE-INEFVGGRVNVEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDS 321
+ G ++ ++ ++ + R +V + + AV G G+VV G+L+ + +
Sbjct: 325 LAGAHLLKLQLSYVHVRLMSRADVNARASELRRSVDAVQLQRGGGLVVCVGDLRWALDEE 384
Query: 322 VSTEAA-------RFVVSQLTSLLKSGNGEKL--WLIGAAMSYETYLKMLA--KFPGLDN 370
+ A +V++L LL ++ WL+ A SY+TY++ + P L++
Sbjct: 385 ANDNHAVSSYSPVEHMVAELGRLLDDLRASRVRAWLVATA-SYQTYMRWQQRRRRP-LES 442
Query: 371 DWDLQ 375
W LQ
Sbjct: 443 AWALQ 447
>gi|413936868|gb|AFW71419.1| hypothetical protein ZEAMMB73_805690 [Zea mays]
Length = 831
Score = 90.1 bits (222), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 102/236 (43%), Gaps = 62/236 (26%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALL--------------- 45
MR Q L+ E+A L ++G+AR+R H+Q T LHV LL
Sbjct: 1 MRAGAYTVHQSLTAEAAAALQLSLGLARRRGHAQVTPLHVAYTLLGGSEPPPSSSSPRLF 60
Query: 46 -----CVPS-SLLREACDRVQSYSVSPKLQFRALELCLGVAFDRLPS------------S 87
P+ LL AC R + + P Q RALELC VA +RLP+ S
Sbjct: 61 TTIAASAPAYGLLVRACARSRRQT-HPAQQCRALELCFNVALNRLPTGTANAGGLGSSPS 119
Query: 88 KSVEF-----------PPISNSLMAAIKRSQAQQRRN-----------------PDNYHL 119
+ F P +SN+L+AA+KR+QA QRR +
Sbjct: 120 PATSFAASLLQQQPASPTLSNALVAALKRAQANQRRGCVELQSQPSPPPPPPGQQPHSTT 179
Query: 120 QQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAIIQPSVTQF 175
H QQ +KV+L +++ILDDP SRV EAGF S +K ++ + S
Sbjct: 180 SPSHQQQQPVLTIKVELDQLIVSILDDPSVSRVMREAGFSSAAVKASLEEESAAML 235
>gi|308044249|ref|NP_001183039.1| uncharacterized protein LOC100501371 [Zea mays]
gi|238008946|gb|ACR35508.1| unknown [Zea mays]
Length = 366
Score = 89.7 bits (221), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 165/385 (42%), Gaps = 90/385 (23%)
Query: 466 KAKDDVTALNAKIMELQRKWNDTCQSLHR---------TQLVPKLDIRQRSHVQLSEFVR 516
K +DD L+ KI+ L++KWN+ C LH+ QL P H+ VR
Sbjct: 12 KVRDDQMVLSTKILNLEKKWNEYCVRLHQGCNRINRDPCQLFPH-------HIG----VR 60
Query: 517 LMANRKGSSSKYPSLCESQ------CTNPSPGAHMLSQNISSAEQ-NATIPLSSEANNVN 569
+ R + ++ Q C SP ++ +++IS+ +Q NA + L+ +
Sbjct: 61 VDRERCANPNQSAQTIALQRDIIKPCALSSPYTNITAKSISAPDQINADLVLNLQVRQS- 119
Query: 570 FQSRLPINSSTKPQSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQ 629
+S P+ S P + + ++ KP E ++ A VTTDL L S+ +
Sbjct: 120 -RSNEPLQSGVVPFQHINS--------SNYNKPEESSA----APVTTDLVLATPRGSSFK 166
Query: 630 EAN------------TPKLIDNK--------------EQCFSGSISAEFDAVSEGTFHNV 663
+++ T +L+ NK S S S+ ++ S H+
Sbjct: 167 DSSSALCKRVEDIEETIQLMPNKVDDLNLKPPHLSIQPYTCSKSSSSNWEQTSPSALHST 226
Query: 664 VQSSSCS-------APHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNG 716
+ + +P + FD +YK L L + VG Q+EA+ I ++ R R
Sbjct: 227 SLGGTSAFGQWQRPSPLATQSFDLSNYKLLMEHLFKVVGRQEEALSAICASIVRCR-SME 285
Query: 717 RDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFD 776
R G+N K IW +F GPD + K+++ ALAE++ G+ G LI++D+S
Sbjct: 286 RRRGANKKNDIWFSFYGPDSIAKRRVGVALAELMHGSSGNLIYLDLSLN----------- 334
Query: 777 CQNIDFCDCKLRGKVLVDYIYQEFR 801
D+ + RGK D I++E R
Sbjct: 335 ----DWGNPSFRGKRATDCIFEELR 355
>gi|242067491|ref|XP_002449022.1| hypothetical protein SORBIDRAFT_05g003570 [Sorghum bicolor]
gi|241934865|gb|EES08010.1| hypothetical protein SORBIDRAFT_05g003570 [Sorghum bicolor]
Length = 883
Score = 89.7 bits (221), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 84/167 (50%), Gaps = 32/167 (19%)
Query: 28 RQRRHSQTTSLHVVSALLCVPSSLLREACDRVQSYSVSPKLQFRALELCLGVAFDRLPS- 86
R+R H+Q T LHV SA+L + LLR AC R S+ LQ +ALELC VA +RLP+
Sbjct: 28 RRRGHAQVTPLHVASAMLSA-AGLLRAACLRSHSH----PLQCKALELCFNVALNRLPTA 82
Query: 87 ---SKSVEFPP-----------------ISNSLMAAIKRSQAQQRRNPDNYHLQQIHCNQ 126
+ +V F P +SN+L+AA KR+QA QRR Q
Sbjct: 83 GPAAAAVMFHPHHHHHHAGHGQQHAVPVLSNALVAAFKRAQAHQRRGVVEGVQGQGQGQA 142
Query: 127 QTASLL------KVDLKYFVLAILDDPMASRVFGEAGFLSRDIKLAI 167
KVD++ +++ILDDP SRV EAGF S +K +
Sbjct: 143 PAQPPPQPVLAAKVDIEQLIISILDDPSVSRVMREAGFSSSQVKANV 189
>gi|125583956|gb|EAZ24887.1| hypothetical protein OsJ_08665 [Oryza sativa Japonica Group]
Length = 966
Score = 89.7 bits (221), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 171/441 (38%), Gaps = 79/441 (17%)
Query: 682 DYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRG-IWLAFLGPDKVGKK 740
D K L L E V WQ EA ++ A+++ R G + G R W+ F G D GK
Sbjct: 571 DEKLLVKRLTEAVRWQPEAAAAVAAAITKARSGERKRRGMGPTRADTWVLFSGHDVAGKT 630
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
K+A AL+ VFG + + + + I C RG+ +D +
Sbjct: 631 KMAEALSMSVFGTNAVALRLAGNGGE------PIASC----------RGRTALDCVADAI 674
Query: 801 RSKPYSVVFLEDLDKAADP-IVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
R+ P V+ L+ D D +VQ+S+ +A+ +G+ DS GRDV++ IFV S
Sbjct: 675 RANPLRVIVLDGFDHHDDDRVVQASILRAVESGRLVDSRGRDVALGEAIFVVMS------ 728
Query: 860 HSVHPQTTPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPRKENSNPESRRK 919
+ +R Q H F D+ + V+ RK P+
Sbjct: 729 ----------------LDDTRRCQED----HQFTDSPWNLELRVRNNARKRRPEPQ---- 764
Query: 920 RKRTDDGDSPINSQKQVDDSFRSYLDLNLPA--DEAEEDTS----SEKFDSDTICENSGA 973
GD + +K DS +LDLNL D ++D S S SD E+
Sbjct: 765 -PLDGAGDRRLKPRK---DSPPLHLDLNLSMCEDHTDDDDSGGEESRNSSSDLTVEHEQE 820
Query: 974 W---------------LEDFFDQTDAIAVFQPLNFDLLAEKILREIQPKFQRAFGFEVLL 1018
+ + DA VF+P++F L + + K A G L
Sbjct: 821 YGQPAAAAAKFSAPSSFSELTKAVDATVVFKPVDFGPLKRSVSDVVSAKLGDAAGAGAGL 880
Query: 1019 --EIDYEILVQILAATWLS-DRKKAIENWIENVVLRSFYEVRRK---HHFTAGSVVKLVA 1072
+D +L ++ A W + + ++E W + V+ + +++R + + V L A
Sbjct: 881 SVHVDDGVLDRLAGAAWTAGESATSLEAWADEVLCPTIRQLKRSLSANDVDGATTVSLSA 940
Query: 1073 HEGLLVEEEASGIRLPKIINV 1093
EG G P + V
Sbjct: 941 VEGSGGRRRKDGEVFPTSVTV 961
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 135/329 (41%), Gaps = 63/329 (19%)
Query: 228 KKGK--NPLLVGVCANSALKGFVESVNGGKVGLFPRQIYG-LDVVCVEYEINEFVGGRVN 284
K+GK NP+LVG + V++V V + RQ G V+ + E + V ++
Sbjct: 212 KRGKKRNPVLVGDTVD------VDAVVQEVVTMIQRQRLGNARVISFQREFGDLVD--LD 263
Query: 285 VEMMMLKFKEVESAVGR------CSGPGVVVNYGELKVLVSD------------SVSTEA 326
+ K KE+ A+ GVVVN G L+ LV + V +
Sbjct: 264 RAELAAKIKELGEAIRSELLSPASRSAGVVVNLGNLQWLVEERCVAPGEQEKRRDVVLDT 323
Query: 327 ARFVVSQLTSLLK-SGNGE-KLWLIGAAMSYETYLKMLAKFPGLDNDWDLQLLPIHWKSS 384
AR V+++ +L+ SG E ++W+IG A + TYLK P L+++WDLQ +PI +
Sbjct: 324 ARAAVAEMARILRQSGEREHRVWVIGTA-TCATYLKCQVYHPSLESEWDLQAVPITPRPP 382
Query: 385 LMG----------SFVPFGGFFSSPPDFKNPVRS---KSHYSTLCYLCTEKLEQEVAALL 431
+ V G SS + + + +S +LC C + E+E A +
Sbjct: 383 PPPPSSLGLSPSVNGVNRGILSSSVEVLSSAMTTSAMQSRSPSLCSACLDGYERERADMA 442
Query: 432 K------LESSDSVTDQCLDNLTSSDRIAALDTSKGVGTAKAKDDVTALNAKIMELQRKW 485
L +++ Q L T S D +A+D + EL+R+W
Sbjct: 443 SSPGCGALHATEQPMSQWLQIGTPSSARPPFD--------RAQDKAREAD----ELRRRW 490
Query: 486 NDTCQSLHRTQLVPKLDIRQRSHVQLSEF 514
D C LH R S V SE+
Sbjct: 491 LDRCAQLHSHGGGGCGGGRPSSMVTCSEW 519
>gi|284990567|ref|YP_003409121.1| ATPase AAA-2 domain-containing protein [Geodermatophilus obscurus
DSM 43160]
gi|284063812|gb|ADB74750.1| ATPase AAA-2 domain protein [Geodermatophilus obscurus DSM 43160]
Length = 847
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 98/188 (52%), Gaps = 23/188 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QD+A+ +++AV R R+G G R +GS FLGP VGK ++A AL
Sbjct: 536 LHQRVVGQDDAVRVVAEAVRRSRVGLGDPDRPIGS-------FLFLGPTGVGKTELARAL 588
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKP 804
AE +FG++ ++I +D+S Q + + + + D + + R +P
Sbjct: 589 AEALFGDEDRMIRLDMSEFQERHTVSRLVGSPPGYVGYEDAG--------QLTEAVRRRP 640
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHP 864
YSVV L++++K A P V ++L + + G+ TDS GR V + + TS + G +
Sbjct: 641 YSVVLLDEIEK-AHPDVFNTLLQVLDDGRLTDSQGRTVDFKNTVLIMTSNL--GSELIQG 697
Query: 865 QTTPVKFS 872
+ TP+ F
Sbjct: 698 RNTPLGFG 705
>gi|242084828|ref|XP_002442839.1| hypothetical protein SORBIDRAFT_08g003680 [Sorghum bicolor]
gi|241943532|gb|EES16677.1| hypothetical protein SORBIDRAFT_08g003680 [Sorghum bicolor]
Length = 814
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 97/186 (52%), Gaps = 27/186 (14%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCV--PSSLLREACDR 58
MR+ +Q L+ ++A V+ AV +AR+R H+Q T LHV SA+L V +LLR AC
Sbjct: 1 MRSGGCAVQQELAGDAAAVMRQAVSLARRRGHAQVTPLHVASAVLSVSDAGALLRAAC-- 58
Query: 59 VQSYSVSPKLQFRALELCLGVAFDRLPSSKSV---------------------EFPPISN 97
++S + S LQ +ALELC VA +RL ++ + P +SN
Sbjct: 59 LRSRASSHPLQCKALELCFNVALNRLATTAGMPGPPAPPPAMFQFHHAPAGGHRAPALSN 118
Query: 98 SLMAAIKRSQAQQRRNPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAG 157
+L AA KR+QA QRR + V+L+ V++ILDDP SRV +AG
Sbjct: 119 ALAAAFKRAQANQRRGGGGGGFGVR--RGGRPAPAPVELEQLVISILDDPSVSRVMRDAG 176
Query: 158 FLSRDI 163
F S ++
Sbjct: 177 FASAEV 182
>gi|357152976|ref|XP_003576297.1| PREDICTED: uncharacterized protein LOC100837720 [Brachypodium
distachyon]
Length = 841
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 86/151 (56%), Gaps = 16/151 (10%)
Query: 26 VARQRRHSQTTSLHVVSALLC---VPSS----LLREACDRVQSYSVSPKLQFRALELCLG 78
+AR+R H+Q T LHV +A+L P++ LLR AC R S+S LQ +ALELC
Sbjct: 28 LARRRGHAQVTPLHVATAMLSSSPAPAAPGPGLLRAACLRSSSHSH--PLQCKALELCFN 85
Query: 79 VAFDRLPSS----KSVEFPPISNSLMAAIKRSQAQQRRNP-DNYHLQQIHCNQQTASLLK 133
VA +RLP+S +SN+L+AA KR+QA RR ++ + + K
Sbjct: 86 VALNRLPTSFHGHGGSPTAALSNALVAAFKRAQAHHRRGSGESSSPAPVLAGHGGGT--K 143
Query: 134 VDLKYFVLAILDDPMASRVFGEAGFLSRDIK 164
V+L+ V++ILDDP SRV EAGF S +K
Sbjct: 144 VELEQLVVSILDDPSVSRVMREAGFSSALVK 174
>gi|291452826|ref|ZP_06592216.1| chaperone [Streptomyces albus J1074]
gi|291355775|gb|EFE82677.1| chaperone [Streptomyces albus J1074]
Length = 844
Score = 86.7 bits (213), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASA 745
L AL +V QDEA+ +SQAV R R G G N G +L FLGP VGK ++A A
Sbjct: 514 LEDALHSRVVGQDEAVTAVSQAVRRSRAGMG---DPNRPTGSFL-FLGPTGVGKTELAKA 569
Query: 746 LAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPY 805
LAE++FG++ +++ D+S Q + + + + G+ + ++ R +PY
Sbjct: 570 LAELLFGDENRMVRFDMSEFQEKHTVSRLVGAPP-GYVGHEEAGQ-----LTEKVRRQPY 623
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
SV+ ++++K A P V ++L + + G+ TD+ GR V + + TS I
Sbjct: 624 SVLLFDEIEK-AHPDVFNALLQVLDDGRLTDAQGRTVDFRNTVVIMTSNI 672
>gi|421742208|ref|ZP_16180349.1| ATPase with chaperone activity, ATP-binding subunit [Streptomyces
sp. SM8]
gi|406689392|gb|EKC93272.1| ATPase with chaperone activity, ATP-binding subunit [Streptomyces
sp. SM8]
Length = 864
Score = 86.7 bits (213), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 11/170 (6%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASA 745
L AL +V QDEA+ +SQAV R R G G N G +L FLGP VGK ++A A
Sbjct: 534 LEDALHSRVVGQDEAVTAVSQAVRRSRAGMG---DPNRPTGSFL-FLGPTGVGKTELAKA 589
Query: 746 LAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPY 805
LAE++FG++ +++ D+S Q + + G + ++ R +PY
Sbjct: 590 LAELLFGDENRMVRFDMSEFQEKHTVSRLVGAP------PGYVGHEEAGQLTEKVRRQPY 643
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
SV+ ++++K A P V ++L + + G+ TD+ GR V + + TS I
Sbjct: 644 SVLLFDEIEK-AHPDVFNALLQVLDDGRLTDAQGRTVDFRNTVVIMTSNI 692
>gi|359150593|ref|ZP_09183427.1| chaperone [Streptomyces sp. S4]
Length = 864
Score = 86.7 bits (213), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 11/170 (6%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASA 745
L AL +V QDEA+ +SQAV R R G G N G +L FLGP VGK ++A A
Sbjct: 534 LEDALHSRVVGQDEAVTAVSQAVRRSRAGMG---DPNRPTGSFL-FLGPTGVGKTELAKA 589
Query: 746 LAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPY 805
LAE++FG++ +++ D+S Q + + G + ++ R +PY
Sbjct: 590 LAELLFGDENRMVRFDMSEFQEKHTVSRLVGAP------PGYVGHEEAGQLTEKVRRQPY 643
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
SV+ ++++K A P V ++L + + G+ TD+ GR V + + TS I
Sbjct: 644 SVLLFDEIEK-AHPDVFNALLQVLDDGRLTDAQGRTVDFRNTVVIMTSNI 692
>gi|389865263|ref|YP_006367504.1| genetic competence negative regulator ClpC/MecB [Modestobacter
marinus]
gi|388487467|emb|CCH89025.1| Negative regulator of genetic competence ClpC/MecB [Modestobacter
marinus]
Length = 851
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 22/188 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +++A+ R R G G R +GS FLGP VGK ++A AL
Sbjct: 535 LHERVVGQDEAVEVVAEAIRRSRAGLGDPDRPIGS-------FLFLGPTGVGKTELARAL 587
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKP 804
AE +FG+ +++ +D+S Q + + + + D + + R +P
Sbjct: 588 AEALFGDSDRMVRLDMSEFQERHTVSRLVGSPPGYVGYEDAG--------QLTEAVRRRP 639
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHP 864
YSVV L++++K A P V ++L + + G+ TDS GR V S + + TS L + V+
Sbjct: 640 YSVVLLDEIEK-AHPDVFNTLLQLLDAGRLTDSQGRTVDFSNTVVIMTSN-LGSEAIVNA 697
Query: 865 QTTPVKFS 872
P+ F+
Sbjct: 698 GRGPLGFT 705
>gi|377811246|ref|YP_005043686.1| ATPase [Burkholderia sp. YI23]
gi|357940607|gb|AET94163.1| ATPase [Burkholderia sp. YI23]
Length = 910
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 33/215 (15%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V QDEA+ +S AV R R G G N ++L FLGP VGK ++A ALAE+
Sbjct: 591 LHKRVIGQDEAVEAVSDAVRRARTGLQ---GRNRPIAVFL-FLGPTGVGKTELAKALAEV 646
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
VFG++ ++ VD+S + + G V D + + R +PYS
Sbjct: 647 VFGDEDAMLRVDMSEYMERHAVSRLIGSPP---------GYVGYDEGGQLTERVRRRPYS 697
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
V+ L++++K A P V + L + G+ TD GR V S + +ATS +
Sbjct: 698 VILLDEIEK-AHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTLIIATSNL----------- 745
Query: 867 TPVKFSEEIILGAKRWQMQTAISHGFADAARGSGM 901
++I G KR + S ADA+ SG+
Sbjct: 746 -----GSDVIAGQKRATLGFTASATDADASLQSGV 775
>gi|256389896|ref|YP_003111460.1| ATPase AAA [Catenulispora acidiphila DSM 44928]
gi|256356122|gb|ACU69619.1| ATPase AAA-2 domain protein [Catenulispora acidiphila DSM 44928]
Length = 841
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASA 745
L AL ++V Q+EA+ I++AV R R G G N G +L FLGP VGK ++A A
Sbjct: 532 LEDALHDRVVGQEEAVTAIAEAVRRSRAGMG---DPNRPTGSFL-FLGPTGVGKTELAKA 587
Query: 746 LAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPY 805
LAE++FG++ +LI D+S Q + + + + G+ + + R KPY
Sbjct: 588 LAELLFGDEDRLIRFDMSEFQEKHTVSRLLGSPP-GYVGYEEAGQ-----LTERVRRKPY 641
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
SV+ ++++KA P + ++L + + G+ TD+ GR V + + TS I
Sbjct: 642 SVILFDEVEKAH-PDIFNTLLQVLDDGRLTDAQGRTVDFRHTVVIMTSNI 690
>gi|294816447|ref|ZP_06775090.1| chaperone [Streptomyces clavuligerus ATCC 27064]
gi|294329046|gb|EFG10689.1| chaperone [Streptomyces clavuligerus ATCC 27064]
Length = 860
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 89/170 (52%), Gaps = 11/170 (6%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASA 745
L AL E+V QDEA+ +SQAV R R G G + G +L FLGP VGK ++A A
Sbjct: 520 LEDALHERVIGQDEAVVAVSQAVRRGRAGMG---DPDRPTGSFL-FLGPTGVGKTELAKA 575
Query: 746 LAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPY 805
LA+++FG+ ++I D+S Q + + + + G+ + + R KPY
Sbjct: 576 LAQLLFGDADRMIRFDMSEFQEKHTVSRLVGSPP-GYVGYEEAGQ-----LTEAVRRKPY 629
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
SVV ++++K A P V L + + G+ TD+ GR V + + TS I
Sbjct: 630 SVVLFDEVEK-AHPDVFHLLLQVLDDGRLTDAQGRTVDFRHTVVIMTSNI 678
>gi|88602573|ref|YP_502751.1| ATPase AAA [Methanospirillum hungatei JF-1]
gi|88188035|gb|ABD41032.1| ATPase AAA-2 [Methanospirillum hungatei JF-1]
Length = 865
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 97/194 (50%), Gaps = 17/194 (8%)
Query: 685 TLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIA 743
TL L ++V QDEAI +S A+ R R G S+SKR I FLG VGK ++A
Sbjct: 561 TLEAELHKRVVGQDEAIRAVSDAIRRSRAG-----LSDSKRPIGSFIFLGTTGVGKTELA 615
Query: 744 SALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSK 803
ALAE +F N+ ++ +D+S Q + + + + G+ + + R K
Sbjct: 616 KALAEFLFNNENSMVRIDMSEYQERHTVSRLVGAPP-GYVGYEESGQ-----LTEAVRRK 669
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVH 863
PYSVV L++++K A P V + L + + G+ TD+ GR V I + TS I G H +
Sbjct: 670 PYSVVLLDEIEK-AHPDVFNILLQVLDDGRLTDNKGRTVDFKNTIIIMTSNI--GSHIIQ 726
Query: 864 PQTTPV--KFSEEI 875
V K EEI
Sbjct: 727 ENLEHVTDKNREEI 740
>gi|340356808|ref|ZP_08679449.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Sporosarcina
newyorkensis 2681]
gi|339620146|gb|EGQ24717.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Sporosarcina
newyorkensis 2681]
Length = 817
Score = 83.2 bits (204), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 23/198 (11%)
Query: 667 SSCSAPHTGEPFDP----RDYKTLRIA--LAEKVGWQDEAICTISQAVSRWRIG---NGR 717
++ A TG P D K L++ L E+V Q+EA+ IS+A+ R R G R
Sbjct: 480 AAVVAMWTGVPVDKIAETESAKLLKMEEILHERVIGQNEAVLAISRAIRRARAGLKDPKR 539
Query: 718 DVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC 777
+GS FLGP VGK ++A ALAE++FG++ +I +D+ SE S
Sbjct: 540 PIGS-------FIFLGPTGVGKTELARALAEVMFGDEDAMIRIDM-SEYMEKHATSRLVG 591
Query: 778 QNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDS 837
+ + G+ + ++ R KPYSVV L++++K A P V + L + + G+ TDS
Sbjct: 592 SPPGYVGYEEGGQ-----LTEKVRRKPYSVVLLDEIEK-AHPDVFNILLQVLEDGRLTDS 645
Query: 838 YGRDVSISGMIFVATSTI 855
GR V + + TS +
Sbjct: 646 KGRTVDFRNTVMIMTSNV 663
>gi|386381698|ref|ZP_10067407.1| ATPase AAA [Streptomyces tsukubaensis NRRL18488]
gi|385670840|gb|EIF93874.1| ATPase AAA [Streptomyces tsukubaensis NRRL18488]
Length = 867
Score = 83.2 bits (204), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 11/170 (6%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASA 745
L +L E+V Q+EA+ +SQAV R R G G + G +L FLGP VGK ++A A
Sbjct: 540 LEDSLHERVVGQEEAVTAVSQAVRRGRAGMG---DPDRPTGSFL-FLGPTGVGKTELAKA 595
Query: 746 LAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPY 805
LAE++FG+ +++ D+S Q + + + + G+ + + R KPY
Sbjct: 596 LAELLFGDADRMVRFDMSEFQERHTVSRLVGSPP-GYIGYEEAGQ-----LTEAVRRKPY 649
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
SVV ++++K A P V + L + + G+ TD+ GR V + + TS I
Sbjct: 650 SVVLFDEVEK-AHPDVFNLLLQVLDDGRLTDAQGRTVDFRHTVVIMTSNI 698
>gi|121489777|emb|CAK18860.1| heat shock protein (HSP101) precursor [Phillyrea latifolia]
Length = 127
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 70/121 (57%), Gaps = 15/121 (12%)
Query: 100 MAAIKRSQAQQRRNPDNYHL-QQIHCNQQTASLLKVDLKYFVLAILDDPMASRVFGEAGF 158
MAAIKRSQA QRR P+N+ QQ + + + ++KV+L+ +++ILDDP+ SRVFGEAGF
Sbjct: 1 MAAIKRSQANQRRQPENFSFYQQQYSSCSSVPVVKVELRNLIISILDDPLVSRVFGEAGF 60
Query: 159 LSRDIKLAIIQP-------SVTQFPPRLSLTRCPPIFLYNLTDSFPG------RAGLKLP 205
S DIK+A + P + + R + + PP+FL N S R G P
Sbjct: 61 RSCDIKIATLTPINNFHGHHLFGYSSRYTRPQ-PPLFLCNFNASNGSNEISMTRKGFSFP 119
Query: 206 F 206
F
Sbjct: 120 F 120
>gi|319789343|ref|YP_004150976.1| ATPase AAA-2 domain protein [Thermovibrio ammonificans HB-1]
gi|317113845|gb|ADU96335.1| ATPase AAA-2 domain protein [Thermovibrio ammonificans HB-1]
Length = 824
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 95/183 (51%), Gaps = 13/183 (7%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKI 742
K L L ++V Q EA+ +++A+ R R+G + +N R I FLGP VGK ++
Sbjct: 497 KRLEEELHKRVVGQHEAVEAVAKAIKRSRLG----IRANVNRPIGCFLFLGPTGVGKTEL 552
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A ALAE +FG++ LI +D+S + + + + G+ + + R
Sbjct: 553 AKALAEYLFGDEKALIRIDMSEYMEKHSVSRLIGSPP-GYVGYEEGGQ-----LTEAVRR 606
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYSV+ L++++K A P V + L + + G+ TD GR VS + I + TS L KH +
Sbjct: 607 KPYSVILLDEIEK-AHPDVLNILLQIMEDGRLTDGLGRTVSFTNTILIMTSN-LGAKHLI 664
Query: 863 HPQ 865
Q
Sbjct: 665 SAQ 667
>gi|219852795|ref|YP_002467227.1| ATP-dependent chaperone ClpB [Methanosphaerula palustris E1-9c]
gi|219547054|gb|ACL17504.1| ATP-dependent chaperone ClpB [Methanosphaerula palustris E1-9c]
Length = 863
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 19/182 (10%)
Query: 685 TLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKK 741
+L + L ++V Q+EAI +S A+ R R G R +GS FLG VGK +
Sbjct: 559 SLEVELHKRVVGQEEAIGAVSDAIRRSRAGLQDTKRPIGS-------FIFLGTTGVGKTE 611
Query: 742 IASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFR 801
+A ALAEI+F N+ ++ +D+S Q + + + + G+ + + R
Sbjct: 612 LAKALAEILFNNENSMVRIDMSEYQERHTVSRLIGAPP-GYVGYEESGQ-----LTEAVR 665
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHS 861
KPYSVV L++++K A P V + L + + G+ TD+ GR V I + TS I G H
Sbjct: 666 RKPYSVVLLDEIEK-AHPDVFNILLQVLDDGRLTDNKGRTVDFKNTIIIMTSNI--GSHI 722
Query: 862 VH 863
+
Sbjct: 723 IQ 724
>gi|419799744|ref|ZP_14325072.1| Clp amino terminal domain protein [Streptococcus parasanguinis
F0449]
gi|385697244|gb|EIG27681.1| Clp amino terminal domain protein [Streptococcus parasanguinis
F0449]
Length = 809
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G N R +GS FLGP
Sbjct: 498 DAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR + S I
Sbjct: 598 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|306826128|ref|ZP_07459463.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sp. oral taxon 071 str. 73H25AP]
gi|304431604|gb|EFM34585.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sp. oral taxon 071 str. 73H25AP]
Length = 810
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVIFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|357401726|ref|YP_004913651.1| class III stress response-related ATPase, AAA+ superfamily
[Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386357788|ref|YP_006056034.1| Clp protease ATP binding subunit [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337768135|emb|CCB76848.1| class III stress response-related ATPase, AAA+ superfamily
[Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365808296|gb|AEW96512.1| Clp protease ATP binding subunit [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 825
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 92/174 (52%), Gaps = 19/174 (10%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKI 742
L AL ++V QDEA+ +++AV R R G G R VGS FLGP VGK ++
Sbjct: 525 LEDALHQRVVGQDEAVTAVAEAVRRNRAGLGDPDRPVGS-------FLFLGPTGVGKTEL 577
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A ALAE++FG++ +LI D+S Q + + + + G+ + + R
Sbjct: 578 AKALAELLFGDEDRLIRFDMSEFQERHTVSRLVGAPP-GYVGHEEAGQ-----LTEAVRR 631
Query: 803 KPYSVVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYSV+ ++++KA AD V + L + + G+ TD+ GR V + + TS I
Sbjct: 632 KPYSVLLFDEVEKAHAD--VFNLLLQVLDDGRLTDAQGRTVDFRNTVVIMTSNI 683
>gi|417936448|ref|ZP_12579762.1| Clp amino terminal domain protein [Streptococcus infantis X]
gi|343400883|gb|EGV13392.1| Clp amino terminal domain protein [Streptococcus infantis X]
Length = 810
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ +IS+A+ R + G N R +GS FLGP
Sbjct: 499 DAKKYLNLETELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|417918051|ref|ZP_12561604.1| Clp amino terminal domain protein [Streptococcus parasanguinis
SK236]
gi|342829042|gb|EGU63403.1| Clp amino terminal domain protein [Streptococcus parasanguinis
SK236]
Length = 809
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G N R +GS FLGP
Sbjct: 498 DAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR + S I
Sbjct: 598 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|312866922|ref|ZP_07727135.1| chaperone protein ClpB [Streptococcus parasanguinis F0405]
gi|311097705|gb|EFQ55936.1| chaperone protein ClpB [Streptococcus parasanguinis F0405]
Length = 809
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G N R +GS FLGP
Sbjct: 498 DAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR + S I
Sbjct: 598 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|414156400|ref|ZP_11412702.1| hypothetical protein HMPREF9186_01122 [Streptococcus sp. F0442]
gi|410870047|gb|EKS18006.1| hypothetical protein HMPREF9186_01122 [Streptococcus sp. F0442]
Length = 809
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G N R +GS FLGP
Sbjct: 498 DAKKYLNLETELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR + S I
Sbjct: 598 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|421277771|ref|ZP_15728586.1| exopolyphosphatase [Streptococcus mitis SPAR10]
gi|395873595|gb|EJG84686.1| exopolyphosphatase [Streptococcus mitis SPAR10]
Length = 810
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ +IS+A+ R + G N R +GS FLGP
Sbjct: 499 DAKKYLNLETELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|322387004|ref|ZP_08060617.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
infantis ATCC 700779]
gi|419844139|ref|ZP_14367439.1| Clp amino terminal domain protein [Streptococcus infantis ATCC
700779]
gi|321142148|gb|EFX37640.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
infantis ATCC 700779]
gi|385702161|gb|EIG39311.1| Clp amino terminal domain protein [Streptococcus infantis ATCC
700779]
Length = 810
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ +IS+A+ R + G N R +GS FLGP
Sbjct: 499 DAKKYLNLETELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|239916624|ref|YP_002956182.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|281414926|ref|ZP_06246668.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|239837831|gb|ACS29628.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
Length = 875
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 91/179 (50%), Gaps = 19/179 (10%)
Query: 685 TLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKK 741
TL L E+V QDEAI +S A+ R R G R +GS FLGP VGK +
Sbjct: 569 TLDATLKERVVGQDEAITLVSDAIIRARSGIRDPRRPIGS-------FIFLGPTGVGKTE 621
Query: 742 IASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFR 801
+A ALAE +F ++ +I +D+S Q + + + + G+ + + R
Sbjct: 622 LAKALAEALFDSESAMIRLDMSEYQERHTVSRLVGAPP-GYVGYEEGGQ-----LTEAVR 675
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKH 860
+PYSVV L++++K A P V ++L + + G+ TDS GR V I + TS I G H
Sbjct: 676 RRPYSVVLLDEIEK-AHPDVFNTLLQVLDDGRITDSQGRTVDFRNTIIIMTSNI--GAH 731
>gi|322391259|ref|ZP_08064730.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
peroris ATCC 700780]
gi|321145863|gb|EFX41253.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
peroris ATCC 700780]
Length = 819
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ +IS+A+ R + G N R +GS FLGP
Sbjct: 508 DAKKYLNLEAELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGS-------FMFLGPT 560
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 561 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 607
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 608 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 666
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 667 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 696
>gi|322390400|ref|ZP_08063922.1| exopolyphosphatase [Streptococcus parasanguinis ATCC 903]
gi|321142911|gb|EFX38367.1| exopolyphosphatase [Streptococcus parasanguinis ATCC 903]
Length = 809
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G N R +GS FLGP
Sbjct: 498 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR + S I
Sbjct: 598 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|337282845|ref|YP_004622316.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
parasanguinis ATCC 15912]
gi|387880440|ref|YP_006310743.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
parasanguinis FW213]
gi|335370438|gb|AEH56388.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
parasanguinis ATCC 15912]
gi|386793888|gb|AFJ26923.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
parasanguinis FW213]
Length = 809
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G N R +GS FLGP
Sbjct: 498 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR + S I
Sbjct: 598 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|307702569|ref|ZP_07639521.1| clpC [Streptococcus oralis ATCC 35037]
gi|307623685|gb|EFO02670.1| clpC [Streptococcus oralis ATCC 35037]
Length = 810
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 35/212 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEEII 876
+ TS T L+ +V ++F +E I
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQENI 689
>gi|293364467|ref|ZP_06611193.1| ATP-dependent Clp protease [Streptococcus oralis ATCC 35037]
gi|291317313|gb|EFE57740.1| ATP-dependent Clp protease [Streptococcus oralis ATCC 35037]
Length = 776
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 35/212 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 465 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 517
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 518 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 564
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 565 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 623
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEEII 876
+ TS T L+ +V ++F +E I
Sbjct: 624 IIMTSNLGATALRDDKTVGFGAKDIRFDQENI 655
>gi|335030235|ref|ZP_08523729.1| chaperone protein ClpB [Streptococcus infantis SK1076]
gi|334266666|gb|EGL85140.1| chaperone protein ClpB [Streptococcus infantis SK1076]
Length = 810
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ +IS+A+ R + G N R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|415750498|ref|ZP_11478340.1| clpC [Streptococcus pneumoniae SV35]
gi|415753392|ref|ZP_11480374.1| clpC [Streptococcus pneumoniae SV36]
gi|381309039|gb|EIC49882.1| clpC [Streptococcus pneumoniae SV36]
gi|381316348|gb|EIC57098.1| clpC [Streptococcus pneumoniae SV35]
Length = 810
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGASPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|270291875|ref|ZP_06198090.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M143]
gi|270279403|gb|EFA25245.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M143]
Length = 810
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|306828654|ref|ZP_07461847.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
mitis ATCC 6249]
gi|304429160|gb|EFM32247.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
mitis ATCC 6249]
Length = 810
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|401683711|ref|ZP_10815596.1| Clp amino terminal domain protein [Streptococcus sp. BS35b]
gi|400186751|gb|EJO20956.1| Clp amino terminal domain protein [Streptococcus sp. BS35b]
Length = 810
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|289168872|ref|YP_003447141.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
mitis B6]
gi|288908439|emb|CBJ23281.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
mitis B6]
Length = 810
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|417935180|ref|ZP_12578500.1| ATPase, AAA family [Streptococcus mitis bv. 2 str. F0392]
gi|340771750|gb|EGR94265.1| ATPase, AAA family [Streptococcus mitis bv. 2 str. F0392]
Length = 810
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|358465211|ref|ZP_09175162.1| ATPase family [Streptococcus sp. oral taxon 058 str. F0407]
gi|357065969|gb|EHI76139.1| ATPase family [Streptococcus sp. oral taxon 058 str. F0407]
Length = 810
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|417923255|ref|ZP_12566725.1| Clp amino terminal domain protein [Streptococcus mitis SK569]
gi|342837188|gb|EGU71386.1| Clp amino terminal domain protein [Streptococcus mitis SK569]
Length = 810
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|15904041|ref|NP_359591.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae R6]
gi|421267182|ref|ZP_15718059.1| AAA domain family protein [Streptococcus pneumoniae SPAR27]
gi|15459704|gb|AAL00802.1| Class III stress response-related ATPase, truncation [Streptococcus
pneumoniae R6]
gi|395865567|gb|EJG76706.1| AAA domain family protein [Streptococcus pneumoniae SPAR27]
Length = 762
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|169834204|ref|YP_001695552.1| chaperone ClpB 1 [Streptococcus pneumoniae Hungary19A-6]
gi|168996706|gb|ACA37318.1| chaperone ClpB 1 [Streptococcus pneumoniae Hungary19A-6]
Length = 810
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|419818004|ref|ZP_14342123.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus sp.
GMD4S]
gi|404465173|gb|EKA10663.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus sp.
GMD4S]
Length = 810
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|417793983|ref|ZP_12441246.1| chaperone protein ClpB [Streptococcus oralis SK255]
gi|334271093|gb|EGL89487.1| chaperone protein ClpB [Streptococcus oralis SK255]
Length = 810
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|419767404|ref|ZP_14293559.1| Clp amino terminal domain protein [Streptococcus mitis SK579]
gi|383353144|gb|EID30769.1| Clp amino terminal domain protein [Streptococcus mitis SK579]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|417916971|ref|ZP_12560537.1| chaperone protein ClpB [Streptococcus mitis bv. 2 str. SK95]
gi|342827718|gb|EGU62100.1| chaperone protein ClpB [Streptococcus mitis bv. 2 str. SK95]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGVKDIRFDQE 687
>gi|419779161|ref|ZP_14305039.1| ATPase, AAA family [Streptococcus oralis SK10]
gi|383186528|gb|EIC78996.1| ATPase, AAA family [Streptococcus oralis SK10]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|417938004|ref|ZP_12581303.1| ATPase, AAA family [Streptococcus infantis SK970]
gi|343391645|gb|EGV04219.1| ATPase, AAA family [Streptococcus infantis SK970]
Length = 485
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ +IS+A+ R + G N R +GS FLGP
Sbjct: 240 DAKKYLNLEAELHKRVIGQEQAVSSISRAIRRNQSGIRNNKRPIGS-------FMFLGPT 292
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 293 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 339
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 340 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 398
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 399 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 428
>gi|418203436|ref|ZP_12839859.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
gi|353864884|gb|EHE44794.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|325295444|ref|YP_004281958.1| ATPase AAA [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065892|gb|ADY73899.1| ATPase AAA-2 domain protein [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 820
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 100/185 (54%), Gaps = 15/185 (8%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKK 740
K LR+ L ++V Q+EA+ +++A+ R R+G + S+++R I FLGP VGK
Sbjct: 495 KLLRLEGELHKRVVGQEEAVKAVAKAIKRSRLG----IRSSAQRPIGSFLFLGPTGVGKT 550
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++A ALAE +FG++ +I +D+S + + + + G+ + +
Sbjct: 551 ELAKALAEALFGDEKAMIRIDMSEYMEKHTVSRLIGAPP-GYIGYEEGGQ-----LTEAV 604
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKH 860
R KPY+V+ L++++K A P V + L + + G+ TD GR VS + I + TS L KH
Sbjct: 605 RRKPYTVILLDEIEK-AHPDVLNILLQIMEDGRLTDGLGRTVSFTNAILIMTSN-LGAKH 662
Query: 861 SVHPQ 865
+ Q
Sbjct: 663 LISSQ 667
>gi|148991946|ref|ZP_01821720.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP9-BS68]
gi|421221379|ref|ZP_15678210.1| clpC [Streptococcus pneumoniae 2070425]
gi|421223635|ref|ZP_15680412.1| clpC [Streptococcus pneumoniae 2070531]
gi|147928995|gb|EDK80006.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP9-BS68]
gi|395584367|gb|EJG44760.1| clpC [Streptococcus pneumoniae 2070425]
gi|395586094|gb|EJG46472.1| clpC [Streptococcus pneumoniae 2070531]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|418196859|ref|ZP_12833330.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47688]
gi|353858891|gb|EHE38850.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47688]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|322375169|ref|ZP_08049683.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. C300]
gi|321280669|gb|EFX57708.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. C300]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|168486303|ref|ZP_02710811.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1087-00]
gi|418185965|ref|ZP_12822500.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47283]
gi|419511380|ref|ZP_14051018.1| AAA domain family protein [Streptococcus pneumoniae NP141]
gi|419531233|ref|ZP_14070756.1| AAA domain family protein [Streptococcus pneumoniae GA40028]
gi|421214175|ref|ZP_15671125.1| clpC [Streptococcus pneumoniae 2070108]
gi|421216257|ref|ZP_15673174.1| clpC [Streptococcus pneumoniae 2070109]
gi|183570676|gb|EDT91204.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1087-00]
gi|353846558|gb|EHE26587.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47283]
gi|379570061|gb|EHZ35026.1| AAA domain family protein [Streptococcus pneumoniae GA40028]
gi|379630460|gb|EHZ95046.1| AAA domain family protein [Streptococcus pneumoniae NP141]
gi|395577921|gb|EJG38450.1| clpC [Streptococcus pneumoniae 2070108]
gi|395578646|gb|EJG39160.1| clpC [Streptococcus pneumoniae 2070109]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|421489259|ref|ZP_15936642.1| ATPase, AAA family [Streptococcus oralis SK304]
gi|400366262|gb|EJP19297.1| ATPase, AAA family [Streptococcus oralis SK304]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|315612206|ref|ZP_07887120.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis ATCC 49296]
gi|315315599|gb|EFU63637.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis ATCC 49296]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|418968298|ref|ZP_13519916.1| Clp amino terminal domain protein [Streptococcus mitis SK616]
gi|383340682|gb|EID18974.1| Clp amino terminal domain protein [Streptococcus mitis SK616]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|419781955|ref|ZP_14307766.1| ATPase, AAA family [Streptococcus oralis SK610]
gi|383183596|gb|EIC76131.1| ATPase, AAA family [Streptococcus oralis SK610]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|307707859|ref|ZP_07644336.1| ClpC [Streptococcus mitis NCTC 12261]
gi|307616119|gb|EFN95315.1| ClpC [Streptococcus mitis NCTC 12261]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|15902001|ref|NP_346605.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
pneumoniae TIGR4]
gi|111657990|ref|ZP_01408696.1| hypothetical protein SpneT_02000846 [Streptococcus pneumoniae
TIGR4]
gi|418131364|ref|ZP_12768244.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07643]
gi|418188194|ref|ZP_12824712.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47360]
gi|418231032|ref|ZP_12857626.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae EU-NP01]
gi|419478855|ref|ZP_14018674.1| AAA domain family protein [Streptococcus pneumoniae GA18068]
gi|14973705|gb|AAK76245.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae TIGR4]
gi|353800779|gb|EHD81088.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07643]
gi|353848003|gb|EHE28022.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47360]
gi|353884342|gb|EHE64142.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae EU-NP01]
gi|379563127|gb|EHZ28132.1| AAA domain family protein [Streptococcus pneumoniae GA18068]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|421290761|ref|ZP_15741508.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA54354]
gi|421306157|ref|ZP_15756808.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62331]
gi|395885665|gb|EJG96687.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA54354]
gi|395903841|gb|EJH14764.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62331]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|421228460|ref|ZP_15685153.1| clpC [Streptococcus pneumoniae 2072047]
gi|395592354|gb|EJG52625.1| clpC [Streptococcus pneumoniae 2072047]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|418194749|ref|ZP_12831235.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47439]
gi|418203447|ref|ZP_12839869.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
gi|419456451|ref|ZP_13996405.1| AAA domain family protein [Streptococcus pneumoniae EU-NP04]
gi|421286520|ref|ZP_15737291.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60190]
gi|353854888|gb|EHE34859.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47439]
gi|353864578|gb|EHE44490.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA52306]
gi|379626414|gb|EHZ91032.1| AAA domain family protein [Streptococcus pneumoniae EU-NP04]
gi|395884758|gb|EJG95794.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60190]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|421282187|ref|ZP_15732980.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04672]
gi|395878634|gb|EJG89697.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04672]
Length = 804
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 493 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 545
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 546 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 592
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 593 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 651
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 652 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 681
>gi|421218984|ref|ZP_15675871.1| clpC [Streptococcus pneumoniae 2070335]
gi|395581581|gb|EJG42052.1| clpC [Streptococcus pneumoniae 2070335]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|418201146|ref|ZP_12837585.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47976]
gi|419524681|ref|ZP_14064250.1| AAA domain family protein [Streptococcus pneumoniae GA13723]
gi|421243972|ref|ZP_15700481.1| clpC [Streptococcus pneumoniae 2081074]
gi|353862579|gb|EHE42510.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47976]
gi|379554905|gb|EHZ19977.1| AAA domain family protein [Streptococcus pneumoniae GA13723]
gi|395605648|gb|EJG65767.1| clpC [Streptococcus pneumoniae 2081074]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|421246491|ref|ZP_15702981.1| clpC [Streptococcus pneumoniae 2082170]
gi|395616101|gb|EJG76114.1| clpC [Streptococcus pneumoniae 2082170]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|421226057|ref|ZP_15682790.1| clpC [Streptococcus pneumoniae 2070768]
gi|395587868|gb|EJG48207.1| clpC [Streptococcus pneumoniae 2070768]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|318077308|ref|ZP_07984640.1| chaperone [Streptomyces sp. SA3_actF]
Length = 806
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKI 742
L AL +V Q+EA+ ++QAV R R G G R VGS FLGP VGK ++
Sbjct: 503 LEEALHSRVVGQEEAVTAVAQAVRRNRAGMGDPDRPVGS-------FLFLGPTGVGKTEL 555
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A ALAE++FG++ +++ D+S Q + + + + G+ + ++ R
Sbjct: 556 AKALAELLFGDENRMVRFDMSEFQEKHTVSRLVGAPP-GYVGHEEAGQ-----LTEKVRR 609
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSV+ ++++K A P V ++L + + G+ TD+ GR V + + TS I
Sbjct: 610 SPYSVLLFDEVEK-AHPDVFNTLLQVLDDGRLTDAQGRTVDFRHTVVIMTSNI 661
>gi|387627321|ref|YP_006063497.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV104]
gi|417695067|ref|ZP_12344251.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47901]
gi|444381647|ref|ZP_21179853.1| ATPase family [Streptococcus pneumoniae PCS8106]
gi|444385299|ref|ZP_21183378.1| ATPase family [Streptococcus pneumoniae PCS8203]
gi|301795107|emb|CBW37577.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV104]
gi|332199016|gb|EGJ13097.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47901]
gi|444250579|gb|ELU57058.1| ATPase family [Streptococcus pneumoniae PCS8203]
gi|444253899|gb|ELU60346.1| ATPase family [Streptococcus pneumoniae PCS8106]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|149003057|ref|ZP_01827966.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS69]
gi|149020113|ref|ZP_01835087.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP23-BS72]
gi|237650487|ref|ZP_04524739.1| chaperone ClpB 1 [Streptococcus pneumoniae CCRI 1974]
gi|237822387|ref|ZP_04598232.1| chaperone ClpB 1 [Streptococcus pneumoniae CCRI 1974M2]
gi|418144802|ref|ZP_12781597.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13494]
gi|419458740|ref|ZP_13998679.1| AAA domain family protein [Streptococcus pneumoniae GA02254]
gi|147758798|gb|EDK65794.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS69]
gi|147930791|gb|EDK81772.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP23-BS72]
gi|353807268|gb|EHD87540.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13494]
gi|379528736|gb|EHY93990.1| AAA domain family protein [Streptococcus pneumoniae GA02254]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|322377948|ref|ZP_08052436.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M334]
gi|321281124|gb|EFX58136.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. M334]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|307705869|ref|ZP_07642707.1| chaperone clpB 1 [Streptococcus mitis SK597]
gi|307620530|gb|EFN99628.1| chaperone clpB 1 [Streptococcus mitis SK597]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|168494045|ref|ZP_02718188.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC3059-06]
gi|418079648|ref|ZP_12716867.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 4027-06]
gi|418081852|ref|ZP_12719058.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6735-05]
gi|418090572|ref|ZP_12727722.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43265]
gi|418099535|ref|ZP_12736628.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6901-05]
gi|418106335|ref|ZP_12743385.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44500]
gi|418115713|ref|ZP_12752696.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5787-06]
gi|418117883|ref|ZP_12754849.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6963-05]
gi|418135979|ref|ZP_12772828.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11426]
gi|418174625|ref|ZP_12811231.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41277]
gi|419434821|ref|ZP_13974935.1| AAA domain family protein [Streptococcus pneumoniae GA40183]
gi|419441395|ref|ZP_13981435.1| AAA domain family protein [Streptococcus pneumoniae GA40410]
gi|419465504|ref|ZP_14005392.1| AAA domain family protein [Streptococcus pneumoniae GA04175]
gi|183575907|gb|EDT96435.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC3059-06]
gi|353745391|gb|EHD26061.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 4027-06]
gi|353750174|gb|EHD30816.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6735-05]
gi|353759572|gb|EHD40156.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43265]
gi|353767755|gb|EHD48287.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6901-05]
gi|353774297|gb|EHD54790.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44500]
gi|353783676|gb|EHD64103.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5787-06]
gi|353787084|gb|EHD67493.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 6963-05]
gi|353834711|gb|EHE14809.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41277]
gi|353899826|gb|EHE75393.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11426]
gi|379535630|gb|EHZ00828.1| AAA domain family protein [Streptococcus pneumoniae GA04175]
gi|379575063|gb|EHZ40000.1| AAA domain family protein [Streptococcus pneumoniae GA40183]
gi|379576052|gb|EHZ40981.1| AAA domain family protein [Streptococcus pneumoniae GA40410]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|148988840|ref|ZP_01820255.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP6-BS73]
gi|147925651|gb|EDK76727.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP6-BS73]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|419780450|ref|ZP_14306299.1| ATPase, AAA family [Streptococcus oralis SK100]
gi|383185250|gb|EIC77747.1| ATPase, AAA family [Streptococcus oralis SK100]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|418172353|ref|ZP_12808970.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19451]
gi|353833556|gb|EHE13666.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19451]
Length = 804
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 493 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 545
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 546 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 592
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 593 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 651
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 652 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 681
>gi|307711182|ref|ZP_07647604.1| clpC [Streptococcus mitis SK321]
gi|307617144|gb|EFN96322.1| clpC [Streptococcus mitis SK321]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|302522782|ref|ZP_07275124.1| ATP-dependent chaperone ClpB [Streptomyces sp. SPB78]
gi|302431677|gb|EFL03493.1| ATP-dependent chaperone ClpB [Streptomyces sp. SPB78]
Length = 845
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKI 742
L AL +V Q+EA+ ++QAV R R G G R VGS FLGP VGK ++
Sbjct: 536 LEEALHSRVVGQEEAVTAVAQAVRRNRAGMGDPDRPVGS-------FLFLGPTGVGKTEL 588
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A ALAE++FG++ +++ D+S Q + + + + G+ + ++ R
Sbjct: 589 AKALAELLFGDENRMVRFDMSEFQEKHTVSRLVGAPP-GYVGHEEAGQ-----LTEKVRR 642
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSV+ ++++K A P V ++L + + G+ TD+ GR V + + TS I
Sbjct: 643 SPYSVLLFDEVEK-AHPDVFNTLLQVLDDGRLTDAQGRTVDFRHTVVIMTSNI 694
>gi|414157618|ref|ZP_11413915.1| hypothetical protein HMPREF9188_00189 [Streptococcus sp. F0441]
gi|410872054|gb|EKS19999.1| hypothetical protein HMPREF9188_00189 [Streptococcus sp. F0441]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|421271635|ref|ZP_15722485.1| AAA domain family protein [Streptococcus pneumoniae SPAR48]
gi|395865774|gb|EJG76912.1| AAA domain family protein [Streptococcus pneumoniae SPAR48]
Length = 795
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 484 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 536
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 537 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 583
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 584 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 642
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 643 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 672
>gi|419509280|ref|ZP_14048928.1| AAA domain family protein [Streptococcus pneumoniae GA49542]
gi|379609571|gb|EHZ74309.1| AAA domain family protein [Streptococcus pneumoniae GA49542]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|225859966|ref|YP_002741476.1| ClpB protein [Streptococcus pneumoniae 70585]
gi|225721797|gb|ACO17651.1| ClpB protein [Streptococcus pneumoniae 70585]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|194398319|ref|YP_002038791.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
pneumoniae G54]
gi|418122270|ref|ZP_12759210.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44194]
gi|419481010|ref|ZP_14020811.1| AAA domain family protein [Streptococcus pneumoniae GA19101]
gi|419492127|ref|ZP_14031858.1| AAA domain family protein [Streptococcus pneumoniae GA47179]
gi|419500710|ref|ZP_14040401.1| AAA domain family protein [Streptococcus pneumoniae GA47597]
gi|419533394|ref|ZP_14072906.1| AAA domain family protein [Streptococcus pneumoniae GA47794]
gi|421276047|ref|ZP_15726873.1| AAA domain family protein [Streptococcus pneumoniae GA52612]
gi|194357986|gb|ACF56434.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae G54]
gi|353790599|gb|EHD70981.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44194]
gi|379569176|gb|EHZ34150.1| AAA domain family protein [Streptococcus pneumoniae GA19101]
gi|379591208|gb|EHZ56037.1| AAA domain family protein [Streptococcus pneumoniae GA47179]
gi|379597822|gb|EHZ62619.1| AAA domain family protein [Streptococcus pneumoniae GA47597]
gi|379604297|gb|EHZ69058.1| AAA domain family protein [Streptococcus pneumoniae GA47794]
gi|395871801|gb|EJG82903.1| AAA domain family protein [Streptococcus pneumoniae GA52612]
gi|429316957|emb|CCP36686.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN034156]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|410477532|ref|YP_006744291.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae gamPNI0373]
gi|444386653|ref|ZP_21184680.1| ATPase family [Streptococcus pneumoniae PCS125219]
gi|444391106|ref|ZP_21189019.1| ATPase family [Streptococcus pneumoniae PCS70012]
gi|444393488|ref|ZP_21191134.1| ATPase family [Streptococcus pneumoniae PCS81218]
gi|444396370|ref|ZP_21193894.1| ATPase family [Streptococcus pneumoniae PNI0002]
gi|444398480|ref|ZP_21195962.1| ATPase family [Streptococcus pneumoniae PNI0006]
gi|444399614|ref|ZP_21197061.1| ATPase family [Streptococcus pneumoniae PNI0007]
gi|444402695|ref|ZP_21199850.1| ATPase family [Streptococcus pneumoniae PNI0008]
gi|444405756|ref|ZP_21202610.1| ATPase family [Streptococcus pneumoniae PNI0009]
gi|444408097|ref|ZP_21204764.1| ATPase family [Streptococcus pneumoniae PNI0010]
gi|444410598|ref|ZP_21207126.1| ATPase family [Streptococcus pneumoniae PNI0076]
gi|444412498|ref|ZP_21208819.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae PNI0153]
gi|444415474|ref|ZP_21211711.1| ATPase family [Streptococcus pneumoniae PNI0199]
gi|444418459|ref|ZP_21214438.1| ATPase family [Streptococcus pneumoniae PNI0360]
gi|444421115|ref|ZP_21216869.1| ATPase family [Streptococcus pneumoniae PNI0427]
gi|444422920|ref|ZP_21218556.1| ATPase family [Streptococcus pneumoniae PNI0446]
gi|406370477|gb|AFS44167.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae gamPNI0373]
gi|444254404|gb|ELU60837.1| ATPase family [Streptococcus pneumoniae PCS125219]
gi|444254806|gb|ELU61182.1| ATPase family [Streptococcus pneumoniae PNI0002]
gi|444255264|gb|ELU61620.1| ATPase family [Streptococcus pneumoniae PCS70012]
gi|444259209|gb|ELU65525.1| ATPase family [Streptococcus pneumoniae PNI0006]
gi|444259527|gb|ELU65840.1| ATPase family [Streptococcus pneumoniae PCS81218]
gi|444266016|gb|ELU71993.1| ATPase family [Streptococcus pneumoniae PNI0008]
gi|444268475|gb|ELU74329.1| ATPase family [Streptococcus pneumoniae PNI0007]
gi|444271693|gb|ELU77444.1| ATPase family [Streptococcus pneumoniae PNI0010]
gi|444272352|gb|ELU78071.1| ATPase family [Streptococcus pneumoniae PNI0009]
gi|444274460|gb|ELU80107.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
pneumoniae PNI0153]
gi|444277063|gb|ELU82587.1| ATPase family [Streptococcus pneumoniae PNI0076]
gi|444279857|gb|ELU85241.1| ATPase family [Streptococcus pneumoniae PNI0199]
gi|444281422|gb|ELU86740.1| ATPase family [Streptococcus pneumoniae PNI0360]
gi|444283212|gb|ELU88417.1| ATPase family [Streptococcus pneumoniae PNI0427]
gi|444287731|gb|ELU92644.1| ATPase family [Streptococcus pneumoniae PNI0446]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|419476591|ref|ZP_14016422.1| AAA domain family protein [Streptococcus pneumoniae GA14688]
gi|379557307|gb|EHZ22353.1| AAA domain family protein [Streptococcus pneumoniae GA14688]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|168484349|ref|ZP_02709301.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1873-00]
gi|168491727|ref|ZP_02715870.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC0288-04]
gi|225855688|ref|YP_002737200.1| chaperone ClpB 1 [Streptococcus pneumoniae JJA]
gi|225862011|ref|YP_002743520.1| chaperone ClpB 1 [Streptococcus pneumoniae Taiwan19F-14]
gi|298229669|ref|ZP_06963350.1| chaperone ClpB 1 [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298255666|ref|ZP_06979252.1| chaperone ClpB 1 [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298501710|ref|YP_003723650.1| ATP-binding Clp protease subunit [Streptococcus pneumoniae
TCH8431/19A]
gi|387789235|ref|YP_006254303.1| chaperone ClpB 1 [Streptococcus pneumoniae ST556]
gi|417313663|ref|ZP_12100372.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA04375]
gi|417697393|ref|ZP_12346568.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47368]
gi|418084021|ref|ZP_12721213.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44288]
gi|418086183|ref|ZP_12723358.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47281]
gi|418092818|ref|ZP_12729954.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44452]
gi|418095001|ref|ZP_12732124.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49138]
gi|418101678|ref|ZP_12738757.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 7286-06]
gi|418108864|ref|ZP_12745897.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41410]
gi|418111192|ref|ZP_12748207.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49447]
gi|418119692|ref|ZP_12756643.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA18523]
gi|418142741|ref|ZP_12779548.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13455]
gi|418151709|ref|ZP_12788451.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA14798]
gi|418153979|ref|ZP_12790713.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16121]
gi|418158568|ref|ZP_12795277.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16833]
gi|418163308|ref|ZP_12799986.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17328]
gi|418165520|ref|ZP_12802182.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17371]
gi|418168216|ref|ZP_12804862.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19077]
gi|418177016|ref|ZP_12813603.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41437]
gi|418219962|ref|ZP_12846623.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP127]
gi|418222255|ref|ZP_12848904.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47751]
gi|418224411|ref|ZP_12851046.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5185-06]
gi|418228695|ref|ZP_12855308.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 3063-00]
gi|418239748|ref|ZP_12866294.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NorthCarolina6A-23]
gi|419424061|ref|ZP_13964269.1| AAA domain family protein [Streptococcus pneumoniae GA43264]
gi|419426151|ref|ZP_13966342.1| AAA domain family protein [Streptococcus pneumoniae 7533-05]
gi|419428262|ref|ZP_13968439.1| AAA domain family protein [Streptococcus pneumoniae 5652-06]
gi|419437016|ref|ZP_13977097.1| AAA domain family protein [Streptococcus pneumoniae 8190-05]
gi|419439187|ref|ZP_13979250.1| AAA domain family protein [Streptococcus pneumoniae GA13499]
gi|419445722|ref|ZP_13985733.1| AAA domain family protein [Streptococcus pneumoniae GA19923]
gi|419447883|ref|ZP_13987884.1| AAA domain family protein [Streptococcus pneumoniae 7879-04]
gi|419449982|ref|ZP_13989975.1| AAA domain family protein [Streptococcus pneumoniae 4075-00]
gi|419461040|ref|ZP_14000962.1| AAA domain family protein [Streptococcus pneumoniae GA02270]
gi|419463359|ref|ZP_14003258.1| AAA domain family protein [Streptococcus pneumoniae GA02714]
gi|419490013|ref|ZP_14029758.1| AAA domain family protein [Streptococcus pneumoniae GA44386]
gi|419502861|ref|ZP_14042539.1| AAA domain family protein [Streptococcus pneumoniae GA47628]
gi|419526960|ref|ZP_14066511.1| AAA domain family protein [Streptococcus pneumoniae GA14373]
gi|419529168|ref|ZP_14068705.1| AAA domain family protein [Streptococcus pneumoniae GA17719]
gi|421212045|ref|ZP_15669022.1| clpC [Streptococcus pneumoniae 2070035]
gi|421232890|ref|ZP_15689526.1| clpC [Streptococcus pneumoniae 2080076]
gi|421271771|ref|ZP_15722618.1| AAA domain family protein [Streptococcus pneumoniae SPAR55]
gi|421288605|ref|ZP_15739363.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58771]
gi|172042451|gb|EDT50497.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC1873-00]
gi|183574069|gb|EDT94597.1| chaperone ClpB 1 [Streptococcus pneumoniae CDC0288-04]
gi|225723084|gb|ACO18937.1| chaperone ClpB 1 [Streptococcus pneumoniae JJA]
gi|225726430|gb|ACO22281.1| chaperone ClpB 1 [Streptococcus pneumoniae Taiwan19F-14]
gi|298237305|gb|ADI68436.1| ATP-binding Clp protease subunit [Streptococcus pneumoniae
TCH8431/19A]
gi|327388939|gb|EGE87287.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA04375]
gi|332198820|gb|EGJ12902.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47368]
gi|353753545|gb|EHD34168.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44288]
gi|353755023|gb|EHD35633.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47281]
gi|353761488|gb|EHD42055.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44452]
gi|353762538|gb|EHD43097.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49138]
gi|353768777|gb|EHD49300.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 7286-06]
gi|353775321|gb|EHD55802.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41410]
gi|353780303|gb|EHD60762.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA49447]
gi|353788805|gb|EHD69201.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA18523]
gi|353802442|gb|EHD82737.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13455]
gi|353812032|gb|EHD92268.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA14798]
gi|353815305|gb|EHD95525.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16121]
gi|353819750|gb|EHD99939.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16833]
gi|353825443|gb|EHE05608.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17328]
gi|353827300|gb|EHE07453.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17371]
gi|353836135|gb|EHE16223.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19077]
gi|353838975|gb|EHE19051.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41437]
gi|353872028|gb|EHE51897.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP127]
gi|353872650|gb|EHE52514.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47751]
gi|353876943|gb|EHE56788.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 5185-06]
gi|353879004|gb|EHE58832.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae 3063-00]
gi|353890783|gb|EHE70543.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NorthCarolina6A-23]
gi|379138977|gb|AFC95768.1| chaperone ClpB 1 [Streptococcus pneumoniae ST556]
gi|379528913|gb|EHY94166.1| AAA domain family protein [Streptococcus pneumoniae GA02270]
gi|379529082|gb|EHY94334.1| AAA domain family protein [Streptococcus pneumoniae GA02714]
gi|379535532|gb|EHZ00733.1| AAA domain family protein [Streptococcus pneumoniae GA13499]
gi|379555566|gb|EHZ20633.1| AAA domain family protein [Streptococcus pneumoniae GA14373]
gi|379562812|gb|EHZ27821.1| AAA domain family protein [Streptococcus pneumoniae GA17719]
gi|379569542|gb|EHZ34512.1| AAA domain family protein [Streptococcus pneumoniae GA19923]
gi|379584483|gb|EHZ49351.1| AAA domain family protein [Streptococcus pneumoniae GA43264]
gi|379584999|gb|EHZ49862.1| AAA domain family protein [Streptococcus pneumoniae GA44386]
gi|379598076|gb|EHZ62871.1| AAA domain family protein [Streptococcus pneumoniae GA47628]
gi|379611303|gb|EHZ76030.1| AAA domain family protein [Streptococcus pneumoniae 8190-05]
gi|379611623|gb|EHZ76346.1| AAA domain family protein [Streptococcus pneumoniae 7879-04]
gi|379616138|gb|EHZ80838.1| AAA domain family protein [Streptococcus pneumoniae 5652-06]
gi|379616557|gb|EHZ81252.1| AAA domain family protein [Streptococcus pneumoniae 7533-05]
gi|379620926|gb|EHZ85576.1| AAA domain family protein [Streptococcus pneumoniae 4075-00]
gi|395571524|gb|EJG32143.1| clpC [Streptococcus pneumoniae 2070035]
gi|395593125|gb|EJG53377.1| clpC [Streptococcus pneumoniae 2080076]
gi|395877330|gb|EJG88399.1| AAA domain family protein [Streptococcus pneumoniae SPAR55]
gi|395885237|gb|EJG96264.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58771]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|418976927|ref|ZP_13524766.1| Clp amino terminal domain protein [Streptococcus mitis SK575]
gi|383350654|gb|EID28517.1| Clp amino terminal domain protein [Streptococcus mitis SK575]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|418077429|ref|ZP_12714658.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47502]
gi|419483214|ref|ZP_14022997.1| AAA domain family protein [Streptococcus pneumoniae GA40563]
gi|353745603|gb|EHD26272.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47502]
gi|379577746|gb|EHZ42664.1| AAA domain family protein [Streptococcus pneumoniae GA40563]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|348174862|ref|ZP_08881756.1| Clp protease ATP binding subunit [Saccharopolyspora spinosa NRRL
18395]
Length = 843
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 94/178 (52%), Gaps = 19/178 (10%)
Query: 683 YKTLRI--ALAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKV 737
++ LR+ AL E+V QDEA+ +++AV R R G R +GS FLGP V
Sbjct: 523 HRLLRLEEALHERVVGQDEAVLAVAEAVRRNRAGMAHPDRPIGS-------FLFLGPTGV 575
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIY 797
GK ++ ALAE++FG++ KLI D+S Q + + + + G+ +
Sbjct: 576 GKTELGKALAELMFGDEHKLIRFDMSEFQEKHTVSRLVGAPP-GYVGYEEAGQ-----LT 629
Query: 798 QEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++ R +PYSV+ ++++KA + ++L + + G+ TD+ GR V + + TS I
Sbjct: 630 EKVRRQPYSVLLFDEIEKAHRDVF-NTLLQVLDDGRLTDAQGRTVDFRNTVVIMTSNI 686
>gi|421209901|ref|ZP_15666910.1| clpC [Streptococcus pneumoniae 2070005]
gi|395572071|gb|EJG32672.1| clpC [Streptococcus pneumoniae 2070005]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|385261591|ref|ZP_10039711.1| Clp amino terminal domain protein [Streptococcus sp. SK643]
gi|385192794|gb|EIF40189.1| Clp amino terminal domain protein [Streptococcus sp. SK643]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|419535697|ref|ZP_14075191.1| AAA domain family protein [Streptococcus pneumoniae GA17457]
gi|379561837|gb|EHZ26852.1| AAA domain family protein [Streptococcus pneumoniae GA17457]
Length = 795
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 484 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 536
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 537 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 583
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 584 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 642
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 643 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 672
>gi|417687654|ref|ZP_12336921.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41301]
gi|418160938|ref|ZP_12797634.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17227]
gi|419522151|ref|ZP_14061742.1| AAA domain family protein [Streptococcus pneumoniae GA05245]
gi|421237290|ref|ZP_15693881.1| clpC [Streptococcus pneumoniae 2071004]
gi|332071464|gb|EGI81958.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41301]
gi|353820203|gb|EHE00391.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17227]
gi|379536138|gb|EHZ01329.1| AAA domain family protein [Streptococcus pneumoniae GA05245]
gi|395599867|gb|EJG60028.1| clpC [Streptococcus pneumoniae 2071004]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|307068805|ref|YP_003877771.1| ATPase [Streptococcus pneumoniae AP200]
gi|417699571|ref|ZP_12348739.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41317]
gi|418103933|ref|ZP_12741001.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP070]
gi|418126846|ref|ZP_12763748.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44511]
gi|418149532|ref|ZP_12786291.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13856]
gi|418167857|ref|ZP_12804507.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17971]
gi|418192642|ref|ZP_12829141.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47388]
gi|418215401|ref|ZP_12842132.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA54644]
gi|419454288|ref|ZP_13994255.1| AAA domain family protein [Streptococcus pneumoniae EU-NP03]
gi|419472072|ref|ZP_14011928.1| AAA domain family protein [Streptococcus pneumoniae GA07914]
gi|419485415|ref|ZP_14025186.1| AAA domain family protein [Streptococcus pneumoniae GA43257]
gi|419487741|ref|ZP_14027500.1| AAA domain family protein [Streptococcus pneumoniae GA44128]
gi|419494317|ref|ZP_14034039.1| AAA domain family protein [Streptococcus pneumoniae GA47210]
gi|419504919|ref|ZP_14044582.1| AAA domain family protein [Streptococcus pneumoniae GA47760]
gi|419507059|ref|ZP_14046717.1| AAA domain family protein [Streptococcus pneumoniae GA49194]
gi|421207704|ref|ZP_15664747.1| clpC [Streptococcus pneumoniae 2090008]
gi|421230746|ref|ZP_15687404.1| clpC [Streptococcus pneumoniae 2061376]
gi|421239519|ref|ZP_15696080.1| clpC [Streptococcus pneumoniae 2071247]
gi|421241666|ref|ZP_15698207.1| clpC [Streptococcus pneumoniae 2080913]
gi|421246020|ref|ZP_15702515.1| clpC [Streptococcus pneumoniae 2081685]
gi|421250464|ref|ZP_15706914.1| clpC [Streptococcus pneumoniae 2082239]
gi|421293004|ref|ZP_15743735.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56348]
gi|421300205|ref|ZP_15750876.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA19998]
gi|421315048|ref|ZP_15765632.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA47562]
gi|306410342|gb|ADM85769.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
pneumoniae AP200]
gi|332198608|gb|EGJ12691.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41317]
gi|353773496|gb|EHD53993.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP070]
gi|353794382|gb|EHD74739.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44511]
gi|353810334|gb|EHD90586.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13856]
gi|353827601|gb|EHE07752.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17971]
gi|353854476|gb|EHE34454.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47388]
gi|353867691|gb|EHE47582.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA54644]
gi|379543461|gb|EHZ08611.1| AAA domain family protein [Streptococcus pneumoniae GA07914]
gi|379580188|gb|EHZ45083.1| AAA domain family protein [Streptococcus pneumoniae GA43257]
gi|379584633|gb|EHZ49499.1| AAA domain family protein [Streptococcus pneumoniae GA44128]
gi|379591579|gb|EHZ56403.1| AAA domain family protein [Streptococcus pneumoniae GA47210]
gi|379604105|gb|EHZ68867.1| AAA domain family protein [Streptococcus pneumoniae GA47760]
gi|379604506|gb|EHZ69265.1| AAA domain family protein [Streptococcus pneumoniae GA49194]
gi|379622426|gb|EHZ87061.1| AAA domain family protein [Streptococcus pneumoniae EU-NP03]
gi|395571807|gb|EJG32411.1| clpC [Streptococcus pneumoniae 2090008]
gi|395592548|gb|EJG52813.1| clpC [Streptococcus pneumoniae 2061376]
gi|395599653|gb|EJG59818.1| clpC [Streptococcus pneumoniae 2071247]
gi|395605942|gb|EJG66053.1| clpC [Streptococcus pneumoniae 2080913]
gi|395606134|gb|EJG66243.1| clpC [Streptococcus pneumoniae 2081685]
gi|395612041|gb|EJG72087.1| clpC [Streptococcus pneumoniae 2082239]
gi|395891252|gb|EJH02254.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56348]
gi|395899629|gb|EJH10568.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA19998]
gi|395911632|gb|EJH22497.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA47562]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|168489268|ref|ZP_02713467.1| ClpB protein [Streptococcus pneumoniae SP195]
gi|221232896|ref|YP_002512050.1| stress response-related Clp ATPase [Streptococcus pneumoniae ATCC
700669]
gi|415701482|ref|ZP_11458391.1| clpC [Streptococcus pneumoniae 459-5]
gi|417680172|ref|ZP_12329565.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17570]
gi|418124567|ref|ZP_12761494.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44378]
gi|418129107|ref|ZP_12765996.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP170]
gi|418138308|ref|ZP_12775142.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11663]
gi|418179340|ref|ZP_12815917.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41565]
gi|418235382|ref|ZP_12861955.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA08780]
gi|419474282|ref|ZP_14014127.1| AAA domain family protein [Streptococcus pneumoniae GA13430]
gi|421279960|ref|ZP_15730763.1| AAA domain family protein [Streptococcus pneumoniae GA17301]
gi|421295104|ref|ZP_15745822.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56113]
gi|183572254|gb|EDT92782.1| ClpB protein [Streptococcus pneumoniae SP195]
gi|220675358|emb|CAR69957.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae ATCC 700669]
gi|332071637|gb|EGI82130.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17570]
gi|353794179|gb|EHD74537.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA44378]
gi|353797157|gb|EHD77494.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP170]
gi|353840854|gb|EHE20916.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41565]
gi|353885105|gb|EHE64895.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA08780]
gi|353899665|gb|EHE75234.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11663]
gi|379549351|gb|EHZ14461.1| AAA domain family protein [Streptococcus pneumoniae GA13430]
gi|381312670|gb|EIC53465.1| clpC [Streptococcus pneumoniae 459-5]
gi|395877188|gb|EJG88258.1| AAA domain family protein [Streptococcus pneumoniae GA17301]
gi|395891461|gb|EJH02456.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA56113]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|421312955|ref|ZP_15763552.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58981]
gi|395907707|gb|EJH18597.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58981]
Length = 795
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 484 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 536
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 537 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 583
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 584 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 642
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 643 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 672
>gi|405761809|ref|YP_006702405.1| stress response-related Clp ATPase [Streptococcus pneumoniae
SPNA45]
gi|404278698|emb|CCM09331.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPNA45]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|421235043|ref|ZP_15691657.1| clpC [Streptococcus pneumoniae 2061617]
gi|395599201|gb|EJG59381.1| clpC [Streptococcus pneumoniae 2061617]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|418147450|ref|ZP_12784222.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13637]
gi|418190429|ref|ZP_12826938.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47373]
gi|353810530|gb|EHD90781.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13637]
gi|353851688|gb|EHE31679.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47373]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|418097329|ref|ZP_12734434.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16531]
gi|353765952|gb|EHD46493.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16531]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|116516069|ref|YP_817407.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae D39]
gi|116076645|gb|ABJ54365.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae D39]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|225857764|ref|YP_002739275.1| chaperone ClpB 1 [Streptococcus pneumoniae P1031]
gi|225726282|gb|ACO22134.1| chaperone ClpB 1 [Streptococcus pneumoniae P1031]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|182685132|ref|YP_001836879.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae CGSP14]
gi|303254856|ref|ZP_07340941.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS455]
gi|303259682|ref|ZP_07345658.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP-BS293]
gi|303262149|ref|ZP_07348094.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS292]
gi|303264584|ref|ZP_07350503.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS397]
gi|303266107|ref|ZP_07352001.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS457]
gi|303269948|ref|ZP_07355685.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS458]
gi|387760270|ref|YP_006067248.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV200]
gi|418140535|ref|ZP_12777356.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13338]
gi|418181561|ref|ZP_12818126.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41688]
gi|419515691|ref|ZP_14055313.1| AAA domain family protein [Streptococcus pneumoniae England14-9]
gi|421269378|ref|ZP_15720240.1| AAA domain family protein [Streptococcus pneumoniae SPAR95]
gi|421296966|ref|ZP_15747669.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58581]
gi|182630466|gb|ACB91414.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae CGSP14]
gi|301802859|emb|CBW35637.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae INV200]
gi|302598127|gb|EFL65188.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS455]
gi|302636789|gb|EFL67279.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP14-BS292]
gi|302639234|gb|EFL69693.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP-BS293]
gi|302640513|gb|EFL70923.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS458]
gi|302644411|gb|EFL74664.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS457]
gi|302645954|gb|EFL76182.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae BS397]
gi|353841277|gb|EHE21334.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41688]
gi|353904381|gb|EHE79858.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA13338]
gi|379634007|gb|EHZ98573.1| AAA domain family protein [Streptococcus pneumoniae England14-9]
gi|395866297|gb|EJG77428.1| AAA domain family protein [Streptococcus pneumoniae SPAR95]
gi|395892540|gb|EJH03530.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA58581]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|168576066|ref|ZP_02721971.1| chaperone ClpB 1 [Streptococcus pneumoniae MLV-016]
gi|307128461|ref|YP_003880492.1| chaperone ClpB 1 [Streptococcus pneumoniae 670-6B]
gi|418075045|ref|ZP_12712291.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11184]
gi|418087821|ref|ZP_12724986.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47033]
gi|418133653|ref|ZP_12770519.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11304]
gi|418183745|ref|ZP_12820299.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43380]
gi|418217654|ref|ZP_12844329.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae Netherlands15B-37]
gi|419432590|ref|ZP_13972715.1| AAA domain family protein [Streptococcus pneumoniae EU-NP05]
gi|419469997|ref|ZP_14009861.1| AAA domain family protein [Streptococcus pneumoniae GA06083]
gi|419496392|ref|ZP_14036106.1| AAA domain family protein [Streptococcus pneumoniae GA47461]
gi|419498572|ref|ZP_14038274.1| AAA domain family protein [Streptococcus pneumoniae GA47522]
gi|421303890|ref|ZP_15754551.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA17484]
gi|421308397|ref|ZP_15759035.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60132]
gi|183578054|gb|EDT98582.1| chaperone ClpB 1 [Streptococcus pneumoniae MLV-016]
gi|306485523|gb|ADM92392.1| chaperone ClpB 1 [Streptococcus pneumoniae 670-6B]
gi|353745219|gb|EHD25890.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11184]
gi|353755498|gb|EHD36101.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47033]
gi|353803889|gb|EHD84179.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA11304]
gi|353846763|gb|EHE26791.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA43380]
gi|353868467|gb|EHE48354.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae Netherlands15B-37]
gi|379542707|gb|EHZ07862.1| AAA domain family protein [Streptococcus pneumoniae GA06083]
gi|379591892|gb|EHZ56712.1| AAA domain family protein [Streptococcus pneumoniae GA47461]
gi|379597636|gb|EHZ62434.1| AAA domain family protein [Streptococcus pneumoniae GA47522]
gi|379626623|gb|EHZ91240.1| AAA domain family protein [Streptococcus pneumoniae EU-NP05]
gi|395898307|gb|EJH09252.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA17484]
gi|395905200|gb|EJH16106.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA60132]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|318059835|ref|ZP_07978558.1| chaperone [Streptomyces sp. SA3_actG]
Length = 845
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKI 742
L AL +V Q+EA+ ++QAV R R G G R VGS FLGP VGK ++
Sbjct: 536 LEEALHSRVVGQEEAVTAVAQAVRRNRAGMGDPDRPVGS-------FLFLGPTGVGKTEL 588
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A ALAE++FG++ +++ D+S Q + + + + G+ + ++ R
Sbjct: 589 AKALAELLFGDENRMVRFDMSEFQEKHTVSRLVGAPP-GYVGHEEAGQ-----LTEKVRR 642
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSV+ ++++K A P V ++L + + G+ TD+ GR V + + TS I
Sbjct: 643 SPYSVLLFDEVEK-AHPDVFNTLLQVLDDGRLTDAQGRTVDFRHTVVIMTSNI 694
>gi|418199056|ref|ZP_12835508.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47778]
gi|419452127|ref|ZP_13992107.1| AAA domain family protein [Streptococcus pneumoniae EU-NP02]
gi|419519921|ref|ZP_14059524.1| AAA domain family protein [Streptococcus pneumoniae GA08825]
gi|353859471|gb|EHE39422.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA47778]
gi|379621346|gb|EHZ85994.1| AAA domain family protein [Streptococcus pneumoniae EU-NP02]
gi|379638075|gb|EIA02621.1| AAA domain family protein [Streptococcus pneumoniae GA08825]
Length = 795
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 484 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 536
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 537 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 583
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 584 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 642
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 643 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 672
>gi|149012833|ref|ZP_01833778.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP19-BS75]
gi|147763264|gb|EDK70203.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP19-BS75]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|421310600|ref|ZP_15761222.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62681]
gi|395908215|gb|EJH19098.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA62681]
Length = 795
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 484 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 536
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 537 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 583
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 584 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 642
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 643 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 672
>gi|422012810|ref|ZP_16359452.1| Clp amino terminal domain protein [Actinomyces georgiae F0490]
gi|394752669|gb|EJF36341.1| Clp amino terminal domain protein [Actinomyces georgiae F0490]
Length = 822
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 29/225 (12%)
Query: 640 KEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPF----DPRDYKTLRIA--LAEK 693
KE + G E D ++E T H + + + S TG P K LR+ L ++
Sbjct: 467 KEAAWKG---GESDEIAEVTDHEIAEVLAMS---TGIPVVRLTQTETSKLLRMEDELHKR 520
Query: 694 VGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGN 753
V QDEA+ +SQ++ R R G + ++ G F GP VGK ++A ALAE +FG+
Sbjct: 521 VIGQDEAVKALSQSIRRTRSG----LKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGD 576
Query: 754 KGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFL 810
+ LI +D+S + +F G V D + ++ R KP+SVV
Sbjct: 577 EDALIQLDMSEFSEKHTASRLFGAPP---------GYVGYDEGGQLTEKVRRKPFSVVLF 627
Query: 811 EDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P + +SL + + G+ TDS GR V + + T+ +
Sbjct: 628 DEVEK-AHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNL 671
>gi|154151146|ref|YP_001404764.1| ATPase [Methanoregula boonei 6A8]
gi|153999698|gb|ABS56121.1| ATPase AAA-2 domain protein [Methanoregula boonei 6A8]
Length = 863
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 19/182 (10%)
Query: 685 TLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKK 741
+L L ++V QDEAI +S A+ R R G R +GS FLG VGK +
Sbjct: 559 SLEAELHKRVVGQDEAIAAVSNAIRRSRAGLQDTKRPIGS-------FIFLGTTGVGKTE 611
Query: 742 IASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFR 801
+A ALAE +F N+ ++ +D+S Q + + + + G+ + + R
Sbjct: 612 LAKALAEFLFNNENSMVRIDMSEYQERHTVSRLIGAPP-GYVGYEESGQ-----LTEAVR 665
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHS 861
KPYSVV L++++K A P V + L + + G+ TD+ GR V I + TS I G H
Sbjct: 666 RKPYSVVLLDEIEK-AHPDVFNILLQVLDDGRLTDNKGRTVDFKNTIIIMTSNI--GSHL 722
Query: 862 VH 863
+
Sbjct: 723 IQ 724
>gi|148998004|ref|ZP_01825517.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP11-BS70]
gi|147756014|gb|EDK63057.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP11-BS70]
Length = 726
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|331267290|ref|YP_004326920.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
oralis Uo5]
gi|326683962|emb|CBZ01580.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
oralis Uo5]
Length = 810
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDY 795
VGK ++A ALAE++F ++ LI D +S+ F ++ G
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFD------MSEYMEKFAANRLNGAPPGYVGYEEGGE 605
Query: 796 IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS-- 853
+ ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I + TS
Sbjct: 606 LTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNL 664
Query: 854 --TILKGKHSVHPQTTPVKFSEE 874
T L+ +V ++F +E
Sbjct: 665 GATALRDDKTVGFGAKDIRFDQE 687
>gi|418975472|ref|ZP_13523376.1| Clp amino terminal domain protein [Streptococcus oralis SK1074]
gi|383347455|gb|EID25433.1| Clp amino terminal domain protein [Streptococcus oralis SK1074]
Length = 810
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|418196866|ref|ZP_12833336.1| ATPase associated with various cellular activities family protein,
partial [Streptococcus pneumoniae GA47688]
gi|353858026|gb|EHE37987.1| ATPase associated with various cellular activities family protein,
partial [Streptococcus pneumoniae GA47688]
Length = 327
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 57 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 109
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 110 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 156
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 157 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 215
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 216 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 245
>gi|134099924|ref|YP_001105585.1| Clp protease ATP binding subunit [Saccharopolyspora erythraea NRRL
2338]
gi|291008683|ref|ZP_06566656.1| Clp protease ATP binding subunit [Saccharopolyspora erythraea NRRL
2338]
gi|133912547|emb|CAM02660.1| clp protease ATP binding subunit [Saccharopolyspora erythraea NRRL
2338]
Length = 838
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 17/191 (8%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIA 743
+ L L +V QD+A+ +++AV R R G G +N G +L FLGP VGK ++A
Sbjct: 525 RNLEGELHRRVIGQDDAVRALARAVRRSRSGVG---NANRPVGSFL-FLGPTGVGKTELA 580
Query: 744 SALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFR 801
ALAE +FG++ ++I +D+S Q + + + + + + R
Sbjct: 581 KALAETLFGDEDRMIRLDMSEFQERHNAARLIGAPPGYVGYGEAG--------ELTEAVR 632
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHS 861
+PYSVV L++++K A P V ++L + + G+ TD GR V + + + TS + G
Sbjct: 633 RRPYSVVLLDEVEK-AHPDVFNTLLQVLEDGRLTDGQGRTVDFTNTVVIMTSNL--GSEV 689
Query: 862 VHPQTTPVKFS 872
+ ++ + FS
Sbjct: 690 ISSKSGGLGFS 700
>gi|333023515|ref|ZP_08451579.1| putative chaperone [Streptomyces sp. Tu6071]
gi|332743367|gb|EGJ73808.1| putative chaperone [Streptomyces sp. Tu6071]
Length = 875
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKI 742
L AL +V Q+EA+ ++QAV R R G G R VGS FLGP VGK ++
Sbjct: 566 LEEALHSRVVGQEEAVTAVAQAVRRNRAGMGDPDRPVGS-------FLFLGPTGVGKTEL 618
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A ALAE++FG++ +++ D+S Q + + + + G+ + ++ R
Sbjct: 619 AKALAELLFGDENRMVRFDMSEFQEKHTVSRLVGAPP-GYVGHEEAGQ-----LTEKVRR 672
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSV+ ++++K A P V ++L + + G+ TD+ GR V + + TS I
Sbjct: 673 SPYSVLLFDEVEK-AHPDVFNTLLQVLDDGRLTDAQGRTVDFRHTVVIMTSNI 724
>gi|421299648|ref|ZP_15750329.1| ATP-dependent Clp proteinase, ATP-binding chain, partial
[Streptococcus pneumoniae GA60080]
gi|395898028|gb|EJH08977.1| ATP-dependent Clp proteinase, ATP-binding chain, partial
[Streptococcus pneumoniae GA60080]
Length = 685
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 374 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 426
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 427 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 473
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 474 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 532
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 533 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 562
>gi|417847729|ref|ZP_12493691.1| chaperone protein ClpB [Streptococcus mitis SK1073]
gi|339456563|gb|EGP69154.1| chaperone protein ClpB [Streptococcus mitis SK1073]
Length = 810
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DVKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|413961747|ref|ZP_11400975.1| ATPase [Burkholderia sp. SJ98]
gi|413930619|gb|EKS69906.1| ATPase [Burkholderia sp. SJ98]
Length = 911
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 33/215 (15%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q EA+ +S AV R R G G N ++L FLGP VGK ++A ALAE+
Sbjct: 592 LHKRVIGQQEAVVAVSDAVRRARTGLQ---GRNRPIAVFL-FLGPTGVGKTELAKALAEV 647
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
VFG + ++ VD+S + + G V D + + R +PYS
Sbjct: 648 VFGEEDAMLRVDMS---------EYMERHAVSRLIGSPPGYVGYDEGGQLTERVRRRPYS 698
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
V+ L++++K A P V + L + G+ TD GR V S + +ATS +
Sbjct: 699 VILLDEIEK-AHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTLIIATSNL----------- 746
Query: 867 TPVKFSEEIILGAKRWQMQTAISHGFADAARGSGM 901
++I G KR + + ADA+ +G+
Sbjct: 747 -----GSDVIAGQKRATLGFTTNASDADASVQNGV 776
>gi|342164860|ref|YP_004769499.1| ATPase [Streptococcus pseudopneumoniae IS7493]
gi|341934742|gb|AEL11639.1| ATPase [Streptococcus pseudopneumoniae IS7493]
Length = 810
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ ++S+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSVSRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|357637096|ref|ZP_09134971.1| Clp amino terminal domain protein [Streptococcus macacae NCTC
11558]
gi|357585550|gb|EHJ52753.1| Clp amino terminal domain protein [Streptococcus macacae NCTC
11558]
Length = 813
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D R Y L L ++V QDEA+ ++S+A+ R + G R +GS FLGP
Sbjct: 502 DSRKYLNLEKELHKRVIGQDEAVSSVSRAIRRNQSGIRTGRRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAEI+F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAEILFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPY+V+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 602 GYEEGGELTEKVRNKPYAVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|148984497|ref|ZP_01817785.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP3-BS71]
gi|387758341|ref|YP_006065320.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae OXC141]
gi|418233175|ref|ZP_12859758.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07228]
gi|418236302|ref|ZP_12862870.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19690]
gi|147923274|gb|EDK74388.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP3-BS71]
gi|301800930|emb|CBW33589.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae OXC141]
gi|353884753|gb|EHE64548.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA07228]
gi|353892534|gb|EHE72282.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA19690]
gi|429320308|emb|CCP33650.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN034183]
gi|429322128|emb|CCP35624.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN994039]
gi|429323948|emb|CCP31665.1| putative stress response-related Clp ATPase [Streptococcus
pneumoniae SPN994038]
Length = 810
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F + LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDEESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|307710307|ref|ZP_07646748.1| clpC [Streptococcus mitis SK564]
gi|307618899|gb|EFN98034.1| clpC [Streptococcus mitis SK564]
Length = 810
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ ++S+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSVSRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|379708456|ref|YP_005263661.1| ATP-dependent Clp protease ATP-binding subunit clpC [Nocardia
cyriacigeorgica GUH-2]
gi|374845955|emb|CCF63025.1| ATP-dependent Clp protease ATP-binding subunit clpC [Nocardia
cyriacigeorgica GUH-2]
Length = 819
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 21/171 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEAI +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 516 LHKRVIGQDEAIVAVAEAVRRARAGLKDPNRPIGS-------FLFLGPTGVGKTELAKAL 568
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKP 804
AE VFG++ +LI D+S Q + + + + D + + R +P
Sbjct: 569 AEAVFGDEDRLIRFDMSEFQEKHTVSRLVGAPPGYVGYDDAA--------QLTDKVRRQP 620
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
YSV+ ++++K A P V + L + + G+ TDS GR V I + TS I
Sbjct: 621 YSVILFDEIEK-AHPDVFNVLLQLLDDGRVTDSKGRTVDFKNTIVIMTSNI 670
>gi|383765463|ref|YP_005444444.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Phycisphaera
mikurensis NBRC 102666]
gi|381385731|dbj|BAM02547.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Phycisphaera
mikurensis NBRC 102666]
Length = 877
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 23/172 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L + V QDEAI T+S+A+ R R G R +GS F+GP VGK ++ AL
Sbjct: 528 LHKTVVSQDEAIKTVSRAIRRARSGLKDPRRPMGS-------FIFIGPSGVGKTLLSKAL 580
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE +FG+ LI +D+S + N+ G V + + ++ R +
Sbjct: 581 AEFMFGDADALIRIDMS---------EYMEKHNVSRLIGAPPGYVGYEEGGQLTEQIRRR 631
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PY+VV L++++K A P V ++L + + G+ TDS+GR V +I + TS I
Sbjct: 632 PYAVVLLDEIEK-AHPDVFNTLLQVMEEGQLTDSFGRHVDFRNVILIMTSNI 682
>gi|383937727|ref|ZP_09990969.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
SK674]
gi|418973172|ref|ZP_13521195.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383350169|gb|EID28063.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383715378|gb|EID71342.1| Clp amino terminal domain protein [Streptococcus pseudopneumoniae
SK674]
Length = 810
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ ++S+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSVSRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|392374710|ref|YP_003206543.1| chaperone [Candidatus Methylomirabilis oxyfera]
gi|258592403|emb|CBE68712.1| Chaperone [Candidatus Methylomirabilis oxyfera]
Length = 810
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 21/192 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q EAI ++S+A+ R R G R VGS FLGP VGK ++A AL
Sbjct: 502 LTKRVVGQIEAIESVSRAIRRSRAGIKSPSRPVGS-------FIFLGPTGVGKTELAKAL 554
Query: 747 AEIVFGNKGKLIHVDVSS-EQRVSQPNSIFDCQN-IDFCDCKLRGKVLVDYIYQEFRSKP 804
AE +FG + LI VD+S +R S I I + D + ++ R +P
Sbjct: 555 AEFLFGTEDALIRVDMSEYMERFSTSRLIGAPPGYIGYDDS--------GQLTEKVRRRP 606
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHP 864
+SV+ L++++K A P V + L + G+ TDSYGR V I + TS I + +H
Sbjct: 607 FSVILLDEIEK-AHPEVFNLLLQIFEDGRLTDSYGRIVDFKNTILIMTSNIGARQIGLHT 665
Query: 865 QTTPVKFSEEII 876
K +E +
Sbjct: 666 AMGFAKGGDEAV 677
>gi|423314674|ref|ZP_17292607.1| hypothetical protein HMPREF1058_03219 [Bacteroides vulgatus
CL09T03C04]
gi|392682003|gb|EIY75358.1| hypothetical protein HMPREF1058_03219 [Bacteroides vulgatus
CL09T03C04]
Length = 838
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 25/173 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD+AI T+ +A+ R R+G +D N G ++ FLGP VGK +A LA++
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVG-LKD--PNKPIGTFM-FLGPTGVGKTHLAKELAKL 589
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 590 MFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 636
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYS+V L++++K A P V + L + + G+ TDSYGR V I + TS I
Sbjct: 637 KPYSIVLLDEIEK-AHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIIIMTSNI 688
>gi|381209029|ref|ZP_09916100.1| ATP-dependent Clp proteinase [Lentibacillus sp. Grbi]
Length = 709
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L EKV QDEA+ +++AV R R G R +GS F+GP VGK ++ AL
Sbjct: 418 LGEKVIGQDEAVQKVAKAVRRSRAGLKSKYRPIGS-------FLFVGPTGVGKTELTKAL 470
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ LI +D+S + I G + ++ R PYS
Sbjct: 471 AEELFGSRDSLIRLDMSEYMEKHATSKIIGSP------PGYVGHEEAGQLTEKVRRNPYS 524
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVH 863
++ L++++KA P VQ+ + + G+ TDS+GR VS + + TS G+ ++
Sbjct: 525 ILLLDEIEKAH-PDVQNMFLQIMEDGQLTDSHGRTVSFKDTVIIMTSNAGTGEKQIN 580
>gi|302867374|ref|YP_003836011.1| ATPase AAA-2 domain-containing protein [Micromonospora aurantiaca
ATCC 27029]
gi|302570233|gb|ADL46435.1| ATPase AAA-2 domain protein [Micromonospora aurantiaca ATCC 27029]
Length = 849
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 20/197 (10%)
Query: 664 VQSSSCSAPHTGEPFDPRDYKTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNG---RD 718
V S + P T + RD + LR+ L EK+ QD+A+ +++AV R R G R
Sbjct: 505 VVSRATGIPVTQLTEEERD-RLLRLEGHLHEKIIGQDDAVSAVAEAVRRSRTGLADPDRP 563
Query: 719 VGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQ 778
+GS FLGP VGK ++A ALAE +FG +++ VD+S Q + +
Sbjct: 564 MGS-------FLFLGPTGVGKTELARALAEALFGEADRMVRVDMSEFQERHTVSRLVGAP 616
Query: 779 NIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSY 838
+ + G+ + + R +PY+VV L++++K A P V + L + + G+ TDS
Sbjct: 617 P-GYVGYEEAGQ-----LTEAVRRRPYAVVLLDEIEK-AHPDVFNILLQVLDDGRLTDSQ 669
Query: 839 GRDVSISGMIFVATSTI 855
GR V+ + + TS +
Sbjct: 670 GRTVNFKNTVLIMTSNL 686
>gi|423231490|ref|ZP_17217893.1| hypothetical protein HMPREF1063_03713 [Bacteroides dorei
CL02T00C15]
gi|423246077|ref|ZP_17227150.1| hypothetical protein HMPREF1064_03356 [Bacteroides dorei
CL02T12C06]
gi|392627120|gb|EIY21159.1| hypothetical protein HMPREF1063_03713 [Bacteroides dorei
CL02T00C15]
gi|392637062|gb|EIY30938.1| hypothetical protein HMPREF1064_03356 [Bacteroides dorei
CL02T12C06]
Length = 838
Score = 80.9 bits (198), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 25/173 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD+AI T+ +A+ R R+G +D N G ++ FLGP VGK +A LA++
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVG-LKD--PNKPIGTFM-FLGPTGVGKTHLAKELAKL 589
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 590 MFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 636
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYS+V L++++K A P V + L + + G+ TDSYGR V I + TS I
Sbjct: 637 KPYSIVLLDEIEK-AHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|212693187|ref|ZP_03301315.1| hypothetical protein BACDOR_02697 [Bacteroides dorei DSM 17855]
gi|212664292|gb|EEB24864.1| ATPase family associated with various cellular activities (AAA)
[Bacteroides dorei DSM 17855]
Length = 838
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 25/173 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD+AI T+ +A+ R R+G +D N G ++ FLGP VGK +A LA++
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVG-LKD--PNKPIGTFM-FLGPTGVGKTHLAKELAKL 589
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 590 MFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 636
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYS+V L++++K A P V + L + + G+ TDSYGR V I + TS I
Sbjct: 637 KPYSIVLLDEIEK-AHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|443291207|ref|ZP_21030301.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Micromonospora lupini str. Lupac 08]
gi|385885609|emb|CCH18408.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Micromonospora lupini str. Lupac 08]
Length = 851
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L EKV QD+A+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 533 LHEKVVGQDDAVTAVAEAVRRSRAGLADPERPMGS-------FLFLGPTGVGKTELARAL 585
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG +++ VD+S Q + + + + G+ + + R +PY+
Sbjct: 586 AEALFGEADRMVRVDMSEFQERHTVSRLVGAPP-GYVGYEEAGQ-----LTEAVRRRPYA 639
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V+ + + TS +
Sbjct: 640 VVLLDEIEK-AHPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSNL 687
>gi|237709929|ref|ZP_04540410.1| ATP-dependent Clp protease [Bacteroides sp. 9_1_42FAA]
gi|423238391|ref|ZP_17219507.1| hypothetical protein HMPREF1065_00130 [Bacteroides dorei
CL03T12C01]
gi|229456022|gb|EEO61743.1| ATP-dependent Clp protease [Bacteroides sp. 9_1_42FAA]
gi|392648074|gb|EIY41764.1| hypothetical protein HMPREF1065_00130 [Bacteroides dorei
CL03T12C01]
Length = 838
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 25/173 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD+AI T+ +A+ R R+G +D N G ++ FLGP VGK +A LA++
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVG-LKD--PNKPIGTFM-FLGPTGVGKTHLAKELAKL 589
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 590 MFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 636
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYS+V L++++K A P V + L + + G+ TDSYGR V I + TS I
Sbjct: 637 KPYSIVLLDEIEK-AHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|383780572|ref|YP_005465138.1| putative ATPase associated with various cellular activities
[Actinoplanes missouriensis 431]
gi|381373804|dbj|BAL90622.1| putative ATPase associated with various cellular activities
[Actinoplanes missouriensis 431]
Length = 867
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 114/243 (46%), Gaps = 32/243 (13%)
Query: 640 KEQCFSGSISAEFDAVSEGTFHNVVQ--SSSCSAPHTGEPFDPRDYKTLRIA--LAEKVG 695
KEQ S + A D + + T ++ + S S P RD + LR+ L E V
Sbjct: 508 KEQIASAGVGA--DGIPQVTQDDIAEVVSRSTGVPVAQLTEAERD-RLLRLEQHLHEHVI 564
Query: 696 WQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFG 752
Q++A+ +++AV R R G G R VGS FLGP VGK ++A +LAE +FG
Sbjct: 565 GQEDAVEAVAEAVRRSRAGLGDEDRPVGS-------FLFLGPTGVGKTELARSLAEALFG 617
Query: 753 NKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVF 809
++I +D+S Q + + G V D + + R +PYSVV
Sbjct: 618 EPDRMIRLDMSEFQERHTVSRLVGAPP---------GYVGYDEAGQLTEAVRRRPYSVVL 668
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPV 869
L++++K A P V + L + + G+ TDS GR VS + + TS + G + T V
Sbjct: 669 LDEIEK-AHPDVFNILLQVLDDGRLTDSQGRTVSFKNTVLIMTSNL--GSDLITGSTRSV 725
Query: 870 KFS 872
F
Sbjct: 726 GFG 728
>gi|335039209|ref|ZP_08532387.1| ATPase AAA-2 domain protein [Caldalkalibacillus thermarum TA2.A1]
gi|334180907|gb|EGL83494.1| ATPase AAA-2 domain protein [Caldalkalibacillus thermarum TA2.A1]
Length = 811
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ IS+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 507 LHERVIGQDEAVKAISKAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELAKAL 559
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 560 AESLFGDENAVIRIDM-SEYMEKHTTSRLIGSPPGYVGYEEGGQ-----LTEKVRRKPYS 613
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TD+ GR V + + TS +
Sbjct: 614 VILLDEIEK-AHPDVFNILLQVLEDGRLTDAKGRTVDFKNTVIIMTSNV 661
>gi|315506221|ref|YP_004085108.1| ATPase AAA-2 domain-containing protein [Micromonospora sp. L5]
gi|315412840|gb|ADU10957.1| ATPase AAA-2 domain protein [Micromonospora sp. L5]
Length = 849
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 20/197 (10%)
Query: 664 VQSSSCSAPHTGEPFDPRDYKTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNG---RD 718
V S + P T + RD + LR+ L EK+ QD+A+ +++AV R R G R
Sbjct: 505 VVSRATGIPVTQLTEEERD-RLLRLEGHLHEKIIGQDDAVSAVAEAVRRSRTGLADPDRP 563
Query: 719 VGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQ 778
+GS FLGP VGK ++A ALAE +FG +++ VD+S Q + +
Sbjct: 564 MGS-------FLFLGPTGVGKTELARALAEALFGEADRMVRVDMSEFQERHTVSRLVGAP 616
Query: 779 NIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSY 838
+ + G+ + + R +PY+VV L++++K A P V + L + + G+ TDS
Sbjct: 617 P-GYVGYEEAGQ-----LTEAVRRRPYAVVLLDEIEK-AHPDVFNILLQVLDDGRLTDSQ 669
Query: 839 GRDVSISGMIFVATSTI 855
GR V+ + + TS +
Sbjct: 670 GRTVNFKNTVLIMTSNL 686
>gi|319640979|ref|ZP_07995687.1| hypothetical protein HMPREF9011_01284 [Bacteroides sp. 3_1_40A]
gi|345519372|ref|ZP_08798795.1| ATP-dependent Clp protease [Bacteroides sp. 4_3_47FAA]
gi|254834806|gb|EET15115.1| ATP-dependent Clp protease [Bacteroides sp. 4_3_47FAA]
gi|317387424|gb|EFV68295.1| hypothetical protein HMPREF9011_01284 [Bacteroides sp. 3_1_40A]
Length = 838
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 25/173 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD+AI T+ +A+ R R+G +D N G ++ FLGP VGK +A LA++
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVG-LKD--PNKPIGTFM-FLGPTGVGKTHLAKELAKL 589
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 590 MFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 636
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYS+V L++++K A P V + L + + G+ TDSYGR V I + TS I
Sbjct: 637 KPYSIVLLDEIEK-AHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|352516241|ref|YP_004885558.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Tetragenococcus halophilus NBRC 12172]
gi|348600348|dbj|BAK93394.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Tetragenococcus halophilus NBRC 12172]
Length = 830
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 39/209 (18%)
Query: 674 TGEPFDPRDYKT------LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSK 724
TG P + + K L L E+V QDEA+ +++++ R R G R +GS
Sbjct: 497 TGVPLEQMEKKESQRLLDLEKDLHERVVGQDEAVNAVARSIRRARSGLKDPNRPIGS--- 553
Query: 725 RGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCD 784
FLGP VGK ++A LAE +FG + LI +D+S +
Sbjct: 554 ----FMFLGPTGVGKTELAKTLAESMFGEEDALIRLDMSEYME-------------KYST 596
Query: 785 CKLRGK--VLVDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDS 837
+L G V Y + ++ RSKPYSV+ L++++K A P V ++L + + G+ TDS
Sbjct: 597 SRLIGSPPGYVGYDEGGQLTEKVRSKPYSVILLDEVEK-AHPEVFNTLLQVLDDGQLTDS 655
Query: 838 YGRDVSISGMIFVATSTILKGKHSVHPQT 866
GR V I + TS I G + +T
Sbjct: 656 KGRSVDFRNTILIMTSNI--GAQEIREET 682
>gi|265753580|ref|ZP_06088935.1| ATP-dependent Clp protease [Bacteroides sp. 3_1_33FAA]
gi|263235294|gb|EEZ20818.1| ATP-dependent Clp protease [Bacteroides sp. 3_1_33FAA]
Length = 838
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 104/214 (48%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD+AI T+ +A+ R R+G +D N G ++ FLGP VGK +A LA++
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVG-LKD--PNKPIGTFM-FLGPTGVGKTHLAKELAKL 589
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 590 MFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 636
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++K A P V + L + + G+ TDSYGR V I + TS I G +
Sbjct: 637 KPYSIVLLDEIEK-AHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI--GTRQL 693
Query: 863 HPQTTPVKFSEEIILGAKRWQ---MQTAISHGFA 893
+ F+ +I K + + A++ FA
Sbjct: 694 KEFGKGIGFAAQIRTDDKEYSRSVITKALNKSFA 727
>gi|381184365|ref|ZP_09892990.1| ClpC ATPase [Listeriaceae bacterium TTU M1-001]
gi|380315745|gb|EIA19239.1| ClpC ATPase [Listeriaceae bacterium TTU M1-001]
Length = 820
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 87/174 (50%), Gaps = 27/174 (15%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L E+V QDEA+ +S AV R R G + KR I FLGP VGK ++A ALAE
Sbjct: 505 LHERVIGQDEAVKAVSLAVRRARAGL-----KDPKRPIGSFIFLGPTGVGKTELARALAE 559
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFR 801
+FG++ +I VD+S F +L G V Y + ++ R
Sbjct: 560 SMFGDEDAMIRVDMSEYME-------------KFSTARLVGAPPGYVGYEEGGQLTEKVR 606
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYSVV L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 607 QKPYSVVLLDEIEK-AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|313679912|ref|YP_004057651.1| ATP-dependent clp protease ATP-binding subunit clpa [Oceanithermus
profundus DSM 14977]
gi|313152627|gb|ADR36478.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Oceanithermus
profundus DSM 14977]
Length = 734
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 15/166 (9%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L EKV QD+A+ ++ A+ R R+G +G ++ F+GP VGK ++A ALAE
Sbjct: 445 LREKVVGQDQAVRALASALRRARVG----LGGRARVTASFLFVGPSGVGKTQLAKALAET 500
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNI--DFCDCKLRGKVLVDYIYQEFRSKPYSV 807
+FG++ LI D+S Q +P+SI + + G+ + + R +P+SV
Sbjct: 501 LFGSERALIRFDMSEFQ---EPHSISKLIGAPPGYVGYEQGGR-----LTEAVRRQPFSV 552
Query: 808 VFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
V L++++K A P V + + + G+ TD GR V +I + TS
Sbjct: 553 VLLDEIEK-AHPDVYGAFLQVLDDGRLTDGLGRTVDFRRVILIMTS 597
>gi|150005806|ref|YP_001300550.1| negative regulator of genetic competence [Bacteroides vulgatus ATCC
8482]
gi|294777725|ref|ZP_06743174.1| negative regulator of genetic competence ClpC/MecB [Bacteroides
vulgatus PC510]
gi|149934230|gb|ABR40928.1| negative regulator of genetic competence [Bacteroides vulgatus ATCC
8482]
gi|294448425|gb|EFG16976.1| negative regulator of genetic competence ClpC/MecB [Bacteroides
vulgatus PC510]
Length = 838
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 25/173 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD+AI T+ +A+ R R+G +D N G ++ FLGP VGK +A LA++
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVG-LKD--PNKPIGTFM-FLGPTGVGKTHLAKELAKL 589
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 590 MFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 636
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYS+V L++++K A P V + L + + G+ TDSYGR V I + TS I
Sbjct: 637 KPYSIVLLDEIEK-AHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|319649805|ref|ZP_08003958.1| ATP-dependent Clp protease-like protein [Bacillus sp. 2_A_57_CT2]
gi|317398559|gb|EFV79244.1| ATP-dependent Clp protease-like protein [Bacillus sp. 2_A_57_CT2]
Length = 714
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 17/183 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
+ L +LAEKV Q EA+ +S+A+ R R G R +GS F+GP VGK
Sbjct: 416 QNLEESLAEKVIGQAEAVQKVSKAIRRSRAGLKSKDRPIGS-------FLFVGPTGVGKT 468
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++ LA+ +FG+K +I +D+S + I G + ++
Sbjct: 469 ELTKTLAQELFGSKESMIRLDMSEYMEKHSVSKIIGS------PPGYVGHEEAGQLTEKV 522
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKH 860
R PYS++ L++++KA P VQ + + G+ TDS GR VS + + TS G+
Sbjct: 523 RRNPYSIILLDEIEKA-HPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSNAGAGQK 581
Query: 861 SVH 863
+H
Sbjct: 582 EIH 584
>gi|345515457|ref|ZP_08794959.1| ATP-dependent Clp protease [Bacteroides dorei 5_1_36/D4]
gi|229436091|gb|EEO46168.1| ATP-dependent Clp protease [Bacteroides dorei 5_1_36/D4]
Length = 838
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 25/173 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD+AI T+ +A+ R R+G +D N G ++ FLGP VGK +A LA++
Sbjct: 534 LLSKVIGQDKAIATLVKAIQRSRVG-LKD--PNKPIGTFM-FLGPTGVGKTHLAKELAKL 589
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 590 MFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 636
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYS+V L++++K A P V + L + + G+ TDSYGR V I + TS I
Sbjct: 637 KPYSIVLLDEIEK-AHPDVFNILLQVMDEGRLTDSYGRTVDFKNTIVIMTSNI 688
>gi|187934389|ref|YP_001884443.1| negative regulator of genetic competence ClpC/mecB [Clostridium
botulinum B str. Eklund 17B]
gi|187722542|gb|ACD23763.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum B str. Eklund 17B]
Length = 814
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 33/188 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q EA+ +I++AV R R+G R +G+ FLGP VGK +++ AL
Sbjct: 512 LQKRVIGQTEAVESIAKAVRRARVGIKDPNRPIGT-------FIFLGPTGVGKTELSKAL 564
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +FG++ +I +D+S + NS+ KL G V Y + +
Sbjct: 565 AETMFGDENSIIRIDMSE---YMESNSV----------SKLIGSPPGYVGYDDGGQLTEA 611
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
R KPYSVV L++++KA + + L + + G+ TDS+G+ V+ I + TS + G
Sbjct: 612 VRRKPYSVVLLDEIEKAHQDVF-NILLQIMEDGRLTDSHGKVVNFKNTIVIMTSNV--GA 668
Query: 860 HSVHPQTT 867
H + Q T
Sbjct: 669 HQIKKQKT 676
>gi|422825369|ref|ZP_16873548.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK678]
gi|422856643|ref|ZP_16903299.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1]
gi|422866483|ref|ZP_16913108.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1058]
gi|324995871|gb|EGC27782.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK678]
gi|327460002|gb|EGF06341.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1]
gi|327488592|gb|EGF20392.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1058]
Length = 809
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y L L ++V QDEAI IS+A+ R + G +SKR I FLGP V
Sbjct: 498 DAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGI-----RSSKRPIGSFMFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE +F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAESLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R++PYSV+ ++++K A P + + L + + G+ TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|422857455|ref|ZP_16904105.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1057]
gi|327463506|gb|EGF09825.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1057]
Length = 809
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y L L ++V QDEAI IS+A+ R + G +SKR I FLGP V
Sbjct: 498 DAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGI-----RSSKRPIGSFMFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE +F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAESLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R++PYSV+ ++++K A P + + L + + G+ TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|450132182|ref|ZP_21869889.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NLML8]
gi|449153334|gb|EMB57016.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NLML8]
Length = 813
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R R G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNRSGIRVGKRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 602 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|401682711|ref|ZP_10814601.1| Clp amino terminal domain protein [Streptococcus sp. AS14]
gi|400183951|gb|EJO18198.1| Clp amino terminal domain protein [Streptococcus sp. AS14]
Length = 809
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y L L ++V QDEAI IS+A+ R + G +SKR I FLGP V
Sbjct: 498 DAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGI-----RSSKRPIGSFMFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE +F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAESLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R++PYSV+ ++++K A P + + L + + G+ TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|365156940|ref|ZP_09353224.1| hypothetical protein HMPREF1015_00634 [Bacillus smithii 7_3_47FAA]
gi|363626203|gb|EHL77202.1| hypothetical protein HMPREF1015_00634 [Bacillus smithii 7_3_47FAA]
Length = 720
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 17/174 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA+KV QDEA+ +++A+ R R G R +GS F+GP VGK
Sbjct: 423 KHLEENLAKKVIGQDEAVKKVAKAIKRSRAGLKAKNRPIGS-------FLFVGPTGVGKT 475
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
+++ LAE +FG+K +I +D+S + + G + ++
Sbjct: 476 ELSKTLAEELFGSKDAMIRLDMSEYMEKHSVSKLIG------SPPGYVGHEEAGQLTEKV 529
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
R PYS++ L++++K A P VQ + + G+ TDS GR VS + +ATS
Sbjct: 530 RRNPYSIILLDEIEK-AHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIATSN 582
>gi|422863571|ref|ZP_16910202.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK408]
gi|327472148|gb|EGF17585.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK408]
Length = 809
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y L L ++V QDEAI IS+A+ R + G +SKR I FLGP V
Sbjct: 498 DAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGI-----RSSKRPIGSFMFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE +F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAESLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R++PYSV+ ++++K A P + + L + + G+ TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|422853305|ref|ZP_16899969.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK160]
gi|325697317|gb|EGD39203.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK160]
Length = 809
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y L L ++V QDEAI IS+A+ R + G +SKR I FLGP V
Sbjct: 498 DAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGI-----RSSKRPIGSFMFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE +F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAESLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R++PYSV+ ++++K A P + + L + + G+ TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|145594688|ref|YP_001158985.1| ATPase [Salinispora tropica CNB-440]
gi|145304025|gb|ABP54607.1| ATPase AAA-2 domain protein [Salinispora tropica CNB-440]
Length = 848
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L EKV QD+A+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 533 LHEKVVGQDDAVNAVAEAVRRSRTGLADPDRPMGS-------FLFLGPTGVGKTELARAL 585
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG +++ VD+S Q + + + + G+ + + R +PY+
Sbjct: 586 AEALFGEADRMVRVDMSEFQERHTVSRLVGAPP-GYVGYEEAGQ-----LTEAVRRRPYA 639
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V+ + + TS +
Sbjct: 640 VVLLDEIEK-AHPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSNL 687
>gi|422872444|ref|ZP_16918937.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1087]
gi|422877466|ref|ZP_16923936.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1056]
gi|328944694|gb|EGG38855.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1087]
gi|332360105|gb|EGJ37919.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1056]
Length = 809
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y L L ++V QDEAI IS+A+ R + G +SKR I FLGP V
Sbjct: 498 DAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGI-----RSSKRPIGSFMFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE +F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAESLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R++PYSV+ ++++K A P + + L + + G+ TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|323350649|ref|ZP_08086310.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis VMC66]
gi|322123069|gb|EFX94760.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis VMC66]
Length = 809
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y L L ++V QDEAI IS+A+ R + G +SKR I FLGP V
Sbjct: 498 DAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGI-----RSSKRPIGSFMFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE +F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAESLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R++PYSV+ ++++K A P + + L + + G+ TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|125718981|ref|YP_001036114.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
sanguinis SK36]
gi|125498898|gb|ABN45564.1| ATP-dependent Clp protease, ATP-binding subunit, putative
[Streptococcus sanguinis SK36]
Length = 809
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y L L ++V QDEAI IS+A+ R + G +SKR I FLGP V
Sbjct: 498 DAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGI-----RSSKRPIGSFMFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE +F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAESLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R++PYSV+ ++++K A P + + L + + G+ TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|422880952|ref|ZP_16927408.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK355]
gi|332365652|gb|EGJ43411.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK355]
Length = 809
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y L L ++V QDEAI IS+A+ R + G +SKR I FLGP V
Sbjct: 498 DAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGI-----RSSKRPIGSFMFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE +F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAESLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R++PYSV+ ++++K A P + + L + + G+ TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|422861654|ref|ZP_16908294.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK330]
gi|327467887|gb|EGF13377.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK330]
Length = 809
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y L L ++V QDEAI IS+A+ R + G +SKR I FLGP V
Sbjct: 498 DAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGI-----RSSKRPIGSFMFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE +F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAESLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R++PYSV+ ++++K A P + + L + + G+ TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|422824550|ref|ZP_16872737.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK405]
gi|324992599|gb|EGC24520.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK405]
Length = 809
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y L L ++V QDEAI IS+A+ R + G +SKR I FLGP V
Sbjct: 498 DAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGI-----RSSKRPIGSFMFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE +F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAESLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R++PYSV+ ++++K A P + + L + + G+ TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|422850628|ref|ZP_16897298.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK150]
gi|325695376|gb|EGD37276.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK150]
Length = 809
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y L L ++V QDEAI IS+A+ R + G +SKR I FLGP V
Sbjct: 498 DAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGI-----RSSKRPIGSFMFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE +F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAESLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R++PYSV+ ++++K A P + + L + + G+ TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|159037904|ref|YP_001537157.1| ATPase [Salinispora arenicola CNS-205]
gi|157916739|gb|ABV98166.1| ATPase AAA-2 domain protein [Salinispora arenicola CNS-205]
Length = 848
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L EKV QD+A+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 533 LHEKVVGQDDAVNAVAEAVRRSRTGLADPERPMGS-------FLFLGPTGVGKTELARAL 585
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG +++ VD+S Q + + + + G+ + + R +PY+
Sbjct: 586 AEALFGEADRMVRVDMSEFQERHTVSRLVGAPP-GYVGYEEAGQ-----LTEAVRRRPYA 639
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V+ + + TS +
Sbjct: 640 VVLLDEIEK-AHPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSNL 687
>gi|422885168|ref|ZP_16931616.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK49]
gi|332358139|gb|EGJ35971.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK49]
Length = 809
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y L L ++V QDEAI IS+A+ R + G +SKR I FLGP V
Sbjct: 498 DAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGI-----RSSKRPIGSFMFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE +F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAESLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R++PYSV+ ++++K A P + + L + + G+ TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|451979932|ref|ZP_21928334.1| Chaperone protein ClpB [Nitrospina gracilis 3/211]
gi|451762804|emb|CCQ89548.1| Chaperone protein ClpB [Nitrospina gracilis 3/211]
Length = 808
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L K+ Q EA+ I++A+ R R G R +G+ FLGP VGK ++A AL
Sbjct: 502 LGNKIVGQKEAVEAITKAIRRSRSGLKDMRRPIGT-------FLFLGPTGVGKTELAGAL 554
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG + LI +D +S+ F+ + G + ++ R KPYS
Sbjct: 555 AEFLFGQRDALIRLD------MSEYMEKFNVSRLTGAPPGYVGYEEGGQLTEKVRRKPYS 608
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A+P V L + + G+ TDSYGR+V + + TS I
Sbjct: 609 VVLFDEIEK-ANPDVFHLLLQIMDDGRLTDSYGRNVDFKNTVIILTSNI 656
>gi|422822606|ref|ZP_16870799.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK353]
gi|324989876|gb|EGC21819.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK353]
Length = 809
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y L L ++V QDEAI IS+A+ R + G +SKR I FLGP V
Sbjct: 498 DAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGI-----RSSKRPIGSFMFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE +F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAESLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R++PYSV+ ++++K A P + + L + + G+ TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|20808693|ref|NP_623864.1| chaperone ATPase [Thermoanaerobacter tengcongensis MB4]
gi|254478740|ref|ZP_05092109.1| ATPase, AAA family [Carboxydibrachium pacificum DSM 12653]
gi|20517331|gb|AAM25468.1| ATPases with chaperone activity, ATP-binding subunit
[Thermoanaerobacter tengcongensis MB4]
gi|214035305|gb|EEB76010.1| ATPase, AAA family [Carboxydibrachium pacificum DSM 12653]
Length = 816
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 19/181 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +++A+ R R+G R +GS FLGP VGK +++ AL
Sbjct: 508 LHERVIGQDEAVEAVAKAIRRARVGLKDPKRPIGS-------FIFLGPTGVGKTELSKAL 560
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+S + + + + G+ + ++ R +PYS
Sbjct: 561 AEALFGDENAMIRLDMSEYMERHTVSKLIGSPP-GYVGFEEGGQ-----LTEKVRRRPYS 614
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
V+ L++++K A P V + L + + G+ TDS GR V + + TS + G + QT
Sbjct: 615 VILLDEIEK-AHPDVFNILLQILEDGRLTDSKGRTVDFKNTVIIMTSNV--GAELLKKQT 671
Query: 867 T 867
T
Sbjct: 672 T 672
>gi|422847700|ref|ZP_16894383.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK72]
gi|325686698|gb|EGD28724.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK72]
Length = 809
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y L L ++V QDEAI IS+A+ R + G +SKR I FLGP V
Sbjct: 498 DAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGI-----RSSKRPIGSFMFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE +F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAESLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R++PYSV+ ++++K A P + + L + + G+ TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|422879819|ref|ZP_16926284.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1059]
gi|422929663|ref|ZP_16962604.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis ATCC 29667]
gi|422932631|ref|ZP_16965562.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK340]
gi|332365230|gb|EGJ42993.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK1059]
gi|339614467|gb|EGQ19166.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis ATCC 29667]
gi|339618382|gb|EGQ22980.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK340]
Length = 809
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y L L ++V QDEAI IS+A+ R + G +SKR I FLGP V
Sbjct: 498 DAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGI-----RSSKRPIGSFMFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE +F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAESLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R++PYSV+ ++++K A P + + L + + G+ TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|450125120|ref|ZP_21867472.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans U2A]
gi|449232913|gb|EMC32004.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans U2A]
Length = 814
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R R G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNRSGIRVGKRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 602 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|261417579|ref|YP_003251261.1| ATPase AAA [Geobacillus sp. Y412MC61]
gi|319765237|ref|YP_004130738.1| ATPase AAA [Geobacillus sp. Y412MC52]
gi|261374036|gb|ACX76779.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC61]
gi|317110103|gb|ADU92595.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC52]
Length = 810
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ LI +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AEAMFGDEDALIRIDM-SEYMEKHSTSRLIGSPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V I + TS +
Sbjct: 613 VVLLDEMEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNV 660
>gi|149007762|ref|ZP_01831371.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP18-BS74]
gi|418113531|ref|ZP_12750527.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41538]
gi|419467871|ref|ZP_14007749.1| AAA domain family protein [Streptococcus pneumoniae GA05248]
gi|419513586|ref|ZP_14053216.1| AAA domain family protein [Streptococcus pneumoniae GA05578]
gi|419517799|ref|ZP_14057411.1| AAA domain family protein [Streptococcus pneumoniae GA02506]
gi|421284339|ref|ZP_15735121.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04216]
gi|147760757|gb|EDK67729.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pneumoniae SP18-BS74]
gi|353781742|gb|EHD62183.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA41538]
gi|379542293|gb|EHZ07451.1| AAA domain family protein [Streptococcus pneumoniae GA05248]
gi|379632873|gb|EHZ97443.1| AAA domain family protein [Streptococcus pneumoniae GA05578]
gi|379637449|gb|EIA02005.1| AAA domain family protein [Streptococcus pneumoniae GA02506]
gi|395879353|gb|EJG90413.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
pneumoniae GA04216]
Length = 810
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATSTI 855
+ TS +
Sbjct: 658 IIMTSNL 664
>gi|239825665|ref|YP_002948289.1| ATPase AAA [Geobacillus sp. WCH70]
gi|239805958|gb|ACS23023.1| ATPase AAA-2 domain protein [Geobacillus sp. WCH70]
Length = 811
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 507 LHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 559
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ LI +D+ SE S + + G+ + ++ R KPYS
Sbjct: 560 AEAMFGDEDALIRIDM-SEYMEKHSTSRLIGSPPGYVGYEEGGQ-----LTEKVRRKPYS 613
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V I + TS +
Sbjct: 614 VVLLDEMEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNV 661
>gi|150392194|ref|YP_001322243.1| ATPase [Alkaliphilus metalliredigens QYMF]
gi|149952056|gb|ABR50584.1| ATPase AAA-2 domain protein [Alkaliphilus metalliredigens QYMF]
Length = 812
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 23/185 (12%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L AL +V Q+ A+ +ISQA+ R R+G R +GS FLGP VGK ++
Sbjct: 505 LEEALHHRVIGQEPAVKSISQAIRRARVGLKDPKRPIGS-------FIFLGPTGVGKTEL 557
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEF 800
+ ALAE++FG++ +I +D+S + + + F + + ++
Sbjct: 558 SRALAEVMFGDEDAMIRIDMSEYMEKHTVSRLIGSPPGYVGFNEG--------GQLTEKV 609
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKH 860
R KPYSVV ++++K A P V + L + + G+ TD+ GR ++ + + TS + G H
Sbjct: 610 RRKPYSVVLFDEIEK-AHPDVFNVLLQILDDGRLTDAQGRMINFKNTVIIMTSNV--GAH 666
Query: 861 SVHPQ 865
++ Q
Sbjct: 667 TIKKQ 671
>gi|422849964|ref|ZP_16896640.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK115]
gi|325688852|gb|EGD30860.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
sanguinis SK115]
Length = 809
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y L L ++V QDEAI IS+A+ R + G +SKR I FLGP V
Sbjct: 498 DAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGI-----RSSKRPIGSFMFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE +F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAESLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R++PYSV+ ++++K A P + + L + + G+ TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|419443598|ref|ZP_13983618.1| AAA domain family protein [Streptococcus pneumoniae GA13224]
gi|379549149|gb|EHZ14260.1| AAA domain family protein [Streptococcus pneumoniae GA13224]
Length = 810
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE +F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEALFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|157150882|ref|YP_001451248.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
gordonii str. Challis substr. CH1]
gi|157075676|gb|ABV10359.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
gordonii str. Challis substr. CH1]
Length = 809
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEAI IS+A+ R + G N R +GS FLGP
Sbjct: 498 DAKKYLHLEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE +F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAETLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R++PYSV+ ++++K A P + + L + + G TDS GR + S I
Sbjct: 598 GYEEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|297560333|ref|YP_003679307.1| ATPase AAA [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296844781|gb|ADH66801.1| ATPase AAA-2 domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 830
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +S+A+ R R G G R VGS FLGP VGK ++A AL
Sbjct: 528 LHERVIGQDEAVTAVSEAIRRSRAGLGDPDRPVGS-------FLFLGPTGVGKTELARAL 580
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ ++ +D+S Q S F + G+ + + R PYS
Sbjct: 581 AEALFGSEDSMVRIDMSEFQE-RHTASRLTGAPPGFVGYEEAGQ-----LTEAVRRHPYS 634
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TD GR V + + TS +
Sbjct: 635 VLLLDEVEK-AHPDVFNLLLQLLDDGRLTDGQGRTVDFRNTVVIMTSNL 682
>gi|312109233|ref|YP_003987549.1| ATPase AAA [Geobacillus sp. Y4.1MC1]
gi|336233627|ref|YP_004586243.1| ATPase AAA-2 domain-containing protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311214334|gb|ADP72938.1| ATPase AAA-2 domain protein [Geobacillus sp. Y4.1MC1]
gi|335360482|gb|AEH46162.1| ATPase AAA-2 domain protein [Geobacillus thermoglucosidasius
C56-YS93]
Length = 812
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 508 LHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 560
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ LI +D+ SE S + + G+ + ++ R KPYS
Sbjct: 561 AEAMFGDEDALIRIDM-SEYMEKHSTSRLIGSPPGYVGYEEGGQ-----LTEKVRRKPYS 614
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V I + TS +
Sbjct: 615 VVLLDEMEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNV 662
>gi|423718349|ref|ZP_17692531.1| ATP-dependent Clp protease ATP-binding subunit clpA [Geobacillus
thermoglucosidans TNO-09.020]
gi|383365159|gb|EID42460.1| ATP-dependent Clp protease ATP-binding subunit clpA [Geobacillus
thermoglucosidans TNO-09.020]
Length = 810
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ LI +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AEAMFGDEDALIRIDM-SEYMEKHSTSRLIGSPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V I + TS +
Sbjct: 613 VVLLDEMEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNV 660
>gi|56418613|ref|YP_145931.1| ATP-dependent Clp protease ATPase [Geobacillus kaustophilus HTA426]
gi|297528454|ref|YP_003669729.1| ATPase AAA [Geobacillus sp. C56-T3]
gi|375006890|ref|YP_004980520.1| negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|448236388|ref|YP_007400446.1| ATP-dependent Clp protease [Geobacillus sp. GHH01]
gi|56378455|dbj|BAD74363.1| ATP-dependent Clp protease ATPase subunit [Geobacillus kaustophilus
HTA426]
gi|297251706|gb|ADI25152.1| ATPase AAA-2 domain protein [Geobacillus sp. C56-T3]
gi|359285736|gb|AEV17420.1| Negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|445205230|gb|AGE20695.1| ATP-dependent Clp protease [Geobacillus sp. GHH01]
Length = 810
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ LI +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AEAMFGDEDALIRIDM-SEYMEKHSTSRLIGSPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V I + TS +
Sbjct: 613 VVLLDEMEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNV 660
>gi|320547613|ref|ZP_08041898.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
equinus ATCC 9812]
gi|320447688|gb|EFW88446.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
equinus ATCC 9812]
Length = 813
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y TL L ++V QD AI IS+A+ R + G R +GS FLGP
Sbjct: 502 DSKKYLTLEKELHKRVIGQDAAISAISRAIRRNQAGIRTGKRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAELLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 602 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|417677915|ref|ZP_12327318.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17545]
gi|418156168|ref|ZP_12792889.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16242]
gi|418226569|ref|ZP_12853193.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP112]
gi|332071276|gb|EGI81771.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA17545]
gi|353818357|gb|EHD98556.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae GA16242]
gi|353879209|gb|EHE59036.1| ATPase associated with various cellular activities family protein
[Streptococcus pneumoniae NP112]
Length = 810
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATSTI 855
+ TS +
Sbjct: 658 IIMTSNL 664
>gi|15675834|ref|NP_270008.1| endopeptidase Clp ATP-binding subunit C [Streptococcus pyogenes
SF370]
gi|71911576|ref|YP_283126.1| negative regulator of genetic competence [Streptococcus pyogenes
MGAS5005]
gi|410681417|ref|YP_006933819.1| clp amino terminal domain-containing protein [Streptococcus
pyogenes A20]
gi|13623064|gb|AAK34729.1| putative endopeptidase Clp ATP-binding chain C [Streptococcus
pyogenes M1 GAS]
gi|71854358|gb|AAZ52381.1| negative regulator of genetic competence [Streptococcus pyogenes
MGAS5005]
gi|395454783|dbj|BAM31122.1| negative regulator of genetic competence [Streptococcus pyogenes M1
476]
gi|409694006|gb|AFV38866.1| clp amino terminal domain protein [Streptococcus pyogenes A20]
Length = 814
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQDAAVTAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDEAALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + Q+ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTQKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGILTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|330468567|ref|YP_004406310.1| ATPase AAA-2 domain-containing protein [Verrucosispora maris
AB-18-032]
gi|328811538|gb|AEB45710.1| ATPase AAA-2 domain-containing protein [Verrucosispora maris
AB-18-032]
Length = 851
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L EKV QD+A+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 533 LHEKVIGQDDAVNAVAEAVRRSRTGLADPHRPMGS-------FLFLGPTGVGKTELARAL 585
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG +++ VD+S Q + + + + G+ + + R +PY+
Sbjct: 586 AEALFGEADRMVRVDMSEFQERHTVSRLVGAPP-GYVGYEEAGQ-----LTEAVRRRPYA 639
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V+ + + TS +
Sbjct: 640 VVLLDEIEK-AHPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSNL 687
>gi|320102509|ref|YP_004178100.1| ATPase AAA-2 domain-containing protein [Isosphaera pallida ATCC
43644]
gi|319749791|gb|ADV61551.1| ATPase AAA-2 domain protein [Isosphaera pallida ATCC 43644]
Length = 844
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 20/210 (9%)
Query: 649 SAEFDAVSEGTFHNVVQSSSCSAPHTG-EPFDPRDYKTLRIALAEKVGWQDEAICTISQA 707
S E D +G V S P T E + + L KV Q EAI IS+A
Sbjct: 470 SREMDGTVDGEVVAEVVSKMTGIPLTRLEAEETSRLLKMEEELKAKVISQHEAIARISRA 529
Query: 708 VSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQ 766
V R R G N +R I F GP VGK +A +LAE +FGN LI +D+S
Sbjct: 530 VRRSRAGV-----KNPRRPIGCFIFAGPTGVGKTHLAKSLAEFMFGNADSLIQIDMS--- 581
Query: 767 RVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFLEDLDKAADPIVQS 823
+ N+ G V + + ++ R +PYSVV L++++K A P V +
Sbjct: 582 ------EYMEKHNVSRLIGAPPGYVGYEEGGQLTEKIRRRPYSVVLLDEIEK-AHPDVFN 634
Query: 824 SLTKAISTGKFTDSYGRDVSISGMIFVATS 853
L + + G+ TDS+GR V I + T+
Sbjct: 635 MLLQIMEEGRLTDSFGRHVDFKNTILIMTT 664
>gi|94993294|ref|YP_601393.1| negative regulator of genetic competence clpC/mecB, partial
[Streptococcus pyogenes MGAS2096]
gi|94546802|gb|ABF36849.1| Negative regulator of genetic competence clpC/mecB [Streptococcus
pyogenes MGAS2096]
Length = 472
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD A+ IS+A+ R + G R +GS FLGP
Sbjct: 161 DSKKYLNLEKELHKRVIGQDAAVTAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 213
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 214 GVGKTELAKALAEVLFDDEAALIRFDMSEYME-------------KFAASRLNGAPPGYV 260
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + Q+ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 261 GYDEGGELTQKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGILTDSRGRKVDFSNTI 319
Query: 849 FVATSTI 855
+ TS +
Sbjct: 320 IIMTSNL 326
>gi|94989403|ref|YP_597504.1| negative regulator of genetic competence [Streptococcus pyogenes
MGAS9429]
gi|417857637|ref|ZP_12502696.1| negative regulator of genetic competence clpC/mecB [Streptococcus
pyogenes HKU QMH11M0907901]
gi|94542911|gb|ABF32960.1| negative regulator of genetic competence [Streptococcus pyogenes
MGAS9429]
gi|94544848|gb|ABF34896.1| Negative regulator of genetic competence clpC/mecB [Streptococcus
pyogenes MGAS10270]
gi|387934592|gb|EIK42705.1| negative regulator of genetic competence clpC/mecB [Streptococcus
pyogenes HKU QMH11M0907901]
Length = 814
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQDAAVTAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDEAALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + Q+ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTQKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGILTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|19746949|ref|NP_608085.1| endopeptidase Clp ATP-binding chain C [Streptococcus pyogenes
MGAS8232]
gi|19749200|gb|AAL98584.1| putative endopeptidase Clp ATP-binding chain C [Streptococcus
pyogenes MGAS8232]
Length = 814
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQDAAVTAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDEAALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + Q+ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTQKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGILTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|262283594|ref|ZP_06061359.1| ATP-dependent Clp proteinase [Streptococcus sp. 2_1_36FAA]
gi|262260651|gb|EEY79352.1| ATP-dependent Clp proteinase [Streptococcus sp. 2_1_36FAA]
Length = 809
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEAI IS+A+ R + G N R +GS FLGP
Sbjct: 498 DAKKYLHLEEELHKRVIGQDEAISAISRAIRRNQSGIRANKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE +F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAETLFDDESALIRFDMSEYME-------------KFVASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R++PYSV+ ++++K A P + + L + + G TDS GR + S I
Sbjct: 598 GYEEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKIDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|71904411|ref|YP_281214.1| negative regulator of genetic competence [Streptococcus pyogenes
MGAS6180]
gi|71803506|gb|AAX72859.1| negative regulator of genetic competence [Streptococcus pyogenes
MGAS6180]
Length = 814
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQDAAVTAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDEAALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + Q+ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTQKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGILTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|383480723|ref|YP_005389617.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
pyogenes MGAS15252]
gi|383494704|ref|YP_005412380.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
pyogenes MGAS1882]
gi|378928713|gb|AFC66919.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
pyogenes MGAS15252]
gi|378930431|gb|AFC68848.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
pyogenes MGAS1882]
Length = 814
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQDAAVTAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDEAALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + Q+ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTQKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGILTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|94995253|ref|YP_603351.1| Negative regulator of genetic competence clpC/mecB [Streptococcus
pyogenes MGAS10750]
gi|94548761|gb|ABF38807.1| Negative regulator of genetic competence clpC/mecB [Streptococcus
pyogenes MGAS10750]
Length = 814
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQDAAVTAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDEAALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + Q+ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTQKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGILTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|384439305|ref|YP_005654029.1| ATPase AAA-2 [Thermus sp. CCB_US3_UF1]
gi|359290438|gb|AEV15955.1| ATPase AAA-2 [Thermus sp. CCB_US3_UF1]
Length = 736
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 679 DPRDYKTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDK 736
D D K +R+ L ++V Q+EAI ++ A+ R R+G +G ++ F+G
Sbjct: 432 DKDDEKLMRLEEELKKRVVGQEEAIRALASALRRARVG----LGGRTRVAASFLFVGQSG 487
Query: 737 VGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNI--DFCDCKLRGKVLVD 794
VGK ++A ALAE++FG++ LI D+S Q +P+SI + + G+
Sbjct: 488 VGKTQLAKALAEVLFGSERALIRFDMSEFQ---EPHSISKLIGAPPGYVGYEQGGR---- 540
Query: 795 YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ + R +P+SVV L++++K A P V ++ + + G+ TD GR V +I + TS
Sbjct: 541 -LTEAVRRQPFSVVLLDEIEK-AHPDVYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTS 597
>gi|312135577|ref|YP_004002915.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
owensensis OL]
gi|311775628|gb|ADQ05115.1| ATPase AAA-2 domain protein [Caldicellulosiruptor owensensis OL]
Length = 829
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +++A+ R R+G R +GS FLGP VGK ++A AL
Sbjct: 513 LHRRVVGQDEAVKAVARAIRRGRVGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 565
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG + LI +D +S+ F+ + G + ++ R +PYS
Sbjct: 566 AEALFGTEDALIRID------MSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYS 619
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P V + L + + G+ TDS GR VS + + TS I
Sbjct: 620 VVLFDEIEK-AHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|302335816|ref|YP_003801023.1| ATPase AAA-2 domain-containing protein [Olsenella uli DSM 7084]
gi|301319656|gb|ADK68143.1| ATPase AAA-2 domain protein [Olsenella uli DSM 7084]
Length = 761
Score = 80.1 bits (196), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 134/298 (44%), Gaps = 44/298 (14%)
Query: 580 TKPQSNNDEHLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKLID- 638
T + ++DE LL L + Y+ S++ A + + +GL Y S R + + K ID
Sbjct: 342 TIEEPDSDETLLILDGLKERYESFHGVSYTSEA-LESAVGLSGRYLSGRHQPD--KAIDV 398
Query: 639 ----NKEQCFSGSI--SAEFDAVSEGTF----HNVVQ-SSSCSAPHTGEPFDPRDYKTLR 687
C+ ++ + E SEG H V + S S + + + L+
Sbjct: 399 MDAAGARLCYESTMGEAGETGLASEGAVVVDKHLVAEIVSEASGVPVSRLTEEQSKRLLK 458
Query: 688 I--ALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKR-GIWLAFLGPDKVGKKKIAS 744
+ AL +V QDEA+ +S+ + R R G S+ +R G FLGP VGK ++A
Sbjct: 459 MEEALERRVVGQDEAVSVVSKTIRRVRAGL-----SDPRRPGGSFLFLGPTGVGKTELAK 513
Query: 745 ALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IY 797
ALAE +FG++G LI D+S F +L G V Y +
Sbjct: 514 ALAEFLFGSEGSLITFDMSEYME-------------KFAVSRLIGAPPGYVGYDEGGQLT 560
Query: 798 QEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ R PYSV+ ++++K A P V + L + + G+ TD GR V+ I + TS +
Sbjct: 561 KAVRLHPYSVILFDEMEK-AHPDVFNILLQVLEEGRLTDGQGRKVNFRNAIVIMTSNV 617
>gi|320095436|ref|ZP_08027113.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 178 str. F0338]
gi|319977629|gb|EFW09295.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 178 str. F0338]
Length = 822
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 29/225 (12%)
Query: 640 KEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPF----DPRDYKTLRIA--LAEK 693
KE + G E D ++E T H + + + S TG P K LR+ L ++
Sbjct: 467 KEAAWKG---GESDEIAEVTDHEIAEVLAMS---TGIPVVRLTQTETSKLLRMEDELHKR 520
Query: 694 VGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGN 753
V QDEA+ ++Q++ R R G + ++ G F GP VGK ++A ALAE +FG+
Sbjct: 521 VIGQDEAVKALAQSIRRTRSG----LKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGD 576
Query: 754 KGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFL 810
+ L+ +D+S + +F G V D + ++ R KP+SVV
Sbjct: 577 EDALVQLDMSEFSEKHTASRLFGAPP---------GYVGYDEGGQLTEKVRRKPFSVVLF 627
Query: 811 EDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P + +SL + + G+ TDS GR V + + T+ +
Sbjct: 628 DEVEK-AHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNL 671
>gi|138893757|ref|YP_001124210.1| negative regulator of genetic competence ClpC/MecB [Geobacillus
thermodenitrificans NG80-2]
gi|196251133|ref|ZP_03149812.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
gi|134265270|gb|ABO65465.1| Negative regulator of genetic competence ClpC/MecB [Geobacillus
thermodenitrificans NG80-2]
gi|196209374|gb|EDY04154.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
Length = 811
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 507 LHARVVGQDEAVKAVAKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 559
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ LI +D+ SE S + + G+ + ++ R KPYS
Sbjct: 560 AEAMFGDEDALIRIDM-SEYMEKHSTSRLIGSPPGYVGYEEGGQ-----LTEKVRRKPYS 613
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V I + TS +
Sbjct: 614 VVLLDEMEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNV 661
>gi|21911303|ref|NP_665571.1| endopeptidase Clp ATP-binding chain C [Streptococcus pyogenes
MGAS315]
gi|28896676|ref|NP_803026.1| endopeptidase Clp ATP-binding chain C [Streptococcus pyogenes
SSI-1]
gi|21905517|gb|AAM80374.1| putative endopeptidase Clp ATP-binding chain C [Streptococcus
pyogenes MGAS315]
gi|28811930|dbj|BAC64859.1| putative endopeptidase Clp ATP-binding chain C [Streptococcus
pyogenes SSI-1]
Length = 814
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQDAAVTAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDEAALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + Q+ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTQKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGILTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|389816088|ref|ZP_10207275.1| Class III stress response-related ATPase, ClpC [Planococcus
antarcticus DSM 14505]
gi|388465352|gb|EIM07670.1| Class III stress response-related ATPase, ClpC [Planococcus
antarcticus DSM 14505]
Length = 818
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 17/173 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L +V QDEA+ +IS+A+ R R G R +GS FLGP VGK ++
Sbjct: 502 LEAILHNRVIGQDEAVTSISKAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTEL 554
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A ALAE +FG++ +I +D+ SE S + + G+ + ++ R
Sbjct: 555 ARALAESMFGDEDAMIRIDM-SEYMERHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRR 608
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYSV+ L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 609 KPYSVILLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRRVDFRNTVIIMTSNV 660
>gi|385261014|ref|ZP_10039147.1| Clp amino terminal domain protein [Streptococcus sp. SK140]
gi|385189600|gb|EIF37062.1| Clp amino terminal domain protein [Streptococcus sp. SK140]
Length = 810
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQEQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|309799549|ref|ZP_07693778.1| ClpC [Streptococcus infantis SK1302]
gi|308116825|gb|EFO54272.1| ClpC [Streptococcus infantis SK1302]
Length = 810
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQEQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|417850359|ref|ZP_12496268.1| chaperone protein ClpB [Streptococcus mitis SK1080]
gi|339452754|gb|EGP65376.1| chaperone protein ClpB [Streptococcus mitis SK1080]
Length = 810
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ +IS+A+ R + G + R +GS FLGP
Sbjct: 499 DAKKYLNLEAELHKRVIGQNQAVSSISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 552 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 598
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 599 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 657
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V ++F +E
Sbjct: 658 IIMTSNLGATALRDDKTVGFGAKDIRFDQE 687
>gi|386363532|ref|YP_006072863.1| ATPase associated with various cellular activities family protein
[Streptococcus pyogenes Alab49]
gi|350277941|gb|AEQ25309.1| ATPase associated with various cellular activities family protein
[Streptococcus pyogenes Alab49]
Length = 814
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQDAAVTAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDEAALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + Q+ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTQKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGILTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|171777589|ref|ZP_02919277.1| hypothetical protein STRINF_00112 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283198|gb|EDT48622.1| ATPase family associated with various cellular activities (AAA)
[Streptococcus infantarius subsp. infantarius ATCC
BAA-102]
Length = 813
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 90/185 (48%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y TL L ++V QD AI IS+A+ R + G KR I FLGP V
Sbjct: 502 DSKKYLTLEKELHKRVTGQDAAISAISRAIRRNQAGI-----RTGKRPIASFMFLGPTGV 556
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE++F ++ LI D+S F +L G V Y
Sbjct: 557 GKTELAKALAELLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 603
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I +
Sbjct: 604 EEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTIII 662
Query: 851 ATSTI 855
TS +
Sbjct: 663 MTSNL 667
>gi|139474523|ref|YP_001129239.1| stress response-related Clp ATPase [Streptococcus pyogenes str.
Manfredo]
gi|134272770|emb|CAM31045.1| putative stress response-related Clp ATPase [Streptococcus pyogenes
str. Manfredo]
Length = 814
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQDAAVTAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDEAALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + Q+ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTQKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGILTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|379706161|ref|YP_005204620.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
infantarius subsp. infantarius CJ18]
gi|374682860|gb|AEZ63149.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
infantarius subsp. infantarius CJ18]
Length = 808
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 90/185 (48%), Gaps = 27/185 (14%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D + Y TL L ++V QD AI IS+A+ R + G KR I FLGP V
Sbjct: 497 DSKKYLTLEKELHKRVTGQDAAISAISRAIRRNQAGI-----RTGKRPIASFMFLGPTGV 551
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE++F ++ LI D+S F +L G V Y
Sbjct: 552 GKTELAKALAELLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 598
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I +
Sbjct: 599 EEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTIII 657
Query: 851 ATSTI 855
TS +
Sbjct: 658 MTSNL 662
>gi|363899121|ref|ZP_09325632.1| hypothetical protein HMPREF9625_00292 [Oribacterium sp. ACB1]
gi|395209294|ref|ZP_10398388.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. ACB8]
gi|361959451|gb|EHL12738.1| hypothetical protein HMPREF9625_00292 [Oribacterium sp. ACB1]
gi|394704925|gb|EJF12454.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. ACB8]
Length = 818
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 23/172 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +SQA+ R R+G R +GS FLGP VGK +++ AL
Sbjct: 509 LHTRVIGQNEAVHAVSQAIKRGRVGLKDPKRPIGS-------FMFLGPTGVGKTELSKAL 561
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE+VFG++ LI VD+S + + G V D + ++ R
Sbjct: 562 AEVVFGSEQNLIRVDMSEYMEKYSVSKMIGSPP---------GYVGYDEGGQLSEKVRRN 612
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSV+ ++++K A P V + L + + G TDS GR VS I + TS +
Sbjct: 613 PYSVILFDEIEK-AHPDVLNILLQVLDDGHITDSQGRKVSFKNTIIIMTSNV 663
>gi|450088019|ref|ZP_21854586.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NV1996]
gi|449216939|gb|EMC17018.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NV1996]
Length = 813
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI +D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRLDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|335356603|ref|ZP_08548473.1| negative regulator of genetic competence [Lactobacillus animalis
KCTC 3501]
Length = 830
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 90/176 (51%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEAI +I++A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 517 LHQRVVGQDEAISSIAKAIRRSRSGLSDPTRPIGS-------FMFLGPTGVGKTELAKAL 569
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +FG++ +I VD+S + +L G V Y + ++
Sbjct: 570 AEAMFGSEDAMIRVDMSEYME-------------KYSTSRLVGAPPGYVGYDEGGQLSEK 616
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R+KPYSVV L++++K A P V + L + + G TDS GR V+ I + TS +
Sbjct: 617 VRNKPYSVVLLDEVEK-AHPDVFNILLQVLDDGYLTDSKGRKVNFRNTIIIMTSNL 671
>gi|332982904|ref|YP_004464345.1| ATPase AAA-2 domain-containing protein [Mahella australiensis 50-1
BON]
gi|332700582|gb|AEE97523.1| ATPase AAA-2 domain protein [Mahella australiensis 50-1 BON]
Length = 855
Score = 79.7 bits (195), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 19/177 (10%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVG 738
K LR+ L ++V QDEA+ +S+AV R R G R +GS FLGP VG
Sbjct: 555 KLLRMEGELHKRVVGQDEAVKAVSEAVRRARTGLKDPNRPIGS-------FIFLGPTGVG 607
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K ++A ALAE +FG++ +I +D+S + + + + G+ + +
Sbjct: 608 KTELARALAEFLFGDEDAMIRIDMSEYMEKHTVSRLIGAPP-GYVGHEEGGQ-----LTE 661
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV ++++K A P V + L + + G+ TDS+G+ V + + TS I
Sbjct: 662 AVRRKPYSVVLFDEIEK-AHPDVFNILLQILDDGRLTDSHGKTVDFKNTVIIMTSNI 717
>gi|417006207|ref|ZP_11944777.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
agalactiae FSL S3-026]
gi|341576388|gb|EGS26799.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
agalactiae FSL S3-026]
Length = 815
Score = 79.7 bits (195), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 117/261 (44%), Gaps = 39/261 (14%)
Query: 612 ASVTTDLGLGKIYPSTRQEANTPKLIDNKEQCFSGSISAEFD-------AVSEGTFHNVV 664
AS T + + K PS E + ++D+ + S ++ A + AV+E +
Sbjct: 429 ASATVQMMIKKNAPSLLTEVDQA-ILDDDMKSASKALKASYKGKKRKPIAVTEDHIMATL 487
Query: 665 QSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGS 721
S D + Y L L ++V QD+A+ IS+A+ R + G R +GS
Sbjct: 488 SRLSGIPVEKLTQADSKKYLNLEKELHKRVIGQDDAVTAISRAIRRNQSGIRTGKRPIGS 547
Query: 722 NSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNID 781
FLGP VGK ++A ALAE++F ++ LI D+S
Sbjct: 548 -------FMFLGPTGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------K 587
Query: 782 FCDCKLRGK--VLVDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKF 834
F +L G V Y + ++ R+KPYSV+ ++++K A P + + L + + G
Sbjct: 588 FAASRLNGAPPGYVGYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVL 646
Query: 835 TDSYGRDVSISGMIFVATSTI 855
TDS GR V S I + TS +
Sbjct: 647 TDSRGRKVDFSNTIIIMTSNL 667
>gi|149183498|ref|ZP_01861926.1| ClpC [Bacillus sp. SG-1]
gi|148848792|gb|EDL63014.1| ClpC [Bacillus sp. SG-1]
Length = 813
Score = 79.7 bits (195), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +S+AV R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHSRVIGQDEAVKAVSKAVRRARAGLKDPKRPIGS-------FVFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AESMFGDEESMIRIDM-SEYMEKHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 VVLLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNV 660
>gi|449929417|ref|ZP_21801556.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 3SN1]
gi|449164545|gb|EMB67597.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 3SN1]
Length = 813
Score = 79.7 bits (195), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGMRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|258512699|ref|YP_003186133.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257479425|gb|ACV59744.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 812
Score = 79.7 bits (195), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 13/167 (7%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L E+V QDEA+ +++A+ R R G + KR I FLGP VGK ++A ALAE
Sbjct: 505 LHERVIGQDEAVEAVAKAIRRARAGL-----KDPKRPIGSFIFLGPTGVGKTELARALAE 559
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI +D+ SE S + + G+ + ++ R KPYSVV
Sbjct: 560 ALFGDEDALIRIDM-SEYMERHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYSVV 613
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G+ TD GR V + + TS +
Sbjct: 614 LLDEIEK-AHPEVFNILLQVLDDGRLTDGKGRTVDFRNTVIIMTSNV 659
>gi|381190271|ref|ZP_09897794.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Thermus sp.
RL]
gi|380451864|gb|EIA39465.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Thermus sp.
RL]
Length = 736
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 679 DPRDYKTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDK 736
D D K +R+ L ++V Q+EAI ++ A+ R R+G +G ++ F+G
Sbjct: 432 DKDDEKLMRLEEELRKRVVGQEEAIRALANALRRARVG----LGGRTRVAASFLFVGQSG 487
Query: 737 VGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNI--DFCDCKLRGKVLVD 794
VGK ++A ALAE++FG++ LI D+S Q +P+SI + + G+
Sbjct: 488 VGKTQLAKALAEVLFGSERALIRFDMSEFQ---EPHSISKLIGAPPGYVGYEQGGR---- 540
Query: 795 YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ + R +P+SVV L++++K A P + ++ + + G+ TD GR V +I + TS
Sbjct: 541 -LTEAVRRQPFSVVLLDEIEK-AHPDIYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTS 597
>gi|325109333|ref|YP_004270401.1| ATPase AAA [Planctomyces brasiliensis DSM 5305]
gi|324969601|gb|ADY60379.1| ATPase AAA-2 domain protein [Planctomyces brasiliensis DSM 5305]
Length = 849
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 22/209 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKR--GIWLAFLGPDKVGKKKIASALA 747
L +V QDEAI +S+AV R R G + KR G++L F GP VGK +A LA
Sbjct: 517 LHRRVISQDEAIKQVSKAVRRSRSGL-----KDPKRPTGVFL-FAGPTGVGKTLLAKTLA 570
Query: 748 EIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSV 807
E +FG++ LI +D+S Q + + + + G+ + ++ R +PY+V
Sbjct: 571 EFMFGDEEALIQIDMSEYQEKHNISRLIGAPP-GYVGYEEGGQ-----LTEQIRRRPYAV 624
Query: 808 VFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTT 867
V L++++K A P V + L + + G TDS+GR V +I + T+ V +
Sbjct: 625 VLLDEIEK-AHPDVYNMLLQIMEEGHLTDSFGRKVDFKNVILIMTTN---AGAEVISNAS 680
Query: 868 PVKF----SEEIILGAKRWQMQTAISHGF 892
P F +EE G+ + ++++ + F
Sbjct: 681 PFGFFAAKNEEASYGSMKQEVRSVLQKTF 709
>gi|218290044|ref|ZP_03494211.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
gi|218239878|gb|EED07066.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
Length = 812
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 13/167 (7%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L E+V QDEA+ +++A+ R R G + KR I FLGP VGK ++A ALAE
Sbjct: 505 LHERVIGQDEAVEAVAKAIRRARAGL-----KDPKRPIGSFIFLGPTGVGKTELARALAE 559
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI +D+ SE S + + G+ + ++ R KPYSVV
Sbjct: 560 ALFGDEDALIRIDM-SEYMERHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYSVV 613
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G+ TD GR V + + TS +
Sbjct: 614 LLDEIEK-AHPEVFNILLQVLDDGRLTDGKGRTVDFRNTVIIMTSNV 659
>gi|441153256|ref|ZP_20966245.1| ATPase AAA [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440618490|gb|ELQ81560.1| ATPase AAA [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 830
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 109/234 (46%), Gaps = 27/234 (11%)
Query: 631 ANTPKLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPF------DPRDYK 684
A + ID ++ SG + E V+E T ++ + S TG P +
Sbjct: 465 AGLKRQIDETQERLSG-LDGERAPVAEVTEEDIAEVVSR---RTGIPVAQLTATERERLI 520
Query: 685 TLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIAS 744
L L +V QDEA+ ++QAV R R G G + G +L FLGP VGK ++A
Sbjct: 521 RLEETLHARVVGQDEAVTAVAQAVRRGRAGMG---DPDRPTGSFL-FLGPTGVGKTELAK 576
Query: 745 ALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFR 801
A+AEI+FG + +LI D+S Q + + G V D + + R
Sbjct: 577 AIAEILFGQEDRLIRFDMSEFQERHTVSRLVGSPP---------GYVGYDEAGQLTEAVR 627
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYSV+ ++++K A P V + L + + G+ TD+ GR V + + TS +
Sbjct: 628 RKPYSVLLFDEVEK-AHPDVFNLLLQVLDDGRLTDAQGRTVDFRHTVVIMTSNL 680
>gi|46198482|ref|YP_004149.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Thermus
thermophilus HB27]
gi|55980511|ref|YP_143808.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Thermus
thermophilus HB8]
gi|46196104|gb|AAS80522.1| ATP-dependent clp protease ATP-binding subunit clpA [Thermus
thermophilus HB27]
gi|55771924|dbj|BAD70365.1| ATP-dependent Clp protease, ATP-binding subunit (ClpA) [Thermus
thermophilus HB8]
Length = 736
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 679 DPRDYKTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDK 736
D D K +R+ L ++V Q+EAI ++ A+ R R+G +G ++ F+G
Sbjct: 432 DKDDEKLMRLEEELRKRVVGQEEAIRALANALRRARVG----LGGRTRVAASFLFVGQSG 487
Query: 737 VGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNI--DFCDCKLRGKVLVD 794
VGK ++A ALAE++FG++ LI D+S Q +P+SI + + G+
Sbjct: 488 VGKTQLAKALAEVLFGSERALIRFDMSEFQ---EPHSISKLIGAPPGYVGYEQGGR---- 540
Query: 795 YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ + R +P+SVV L++++K A P + ++ + + G+ TD GR V +I + TS
Sbjct: 541 -LTEAVRRQPFSVVLLDEIEK-AHPDIYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTS 597
>gi|336112769|ref|YP_004567536.1| ATPase AAA-2 domain-containing protein [Bacillus coagulans 2-6]
gi|335366199|gb|AEH52150.1| ATPase AAA-2 domain protein [Bacillus coagulans 2-6]
Length = 816
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 505 LHSRVIGQEEAVLAVAKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 557
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 558 AEAMFGDEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGFEEGGQ-----LTEKVRRKPYS 611
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V S I + TS +
Sbjct: 612 VVLLDEIEK-AHPDVFNILLQVLDDGRLTDSKGRTVDFSNTIVIMTSNV 659
>gi|384136760|ref|YP_005519474.1| ATPase [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|339290845|gb|AEJ44955.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 812
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 13/167 (7%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L E+V QDEA+ +++A+ R R G + KR I FLGP VGK ++A ALAE
Sbjct: 505 LHERVIGQDEAVEAVAKAIRRARAGL-----KDPKRPIGSFIFLGPTGVGKTELARALAE 559
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI +D+ SE S + + G+ + ++ R KPYSVV
Sbjct: 560 ALFGDEDALIRIDM-SEYMERHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYSVV 613
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G+ TD GR V + + TS +
Sbjct: 614 LLDEIEK-AHPEVFNILLQVLDDGRLTDGKGRTVDFRNTVIIMTSNV 659
>gi|306826516|ref|ZP_07459826.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
pyogenes ATCC 10782]
gi|304431303|gb|EFM34302.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
pyogenes ATCC 10782]
Length = 814
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD A+ +S+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQDAAVTAVSRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDEAALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + Q+ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTQKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGILTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|386360953|ref|YP_006059198.1| chaperone ATPase [Thermus thermophilus JL-18]
gi|383509980|gb|AFH39412.1| ATPase with chaperone activity, ATP-binding subunit [Thermus
thermophilus JL-18]
Length = 736
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 679 DPRDYKTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDK 736
D D K +R+ L ++V Q+EAI ++ A+ R R+G +G ++ F+G
Sbjct: 432 DKDDEKLMRLEEELRKRVVGQEEAIRALANALRRARVG----LGGRTRVAASFLFVGQSG 487
Query: 737 VGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNI--DFCDCKLRGKVLVD 794
VGK ++A ALAE++FG++ LI D+S Q +P+SI + + G+
Sbjct: 488 VGKTQLAKALAEVLFGSERALIRFDMSEFQ---EPHSISKLIGAPPGYVGYEQGGR---- 540
Query: 795 YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ + R +P+SVV L++++K A P + ++ + + G+ TD GR V +I + TS
Sbjct: 541 -LTEAVRRQPFSVVLLDEIEK-AHPDIYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTS 597
>gi|347751623|ref|YP_004859188.1| ATPase AAA [Bacillus coagulans 36D1]
gi|347584141|gb|AEP00408.1| ATPase AAA-2 domain protein [Bacillus coagulans 36D1]
Length = 816
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 505 LHSRVIGQEEAVLAVAKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 557
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 558 AEAMFGDEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGFEEGGQ-----LTEKVRRKPYS 611
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V S I + TS +
Sbjct: 612 VVLLDEIEK-AHPDVFNILLQVLDDGRLTDSKGRTVDFSNTIVIMTSNV 659
>gi|384430734|ref|YP_005640094.1| ATPase [Thermus thermophilus SG0.5JP17-16]
gi|333966202|gb|AEG32967.1| ATPase AAA-2 domain protein [Thermus thermophilus SG0.5JP17-16]
Length = 736
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 679 DPRDYKTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDK 736
D D K +R+ L ++V Q+EAI ++ A+ R R+G +G ++ F+G
Sbjct: 432 DKDDEKLMRLEEELRKRVVGQEEAIRALANALRRARVG----LGGRTRVAASFLFVGQSG 487
Query: 737 VGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNI--DFCDCKLRGKVLVD 794
VGK ++A ALAE++FG++ LI D+S Q +P+SI + + G+
Sbjct: 488 VGKTQLAKALAEVLFGSERALIRFDMSEFQ---EPHSISKLIGAPPGYVGYEQGGR---- 540
Query: 795 YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ + R +P+SVV L++++K A P + ++ + + G+ TD GR V +I + TS
Sbjct: 541 -LTEAVRRQPFSVVLLDEIEK-AHPDIYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTS 597
>gi|227872597|ref|ZP_03990933.1| ATPase with chaperone activity, ATP-binding subunit [Oribacterium
sinus F0268]
gi|227841598|gb|EEJ51892.1| ATPase with chaperone activity, ATP-binding subunit [Oribacterium
sinus F0268]
Length = 827
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 23/184 (12%)
Query: 676 EPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFL 732
E + K L L E+V Q+EA+ ++QA+ R R+G R +GS FL
Sbjct: 499 EETETERLKNLENLLHERVIGQNEAVKAVAQAIKRGRVGLKDPKRPIGS-------FMFL 551
Query: 733 GPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVL 792
GP VGK +++ A+AE++FG++ LI VD+S + + G V
Sbjct: 552 GPTGVGKTELSKAIAEVIFGSEQNLIRVDMSEYMEKYSVSKMIGSPP---------GYVG 602
Query: 793 VD---YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIF 849
D + ++ R PYSV+ ++++K A P V + L + + G TDS GR VS I
Sbjct: 603 YDEGGQLSEKVRRNPYSVILFDEIEK-AHPDVLNILLQVLDDGHITDSQGRKVSFKNTII 661
Query: 850 VATS 853
+ TS
Sbjct: 662 IMTS 665
>gi|392988260|ref|YP_006486853.1| ATP-dependent Clp protease, ATP-binding protein ClpC [Enterococcus
hirae ATCC 9790]
gi|392335680|gb|AFM69962.1| ATP-dependent Clp protease, ATP-binding protein ClpC [Enterococcus
hirae ATCC 9790]
Length = 826
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 19/167 (11%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL+E+
Sbjct: 520 RVVGQDEAVKAVSRAIRRARSGLKDPNRPIGS-------FMFLGPTGVGKTELAKALSEV 572
Query: 750 VFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI VD+S ++ S I D G L + I R KPYSV+
Sbjct: 573 MFGDENSLIRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RQKPYSVI 625
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G TDS GR V I + TS I
Sbjct: 626 LLDEVEK-AHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 671
>gi|289767057|ref|ZP_06526435.1| chaperone [Streptomyces lividans TK24]
gi|289697256|gb|EFD64685.1| chaperone [Streptomyces lividans TK24]
Length = 837
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 19/173 (10%)
Query: 693 KVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
++ QDEA+ +S+AV R R G G R VGS FLGP VGK ++A LAE+
Sbjct: 537 RIVGQDEAVTAVSRAVRRNRAGMGDPDRPVGS-------FLFLGPTGVGKTELAKTLAEL 589
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG + ++I D+S Q + + + G+ + ++ R +PYSVV
Sbjct: 590 LFGEENRMIRFDMSEFQEKHTVARLVGAPP-GYVGYEEAGQ-----LTEKVRRQPYSVVL 643
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
++++K A P V ++L + + G+ TD GR V + + TS I G H +
Sbjct: 644 FDEVEK-AHPDVFNTLLQILDDGRLTDGQGRTVDFRHCVVIMTSNI--GAHRI 693
>gi|21225789|ref|NP_631568.1| chaperone [Streptomyces coelicolor A3(2)]
gi|14495033|emb|CAC42150.1| putative chaperone [Streptomyces coelicolor A3(2)]
Length = 837
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 19/173 (10%)
Query: 693 KVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
++ QDEA+ +S+AV R R G G R VGS FLGP VGK ++A LAE+
Sbjct: 537 RIVGQDEAVTAVSRAVRRNRAGMGDPDRPVGS-------FLFLGPTGVGKTELAKTLAEL 589
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG + ++I D+S Q + + + G+ + ++ R +PYSVV
Sbjct: 590 LFGEENRMIRFDMSEFQEKHTVARLVGAPP-GYVGYEEAGQ-----LTEKVRRQPYSVVL 643
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
++++K A P V ++L + + G+ TD GR V + + TS I G H +
Sbjct: 644 FDEVEK-AHPDVFNTLLQILDDGRLTDGQGRTVDFRHCVVIMTSNI--GAHRI 693
>gi|302872270|ref|YP_003840906.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575129|gb|ADL42920.1| ATPase AAA-2 domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 829
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +++A+ R R+G R +GS FLGP VGK ++A AL
Sbjct: 513 LHRRVVGQDEAVKAVARAIRRGRVGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 565
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG + +I +D +S+ F+ + G + ++ R +PYS
Sbjct: 566 AEALFGTEDAMIRID------MSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYS 619
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P V + L + + G+ TDS GR VS + + TS I
Sbjct: 620 VVLFDEIEK-AHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|291550515|emb|CBL26777.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
torques L2-14]
Length = 814
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 89/186 (47%), Gaps = 33/186 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + K L L ++V QDEA+ +++AV R R+G R +GS FLGP
Sbjct: 499 DAQRLKNLENVLQKRVIGQDEAVGAVARAVKRGRVGLKDPKRPIGS-------FLFLGPT 551
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVS--------SEQRVSQPNSIFDCQNIDFCDCKL 787
VGK +++ ALAE +FG + +I VD+S S+ S P + + D
Sbjct: 552 GVGKTELSKALAEALFGKEDAMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQLSD--- 608
Query: 788 RGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
+ R+ PYSV+ ++++K A P V + L + + G TDS GR V S
Sbjct: 609 -----------QVRTHPYSVILFDEIEK-AHPDVFNVLLQVLDDGHITDSQGRKVDFSNT 656
Query: 848 IFVATS 853
+ + TS
Sbjct: 657 VIIMTS 662
>gi|22537967|ref|NP_688818.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
agalactiae 2603V/R]
gi|25011908|ref|NP_736303.1| hypothetical protein gbs1869 [Streptococcus agalactiae NEM316]
gi|76797865|ref|ZP_00780128.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
agalactiae 18RS21]
gi|77414265|ref|ZP_00790425.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
agalactiae 515]
gi|22534867|gb|AAN00691.1|AE014274_21 ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
agalactiae 2603V/R]
gi|24413450|emb|CAD47528.1| Unknown [Streptococcus agalactiae NEM316]
gi|76586768|gb|EAO63263.1| ATP-dependent Clp proteinase, ATP-binding chain [Streptococcus
agalactiae 18RS21]
gi|77159681|gb|EAO70832.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
agalactiae 515]
Length = 815
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 25/254 (9%)
Query: 612 ASVTTDLGLGKIYPSTRQEANTPKLIDNKEQCFSGSISAEFD-------AVSEGTFHNVV 664
AS T + + K PS E + ++D+ + S ++ A + AV+E +
Sbjct: 429 ASATVQMMIKKNAPSLLTEVDQA-ILDDDMKSASKALKASYKGKKRKPIAVTEDHIMATL 487
Query: 665 QSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGS 721
S D + Y L L ++V QD+A+ IS+A+ R + G R +GS
Sbjct: 488 SRLSGIPVEKLTQADSKKYLNLEKELHKRVIGQDDAVTAISRAIRRNQSGIRTGKRPIGS 547
Query: 722 NSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNID 781
FLGP VGK ++A ALAE++F ++ LI D +S+ F +++
Sbjct: 548 -------FMFLGPTGVGKTELAKALAEVLFDDESALIRFD------MSEYMEKFAASHLN 594
Query: 782 FCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRD 841
G + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR
Sbjct: 595 GAPPGYVGYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRK 653
Query: 842 VSISGMIFVATSTI 855
V S I + TS +
Sbjct: 654 VDFSNTIIIMTSNL 667
>gi|451817033|ref|YP_007453234.1| chaperone protein ClpB [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451783012|gb|AGF53980.1| chaperone protein ClpB [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 823
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 99/186 (53%), Gaps = 20/186 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ +I++AV R R+G R +GS FLGP VGK +++ AL
Sbjct: 510 LHKRVIGQNEAVKSIARAVRRARVGIKDPNRPIGS-------FIFLGPTGVGKTELSKAL 562
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I VD+S E S + + + G+ + + R KPYS
Sbjct: 563 AEAMFGDENSIIRVDMS-EYMESHSVARLIGSPPGYVGYEEGGQ-----LTEAVRRKPYS 616
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
+V L++++KA +P V + L + + G+ TD G+ V+ I + TS + G H + Q
Sbjct: 617 IVLLDEIEKA-NPEVFNILLQIMEDGRLTDGKGKVVNFKNTIIIMTSNV--GAHQIKKQK 673
Query: 867 TPVKFS 872
+ + FS
Sbjct: 674 S-IGFS 678
>gi|403743591|ref|ZP_10953143.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122621|gb|EJY56826.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus hesperidum
URH17-3-68]
Length = 810
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 13/167 (7%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L E+V QDEA+ +S+A+ R R G + KR I FLGP VGK ++A ALAE
Sbjct: 504 LHERVIGQDEAVQAVSRAIRRARAGL-----KDPKRPIGSFIFLGPTGVGKTELARALAE 558
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI +D+ SE S + + G+ + ++ R KPYSVV
Sbjct: 559 SMFGDEDALIRIDM-SEFMERHTTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYSVV 612
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G+ TD GR V + + TS +
Sbjct: 613 LLDEIEK-AHPEVFNILLQVLDDGRLTDGKGRTVDFRNTVIIMTSNV 658
>gi|158319507|ref|YP_001512014.1| ATPase [Alkaliphilus oremlandii OhILAs]
gi|158139706|gb|ABW18018.1| ATPase AAA-2 domain protein [Alkaliphilus oremlandii OhILAs]
Length = 813
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 25/182 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +I++A+ R R+G R +GS FLGP VGK +++ AL
Sbjct: 507 LHNRVIGQEEAVKSIARAIRRARVGLKDPKRPIGS-------FIFLGPTGVGKTELSKAL 559
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE +FGN+ +I +D+S + + G V D + ++ R K
Sbjct: 560 AESMFGNEDDMIRIDMS---------EYMEKHTVSRLIGSPPGYVGFDEGGQLTEKVRRK 610
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVH 863
PYSVV ++++K A P V + L + + G+ TD+ GR V + + TS + G H++
Sbjct: 611 PYSVVLFDEIEK-AHPDVFNILLQILDDGRLTDAQGRTVDFKNTVIIMTSNV--GAHTIK 667
Query: 864 PQ 865
Q
Sbjct: 668 KQ 669
>gi|390456410|ref|ZP_10241938.1| ATPase AAA [Paenibacillus peoriae KCTC 3763]
Length = 814
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 19/181 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHERVIGQDEAVKAVSRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AESMFGDENAVIRIDM-SEYMEKHSTSRLVGAPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
VV L++++K A P V + L + + G+ TDS GR V + + TS + G ++ +
Sbjct: 613 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNV--GAQAIKRNS 669
Query: 867 T 867
T
Sbjct: 670 T 670
>gi|387786958|ref|YP_006252054.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans LJ23]
gi|449886455|ref|ZP_21786204.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans SA41]
gi|449942818|ref|ZP_21806200.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 11A1]
gi|450040895|ref|ZP_21837093.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans T4]
gi|450077117|ref|ZP_21850217.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans N3209]
gi|379133359|dbj|BAL70111.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans LJ23]
gi|449149881|gb|EMB53663.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 11A1]
gi|449198346|gb|EMB99463.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans T4]
gi|449211528|gb|EMC11929.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans N3209]
gi|449254219|gb|EMC52139.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans SA41]
Length = 813
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|312793061|ref|YP_004025984.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180201|gb|ADQ40371.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 829
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +++A+ R R+G R +GS FLGP VGK ++A AL
Sbjct: 513 LHRRVVGQDEAVKAVARAIRRGRVGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 565
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG + +I +D +S+ F+ + G + ++ R +PYS
Sbjct: 566 AEALFGTEDAMIRID------MSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYS 619
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P V + L + + G+ TDS GR VS + + TS I
Sbjct: 620 VVLFDEIEK-AHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|398813140|ref|ZP_10571842.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. BC25]
gi|398039301|gb|EJL32439.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. BC25]
Length = 816
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 23/183 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +IS+A+ R R G R +GS FLGP VGK ++A A+
Sbjct: 511 LHDRVIGQDEAVKSISRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAV 563
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKP 804
AE +FG++ +I VD+S + + F + + ++ R KP
Sbjct: 564 AETLFGDEDAMIRVDMSEYMEKHSTARLVGAPPGYVGFDEG--------GQLTEKVRRKP 615
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHP 864
YSV+ L++++K A P V + L + + G+ TDS GR V + + TS + G + +
Sbjct: 616 YSVILLDEIEK-AHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSNV--GANMIKK 672
Query: 865 QTT 867
TT
Sbjct: 673 NTT 675
>gi|410727947|ref|ZP_11366140.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
sp. Maddingley MBC34-26]
gi|410597507|gb|EKQ52118.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
sp. Maddingley MBC34-26]
Length = 823
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 96/181 (53%), Gaps = 19/181 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ +I++AV R R+G R +GS FLGP VGK +++ AL
Sbjct: 510 LHKRVVGQNEAVKSIARAVRRARVGIKDPNRPIGS-------FIFLGPTGVGKTELSKAL 562
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S S + + G+ + + R KPYS
Sbjct: 563 AEAMFGDENSIIRIDM-SEYMESHSVSRLIGSPPGYVGHEEGGQ-----LTEAVRRKPYS 616
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
+V L++++K A+P V + L + + G+ TD G+ V+ I + TS + G H + Q
Sbjct: 617 IVLLDEIEK-ANPEVFNILLQIMEDGRLTDGKGKVVNFKNTIIIMTSNV--GAHQIKKQK 673
Query: 867 T 867
+
Sbjct: 674 S 674
>gi|312621967|ref|YP_004023580.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202434|gb|ADQ45761.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kronotskyensis
2002]
Length = 829
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +++A+ R R+G R +GS FLGP VGK ++A AL
Sbjct: 513 LHRRVVGQDEAVKAVARAIRRGRVGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 565
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG + +I +D +S+ F+ + G + ++ R +PYS
Sbjct: 566 AEALFGTEDAMIRID------MSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYS 619
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P V + L + + G+ TDS GR VS + + TS I
Sbjct: 620 VVLFDEIEK-AHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|222529809|ref|YP_002573691.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222456656|gb|ACM60918.1| ATPase AAA-2 domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 829
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +++A+ R R+G R +GS FLGP VGK ++A AL
Sbjct: 513 LHRRVVGQDEAVKAVARAIRRGRVGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 565
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG + +I +D +S+ F+ + G + ++ R +PYS
Sbjct: 566 AEALFGTEDAMIRID------MSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYS 619
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P V + L + + G+ TDS GR VS + + TS I
Sbjct: 620 VVLFDEIEK-AHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|449965909|ref|ZP_21812096.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 15VF2]
gi|449170730|gb|EMB73425.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 15VF2]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|449874693|ref|ZP_21781839.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans S1B]
gi|449254656|gb|EMC52556.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans S1B]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|24380371|ref|NP_722326.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans UA159]
gi|449864630|ref|ZP_21778488.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans U2B]
gi|449869525|ref|ZP_21780172.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 8ID3]
gi|449896322|ref|ZP_21789615.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans R221]
gi|449983785|ref|ZP_21818656.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NFSM2]
gi|450081082|ref|ZP_21851487.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans N66]
gi|24378391|gb|AAN59632.1|AE015025_4 class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans UA159]
gi|449158238|gb|EMB61660.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 8ID3]
gi|449181041|gb|EMB83173.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NFSM2]
gi|449215559|gb|EMC15741.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans N66]
gi|449262505|gb|EMC59954.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans R221]
gi|449264701|gb|EMC62036.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans U2B]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|450072748|ref|ZP_21848751.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans M2A]
gi|449210820|gb|EMC11251.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans M2A]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|449914291|ref|ZP_21795531.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 15JP3]
gi|450047689|ref|ZP_21839550.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans N34]
gi|450159632|ref|ZP_21879563.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 66-2A]
gi|449158284|gb|EMB61704.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 15JP3]
gi|449197384|gb|EMB98561.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans N34]
gi|449241040|gb|EMC39687.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 66-2A]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|312111885|ref|YP_003990201.1| ATPase AAA [Geobacillus sp. Y4.1MC1]
gi|311216986|gb|ADP75590.1| ATPase AAA-2 domain protein [Geobacillus sp. Y4.1MC1]
Length = 720
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA+KV Q+EA+ +++A+ R R G R VGS F+GP VGK
Sbjct: 418 KHLEENLAKKVIGQEEAVKKVAKAIRRSRAGLKAKHRPVGS-------FLFVGPTGVGKT 470
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++A LAE +FG+K +I +D+S + + + + G+ + ++
Sbjct: 471 ELAKTLAEELFGSKDAMIRLDMSEYMEKHSVSKLIGSPP-GYVGFEEAGQ-----LTEKV 524
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
R PYS++ L++++K A P VQ + + G+ TDS GR VS + +ATS
Sbjct: 525 RRNPYSIILLDEIEK-AHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATSN 577
>gi|89099328|ref|ZP_01172205.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
sp. NRRL B-14911]
gi|89085937|gb|EAR65061.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
sp. NRRL B-14911]
Length = 708
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 17/182 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L +L+EKV Q+EA+ +++AV R R G R +GS F+GP VGK
Sbjct: 411 KNLEKSLSEKVIGQEEAVKKVAKAVRRSRAGLKSKNRPIGS-------FLFVGPTGVGKT 463
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++ LAE +FG+K +I +D+S + +SI I G + ++
Sbjct: 464 ELTKTLAEELFGSKDSMIRLDMSE---YMEKHSI---SKIIGSPPGYVGHDEAGQLTEKV 517
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKH 860
R PYS++ L++++K A P VQ + + G+ TDS GR VS + + TS G
Sbjct: 518 RRNPYSIILLDEIEK-AHPDVQHMFLQILEDGRLTDSQGRTVSFKDSVIIMTSNAGAGHR 576
Query: 861 SV 862
+
Sbjct: 577 EI 578
>gi|450180185|ref|ZP_21887077.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 24]
gi|449248465|gb|EMC46708.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 24]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|449936051|ref|ZP_21803776.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 2ST1]
gi|450155221|ref|ZP_21878142.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 21]
gi|449165907|gb|EMB68873.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 2ST1]
gi|449237328|gb|EMC36185.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 21]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 94/181 (51%), Gaps = 19/181 (10%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD 794
VGK ++A ALAE++F ++ LI D+ SE S + + K G+
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDM-SEYMEKFAASRLNGAPPGYVGYKEGGE---- 608
Query: 795 YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
+ ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I + TS
Sbjct: 609 -LTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTIIIMTSN 666
Query: 855 I 855
+
Sbjct: 667 L 667
>gi|406909140|gb|EKD49459.1| hypothetical protein ACD_63C00138G0006, partial [uncultured
bacterium]
Length = 870
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 91/176 (51%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 555 LHARVIGQNEAVQAVAEAVRRGRAGLKDPNRPIGS-------FIFLGPTGVGKTELARAL 607
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE VFGN+ +I VD+S + +S+ KL G V Y + ++
Sbjct: 608 AEQVFGNEDTIIRVDMSE---YMEQHSV----------AKLTGSPPGYVGYEEGGQLTEK 654
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSV+ L++++K A P V + L + + G+ TD+ GR V I +ATS I
Sbjct: 655 VRRKPYSVILLDEIEK-AHPDVFNILLQILDDGRLTDAKGRAVDFKNTIIIATSNI 709
>gi|319654839|ref|ZP_08008914.1| class III stress response-like ATPase [Bacillus sp. 2_A_57_CT2]
gi|317393402|gb|EFV74165.1| class III stress response-like ATPase [Bacillus sp. 2_A_57_CT2]
Length = 816
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ IS+AV R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHSRVIGQEEAVKAISKAVRRARAGLKDPKRPIGS-------FVFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AEAMFGDEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 VVLLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNV 660
>gi|449920482|ref|ZP_21798499.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 1SM1]
gi|449158766|gb|EMB62174.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 1SM1]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|89100727|ref|ZP_01173582.1| class III stress response-related ATPase [Bacillus sp. NRRL
B-14911]
gi|89084544|gb|EAR63690.1| class III stress response-related ATPase [Bacillus sp. NRRL
B-14911]
Length = 817
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ IS+AV R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHSRVIGQEEAVKAISKAVRRARAGLKDPKRPIGS-------FVFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AEAMFGDEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 VVLLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNV 660
>gi|449883413|ref|ZP_21785167.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans SA38]
gi|449249862|gb|EMC47956.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans SA38]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|450120939|ref|ZP_21866020.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans ST6]
gi|449229711|gb|EMC29010.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans ST6]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|449976596|ref|ZP_21816287.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 11VS1]
gi|449175398|gb|EMB77812.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 11VS1]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|449956074|ref|ZP_21809391.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 4VF1]
gi|450140054|ref|ZP_21872764.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NLML1]
gi|449170801|gb|EMB73494.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 4VF1]
gi|449232242|gb|EMC31367.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NLML1]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|397650567|ref|YP_006491094.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans GS-5]
gi|449989105|ref|ZP_21820916.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NVAB]
gi|449994828|ref|ZP_21822755.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans A9]
gi|450010927|ref|ZP_21828889.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans A19]
gi|450023612|ref|ZP_21830727.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans U138]
gi|450097242|ref|ZP_21857379.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans SF1]
gi|392604136|gb|AFM82300.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans GS-5]
gi|449182954|gb|EMB84955.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NVAB]
gi|449184988|gb|EMB86897.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans A9]
gi|449189914|gb|EMB91534.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans A19]
gi|449193219|gb|EMB94610.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans U138]
gi|449222925|gb|EMC22637.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans SF1]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|290581293|ref|YP_003485685.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans NN2025]
gi|450068301|ref|ZP_21847112.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans NLML9]
gi|254998192|dbj|BAH88793.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans NN2025]
gi|449207296|gb|EMC07974.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans NLML9]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|325297762|ref|YP_004257679.1| ATPase AAA-2 domain-containing protein [Bacteroides salanitronis
DSM 18170]
gi|324317315|gb|ADY35206.1| ATPase AAA-2 domain protein [Bacteroides salanitronis DSM 18170]
Length = 847
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 25/177 (14%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASA 745
++ L KV QD+A+ T+ +A+ R RIG N G +L FLGP VGK +A
Sbjct: 538 MKDVLLSKVIAQDKAVETLVKAIQRSRIGLK---DPNKPIGTFL-FLGPTGVGKTHLAKE 593
Query: 746 LAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQ 798
LA+ +FG+ LI +D+S F +L G V Y + +
Sbjct: 594 LAKEMFGSSDALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTE 640
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ R KPYS+V L++++K A P V + L + + G+ TDSYGR V I + TS I
Sbjct: 641 KVRRKPYSIVLLDEIEK-AHPDVFNLLLQVMDEGRLTDSYGRTVDFKNTIIIMTSNI 696
>gi|312127146|ref|YP_003992020.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777165|gb|ADQ06651.1| ATPase AAA-2 domain protein [Caldicellulosiruptor hydrothermalis
108]
Length = 829
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +++A+ R R+G R +GS FLGP VGK ++A AL
Sbjct: 513 LHRRVVGQDEAVKAVARAIRRGRVGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 565
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG + +I +D +S+ F+ + G + ++ R +PYS
Sbjct: 566 AEALFGTEDAMIRID------MSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYS 619
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P V + L + + G+ TDS GR VS + + TS I
Sbjct: 620 VVLFDEIEK-AHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|449893140|ref|ZP_21788567.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans SF12]
gi|449256059|gb|EMC53894.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans SF12]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|450170047|ref|ZP_21883323.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans SM4]
gi|449246339|gb|EMC44647.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans SM4]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|450034358|ref|ZP_21834313.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans M21]
gi|449196461|gb|EMB97726.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans M21]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|449969249|ref|ZP_21813124.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans 2VS1]
gi|450030599|ref|ZP_21833290.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans G123]
gi|450058872|ref|ZP_21843235.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans NLML4]
gi|450092605|ref|ZP_21856110.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans W6]
gi|450149137|ref|ZP_21875975.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans 14D]
gi|450163948|ref|ZP_21881019.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans B]
gi|449174369|gb|EMB76863.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans 2VS1]
gi|449192551|gb|EMB93966.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans G123]
gi|449203527|gb|EMC04384.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans NLML4]
gi|449218158|gb|EMC18180.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans W6]
gi|449234860|gb|EMC33846.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans 14D]
gi|449242405|gb|EMC40991.1| class III stress response-related ATP-dependent Clp protease
ATP-binding subunit [Streptococcus mutans B]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|55822067|ref|YP_140508.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
thermophilus CNRZ1066]
gi|55738052|gb|AAV61693.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
thermophilus CNRZ1066]
Length = 816
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 505 DSKRYLNLESELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 557
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LV 793
VGK ++A ALAE++F ++ L+ D+S F +L G V
Sbjct: 558 GVGKTELAKALAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 604
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 605 GYDEGGELTEKVRNKPYSVLLFDEIEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTI 663
Query: 849 FVATSTI 855
+ TS +
Sbjct: 664 IIMTSNL 670
>gi|55820179|ref|YP_138621.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
thermophilus LMG 18311]
gi|55736164|gb|AAV59806.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
thermophilus LMG 18311]
Length = 816
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 505 DSKRYLNLESELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 557
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LV 793
VGK ++A ALAE++F ++ L+ D+S F +L G V
Sbjct: 558 GVGKTELAKALAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 604
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 605 GYDEGGELTEKVRNKPYSVLLFDEIEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTI 663
Query: 849 FVATSTI 855
+ TS +
Sbjct: 664 IIMTSNL 670
>gi|339441066|ref|YP_004707071.1| chaperone ATPase [Clostridium sp. SY8519]
gi|338900467|dbj|BAK45969.1| ATPase with chaperone activity [Clostridium sp. SY8519]
Length = 836
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 31/174 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EAI +S+AV R R+G GR +GS FLGP VGK +I+ AL
Sbjct: 524 LHRRVIAQEEAIRAVSRAVRRGRVGLKDPGRPIGS-------FLFLGPTGVGKTEISKAL 576
Query: 747 AEIVFGNKGKLIHVDVSS-------EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQE 799
AE VFG++ +I VD+S + + P + G L D +
Sbjct: 577 AEAVFGSEDAMIRVDMSEYMEKHSVSKMIGSPPGYVGYEE---------GGQLSDKV--- 624
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
R+ PYSV+ ++++K A P V + L + + G TD++GR + I + TS
Sbjct: 625 -RTHPYSVILFDEIEK-AHPDVFNILLQVLDDGHITDAHGRKIDFKNTIIIMTS 676
>gi|344996728|ref|YP_004799071.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964947|gb|AEM74094.1| ATPase AAA-2 domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 829
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +++A+ R R+G R +GS FLGP VGK ++A AL
Sbjct: 513 LHRRVVGQDEAVKAVARAIRRGRVGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 565
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG + +I +D +S+ F+ + G + ++ R +PYS
Sbjct: 566 AEALFGTEDAMIRID------MSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYS 619
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P V + L + + G+ TDS GR VS + + TS I
Sbjct: 620 VVLFDEIEK-AHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|449904346|ref|ZP_21792647.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans M230]
gi|449259489|gb|EMC57015.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans M230]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|15896437|ref|NP_349786.1| ABC transporter ATPase [Clostridium acetobutylicum ATCC 824]
gi|337738395|ref|YP_004637842.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
gi|384459905|ref|YP_005672325.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium acetobutylicum EA 2018]
gi|15026259|gb|AAK81126.1|AE007814_4 ATPases with chaperone activity clpC, two ATP-binding domain
[Clostridium acetobutylicum ATCC 824]
gi|325510594|gb|ADZ22230.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium acetobutylicum EA 2018]
gi|336293592|gb|AEI34726.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 25/184 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ +S+AV R R+G R +GS FLGP VGK +++ AL
Sbjct: 510 LHKRVIGQEEAVEYVSRAVRRARVGLKDPKRPIGS-------FIFLGPTGVGKTELSKAL 562
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE +FG++ +I +D+S + + G V D + ++ R K
Sbjct: 563 AEAMFGDENNIIRIDMS---------EYMEKHTVSRLVGSPPGYVGYDEGGQLTEKVRRK 613
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVH 863
PYSVV ++++K A P V + L + + G+ TDS G+ VS + I + TS + G ++
Sbjct: 614 PYSVVLFDEIEK-AHPDVFNILLQILDDGRLTDSKGKTVSFTNTIIIMTSNV--GASTIR 670
Query: 864 PQTT 867
Q T
Sbjct: 671 KQKT 674
>gi|450050695|ref|ZP_21840408.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NFSM1]
gi|449202417|gb|EMC03335.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NFSM1]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|449908503|ref|ZP_21793770.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans OMZ175]
gi|449262917|gb|EMC60355.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans OMZ175]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|212639968|ref|YP_002316488.1| Class III stress response-related ATPase [Anoxybacillus
flavithermus WK1]
gi|212561448|gb|ACJ34503.1| Class III stress response-related ATPase [Anoxybacillus
flavithermus WK1]
Length = 860
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 95/184 (51%), Gaps = 21/184 (11%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIGN---GRDVGSNSKRGIWLAFLGPDKVG 738
K LR++ L E+V QDEA+ +S AV R R G R +GS FLGP VG
Sbjct: 558 KLLRLSHILHERVIGQDEAVELVSDAVLRARAGMKDPNRPIGS-------FLFLGPTGVG 610
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K ++A ALAE +F ++ ++I +D+S + + + + G+ + +
Sbjct: 611 KTELAKALAEALFDSEQQMIRIDMSEYMEKHAVSRLIGAPP-GYVGYEEGGQ-----LTE 664
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R KPYSV+ L++++K A P V + L + + G+ TDS GR V + + TS I G
Sbjct: 665 AVRRKPYSVILLDEIEK-AHPEVFNILLQMLDDGRMTDSQGRTVDFKNTVVIMTSNI--G 721
Query: 859 KHSV 862
H++
Sbjct: 722 SHTL 725
>gi|386712438|ref|YP_006178760.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
halophilus DSM 2266]
gi|384071993|emb|CCG43483.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
halophilus DSM 2266]
Length = 819
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 17/173 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L +V QDEA+ +IS+A+ R R G R +GS FLGP VGK ++
Sbjct: 509 LEDTLHNRVIGQDEAVKSISKAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTEL 561
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A ALAE +FG + +I +D+ SE S + + G+ + ++ R+
Sbjct: 562 ARALAESMFGEEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRN 615
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYSVV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 616 KPYSVVLLDEVEK-AHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVLIMTSNV 667
>gi|386343684|ref|YP_006039848.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
thermophilus JIM 8232]
gi|339277145|emb|CCC18893.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
thermophilus JIM 8232]
Length = 809
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 498 DSKRYLNLESELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LV 793
VGK ++A ALAE++F ++ L+ D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 598 GYDEGGELTEKVRNKPYSVLLFDEIEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|393198912|ref|YP_006460754.1| chaperone ATPase [Solibacillus silvestris StLB046]
gi|327438243|dbj|BAK14608.1| ATPase with chaperone activity, ATP-binding subunit [Solibacillus
silvestris StLB046]
Length = 814
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 21/171 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q EA+ IS+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 508 LHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 560
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKP 804
AE++FG++ +I VD+S + + + F D + ++ R KP
Sbjct: 561 AEVMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGFDDG--------GQLTEKVRRKP 612
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
YSVV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 YSVVLLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNV 662
>gi|450002127|ref|ZP_21825912.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans N29]
gi|449183664|gb|EMB85641.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans N29]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|406666957|ref|ZP_11074720.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
isronensis B3W22]
gi|405385240|gb|EKB44676.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
isronensis B3W22]
Length = 814
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 21/171 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q EA+ IS+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 508 LHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 560
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKP 804
AE++FG++ +I VD+S + + + F D + ++ R KP
Sbjct: 561 AEVMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGFDDG--------GQLTEKVRRKP 612
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
YSVV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 YSVVLLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNV 662
>gi|450174740|ref|ZP_21884771.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans SM1]
gi|449248196|gb|EMC46457.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans SM1]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|449980278|ref|ZP_21817111.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 5SM3]
gi|449177193|gb|EMB79506.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 5SM3]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|449946821|ref|ZP_21807064.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 11SSST2]
gi|450006225|ref|ZP_21827103.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NMT4863]
gi|450116183|ref|ZP_21864339.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans ST1]
gi|449169371|gb|EMB72148.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 11SSST2]
gi|449187788|gb|EMB89544.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NMT4863]
gi|449227206|gb|EMC26644.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans ST1]
Length = 813
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|375094252|ref|ZP_09740517.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora marina XMU15]
gi|374654985|gb|EHR49818.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora marina XMU15]
Length = 843
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 11/163 (6%)
Query: 693 KVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFG 752
+V QD+A+ +S+AV R R G N G +L FLGP VGK ++A ALAE +FG
Sbjct: 539 RVVGQDDAVAAVSEAVRRTRAGLAE---PNRPSGSFL-FLGPTGVGKTELARALAEALFG 594
Query: 753 NKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLED 812
++ ++I +D+S + + + + G+ + + R +PYSV+ L++
Sbjct: 595 SEDRMIRLDMSEYGERHTVSRLVGAPP-GYVGYEEAGQ-----LTEAVRRRPYSVILLDE 648
Query: 813 LDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++K A P V + L + + G+ TD GR V+ + + + TS +
Sbjct: 649 IEK-AHPDVFNMLLQVLDDGRLTDGRGRTVNFTNTVLIMTSNV 690
>gi|373106264|ref|ZP_09520567.1| hypothetical protein HMPREF9623_00231 [Stomatobaculum longum]
gi|371652639|gb|EHO18047.1| hypothetical protein HMPREF9623_00231 [Stomatobaculum longum]
Length = 839
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L L E+V QDEA+ +S+A+ R R+G R +GS FLGP VGK
Sbjct: 509 KKLESVLHERVIGQDEAVSAVSRAIRRGRVGLKDPHRPIGS-------FLFLGPTGVGKT 561
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
+++ ALAE +FG + LI VD+S + I + + G+ + ++
Sbjct: 562 ELSKALAEAMFGTEQALIRVDMSEYMEKHSVSKIVGSPP-GYVGYEEGGQ-----LSEKV 615
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
R PYSV+ ++++K A P V + L + + G TDS GR + + + TS
Sbjct: 616 RRNPYSVILFDEIEK-AHPDVFNILLQVLDDGHITDSQGRKIDFKNTVLIMTS 667
>gi|299541899|ref|ZP_07052222.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZC1]
gi|424739339|ref|ZP_18167758.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZB2]
gi|298725637|gb|EFI66278.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZC1]
gi|422946736|gb|EKU41142.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
fusiformis ZB2]
Length = 814
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 21/171 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q EA+ IS+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 507 LHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 559
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKP 804
AE++FG++ +I VD+S + + + F D + ++ R KP
Sbjct: 560 AEVMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGFDDG--------GQLTEKVRRKP 611
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
YSVV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 612 YSVVLLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNV 661
>gi|374603227|ref|ZP_09676209.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
dendritiformis C454]
gi|374391096|gb|EHQ62436.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
dendritiformis C454]
Length = 812
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 19/181 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHERVIGQDEAVKAVSRAIRRARAGLKDPKRPMGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+S + + + G+ + ++ R KPYS
Sbjct: 559 AESLFGDENAVIRIDMSEYMEKHSTARLVGAPP-GYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
VV L++++K A P V + L + + G+ TDS GR V + + TS + G ++ T
Sbjct: 613 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNV--GAEAIKRNT 669
Query: 867 T 867
T
Sbjct: 670 T 670
>gi|387762193|ref|YP_006069170.1| chaperone protein ClpB [Streptococcus salivarius 57.I]
gi|339292960|gb|AEJ54307.1| chaperone protein ClpB [Streptococcus salivarius 57.I]
Length = 809
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 498 DSKRYLNLEAELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ L+ D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 598 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|449925017|ref|ZP_21800003.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 4SM1]
gi|449162093|gb|EMB65252.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 4SM1]
Length = 813
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|445370701|ref|ZP_21425903.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
thermophilus MTCC 5460]
gi|445385624|ref|ZP_21427611.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
thermophilus MTCC 5461]
gi|444751588|gb|ELW76310.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
thermophilus MTCC 5461]
gi|444751617|gb|ELW76337.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
thermophilus MTCC 5460]
Length = 816
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 505 DSKRYLNLESELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 557
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LV 793
VGK ++A ALAE++F ++ L+ D+S F +L G V
Sbjct: 558 GVGKTELAKALAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 604
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 605 GYDEGGELTEKVRNKPYSVLLFDEIEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 663
Query: 849 FVATSTI 855
+ TS +
Sbjct: 664 IIMTSNL 670
>gi|386085788|ref|YP_006001662.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
thermophilus ND03]
gi|312277501|gb|ADQ62158.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
thermophilus ND03]
Length = 809
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 498 DSKRYLNLESELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ L+ D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 598 GYDEGGELTEKVRNKPYSVLLFDEIEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|108803150|ref|YP_643087.1| ATPase [Rubrobacter xylanophilus DSM 9941]
gi|108764393|gb|ABG03275.1| ATPase AAA-2 [Rubrobacter xylanophilus DSM 9941]
Length = 837
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 17/173 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L E+V QDEA+ +++A+ R R G R VGS FLGP VGK ++
Sbjct: 530 LEAVLHERVIGQDEAVRAVAEAIRRARAGIKDPRRPVGS-------FIFLGPTGVGKTEL 582
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A LAE +FG + ++ +D+S Q + + + + G+ + ++ R
Sbjct: 583 ARTLAEYLFGEEEAMVRIDMSEYQEKHTVSRLVGAPP-GYVGYEEAGQ-----LTEQIRR 636
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+PYSVV ++++K A P + ++L + + G+ TD+ GR V + + TS +
Sbjct: 637 RPYSVVLFDEIEK-AHPDIFNTLLQILDDGRLTDAQGRTVDFRNAVIIMTSNV 688
>gi|340397940|ref|YP_004726965.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
salivarius CCHSS3]
gi|338741933|emb|CCB92438.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
salivarius CCHSS3]
Length = 809
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 498 DSKRYLNLEAELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LV 793
VGK ++A ALAE++F ++ L+ D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 598 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|357393001|ref|YP_004907842.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kitasatospora
setae KM-6054]
gi|311899478|dbj|BAJ31886.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Kitasatospora setae KM-6054]
Length = 829
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 23/172 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QD A+ +S+AV R R G R VGS FLGP VGK ++A AL
Sbjct: 534 LHARVIGQDRAVVAVSEAVRRSRAGMADPNRPVGS-------FLFLGPTGVGKTELAKAL 586
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE++FG++ +L+ D+S Q + + G V D + + R +
Sbjct: 587 AELIFGDEDRLVRFDMSEFQEKHTVSRLVGAPP---------GYVGYDEAGQLTEAVRRR 637
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSV+ ++++K A P V ++L + + G+ TD+ GR V + + TS I
Sbjct: 638 PYSVLLFDEVEK-AHPDVFNALLQVLDDGRLTDAQGRTVDFRNTVVIMTSNI 688
>gi|359410042|ref|ZP_09202507.1| ATPase AAA-2 domain protein [Clostridium sp. DL-VIII]
gi|357168926|gb|EHI97100.1| ATPase AAA-2 domain protein [Clostridium sp. DL-VIII]
Length = 823
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 98/186 (52%), Gaps = 20/186 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +I++AV R R+G R +GS FLGP VGK +++ AL
Sbjct: 510 LHRRVIGQNEAVKSIARAVRRARVGIKDPNRPIGS-------FIFLGPTGVGKTELSKAL 562
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I VD+S E S + + + G+ + + R KPYS
Sbjct: 563 AEAMFGDENSIIRVDMS-EYMESHSVARLIGSPPGYVGYEEGGQ-----LTEAVRRKPYS 616
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
+V L++++KA +P V + L + + G+ TD G+ V+ I + TS + G H + Q
Sbjct: 617 IVLLDEIEKA-NPEVFNILLQIMEDGRLTDGKGKIVNFKNTIIIMTSNV--GAHQIKKQK 673
Query: 867 TPVKFS 872
+ + FS
Sbjct: 674 S-IGFS 678
>gi|306832389|ref|ZP_07465542.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|304425429|gb|EFM28548.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
Length = 813
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD AI IS+A+ R + G R +GS FLGP
Sbjct: 502 DSKKYLNLEKELHKRVIGQDSAISAISRAIRRNQAGIRTGKRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAELLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 602 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|126653478|ref|ZP_01725571.1| ATP-dependent Clp protease ATPase subunit [Bacillus sp. B14905]
gi|126589756|gb|EAZ83890.1| ATP-dependent Clp protease ATPase subunit [Bacillus sp. B14905]
Length = 814
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 21/171 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q EA+ IS+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 507 LHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 559
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKP 804
AE++FG++ +I VD+S + + + F D + ++ R KP
Sbjct: 560 AEVMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGFDDG--------GQLTEKVRRKP 611
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
YSVV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 612 YSVVLLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNV 661
>gi|433446675|ref|ZP_20410567.1| ATP-dependent chaperone ClpB, class III stress response-related
ATPase [Anoxybacillus flavithermus TNO-09.006]
gi|432000182|gb|ELK21082.1| ATP-dependent chaperone ClpB, class III stress response-related
ATPase [Anoxybacillus flavithermus TNO-09.006]
Length = 860
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 95/184 (51%), Gaps = 21/184 (11%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIGN---GRDVGSNSKRGIWLAFLGPDKVG 738
K LR++ L E+V QDEA+ +S AV R R G R +GS FLGP VG
Sbjct: 558 KLLRLSNILHERVIGQDEAVELVSDAVLRARAGMKDPNRPIGS-------FLFLGPTGVG 610
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K ++A ALAE +F ++ ++I +D+S + + + + G+ + +
Sbjct: 611 KTELAKALAEALFDSEQQMIRIDMSEYMEKHAVSRLIGAPP-GYVGYEEGGQ-----LTE 664
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R KPYSV+ L++++K A P V + L + + G+ TDS GR V + + TS I G
Sbjct: 665 AVRRKPYSVILLDEIEK-AHPEVFNILLQMLDDGRMTDSQGRTVDFKNTVVIMTSNI--G 721
Query: 859 KHSV 862
H++
Sbjct: 722 SHTL 725
>gi|415886364|ref|ZP_11548144.1| ATPase AAA-2 domain protein [Bacillus methanolicus MGA3]
gi|387587051|gb|EIJ79374.1| ATPase AAA-2 domain protein [Bacillus methanolicus MGA3]
Length = 720
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA KV Q+EA+ +++A+ R R G R +GS F+GP VGK
Sbjct: 422 KNLETNLAAKVIGQEEAVRKVAKAIRRSRAGLKSKNRPIGS-------FLFVGPTGVGKT 474
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++ ALAE +FG K +I +D+S + I G + ++
Sbjct: 475 ELTKALAEELFGTKDAMIRLDMSEYMEKHSVSKIIG------SPPGYVGHEEAGQLTEKV 528
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKH 860
R PYS++ L++++K A P VQ + + G+ TDS GR VS + + TS G
Sbjct: 529 RRNPYSIILLDEIEK-AHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSNAGVGHK 587
Query: 861 SV 862
++
Sbjct: 588 TI 589
>gi|328954749|ref|YP_004372082.1| ATP-dependent chaperone ClpB [Coriobacterium glomerans PW2]
gi|328455073|gb|AEB06267.1| ATP-dependent chaperone ClpB [Coriobacterium glomerans PW2]
Length = 872
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
KTL L +V QDEA+ ++ AV R R G R +GS FLGP VGK
Sbjct: 564 KTLESELHRRVIGQDEAVSAVASAVRRSRAGLSDPNRPIGS-------FFFLGPTGVGKT 616
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++A ALAE +F ++ L+ +D +S+ F Q + G + +
Sbjct: 617 ELAKALAECLFDDERALVRID------MSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAI 670
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R +PYSV+ L++++K A P V + L + + G+ TD GR VS I + TS +
Sbjct: 671 RRRPYSVILLDEMEK-AHPDVFNVLLQVLDDGRLTDGQGRQVSFKNTIVIMTSNV 724
>gi|83816370|ref|YP_445441.1| ATP-dependent Clp protease, ATPase subunit [Salinibacter ruber DSM
13855]
gi|83757764|gb|ABC45877.1| ATP-dependent Clp protease, ATPase subunit [Salinibacter ruber DSM
13855]
Length = 875
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 656 SEGTFHNVV--QSSSCSAPHTGEPFD----PRDYKTLRI--ALAEKVGWQDEAICTISQA 707
+E H+V + + A TG P D P K L++ +L E V QDEAI +S+A
Sbjct: 482 AETEVHDVTSEEIAEVVAMMTGIPVDKISEPEQQKLLKMEESLKEHVVGQDEAIEKLSKA 541
Query: 708 VSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSS 764
+ R R G + +GS FLGP VGK ++A L E +F ++ LI +D
Sbjct: 542 IRRTRAGLKDPEKPIGS-------FIFLGPTGVGKTELAKVLTEYLFDSQESLIRID--- 591
Query: 765 EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSS 824
+S+ F + G + ++ R KPYSVV L++++KA P V +
Sbjct: 592 ---MSEYMEKFSVSRLVGAPPGYVGHEEGGQLTEKVRRKPYSVVLLDEIEKAH-PDVSNI 647
Query: 825 LTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L + + G TD GR+V I + TS I
Sbjct: 648 LLQVLDDGILTDGMGREVDFRNTILIMTSNI 678
>gi|288906347|ref|YP_003431569.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
gallolyticus UCN34]
gi|325979358|ref|YP_004289074.1| ATP-dependent Clp protease ATP-binding subunit clpC [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|386338786|ref|YP_006034955.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
gallolyticus subsp. gallolyticus ATCC 43143]
gi|288733073|emb|CBI14654.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
gallolyticus UCN34]
gi|325179286|emb|CBZ49330.1| ATP-dependent Clp protease ATP-binding subunit clpC [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|334281422|dbj|BAK28996.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
gallolyticus subsp. gallolyticus ATCC 43143]
Length = 813
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD AI IS+A+ R + G R +GS FLGP
Sbjct: 502 DSKKYLNLEKELHKRVIGQDSAISAISRAIRRNQAGIRTGKRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAELLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 602 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|312862613|ref|ZP_07722854.1| chaperone protein ClpB [Streptococcus vestibularis F0396]
gi|311101873|gb|EFQ60075.1| chaperone protein ClpB [Streptococcus vestibularis F0396]
Length = 816
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 505 DSKRYLNLEAELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 557
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ L+ D+S F +L G V
Sbjct: 558 GVGKTELAKALAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 604
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 605 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 663
Query: 849 FVATSTI 855
+ TS +
Sbjct: 664 IIMTSNL 670
>gi|296131785|ref|YP_003639032.1| ATPase AAA [Thermincola potens JR]
gi|296030363|gb|ADG81131.1| ATPase AAA-2 domain protein [Thermincola potens JR]
Length = 810
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 25/184 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +S+AV R R G R +GS FLGP VGK ++A AL
Sbjct: 507 LHQRVIGQDEAVKAVSRAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 559
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE +FG++ ++ +D+S + + G V D + + R K
Sbjct: 560 AEALFGDEDAMVRIDMSEYMEKHAVSRLVGAPP---------GYVGYDEGGQLTEAVRRK 610
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVH 863
PYSVV L++++K A P V + L + + G+ TD+ GR V + + TS + G H +
Sbjct: 611 PYSVVLLDEIEK-AHPEVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSNV--GAHLIK 667
Query: 864 PQTT 867
+ T
Sbjct: 668 KEAT 671
>gi|116627036|ref|YP_819655.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
thermophilus LMD-9]
gi|116100313|gb|ABJ65459.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Streptococcus thermophilus LMD-9]
Length = 816
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 505 DSKRYLNLESELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 557
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ L+ D+S F +L G V
Sbjct: 558 GVGKTELAKALAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 604
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 605 GYDEGGELTEKVRNKPYSVLLFDEIEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 663
Query: 849 FVATSTI 855
+ TS +
Sbjct: 664 IIMTSNL 670
>gi|347524765|ref|YP_004831513.1| ATP-binding Clp protease subunit [Lactobacillus ruminis ATCC 27782]
gi|345283724|gb|AEN77577.1| ATP-binding Clp protease subunit [Lactobacillus ruminis ATCC 27782]
Length = 834
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 109/225 (48%), Gaps = 34/225 (15%)
Query: 639 NKEQCFSGSISAEFDA--VSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGW 696
++++ ++G +SAE A VSE T V Q + + L L ++V
Sbjct: 472 DEKKEYAGIVSAEDVATVVSEWTGVPVTQLTKTESER---------LINLEKILHKRVVG 522
Query: 697 QDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGN 753
QDEAI +S+A+ R R G R +GS FLGP VGK ++A ALAE +FG+
Sbjct: 523 QDEAIKAVSKAIRRARSGLSDPTRPIGS-------FMFLGPTGVGKTELAKALAEAMFGS 575
Query: 754 KGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFL 810
+ +I +D+S + + G V D + ++ R+KPYSVV L
Sbjct: 576 EDAMIRIDMSEYMEKYSTSRLIGAPP---------GYVGYDEGGQLTEKVRNKPYSVVLL 626
Query: 811 EDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P V + L + + G TDS GR V+ I + TS +
Sbjct: 627 DEVEK-AHPDVFNILLQVLDDGYLTDSKGRKVNFRNTIIIMTSNL 670
>gi|335998580|ref|ZP_08564491.1| ATP-binding Clp protease subunit [Lactobacillus ruminis SPM0211]
gi|335348435|gb|EGM49941.1| ATP-binding Clp protease subunit [Lactobacillus ruminis SPM0211]
Length = 834
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 109/225 (48%), Gaps = 34/225 (15%)
Query: 639 NKEQCFSGSISAEFDA--VSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGW 696
++++ ++G +SAE A VSE T V Q + + L L ++V
Sbjct: 472 DEKKEYAGIVSAEDVATVVSEWTGVPVTQLTKTESER---------LINLEKILHKRVVG 522
Query: 697 QDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGN 753
QDEAI +S+A+ R R G R +GS FLGP VGK ++A ALAE +FG+
Sbjct: 523 QDEAIKAVSKAIRRARSGLSDPTRPIGS-------FMFLGPTGVGKTELAKALAEAMFGS 575
Query: 754 KGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFL 810
+ +I +D+S + + G V D + ++ R+KPYSVV L
Sbjct: 576 EDAMIRIDMSEYMEKYSTSRLIGAPP---------GYVGYDEGGQLTEKVRNKPYSVVLL 626
Query: 811 EDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P V + L + + G TDS GR V+ I + TS +
Sbjct: 627 DEVEK-AHPDVFNILLQVLDDGYLTDSKGRKVNFRNTIIIMTSNL 670
>gi|429123472|ref|ZP_19184005.1| hemolysin B ATP-binding subunit [Brachyspira hampsonii 30446]
gi|426280746|gb|EKV57756.1| hemolysin B ATP-binding subunit [Brachyspira hampsonii 30446]
Length = 828
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +KV Q+EAI +IS+A+ R R G + R +GS FLGP VGK +A L
Sbjct: 515 LHQKVVGQEEAISSISKAIRRSRAGLKTSKRPLGS-------FIFLGPTGVGKTALAKVL 567
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
+E +FG+ LI +D+S + F + G + ++ R KPYS
Sbjct: 568 SEFMFGDSDALIRIDMS------EFMEKFAVSRLIGAPPGYVGYEEGGGLTEKVRRKPYS 621
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++ ++++KA P V + L + + G+ TD++GR V S I + TS +
Sbjct: 622 LILFDEIEKA-HPDVTNILLQVLEEGQLTDNFGRKVDFSNTIIIITSNL 669
>gi|373859602|ref|ZP_09602328.1| ATPase AAA-2 domain protein [Bacillus sp. 1NLA3E]
gi|372450597|gb|EHP24082.1| ATPase AAA-2 domain protein [Bacillus sp. 1NLA3E]
Length = 813
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V Q+EA+ +S+AV R R G R +GS FLGP VGK ++A ALAE
Sbjct: 508 RVIGQEEAVVAVSKAVRRARAGLKDPKRPIGS-------FVFLGPTGVGKTELARALAEA 560
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG++ +I +D+ SE S + + G+ + ++ R KPYSV+
Sbjct: 561 MFGDEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYSVIL 614
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 615 LDEIEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNV 659
>gi|365864820|ref|ZP_09404496.1| putative chaperone [Streptomyces sp. W007]
gi|364005716|gb|EHM26780.1| putative chaperone [Streptomyces sp. W007]
Length = 846
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 25/176 (14%)
Query: 693 KVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
++ QDEA+ +SQAV R R G G R VGS FLGP VGK ++A LAE+
Sbjct: 537 RIVGQDEAVTAVSQAVRRNRAGMGDPNRPVGS-------FLFLGPTGVGKTELAKTLAEL 589
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
+FG+ +++ D+S Q + G V D + ++ R PYS
Sbjct: 590 LFGDDDRMVRFDMSEFQEKHTVARLVGAPP---------GYVGYDEAGQLTEKVRRNPYS 640
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
VV ++++K A P V ++L + + G+ TD GR V + + TS I G H +
Sbjct: 641 VVLFDEVEK-AHPDVFNTLLQILDDGRLTDGQGRTVDFRHCVVIMTSNI--GAHRI 693
>gi|294507325|ref|YP_003571383.1| ATP-dependent Clp protease, ATPase subunit [Salinibacter ruber M8]
gi|294343653|emb|CBH24431.1| ATP-dependent Clp protease, ATPase subunit [Salinibacter ruber M8]
Length = 875
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 656 SEGTFHNVV--QSSSCSAPHTGEPFD----PRDYKTLRI--ALAEKVGWQDEAICTISQA 707
+E H+V + + A TG P D P K L++ +L E V QDEAI +S+A
Sbjct: 482 AETEVHDVTSEEIAEVVAMMTGIPVDKISEPEQQKLLKMEESLKEHVVGQDEAIEKLSKA 541
Query: 708 VSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSS 764
+ R R G + +GS FLGP VGK ++A L E +F ++ LI +D
Sbjct: 542 IRRTRAGLKDPEKPIGS-------FIFLGPTGVGKTELAKVLTEYLFDSQESLIRID--- 591
Query: 765 EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSS 824
+S+ F + G + ++ R KPYSVV L++++KA P V +
Sbjct: 592 ---MSEYMEKFSVSRLVGAPPGYVGHEEGGQLTEKVRRKPYSVVLLDEIEKAH-PDVSNI 647
Query: 825 LTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L + + G TD GR+V I + TS I
Sbjct: 648 LLQVLDDGILTDGMGREVDFRNTILIMTSNI 678
>gi|345303259|ref|YP_004825161.1| ATPase AAA-2 domain-containing protein [Rhodothermus marinus
SG0.5JP17-172]
gi|345112492|gb|AEN73324.1| ATPase AAA-2 domain protein [Rhodothermus marinus SG0.5JP17-172]
Length = 850
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 93/198 (46%), Gaps = 23/198 (11%)
Query: 667 SSCSAPHTGEPFD----PRDYKTLRI--ALAEKVGWQDEAICTISQAVSRWRIG---NGR 717
+ A TG P D P K LR+ AL +V QDEAI +++A+ R R G R
Sbjct: 496 AEVVAMMTGIPVDKITEPEQKKLLRMEEALKSRVIGQDEAISKLARAIRRTRAGLKDPKR 555
Query: 718 DVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC 777
+GS FLGP VGK ++A AL E +F ++ LI +D +S+ F
Sbjct: 556 PIGS-------FIFLGPTGVGKTELAKALTEYLFDSEDALIRID------MSEYMEKFSV 602
Query: 778 QNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDS 837
+ G + ++ R KPYSVV L++++K A P V + L + + G TD
Sbjct: 603 SRLIGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEK-AHPDVFNILLQVLDDGILTDG 661
Query: 838 YGRDVSISGMIFVATSTI 855
GR V I + TS I
Sbjct: 662 LGRRVDFRNTIIIMTSNI 679
>gi|418016962|ref|ZP_12656521.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
salivarius M18]
gi|345527655|gb|EGX30963.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
salivarius M18]
Length = 816
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 505 DSKRYLNLEAELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 557
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ L+ D+S F +L G V
Sbjct: 558 GVGKTELAKALAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 604
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 605 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 663
Query: 849 FVATSTI 855
+ TS +
Sbjct: 664 IIMTSNL 670
>gi|169830065|ref|YP_001700223.1| negative regulator of genetic competence clpC/mecB [Lysinibacillus
sphaericus C3-41]
gi|168994553|gb|ACA42093.1| Negative regulator of genetic competence clpC/mecB [Lysinibacillus
sphaericus C3-41]
Length = 813
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 21/171 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q EA+ IS+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKP 804
AE++FG++ +I VD+S + + + F D + ++ R KP
Sbjct: 559 AEVMFGDEDAMIRVDMSEYMEKHSTSRLVGSPPGYVGFDDG--------GQLTEKVRRKP 610
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
YSVV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 611 YSVVLLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRVVDFRNTVVIMTSNV 660
>gi|387928140|ref|ZP_10130818.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus PB1]
gi|387587726|gb|EIJ80048.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus PB1]
Length = 814
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ IS+AV R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHSRVIGQEEAVKAISKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AEAMFGDEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 VILLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNV 660
>gi|313890361|ref|ZP_07823992.1| chaperone protein ClpB [Streptococcus pseudoporcinus SPIN 20026]
gi|416851448|ref|ZP_11908593.1| Clp amino terminal domain protein [Streptococcus pseudoporcinus LQ
940-04]
gi|313121204|gb|EFR44312.1| chaperone protein ClpB [Streptococcus pseudoporcinus SPIN 20026]
gi|356738937|gb|EHI64169.1| Clp amino terminal domain protein [Streptococcus pseudoporcinus LQ
940-04]
Length = 813
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEAI IS+A+ R + G R +GS FLGP
Sbjct: 502 DSQKYLQLEKELHKRVIGQDEAISAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V + I
Sbjct: 602 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFTNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|308071007|ref|YP_003872612.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
polymyxa E681]
gi|305860286|gb|ADM72074.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
polymyxa E681]
Length = 814
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 20/202 (9%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHERVIGQDEAVKAVSRAIRRARAGLKDPKRPMGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AESMFGDENAVIRIDM-SEYMEKHSTSRLVGAPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
VV L++++K A P V + L + + G+ TDS GR V + + TS + G ++ +
Sbjct: 613 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNV--GAQAIKRNS 669
Query: 867 TPVKFSEEIILGAKRWQMQTAI 888
T + F+ + GA M+ +
Sbjct: 670 T-LGFTAVVDAGADYDNMKGKV 690
>gi|268316901|ref|YP_003290620.1| ATPase AAA-2 domain-containing protein [Rhodothermus marinus DSM
4252]
gi|262334435|gb|ACY48232.1| ATPase AAA-2 domain protein [Rhodothermus marinus DSM 4252]
Length = 850
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 93/198 (46%), Gaps = 23/198 (11%)
Query: 667 SSCSAPHTGEPFD----PRDYKTLRI--ALAEKVGWQDEAICTISQAVSRWRIG---NGR 717
+ A TG P D P K LR+ AL +V QDEAI +++A+ R R G R
Sbjct: 496 AEVVAMMTGIPVDKITEPEQKKLLRMEEALKSRVIGQDEAISKLARAIRRTRAGLKDPKR 555
Query: 718 DVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC 777
+GS FLGP VGK ++A AL E +F ++ LI +D +S+ F
Sbjct: 556 PIGS-------FIFLGPTGVGKTELAKALTEYLFDSEDALIRID------MSEYMEKFSV 602
Query: 778 QNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDS 837
+ G + ++ R KPYSVV L++++K A P V + L + + G TD
Sbjct: 603 SRLIGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEK-AHPDVFNILLQVLDDGILTDG 661
Query: 838 YGRDVSISGMIFVATSTI 855
GR V I + TS I
Sbjct: 662 LGRRVDFRNTIIIMTSNI 679
>gi|423720794|ref|ZP_17694976.1| ATP-dependent Clp protease, ATP-binding subunit [Geobacillus
thermoglucosidans TNO-09.020]
gi|383366147|gb|EID43438.1| ATP-dependent Clp protease, ATP-binding subunit [Geobacillus
thermoglucosidans TNO-09.020]
Length = 720
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA+KV Q+EA+ +++A+ R R G R +GS F+GP VGK
Sbjct: 418 KHLEENLAKKVIGQEEAVKKVAKAIRRSRAGLKAKHRPIGS-------FLFVGPTGVGKT 470
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++A LAE +FG+K +I +D+S + + + + G+ + ++
Sbjct: 471 ELAKTLAEELFGSKDAMIRLDMSEYMEKHSVSKLIGSPP-GYVGFEEAGQ-----LTEKV 524
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
R PYS++ L++++K A P VQ + + G+ TDS GR VS + +ATS
Sbjct: 525 RRNPYSIILLDEIEK-AHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATSN 577
>gi|333980531|ref|YP_004518476.1| ATPase AAA [Desulfotomaculum kuznetsovii DSM 6115]
gi|333824012|gb|AEG16675.1| ATPase AAA-2 domain protein [Desulfotomaculum kuznetsovii DSM 6115]
Length = 828
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 115/242 (47%), Gaps = 19/242 (7%)
Query: 629 QEANTPKLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRI 688
QE K ++ + Q + + E V+E +V SS + + + + LR+
Sbjct: 450 QEQQLKKELEARRQDWQAARGKEELVVTEEDIAQIV--SSWTGIPVKKLAEEETERLLRL 507
Query: 689 A--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASA 745
L ++V QDEA+ ++++V R R G + KR I FLGP VGK ++A A
Sbjct: 508 EEILHQRVVGQDEAVRAVARSVRRARAGL-----KDPKRPIGSFIFLGPTGVGKTELARA 562
Query: 746 LAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPY 805
LAE +FG++ L+ +D+S + F + G + + R KPY
Sbjct: 563 LAEALFGDEDALVRLDMS------EYMERFAVSRLVGAPPGYVGYEEGGQLTEAVRRKPY 616
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQ 865
+VV L++++K A P V + L + + G+ TD+ GR V + + TS + G H++ +
Sbjct: 617 TVVLLDEIEK-AHPDVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSNV--GVHTLRKE 673
Query: 866 TT 867
T
Sbjct: 674 GT 675
>gi|450062481|ref|ZP_21844366.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NLML5]
gi|449205821|gb|EMC06551.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans NLML5]
Length = 813
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFDILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|336065151|ref|YP_004560010.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pasteurianus ATCC 43144]
gi|334283351|dbj|BAK30924.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
pasteurianus ATCC 43144]
Length = 813
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD AI IS+A+ R + G R +GS FLGP
Sbjct: 502 DSKKYLNLEKELHKRVIGQDSAISAISRAIRRNQAGIRTGKRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAELLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 602 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|339300770|ref|ZP_08649901.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
agalactiae ATCC 13813]
gi|319745774|gb|EFV98069.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
agalactiae ATCC 13813]
Length = 815
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ IS+A+ R + G R +GS FLGP
Sbjct: 502 DSKKYLNLEKELHKRVIGQDDAVTAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 602 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|445062710|ref|ZP_21375048.1| hemolysin B ATP-binding subunit [Brachyspira hampsonii 30599]
gi|444505897|gb|ELV06321.1| hemolysin B ATP-binding subunit [Brachyspira hampsonii 30599]
Length = 828
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +KV Q+EAI +IS+A+ R R G + R +GS FLGP VGK +A L
Sbjct: 515 LHQKVVGQEEAISSISKAIRRSRAGLKTSKRPLGS-------FIFLGPTGVGKTALAKVL 567
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
+E +FG+ LI +D+S + F + G + ++ R KPYS
Sbjct: 568 SEFMFGDSDALIRIDMS------EFMEKFAVSRLIGAPPGYVGYEEGGGLTEKVRRKPYS 621
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++ ++++KA P V + L + + G+ TD++GR V S I + TS +
Sbjct: 622 LILFDEIEKA-HPDVTNILLQVLEEGQLTDNFGRKVDFSNTIIIITSNL 669
>gi|415886308|ref|ZP_11548131.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus MGA3]
gi|387588961|gb|EIJ81282.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus MGA3]
Length = 814
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ IS+AV R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHSRVIGQEEAVKAISKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AEAMFGDEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 VILLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNV 660
>gi|206890329|ref|YP_002249718.1| chaperone ClpB 1 [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742267|gb|ACI21324.1| chaperone ClpB 1 [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 876
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 27/197 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEAI +S A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 571 LKERVVGQDEAIIAVSNAIRRARAGLQDPNRPIGS-------FMFLGPTGVGKTELAKAL 623
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +F ++ +I +D+S Q + + + + G+ + + R +PYS
Sbjct: 624 AEFLFDDENAMIRIDMSEYQERHTVSRLIGAPP-GYVGYEEGGQ-----LTEAVRRRPYS 677
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
VV ++++KA + + L + + G+ TD +GR V I + TS I S H Q
Sbjct: 678 VVLFDEIEKAHQEVF-NILLQILDDGRLTDGHGRTVDFRNTIIIMTSNI----GSAHIQ- 731
Query: 867 TPVKFSEEIILGAKRWQ 883
+F E G++ WQ
Sbjct: 732 ---EFLEN--KGSEHWQ 743
>gi|336236273|ref|YP_004588889.1| ATPase AAA-2 domain-containing protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|335363128|gb|AEH48808.1| ATPase AAA-2 domain protein [Geobacillus thermoglucosidasius
C56-YS93]
Length = 720
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA+KV Q+EA+ +++A+ R R G R +GS F+GP VGK
Sbjct: 418 KHLEENLAKKVIGQEEAVKKVAKAIRRSRAGLKAKHRPIGS-------FLFVGPTGVGKT 470
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++A LAE +FG+K +I +D+S + + + + G+ + ++
Sbjct: 471 ELAKTLAEELFGSKDAMIRLDMSEYMEKHSVSKLIGSPP-GYVGFEEAGQ-----LTEKV 524
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
R PYS++ L++++K A P VQ + + G+ TDS GR VS + +ATS
Sbjct: 525 RRNPYSIILLDEIEK-AHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATSN 577
>gi|219848346|ref|YP_002462779.1| ATPase AAA-2 domain-containing protein [Chloroflexus aggregans DSM
9485]
gi|219542605|gb|ACL24343.1| ATPase AAA-2 domain protein [Chloroflexus aggregans DSM 9485]
Length = 834
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L ++ Q EAI TIS+AV R R G + KR I FLGP VGK ++A ALAE
Sbjct: 519 LHSRIVGQHEAIVTISKAVRRARAGL-----KDPKRPIGSFIFLGPTGVGKTELAKALAE 573
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
+FG + LI +D+S Q + + I + + G L D + R KPYS
Sbjct: 574 FMFGTEEALIKIDMSEFQERHTTSRLVGSPPGYIGYGE----GGQLTDAV----RRKPYS 625
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P + L + + G TD GR V I + TS +
Sbjct: 626 VVLFDEIEK-AHPDAFNLLLQVLEDGHLTDGKGRRVDFRNTIIIMTSNV 673
>gi|392427998|ref|YP_006469009.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
intermedius JTH08]
gi|419777058|ref|ZP_14302976.1| Clp amino terminal domain protein [Streptococcus intermedius SK54]
gi|383845269|gb|EID82673.1| Clp amino terminal domain protein [Streptococcus intermedius SK54]
gi|391757144|dbj|BAM22761.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
intermedius JTH08]
Length = 809
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q+EAI IS+A+ R + G + R +GS FLGP
Sbjct: 498 DAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDETALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R++PYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 598 GYEEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 656
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V V+F E
Sbjct: 657 IIMTSNLGATSLRDDKTVGFGARDVRFDHE 686
>gi|423069576|ref|ZP_17058362.1| hypothetical protein HMPREF9682_01583 [Streptococcus intermedius
F0395]
gi|355364253|gb|EHG11986.1| hypothetical protein HMPREF9682_01583 [Streptococcus intermedius
F0395]
Length = 809
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q+EAI IS+A+ R + G + R +GS FLGP
Sbjct: 498 DAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDETALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R++PYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 598 GYEEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 656
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V V+F E
Sbjct: 657 IIMTSNLGATSLRDDKTVGFGARDVRFDHE 686
>gi|387908880|ref|YP_006339186.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
thermophilus MN-ZLW-002]
gi|387573815|gb|AFJ82521.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
thermophilus MN-ZLW-002]
Length = 809
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 498 DSKRYLNLESELHKRVIGQDEALSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LV 793
VGK ++A ALAE++F ++ L+ D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 598 GYDEGGELTEKVRNKPYSVLLFDEIEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|450145709|ref|ZP_21874705.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 1ID3]
gi|449148965|gb|EMB52790.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans 1ID3]
Length = 813
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAMSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|421858335|ref|ZP_16290606.1| ATPase [Paenibacillus popilliae ATCC 14706]
gi|410832093|dbj|GAC41043.1| ATPase [Paenibacillus popilliae ATCC 14706]
Length = 812
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 19/181 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHERVIGQDEAVKAVSRAIRRARAGLKDPKRPMGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+S + + + G+ + ++ R KPYS
Sbjct: 559 AESLFGDENAVIRIDMSEYMEKHSTARLVGAPP-GYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
VV L++++K A P V + L + + G+ TDS GR V + + TS + G ++ T
Sbjct: 613 VVLLDEVEK-AHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNV--GAEAIKRNT 669
Query: 867 T 867
T
Sbjct: 670 T 670
>gi|322517676|ref|ZP_08070539.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
vestibularis ATCC 49124]
gi|322123664|gb|EFX95256.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
vestibularis ATCC 49124]
Length = 816
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 505 DSKRYLNLEAELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 557
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ L+ D+S F +L G V
Sbjct: 558 GVGKTELAKALAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 604
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 605 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 663
Query: 849 FVATSTI 855
+ TS +
Sbjct: 664 IIMTSNL 670
>gi|306834511|ref|ZP_07467624.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
bovis ATCC 700338]
gi|304423313|gb|EFM26466.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
bovis ATCC 700338]
Length = 813
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD AI IS+A+ R + G R +GS FLGP
Sbjct: 502 DSKKYLNLEKELHKRVIGQDSAISAISRAIRRNQAGIRTGKRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAELLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 602 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|77408447|ref|ZP_00785186.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
agalactiae COH1]
gi|421146642|ref|ZP_15606349.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
agalactiae GB00112]
gi|77172970|gb|EAO76100.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
agalactiae COH1]
gi|401686666|gb|EJS82639.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
agalactiae GB00112]
Length = 815
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ IS+A+ R + G R +GS FLGP
Sbjct: 502 DSKKYLNLEKELHKRVIGQDDAVTAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 602 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|410595193|ref|YP_006951920.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
agalactiae SA20-06]
gi|410518832|gb|AFV72976.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
agalactiae SA20-06]
Length = 815
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ IS+A+ R + G R +GS FLGP
Sbjct: 502 DSKKYLNLEKELHKRVIGQDDAVTAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 602 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|421531735|ref|ZP_15978114.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
agalactiae STIR-CD-17]
gi|403643065|gb|EJZ03857.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
agalactiae STIR-CD-17]
Length = 815
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ IS+A+ R + G R +GS FLGP
Sbjct: 502 DSKKYLNLEKELHKRVIGQDDAVTAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 602 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|150015015|ref|YP_001307269.1| ATPase [Clostridium beijerinckii NCIMB 8052]
gi|149901480|gb|ABR32313.1| ATPase AAA-2 domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 824
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 98/186 (52%), Gaps = 20/186 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ +I++AV R R+G R +GS FLGP VGK +++ AL
Sbjct: 510 LHKRVVGQNEAVKSIARAVRRARVGIKDPNRPIGS-------FIFLGPTGVGKTELSKAL 562
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+S E S + + G+ + + R KPYS
Sbjct: 563 AEAMFGDENNIIRIDMS-EYMEGHSVSRLIGSPPGYVGHEEGGQ-----LTEAVRRKPYS 616
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
+V L++++KA +P V + L + + G+ TD G+ V+ I + TS + G H + Q
Sbjct: 617 IVLLDEIEKA-NPEVFNILLQIMEDGRLTDGKGKIVNFKNTIIIMTSNV--GAHQIKKQK 673
Query: 867 TPVKFS 872
+ + FS
Sbjct: 674 S-IGFS 678
>gi|289768009|ref|ZP_06527387.1| Clp protease ATP binding subunit [Streptomyces lividans TK24]
gi|289698208|gb|EFD65637.1| Clp protease ATP binding subunit [Streptomyces lividans TK24]
Length = 842
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 534 LHERVVGQDEAVRVVSDAVLRSRAGLSSADRPIGS-------FLFLGPTGVGKTELARAL 586
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +++ +D+S Q + + + + G+ + + R PYS
Sbjct: 587 AEALFGSEDRMVRLDMSEYQERHTVSRLVGAPP-GYVGHEEAGQ-----LTEVVRRHPYS 640
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++ L++++K A P V + L + + G+ TDS GR V S + V TS +
Sbjct: 641 LLLLDEVEK-AHPDVFNILLQVLDDGRLTDSQGRTVDFSNTVVVMTSNL 688
>gi|421451468|ref|ZP_15900829.1| Negative regulator of genetic competence clpC/mecB [Streptococcus
salivarius K12]
gi|400181899|gb|EJO16161.1| Negative regulator of genetic competence clpC/mecB [Streptococcus
salivarius K12]
Length = 816
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 505 DSKRYLNLEAELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 557
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ L+ D+S F +L G V
Sbjct: 558 GVGKTELAKALAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 604
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 605 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 663
Query: 849 FVATSTI 855
+ TS +
Sbjct: 664 IIMTSNL 670
>gi|387783214|ref|YP_006069297.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
salivarius JIM8777]
gi|338744096|emb|CCB94462.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
salivarius JIM8777]
Length = 816
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 505 DSKRYLNLEAELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 557
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ L+ D+S F +L G V
Sbjct: 558 GVGKTELAKALAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 604
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 605 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 663
Query: 849 FVATSTI 855
+ TS +
Sbjct: 664 IIMTSNL 670
>gi|163848025|ref|YP_001636069.1| ATPase [Chloroflexus aurantiacus J-10-fl]
gi|222525912|ref|YP_002570383.1| ATPase AAA-2 domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|163669314|gb|ABY35680.1| ATPase AAA-2 domain protein [Chloroflexus aurantiacus J-10-fl]
gi|222449791|gb|ACM54057.1| ATPase AAA-2 domain protein [Chloroflexus sp. Y-400-fl]
Length = 833
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L ++ Q EAI TIS+AV R R G + KR I FLGP VGK ++A ALAE
Sbjct: 518 LHSRIVGQHEAIVTISKAVRRARAGL-----KDPKRPIGSFIFLGPTGVGKTELAKALAE 572
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
+FG + LI +D+S Q + + I + + G L D + R KPYS
Sbjct: 573 FMFGTEEALIKIDMSEFQERHTTSRLVGSPPGYIGYGE----GGQLTDAV----RRKPYS 624
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P + L + + G TD GR V I + TS +
Sbjct: 625 VVLFDEIEK-AHPDAFNLLLQVLEDGHLTDGKGRRVDFRNTIIIMTSNV 672
>gi|21224716|ref|NP_630495.1| Clp protease ATP binding subunit [Streptomyces coelicolor A3(2)]
gi|3218360|emb|CAA19619.1| clp protease ATP binding subunit [Streptomyces coelicolor A3(2)]
Length = 842
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 534 LHERVVGQDEAVRVVSDAVLRSRAGLSSADRPIGS-------FLFLGPTGVGKTELARAL 586
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +++ +D+S Q + + + + G+ + + R PYS
Sbjct: 587 AEALFGSEDRMVRLDMSEYQERHTVSRLVGAPP-GYVGHEEAGQ-----LTEVVRRHPYS 640
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++ L++++K A P V + L + + G+ TDS GR V S + V TS +
Sbjct: 641 LLLLDEVEK-AHPDVFNILLQVLDDGRLTDSQGRTVDFSNTVVVMTSNL 688
>gi|291459189|ref|ZP_06598579.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 078 str. F0262]
gi|291418443|gb|EFE92162.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 078 str. F0262]
Length = 828
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 23/177 (12%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L L ++V Q EA+ ++QA+ R R+G R +GS FLGP VGK
Sbjct: 504 KKLEQNLHQRVVGQSEAVHAVAQAIKRGRVGLKDPRRPIGS-------FMFLGPTGVGKT 556
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIY 797
+++ ALAE++FG++ LI VD+S + ++ G V D +
Sbjct: 557 ELSKALAELMFGSENDLIRVDMS---------EYMEKYSVSKMIGSPPGYVGYDEGGQLS 607
Query: 798 QEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
++ R +PYSVV ++++K A P V + L + + G TD+ GR +S I + TS
Sbjct: 608 EKVRRRPYSVVLFDEIEK-AHPDVLNILLQVLDDGHITDAQGRKISFKNTIIIMTSN 663
>gi|399055773|ref|ZP_10743423.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. CF112]
gi|433543324|ref|ZP_20499734.1| negative regulator of genetic competence [Brevibacillus agri
BAB-2500]
gi|398046636|gb|EJL39230.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. CF112]
gi|432185453|gb|ELK42944.1| negative regulator of genetic competence [Brevibacillus agri
BAB-2500]
Length = 816
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 91/183 (49%), Gaps = 23/183 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +IS+A+ R R G R +GS FLGP VGK ++A A+
Sbjct: 511 LHDRVIGQDEAVKSISRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAV 563
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKP 804
AE +FG++ +I VD+S + + F + + ++ R KP
Sbjct: 564 AETLFGDEDAMIRVDMSEYMEKHSTARLVGAPPGYVGFDEG--------GQLTEKVRRKP 615
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHP 864
YSV+ L++++K A P V + L + + G+ TDS GR V + + TS + G +
Sbjct: 616 YSVILLDEIEK-AHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSNV--GASMIKK 672
Query: 865 QTT 867
TT
Sbjct: 673 NTT 675
>gi|343526449|ref|ZP_08763399.1| Clp amino terminal domain protein [Streptococcus constellatus
subsp. pharyngis SK1060 = CCUG 46377]
gi|343394400|gb|EGV06948.1| Clp amino terminal domain protein [Streptococcus constellatus
subsp. pharyngis SK1060 = CCUG 46377]
Length = 809
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q+EAI IS+A+ R + G + R +GS FLGP
Sbjct: 498 DAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDETALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R++PYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 598 GYEEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 656
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V V+F E
Sbjct: 657 IIMTSNLGATSLRDDKTVGFGARDVRFDHE 686
>gi|209560191|ref|YP_002286663.1| endopeptidase Clp ATP-binding protein C [Streptococcus pyogenes
NZ131]
gi|209541392|gb|ACI61968.1| Putative endopeptidase Clp ATP-binding chain C [Streptococcus
pyogenes NZ131]
Length = 814
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQDAAVTAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDEAALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + Q+ R+KPYSV+ ++++K A P + + + + G TDS GR V S I
Sbjct: 603 GYDEGGELTQKVRNKPYSVLLFDEVEK-AHPDIFNVFLQVLDDGILTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|320449888|ref|YP_004201984.1| chaperone protein ClpB 1 [Thermus scotoductus SA-01]
gi|320150057|gb|ADW21435.1| chaperone protein ClpB 1 [Thermus scotoductus SA-01]
Length = 742
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 679 DPRDYKTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDK 736
D D K +R+ L ++V Q+EAI ++ A+ R R+G +G ++ F+G
Sbjct: 438 DKDDEKLMRLEEELRKRVVGQEEAIRALASALRRARVG----LGGRTRVAASFLFVGQSG 493
Query: 737 VGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNI--DFCDCKLRGKVLVD 794
VGK ++A ALAE++FG++ LI D+S Q +P+S+ + + G+
Sbjct: 494 VGKTQLAKALAEVLFGSERALIRFDMSEFQ---EPHSVSKLIGAPPGYVGYEQGGR---- 546
Query: 795 YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ + R +P+SVV L++++K A P + ++ + + G+ TD GR V +I + TS
Sbjct: 547 -LTEAVRRQPFSVVLLDEIEK-AHPDIYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTS 603
>gi|228477791|ref|ZP_04062419.1| chaperone protein ClpB 1 [Streptococcus salivarius SK126]
gi|228250483|gb|EEK09697.1| chaperone protein ClpB 1 [Streptococcus salivarius SK126]
Length = 816
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 505 DSKRYLNLEAELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 557
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ L+ D+S F +L G V
Sbjct: 558 GVGKTELAKALAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 604
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 605 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 663
Query: 849 FVATSTI 855
+ TS +
Sbjct: 664 IIMTSNL 670
>gi|363897398|ref|ZP_09323937.1| hypothetical protein HMPREF9624_00499 [Oribacterium sp. ACB7]
gi|361958895|gb|EHL12192.1| hypothetical protein HMPREF9624_00499 [Oribacterium sp. ACB7]
Length = 818
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 87/178 (48%), Gaps = 23/178 (12%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L L +V Q+EA+ ++QA+ R R+G R +GS FLGP VGK
Sbjct: 503 KNLENLLHTRVIGQNEAVHAVAQAIKRGRVGLKDPKRPIGS-------FMFLGPTGVGKT 555
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIY 797
+++ ALAE VFG++ LI VD+S + + G V D +
Sbjct: 556 ELSKALAETVFGSEQNLIRVDMSEYMEKYSVSKMIGSPP---------GYVGYDEGGQLS 606
Query: 798 QEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++ R PYSV+ ++++K A P V + L + + G TDS GR VS I + TS +
Sbjct: 607 EKVRRNPYSVILFDEIEK-AHPDVLNILLQVLDDGHITDSQGRKVSFKNTIIIMTSNV 663
>gi|76788075|ref|YP_330445.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
agalactiae A909]
gi|77405660|ref|ZP_00782748.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
agalactiae H36B]
gi|77411530|ref|ZP_00787873.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
agalactiae CJB111]
gi|406710221|ref|YP_006764947.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
agalactiae GD201008-001]
gi|424048711|ref|ZP_17786262.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
agalactiae ZQ0910]
gi|76563132|gb|ABA45716.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
agalactiae A909]
gi|77162384|gb|EAO73352.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
agalactiae CJB111]
gi|77175733|gb|EAO78514.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
agalactiae H36B]
gi|389649732|gb|EIM71207.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
agalactiae ZQ0910]
gi|406651106|gb|AFS46507.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
agalactiae GD201008-001]
Length = 815
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ IS+A+ R + G R +GS FLGP
Sbjct: 502 DSKKYLNLEKELHKRVIGQDDAVTAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 602 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|226309775|ref|YP_002769669.1| negative regulator of genetic competence [Brevibacillus brevis NBRC
100599]
gi|226092723|dbj|BAH41165.1| negative regulator of genetic competence [Brevibacillus brevis NBRC
100599]
Length = 815
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 91/183 (49%), Gaps = 23/183 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +IS+A+ R R G R +GS FLGP VGK ++A A+
Sbjct: 510 LHDRVIGQDEAVKSISRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAV 562
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKP 804
AE +FG++ +I VD+S + + F + + ++ R KP
Sbjct: 563 AETLFGDEDAMIRVDMSEYMEKHSTARLVGAPPGYVGFDEG--------GQLTEKVRRKP 614
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHP 864
YSV+ L++++K A P V + L + + G+ TDS GR V + + TS + G +
Sbjct: 615 YSVILLDEIEK-AHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSNV--GASMIKK 671
Query: 865 QTT 867
TT
Sbjct: 672 NTT 674
>gi|188590460|ref|YP_001919641.1| negative regulator of genetic competence ClpC/mecB [Clostridium
botulinum E3 str. Alaska E43]
gi|188500741|gb|ACD53877.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum E3 str. Alaska E43]
Length = 814
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 96/186 (51%), Gaps = 33/186 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q EA+ +I++AV R R+G R +G+ FLGP VGK +++ AL
Sbjct: 512 LEKRVIGQTEAVESIAKAVRRARVGIKDPNRPIGT-------FIFLGPTGVGKTELSKAL 564
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +FG++ +I +D+S + NS+ KL G V Y + +
Sbjct: 565 AEAMFGDENSIIRIDMSE---YMESNSV----------SKLIGSPPGYVGYDDGGQLTEA 611
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
R KPYSVV L++++KA + + L + + G+ TDS+G+ V+ I + TS + G
Sbjct: 612 VRRKPYSVVLLDEIEKAHQDVF-NILLQIMEDGRLTDSHGKVVNFKNTIVIMTSNV--GA 668
Query: 860 HSVHPQ 865
H + Q
Sbjct: 669 HQIKKQ 674
>gi|443622873|ref|ZP_21107390.1| putative Clp protease ATP binding subunit [Streptomyces
viridochromogenes Tue57]
gi|443343606|gb|ELS57731.1| putative Clp protease ATP binding subunit [Streptomyces
viridochromogenes Tue57]
Length = 849
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L E+V QDEA+ +S AV R R G N G +L FLGP VGK ++A ALAE
Sbjct: 540 LHERVVGQDEAVRVVSDAVLRSRAGL---ASPNRPIGSFL-FLGPTGVGKTELARALAEA 595
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG++ +++ +D+S Q + + + + G+ + + R PYS++
Sbjct: 596 LFGSEERMVRLDMSEYQERHTVSRLIGAPP-GYVGHEEAGQ-----LTEVVRRHPYSLLL 649
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G+ TDS GR V + + V TS +
Sbjct: 650 LDEVEK-AHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNL 694
>gi|410454418|ref|ZP_11308357.1| Class III stress response-related ATPase, ClpC [Bacillus
bataviensis LMG 21833]
gi|409932233|gb|EKN69200.1| Class III stress response-related ATPase, ClpC [Bacillus
bataviensis LMG 21833]
Length = 813
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++ Q+EA+ +S+AV R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHSRIIGQEEAVIAVSKAVRRARAGLKDPKRPIGS-------FVFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AEAMFGDEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 VILLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNV 660
>gi|239826400|ref|YP_002949024.1| ATPase AAA [Geobacillus sp. WCH70]
gi|239806693|gb|ACS23758.1| ATPase AAA-2 domain protein [Geobacillus sp. WCH70]
Length = 725
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 17/174 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA+KV Q+EA+ +++A+ R R G R +GS F+GP VGK
Sbjct: 424 KHLEENLAKKVIGQEEAVKKVAKAIRRSRAGLKAKHRPIGS-------FLFVGPTGVGKT 476
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++A LAE +FG+K +I +D+S + + G + ++
Sbjct: 477 ELAKTLAEELFGSKDAMIRLDMSEYMEKHSVSKLIG------SPPGYVGHEEAGQLTEKV 530
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
R PYS++ L++++K A P VQ + + G+ TDS GR VS + +ATS
Sbjct: 531 RRNPYSIILLDEIEK-AHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATSN 583
>gi|386844396|ref|YP_006249454.1| chaperone [Streptomyces hygroscopicus subsp. jinggangensis 5008]
gi|374104697|gb|AEY93581.1| chaperone [Streptomyces hygroscopicus subsp. jinggangensis 5008]
gi|451797690|gb|AGF67739.1| chaperone [Streptomyces hygroscopicus subsp. jinggangensis TL01]
Length = 837
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 17/166 (10%)
Query: 693 KVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
++ QDEA+ +SQAV R R G G R VGS FLGP VGK ++A LA +
Sbjct: 538 RIVGQDEAVTAVSQAVRRNRAGMGDPRRPVGS-------FLFLGPTGVGKTELAKTLAAL 590
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG + ++I D+S Q + + + G+ + ++ R +PYSVV
Sbjct: 591 LFGEEDRMIRFDMSEFQEKHTVARLVGAPP-GYVGYEEAGQ-----LTEKVRRRPYSVVL 644
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P V ++L + + G+ TD+ GR V + + TS I
Sbjct: 645 FDEVEK-AHPDVFNTLLQILDDGRLTDAQGRTVDFRHCVVIMTSNI 689
>gi|418028422|ref|ZP_12666988.1| Negative regulator of genetic competence clpC/mecB [Streptococcus
thermophilus CNCM I-1630]
gi|354687252|gb|EHE87352.1| Negative regulator of genetic competence clpC/mecB [Streptococcus
thermophilus CNCM I-1630]
Length = 472
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 161 DSKRYLNLESELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 213
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ L+ D+S F +L G V
Sbjct: 214 GVGKTELAKALAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 260
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 261 GYDEGGELTEKVRNKPYSVLLFDEIEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 319
Query: 849 FVATSTI 855
+ TS +
Sbjct: 320 IIMTSNL 326
>gi|325263684|ref|ZP_08130418.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
D5]
gi|324031393|gb|EGB92674.1| negative regulator of genetic competence ClpC/MecB [Clostridium sp.
D5]
Length = 814
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 33/221 (14%)
Query: 644 FSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICT 703
F ++ V+EG +VV + + D K L L ++V Q+EA+
Sbjct: 462 FQKKTASHHPEVTEGDIADVVSAWTKVPVQKLAESDTDRLKKLEQVLHKRVVGQEEAVNA 521
Query: 704 ISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHV 760
+++AV R R+G R +GS FLGP VGK +++ ALAE +FGN+ +I V
Sbjct: 522 VARAVKRGRVGLKDPKRPIGS-------FLFLGPTGVGKTELSKALAEAMFGNEESMIRV 574
Query: 761 DVS--------SEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLED 812
D+S S+ S P + + D + R+ PYSV+ ++
Sbjct: 575 DMSEYMEKHSVSKMIGSPPGYVGHEEGGQLSD--------------QVRTHPYSVILFDE 620
Query: 813 LDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
++K A P V + L + + G TDS GR V + + TS
Sbjct: 621 VEK-AHPDVFNILLQVLDDGHITDSQGRKVDFCNTVIIMTS 660
>gi|323490586|ref|ZP_08095791.1| Class III stress response-related ATPase, ClpC [Planococcus
donghaensis MPA1U2]
gi|323395678|gb|EGA88519.1| Class III stress response-related ATPase, ClpC [Planococcus
donghaensis MPA1U2]
Length = 820
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +IS+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 507 LHNRVIGQNEAVTSISKAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 559
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 560 AESMFGDEEAMIRIDM-SEYMERHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 613
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 614 VVLLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRRVDFRNTVIIMTSNV 661
>gi|335045358|ref|ZP_08538381.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 108 str. F0425]
gi|333759144|gb|EGL36701.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 108 str. F0425]
Length = 818
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 87/178 (48%), Gaps = 23/178 (12%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L L +V Q+EA+ ++QA+ R R+G R +GS FLGP VGK
Sbjct: 503 KNLENLLHTRVIGQNEAVHAVAQAIKRGRVGLKDPKRPIGS-------FMFLGPTGVGKT 555
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIY 797
+++ ALAE VFG++ LI VD+S + + G V D +
Sbjct: 556 ELSKALAETVFGSEQNLIRVDMSEYMEKYSVSKMIGSPP---------GYVGYDEGGQLS 606
Query: 798 QEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++ R PYSV+ ++++K A P V + L + + G TDS GR VS I + TS +
Sbjct: 607 EKVRRNPYSVILFDEIEK-AHPDVLNILLQVLDDGHITDSQGRKVSFKNTIIIMTSNV 663
>gi|418965095|ref|ZP_13516881.1| Clp amino terminal domain protein [Streptococcus constellatus
subsp. constellatus SK53]
gi|383343636|gb|EID21813.1| Clp amino terminal domain protein [Streptococcus constellatus
subsp. constellatus SK53]
Length = 809
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q+EAI IS+A+ R + G + R +GS FLGP
Sbjct: 498 DAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDETALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R++PYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 598 GYEEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|408402528|ref|YP_006860492.1| negative regulator of genetic competence clpC/mecB [Streptococcus
dysgalactiae subsp. equisimilis RE378]
gi|407968757|dbj|BAM61995.1| negative regulator of genetic competence clpC/mecB [Streptococcus
dysgalactiae subsp. equisimilis RE378]
Length = 814
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V Q++A+ IS+A+ R RIG R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQEDAVSAISRAIRRNQSGIRIGK-RPIGS-------FMFLGP 554
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F + LI D+S F +L G
Sbjct: 555 TGVGKTELAKALAEVLFDDASALIRFDMSEYME-------------KFAASRLNGAPPGY 601
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 602 VGYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGMLTDSRGRKVDFSNT 660
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 661 IIIMTSNL 668
>gi|297203464|ref|ZP_06920861.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
gi|297148417|gb|EDY60364.2| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
Length = 847
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 542 LHERVVGQDEAVRVVSDAVLRSRAGLASPDRPIGS-------FLFLGPTGVGKTELARAL 594
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +++ +D+S Q + + + + G+ + + R PYS
Sbjct: 595 AESLFGSEERMVRLDMSEYQERHTVSRLVGAPP-GYVGHEEAGQ-----LTEVVRRHPYS 648
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
++ L++++K A P V + L + + G+ TDS GR V + + V TS + G ++ +
Sbjct: 649 LLLLDEVEK-AHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNL--GSEAITRRG 705
Query: 867 TPVKFSEEIILGAKRWQM 884
+ F + A+R Q+
Sbjct: 706 AGIGFGSQSGEEARREQI 723
>gi|408790713|ref|ZP_11202327.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Lactobacillus
florum 2F]
gi|408519986|gb|EKK20092.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Lactobacillus
florum 2F]
Length = 672
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 31/215 (14%)
Query: 649 SAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAV 708
S + + ++E V++ + T E + + K L L + V Q EA+ +++A+
Sbjct: 340 SNQNNTITEKDMQQVIEEMTDIPVGTLEEQEKQQLKELAPQLEQHVIGQPEAVQQVTKAI 399
Query: 709 SRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSE 765
R R+G +GR +GS F+GP VGK ++A LA +FG+K LI D+S
Sbjct: 400 QRNRLGFNKSGRPIGS-------FLFVGPTGVGKTELAKQLANQLFGSKDALIRFDMSE- 451
Query: 766 QRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQEFRSKPYSVVFLEDLDKAAD 818
+P S+ KL G V Y + ++ R PYS++ L++++K A
Sbjct: 452 --YREPQSV----------AKLIGAAPGYVGYDEAGQLTEKVRRHPYSLILLDEVEK-AH 498
Query: 819 PIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
P V + + + G+ TDS GR VS + + TS
Sbjct: 499 PDVLHTFLQVLDDGRLTDSQGRTVSFKDTVIIMTS 533
>gi|339640013|ref|ZP_08661457.1| chaperone protein ClpB [Streptococcus sp. oral taxon 056 str.
F0418]
gi|339453282|gb|EGP65897.1| chaperone protein ClpB [Streptococcus sp. oral taxon 056 str.
F0418]
Length = 812
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEAI IS+A+ R + G + R +GS FLGP
Sbjct: 498 DAKKYLHLEKELHQRVIGQDEAISAISRAIRRNQSGIRSHKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE +F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAETLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R++PYSV+ ++++K A P + + L + + G TDS GR + S I
Sbjct: 598 GYEEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSKGRKIDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|206895288|ref|YP_002247181.1| negative regulator of genetic competence ClpC/mecB
[Coprothermobacter proteolyticus DSM 5265]
gi|206737905|gb|ACI16983.1| negative regulator of genetic competence ClpC/mecB
[Coprothermobacter proteolyticus DSM 5265]
Length = 826
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 19/174 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEAI ++QA+ R R G R +GS FLGP VGK ++A AL
Sbjct: 531 LHRRVVGQDEAISAVAQAIRRARTGLKDPKRPIGS-------FIFLGPTGVGKTELAKAL 583
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE++FG++ L+ D+S + + + + G+ + + R +PYS
Sbjct: 584 AEVLFGDESALVRFDMSEYMEKHTVSRLIGSPP-GYVGYEEGGQ-----LTEAVRRRPYS 637
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKH 860
V+ ++++K A P + + L + + G+ TD+ GR V I + TS + G H
Sbjct: 638 VILFDEIEK-AHPDIHNLLLQVLDDGRLTDAKGRIVDFKNTIIIMTSNL--GSH 688
>gi|408355460|ref|YP_006843991.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amphibacillus
xylanus NBRC 15112]
gi|407726231|dbj|BAM46229.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amphibacillus
xylanus NBRC 15112]
Length = 811
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V Q EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE
Sbjct: 512 RVIGQSEAVTAVSKAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARALAEA 564
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG++ +I +D+ SE S + + G+ + ++ RSKPYSVV
Sbjct: 565 MFGDEDAMIRIDM-SEYMEKHTTSRLVGSPPGYVGYEEGGQ-----LTEKVRSKPYSVVL 618
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 619 LDEIEK-AHPEVFNILLQVLEDGRLTDSKGRLVDFRNTVLIMTSNV 663
>gi|431083304|ref|ZP_19495875.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1604]
gi|430565125|gb|ELB04294.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1604]
Length = 828
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 19/167 (11%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL+E+
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKDPDRPIGS-------FMFLGPTGVGKTELAKALSEV 573
Query: 750 VFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI VD+S ++ S I D G L + I R KPYSV+
Sbjct: 574 MFGSEDALIRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RQKPYSVI 626
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G TDS GR V I + TS I
Sbjct: 627 LLDEVEK-AHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|293572753|ref|ZP_06683707.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E980]
gi|431739148|ref|ZP_19528087.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1972]
gi|291607103|gb|EFF36471.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E980]
gi|430596281|gb|ELB34120.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1972]
Length = 828
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 19/167 (11%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL+E+
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKDPDRPIGS-------FMFLGPTGVGKTELAKALSEV 573
Query: 750 VFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI VD+S ++ S I D G L + I R KPYSV+
Sbjct: 574 MFGSEDALIRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RQKPYSVI 626
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G TDS GR V I + TS I
Sbjct: 627 LLDEVEK-AHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|430842573|ref|ZP_19460485.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1007]
gi|430492797|gb|ELA69138.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1007]
Length = 828
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 19/167 (11%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL+E+
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKDPDRPIGS-------FMFLGPTGVGKTELAKALSEV 573
Query: 750 VFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI VD+S ++ S I D G L + I R KPYSV+
Sbjct: 574 MFGSEDALIRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RQKPYSVI 626
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G TDS GR V I + TS I
Sbjct: 627 LLDEVEK-AHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|431116708|ref|ZP_19497974.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1613]
gi|430568488|gb|ELB07535.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1613]
Length = 828
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 19/167 (11%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL+E+
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKDPDRPIGS-------FMFLGPTGVGKTELAKALSEV 573
Query: 750 VFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI VD+S ++ S I D G L + I R KPYSV+
Sbjct: 574 MFGSEDALIRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RQKPYSVI 626
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G TDS GR V I + TS I
Sbjct: 627 LLDEVEK-AHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|431601052|ref|ZP_19522537.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1861]
gi|431742386|ref|ZP_19531280.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2039]
gi|430590209|gb|ELB28294.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1861]
gi|430600388|gb|ELB38041.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2039]
Length = 828
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 19/167 (11%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL+E+
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKDPDRPIGS-------FMFLGPTGVGKTELAKALSEV 573
Query: 750 VFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI VD+S ++ S I D G L + I R KPYSV+
Sbjct: 574 MFGSEDALIRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RQKPYSVI 626
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G TDS GR V I + TS I
Sbjct: 627 LLDEVEK-AHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|359687498|ref|ZP_09257499.1| ATP-dependent protease ClpA [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418750586|ref|ZP_13306872.1| negative regulator of genetic competence ClpC/MecB [Leptospira
licerasiae str. MMD4847]
gi|418755991|ref|ZP_13312179.1| negative regulator of genetic competence ClpC/MecB [Leptospira
licerasiae serovar Varillal str. VAR 010]
gi|384115662|gb|EIE01919.1| negative regulator of genetic competence ClpC/MecB [Leptospira
licerasiae serovar Varillal str. VAR 010]
gi|404273189|gb|EJZ40509.1| negative regulator of genetic competence ClpC/MecB [Leptospira
licerasiae str. MMD4847]
Length = 846
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 27/174 (15%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEAI I+++V R R G R GS FLGP VGK ++A AL
Sbjct: 517 LKQRVVGQDEAIEKIAKSVRRARTGFKAERRPTGS-------FIFLGPTGVGKTELAKAL 569
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQN-----IDFCDCKLRGKVLVDYIYQEFR 801
AE +FG++ ++ VD+S +P+++ + + D G L +++ R
Sbjct: 570 AEFLFGDQDAMLRVDMSE---YMEPHAVSRLIGAPPGYVGYDD----GGQLTEFV----R 618
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYS++ L++++KA I + L + + G TD+ GR V+ I + TS I
Sbjct: 619 KKPYSIILLDEIEKAHHDIF-NVLLQVMEEGNLTDTKGRKVNFRDAIIIMTSNI 671
>gi|116871616|ref|YP_848397.1| ClpB ATPase [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116740494|emb|CAK19614.1| ClpB ATPase [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 820
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD A+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 505 LHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 557
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +FG++ +I +D+S F +L G V Y + ++
Sbjct: 558 AESMFGDEDSMIRIDMSEYME-------------KFSTARLVGAPPGYVGYEEGGQLTEK 604
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 605 VRQKPYSVVLLDEIEK-AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|423071440|ref|ZP_17060214.1| hypothetical protein HMPREF9177_01531 [Streptococcus intermedius
F0413]
gi|355363914|gb|EHG11649.1| hypothetical protein HMPREF9177_01531 [Streptococcus intermedius
F0413]
Length = 809
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q+EAI IS+A+ R + G + R +GS FLGP
Sbjct: 498 DAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGS-------FLFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDETALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R++PYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 598 GYEEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 656
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V V+F E
Sbjct: 657 IIMTSNLGATSLRDDKTVGFGARDVRFDHE 686
>gi|406669840|ref|ZP_11077103.1| hypothetical protein HMPREF9707_01006 [Facklamia ignava CCUG 37419]
gi|405581810|gb|EKB55819.1| hypothetical protein HMPREF9707_01006 [Facklamia ignava CCUG 37419]
Length = 832
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 23/176 (13%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L E+V QDEA+ +S+A+ R G R +GS FLGP VGK ++
Sbjct: 526 LEAELHERVIGQDEAVSAVSRAIRRAYSGLKNPNRPIGS-------FLFLGPTGVGKTEL 578
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQE 799
A ALA +FG++ +I VD+S + ++ G V D + ++
Sbjct: 579 AKALAATIFGSEDNMIRVDMS---------EYMEKHSVSRLVGSPPGYVGYDEAGQLTEK 629
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R+KPYSV+ L++++K A P V + L +A G TD GR V IF+ TS +
Sbjct: 630 VRNKPYSVILLDEVEK-AHPDVFNILLQAFDDGHMTDGKGRRVDFRNTIFIMTSNL 684
>gi|289433587|ref|YP_003463459.1| ClpC ATPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289169831|emb|CBH26369.1| ClpC ATPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 820
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD A+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 505 LHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 557
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +FG++ +I +D+S F +L G V Y + ++
Sbjct: 558 AESMFGDEDSMIRIDMSEYME-------------KFSTARLVGAPPGYVGYEEGGQLTEK 604
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 605 VRQKPYSVVLLDEIEK-AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|121999011|ref|YP_001003798.1| ATPase [Halorhodospira halophila SL1]
gi|121590416|gb|ABM62996.1| ATPase AAA-2 domain protein [Halorhodospira halophila SL1]
Length = 870
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 91/178 (51%), Gaps = 21/178 (11%)
Query: 684 KTLRI--ALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKK 741
K LR+ AL E+V QDEAI ++ A+ R R G N G +L FLGP VGK +
Sbjct: 559 KLLRMEEALHERVVGQDEAIGAVANAIRRSRAGLS---DPNRPNGSFL-FLGPTGVGKTE 614
Query: 742 IASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQ 798
+ ALAE +F + ++ +D+S + ++ G V + Y+ +
Sbjct: 615 LCKALAEFLFDTQEAMVRIDMS---------EFMEKHSVARLIGAPPGYVGYEEGGYLTE 665
Query: 799 EFRSKPYSVVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSV+ L++++KA AD V + L + + G+ TDS+GR V + V TS +
Sbjct: 666 HVRRKPYSVILLDEVEKAHAD--VFNVLLQVLDDGRLTDSHGRTVDFRNTVIVMTSNL 721
>gi|1314297|gb|AAC44446.1| ClpC ATPase [Listeria monocytogenes]
Length = 825
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD A+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 510 LHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 562
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +FG++ +I +D+S F +L G V Y + ++
Sbjct: 563 AESMFGDEDSMIRIDMSEYME-------------KFSTARLVGAPPGYVGYEEGGQLTEK 609
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 610 VRQKPYSVVLLDEIEK-AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 664
>gi|16799341|ref|NP_469609.1| endopeptidase Clp ATP-binding chain C [Listeria innocua Clip11262]
gi|423099292|ref|ZP_17086999.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua ATCC 33091]
gi|16412693|emb|CAC95497.1| endopeptidase Clp ATP-binding chain C [Listeria innocua Clip11262]
gi|370794190|gb|EHN61972.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua ATCC 33091]
Length = 820
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD A+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 505 LHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 557
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +FG++ +I +D+S F +L G V Y + ++
Sbjct: 558 AESMFGDEDSMIRIDMSEYME-------------KFSTARLVGAPPGYVGYEEGGQLTEK 604
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 605 VRQKPYSVVLLDEIEK-AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|255520324|ref|ZP_05387561.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes FSL
J1-175]
Length = 819
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD A+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 505 LHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 557
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +FG++ +I +D+S F +L G V Y + ++
Sbjct: 558 AESMFGDEDSMIRIDMSEYME-------------KFSTARLVGAPPGYVGYEEGGQLTEK 604
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 605 VRQKPYSVVLLDEIEK-AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|424786948|ref|ZP_18213719.1| istB-like ATP binding family protein [Streptococcus intermedius
BA1]
gi|422114199|gb|EKU17906.1| istB-like ATP binding family protein [Streptococcus intermedius
BA1]
Length = 809
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q+EAI IS+A+ R + G + R +GS FLGP
Sbjct: 498 DAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGS-------FLFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDETALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R++PYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 598 GYEEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 656
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V V+F E
Sbjct: 657 IIMTSNLGATSLRDDKTVGFGARDVRFDHE 686
>gi|355574982|ref|ZP_09044618.1| hypothetical protein HMPREF1008_00595 [Olsenella sp. oral taxon 809
str. F0356]
gi|354818458|gb|EHF02950.1| hypothetical protein HMPREF1008_00595 [Olsenella sp. oral taxon 809
str. F0356]
Length = 863
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 20/187 (10%)
Query: 689 ALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAE 748
AL ++V QDEA+ +S+A+ R R + + G FLGP VGK ++A +LAE
Sbjct: 524 ALHQRVVGQDEAVTKVSKAIRRSR----SPLKDPRRPGGSFIFLGPSGVGKTELAKSLAE 579
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPY 805
+FG++ LI D+S + ++ G V D + + R +PY
Sbjct: 580 FLFGSEDALISFDMS---------EFMEKHSVSKLVGAPPGYVGYDEGGELTKAVRRRPY 630
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQ 865
SVV ++++K A P V + L + + G+ TD GR V S + + TS I G + Q
Sbjct: 631 SVVLFDEIEK-AHPDVFNILLQILDEGRLTDGQGRTVDFSNTVIIMTSNI--GAREI-AQ 686
Query: 866 TTPVKFS 872
T P+ FS
Sbjct: 687 TAPMGFS 693
>gi|312137786|ref|YP_004005122.1| DNA binding ATP-dependent peptidase [Rhodococcus equi 103S]
gi|325675054|ref|ZP_08154740.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
equi ATCC 33707]
gi|311887125|emb|CBH46434.1| putative DNA binding ATP-dependent peptidase [Rhodococcus equi
103S]
gi|325554015|gb|EGD23691.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
equi ATCC 33707]
Length = 826
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 88/173 (50%), Gaps = 17/173 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L +V Q+EA+ +++AV R R G R +GS FLGP VGK +
Sbjct: 512 LEDVLHARVIGQNEAVTAVAEAVRRSRAGLSDPNRPIGS-------FLFLGPTGVGKTET 564
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A ALAE VFG++G++I D+S Q + + + + G+ L D + R
Sbjct: 565 AKALAEAVFGDEGRMIRFDMSEFQEKHTVSRLVGAPP-GYVGYEEAGQ-LTDKV----RR 618
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+PYSVV ++++K A P V + L + + G+ TD+ GR V I + TS I
Sbjct: 619 QPYSVVLFDEVEK-AHPDVFNVLLQLLDDGRVTDAQGRTVDFKNTIVILTSNI 670
>gi|422408257|ref|ZP_16485218.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes FSL F2-208]
gi|313611199|gb|EFR86009.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes FSL F2-208]
Length = 820
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD A+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 505 LHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 557
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +FG++ +I +D+S F +L G V Y + ++
Sbjct: 558 AESMFGDEDSMIRIDMSEYME-------------KFSTARLVGAPPGYVGYEEGGQLTEK 604
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 605 VRQKPYSVVLLDEIEK-AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|295694806|ref|YP_003588044.1| ATPase AAA-2 domain-containing protein [Kyrpidia tusciae DSM 2912]
gi|295410408|gb|ADG04900.1| ATPase AAA-2 domain protein [Kyrpidia tusciae DSM 2912]
Length = 814
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 20/186 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 505 LHKRVIGQDEAVEAVSRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 557
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ ++ +D+S + + + + G+ + ++ R KPYS
Sbjct: 558 AEAMFGDENAVVRIDMSEYMERHTTSRLIGAPP-GYVGYEEGGQ-----LTEKIRRKPYS 611
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
VV L++++K A P V + L + + G+ TD GR V + + TS + G S+ +
Sbjct: 612 VVLLDEIEK-AHPEVFNILLQVLDDGRLTDGKGRTVDFRNTVIIMTSNV--GAQSIR-RG 667
Query: 867 TPVKFS 872
P+ F+
Sbjct: 668 GPLGFA 673
>gi|251778894|ref|ZP_04821814.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243083209|gb|EES49099.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 814
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 23/181 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q EA+ +I++AV R R+G R +G+ FLGP VGK +++ AL
Sbjct: 512 LEKRVIGQTEAVESIAKAVRRARVGIKDPNRPIGT-------FIFLGPTGVGKTELSKAL 564
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKP 804
AE +FG++ +I +D+S + + + I + D G L + + R KP
Sbjct: 565 AEAMFGDENSIIRIDMSEYMESNSVSKLIGSPPGYIGYDD----GGQLTEAV----RRKP 616
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHP 864
YSVV L++++KA + + L + + G+ TDS+G+ V+ I + TS + G H +
Sbjct: 617 YSVVLLDEIEKAHQDVF-NILLQIMEDGRLTDSHGKVVNFKNTIVIMTSNV--GAHQIKK 673
Query: 865 Q 865
Q
Sbjct: 674 Q 674
>gi|217965681|ref|YP_002351359.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes HCC23]
gi|290892627|ref|ZP_06555620.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
J2-071]
gi|386006961|ref|YP_005925239.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L99]
gi|386025542|ref|YP_005946318.1| Clp endopeptidase ATP-binding subunit [Listeria monocytogenes M7]
gi|404406685|ref|YP_006689400.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2376]
gi|217334951|gb|ACK40745.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes HCC23]
gi|290557936|gb|EFD91457.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
J2-071]
gi|307569771|emb|CAR82950.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L99]
gi|336022123|gb|AEH91260.1| Clp endopeptidase ATP-binding subunit; putative ClpB [Listeria
monocytogenes M7]
gi|404240834|emb|CBY62234.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2376]
Length = 820
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD A+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 505 LHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 557
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +FG++ +I +D+S F +L G V Y + ++
Sbjct: 558 AESMFGDEDSMIRIDMSEYME-------------KFSTARLVGAPPGYVGYEEGGQLTEK 604
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 605 VRQKPYSVVLLDEIEK-AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|69247808|ref|ZP_00604499.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal
[Enterococcus faecium DO]
gi|257880379|ref|ZP_05660032.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,230,933]
gi|257882375|ref|ZP_05662028.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,502]
gi|257886165|ref|ZP_05665818.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,501]
gi|257891707|ref|ZP_05671360.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,410]
gi|257894046|ref|ZP_05673699.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,408]
gi|260559344|ref|ZP_05831525.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium C68]
gi|293559798|ref|ZP_06676317.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1162]
gi|293568579|ref|ZP_06679897.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1071]
gi|294622845|ref|ZP_06701791.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium U0317]
gi|314939248|ref|ZP_07846500.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133a04]
gi|314942545|ref|ZP_07849382.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133C]
gi|314953692|ref|ZP_07856573.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133A]
gi|314992426|ref|ZP_07857851.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133B]
gi|314998259|ref|ZP_07863131.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133a01]
gi|383330163|ref|YP_005356047.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium Aus0004]
gi|389869868|ref|YP_006377291.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecium DO]
gi|406581106|ref|ZP_11056282.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD4E]
gi|406583376|ref|ZP_11058453.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD3E]
gi|406585708|ref|ZP_11060684.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD2E]
gi|406591079|ref|ZP_11065389.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD1E]
gi|415898304|ref|ZP_11551253.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E4453]
gi|416141432|ref|ZP_11599392.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E4452]
gi|424791936|ref|ZP_18218227.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium V689]
gi|424812991|ref|ZP_18238226.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium S447]
gi|424824694|ref|ZP_18249684.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R501]
gi|424854778|ref|ZP_18279131.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R499]
gi|424901262|ref|ZP_18324789.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R497]
gi|424951349|ref|ZP_18366460.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R496]
gi|424955143|ref|ZP_18370000.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R494]
gi|424957912|ref|ZP_18372608.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R446]
gi|424959403|ref|ZP_18373989.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1986]
gi|424962682|ref|ZP_18376999.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1190]
gi|424966466|ref|ZP_18380263.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1140]
gi|424971827|ref|ZP_18385234.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1139]
gi|424974907|ref|ZP_18388113.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1137]
gi|424977848|ref|ZP_18390823.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1123]
gi|424980389|ref|ZP_18393185.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV99]
gi|424984427|ref|ZP_18396961.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV69]
gi|424986456|ref|ZP_18398876.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV38]
gi|424991644|ref|ZP_18403782.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV26]
gi|424995738|ref|ZP_18407598.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV168]
gi|424997761|ref|ZP_18409500.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV165]
gi|425000862|ref|ZP_18412406.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV161]
gi|425003407|ref|ZP_18414777.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV102]
gi|425007446|ref|ZP_18418576.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV1]
gi|425011680|ref|ZP_18422561.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium E422]
gi|425014419|ref|ZP_18425095.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium E417]
gi|425016510|ref|ZP_18427071.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C621]
gi|425020613|ref|ZP_18430912.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C497]
gi|425030265|ref|ZP_18435456.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C1904]
gi|425032233|ref|ZP_18437303.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 515]
gi|425034205|ref|ZP_18439111.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 514]
gi|425040444|ref|ZP_18444914.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 513]
gi|425042601|ref|ZP_18446919.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 511]
gi|425045994|ref|ZP_18450048.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 510]
gi|425047301|ref|ZP_18451266.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 509]
gi|425052075|ref|ZP_18455707.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 506]
gi|425056615|ref|ZP_18460065.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 505]
gi|425057382|ref|ZP_18460802.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 504]
gi|425061606|ref|ZP_18464822.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 503]
gi|430824196|ref|ZP_19442762.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0120]
gi|430832437|ref|ZP_19450482.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0333]
gi|430834943|ref|ZP_19452944.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0679]
gi|430837293|ref|ZP_19455266.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0680]
gi|430840077|ref|ZP_19458011.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0688]
gi|430845235|ref|ZP_19463130.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1050]
gi|430847994|ref|ZP_19465826.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1133]
gi|430853898|ref|ZP_19471623.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1258]
gi|430856480|ref|ZP_19474169.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1392]
gi|430859078|ref|ZP_19476695.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1552]
gi|430867550|ref|ZP_19482502.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1574]
gi|431310560|ref|ZP_19508729.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1626]
gi|431385858|ref|ZP_19511499.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1627]
gi|431447323|ref|ZP_19513835.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1630]
gi|431509374|ref|ZP_19515791.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1634]
gi|431564033|ref|ZP_19519777.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1731]
gi|431744703|ref|ZP_19533570.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2071]
gi|431749761|ref|ZP_19538495.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2297]
gi|431756043|ref|ZP_19544684.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2883]
gi|431760983|ref|ZP_19549573.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3346]
gi|431768408|ref|ZP_19556846.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1321]
gi|431771921|ref|ZP_19560293.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1644]
gi|431774755|ref|ZP_19563059.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2369]
gi|431776327|ref|ZP_19564591.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2560]
gi|431780287|ref|ZP_19568470.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E4389]
gi|431783284|ref|ZP_19571404.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E6012]
gi|431784239|ref|ZP_19572282.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E6045]
gi|447913938|ref|YP_007395350.1| ATP-dependent Clp protease [Enterococcus faecium NRRL B-2354]
gi|68194693|gb|EAN09176.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal
[Enterococcus faecium DO]
gi|257814607|gb|EEV43365.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,230,933]
gi|257818033|gb|EEV45361.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,502]
gi|257822021|gb|EEV49151.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,501]
gi|257828067|gb|EEV54693.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,410]
gi|257830425|gb|EEV57032.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,231,408]
gi|260074443|gb|EEW62764.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium C68]
gi|291588721|gb|EFF20551.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1071]
gi|291597704|gb|EFF28850.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium U0317]
gi|291606243|gb|EFF35658.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1162]
gi|313587768|gb|EFR66613.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133a01]
gi|313593034|gb|EFR71879.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133B]
gi|313594316|gb|EFR73161.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133A]
gi|313598694|gb|EFR77539.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133C]
gi|313641454|gb|EFS06034.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0133a04]
gi|364090118|gb|EHM32745.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E4453]
gi|364090179|gb|EHM32800.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E4452]
gi|378939857|gb|AFC64929.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium Aus0004]
gi|388535117|gb|AFK60309.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecium DO]
gi|402916532|gb|EJX37395.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium S447]
gi|402918364|gb|EJX39066.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium V689]
gi|402925483|gb|EJX45619.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R501]
gi|402930487|gb|EJX50137.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R496]
gi|402930877|gb|EJX50491.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R497]
gi|402932346|gb|EJX51863.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R499]
gi|402934828|gb|EJX54130.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R494]
gi|402942272|gb|EJX60882.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium R446]
gi|402950574|gb|EJX68565.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1986]
gi|402951458|gb|EJX69385.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1190]
gi|402955245|gb|EJX72790.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1137]
gi|402956398|gb|EJX73862.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1140]
gi|402957349|gb|EJX74742.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1139]
gi|402964228|gb|EJX81031.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium P1123]
gi|402966590|gb|EJX83211.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV99]
gi|402968933|gb|EJX85383.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV69]
gi|402976265|gb|EJX92168.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV26]
gi|402976426|gb|EJX92321.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV168]
gi|402976494|gb|EJX92385.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV38]
gi|402985370|gb|EJY00582.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV165]
gi|402988242|gb|EJY03259.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV161]
gi|402992086|gb|EJY06817.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV102]
gi|402994992|gb|EJY09481.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium ERV1]
gi|402995962|gb|EJY10377.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium E422]
gi|402998773|gb|EJY13015.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium E417]
gi|403003718|gb|EJY17586.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C1904]
gi|403006923|gb|EJY20532.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C621]
gi|403008908|gb|EJY22389.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium C497]
gi|403012836|gb|EJY26008.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 513]
gi|403013627|gb|EJY26707.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 515]
gi|403020968|gb|EJY33454.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 514]
gi|403022956|gb|EJY35272.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 511]
gi|403025755|gb|EJY37803.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 510]
gi|403031466|gb|EJY43069.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 505]
gi|403034442|gb|EJY45892.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 509]
gi|403035890|gb|EJY47269.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 506]
gi|403040585|gb|EJY51651.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 504]
gi|403040938|gb|EJY51984.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium 503]
gi|404453066|gb|EKA00174.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD4E]
gi|404456791|gb|EKA03416.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD3E]
gi|404462243|gb|EKA08030.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD2E]
gi|404468315|gb|EKA13311.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
sp. GMD1E]
gi|430441368|gb|ELA51479.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0120]
gi|430479922|gb|ELA57125.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0333]
gi|430484767|gb|ELA61725.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0679]
gi|430487530|gb|ELA64262.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0680]
gi|430490068|gb|ELA66619.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0688]
gi|430495785|gb|ELA71917.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1050]
gi|430536070|gb|ELA76451.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1133]
gi|430539963|gb|ELA80193.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1258]
gi|430544388|gb|ELA84424.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1552]
gi|430544440|gb|ELA84470.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1392]
gi|430550137|gb|ELA89943.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1574]
gi|430579192|gb|ELB17722.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1626]
gi|430580836|gb|ELB19298.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1627]
gi|430585539|gb|ELB23819.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1630]
gi|430586793|gb|ELB25040.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1634]
gi|430589700|gb|ELB27822.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1731]
gi|430605012|gb|ELB42430.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2071]
gi|430611105|gb|ELB48221.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2297]
gi|430615898|gb|ELB52832.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2883]
gi|430623001|gb|ELB59709.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3346]
gi|430629236|gb|ELB65646.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1321]
gi|430632559|gb|ELB68778.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1644]
gi|430633491|gb|ELB69653.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2369]
gi|430640340|gb|ELB76184.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E4389]
gi|430641177|gb|ELB76992.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2560]
gi|430645560|gb|ELB81069.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E6012]
gi|430649954|gb|ELB85318.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E6045]
gi|445189647|gb|AGE31289.1| ATP-dependent Clp protease [Enterococcus faecium NRRL B-2354]
Length = 830
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 19/167 (11%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL+E+
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKDPDRPIGS-------FMFLGPTGVGKTELAKALSEV 575
Query: 750 VFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI VD+S ++ S I D G L + I R KPYSV+
Sbjct: 576 MFGSEDALIRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RQKPYSVI 628
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G TDS GR V I + TS I
Sbjct: 629 LLDEVEK-AHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|450105623|ref|ZP_21859990.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans SF14]
gi|449224255|gb|EMC23901.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans SF14]
Length = 813
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 93/188 (49%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R++PYSV+ ++++K A P + + L + + G TDS GR V S
Sbjct: 601 VGYEEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|313112631|ref|ZP_07798289.1| ATPase family [Faecalibacterium cf. prausnitzii KLE1255]
gi|310625054|gb|EFQ08351.1| ATPase family [Faecalibacterium cf. prausnitzii KLE1255]
Length = 766
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 114/267 (42%), Gaps = 39/267 (14%)
Query: 636 LIDNKEQCFSGSISAEFDAVSEGTF------HNVVQSSSCSAPHTGEPFDPRDYKTLRIA 689
L+D E C + I AE S+ T H V Q+S GE R K
Sbjct: 404 LVD--EACAAARIRAEQAKQSKPTLMPDDIAHVVAQASGVPVERVGEQERERLDKLEERL 461
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
AE VG Q A+ ++ A+ R R G GR +G+ + FLGP VGK +A AL
Sbjct: 462 NAEIVG-QSRAVAAVAGAIRRSRTGLGEPGRPMGA-------MLFLGPTGVGKTALARAL 513
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
A FG++ L+ D+S Q + G + + R +PYS
Sbjct: 514 AVSWFGSEKALLKFDMSEYQEQHTAARLLGAPP------GYLGHDEGGQLTEAVRRRPYS 567
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
VV ++++K A P +Q+ L + + G+ TD+ GR I + TS + G + Q+
Sbjct: 568 VVLFDEIEK-AHPDIQNILLQILEDGQLTDAMGRKADFRNTIVLLTSNL--GARFLAGQS 624
Query: 867 TPVKF-----------SEEIILGAKRW 882
TP+ F S + I AK+W
Sbjct: 625 TPLGFAAGSEAVFEKQSAQAIEEAKKW 651
>gi|295702321|ref|YP_003595396.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium DSM 319]
gi|294799980|gb|ADF37046.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium DSM 319]
Length = 813
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 507 LHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 559
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 560 AESIFGDEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 613
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V I + TS +
Sbjct: 614 VVLLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNV 661
>gi|288554696|ref|YP_003426631.1| class III stress response-related ATPase [Bacillus pseudofirmus
OF4]
gi|288545856|gb|ADC49739.1| class III stress response-related ATPase [Bacillus pseudofirmus
OF4]
Length = 813
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V Q+EA+ +IS+AV R R G R +GS FLGP VGK ++A A+
Sbjct: 508 LHERVVGQEEAVISISKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAV 560
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 561 AETLFGDEDAVIRIDM-SEYMEKHATSRLVGSPPGYVGHEDGGQ-----LTEKVRRKPYS 614
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TDS GR V + TS +
Sbjct: 615 VILLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRTVDFRNTAIIMTSNV 662
>gi|16802278|ref|NP_463763.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
EGD-e]
gi|47097423|ref|ZP_00234971.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 1/2a F6854]
gi|254828692|ref|ZP_05233379.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
N3-165]
gi|254913462|ref|ZP_05263474.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J2818]
gi|254937957|ref|ZP_05269654.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
F6900]
gi|284800527|ref|YP_003412392.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5578]
gi|284993713|ref|YP_003415481.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5923]
gi|386042568|ref|YP_005961373.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Listeria
monocytogenes 10403S]
gi|386045869|ref|YP_005964201.1| Clp protease ATP binding subunit [Listeria monocytogenes J0161]
gi|386049161|ref|YP_005967152.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
R2-561]
gi|386052509|ref|YP_005970067.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
Finland 1998]
gi|404282664|ref|YP_006683561.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|404409465|ref|YP_006695053.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC5850]
gi|404412333|ref|YP_006697920.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC7179]
gi|405757220|ref|YP_006686496.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2479]
gi|16409597|emb|CAD00759.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
EGD-e]
gi|47014200|gb|EAL05185.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 1/2a F6854]
gi|258601096|gb|EEW14421.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
N3-165]
gi|258610567|gb|EEW23175.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
F6900]
gi|284056089|gb|ADB67030.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5578]
gi|284059180|gb|ADB70119.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5923]
gi|293591469|gb|EFF99803.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J2818]
gi|345532860|gb|AEO02301.1| Clp protease ATP binding subunit [Listeria monocytogenes J0161]
gi|345535802|gb|AEO05242.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Listeria
monocytogenes 10403S]
gi|346423007|gb|AEO24532.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
R2-561]
gi|346645160|gb|AEO37785.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
Finland 1998]
gi|404229291|emb|CBY50695.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC5850]
gi|404232166|emb|CBY53569.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|404235102|emb|CBY56504.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2479]
gi|404238032|emb|CBY59433.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC7179]
gi|441469781|emb|CCQ19536.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes]
gi|441472917|emb|CCQ22671.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes N53-1]
Length = 820
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD A+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 505 LHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 557
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +FG++ +I +D+S F +L G V Y + ++
Sbjct: 558 AESMFGDEDSMIRIDMSEYME-------------KFSTARLVGAPPGYVGYEEGGQLTEK 604
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 605 VRQKPYSVVLLDEIEK-AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|418472966|ref|ZP_13042612.1| Clp protease ATP binding subunit [Streptomyces coelicoflavus
ZG0656]
gi|371546359|gb|EHN74873.1| Clp protease ATP binding subunit [Streptomyces coelicoflavus
ZG0656]
Length = 842
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 534 LHERVVGQDEAVRVVSDAVLRSRAGLSSPDRPIGS-------FLFLGPTGVGKTELARAL 586
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +++ +D+S Q + + + + G+ + + R PYS
Sbjct: 587 AEALFGSEDRMVRLDMSEYQERHTVSRLVGAPP-GYVGHEEAGQ-----LTEVVRRHPYS 640
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++ L++++K A P V + L + + G+ TDS GR V S + V TS +
Sbjct: 641 LLLLDEVEK-AHPDVFNILLQVLDDGRLTDSQGRTVDFSNAVVVMTSNL 688
>gi|384049297|ref|YP_005497314.1| Class III stress response ATPase, ClpC [Bacillus megaterium
WSH-002]
gi|345446988|gb|AEN92005.1| Class III stress response ATPase, ClpC [Bacillus megaterium
WSH-002]
Length = 813
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 507 LHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 559
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 560 AESIFGDEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 613
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V I + TS +
Sbjct: 614 VVLLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNV 661
>gi|188584788|ref|YP_001916333.1| ATPase AAA [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349475|gb|ACB83745.1| ATPase AAA-2 domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 814
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 23/194 (11%)
Query: 689 ALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASA 745
AL ++V Q+EA+ ++S A+ R R G R +GS FLGP VGK ++A A
Sbjct: 513 ALHQRVVGQEEAVQSVSNAIRRARSGLKDPKRPIGS-------FIFLGPTGVGKTELARA 565
Query: 746 LAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPY 805
LA+++FG++ +I +D+S + + + + G+ + ++ R +PY
Sbjct: 566 LADVLFGDEDAMIRLDMSEYMEKHTVSRLLGSPP-GYVGHEESGQ-----LTEKVRRRPY 619
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTIL------KGK 859
SV+ L++++K A P V ++L + + G+ TD+ GR V + + TS + + K
Sbjct: 620 SVILLDEIEK-AHPEVFNTLLQVLEDGRLTDAKGRTVDFRNTVIIMTSNVGANLIRNESK 678
Query: 860 HSVHPQTTPVKFSE 873
PQT+ + E
Sbjct: 679 VGFKPQTSEDSYKE 692
>gi|294496954|ref|YP_003560654.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium QM B1551]
gi|294346891|gb|ADE67220.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium QM B1551]
Length = 812
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AESIFGDEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V I + TS +
Sbjct: 613 VVLLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNV 660
>gi|422808348|ref|ZP_16856759.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes FSL J1-208]
gi|378753382|gb|EHY63966.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes FSL J1-208]
Length = 820
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD A+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 505 LHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 557
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +FG++ +I +D+S F +L G V Y + ++
Sbjct: 558 AESMFGDEDSMIRIDMSEYME-------------KFSTARLVGAPPGYVGYEEGGQLTEK 604
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 605 VRQKPYSVVLLDEIEK-AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|254853501|ref|ZP_05242849.1| ClpC ATPase [Listeria monocytogenes FSL R2-503]
gi|258606873|gb|EEW19481.1| ClpC ATPase [Listeria monocytogenes FSL R2-503]
Length = 821
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD A+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 505 LHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 557
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +FG++ +I +D+S F +L G V Y + ++
Sbjct: 558 AESMFGDEDSMIRIDMSEYME-------------KFSTARLVGAPPGYVGYEEGGQLTEK 604
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 605 VRQKPYSVVLLDEIEK-AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|46906465|ref|YP_012854.1| ClpC ATPase [Listeria monocytogenes serotype 4b str. F2365]
gi|47093952|ref|ZP_00231688.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 4b H7858]
gi|226222861|ref|YP_002756968.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254825724|ref|ZP_05230725.1| ClpC ATPase [Listeria monocytogenes FSL J1-194]
gi|254932450|ref|ZP_05265809.1| ClpC ATPase [Listeria monocytogenes HPB2262]
gi|300764643|ref|ZP_07074635.1| ClpC ATPase [Listeria monocytogenes FSL N1-017]
gi|386730997|ref|YP_006204493.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
07PF0776]
gi|404279782|ref|YP_006680680.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404285599|ref|YP_006692185.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|405748575|ref|YP_006672041.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
gi|405751449|ref|YP_006674914.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2378]
gi|405754317|ref|YP_006677781.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|406703005|ref|YP_006753359.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L312]
gi|417314282|ref|ZP_12100983.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J1816]
gi|424713097|ref|YP_007013812.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes serotype 4b str. LL195]
gi|424821963|ref|ZP_18246976.1| Chaperone protein ClpB [Listeria monocytogenes str. Scott A]
gi|46879729|gb|AAT03031.1| ClpC ATPase [Listeria monocytogenes serotype 4b str. F2365]
gi|47017673|gb|EAL08470.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 4b H7858]
gi|225875323|emb|CAS04020.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|293584007|gb|EFF96039.1| ClpC ATPase [Listeria monocytogenes HPB2262]
gi|293594968|gb|EFG02729.1| ClpC ATPase [Listeria monocytogenes FSL J1-194]
gi|300514750|gb|EFK41805.1| ClpC ATPase [Listeria monocytogenes FSL N1-017]
gi|328467843|gb|EGF38883.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J1816]
gi|332310643|gb|EGJ23738.1| Chaperone protein ClpB [Listeria monocytogenes str. Scott A]
gi|384389755|gb|AFH78825.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
07PF0776]
gi|404217775|emb|CBY69139.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
gi|404220649|emb|CBY72012.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2378]
gi|404223517|emb|CBY74879.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|404226417|emb|CBY47822.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404244528|emb|CBY02753.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|406360035|emb|CBY66308.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L312]
gi|424012281|emb|CCO62821.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes serotype 4b str. LL195]
Length = 820
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD A+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 505 LHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 557
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +FG++ +I +D+S F +L G V Y + ++
Sbjct: 558 AESMFGDEDSMIRIDMSEYME-------------KFSTARLVGAPPGYVGYEEGGQLTEK 604
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 605 VRQKPYSVVLLDEIEK-AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|431241284|ref|ZP_19503787.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1622]
gi|430571679|gb|ELB10557.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1622]
Length = 830
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 19/167 (11%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL+E+
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKDPDRPIGS-------FMFLGPTGVGKTELAKALSEV 575
Query: 750 VFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI VD+S ++ S I D G L + I R KPYSV+
Sbjct: 576 MFGSEDALIRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RQKPYSVI 628
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G TDS GR V I + TS I
Sbjct: 629 LLDEVEK-AHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|314949476|ref|ZP_07852812.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0082]
gi|313644145|gb|EFS08725.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX0082]
Length = 830
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 19/167 (11%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL+E+
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKDPDRPIGS-------FMFLGPTGVGKTELAKALSEV 575
Query: 750 VFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI VD+S ++ S I D G L + I R KPYSV+
Sbjct: 576 MFGSEDALIRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RQKPYSVI 628
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G TDS GR V I + TS I
Sbjct: 629 LLDEVEK-AHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|347534701|ref|YP_004841371.1| ATP-dependent Clp protease ATP-binding subunit clpE [Lactobacillus
sanfranciscensis TMW 1.1304]
gi|345504757|gb|AEN99439.1| ATP-dependent Clp protease ATP-binding subunit clpE [Lactobacillus
sanfranciscensis TMW 1.1304]
Length = 673
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 31/212 (14%)
Query: 653 DAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWR 712
+ V+E VV+ + E + K L + L + V Q A+ +++A+ R R
Sbjct: 345 NTVTEKDMQQVVEEITSIPVADLEDQEKAQLKNLNVNLEKHVIGQGNAVNKVAKAIQRNR 404
Query: 713 IG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVS 769
+G +GR +GS F+GP VGK ++A LAE +FG+K +I D+S
Sbjct: 405 VGFNKSGRPIGS-------FLFVGPTGVGKTELAKQLAEQLFGSKESIIRFDMSE---YR 454
Query: 770 QPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQ 822
+P SI KL G V Y + ++ R PYS++ L++++KA ++
Sbjct: 455 EPQSI----------AKLIGAAPGYVGYDEAGQLTEKVRRHPYSLILLDEVEKAHSDVLH 504
Query: 823 SSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
+ L + + G+ TDS GR VS + + TS
Sbjct: 505 AFL-QVLDDGRLTDSQGRTVSFKDTVIIMTSN 535
>gi|311029019|ref|ZP_07707109.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus sp. m3-13]
Length = 812
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +S+AV R R G R +GS FLGP VGK ++A AL
Sbjct: 508 LHSRVIGQDEAVKAVSKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 560
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + G+ + ++ R KPYS
Sbjct: 561 AESIFGDEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGYDEGGQ-----LTEKVRRKPYS 614
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 615 VILLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTLVIMTSNV 662
>gi|257899815|ref|ZP_05679468.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium Com15]
gi|257837727|gb|EEV62801.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium Com15]
Length = 828
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 19/167 (11%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL+E+
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKDPDRPIGS-------FMFLGPTGVGKTELAKALSEV 573
Query: 750 VFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI VD+S ++ S I D G L + I R KPYSV+
Sbjct: 574 MFGSEDALIRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RQKPYSVI 626
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G TDS GR V I + TS I
Sbjct: 627 LLDEVEK-AHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|421490666|ref|ZP_15938035.1| Clp amino terminal domain protein [Streptococcus anginosus SK1138]
gi|400372563|gb|EJP25505.1| Clp amino terminal domain protein [Streptococcus anginosus SK1138]
Length = 809
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q+EAI IS+A+ R + G + R +GS FLGP
Sbjct: 498 DAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R++PYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 598 GYEEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|294632198|ref|ZP_06710758.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. e14]
gi|292835531|gb|EFF93880.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. e14]
Length = 856
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 537 LHERVVGQDEAVSVVAEAVLRSRAGLASPDRPIGS-------FLFLGPTGVGKTELARAL 589
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +++ +D+S Q + + + + G+ + + R PYS
Sbjct: 590 AEALFGSEERMVRLDMSEYQERHTVSRLVGAPP-GYVGHEEAGQ-----LTEVVRRHPYS 643
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++ L++++K A P V + L + + G+ TDS GR V + + V TS +
Sbjct: 644 LLLLDEVEK-AHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNL 691
>gi|227552834|ref|ZP_03982883.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecium TX1330]
gi|257888815|ref|ZP_05668468.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,141,733]
gi|257897252|ref|ZP_05676905.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium Com12]
gi|293379009|ref|ZP_06625164.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium PC4.1]
gi|424763472|ref|ZP_18190947.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX1337RF]
gi|431041344|ref|ZP_19492838.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1590]
gi|431753215|ref|ZP_19541891.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2620]
gi|431758549|ref|ZP_19547175.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3083]
gi|431763306|ref|ZP_19551858.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3548]
gi|227178077|gb|EEI59049.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecium TX1330]
gi|257824869|gb|EEV51801.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium 1,141,733]
gi|257833817|gb|EEV60238.1| UvrB/UvrC protein/AAA ATPase [Enterococcus faecium Com12]
gi|292642550|gb|EFF60705.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium PC4.1]
gi|402422851|gb|EJV55077.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecium TX1337RF]
gi|430561650|gb|ELB00909.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1590]
gi|430612400|gb|ELB49441.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2620]
gi|430617109|gb|ELB53991.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3083]
gi|430622400|gb|ELB59128.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E3548]
Length = 828
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 19/167 (11%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL+E+
Sbjct: 521 RVVGQDEAVKAVSRAIRRARSGLKDPDRPIGS-------FMFLGPTGVGKTELAKALSEV 573
Query: 750 VFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI VD+S ++ S I D G L + I R KPYSV+
Sbjct: 574 MFGSEDALIRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RQKPYSVI 626
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G TDS GR V I + TS I
Sbjct: 627 LLDEVEK-AHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 672
>gi|403385695|ref|ZP_10927752.1| negative regulator of genetic competence clpC/mecB [Kurthia sp.
JC30]
Length = 820
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q EA+ IS+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 509 LHKRVVGQGEAVEAISRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 561
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE++FG++ +I +D+ SE S + G+ + ++ R KPYS
Sbjct: 562 AEVMFGDEDSMIRIDM-SEYMEKHSTSRLVGSPPGYVGYDEGGQ-----LTEKVRRKPYS 615
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 616 VVLLDEIEK-AHPDVFNILLQVLDDGRLTDSKGRVVDFRNTVVIMTSNI 663
>gi|347547703|ref|YP_004854031.1| putative endopeptidase Clp ATP-binding chain C [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346980774|emb|CBW84681.1| Putative endopeptidase Clp ATP-binding chain C [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 820
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD A+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 505 LHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 557
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +FG++ +I +D+S F +L G V Y + ++
Sbjct: 558 AESMFGDEDSMIRIDMSEYME-------------KFSTARLVGAPPGYVGYEEGGQLTEK 604
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 605 VRQKPYSVVLLDEIEK-AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659
>gi|339446255|ref|YP_004712259.1| hypothetical protein EGYY_28870 [Eggerthella sp. YY7918]
gi|338906007|dbj|BAK45858.1| hypothetical protein EGYY_28870 [Eggerthella sp. YY7918]
Length = 907
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ ++ A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 576 LHERVVGQDEAVSAVAGAIRRNRAGLSDPDRPIGS-------FLFLGPTGVGKTELAKAL 628
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +F ++ ++ +D +S+ F Q + G + + R KPYS
Sbjct: 629 AEYLFDSEKSMVRID------MSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRKPYS 682
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
V+ L++++K A P V + L + + G+ TD GR VS I + TS + G S+
Sbjct: 683 VILLDEIEK-AHPDVFNILLQVLDDGRLTDGQGRVVSFKNAIIIMTSNV--GSQSIR--- 736
Query: 867 TPVKFSEEIILGAKRWQMQTAISHGFADAAR 897
+FS + G+ M+ +S A A+
Sbjct: 737 ---EFSNQGGSGSMGQMMEDMMSGDIASTAK 764
>gi|304439880|ref|ZP_07399774.1| ABC superfamily ATP binding cassette transporter ABC protein
[Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371619|gb|EFM25231.1| ABC superfamily ATP binding cassette transporter ABC protein
[Peptoniphilus duerdenii ATCC BAA-1640]
Length = 819
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 90/187 (48%), Gaps = 35/187 (18%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L V QDEAI ++S+A+ R R+G R +GS F+GP VGK ++ L
Sbjct: 504 LRRSVKGQDEAIISLSKAIKRARVGLKDKNRPIGS-------FIFVGPTGVGKTYLSKKL 556
Query: 747 AEIVFGNKGKLIHVDVSS-------EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQE 799
AE VFGN+ +I +D+S + V P + G L + +
Sbjct: 557 AEEVFGNESNMIRIDMSEYMEKHSVSRLVGSPPGYVGHEE---------GGQLTEIV--- 604
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS----TI 855
RS PYSV+ ++++K A P V + L + + G TDS GR VS I + TS T+
Sbjct: 605 -RSNPYSVILFDEIEK-AHPDVFNILLQILDDGILTDSQGRTVSFKDTIIIMTSNAGATL 662
Query: 856 LKGKHSV 862
LK K S+
Sbjct: 663 LKNKSSL 669
>gi|427397794|ref|ZP_18890276.1| hypothetical protein HMPREF9307_02452 [Enterococcus durans
FB129-CNAB-4]
gi|430861155|ref|ZP_19478745.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1573]
gi|430965333|ref|ZP_19487735.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1576]
gi|431012569|ref|ZP_19490224.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1578]
gi|431266418|ref|ZP_19506176.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1623]
gi|425722105|gb|EKU85005.1| hypothetical protein HMPREF9307_02452 [Enterococcus durans
FB129-CNAB-4]
gi|430550523|gb|ELA90317.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1573]
gi|430555179|gb|ELA94731.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1576]
gi|430559666|gb|ELA99006.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1578]
gi|430576158|gb|ELB14836.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1623]
Length = 830
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 19/167 (11%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL+E+
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKDPDRPIGS-------FMFLGPTGVGKTELAKALSEV 575
Query: 750 VFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI VD+S ++ S I D G L + I R KPYSV+
Sbjct: 576 MFGSEDALIRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RQKPYSVI 628
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G TDS GR V I + TS I
Sbjct: 629 LLDEVEK-AHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|408528206|emb|CCK26380.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptomyces
davawensis JCM 4913]
Length = 851
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +S+AV R R G R +GS FLGP VGK ++A AL
Sbjct: 539 LHERVIGQDEAVQVVSEAVLRSRAGLASPDRPIGS-------FLFLGPTGVGKTELARAL 591
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +++ +D+S Q + + + + G+ + + R PYS
Sbjct: 592 AEALFGSEERMVRLDMSEYQERHTVSRLVGAPP-GYVGHEEAGQ-----LTEVVRRHPYS 645
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++ L++++K A P V + L + + G+ TD+ GR V + + V TS +
Sbjct: 646 LLLLDEVEK-AHPDVFNILLQVLDDGRLTDAQGRTVDFTNTVIVMTSNL 693
>gi|348172557|ref|ZP_08879451.1| Clp protease ATP binding subunit [Saccharopolyspora spinosa NRRL
18395]
Length = 829
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QD+A+ +++AV R R G G R VGS FLGP VGK ++A AL
Sbjct: 524 LHQRVVGQDDAVRALARAVRRSRSGLGDPDRPVGS-------FLFLGPTGVGKTELAKAL 576
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +++ +D+S Q + + + G+ + + R PYS
Sbjct: 577 AEALFGDEQRMVRLDMSEFQERHTASRLVGAPP-GYVGHGEPGE-----LTEAVRRHPYS 630
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V ++L + + G+ TD GR V + + + TS +
Sbjct: 631 VILLDEVEK-AHPDVFNTLLQVLDDGRLTDGQGRTVDFTNTVLIMTSNL 678
>gi|293553560|ref|ZP_06674185.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1039]
gi|291602282|gb|EFF32509.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1039]
Length = 830
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 19/167 (11%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL+E+
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKDPDRPIGS-------FMFLGPTGVGKTELAKALSEV 575
Query: 750 VFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI VD+S ++ S I D G L + I R KPYSV+
Sbjct: 576 MFGSEDALIRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RQKPYSVI 628
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G TDS GR V I + TS I
Sbjct: 629 LLDEVEK-AHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|329940378|ref|ZP_08289659.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Streptomyces
griseoaurantiacus M045]
gi|329300439|gb|EGG44336.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Streptomyces
griseoaurantiacus M045]
Length = 843
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +S+AV R R G R +GS FLGP VGK ++A AL
Sbjct: 541 LHERVVGQDEAVRAVSEAVLRSRAGLASPDRPIGS-------FLFLGPTGVGKTELARAL 593
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +++ +D+S Q + + + + G+ + + R PYS
Sbjct: 594 AEALFGSEERMVRLDMSEYQERHTVSRLVGAPP-GYVGHEEAGQ-----LTEVVRRHPYS 647
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++ L++++K A P V + L + + G+ TDS GR V + + V TS +
Sbjct: 648 LLLLDEVEK-AHPDVFNILLQVLDDGRLTDSQGRTVDFTHTVIVMTSNL 695
>gi|261209122|ref|ZP_05923525.1| uvrB/uvrC protein/AAA ATPase [Enterococcus faecium TC 6]
gi|289567358|ref|ZP_06447730.1| chaperone protein clpB [Enterococcus faecium D344SRF]
gi|294616220|ref|ZP_06696015.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1636]
gi|294619581|ref|ZP_06699011.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1679]
gi|430821377|ref|ZP_19439987.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0045]
gi|430827056|ref|ZP_19445223.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0164]
gi|430829873|ref|ZP_19447944.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0269]
gi|430851185|ref|ZP_19468937.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1185]
gi|430904851|ref|ZP_19484892.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1575]
gi|431214027|ref|ZP_19501084.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1620]
gi|431666134|ref|ZP_19523987.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1904]
gi|431747317|ref|ZP_19536114.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2134]
gi|431766209|ref|ZP_19554705.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E4215]
gi|260076949|gb|EEW64673.1| uvrB/uvrC protein/AAA ATPase [Enterococcus faecium TC 6]
gi|289160849|gb|EFD08777.1| chaperone protein clpB [Enterococcus faecium D344SRF]
gi|291590918|gb|EFF22632.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1636]
gi|291594179|gb|EFF25623.1| negative regulator of genetic competence ClpC/mecB [Enterococcus
faecium E1679]
gi|430438524|gb|ELA48947.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0045]
gi|430444409|gb|ELA54256.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0164]
gi|430479362|gb|ELA56611.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E0269]
gi|430534401|gb|ELA74855.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1185]
gi|430554630|gb|ELA94222.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1575]
gi|430570345|gb|ELB09310.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1620]
gi|430600061|gb|ELB37730.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E1904]
gi|430606585|gb|ELB43934.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E2134]
gi|430627279|gb|ELB63796.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecium E4215]
Length = 830
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 19/167 (11%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL+E+
Sbjct: 523 RVVGQDEAVKAVSRAIRRARSGLKDPDRPIGS-------FMFLGPTGVGKTELAKALSEV 575
Query: 750 VFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ LI VD+S ++ S I D G L + I R KPYSV+
Sbjct: 576 MFGSEDALIRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RQKPYSVI 628
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G TDS GR V I + TS I
Sbjct: 629 LLDEVEK-AHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNI 674
>gi|357012846|ref|ZP_09077845.1| ClpC [Paenibacillus elgii B69]
Length = 814
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHDRVIGQDEAVKAVSRAIRRARAGLKDPKRPMGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AESLFGDENAVIRIDM-SEYMEKHSTSRLVGAPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNV 660
>gi|357039780|ref|ZP_09101572.1| ATPase AAA-2 domain protein [Desulfotomaculum gibsoniae DSM 7213]
gi|355357586|gb|EHG05359.1| ATPase AAA-2 domain protein [Desulfotomaculum gibsoniae DSM 7213]
Length = 815
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 27/174 (15%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L ++V QDEA+ +S+A+ R R G + KR I FLGP VGK ++A ALAE
Sbjct: 513 LHQRVVGQDEAVAAVSRAIRRARAGL-----KDPKRPIGSFIFLGPTGVGKTELARALAE 567
Query: 749 IVFGNKGKLIHVDVSS-------EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFR 801
+FG++ ++ +D+S + V P G L D + R
Sbjct: 568 AMFGDEDAMVRIDMSEYMEKFAVSRLVGAPPGYVGYDE---------GGQLTDAV----R 614
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYSVV L++++K A P V + L + + G+ TD+ GR V + + TS +
Sbjct: 615 RKPYSVVLLDEIEK-AHPDVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSNV 667
>gi|379724697|ref|YP_005316828.1| protein ClpC [Paenibacillus mucilaginosus 3016]
gi|386727451|ref|YP_006193777.1| protein ClpC [Paenibacillus mucilaginosus K02]
gi|378573369|gb|AFC33679.1| ClpC [Paenibacillus mucilaginosus 3016]
gi|384094576|gb|AFH66012.1| protein ClpC [Paenibacillus mucilaginosus K02]
Length = 814
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHDRVIGQDEAVKAVSRAIRRARAGLKDPKRPMGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AESLFGDENSVIRIDM-SEYMEKHSTSRLVGAPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNV 660
>gi|337751755|ref|YP_004645917.1| protein ClpC [Paenibacillus mucilaginosus KNP414]
gi|336302944|gb|AEI46047.1| ClpC [Paenibacillus mucilaginosus KNP414]
Length = 814
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHDRVIGQDEAVKAVSRAIRRARAGLKDPKRPMGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AESLFGDENSVIRIDM-SEYMEKHSTSRLVGAPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNV 660
>gi|325002495|ref|ZP_08123607.1| ATP-dependent chaperone ClpB [Pseudonocardia sp. P1]
Length = 873
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 19/223 (8%)
Query: 667 SSCSAPHTGEPFDPRDYKTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSK 724
SS + G + K LR+ L +V Q EA+ +S AV R R G + N
Sbjct: 544 SSWTGVPAGRMLEGETAKLLRMEDELGRRVIGQAEAVRVVSDAVRRARAGIADE---NRP 600
Query: 725 RGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNI--DF 782
G +L FLGP VGK ++A ALAE +F ++ ++ VD+S S+ +S+ +
Sbjct: 601 TGSFL-FLGPTGVGKTELAKALAEFLFDDERAMVRVDMSE---YSEKHSVARLVGAPPGY 656
Query: 783 CDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDV 842
G+ + + R +PY+VV L++++K A P V +L + + G+ TD GR V
Sbjct: 657 VGYDQGGQ-----LTEAVRRRPYTVVLLDEVEK-AHPDVFDTLLQVLDDGRLTDGQGRTV 710
Query: 843 SISGMIFVATSTILKGKHSVHPQTTPVKFSEEIILGAKRWQMQ 885
I V TS + G ++ Q K E+ ++ R +
Sbjct: 711 DFRNTILVLTSNL--GSQAIADQALDEKAREDAVMAVVRTHFK 751
>gi|315222402|ref|ZP_07864307.1| ATPase family protein [Streptococcus anginosus F0211]
gi|315188563|gb|EFU22273.1| ATPase family protein [Streptococcus anginosus F0211]
Length = 809
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q+EAI IS+A+ R + G + R +GS FLGP
Sbjct: 498 DAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R++PYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 598 GYEEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|258510801|ref|YP_003184235.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257477527|gb|ACV57846.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 676
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 17/173 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA V QDEA+ +++A+ R R+G R +GS F+GP VGK
Sbjct: 372 KNLEADLAAVVIGQDEAVRQVARAIRRSRVGLRRGDRPIGS-------FLFVGPTGVGKT 424
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++A LAEI+FG+K +I +D+S + + + + G+ + ++
Sbjct: 425 EMARRLAEILFGSKDAMIRLDMSEYMEKHSVSKLIGAPP-GYVGYEQAGQ-----LTEQV 478
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
R PYS++ +++++K A P VQ + + G+ TDS GR VS + + TS
Sbjct: 479 RRHPYSLILVDEIEK-AHPDVQHIFLQIMEDGRLTDSQGRTVSFKDTLIIMTS 530
>gi|456013239|gb|EMF46898.1| DNA repair protein RadA [Planococcus halocryophilus Or1]
Length = 828
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +IS+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 36 LHNRVIGQNEAVTSISKAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 88
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 89 AESMFGDEEAMIRIDM-SEYMERHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 142
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 143 VVLLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRRVDFRNTVIIMTSNV 190
>gi|169830395|ref|YP_001716377.1| ATPase [Candidatus Desulforudis audaxviator MP104C]
gi|169637239|gb|ACA58745.1| ATPase AAA-2 domain protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 812
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 25/180 (13%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVG 738
K LR+ L E+V QDEA+ +S+A+ R R G R +GS FLGP VG
Sbjct: 502 KLLRMEDLLHERVVGQDEAVRAVSRAIRRARAGLKDPRRPIGS-------FIFLGPTGVG 554
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---Y 795
K ++A AL E +FG++ L+ +D+S Q + + G V D
Sbjct: 555 KTELARALGEALFGDEDALVRIDMSEYQERHTVSRLVGAPP---------GYVGYDEGGQ 605
Query: 796 IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ + R +PY+VV L++++K A P V + L + + G+ TD+ GR V + + TS +
Sbjct: 606 LTEAVRRRPYTVVLLDEIEK-AHPEVFNILLQVLEDGRLTDARGRTVDFRNTVIILTSNV 664
>gi|266621305|ref|ZP_06114240.1| negative regulator of genetic competence ClpC/MecB [Clostridium
hathewayi DSM 13479]
gi|288867045|gb|EFC99343.1| negative regulator of genetic competence ClpC/MecB [Clostridium
hathewayi DSM 13479]
Length = 816
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 655 VSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG 714
V EG +VV S + E + + K L L E+V Q+EA+ +++A+ R R+G
Sbjct: 474 VDEGEIADVVSSWTKIPVRKLEEGESQRLKNLESILHERVIGQEEAVTAVAKAIRRGRVG 533
Query: 715 ---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQP 771
R +GS FLGP VGK +++ ALAE +FG + LI VD+S
Sbjct: 534 LKDPKRPIGS-------FLFLGPTGVGKTELSKALAEAMFGTENALIRVDMS-------- 578
Query: 772 NSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKA 828
+ ++ G V D + ++ R PYSV+ ++++K A P V + L +
Sbjct: 579 -EYMEKHSVSKMIGSPPGYVGYDEGGQLSEKVRRNPYSVILFDEIEK-AHPDVFNILLQV 636
Query: 829 ISTGKFTDSYGRDVSISGMIFVATS 853
+ G TD+ GR + + + TS
Sbjct: 637 LDDGHITDAQGRKIDFKNTVIIMTS 661
>gi|417089640|ref|ZP_11955603.1| stress response-related Clp ATPase [Streptococcus suis R61]
gi|353533972|gb|EHC03610.1| stress response-related Clp ATPase [Streptococcus suis R61]
Length = 816
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q+EAI +S+A+ R + G R +GS FLGP
Sbjct: 504 DTKKYLNLEAELHKRVIGQEEAISAVSRAIRRNQSGIRTGRRPIGS-------FMFLGPT 556
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 557 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 603
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 604 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 662
Query: 849 FVATSTI 855
+ TS +
Sbjct: 663 IIMTSNL 669
>gi|197303865|ref|ZP_03168900.1| hypothetical protein RUMLAC_02603 [Ruminococcus lactaris ATCC
29176]
gi|197297048|gb|EDY31613.1| ATPase family associated with various cellular activities (AAA)
[Ruminococcus lactaris ATCC 29176]
Length = 812
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 88/186 (47%), Gaps = 33/186 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D K L L ++V QDEA+ +++AV R R+G R +GS FLGP
Sbjct: 497 DTERLKNLEKILQKRVIGQDEAVSAVARAVKRGRVGLKDPKRPIGS-------FLFLGPT 549
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVS--------SEQRVSQPNSIFDCQNIDFCDCKL 787
VGK +++ ALAE +FG + +I VD+S S+ S P + + D
Sbjct: 550 GVGKTELSKALAEALFGKEEAMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQLSD--- 606
Query: 788 RGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
+ R+ PYSV+ ++++K A P V + L + + G TDS GR V S
Sbjct: 607 -----------QVRTHPYSVLLFDEIEK-AHPDVFNVLLQVLDDGHITDSQGRKVDFSNT 654
Query: 848 IFVATS 853
+ + TS
Sbjct: 655 VIIMTS 660
>gi|296125907|ref|YP_003633159.1| ATPase AAA [Brachyspira murdochii DSM 12563]
gi|296017723|gb|ADG70960.1| ATPase AAA-2 domain protein [Brachyspira murdochii DSM 12563]
Length = 828
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +KV Q EAI +IS+A+ R R G + R +GS FLGP VGK +A L
Sbjct: 515 LHQKVVGQKEAIASISRAIRRSRAGLKTSKRPLGS-------FIFLGPTGVGKTALAKVL 567
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRG-------KVLVDYIYQE 799
+E +FG+ LI +D+S F +L G + ++
Sbjct: 568 SEFMFGDSDALIRIDMSEFME-------------KFAVSRLIGAPPGYVGYEEGGGLTEK 614
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYS++ ++++KA P V + L + + G+ TD++GR V S I + TS +
Sbjct: 615 VRRKPYSLILFDEIEKA-HPDVTNILLQVLEEGQLTDNFGRKVDFSNTIIIITSNL 669
>gi|146297365|ref|YP_001181136.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410941|gb|ABP67945.1| ATPase AAA-2 domain protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 830
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +++A+ R R+G R +GS FLGP VGK ++ AL
Sbjct: 513 LHKRVVGQDEAVRAVARAIRRGRVGLKDPKRPIGS-------FIFLGPTGVGKTELCRAL 565
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG + LI +D +S+ F+ + G + ++ R +PYS
Sbjct: 566 AEALFGTEDALIRID------MSEYMEKFNVSKLIGSPPGYVGYEEGGQLTEKVRRRPYS 619
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P V + L + + G+ TDS GR VS + + TS I
Sbjct: 620 VVLFDEIEK-AHPDVFNLLLQILDDGRLTDSQGRTVSFRNTVIIMTSNI 667
>gi|403511395|ref|YP_006643033.1| sigma-54 interaction domain protein [Nocardiopsis alba ATCC
BAA-2165]
gi|402800569|gb|AFR07979.1| sigma-54 interaction domain protein [Nocardiopsis alba ATCC
BAA-2165]
Length = 827
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +S+A+ R R G G R VGS FLGP VGK ++A AL
Sbjct: 528 LHDRVIGQDEAVTAVSEAIRRNRAGLGDPDRPVGS-------FLFLGPTGVGKTELARAL 580
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ ++ +D+S Q S F + G+ + + R PYS
Sbjct: 581 AEALFGSEDSMVRLDMSEFQE-RHTASRLTGAPPGFVGYEEAGQ-----LTEAVRRHPYS 634
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TD GR V + + TS +
Sbjct: 635 VLLLDEIEK-AHPDVFNLLLQLLDDGRLTDGQGRTVDFRNTVVIMTSNL 682
>gi|269792687|ref|YP_003317591.1| ATP-dependent chaperone ClpB [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100322|gb|ACZ19309.1| ATP-dependent chaperone ClpB [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 871
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 27/198 (13%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVG 738
K LR+ L ++V QDEA+ +S+AV R R G R +GS FLGP VG
Sbjct: 566 KLLRLEEILHKRVVGQDEAVRLVSEAVLRARAGIKDPRRPIGS-------FLFLGPTGVG 618
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---Y 795
K ++A ALAE +F ++ +I +D+S + ++ G V D
Sbjct: 619 KTELAKALAEALFDSEDNMIRIDMS---------EYMEKHSVSRLIGAPPGYVGYDEGGQ 669
Query: 796 IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ ++ R KPYSV+ ++++K A P V ++L + + G+ TDS+G+ V + + TS +
Sbjct: 670 LTEQVRRKPYSVILFDEVEK-AHPDVFNTLLQILDDGRVTDSHGKTVDFKNCVIILTSNV 728
Query: 856 LKGKHSVHPQTTPVKFSE 873
G + T P+ F E
Sbjct: 729 --GSQHLSRCTDPMAFEE 744
>gi|405979476|ref|ZP_11037819.1| hypothetical protein HMPREF9241_00542 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404391892|gb|EJZ86953.1| hypothetical protein HMPREF9241_00542 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 822
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 115/236 (48%), Gaps = 29/236 (12%)
Query: 629 QEANTPKLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEP-FDPRDYKTLR 687
+E+N + KE + G E D+++E T + + + S TG P F +T +
Sbjct: 456 EESNLVAQREEKETSWKG---GESDSIAEVTEEEIAEVLAMS---TGIPVFKLTQTETTK 509
Query: 688 I-----ALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
+ L ++V Q+EA+ +SQ++ R R G + ++ G F GP VGK ++
Sbjct: 510 LLKMEDELHKRVIGQEEAVRALSQSIRRTRSG----LKDPNRPGGSFIFAGPTGVGKTEL 565
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQE 799
A ALAE +FG++ LI +D+S + +F G V D + ++
Sbjct: 566 AKALAEFLFGDEDALIQLDMSEFSEKHTASRLFGAPP---------GYVGYDEGGQLTEK 616
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KP+SVV ++++K A P + +SL + + G+ TDS GR V + + T+ +
Sbjct: 617 VRRKPFSVVLFDEVEK-AHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNL 671
>gi|384208114|ref|YP_005593834.1| hemolysin B ATP-binding subunit [Brachyspira intermedia PWS/A]
gi|343385764|gb|AEM21254.1| hemolysin B ATP-binding subunit [Brachyspira intermedia PWS/A]
Length = 828
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +KV Q EAI +IS+A+ R R G + R +GS FLGP VGK +A L
Sbjct: 515 LHQKVVGQKEAISSISKAIRRSRAGLKTSKRPLGS-------FIFLGPTGVGKTALAKVL 567
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRG-------KVLVDYIYQE 799
+E +FG+ LI +D+S F +L G + ++
Sbjct: 568 SEFMFGDSDALIRIDMSEFME-------------KFAVSRLIGAPPGYVGYEEGGGLTEK 614
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYS++ ++++KA P V + L + + G+ TD++GR V S I + TS +
Sbjct: 615 VRRKPYSLILFDEIEKA-HPDVTNILLQVLEEGQLTDNFGRKVDFSNTIIIITSNL 669
>gi|225620154|ref|YP_002721411.1| hemolysin B [Brachyspira hyodysenteriae WA1]
gi|225214973|gb|ACN83707.1| hemolysin B; ClpA, ATPases with chaperone activity, ATP-binding
subunit [Brachyspira hyodysenteriae WA1]
Length = 828
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +KV Q EAI +IS+A+ R R G + R +GS FLGP VGK +A L
Sbjct: 515 LHQKVVGQKEAISSISKAIRRSRAGLKTSKRPLGS-------FIFLGPTGVGKTALAKVL 567
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRG-------KVLVDYIYQE 799
+E +FG+ LI +D+S F +L G + ++
Sbjct: 568 SEFMFGDSDALIRIDMSEFME-------------KFAVSRLIGAPPGYVGYEEGGGLTEK 614
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYS++ ++++KA P V + L + + G+ TD++GR V S I + TS +
Sbjct: 615 VRRKPYSLILFDEIEKA-HPDVTNILLQVLEEGQLTDNFGRKVDFSNTIIIITSNL 669
>gi|288920262|ref|ZP_06414576.1| ATP-dependent chaperone ClpB [Frankia sp. EUN1f]
gi|288348366|gb|EFC82629.1| ATP-dependent chaperone ClpB [Frankia sp. EUN1f]
Length = 881
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 19/177 (10%)
Query: 684 KTLRI--ALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVG 738
K LR+ L E+V QDEA+ ++ AV R R G R VGS FLGP VG
Sbjct: 566 KLLRLDDILHERVVGQDEAVGLVADAVIRARAGIRDQRRPVGS-------FLFLGPTGVG 618
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K ++A AL E +F ++ +I +D+S Q + + + + G+ + +
Sbjct: 619 KTELARALCEALFDSEDAMIRIDMSEYQERHTVSRLIGSPP-GYVGHEEGGQ-----LTE 672
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++KA + ++L + + G+ TD GR VS S + + TS I
Sbjct: 673 AVRRKPYSVVLLDEIEKAHTDVF-NTLLQVLDDGRLTDGRGRTVSFSDTVIIMTSNI 728
>gi|223933536|ref|ZP_03625518.1| ATPase AAA-2 domain protein [Streptococcus suis 89/1591]
gi|386585000|ref|YP_006081403.1| stress response-related Clp ATPase [Streptococcus suis D9]
gi|223897796|gb|EEF64175.1| ATPase AAA-2 domain protein [Streptococcus suis 89/1591]
gi|353737146|gb|AER18155.1| stress response-related Clp ATPase [Streptococcus suis D9]
Length = 817
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q+EAI +S+A+ R + G R +GS FLGP
Sbjct: 504 DTKKYLNLEAELHKRVIGQEEAISAVSRAIRRNQSGIRTGRRPIGS-------FMFLGPT 556
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 557 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 603
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 604 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 662
Query: 849 FVATSTI 855
+ TS +
Sbjct: 663 IIMTSNL 669
>gi|386587053|ref|YP_006083455.1| stress response-related Clp ATPase [Streptococcus suis D12]
gi|353739199|gb|AER20207.1| stress response-related Clp ATPase [Streptococcus suis D12]
Length = 817
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q+EAI +S+A+ R + G R +GS FLGP
Sbjct: 504 DTKKYLNLEAELHKRVIGQEEAISAVSRAIRRNQSGIRTGRRPIGS-------FMFLGPT 556
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 557 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 603
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 604 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 662
Query: 849 FVATSTI 855
+ TS +
Sbjct: 663 IIMTSNL 669
>gi|422420829|ref|ZP_16497782.1| negative regulator of genetic competence ClpC/MecB, partial
[Listeria seeligeri FSL S4-171]
gi|313639760|gb|EFS04509.1| negative regulator of genetic competence ClpC/MecB [Listeria
seeligeri FSL S4-171]
Length = 783
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD A+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 468 LHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 520
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +FG++ +I +D+S F +L G V Y + ++
Sbjct: 521 AESMFGDEDSMIRIDMSEYME-------------KFSTARLVGAPPGYVGYEEGGQLTEK 567
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 568 VRQKPYSVVLLDEIEK-AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 622
>gi|310644235|ref|YP_003948994.1| ATPase AAA [Paenibacillus polymyxa SC2]
gi|309249186|gb|ADO58753.1| ATPase AAA-2 domain-containing protein [Paenibacillus polymyxa SC2]
gi|392304928|emb|CCI71291.1| ATP-dependent Clp protease ATP-binding subunit clpC [Paenibacillus
polymyxa M1]
Length = 814
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 19/181 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHERVIGQEEAVKAVSRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AESMFGDENAVIRIDM-SEYMEKHSTSRLVGAPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
VV L++++K A P V + L + + G+ TDS GR V + + TS + G ++ +
Sbjct: 613 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNV--GAQAIKRNS 669
Query: 867 T 867
T
Sbjct: 670 T 670
>gi|270290578|ref|ZP_06196802.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Pediococcus
acidilactici 7_4]
gi|270280638|gb|EFA26472.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Pediococcus
acidilactici 7_4]
Length = 735
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 88/179 (49%), Gaps = 31/179 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L V QDEA+ IS+A+ R RIG GR +GS F+GP VGK ++A L
Sbjct: 441 LKAHVIGQDEAVDKISRAIRRNRIGLNGTGRPIGS-------FLFVGPTGVGKTELAKQL 493
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQE 799
A+ +FG+K +I D+S +P+SI KL G V Y + ++
Sbjct: 494 ADQLFGSKDAMIRFDMSE---YMEPHSI----------SKLIGSPPGYVGYEEAGQLTEQ 540
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R PYS++ L++++KA P V + + G+ TDS GR VS I + TS G
Sbjct: 541 VRRHPYSLILLDEVEKAH-PDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGSG 598
>gi|225377785|ref|ZP_03755006.1| hypothetical protein ROSEINA2194_03436 [Roseburia inulinivorans DSM
16841]
gi|225210369|gb|EEG92723.1| hypothetical protein ROSEINA2194_03436 [Roseburia inulinivorans DSM
16841]
Length = 818
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 17/173 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKK 740
K L L ++V Q+EA+ +++AV R R+G R +GS FLGP VGK
Sbjct: 508 KKLEATLHKRVVGQEEAVTAVAKAVRRGRVGLKDPRRPIGS-------FLFLGPTGVGKT 560
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
+I+ ALAE VFGN+ +I VD+S + + + + G+ + ++
Sbjct: 561 EISKALAEAVFGNEQAMIRVDMSEYMEKHSVSKMIGSPP-GYVGHEDGGQ-----LSEKV 614
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
R PYSV+ ++++K A P V + L + + G TDS GR V I + TS
Sbjct: 615 RRNPYSVILFDEIEK-AHPDVFNILLQVLDDGHITDSQGRRVDFKNTIIIMTS 666
>gi|319940027|ref|ZP_08014381.1| ATP-dependent Clp proteinase [Streptococcus anginosus 1_2_62CV]
gi|319810741|gb|EFW07068.1| ATP-dependent Clp proteinase [Streptococcus anginosus 1_2_62CV]
Length = 809
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q+EAI IS+A+ R + G + R +GS FLGP
Sbjct: 498 DAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDETALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R++PYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 598 GYEEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|125974293|ref|YP_001038203.1| ATPase AAA-2 [Clostridium thermocellum ATCC 27405]
gi|256003489|ref|ZP_05428479.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 2360]
gi|281418347|ref|ZP_06249367.1| ATPase AAA-2 domain protein [Clostridium thermocellum JW20]
gi|385779762|ref|YP_005688927.1| ATPase [Clostridium thermocellum DSM 1313]
gi|419722358|ref|ZP_14249502.1| ATPase AAA-2 domain protein [Clostridium thermocellum AD2]
gi|419725938|ref|ZP_14252972.1| ATPase AAA-2 domain protein [Clostridium thermocellum YS]
gi|125714518|gb|ABN53010.1| ATPase AAA-2 domain protein [Clostridium thermocellum ATCC 27405]
gi|255992513|gb|EEU02605.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 2360]
gi|281409749|gb|EFB40007.1| ATPase AAA-2 domain protein [Clostridium thermocellum JW20]
gi|316941442|gb|ADU75476.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 1313]
gi|380770714|gb|EIC04600.1| ATPase AAA-2 domain protein [Clostridium thermocellum YS]
gi|380781543|gb|EIC11197.1| ATPase AAA-2 domain protein [Clostridium thermocellum AD2]
Length = 818
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ IS+A+ R R+G R VGS FLGP VGK +++ AL
Sbjct: 507 LHKRVIGQDEAVKAISKAIRRGRVGLKDPKRPVGS-------FIFLGPTGVGKTELSKAL 559
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG + +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 560 AEALFGEENAMIRIDM-SEYMEKHSVSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 613
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P + + L + + G+ TDS GR V + + TS I
Sbjct: 614 VVLFDEIEK-AHPDIFNILLQILEDGRLTDSQGRVVDFRNTVIIMTSNI 661
>gi|403238378|ref|ZP_10916964.1| Class III stress response-related ATPase, ClpC [Bacillus sp.
10403023]
Length = 814
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +S+AV R R G R GS FLGP VGK ++A AL
Sbjct: 507 LHSRVIGQEEAVKAVSKAVRRSRAGLKDPKRPTGS-------FIFLGPTGVGKTELARAL 559
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I VD+ SE S + + G+ + ++ R KPYS
Sbjct: 560 AESIFGDEDAMIRVDM-SEYMEKHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 613
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TDS GR V I + TS +
Sbjct: 614 VILLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNV 661
>gi|418963557|ref|ZP_13515394.1| Clp amino terminal domain protein [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383343153|gb|EID21348.1| Clp amino terminal domain protein [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 809
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 35/210 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q+EAI IS+A+ R + G + R +GS FLGP
Sbjct: 498 DAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDETALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R++PYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 598 GYEEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 656
Query: 849 FVATS----TILKGKHSVHPQTTPVKFSEE 874
+ TS T L+ +V V+F E
Sbjct: 657 IIMTSNLGATSLRDDKTVGFGARDVRFDHE 686
>gi|3913865|sp|Q54316.1|HLYB_TREHY RecName: Full=Hemolysin B
gi|511145|emb|CAA51655.1| hemolysin [Brachyspira hyodysenteriae]
Length = 828
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +KV Q EAI +IS+A+ R R G + R +GS FLGP VGK +A L
Sbjct: 515 LHQKVVGQKEAISSISKAIRRSRAGLKTSKRPLGS-------FIFLGPTGVGKTALAKVL 567
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRG-------KVLVDYIYQE 799
+E +FG+ LI +D+S F +L G + ++
Sbjct: 568 SEFMFGDSDALIRIDMSEFME-------------KFAVSRLIGAPPGYVGYEEGGGLTEK 614
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYS++ ++++KA P V + L + + G+ TD++GR V S I + TS +
Sbjct: 615 VRRKPYSLILFDEIEKA-HPDVTNILLQVLEEGQLTDNFGRKVDFSNTIIIITSNL 669
>gi|304386068|ref|ZP_07368408.1| ATP-dependent Clp protease [Pediococcus acidilactici DSM 20284]
gi|304327795|gb|EFL95021.1| ATP-dependent Clp protease [Pediococcus acidilactici DSM 20284]
Length = 735
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 88/179 (49%), Gaps = 31/179 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L V QDEA+ IS+A+ R RIG GR +GS F+GP VGK ++A L
Sbjct: 441 LKAHVIGQDEAVDKISRAIRRNRIGLNGTGRPIGS-------FLFVGPTGVGKTELAKQL 493
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQE 799
A+ +FG+K +I D+S +P+SI KL G V Y + ++
Sbjct: 494 ADQLFGSKDAMIRFDMSE---YMEPHSI----------SKLIGSPPGYVGYEEAGQLTEQ 540
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R PYS++ L++++KA P V + + G+ TDS GR VS I + TS G
Sbjct: 541 VRRHPYSLILLDEVEKAH-PDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGSG 598
>gi|374338928|ref|YP_005095647.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Streptococcus
macedonicus ACA-DC 198]
gi|372285047|emb|CCF03379.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Streptococcus
macedonicus ACA-DC 198]
Length = 813
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L ++V QD AI IS+A+ R + G R +GS FLGP
Sbjct: 502 DSKKYLNLEKEFHKRVIGQDSAISAISRAIRRNQAGIRTGKRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAELLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 602 GYEEGGELTEKVRNKPYSVLLFDEIEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|302024539|ref|ZP_07249750.1| stress response-related Clp ATPase [Streptococcus suis 05HAS68]
gi|330833586|ref|YP_004402411.1| stress response-related Clp ATPase [Streptococcus suis ST3]
gi|329307809|gb|AEB82225.1| stress response-related Clp ATPase [Streptococcus suis ST3]
Length = 817
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q+EAI +S+A+ R + G R +GS FLGP
Sbjct: 504 DTKKYLNLEAELHKRVIGQEEAISAVSRAIRRNQSGIRTGRRPIGS-------FMFLGPT 556
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 557 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 603
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 604 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 662
Query: 849 FVATSTI 855
+ TS +
Sbjct: 663 IIMTSNL 669
>gi|218288465|ref|ZP_03492755.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
gi|218241438|gb|EED08612.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
Length = 676
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 17/173 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA V QDEA+ +++A+ R R+G R +GS F+GP VGK
Sbjct: 372 KNLEADLAAVVIGQDEAVRQVARAIRRSRVGLRKGDRPIGS-------FLFVGPTGVGKT 424
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++A LAEI+FG+K +I +D+S + + + + G+ + ++
Sbjct: 425 EMARRLAEILFGSKDAMIRLDMSEYMEKHSVSKLIGAPP-GYVGYEQAGQ-----LTEQV 478
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
R PYS++ +++++K A P VQ + + G+ TDS GR VS + + TS
Sbjct: 479 RRHPYSLILVDEIEK-AHPDVQHIFLQIMEDGRLTDSQGRTVSFKDTLIIMTS 530
>gi|392958574|ref|ZP_10324083.1| Class III stress response-related ATPase, ClpC [Bacillus macauensis
ZFHKF-1]
gi|391875475|gb|EIT84086.1| Class III stress response-related ATPase, ClpC [Bacillus macauensis
ZFHKF-1]
Length = 810
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +IS+A+ R R G R +GS FLGP VGK ++A A+
Sbjct: 506 LHNRVIGQDEAVQSISKAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAV 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AESLFGDEDAIIRIDM-SEYMEKHTTSRLVGSPPGYVGHEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 VILLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRTVDFRNTVVIMTSNV 660
>gi|406658808|ref|ZP_11066948.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
iniae 9117]
gi|405579023|gb|EKB53137.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
iniae 9117]
Length = 815
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQEDAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGMLTDSRGRRVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|319646264|ref|ZP_08000494.1| ClpE protein [Bacillus sp. BT1B_CT2]
gi|317392014|gb|EFV72811.1| ClpE protein [Bacillus sp. BT1B_CT2]
Length = 698
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + K L L+ +V Q EA+ +++AV R R G R VGS F+GP
Sbjct: 394 DQKKMKELEAHLSSRVIGQKEAVKKVAKAVRRSRAGLKSKNRPVGS-------FLFVGPT 446
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDY 795
VGK +++ LAE +FG K +I +D+ SE S + + G+
Sbjct: 447 GVGKTELSKRLAEELFGTKDAIIRLDM-SEYMEKHAVSKLIGSPPGYVGHEEAGQ----- 500
Query: 796 IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ ++ R PYS+V L++++K A P VQ + + G+ TDS GR VS + + TS
Sbjct: 501 LTEKVRRNPYSIVLLDEIEK-AHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSNA 559
Query: 856 LKGKHSVHPQTTPVKFS-EEIILG 878
V + T V F+ EE ++G
Sbjct: 560 -----GVSEKRTTVGFNREEQVMG 578
>gi|357237563|ref|ZP_09124904.1| Clp amino terminal domain protein [Streptococcus ictaluri 707-05]
gi|356753753|gb|EHI70856.1| Clp amino terminal domain protein [Streptococcus ictaluri 707-05]
Length = 813
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ IS+A+ R + G R +GS FLGP
Sbjct: 502 DSKKYLNLEKELHKRVIGQEDAVSAISRAIRRNQSGIRTGRRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 602 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGMLTDSRGRKVDFSNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|94985317|ref|YP_604681.1| ATPase AAA [Deinococcus geothermalis DSM 11300]
gi|94555598|gb|ABF45512.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Deinococcus
geothermalis DSM 11300]
Length = 745
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 11/164 (6%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L E+V Q EAI +S A+ R R+G +G ++ F+GP VGK +A ALA+
Sbjct: 446 LQEQVYGQPEAIKALSSALRRARVG----LGGRTRVSASFLFVGPSGVGKTHLAKALAKT 501
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG++ LI VD+S Q + + + + G+ + + R +P+SV+
Sbjct: 502 LFGSERSLIRVDMSEFQEAHSISKLIGSPP-GYVGFEQGGR-----LTEAVRRQPFSVIL 555
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
L++++K A P V ++ + + G+ TD GR V I + TS
Sbjct: 556 LDEIEK-AHPDVYNTFLQVLDDGRLTDGLGRTVDFRRTIIIMTS 598
>gi|375310836|ref|ZP_09776101.1| ATPase aaa-2 domain-containing protein [Paenibacillus sp. Aloe-11]
gi|375077204|gb|EHS55447.1| ATPase aaa-2 domain-containing protein [Paenibacillus sp. Aloe-11]
Length = 814
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 20/202 (9%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHERVIGQEEAVKAVSRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AESMFGDENAVIRIDM-SEYMEKHSTSRLVGAPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
VV L++++K A P V + L + + G+ TDS GR V + + TS + G ++ +
Sbjct: 613 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNV--GAQAIKRNS 669
Query: 867 TPVKFSEEIILGAKRWQMQTAI 888
T + F+ + GA M+ +
Sbjct: 670 T-LGFTAVVDAGADYDNMKGKV 690
>gi|335032301|ref|ZP_08525701.1| chaperone protein ClpB [Streptococcus anginosus SK52 = DSM 20563]
gi|333767305|gb|EGL44555.1| chaperone protein ClpB [Streptococcus anginosus SK52 = DSM 20563]
Length = 809
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q+EAI IS+A+ R + G + R +GS FLGP
Sbjct: 498 DAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDETALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R++PYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 598 GYEEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|319946100|ref|ZP_08020348.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
australis ATCC 700641]
gi|417919257|ref|ZP_12562792.1| Clp amino terminal domain protein [Streptococcus australis ATCC
700641]
gi|319747746|gb|EFV99991.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
australis ATCC 700641]
gi|342833947|gb|EGU68226.1| Clp amino terminal domain protein [Streptococcus australis ATCC
700641]
Length = 809
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 31/185 (16%)
Query: 681 RDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKV 737
+ Y L L ++V QD+A+ +IS+A+ R + G + R +GS FLGP V
Sbjct: 500 KKYLELEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGS-------FLFLGPTGV 552
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY 795
GK ++A ALAE++F ++ LI D+S F +L G V Y
Sbjct: 553 GKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGY 599
Query: 796 -----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
+ ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I +
Sbjct: 600 EEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIII 658
Query: 851 ATSTI 855
TS +
Sbjct: 659 MTSNL 663
>gi|429204139|ref|ZP_19195432.1| ATP-binding Clp protease subunit [Lactobacillus saerimneri 30a]
gi|428147638|gb|EKW99861.1| ATP-binding Clp protease subunit [Lactobacillus saerimneri 30a]
Length = 821
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 87/172 (50%), Gaps = 23/172 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +++A+ R R G G R +GS FLGP VGK ++A AL
Sbjct: 515 LHRQVVGQDEAVVAVAKAIRRARSGLGDPNRPIGS-------FMFLGPTGVGKTELAKAL 567
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
A+ VFG++ +I +D+S + ++ G V D + ++ R
Sbjct: 568 AQAVFGSEDSMIRIDMS---------EYMEKYSVSRLVGSPPGYVGYDEGGQLTEKVRQH 618
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSVV L++++K A P V + L + + G TDS GR V+ I + TS +
Sbjct: 619 PYSVVLLDEVEK-AHPDVFNLLLQVLDDGYLTDSKGRKVNFQNTIIIMTSNL 669
>gi|147676618|ref|YP_001210833.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
gi|146272715|dbj|BAF58464.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
Length = 810
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 27/174 (15%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L ++V QDEAI +S+A+ R R G + KR I FLGP VGK ++A ALAE
Sbjct: 507 LHQRVVGQDEAIRAVSRAIRRARAGL-----KDPKRPIGSFIFLGPTGVGKTELARALAE 561
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQE-------FR 801
++FG++ ++ +D+S F +L G Y+E R
Sbjct: 562 VLFGSEDAMVRIDMSEYME-------------KFAVSRLVGAPPGYVGYEEGGQLTEAVR 608
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+PY+VV L++++K A P V + L + + G+ TD+ GR V + + TS +
Sbjct: 609 RRPYTVVLLDEIEK-AHPDVFNILLQVMEDGRLTDAKGRTVDFRNTVIIMTSNV 661
>gi|52079919|ref|YP_078710.1| ATP-dependent Clp protease-like (class III stress gene) ClpE
[Bacillus licheniformis DSM 13 = ATCC 14580]
gi|404488801|ref|YP_006712907.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52003130|gb|AAU23072.1| ATP-dependent Clp protease-like (class III stress gene) ClpE
[Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52347792|gb|AAU40426.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Bacillus
licheniformis DSM 13 = ATCC 14580]
Length = 698
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + K L L+ +V Q EA+ +++AV R R G R VGS F+GP
Sbjct: 394 DQKKMKELEAHLSSRVIGQKEAVKKVAKAVRRSRAGLKSKNRPVGS-------FLFVGPT 446
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDY 795
VGK +++ LAE +FG K +I +D+ SE S + + G+
Sbjct: 447 GVGKTELSKRLAEELFGTKDAIIRLDM-SEYMEKHAVSKLIGSPPGYVGHEEAGQ----- 500
Query: 796 IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ ++ R PYS+V L++++K A P VQ + + G+ TDS GR VS + + TS
Sbjct: 501 LTEKVRRNPYSIVLLDEIEK-AHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSNA 559
Query: 856 LKGKHSVHPQTTPVKFS-EEIILG 878
V + T V F+ EE ++G
Sbjct: 560 -----GVSEKRTTVGFNREEQVMG 578
>gi|50915108|ref|YP_061080.1| ClpC [Streptococcus pyogenes MGAS10394]
gi|50904182|gb|AAT87897.1| ClpC [Streptococcus pyogenes MGAS10394]
Length = 814
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG--NGR-DVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD A+ IS+A+ R + G G+ +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQDAAVTAISRAIRRNQSGIRTGKCPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDEAALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + Q+ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTQKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGILTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|423681849|ref|ZP_17656688.1| ATP-dependent Clp protease-like (class III stress gene) ClpE
[Bacillus licheniformis WX-02]
gi|383438623|gb|EID46398.1| ATP-dependent Clp protease-like (class III stress gene) ClpE
[Bacillus licheniformis WX-02]
Length = 698
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + K L L+ +V Q EA+ +++AV R R G R VGS F+GP
Sbjct: 394 DQKKMKELEANLSSRVIGQKEAVKKVAKAVRRSRAGLKSKNRPVGS-------FLFVGPT 446
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDY 795
VGK +++ LAE +FG K +I +D+ SE S + + G+
Sbjct: 447 GVGKTELSKRLAEELFGTKDAIIRLDM-SEYMEKHAVSKLIGSPPGYVGHEEAGQ----- 500
Query: 796 IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ ++ R PYS+V L++++K A P VQ + + G+ TDS GR VS + + TS
Sbjct: 501 LTEKVRRNPYSIVLLDEIEK-AHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSNA 559
Query: 856 LKGKHSVHPQTTPVKFS-EEIILG 878
V + T V F+ EE ++G
Sbjct: 560 -----GVSEKRTTVGFNREEQVMG 578
>gi|422728728|ref|ZP_16785136.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0012]
gi|315150882|gb|EFT94898.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0012]
Length = 831
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 465 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 520
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 521 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 573
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 574 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 627
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 628 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|429727179|ref|ZP_19261957.1| ATP-dependent chaperone protein ClpB [Prevotella sp. oral taxon 473
str. F0040]
gi|429144530|gb|EKX87640.1| ATP-dependent chaperone protein ClpB [Prevotella sp. oral taxon 473
str. F0040]
Length = 896
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 87/182 (47%), Gaps = 31/182 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEAI ++ AV R R G R +GS FLG VGK ++A AL
Sbjct: 584 LHARVIGQDEAITAVADAVRRSRAGLQDPKRPIGS-------FIFLGATGVGKTELAKAL 636
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +F ++ + +D+S Q F +L G V Y + +
Sbjct: 637 AECLFDDENMMTRIDMSEYQE-------------KFSATRLIGAPPGYVGYDEGGQLTEA 683
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
R KPYSVV ++++KA P V + L + + G+ TD+ GR V+ I + TS +L GK
Sbjct: 684 VRRKPYSVVLFDEIEKA-HPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLLTGK 742
Query: 860 HS 861
+
Sbjct: 743 ET 744
>gi|256760910|ref|ZP_05501490.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T3]
gi|307288063|ref|ZP_07568079.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0109]
gi|422704997|ref|ZP_16762805.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1302]
gi|256682161|gb|EEU21856.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T3]
gi|306500941|gb|EFM70256.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0109]
gi|315163552|gb|EFU07569.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1302]
Length = 831
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 465 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 520
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 521 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 573
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 574 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 627
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 628 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|407475965|ref|YP_006789842.1| class III stress response-related ATPase [Exiguobacterium
antarcticum B7]
gi|407060044|gb|AFS69234.1| class III stress response-related ATPase [Exiguobacterium
antarcticum B7]
Length = 815
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 17/166 (10%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V Q+EA+ +IS+A+ R R G R +GS FLGP VGK ++A A+AE
Sbjct: 509 RVIGQNEAVKSISKAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAVAEA 561
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG++ +I +D+ SE S + + G+ + ++ R KPYSV+
Sbjct: 562 MFGDEDAIIRIDM-SEYMEKHATSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYSVIL 615
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G+ TDS GR V I V TS +
Sbjct: 616 LDEIEK-AHPEVFNILLQVLDDGRLTDSKGRTVDFRNTIIVMTSNV 660
>gi|134103380|ref|YP_001109041.1| Clp protease ATP binding subunit [Saccharopolyspora erythraea NRRL
2338]
gi|291004401|ref|ZP_06562374.1| Clp protease ATP binding subunit [Saccharopolyspora erythraea NRRL
2338]
gi|133916003|emb|CAM06116.1| clp protease ATP binding subunit [Saccharopolyspora erythraea NRRL
2338]
Length = 828
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 26/218 (11%)
Query: 647 SISAEFDAVSEGTFHNVVQSSSCSAPHTGEPF----DPRDYKTLRI--ALAEKVGWQDEA 700
IS + VS+ T H++ + S TG P + + L++ AL E+V Q+EA
Sbjct: 486 GISERREGVSDVTGHDIAEVLSR---RTGIPVAQLTESEKERLLKLEEALHERVVGQEEA 542
Query: 701 ICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKL 757
+ +++AV R G G R VGS FLGP VGK ++A ALA ++FG++ +L
Sbjct: 543 VTAVAEAVRRSLAGMGDPDRPVGS-------FLFLGPTGVGKTELAKALAGLLFGDEDRL 595
Query: 758 IHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAA 817
+ D+S Q + + + + G+ + + R +PYSV+ ++++KA
Sbjct: 596 VRFDMSEFQERHTVSRLVGAPP-GYVGHEEAGQ-----LTERVRRQPYSVLLFDEIEKAH 649
Query: 818 DPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ ++L + + G+ TD+ GR V + + TS I
Sbjct: 650 QDVF-NALLQVLDDGRLTDAQGRTVDFRNTVVIMTSNI 686
>gi|433446336|ref|ZP_20410395.1| ATP-dependent Clp protease, ATP-binding subunitClpE [Anoxybacillus
flavithermus TNO-09.006]
gi|432000632|gb|ELK21526.1| ATP-dependent Clp protease, ATP-binding subunitClpE [Anoxybacillus
flavithermus TNO-09.006]
Length = 700
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 17/173 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA+KV Q+EA+ I++A+ R R G R +GS F+GP VGK
Sbjct: 411 KHLEENLAKKVIGQEEAVRKIAKAIRRSRAGLKAKNRPIGS-------FLFVGPTGVGKT 463
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
+++ LAE +FG+K +I +D+S + + + + G+ + ++
Sbjct: 464 ELSKTLAEQLFGSKDAMIRLDMSEYMEKHAVSKLIGAPP-GYIGHEEAGQ-----LTEKV 517
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
R PYS++ L++++K A P VQ + + G+ TDS GR VS + + TS
Sbjct: 518 RRNPYSIILLDEMEK-AHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTS 569
>gi|357639453|ref|ZP_09137326.1| ATPase, AAA family [Streptococcus urinalis 2285-97]
gi|418417014|ref|ZP_12990212.1| hypothetical protein HMPREF9318_00960 [Streptococcus urinalis
FB127-CNA-2]
gi|357587907|gb|EHJ57315.1| ATPase, AAA family [Streptococcus urinalis 2285-97]
gi|410873070|gb|EKS21006.1| hypothetical protein HMPREF9318_00960 [Streptococcus urinalis
FB127-CNA-2]
Length = 813
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D R Y L L ++V QD+A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSRKYLQLEKELHKRVIGQDDAVSAISKAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+ PYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTEKVRNNPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|424760005|ref|ZP_18187660.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis R508]
gi|402404076|gb|EJV36710.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis R508]
Length = 831
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 465 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 520
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 521 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 573
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 574 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 627
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 628 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|257080312|ref|ZP_05574673.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis E1Sol]
gi|256988342|gb|EEU75644.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis E1Sol]
Length = 831
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 465 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 520
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 521 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 573
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 574 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 627
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 628 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|229547309|ref|ZP_04436034.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX1322]
gi|229307548|gb|EEN73535.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX1322]
Length = 831
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 465 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 520
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 521 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 573
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 574 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 627
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 628 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|116492401|ref|YP_804136.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus pentosaceus ATCC 25745]
gi|116102551|gb|ABJ67694.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus pentosaceus ATCC 25745]
Length = 688
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 89/179 (49%), Gaps = 31/179 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L + V Q+EA+ IS+A+ R RIG GR +GS F+GP VGK ++A L
Sbjct: 393 LKDHVIGQNEAVDKISRAIRRNRIGLNGTGRPIGS-------FLFVGPTGVGKTELAKQL 445
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
A+ +FG+K +I D+S +P+SI KL G V Y + ++
Sbjct: 446 AQQLFGSKDSMIRFDMSE---YMEPHSI----------SKLIGSPPGYVGYEEAGQLTEQ 492
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R PYS+V L++++KA P V + + G+ TDS GR VS I + TS G
Sbjct: 493 VRRHPYSLVLLDEVEKAH-PDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGTG 550
>gi|29377725|ref|NP_816879.1| ATP-dependent Clp protease, ATP-binding protein ClpC [Enterococcus
faecalis V583]
gi|227517135|ref|ZP_03947184.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX0104]
gi|227555222|ref|ZP_03985269.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis HH22]
gi|257088425|ref|ZP_05582786.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis D6]
gi|257418098|ref|ZP_05595092.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis T11]
gi|422714244|ref|ZP_16770976.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0309A]
gi|422716305|ref|ZP_16773016.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0309B]
gi|422721899|ref|ZP_16778478.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2137]
gi|424672474|ref|ZP_18109436.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis 599]
gi|424677514|ref|ZP_18114366.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV103]
gi|424680868|ref|ZP_18117664.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV116]
gi|424682811|ref|ZP_18119573.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV129]
gi|424688566|ref|ZP_18125171.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV25]
gi|424690735|ref|ZP_18127267.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV31]
gi|424694470|ref|ZP_18130873.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV37]
gi|424697804|ref|ZP_18134116.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV41]
gi|424701101|ref|ZP_18137278.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV62]
gi|424704695|ref|ZP_18140790.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV63]
gi|424711826|ref|ZP_18144038.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV65]
gi|424717779|ref|ZP_18147055.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV68]
gi|424721762|ref|ZP_18150839.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV72]
gi|424724563|ref|ZP_18153501.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV73]
gi|424727723|ref|ZP_18156352.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV81]
gi|424744327|ref|ZP_18172621.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV85]
gi|424753742|ref|ZP_18181671.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV93]
gi|29345193|gb|AAO82949.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Enterococcus
faecalis V583]
gi|227075415|gb|EEI13378.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis TX0104]
gi|227175651|gb|EEI56623.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis HH22]
gi|256996455|gb|EEU83757.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis D6]
gi|257159926|gb|EEU89886.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis T11]
gi|315028021|gb|EFT39953.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2137]
gi|315575413|gb|EFU87604.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0309B]
gi|315580852|gb|EFU93043.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0309A]
gi|402352709|gb|EJU87549.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV116]
gi|402354333|gb|EJU89144.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV103]
gi|402355646|gb|EJU90411.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis 599]
gi|402360230|gb|EJU94834.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV25]
gi|402363478|gb|EJU97957.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV31]
gi|402366381|gb|EJV00762.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV129]
gi|402370657|gb|EJV04854.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV37]
gi|402372546|gb|EJV06661.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV62]
gi|402374375|gb|EJV08400.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV41]
gi|402381195|gb|EJV14906.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV63]
gi|402382846|gb|EJV16484.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV65]
gi|402383726|gb|EJV17311.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV68]
gi|402390441|gb|EJV23784.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV72]
gi|402394441|gb|EJV27613.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV73]
gi|402395898|gb|EJV28978.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV81]
gi|402399294|gb|EJV32178.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV85]
gi|402403745|gb|EJV36401.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis ERV93]
Length = 831
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 465 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 520
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 521 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 573
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 574 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 627
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 628 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|418068835|ref|ZP_12706116.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus acidilactici MA18/5M]
gi|427442167|ref|ZP_18925557.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Pediococcus
lolii NGRI 0510Q]
gi|357538493|gb|EHJ22514.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus acidilactici MA18/5M]
gi|425786812|dbj|GAC46345.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Pediococcus
lolii NGRI 0510Q]
Length = 684
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 88/179 (49%), Gaps = 31/179 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L V QDEA+ IS+A+ R RIG GR +GS F+GP VGK ++A L
Sbjct: 390 LKAHVIGQDEAVDKISRAIRRNRIGLNGTGRPIGS-------FLFVGPTGVGKTELAKQL 442
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQE 799
A+ +FG+K +I D+S +P+SI KL G V Y + ++
Sbjct: 443 ADQLFGSKDAMIRFDMSE---YMEPHSI----------SKLIGSPPGYVGYEEAGQLTEQ 489
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R PYS++ L++++KA P V + + G+ TDS GR VS I + TS G
Sbjct: 490 VRRHPYSLILLDEVEKAH-PDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGSG 547
>gi|357236003|ref|ZP_09123346.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
criceti HS-6]
gi|356883985|gb|EHI74185.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
criceti HS-6]
Length = 813
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 46/224 (20%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ +S+A+ R R G R +GS FLGP
Sbjct: 502 DNQRYLNLERELHKRVIGQEDAVSAVSRAIRRNRSGIRTGKRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAELLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R KPYSV+ ++++K A P + + L + + G TDS GR V+ S I
Sbjct: 602 GYEEGGELTEKVRQKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRQVNFSNTI 660
Query: 849 FVATSTILKGKHSVHPQTTPVKFSEEIILGAKRWQMQTAISHGF 892
+ TS + T ++ + + GAK AISH +
Sbjct: 661 IIMTSNL---------GATALRDDKTVGFGAK------AISHDY 689
>gi|255974129|ref|ZP_05424715.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T2]
gi|307283899|ref|ZP_07564072.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0860]
gi|422736196|ref|ZP_16792461.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1341]
gi|255967001|gb|EET97623.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis T2]
gi|306503549|gb|EFM72796.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0860]
gi|315167028|gb|EFU11045.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1341]
Length = 831
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 465 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 520
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 521 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 573
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 574 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 627
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 628 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|256960597|ref|ZP_05564768.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis Merz96]
gi|293384400|ref|ZP_06630281.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis R712]
gi|293389786|ref|ZP_06634227.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis S613]
gi|312906551|ref|ZP_07765552.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis DAPTO 512]
gi|312910758|ref|ZP_07769596.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis DAPTO 516]
gi|256951093|gb|EEU67725.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis Merz96]
gi|291078248|gb|EFE15612.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis R712]
gi|291080912|gb|EFE17875.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis S613]
gi|310627420|gb|EFQ10703.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis DAPTO 512]
gi|311288957|gb|EFQ67513.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis DAPTO 516]
Length = 831
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 465 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 520
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 521 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 573
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 574 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 627
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 628 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|423299928|ref|ZP_17277953.1| hypothetical protein HMPREF1057_01094 [Bacteroides finegoldii
CL09T03C10]
gi|408473737|gb|EKJ92259.1| hypothetical protein HMPREF1057_01094 [Bacteroides finegoldii
CL09T03C10]
Length = 842
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 103/214 (48%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD AI + +A+ R R+G +D N G ++ FLGP VGK +A LA+
Sbjct: 536 LQSKVIAQDTAIEKLVKAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKELAKY 591
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 592 MFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 638
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I G +
Sbjct: 639 KPYSIVLLDEIEK-AHPDVFNILLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--GTRQL 695
Query: 863 HPQTTPVKFSEEIILGAK---RWQMQTAISHGFA 893
V F+ + L AK R +Q A++ FA
Sbjct: 696 KEFGRGVGFATQSRLDAKEFSRSVIQKALNKSFA 729
>gi|421894715|ref|ZP_16325200.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Pediococcus
pentosaceus IE-3]
gi|385272323|emb|CCG90572.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Pediococcus
pentosaceus IE-3]
Length = 688
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 89/179 (49%), Gaps = 31/179 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L + V Q+EA+ IS+A+ R RIG GR +GS F+GP VGK ++A L
Sbjct: 393 LKDHVIGQNEAVDKISRAIRRNRIGLNGTGRPIGS-------FLFVGPTGVGKTELAKQL 445
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
A+ +FG+K +I D+S +P+SI KL G V Y + ++
Sbjct: 446 AQQLFGSKDSMIRFDMSE---YMEPHSI----------SKLIGSPPGYVGYEEAGQLTEQ 492
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R PYS+V L++++KA P V + + G+ TDS GR VS I + TS G
Sbjct: 493 VRRHPYSLVLLDEVEKAH-PDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGTG 550
>gi|229547888|ref|ZP_04436613.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis ATCC 29200]
gi|229306909|gb|EEN72905.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis ATCC 29200]
Length = 831
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 465 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 520
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 521 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 573
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 574 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 627
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 628 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|257792794|ref|YP_003183400.1| ATP-dependent chaperone ClpB [Eggerthella lenta DSM 2243]
gi|317489076|ref|ZP_07947601.1| ATP-dependent chaperone ClpB [Eggerthella sp. 1_3_56FAA]
gi|325831045|ref|ZP_08164369.1| ATP-dependent chaperone protein ClpB [Eggerthella sp. HGA1]
gi|257476691|gb|ACV57011.1| ATP-dependent chaperone ClpB [Eggerthella lenta DSM 2243]
gi|316911808|gb|EFV33392.1| ATP-dependent chaperone ClpB [Eggerthella sp. 1_3_56FAA]
gi|325486966|gb|EGC89412.1| ATP-dependent chaperone protein ClpB [Eggerthella sp. HGA1]
Length = 887
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +++ A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 575 LHERVVGQDEAVSSVAGAIRRNRAGLSDPNRPIGS-------FLFLGPTGVGKTELAKAL 627
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +F ++ ++ +D +S+ F Q + G + + R KPYS
Sbjct: 628 AEYLFDSEKAMVRID------MSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRKPYS 681
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TD GR VS I + TS +
Sbjct: 682 VILLDEIEK-AHPDVFNILLQVLDDGRLTDGQGRVVSFKNAIIIMTSNV 729
>gi|172056112|ref|YP_001812572.1| ATPase [Exiguobacterium sibiricum 255-15]
gi|171988633|gb|ACB59555.1| ATPase AAA-2 domain protein [Exiguobacterium sibiricum 255-15]
Length = 815
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 17/166 (10%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V Q+EA+ +IS+A+ R R G R +GS FLGP VGK ++A A+AE
Sbjct: 509 RVIGQNEAVKSISKAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAVAEA 561
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG++ +I +D+ SE S + + G+ + ++ R KPYSV+
Sbjct: 562 MFGDEDAIIRIDM-SEYMEKHATSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYSVIL 615
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G+ TDS GR V I V TS +
Sbjct: 616 LDEIEK-AHPEVFNILLQVLDDGRLTDSKGRTVDFRNTIIVMTSNV 660
>gi|380032170|ref|YP_004889161.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus
plantarum WCFS1]
gi|342241413|emb|CCC78647.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus
plantarum WCFS1]
Length = 739
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 91/185 (49%), Gaps = 31/185 (16%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
KTL L V QD+A+ +S+A+ R RIG GR +GS F+GP VGK
Sbjct: 438 KTLAPDLKSTVIGQDQAVEAVSRAIRRNRIGLNGTGRPIGS-------FMFVGPTGVGKT 490
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY--- 795
++A LA+ +FG++ +I D+S +P+S+ KL G V Y
Sbjct: 491 ELAKQLAKELFGSQDAMIRFDMSE---YMEPHSV----------AKLIGSPPGYVGYEEA 537
Query: 796 --IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ ++ R PYS+V L++++K A P V + + G+ TDS GR VS I + TS
Sbjct: 538 GQLTEQVRRHPYSLVLLDEVEK-AHPDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTS 596
Query: 854 TILKG 858
G
Sbjct: 597 NAGTG 601
>gi|422719707|ref|ZP_16776335.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0017]
gi|315032999|gb|EFT44931.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0017]
Length = 831
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 465 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 520
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 521 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 573
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 574 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 627
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 628 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|257083072|ref|ZP_05577433.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis Fly1]
gi|256991102|gb|EEU78404.1| ATP-dependent Clp protease, ATP-binding subunit [Enterococcus
faecalis Fly1]
Length = 831
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 465 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 520
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 521 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 573
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 574 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 627
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 628 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|448237139|ref|YP_007401197.1| ATP-dependent Clp protease ATP-binding subunit [Geobacillus sp.
GHH01]
gi|445205981|gb|AGE21446.1| ATP-dependent Clp protease ATP-binding subunit [Geobacillus sp.
GHH01]
Length = 710
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA+KV Q EA+ +++A+ R R G R +GS F+GP VGK
Sbjct: 413 KHLEENLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPIGS-------FLFVGPTGVGKT 465
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQ 798
++A LAE +FG K LI +D+S + + + F + + +
Sbjct: 466 ELAKTLAEELFGTKDALIRLDMSEYMEKHSVSKLIGSPPGYVGFEEA--------GQLTE 517
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ R PYS++ L++++K A P VQ + + G+ TDS GR VS + +ATS
Sbjct: 518 KVRRNPYSIILLDEIEK-AHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATS 571
>gi|384517059|ref|YP_005704364.1| clpC ATPase [Enterococcus faecalis 62]
gi|323479192|gb|ADX78631.1| clpC ATPase [Enterococcus faecalis 62]
Length = 831
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 465 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 520
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 521 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 573
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 574 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 627
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 628 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|255970546|ref|ZP_05421132.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis T1]
gi|256617980|ref|ZP_05474826.1| UvrB/UvrC protein [Enterococcus faecalis ATCC 4200]
gi|256958535|ref|ZP_05562706.1| UvrB/UvrC protein [Enterococcus faecalis DS5]
gi|257078149|ref|ZP_05572510.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis JH1]
gi|257091493|ref|ZP_05585854.1| ATP-dependent Clp protease ATP-binding subunit [Enterococcus
faecalis CH188]
gi|257420295|ref|ZP_05597285.1| ATP-dependent Clp protease [Enterococcus faecalis X98]
gi|294780724|ref|ZP_06746084.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis PC1.1]
gi|307270010|ref|ZP_07551335.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4248]
gi|307274514|ref|ZP_07555695.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2134]
gi|312899758|ref|ZP_07759078.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0470]
gi|312905574|ref|ZP_07764688.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0635]
gi|312953740|ref|ZP_07772573.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0102]
gi|384514494|ref|YP_005709587.1| ATPase/chaperone ClpC [Enterococcus faecalis OG1RF]
gi|397701405|ref|YP_006539193.1| clpC ATPase [Enterococcus faecalis D32]
gi|421513228|ref|ZP_15960008.1| ATP-dependent Clp protease [Enterococcus faecalis ATCC 29212]
gi|422690562|ref|ZP_16748612.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0630]
gi|422692538|ref|ZP_16750555.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0031]
gi|422694175|ref|ZP_16752177.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4244]
gi|422698655|ref|ZP_16756547.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1346]
gi|422700278|ref|ZP_16758127.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1342]
gi|422708175|ref|ZP_16765709.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0043]
gi|422710749|ref|ZP_16767703.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0027]
gi|422726124|ref|ZP_16782578.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0312]
gi|422731699|ref|ZP_16788055.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0645]
gi|430356044|ref|ZP_19424742.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis OG1X]
gi|255961564|gb|EET94040.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis T1]
gi|256597507|gb|EEU16683.1| UvrB/UvrC protein [Enterococcus faecalis ATCC 4200]
gi|256949031|gb|EEU65663.1| UvrB/UvrC protein [Enterococcus faecalis DS5]
gi|256986179|gb|EEU73481.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis JH1]
gi|257000305|gb|EEU86825.1| ATP-dependent Clp protease ATP-binding subunit [Enterococcus
faecalis CH188]
gi|257162119|gb|EEU92079.1| ATP-dependent Clp protease [Enterococcus faecalis X98]
gi|294452164|gb|EFG20606.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis PC1.1]
gi|306508786|gb|EFM77875.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2134]
gi|306513675|gb|EFM82282.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4248]
gi|310628344|gb|EFQ11627.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0102]
gi|310631303|gb|EFQ14586.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0635]
gi|311293110|gb|EFQ71666.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0470]
gi|315035218|gb|EFT47150.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0027]
gi|315148386|gb|EFT92402.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4244]
gi|315152751|gb|EFT96767.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0031]
gi|315154576|gb|EFT98592.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0043]
gi|315158946|gb|EFU02963.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0312]
gi|315162279|gb|EFU06296.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0645]
gi|315171228|gb|EFU15245.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1342]
gi|315172856|gb|EFU16873.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1346]
gi|315576520|gb|EFU88711.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0630]
gi|327536383|gb|AEA95217.1| ATPase/chaperone ClpC, probable specificity factor for ClpP
protease [Enterococcus faecalis OG1RF]
gi|397338044|gb|AFO45716.1| clpC ATPase [Enterococcus faecalis D32]
gi|401673667|gb|EJS80045.1| ATP-dependent Clp protease [Enterococcus faecalis ATCC 29212]
gi|429514421|gb|ELA03970.1| ATPase/chaperone ClpC, specificity factor for ClpP protease
[Enterococcus faecalis OG1X]
Length = 831
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 465 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 520
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 521 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 573
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 574 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 627
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 628 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|300861491|ref|ZP_07107575.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecalis TUSoD Ef11]
gi|422741397|ref|ZP_16795423.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2141]
gi|428768366|ref|YP_007154477.1| Clp protease [Enterococcus faecalis str. Symbioflor 1]
gi|295114559|emb|CBL33196.1| ATPases with chaperone activity, ATP-binding subunit [Enterococcus
sp. 7L76]
gi|300848952|gb|EFK76705.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
faecalis TUSoD Ef11]
gi|315143909|gb|EFT87925.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX2141]
gi|427186539|emb|CCO73763.1| Clp protease [Enterococcus faecalis str. Symbioflor 1]
Length = 831
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 465 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 520
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 521 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 573
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 574 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 627
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 628 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|218296422|ref|ZP_03497165.1| ATPase AAA-2 domain protein [Thermus aquaticus Y51MC23]
gi|218243216|gb|EED09747.1| ATPase AAA-2 domain protein [Thermus aquaticus Y51MC23]
Length = 740
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 15/166 (9%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q+EAI ++ A+ R R+G +G ++ F+G VGK ++A ALAE+
Sbjct: 451 LRKRVVGQEEAIKALANALRRARVG----LGGRTRVAASFLFVGQSGVGKTQLAKALAEV 506
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNI--DFCDCKLRGKVLVDYIYQEFRSKPYSV 807
+FG++ LI D+S Q +P+SI + + G+ + + R +P+SV
Sbjct: 507 LFGSERALIRFDMSEFQ---EPHSISKLIGAPPGYVGYEQGGR-----LTEAVRRQPFSV 558
Query: 808 VFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
V L++++K A P + ++ + + G+ TD GR V +I + TS
Sbjct: 559 VLLDEIEK-AHPDIYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTS 603
>gi|56961903|ref|YP_173625.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
clausii KSM-K16]
gi|56908137|dbj|BAD62664.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
clausii KSM-K16]
Length = 818
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V Q+EA+ +IS+A+ R R G R +GS FLGP VGK ++A A+
Sbjct: 512 LHERVVGQEEAVKSISKAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAV 564
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 565 AETLFGDEDAVIRIDM-SEYMEKHATSRLVGSPPGYVGHEEGGQ-----LTEKIRRKPYS 618
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TDS GR V + TS +
Sbjct: 619 VILLDEIEK-AHPDVFNLLLQVLEDGRLTDSKGRTVDFRNTAVIMTSNV 666
>gi|366090489|ref|ZP_09456855.1| ATP-binding Clp protease subunit [Lactobacillus acidipiscis KCTC
13900]
Length = 823
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 96/197 (48%), Gaps = 32/197 (16%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EAI IS+A+ R R G G R +GS FLGP VGK ++A AL
Sbjct: 511 LHKRVIGQNEAIAAISKAIRRARSGLGDPTRPIGS-------FMFLGPTGVGKTELAKAL 563
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
A +FG++ ++ +D+S + + G V D + ++ R+K
Sbjct: 564 AGAMFGDEDNMVRIDMSEYMEKYSTSRLIGAPP---------GYVGYDEGGQLSEKVRNK 614
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVH 863
PYSVV L++++K A P V + L + + G TDS GR V I + TS +
Sbjct: 615 PYSVVLLDEVEK-AHPDVFNILLQVLDDGFLTDSKGRKVDFRNTIIIMTSNL-------- 665
Query: 864 PQTTPVKFSEEIILGAK 880
T ++ +E+ GAK
Sbjct: 666 -GATDIRDKKEVGFGAK 681
>gi|239985969|ref|ZP_04706633.1| putative chaperone [Streptomyces roseosporus NRRL 11379]
Length = 840
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 85/176 (48%), Gaps = 25/176 (14%)
Query: 693 KVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
++ QDEA+ +S+AV R R G G R VGS FLGP VGK ++A LAE+
Sbjct: 535 RIVGQDEAVTAVSEAVRRNRAGMGDPNRPVGS-------FLFLGPTGVGKTELAKTLAEL 587
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
+FG ++I D+S Q + G V D + ++ R PYS
Sbjct: 588 LFGQDDRMIRFDMSEFQEKHTVARLVGAPP---------GYVGYDEAGQLTEKVRRNPYS 638
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
VV ++++K A P V ++L + + G+ TD GR V + + TS I G H +
Sbjct: 639 VVLFDEVEK-AHPDVFNTLLQILDDGRLTDGQGRTVDFRHCVVIMTSNI--GAHRI 691
>gi|291442910|ref|ZP_06582300.1| chaperone [Streptomyces roseosporus NRRL 15998]
gi|291345857|gb|EFE72761.1| chaperone [Streptomyces roseosporus NRRL 15998]
Length = 842
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 85/176 (48%), Gaps = 25/176 (14%)
Query: 693 KVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
++ QDEA+ +S+AV R R G G R VGS FLGP VGK ++A LAE+
Sbjct: 537 RIVGQDEAVTAVSEAVRRNRAGMGDPNRPVGS-------FLFLGPTGVGKTELAKTLAEL 589
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
+FG ++I D+S Q + G V D + ++ R PYS
Sbjct: 590 LFGQDDRMIRFDMSEFQEKHTVARLVGAPP---------GYVGYDEAGQLTEKVRRNPYS 640
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
VV ++++K A P V ++L + + G+ TD GR V + + TS I G H +
Sbjct: 641 VVLFDEVEK-AHPDVFNTLLQILDDGRLTDGQGRTVDFRHCVVIMTSNI--GAHRI 693
>gi|374340693|ref|YP_005097429.1| chaperone ATPase [Marinitoga piezophila KA3]
gi|372102227|gb|AEX86131.1| ATPase with chaperone activity, ATP-binding subunit [Marinitoga
piezophila KA3]
Length = 832
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 17/189 (8%)
Query: 685 TLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKR--GIWLAFLGPDKVGKKKI 742
L L E+V QD+AI +S+A+ R R G + KR G++L FLGP VGK ++
Sbjct: 515 NLEAVLHERVIGQDDAIKAVSKAIRRARSGI-----KDPKRPTGVFL-FLGPTGVGKTEL 568
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A +AE +FG++ L+ +D +S+ F+ + G + + R
Sbjct: 569 AKTIAEYLFGDEKALVRID------MSEYMEKFNVSRLVGAPPGYVGYEEGGQLTEAVRR 622
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
+PYSV+ L++++K A P V + L + + G+ TDS GR V I + TS + G S+
Sbjct: 623 RPYSVILLDEIEK-AHPDVYNLLLQIMDDGRLTDSQGRIVDFRNSIIIMTSNL--GSESI 679
Query: 863 HPQTTPVKF 871
+ + F
Sbjct: 680 NKSKRSMGF 688
>gi|256854930|ref|ZP_05560294.1| ATP-dependent Clp protease [Enterococcus faecalis T8]
gi|307290756|ref|ZP_07570654.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0411]
gi|422684442|ref|ZP_16742680.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4000]
gi|256710490|gb|EEU25534.1| ATP-dependent Clp protease [Enterococcus faecalis T8]
gi|306498176|gb|EFM67695.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0411]
gi|315030822|gb|EFT42754.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX4000]
Length = 831
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 465 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 520
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 521 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 573
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 574 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 627
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 628 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|229917386|ref|YP_002886032.1| ATPase AAA [Exiguobacterium sp. AT1b]
gi|229468815|gb|ACQ70587.1| ATPase AAA-2 domain protein [Exiguobacterium sp. AT1b]
Length = 811
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QD+A+ +IS+A+ R R G R +GS FLGP VGK ++A A+
Sbjct: 506 LHNRVIGQDDAVKSISRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAV 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AEAMFGDEDAIIRIDM-SEYMEKHATSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 VILLDEIEK-AHPEVFNILLQVLDDGRLTDSKGRTVDFRNTVIIMTSNV 660
>gi|411005479|ref|ZP_11381808.1| chaperone [Streptomyces globisporus C-1027]
Length = 842
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 85/176 (48%), Gaps = 25/176 (14%)
Query: 693 KVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
++ QDEA+ +S+AV R R G G R VGS FLGP VGK ++A LAE+
Sbjct: 537 RIVGQDEAVTAVSEAVRRNRAGMGDPNRPVGS-------FLFLGPTGVGKTELAKTLAEL 589
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
+FG ++I D+S Q + G V D + ++ R PYS
Sbjct: 590 LFGQDDRMIRFDMSEFQEKHTVARLVGAPP---------GYVGYDEAGQLTEKVRRNPYS 640
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
VV ++++K A P V ++L + + G+ TD GR V + + TS I G H +
Sbjct: 641 VVLFDEVEK-AHPDVFNTLLQILDDGRLTDGQGRTVDFRHCVVIMTSNI--GAHRI 693
>gi|67921848|ref|ZP_00515365.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Crocosphaera watsonii WH 8501]
gi|67856440|gb|EAM51682.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Crocosphaera watsonii WH 8501]
Length = 789
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 27/174 (15%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L +K+ QD A+ +S+A+ R RIG N KR I F GP VGK ++ ALAE
Sbjct: 474 LHKKIIGQDAAVEAVSRAIRRARIGL-----QNPKRPIASFIFAGPTGVGKTELTKALAE 528
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQEFR 801
+FG+K +I +D+S +P ++ KL G V Y + + R
Sbjct: 529 FLFGSKDAMIRLDMSE---YMEPQTV----------SKLIGTAPGFVGYEEGGQLTEAVR 575
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYSVV ++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 576 RKPYSVVLFDEIEK-AHPDVFNLLLQLLEDGRLTDSKGRTVDFRNTLVIMTSNL 628
>gi|445497963|ref|ZP_21464818.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Janthinobacterium sp. HH01]
gi|444787958|gb|ELX09506.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Janthinobacterium sp. HH01]
Length = 862
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L E+V QDEAI +S A+ R R G N G ++ FLGP VGK ++ ALA
Sbjct: 571 LHERVVGQDEAIAAVSDAIRRSRAGLS---DPNRPYGSFM-FLGPTGVGKTELTKALAGF 626
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
+F + +I +D+S + ++ G V D Y+ + R KPYS
Sbjct: 627 LFDTEESMIRIDMS---------EFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRKPYS 677
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVH 863
V+ L++++K A P V + L +A+ G+ TD GR V + + TS + G H +
Sbjct: 678 VILLDEVEK-AHPDVFNVLLQALDDGRMTDGQGRTVDFKNTVIIMTSNL--GSHKIQ 731
>gi|416386179|ref|ZP_11684917.1| ATP-dependent Clp protease regulatory subunit [Crocosphaera
watsonii WH 0003]
gi|357264720|gb|EHJ13568.1| ATP-dependent Clp protease regulatory subunit [Crocosphaera
watsonii WH 0003]
Length = 789
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 27/174 (15%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L +K+ QD A+ +S+A+ R RIG N KR I F GP VGK ++ ALAE
Sbjct: 474 LHKKIIGQDAAVEAVSRAIRRARIGL-----QNPKRPIASFIFAGPTGVGKTELTKALAE 528
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQEFR 801
+FG+K +I +D+S +P ++ KL G V Y + + R
Sbjct: 529 FLFGSKDAMIRLDMSE---YMEPQTV----------SKLIGTAPGFVGYEEGGQLTEAVR 575
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYSVV ++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 576 RKPYSVVLFDEIEK-AHPDVFNLLLQLLEDGRLTDSKGRTVDFRNTLVIMTSNL 628
>gi|256963095|ref|ZP_05567266.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis HIP11704]
gi|307272616|ref|ZP_07553867.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0855]
gi|256953591|gb|EEU70223.1| UvrB/UvrC protein:AAA ATPase [Enterococcus faecalis HIP11704]
gi|306510718|gb|EFM79737.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX0855]
Length = 831
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 465 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 520
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 521 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 573
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 574 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 627
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 628 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|433458325|ref|ZP_20416259.1| ATPase [Arthrobacter crystallopoietes BAB-32]
gi|432193493|gb|ELK50214.1| ATPase [Arthrobacter crystallopoietes BAB-32]
Length = 867
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 24/231 (10%)
Query: 632 NTPKLIDNKEQ-CFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIAL 690
+TP + +N + G +SA V E ++ ++ D L L
Sbjct: 497 STPAVAENNDGGARPGVVSAPSAVVGEAEIAQIISRATGIPAARLTEGDRERLARLEDDL 556
Query: 691 AEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALA 747
++V QD A+ +++AV R R G GR VGS FLGP VGK ++A ALA
Sbjct: 557 HQRVIGQDAAVTALAKAVRRNRTGMGDEGRPVGS-------FLFLGPTGVGKTELAKALA 609
Query: 748 EIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKP 804
E +FG++ ++ D+S + + G V D + + R P
Sbjct: 610 ESLFGDENAMVRFDMSE---------YGERHTVSRLVGAPPGYVGYDEAGQLTERVRRHP 660
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
YSVV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 661 YSVVLLDEIEK-AHPDVFNLLLQVLDDGRLTDSQGRTVDFRNTVVIMTSNL 710
>gi|386317895|ref|YP_006014059.1| negative regulator of genetic competence clpC/mecB [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
gi|417751731|ref|ZP_12399999.1| negative regulator of genetic competence ClpC/MecB [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
gi|417928146|ref|ZP_12571534.1| Clp amino terminal domain protein [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|323128182|gb|ADX25479.1| negative regulator of genetic competence clpC/mecB [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
gi|333772492|gb|EGL49337.1| negative regulator of genetic competence ClpC/MecB [Streptococcus
dysgalactiae subsp. equisimilis SK1249]
gi|340766020|gb|EGR88546.1| Clp amino terminal domain protein [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
Length = 814
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQEDAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F + LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDASALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGMLTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|182420087|ref|ZP_02951321.1| negative regulator of genetic competence ClpC/mecB [Clostridium
butyricum 5521]
gi|237666342|ref|ZP_04526327.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376124|gb|EDT73711.1| negative regulator of genetic competence ClpC/mecB [Clostridium
butyricum 5521]
gi|237657541|gb|EEP55096.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium butyricum E4 str. BoNT E BL5262]
Length = 814
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 35/189 (18%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ +I++AV R R+G R +GS FLGP VGK +++ AL
Sbjct: 512 LHKRVIGQNEAVKSIARAVRRARVGIKDPNRPIGS-------FIFLGPTGVGKTELSKAL 564
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQE------- 799
AE +FG++ +I VD+S + +S+ KL G YI E
Sbjct: 565 AEAMFGDENSIIRVDMSE---YMESHSV----------AKLIG-APPGYIGHEDGGQLTE 610
Query: 800 -FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R KPYS+V L++++KA I + L + + G+ TD G+ V+ I + TS + G
Sbjct: 611 AVRRKPYSIVLLDEIEKAHQDIF-NILLQIMEDGRLTDGKGKVVNFKNTIIIMTSNV--G 667
Query: 859 KHSVHPQTT 867
H + Q T
Sbjct: 668 AHQIKKQKT 676
>gi|108761289|ref|YP_632993.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Myxococcus
xanthus DK 1622]
gi|108465169|gb|ABF90354.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Myxococcus
xanthus DK 1622]
Length = 884
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 22/195 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEAI +SQA+ R R G R +GS FLGP VGK ++A L
Sbjct: 575 LHERVIGQDEAIRVLSQAIRRARAGLKDESRPIGS-------FLFLGPTGVGKTELAKTL 627
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE++FG++ LI D+S + + + + G+ + + R +PYS
Sbjct: 628 AELLFGDEKALIRFDMSEYMEKHTVSRLVGAPP-GYVGYEEGGQ-----LTEAVRRRPYS 681
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
V+ ++++K A P V L + + G+ TD+ G V+ + + TS + G H + T
Sbjct: 682 VLLFDEVEK-AHPDVFHMLLQVLDDGRLTDAQGTVVNFKNTVIIGTSNL--GSHLIQEST 738
Query: 867 T---PVKFSEEIILG 878
P + E ++G
Sbjct: 739 ARKEPQERMRERVMG 753
>gi|302555193|ref|ZP_07307535.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
gi|302472811|gb|EFL35904.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
Length = 842
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 13/167 (7%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L ++V QDEA+ +S AV R R G +N R I FLGP VGK ++A ALAE
Sbjct: 537 LHQRVVGQDEAVRVVSDAVLRSRAGL-----ANPDRPIGSFLFLGPTGVGKTELARALAE 591
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG++ +++ +D+S Q + + + + G+ + + R PYS++
Sbjct: 592 ALFGSEDRMVRLDMSEYQERHTVSRLIGAPP-GYVGHEEAGQ-----LTEVVRRHPYSLL 645
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G+ TDS GR V + + V TS +
Sbjct: 646 LLDEVEK-AHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNL 691
>gi|354807343|ref|ZP_09040813.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
curvatus CRL 705]
gi|354514147|gb|EHE86124.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
curvatus CRL 705]
Length = 821
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 15/172 (8%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIAS 744
L L ++V Q+EAI +S+A+ R R G + KR I FLGP VGK ++A
Sbjct: 511 LEKVLHKRVVGQEEAISAVSRAIRRARSGL-----KDPKRPIGSFMFLGPTGVGKTELAK 565
Query: 745 ALAEIVFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSK 803
ALAE +FG++ LI VD+S +R S + + + G+ + ++ R+K
Sbjct: 566 ALAEAMFGSEDNLIRVDMSEYMERYSTSRLVGAAPG--YVGYEEGGQ-----LTEKVRNK 618
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSV+ ++++K A P + + L + + G TDS GR V I + TS +
Sbjct: 619 PYSVILFDEVEK-AHPDIFNILLQVLDDGYLTDSKGRKVDFRNTIMIMTSNL 669
>gi|377557267|ref|ZP_09786919.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
gastricus PS3]
gi|376165906|gb|EHS84838.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
gastricus PS3]
Length = 679
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ IS+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 373 LHQRVIGQDEAVRVISEAIRRSRSGLKDPQRPIGS-------FMFLGPTGVGKTELAKAL 425
Query: 747 AEIVFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPY 805
AE +FG++ ++I +D+S +R S + + + G+ + ++ R PY
Sbjct: 426 AEEMFGSRDQMIRIDMSEYMERYSTSRLVGAAPG--YVGYEEGGQ-----LTEQVRRHPY 478
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
SVV L++++K A P V + L + + G TDS GR V I + TS +
Sbjct: 479 SVVLLDEVEK-AHPDVFNLLLQVLDDGFLTDSQGRRVDFRNTILIMTSNL 527
>gi|222153838|ref|YP_002563015.1| stress response-related Clp ATPase [Streptococcus uberis 0140J]
gi|222114651|emb|CAR43700.1| putative stress response-related Clp ATPase [Streptococcus uberis
0140J]
Length = 813
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ IS+A+ R + G R +GS FLGP
Sbjct: 502 DSQKYLNLEKELHKRVIGQEDAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAELLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G+ TDS GR V S I
Sbjct: 602 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGQLTDSRGRKVDFSNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|322374182|ref|ZP_08048715.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. C150]
gi|321276887|gb|EFX53959.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptococcus
sp. C150]
Length = 816
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 505 DSKRYLNLEAELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 557
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A LAE++F ++ L+ D+S F +L G V
Sbjct: 558 GVGKTELAKTLAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 604
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 605 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 663
Query: 849 FVATSTI 855
+ TS +
Sbjct: 664 IIMTSNL 670
>gi|219939389|emb|CAM31939.1| heat shock protein-related [Arabidopsis thaliana]
gi|219939391|emb|CAM31940.1| heat shock protein-related [Arabidopsis thaliana]
Length = 249
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 92/199 (46%), Gaps = 23/199 (11%)
Query: 303 SGPGVVVNYGELKVLVSDSVST--------EAARFVVSQLTSLLKSGNGEKLWLIGAAMS 354
SG GV+V+ G+LK LV ST E R V +L LL+ G +LW IG A +
Sbjct: 26 SGGGVIVDLGDLKWLVEQPSSTQPPATLAVEVGRTAVVELRRLLEKFEG-RLWFIGTA-T 83
Query: 355 YETYLKMLAKFPGLDNDWDLQLLPIHWKSSLMGSFVPFGGFFSSPPDFKNPVRSKSHYST 414
ETYL+ P ++ DWDLQ + + K+ G F S K+ V +
Sbjct: 84 CETYLRCQVYHPSMETDWDLQAVSVAAKAPASGVFPRLANNLESFTPLKSFVPANRTLKC 143
Query: 415 LCYLCTEKLEQEVAALLKLESSDSVTDQCLDNLTSSDRIAALDTSKGVGTAKAKDDVTAL 474
C C + E+E+A + DSV+ + + + + + + AK D +
Sbjct: 144 -CPQCLQSYERELAEI------DSVSSPEVKSEVAQPK----QLPQWLLKAKPVDRLP-- 190
Query: 475 NAKIMELQRKWNDTCQSLH 493
AKI E+Q+KWND C LH
Sbjct: 191 QAKIEEVQKKWNDACVRLH 209
>gi|297804822|ref|XP_002870295.1| hypothetical protein ARALYDRAFT_915385 [Arabidopsis lyrata subsp.
lyrata]
gi|297316131|gb|EFH46554.1| hypothetical protein ARALYDRAFT_915385 [Arabidopsis lyrata subsp.
lyrata]
Length = 920
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L E+V QDEA+ ++ A+ R R+G GR G +L FLGP VGK ++A ALAE
Sbjct: 597 LHERVVGQDEAVKAVAAAILRSRVGLGR---PQQPSGSFL-FLGPTGVGKTELAKALAEQ 652
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+F ++ L+ +D+S S N + + + G+ + + R +PY VV
Sbjct: 653 LFYDENLLVRLDMSEYMDRSTVNKLIGAPP-GYIGHEEGGQ-----LTEPVRRRPYCVVL 706
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A+ V ++L + + G+ TDS+GR V + + TS +
Sbjct: 707 FDEVEK-ANVTVFNTLLQVLEDGRLTDSHGRTVDFKNTVIIMTSNL 751
>gi|386843476|ref|YP_006248534.1| clp protease ATP binding subunit [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374103777|gb|AEY92661.1| clp protease ATP binding subunit [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451796767|gb|AGF66816.1| clp protease ATP binding subunit [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 847
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ +S+AV R R G R +GS FLGP VGK ++A AL
Sbjct: 537 LHQRVVGQEEAVAVVSEAVLRSRAGLSSPNRPIGS-------FLFLGPTGVGKTELARAL 589
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +++ +D+S Q + + + + G+ + + R PYS
Sbjct: 590 AEALFGSEDRMVRLDMSEYQERHTVSRLVGAPP-GYVGHEEAGQ-----LTEVVRRHPYS 643
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++ L++++K A P V + L + + G+ TDS GR V + + V TS +
Sbjct: 644 LLLLDEVEK-AHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNL 691
>gi|433447284|ref|ZP_20410881.1| Class III stress response-related ATPase, ClpC subunit
[Anoxybacillus flavithermus TNO-09.006]
gi|431999948|gb|ELK20855.1| Class III stress response-related ATPase, ClpC subunit
[Anoxybacillus flavithermus TNO-09.006]
Length = 810
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AEAMFGDEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TDS GR V I + TS +
Sbjct: 613 VILLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNV 660
>gi|313673099|ref|YP_004051210.1| ATP-dependent chaperone clpb [Calditerrivibrio nitroreducens DSM
19672]
gi|312939855|gb|ADR19047.1| ATP-dependent chaperone ClpB [Calditerrivibrio nitroreducens DSM
19672]
Length = 866
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 92/174 (52%), Gaps = 27/174 (15%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L ++V QD+AI +IS+A+ R R G SN KR I FLGP VGK ++A ALAE
Sbjct: 570 LHKRVIGQDKAISSISEAIRRSRAG-----LSNPKRPIGSFIFLGPTGVGKTELAKALAE 624
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFR 801
+F ++ LI +D+S + +S+ KL G V Y + ++ R
Sbjct: 625 FLFDSEDALIRIDMSE---YMEKHSV----------AKLIGAPPGYVGYDEGGQLTEKVR 671
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+PYSV+ ++++K A P V + + + + G+ TDS GR VS + + TS I
Sbjct: 672 RRPYSVILFDEIEK-AHPDVFNIMLQILDDGRLTDSKGRVVSFKNTVIIMTSNI 724
>gi|430747124|ref|YP_007206253.1| chaperone ATPase [Singulisphaera acidiphila DSM 18658]
gi|430018844|gb|AGA30558.1| ATPase with chaperone activity, ATP-binding subunit [Singulisphaera
acidiphila DSM 18658]
Length = 842
Score = 77.0 bits (188), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 19/168 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
+ +KV Q EAI ISQAV R R G + KR I F GP VGK +A ALAE
Sbjct: 513 IQKKVISQTEAIKRISQAVRRSRSGL-----KDPKRPIGCFIFAGPTGVGKTLLAKALAE 567
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPY 805
+FG+ LI +D+S + N+ G V + + ++ R +PY
Sbjct: 568 FMFGDSDALIQIDMS---------EYMEKHNVSRLIGAPPGYVGYEEGGQLTEKIRRRPY 618
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+VV L++++K A P V + L + + G+ TDS+GR+V I + T+
Sbjct: 619 AVVLLDEIEK-AHPDVYNMLLQIMEEGRLTDSFGRNVDFKNTIIIMTT 665
>gi|323339619|ref|ZP_08079892.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
ruminis ATCC 25644]
gi|417974548|ref|ZP_12615358.1| negative regulator of genetic competence [Lactobacillus ruminis
ATCC 25644]
gi|323092944|gb|EFZ35543.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
ruminis ATCC 25644]
gi|346329069|gb|EGX97378.1| negative regulator of genetic competence [Lactobacillus ruminis
ATCC 25644]
Length = 834
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 34/225 (15%)
Query: 639 NKEQCFSGSISAEFDA--VSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGW 696
++++ ++G +SAE A VSE T V Q + + L L ++V
Sbjct: 472 DEKKEYAGIVSAEDVATVVSEWTGVPVTQLTKTESER---------LINLEKILHKRVVG 522
Query: 697 QDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGN 753
QDEAI +S+A+ R R G R +GS FLGP GK ++A ALAE +FG+
Sbjct: 523 QDEAIKAVSKAIRRARSGLSDPTRPIGS-------FMFLGPTGAGKTELAKALAEAMFGS 575
Query: 754 KGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFL 810
+ +I +D+S + + G V D + ++ R+KPYSVV L
Sbjct: 576 EDAMIRIDMSEYMEKYSTSRLIGAPP---------GYVGYDEGGQLTEKVRNKPYSVVLL 626
Query: 811 EDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P V + L + + G TDS GR V+ I + TS +
Sbjct: 627 DEVEK-AHPDVFNILLQVLDDGYLTDSKGRKVNFRNTIIIMTSNL 670
>gi|308272261|emb|CBX28867.1| Chaperone protein clpB [uncultured Desulfobacterium sp.]
gi|308272381|emb|CBX28986.1| Chaperone protein clpB [uncultured Desulfobacterium sp.]
Length = 860
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 23/172 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGN---GRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
LA +V QDEA+ +S AV R R G R +GS F+GP VGK ++A AL
Sbjct: 569 LAMRVIGQDEALEAVSNAVRRARSGMQDPNRPIGS-------FIFMGPTGVGKTELAKAL 621
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE +F ++ ++ +D+S + + G V D Y+ + R K
Sbjct: 622 AEFIFDSEQAMVRIDMSEYMEKHAVSRLIGAPP---------GYVGYDEGGYLTEAVRRK 672
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSVV ++++K A P V + L + + G+ TD +GR V I + TS +
Sbjct: 673 PYSVVLFDEIEK-AHPEVFNVLLQILDDGRMTDGHGRTVDFKNTIIIMTSNV 723
>gi|257417375|ref|ZP_05594369.1| UvrB/UvrC protein [Enterococcus faecalis ARO1/DG]
gi|257159203|gb|EEU89163.1| UvrB/UvrC protein [Enterococcus faecalis ARO1/DG]
Length = 831
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 465 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 520
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 521 VSQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 573
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 574 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 627
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 628 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 670
>gi|212637926|ref|YP_002314446.1| Class III stress response-related ATPase, ClpC [Anoxybacillus
flavithermus WK1]
gi|212559406|gb|ACJ32461.1| Class III stress response-related ATPase, ClpC [Anoxybacillus
flavithermus WK1]
Length = 813
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 509 LHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 561
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 562 AEAMFGDEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 615
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TDS GR V I + TS +
Sbjct: 616 VILLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIIIMTSNV 663
>gi|300742477|ref|ZP_07072498.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Rothia
dentocariosa M567]
gi|300381662|gb|EFJ78224.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Rothia
dentocariosa M567]
Length = 850
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 32/227 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V QD AI +S+A+ R R G + + G F GP VGK ++A ALAE
Sbjct: 515 LHKRVIGQDNAIKALSRAIRRTRAG----LKDPRRPGGSFIFAGPTGVGKTELAKALAEF 570
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG++ LI +D+S Q + +F + G+ + ++ R KP+SVV
Sbjct: 571 LFGDEDALITLDMSEYQEKHTVSRLFGAPP-GYVGYDEGGQ-----LTEKVRRKPFSVVL 624
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPV 869
++++KA + +SL + + G+ TDS GR V + + T+ + G V+ + PV
Sbjct: 625 FDEVEKAHTDLF-NSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL--GSRDVN-RRVPV 680
Query: 870 KFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPR-KENSNPE 915
F A+ HG AD R M +V KE+ PE
Sbjct: 681 GFQ--------------AMDHGDADYER---MQARVMENLKEHFRPE 710
>gi|295106465|emb|CBL04008.1| ATP-dependent chaperone ClpB [Gordonibacter pamelaeae 7-10-1-b]
Length = 886
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +++ A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 576 LHERVVGQDEAVSSVAGAIRRNRAGLSDPDRPIGS-------FLFLGPTGVGKTELAKAL 628
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +F ++ ++ +D +S+ F Q + G + + R KPYS
Sbjct: 629 AEYLFDSERAMVRID------MSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRKPYS 682
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TD GR VS I + TS +
Sbjct: 683 VVLLDEIEK-AHPDVFNILLQVLDDGRLTDGQGRVVSFKNAIIIMTSNV 730
>gi|251783432|ref|YP_002997737.1| negative regulator of genetic competence clpC/mecB [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
gi|242392064|dbj|BAH82523.1| negative regulator of genetic competence clpC/mecB [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
Length = 814
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQEDAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F + LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDASALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGMLTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|205372096|ref|ZP_03224913.1| class III stress response-related ATPase [Bacillus coahuilensis
m4-4]
Length = 816
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +S+AV R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHSRVIGQEEAVKAVSKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + G+ + ++ R KPYS
Sbjct: 559 AEAMFGDEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGYDEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 VILLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNV 660
>gi|430371703|ref|ZP_19429425.1| ATP-dependent Clp protease [Enterococcus faecalis M7]
gi|429515041|gb|ELA04572.1| ATP-dependent Clp protease [Enterococcus faecalis M7]
Length = 372
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 6 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 61
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 62 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 114
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 115 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 168
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 169 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 211
>gi|422867278|ref|ZP_16913875.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1467]
gi|329577560|gb|EGG58995.1| negative regulator of genetic competence ClpC/MecB [Enterococcus
faecalis TX1467]
Length = 700
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
+LI KE+ SG + V+E VV + E + L L ++V
Sbjct: 334 ELIAVKEKSLSGYSTQ----VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRV 389
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE +F
Sbjct: 390 VGQNEAVEAVSRAIRRARSGLKDPARPIGS-------FMFLGPTGVGKTELAKALAEAMF 442
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G++ LI VD+S + + + + G+ + ++ R +PYSV+ L+
Sbjct: 443 GSEEALIRVDMSEFMEKYSTSRLIGSPP-GYVGYEEGGQ-----LTEKIRQRPYSVILLD 496
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++K A P V + L + + G TD+ GR V I + TS +
Sbjct: 497 EVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNL 539
>gi|392330173|ref|ZP_10274789.1| negative regulator of genetic competence clpC/mecB [Streptococcus
canis FSL Z3-227]
gi|391420045|gb|EIQ82856.1| negative regulator of genetic competence clpC/mecB [Streptococcus
canis FSL Z3-227]
Length = 814
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQEDAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F + LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDASALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGMLTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|428776416|ref|YP_007168203.1| ATPase [Halothece sp. PCC 7418]
gi|428690695|gb|AFZ43989.1| ATPase AAA-2 domain protein [Halothece sp. PCC 7418]
Length = 798
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 19/174 (10%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIAS 744
L L E++ Q EA+ +S+A+ R R+G +DV R I F GP VGK ++
Sbjct: 480 LEDTLHERIIGQSEAVSAVSRAIRRARVGM-KDV----DRPIASFIFSGPTGVGKTELTK 534
Query: 745 ALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFR 801
ALA+ +FG++ +I +D+S D Q++ G V D ++ ++ R
Sbjct: 535 ALAQYMFGDEEAMIRLDMS---------EYMDPQSVSKLIGSPPGFVGYDEGGHLTEQVR 585
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+PY+VV L++++K A P V +SL + + G TDS GR V + + TS I
Sbjct: 586 RRPYTVVLLDEIEK-AHPDVFNSLLQILDDGHLTDSKGRKVDFKNTLIIMTSNI 638
>gi|333922411|ref|YP_004495991.1| ATPase AAA-2 domain-containing protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333747972|gb|AEF93079.1| ATPase AAA-2 domain protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 818
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 23/172 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QD+A+ +S+AV R R G R VGS FLGP VGK ++A AL
Sbjct: 511 LHQRVVGQDDAVKAVSRAVRRARAGLKDPKRPVGS-------FIFLGPTGVGKTELARAL 563
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE +FG++ L+ +D+S + + G V D + + R K
Sbjct: 564 AEALFGDEDALVRIDMS---------EYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRK 614
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSVV L++++K A P V + L + + G+ TD+ GR V + + TS +
Sbjct: 615 PYSVVLLDEIEK-AHPDVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSNV 665
>gi|408682245|ref|YP_006882072.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Streptomyces
venezuelae ATCC 10712]
gi|328886574|emb|CCA59813.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Streptomyces
venezuelae ATCC 10712]
Length = 853
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 19/173 (10%)
Query: 693 KVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
++ QDEA+ +S+AV R R G G R VGS FLGP VGK ++A LA +
Sbjct: 541 RIVGQDEAVTAVSEAVRRSRAGMGDPNRPVGS-------FLFLGPTGVGKTELAKTLAGL 593
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG++ ++I D+S Q + + + G+ + ++ R PYSVV
Sbjct: 594 LFGDEDRMIRFDMSEFQEKHTVARLVGAPP-GYVGYEEAGQ-----LTEKVRRNPYSVVL 647
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
++++K A P V ++L + + G+ TD GR V + + TS I G H +
Sbjct: 648 FDEVEK-AHPDVFNTLLQILDDGRLTDGQGRTVDFRHCVVIMTSNI--GAHRI 697
>gi|384134542|ref|YP_005517256.1| ATPase [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|339288627|gb|AEJ42737.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 679
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 17/173 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA V QDEA+ +++A+ R R+G R +GS F+GP VGK
Sbjct: 375 KNLEADLASVVIGQDEAVRQVARAIRRSRVGLRRGDRPIGS-------FLFVGPTGVGKT 427
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++A LAE++FG+K +I +D+S + + + + G+ + ++
Sbjct: 428 EMARRLAELLFGSKDAMIRLDMSEYMEKHSVSKLIGAPP-GYVGYEQAGQ-----LTEQV 481
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
R PYS++ +++++K A P VQ + + G+ TDS GR VS + + TS
Sbjct: 482 RRHPYSLILVDEIEK-AHPDVQHIFLQIMEDGRLTDSQGRTVSFKDTLIIMTS 533
>gi|444919655|ref|ZP_21239654.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cystobacter
fuscus DSM 2262]
gi|444708155|gb|ELW49249.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cystobacter
fuscus DSM 2262]
Length = 557
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 11/166 (6%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L E+V QDEAI +SQA+ R R G N G +L FLGP VGK ++A ALAE+
Sbjct: 244 LHERVIGQDEAIRALSQAIRRARAGLK---DPNKPIGSFL-FLGPTGVGKTELAKALAEL 299
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG++ LI D+S + + + + G+ + + R +PYSV+
Sbjct: 300 MFGDEKALIRFDMSEYMEKHTVSRLVGAPP-GYVGYEEGGQ-----LTEAVRRRPYSVLL 353
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P V L + + G+ TD+ G+ VS + + TS +
Sbjct: 354 FDEVEK-AHPDVFHILLQVLDDGRLTDAQGKVVSFKNTVIIGTSNL 398
>gi|427390984|ref|ZP_18885390.1| hypothetical protein HMPREF9233_00893 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732322|gb|EKU95132.1| hypothetical protein HMPREF9233_00893 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 866
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 14/206 (6%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKK 741
K LR+ L ++V Q EA+ ISQA+ R R G + ++ G F GP VGK +
Sbjct: 503 KLLRMEDELHKRVIGQHEAVTAISQAIRRQRAG----LKDPNRPGGSFIFAGPTGVGKTE 558
Query: 742 IASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFR 801
+A ALAE +FG++ LI +D+S + +F + + G+ + + R
Sbjct: 559 LAKALAEFLFGDESALITLDMSEYSEKHTVSRLFGAPP-GYVGYEEGGQ-----LTEAVR 612
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHS 861
KP+SVV ++++KA + +SL + + G+ TDS GR V I + T T L K
Sbjct: 613 RKPFSVVLFDEIEKAHADLF-NSLLQILEEGRLTDSQGRVVDFKNTIIIMT-TNLGTKDI 670
Query: 862 VHPQTTPVKFSEEIILGAKRWQMQTA 887
T +F ++ +R +M+ +
Sbjct: 671 AKGVQTGFQFDQDTTTSYERMKMKVS 696
>gi|317496540|ref|ZP_07954889.1| ATPase [Gemella morbillorum M424]
gi|316913343|gb|EFV34840.1| ATPase [Gemella morbillorum M424]
Length = 824
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ ++++AV R R G R +GS FLGP VGK ++A +L
Sbjct: 522 LHERVIGQDEAVTSLAKAVRRARSGFKAENRPIGS-------FIFLGPTGVGKTELAKSL 574
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
+E +F ++ +I +D+S +P+SI +L G V Y + ++
Sbjct: 575 SEALFSSEDNMIRIDMSE---YMEPHSI----------SRLVGAPPGYVGYEEAGQLSEQ 621
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV ++++K A P + + L + + G+ TD+ GR + I + TS +
Sbjct: 622 VRQKPYSVVLFDEIEK-AHPSIFNILLQVLDDGRLTDASGRTIDFKNTIIIMTSNV 676
>gi|311112373|ref|YP_003983595.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rothia
dentocariosa ATCC 17931]
gi|310943867|gb|ADP40161.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rothia
dentocariosa ATCC 17931]
Length = 850
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 38/230 (16%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V QD AI +S+A+ R R G + + G F GP VGK ++A ALAE
Sbjct: 515 LHKRVIGQDNAIKALSRAIRRTRAG----LKDPRRPGGSFIFAGPTGVGKTELAKALAEF 570
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
+FG++ LI +D+S Q + +F G V D + ++ R KP+S
Sbjct: 571 LFGDEDALITLDMSEYQEKHTVSRLFGAPP---------GYVGYDEGGQLTEKVRRKPFS 621
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
VV ++++KA + +SL + + G+ TDS GR V + + T+ + G V+ +
Sbjct: 622 VVLFDEVEKAHTDLF-NSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL--GSRDVN-RR 677
Query: 867 TPVKFSEEIILGAKRWQMQTAISHGFADAARGSGMNVKVTPR-KENSNPE 915
PV F A+ HG AD R M +V KE+ PE
Sbjct: 678 VPVGFQ--------------AMDHGDADYER---MQARVMENLKEHFRPE 710
>gi|365157357|ref|ZP_09353630.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
gi|363625258|gb|EHL76300.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
Length = 811
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHSRVIGQEEAVKAVAKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AEAMFGDEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGFEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 VILLDEIEK-AHPDVFNILLQVLEDGRLTDSKGRTVDFRNTVLIMTSNV 660
>gi|386354296|ref|YP_006052542.1| Clp protease ATP binding subunit [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|365804804|gb|AEW93020.1| Clp protease ATP binding subunit [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 845
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ ++ AV R R G R +GS FLGP VGK ++A AL
Sbjct: 546 LHQRVIGQDEAVTAVADAVLRSRAGLADPNRPIGS-------FLFLGPTGVGKTELARAL 598
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +++ +D+S Q + + G + + R PYS
Sbjct: 599 AEALFGSEDRMVRLDMSEYQERHTVSRLVGAP------PGYVGHDEAGQLTEAVRRHPYS 652
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+V L++++K A P V ++L + + G+ TD+ GR V + V TS +
Sbjct: 653 LVLLDEVEK-AHPDVFNTLLQVLDDGRLTDAQGRTVDFKNTVVVMTSNL 700
>gi|323703791|ref|ZP_08115429.1| ATPase AAA-2 domain protein [Desulfotomaculum nigrificans DSM 574]
gi|323531260|gb|EGB21161.1| ATPase AAA-2 domain protein [Desulfotomaculum nigrificans DSM 574]
Length = 818
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 23/172 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QD+A+ +S+AV R R G R VGS FLGP VGK ++A AL
Sbjct: 511 LHQRVVGQDDAVKAVSRAVRRARAGLKDPKRPVGS-------FIFLGPTGVGKTELARAL 563
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE +FG++ L+ +D+S + + G V D + + R K
Sbjct: 564 AEALFGDEDALVRIDMS---------EYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRK 614
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSVV L++++K A P V + L + + G+ TD+ GR V + + TS +
Sbjct: 615 PYSVVLLDEIEK-AHPDVFNILLQVLEDGRLTDAKGRTVDFRNTVIIMTSNV 665
>gi|257055183|ref|YP_003133015.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora viridis DSM 43017]
gi|256585055|gb|ACU96188.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora viridis DSM 43017]
Length = 846
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 11/166 (6%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L +V QDEA+ +++AV R R G + G +L FLGP VGK ++A ALAE
Sbjct: 536 LHGRVVGQDEAVSAVAEAVRRARTGLAE---PDRPSGSFL-FLGPTGVGKTELARALAEA 591
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG++ ++ +D+S + + + + G+ + + R KPYSV+
Sbjct: 592 LFGSEDHMVRLDMSEYGERHTASRLVGAPP-GYVGYEEAGQ-----LTEAVRRKPYSVIL 645
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G+ TD GR V+ + + + TS +
Sbjct: 646 LDEIEK-AHPDVFNLLLQVMDDGRLTDGRGRTVNFTNTVLIMTSNV 690
>gi|172035917|ref|YP_001802418.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp. ATCC
51142]
gi|354556035|ref|ZP_08975333.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
gi|171697371|gb|ACB50352.1| ATP-dependent Clp protease, regulatory subunit [Cyanothece sp. ATCC
51142]
gi|353552034|gb|EHC21432.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
Length = 789
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 22/200 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L E++ Q+EA+ +S+A+ R RIG N KR I F GP VGK ++ ALA+
Sbjct: 474 LHERIIGQEEAVKAVSKAIRRSRIGL-----QNPKRPIASFIFAGPTGVGKTELTKALAQ 528
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG+K +I +D+S + + F + G+ + + R KPYSVV
Sbjct: 529 FLFGSKDAMIRLDMSEYMERHTVSKLIGTAP-GFIGYEEGGQ-----LTEAVRRKPYSVV 582
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS-----TILKGKHSVH 863
++++K A P V + L + + G+ TDS GR V + + TS I KG ++
Sbjct: 583 LFDEIEK-AHPDVFNLLLQLLEDGRLTDSKGRTVDFRNTLIIMTSNLGSKVIEKGGYNFG 641
Query: 864 PQTTPVKFSEEIILGAKRWQ 883
+T S+++ L KR Q
Sbjct: 642 FETE----SDDVNLQYKRIQ 657
>gi|82408817|gb|ABB73202.1| heat shock protein 101 [Funaria hygrometrica]
Length = 908
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 87/166 (52%), Gaps = 11/166 (6%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L E+V QDEA+ +++A+ R R G GR G +L FLGP VGK ++A ALAE
Sbjct: 567 LHERVVGQDEAVQAVAEAILRSRAGLGR---QQQPTGSFL-FLGPTGVGKTELAKALAEQ 622
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+F + +L+ +D+S + + + + G+ + + R +PYSVV
Sbjct: 623 LFDKENQLVRMDMSEYMEQHSVSRLIGSPP-GYVGHEEGGQ-----LTEAVRRRPYSVVL 676
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P V ++L + + G+ TD GR V + + + TS +
Sbjct: 677 FDEVEK-AHPAVFNTLLQLLDDGRLTDGQGRTVDFTNTVVIMTSNL 721
Score = 47.4 bits (111), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 144/346 (41%), Gaps = 53/346 (15%)
Query: 32 HSQTTSLHVVSALLCVPSSLLREACDRVQSYSVSPKLQFRALELCLGVAFDRLPSSKSV- 90
H+Q T +H+ ALL LLR+A + + ++E L ++PS
Sbjct: 26 HAQYTPVHLALALLNDSEGLLRQAI----ASASGGDQTLNSVERVLKNTLKKIPSQNPAP 81
Query: 91 EFPPISNSLMAAIKRSQAQQRRNPDNYHLQQIHCNQQTASLLKVDLKYFVLAILDDPMAS 150
+ P +N+L+ IK++Q+ Q+ D++ L VD +LA+L+D +
Sbjct: 82 DASPANNALIKCIKKAQSLQKSRSDSH--------------LAVD--QLILALLEDSQIA 125
Query: 151 RVFGEAGFLSRDIK--LAIIQPSVTQFPPRLSLTRCPPIFLYNLTDSFPGRAGLKLPFGP 208
F EAG + +K L ++ S + + + + Y D A L G
Sbjct: 126 DCFKEAGVSATRVKRELEAVRRSSKKVDNANADSNFQALKKYG-RDLVEDAAKLDPVIGR 184
Query: 209 DDVDENCRRIGEVLAGRDEKKGKNPLLV---GVCANSALKGFVESVNGGKVGLFPRQIYG 265
DD RR+ +L+ R + NP+L+ GV + ++G + + G P +
Sbjct: 185 DD---EIRRVVRILSRRTK---NNPVLIGEPGVGKTAVVEGLAQRIVRGDA---PSNL-- 233
Query: 266 LDVVCVEYEINEFVGGRVN----VEMMMLKFKEVESAVGRCSGPGVVVNYGELKVLVSDS 321
L+V V ++ V G E + KEVE + G+ V++ E+ LV +
Sbjct: 234 LEVRLVALDMGALVAGAKYRGEFEERLKAVLKEVEDSDGK-----VILFIDEIH-LVLGA 287
Query: 322 VSTEAARFVVSQLTSLLKSGNGEKLWLIGAAM--SYETYLKMLAKF 365
TE + + L +L G +L IGA Y Y++ A F
Sbjct: 288 GRTEGSMDAANLLKPMLARG---QLRCIGATTLDEYRKYVEKDAAF 330
>gi|291520389|emb|CBK75610.1| C-terminal, D2-small domain, of ClpB protein./AAA domain (Cdc48
subfamily) [Butyrivibrio fibrisolvens 16/4]
Length = 505
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 84/170 (49%), Gaps = 23/170 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ +++AV R R+G GR +GS FLGP VGK +I+ AL
Sbjct: 203 LHKRVIGQEEAVSAVARAVRRGRVGLKEKGRPIGS-------FLFLGPTGVGKTEISKAL 255
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE VFG + +I VD+S + + G V D + ++ R
Sbjct: 256 AEAVFGTESSMIRVDMSEYMEKHSVSKMIGSPP---------GYVGYDEGGQLSEKVRRN 306
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
PYSV+ ++++K A P V + L + + G TDS GR V I + TS
Sbjct: 307 PYSVILFDEIEK-AHPDVFNVLLQILDDGHVTDSQGRKVDFKNTIIIMTS 355
>gi|329115750|ref|ZP_08244467.1| chaperone protein ClpB [Streptococcus parauberis NCFD 2020]
gi|326906155|gb|EGE53069.1| chaperone protein ClpB [Streptococcus parauberis NCFD 2020]
gi|456369788|gb|EMF48688.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Streptococcus
parauberis KRS-02109]
gi|457094452|gb|EMG24971.1| ATP-dependent Clp protease ATP-binding subunit [Streptococcus
parauberis KRS-02083]
Length = 814
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQEDAVSAISRAIRRNQSGIRTGRRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGMLTDSRGRRVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|153813963|ref|ZP_01966631.1| hypothetical protein RUMTOR_00170 [Ruminococcus torques ATCC 27756]
gi|317501491|ref|ZP_07959689.1| ATPase AAA-2 domain-containing protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|331088037|ref|ZP_08336958.1| hypothetical protein HMPREF1025_00541 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336439725|ref|ZP_08619331.1| hypothetical protein HMPREF0990_01725 [Lachnospiraceae bacterium
1_1_57FAA]
gi|145848359|gb|EDK25277.1| ATPase family associated with various cellular activities (AAA)
[Ruminococcus torques ATCC 27756]
gi|316897120|gb|EFV19193.1| ATPase AAA-2 domain-containing protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|330408993|gb|EGG88452.1| hypothetical protein HMPREF1025_00541 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336015317|gb|EGN45135.1| hypothetical protein HMPREF0990_01725 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 814
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 33/186 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D K L L ++V Q+EA+ +++AV R R+G R +GS FLGP
Sbjct: 497 DTDRLKKLESVLHQRVIGQEEAVKAVARAVKRGRVGLKDPKRPIGS-------FLFLGPT 549
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVS--------SEQRVSQPNSIFDCQNIDFCDCKL 787
VGK +++ ALAE +FGN+ +I VD+S S+ S P + + D
Sbjct: 550 GVGKTELSKALAEAMFGNEESMIRVDMSEYMEKHSVSKMIGSPPGYVGHEEGGQLSD--- 606
Query: 788 RGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
+ R+ PYSV+ ++++K A P V + L + + G TDS GR + S
Sbjct: 607 -----------QVRTHPYSVLLFDEIEK-AHPDVFNILLQVLDDGHITDSKGRKIDFSNT 654
Query: 848 IFVATS 853
+ + TS
Sbjct: 655 VIIMTS 660
>gi|357398262|ref|YP_004910187.1| ATP-dependent Clp protease ATP-binding subunit clpC [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|337764671|emb|CCB73380.1| ATP-dependent Clp protease ATP-binding subunit clpC [Streptomyces
cattleya NRRL 8057 = DSM 46488]
Length = 840
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ ++ AV R R G R +GS FLGP VGK ++A AL
Sbjct: 541 LHQRVIGQDEAVTAVADAVLRSRAGLADPNRPIGS-------FLFLGPTGVGKTELARAL 593
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +++ +D+S Q + + G + + R PYS
Sbjct: 594 AEALFGSEDRMVRLDMSEYQERHTVSRLVGAP------PGYVGHDEAGQLTEAVRRHPYS 647
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+V L++++K A P V ++L + + G+ TD+ GR V + V TS +
Sbjct: 648 LVLLDEVEK-AHPDVFNTLLQVLDDGRLTDAQGRTVDFKNTVVVMTSNL 695
>gi|333906007|ref|YP_004479878.1| stress response-related Clp ATPase [Streptococcus parauberis KCTC
11537]
gi|333121272|gb|AEF26206.1| stress response-related Clp ATPase [Streptococcus parauberis KCTC
11537]
Length = 814
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQEDAVSAISRAIRRNQSGIRTGRRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGMLTDSRGRRVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|21672930|ref|NP_660995.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Chlorobium
tepidum TLS]
gi|54035862|sp|Q8KG79.1|CLPB1_CHLTE RecName: Full=Probable chaperone protein ClpB 1
gi|21645986|gb|AAM71337.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Chlorobium
tepidum TLS]
Length = 438
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +S AV R R G G R +GS FLGP VGK ++A L
Sbjct: 139 LHRRVVGQDEAVRAVSDAVKRSRAGMGDEKRPIGS-------FIFLGPTGVGKTELARTL 191
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +F ++ LI +D+S + + + + G+ + + R KP+S
Sbjct: 192 AEYLFDDEDALIRIDMSEYMEAHTVSRLVGAPP-GYVGYEEGGQ-----LTEAVRRKPFS 245
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V+ I + TS I
Sbjct: 246 VVLLDEIEK-AHPDVFNILLQILDDGRLTDSKGRTVNFKNTIIIMTSNI 293
>gi|295108565|emb|CBL22518.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
obeum A2-162]
Length = 832
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 23/172 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ ++QAV R R+G R +GS FLGP VGK +++ AL
Sbjct: 514 LHKRVIGQDEAVKAVAQAVKRGRVGLKDPHRPIGS-------FLFLGPTGVGKTELSKAL 566
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE VFG++ +I VD+S + ++ G V D + ++ R
Sbjct: 567 AEAVFGSEQAMIRVDMS---------EYMEKHSVSKLIGSPPGYVGYDEGGQLSEKVRRN 617
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSV+ ++++K A P V + L + + G TD++GR V I + TS +
Sbjct: 618 PYSVLLFDEIEK-AHPDVFNILLQVLDDGHITDAHGRKVDFKQTIIIMTSNV 668
>gi|251772527|gb|EES53093.1| putative ATP-dependent Clp protease, ATPase subunit [Leptospirillum
ferrodiazotrophum]
Length = 813
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEAI +++A+ R R G R +GS FLGP VGK ++A LAE+
Sbjct: 509 RVVGQDEAISAVARAIRRSRAGIKGEKRPIGS-------FIFLGPTGVGKTELARTLAEV 561
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FGN+ LI VD +S+ F+ + G + ++ R +PYSV+
Sbjct: 562 MFGNEDALIRVD------MSEYMERFNVSRLTGAPPGYVGYEEGGQLTEKVRRRPYSVIL 615
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P + + L + + G TDS GR + + + TS +
Sbjct: 616 FDEIEK-AHPDMFNVLLQVLDDGFITDSLGRKIDFKNTVLIMTSNL 660
>gi|162456206|ref|YP_001618573.1| ABC transporter ATPase [Sorangium cellulosum So ce56]
gi|161166788|emb|CAN98093.1| ATPase with chaperone activity, two ATP-binding domains [Sorangium
cellulosum So ce56]
Length = 871
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
LA++V QDEA+ I++AV R R+G G+ +GS FLGP VGK ++A AL
Sbjct: 574 LAQRVVGQDEAVRAIAKAVRRGRVGLRDPGKPIGS-------FLFLGPSGVGKTELAKAL 626
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +F ++ L +D+S + + D + G ++ + R +PYS
Sbjct: 627 AEFLFDDEQALTRMDMSEFMERHMAQRLIGAPP-GYADSEQGG-----FLTEAARRRPYS 680
Query: 807 VVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ ++++KA AD V + L + + G+ TD GR S + + TS I
Sbjct: 681 VLLFDEVEKAHAD--VFNLLLQILDDGRLTDGRGRLADFSNTVVIMTSNI 728
>gi|297530841|ref|YP_003672116.1| ATPase AAA [Geobacillus sp. C56-T3]
gi|297254093|gb|ADI27539.1| ATPase AAA-2 domain protein [Geobacillus sp. C56-T3]
Length = 712
Score = 76.6 bits (187), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA+KV Q EA+ +++A+ R R G R +GS F+GP VGK
Sbjct: 414 KHLEENLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPIGS-------FLFVGPTGVGKT 466
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQ 798
++A LAE +FG K +I +D+S + + + F + + +
Sbjct: 467 ELAKTLAEELFGTKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEA--------GQLTE 518
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ R PYS++ L++++K A P VQ + + G+ TDS GR VS + +ATS
Sbjct: 519 KVRRNPYSIILLDEIEK-AHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATS 572
>gi|332522720|ref|ZP_08398972.1| negative regulator of genetic competence ClpC/MecB [Streptococcus
porcinus str. Jelinkova 176]
gi|332313984|gb|EGJ26969.1| negative regulator of genetic competence ClpC/MecB [Streptococcus
porcinus str. Jelinkova 176]
Length = 813
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEAI IS+A+ R + G R +GS FLGP
Sbjct: 502 DSQKYLRLEEELHKRVIGQDEAISAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 554
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 555 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFSASRLNGAPPGYV 601
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R++PYSV+ ++++K A P + + L + + G TDS GR V + I
Sbjct: 602 GYDEGGELTEKVRNRPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFTNTI 660
Query: 849 FVATSTI 855
+ TS +
Sbjct: 661 IIMTSNL 667
>gi|322386185|ref|ZP_08059818.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
cristatus ATCC 51100]
gi|417921295|ref|ZP_12564787.1| Clp amino terminal domain protein [Streptococcus cristatus ATCC
51100]
gi|321269765|gb|EFX52692.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Streptococcus
cristatus ATCC 51100]
gi|342834455|gb|EGU68724.1| Clp amino terminal domain protein [Streptococcus cristatus ATCC
51100]
Length = 809
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD A+ +S+A+ R + G R +GS FLGP
Sbjct: 498 DAKKYLNLEKELHKRVIGQDAAVSAVSRAIRRNQSGIRTGKRPIGS-------FMFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 551 GVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 597
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R++PYSV+ ++++KA I + L + + G+ TDS GR V S I
Sbjct: 598 GYEEGGELTEKVRNRPYSVLLFDEVEKAHSDIF-NVLLQVLDDGQLTDSKGRKVDFSNTI 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 IIMTSNL 663
>gi|319766006|ref|YP_004131507.1| ATPase AAA [Geobacillus sp. Y412MC52]
gi|317110872|gb|ADU93364.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC52]
Length = 712
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA+KV Q EA+ +++A+ R R G R +GS F+GP VGK
Sbjct: 414 KHLEENLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPIGS-------FLFVGPTGVGKT 466
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQ 798
++A LAE +FG K +I +D+S + + + F + + +
Sbjct: 467 ELAKTLAEELFGTKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEA--------GQLTE 518
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ R PYS++ L++++K A P VQ + + G+ TDS GR VS + +ATS
Sbjct: 519 KVRRNPYSIILLDEIEK-AHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATS 572
>gi|326780910|ref|ZP_08240175.1| ATPase AAA-2 domain protein [Streptomyces griseus XylebKG-1]
gi|326661243|gb|EGE46089.1| ATPase AAA-2 domain protein [Streptomyces griseus XylebKG-1]
Length = 846
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 25/176 (14%)
Query: 693 KVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
++ QDEA+ +S+AV R R G G R VGS FLGP VGK ++A LAE+
Sbjct: 537 RIVGQDEAVTAVSEAVRRNRAGMGDPNRPVGS-------FLFLGPTGVGKTELAKTLAEL 589
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
+FG +++ D+S Q + G V D + ++ R PYS
Sbjct: 590 LFGADDRMVRFDMSEFQEKHTVARLVGAPP---------GYVGYDEAGQLTEKVRRNPYS 640
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
VV ++++K A P V ++L + + G+ TD GR V + + TS I G H +
Sbjct: 641 VVLFDEVEK-AHPDVFNTLLQILDDGRLTDGQGRTVDFRHCVVIMTSNI--GAHRI 693
>gi|138894526|ref|YP_001124979.1| ATP-dependent Clp protease-like protein [Geobacillus
thermodenitrificans NG80-2]
gi|196247869|ref|ZP_03146571.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
gi|134266039|gb|ABO66234.1| ATP-dependent Clp protease-like (class III stress gene)
[Geobacillus thermodenitrificans NG80-2]
gi|196212653|gb|EDY07410.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
Length = 711
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 17/174 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA+KV Q EA+ +++A+ R R G R VGS F+GP VGK
Sbjct: 413 KHLEDNLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPVGS-------FLFVGPTGVGKT 465
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++A LAE +FG K +I +D+S + + + + G+ + ++
Sbjct: 466 ELAKTLAEELFGTKDSMIRLDMSEYMEKHSVSKLIGSPP-GYVGFEEAGQ-----LTEKV 519
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
R PYS++ L++++K A P VQ + + G+ TDS GR VS + +ATS
Sbjct: 520 RRNPYSIILLDEIEK-AHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATSN 572
>gi|261419190|ref|YP_003252872.1| ATPase AAA [Geobacillus sp. Y412MC61]
gi|261375647|gb|ACX78390.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC61]
Length = 712
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA+KV Q EA+ +++A+ R R G R +GS F+GP VGK
Sbjct: 414 KHLEENLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPIGS-------FLFVGPTGVGKT 466
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQ 798
++A LAE +FG K +I +D+S + + + F + + +
Sbjct: 467 ELAKTLAEELFGTKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEA--------GQLTE 518
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ R PYS++ L++++K A P VQ + + G+ TDS GR VS + +ATS
Sbjct: 519 KVRRNPYSIILLDEIEK-AHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATS 572
>gi|296140886|ref|YP_003648129.1| ATPase AAA [Tsukamurella paurometabola DSM 20162]
gi|296029020|gb|ADG79790.1| ATPase AAA-2 domain protein [Tsukamurella paurometabola DSM 20162]
Length = 853
Score = 76.6 bits (187), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 19/177 (10%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVG 738
K LR+ L +V QDEA+ +S+AV R R G R +GS FLGP VG
Sbjct: 524 KLLRLEDDLHARVVGQDEAVIAVSEAVRRARAGLKDPSRPIGS-------FLFLGPTGVG 576
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K ++A ALA VFG++ +LI D+S Q + + + + G+ L D +
Sbjct: 577 KTELAKALAATVFGDEDRLIRFDMSEFQEKHTVSRLVGAPP-GYVGYEEAGQ-LTDKV-- 632
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R +PYSV+ ++++KA P V + L + + G+ TD+ GR V I + TS I
Sbjct: 633 --RRQPYSVILFDEIEKAH-PDVFNILLQLLDDGRVTDAQGRTVDFKNTIVILTSNI 686
>gi|312864373|ref|ZP_07724606.1| negative regulator of genetic competence ClpC/MecB [Streptococcus
downei F0415]
gi|311100094|gb|EFQ58305.1| negative regulator of genetic competence ClpC/MecB [Streptococcus
downei F0415]
Length = 815
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QD+A+ +S+A+ R + G R +GS FLGP
Sbjct: 503 DNQRYLNLEKELHKRVIGQDDAVSAVSRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAELLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|222628845|gb|EEE60977.1| hypothetical protein OsJ_14761 [Oryza sativa Japonica Group]
Length = 636
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR +Q L+ E+A V+ AV +AR+R ++Q T LHV SA+L P LLR AC R
Sbjct: 1 MRAGGCTVQQALTAEAAAVVKQAVTLARRRGNAQVTPLHVASAMLAPPGGLLRAACLRSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEFPPI 95
S+ LQ +ALELC VA +RLP+S +V P+
Sbjct: 61 SH----PLQCKALELCFNVALNRLPASAAVASSPL 91
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 27/190 (14%)
Query: 678 FDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG----NGRDVGSNSKRGIWLAFLG 733
+ + K L AL ++V WQ E + ++ AV + R G R + +K WL FLG
Sbjct: 371 LNAENLKLLCAALEKEVPWQKEIVPEVASAVLQCRSGIAKRRDRSRSTEAKEETWLFFLG 430
Query: 734 PDKVGKKKIASALAEIVFGNKGKLIHVDVSS-------------EQRVSQPNSIFDCQNI 780
D GK+++A LA +VFG++ + V + + R +P +
Sbjct: 431 GDGHGKERVARELAGLVFGSRKSFLSVKLGASSSSPSASGSTEDHHRSKRPRTTTTSSA- 489
Query: 781 DFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGR 840
+ ++ +Y P+ V+ +ED+++ D Q + +AI G G
Sbjct: 490 --------SEAYLERLYDAVSENPHRVILIEDVEQ-GDHRWQVGVKEAIDRGVLRSQAGD 540
Query: 841 DVSISGMIFV 850
+V + I +
Sbjct: 541 EVGVGDAIII 550
>gi|254425327|ref|ZP_05039045.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
gi|196192816|gb|EDX87780.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
Length = 822
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 88/171 (51%), Gaps = 13/171 (7%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG-NGRDVGSNSKRGIWLAFLGPDKVGKKKIAS 744
L L E+V QDEA+ +S+AV R R+G G D S L F GP VGK ++A
Sbjct: 504 LEQTLHERVVGQDEAVEAVSRAVRRARVGLRGLDRPIAS-----LVFSGPTGVGKTELAK 558
Query: 745 ALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKP 804
ALA VFG++ +I +D+ SE S S F G+ + + R +P
Sbjct: 559 ALASAVFGSEEAMIRLDM-SEFMESHTVSKLIGSPPGFVGYDEGGQ-----LTEAVRRRP 612
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
YSV+ +++++K A P V + L + + G +DS GR+VS + + TS I
Sbjct: 613 YSVILMDEIEK-AHPDVFNILLQVLDDGHLSDSKGREVSFKNTLIIMTSNI 662
>gi|315605228|ref|ZP_07880274.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 180 str. F0310]
gi|315313045|gb|EFU61116.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 180 str. F0310]
Length = 826
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 29/226 (12%)
Query: 639 NKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPF----DPRDYKTLRIA--LAE 692
+KE+ + G S E V + V+ S TG P K L++ L +
Sbjct: 470 SKEEAWKGGESDEIAEVGDQEIAEVLAMS------TGIPVVRLTQTETAKLLKMEDELHK 523
Query: 693 KVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFG 752
+V QDEA+ ++Q++ R R G + ++ G F GP VGK ++A ALAE +FG
Sbjct: 524 RVIGQDEAVKALAQSIRRTRSG----LKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFG 579
Query: 753 NKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVF 809
++ LI +D+S + +F G V D + ++ R KP+SVV
Sbjct: 580 DEDALIQLDMSEFSEKHTASRLFGAPP---------GYVGYDEGGQLTEKVRRKPFSVVL 630
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P + +SL + + G+ TDS GR V + + T+ +
Sbjct: 631 FDEVEK-AHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNL 675
>gi|269218173|ref|ZP_06162027.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 848 str. F0332]
gi|269212301|gb|EEZ78641.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 848 str. F0332]
Length = 861
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 19/177 (10%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKK 741
K LR+ L ++V Q+EA+ +SQA+ R R G + ++ G F GP VGK +
Sbjct: 503 KLLRMEEELHKRVIGQNEAVVALSQAIRRTRAG----LKDPNRPGGSFIFAGPTGVGKTE 558
Query: 742 IASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQ 798
+A ALAE +FG++ LI +D+S + +F G V D + +
Sbjct: 559 LAKALAEFLFGDESALITLDMSEYSEKHAVSRLFGAPP---------GYVGYDEGGQLTE 609
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ R KP+SVV ++++K A P + +SL + + G+ TDS GR V I + T+ +
Sbjct: 610 KVRRKPFSVVLFDEVEK-AHPDLFNSLLQILEEGRLTDSQGRVVDFKNTIIIMTTNL 665
>gi|403235214|ref|ZP_10913800.1| ATPase AAA [Bacillus sp. 10403023]
Length = 711
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
+ + K L LA+KV Q+EA+ +++AV R R G R +GS F+GP
Sbjct: 408 EQQKMKHLAENLAKKVIGQEEAVTKVAKAVRRSRAGLKAKTRPIGS-------FLFVGPT 460
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDY 795
VGK ++ LAE +FG+K +I +D+S + I G
Sbjct: 461 GVGKTELTKTLAEELFGSKDAMIRLDMSEYMEKHSVSKIIG------SPPGYVGHEEAGQ 514
Query: 796 IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
+ ++ R PYS++ L++++K A P VQ + + G+ TDS GR VS + + TS
Sbjct: 515 LTEKVRRNPYSIILLDEIEK-AHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTSN 572
>gi|375007935|ref|YP_004981568.1| negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359286784|gb|AEV18468.1| Negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 710
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA+KV Q EA+ +++A+ R R G R +GS F+GP VGK
Sbjct: 413 KHLEENLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPIGS-------FLFVGPTGVGKT 465
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQ 798
++A LAE +FG K +I +D+S + + + F + + +
Sbjct: 466 ELAKTLAEELFGTKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEA--------GQLTE 517
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ R PYS++ L++++K A P VQ + + G+ TDS GR VS + +ATS
Sbjct: 518 KVRRNPYSIILLDEIEK-AHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATS 571
>gi|148655866|ref|YP_001276071.1| ATPase [Roseiflexus sp. RS-1]
gi|148567976|gb|ABQ90121.1| ATPase AAA-2 domain protein [Roseiflexus sp. RS-1]
Length = 845
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L +V Q EAI TIS++V R R G + KR I FLGP VGK ++A ALAE
Sbjct: 522 LHSRVIGQHEAIVTISKSVRRARAGL-----KDPKRPIGSFIFLGPTGVGKTELAKALAE 576
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
+FG++ LI +D+S Q + + + + + G L D + R KPYS
Sbjct: 577 FMFGSEEHLIKIDMSEFQERHTTSRLVGSPPGYVGYGE----GGQLTDAV----RRKPYS 628
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P + L + + G TD GR V I + TS +
Sbjct: 629 VVLFDEIEK-AHPDAFNLLLQVLEDGHLTDGKGRRVDFRNTIIIMTSNV 676
>gi|374320677|ref|YP_005073806.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
terrae HPL-003]
gi|357199686|gb|AET57583.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
terrae HPL-003]
Length = 814
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A ALAE
Sbjct: 509 RVIGQDEAVKAVSRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARALAES 561
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG++ +I +D+ SE S + + G+ + ++ R KPYSVV
Sbjct: 562 MFGDENAVIRIDM-SEYMEKHSTSRLVGAPPGYVGYEEGGQ-----LTEKVRRKPYSVVL 615
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 616 LDEIEK-AHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNV 660
>gi|386580851|ref|YP_006077256.1| ATPase [Streptococcus suis JS14]
gi|319759043|gb|ADV70985.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis JS14]
Length = 817
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q+EAI +S+A+ R + G R +GS FLGP
Sbjct: 503 DAKKYLNLEQELHKRVIGQEEAISAVSRAIRRNQSGIRTGHRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAEI+F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEILFDDESALIRFDMSEYME-------------KFATSRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TD GR V S +
Sbjct: 603 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDRKGRKVDFSNTV 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|182440247|ref|YP_001827966.1| chaperone [Streptomyces griseus subsp. griseus NBRC 13350]
gi|178468763|dbj|BAG23283.1| putative chaperone [Streptomyces griseus subsp. griseus NBRC 13350]
Length = 846
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 25/176 (14%)
Query: 693 KVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
++ QDEA+ +S+AV R R G G R VGS FLGP VGK ++A LAE+
Sbjct: 537 RIVGQDEAVTAVSEAVRRNRAGMGDPNRPVGS-------FLFLGPTGVGKTELAKTLAEL 589
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
+FG +++ D+S Q + G V D + ++ R PYS
Sbjct: 590 LFGADDRMVRFDMSEFQEKHTVARLVGAPP---------GYVGYDEAGQLTEKVRRNPYS 640
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
VV ++++K A P V ++L + + G+ TD GR V + + TS I G H +
Sbjct: 641 VVLFDEVEK-AHPDVFNTLLQILDDGRLTDGQGRTVDFRHCVVIMTSNI--GAHRI 693
>gi|392948364|ref|ZP_10313974.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Lactobacillus
pentosus KCA1]
gi|392436346|gb|EIW14260.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Lactobacillus
pentosus KCA1]
Length = 740
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 91/185 (49%), Gaps = 31/185 (16%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
KTL L V QD+A+ +++A+ R RIG GR +GS F+GP VGK
Sbjct: 439 KTLAPDLKSNVIGQDQAVDAVARAIRRNRIGLNGTGRPIGS-------FMFVGPTGVGKT 491
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY--- 795
++A LA+ +FG++ +I D+S +P+S+ KL G V Y
Sbjct: 492 ELAKQLAKELFGSEDAMIRFDMSE---YMEPHSV----------AKLIGSPPGYVGYEEA 538
Query: 796 --IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ ++ R PYS+V L++++K A P V + + G+ TDS GR VS I + TS
Sbjct: 539 GQLTEQVRRHPYSLVLLDEVEK-AHPDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTS 597
Query: 854 TILKG 858
G
Sbjct: 598 NAGTG 602
>gi|42518421|ref|NP_964351.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Lactobacillus johnsonii NCC 533]
gi|41582706|gb|AAS08317.1| ATP-dependent clp protease ATP-binding subunit clpA-like protein
[Lactobacillus johnsonii NCC 533]
Length = 822
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 90/188 (47%), Gaps = 33/188 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEAI +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 514 LHERVIGQDEAISAVSRAIRRSRSGIKDENRPIGS-------FLFLGPTGVGKTELAKAL 566
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQE 799
A VFG++ +I VD+S + + Q KL G V Y + +
Sbjct: 567 AAAVFGSERNIIRVDMS--EYMDQ-----------IATSKLIGSAPGYVGYEEGGQLSER 613
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
R PYSV+ L++++K A P V + L + + G TDS GR V I + TS + G
Sbjct: 614 VRRNPYSVILLDEVEK-AHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL--GS 670
Query: 860 HSVHPQTT 867
S+ T
Sbjct: 671 RSLQEDKT 678
>gi|239916715|ref|YP_002956273.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|281414827|ref|ZP_06246569.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|239837922|gb|ACS29719.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
Length = 851
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 17/220 (7%)
Query: 639 NKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAP---HTGEPFDPRDYKTLRIALAEKVG 695
KEQ + A+ V E V+ S S P T E D +T+ L +V
Sbjct: 467 EKEQAWRTGADADVATVDEDLIAEVL-SKSTGIPVFKLTAEETDR--LRTMEDELHRRVI 523
Query: 696 WQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKG 755
QDEAI ++S+A+ R R G +D N G ++ F GP VGK ++A +LAE +FG++
Sbjct: 524 GQDEAIKSLSRAIRRTRAGL-KD--PNRPSGSFI-FAGPTGVGKTELAKSLAEFLFGDED 579
Query: 756 KLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDK 815
LI +D+S Q + +F + + G+ + ++ R +P+SVV ++++K
Sbjct: 580 ALITLDMSEFQEKHTVSRLFGAPP-GYVGYEEGGQ-----LTEKVRRRPFSVVLFDEVEK 633
Query: 816 AADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
A + +SL + + G+ TDS GR V + + T+ +
Sbjct: 634 AHQDLF-NSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 672
>gi|419706826|ref|ZP_14234335.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
salivarius PS4]
gi|383283461|gb|EIC81416.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus
salivarius PS4]
Length = 816
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V QDEA+ IS+A+ R + G R +GS FLGP
Sbjct: 505 DSKRYLNLESELHKRVIGQDEAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 557
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A LAE++F ++ L+ D+S F +L G V
Sbjct: 558 GVGKTELAKTLAEVLFDDESALLRFDMSEYME-------------KFAASRLNGAPPGYV 604
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 605 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTDSRGRKVDFSNTI 663
Query: 849 FVATSTI 855
+ TS +
Sbjct: 664 IIMTSNL 670
>gi|333396625|ref|ZP_08478442.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
Length = 829
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 17/173 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L ++V Q+EA+ +S+A+ R R G R +GS FLGP VGK ++
Sbjct: 513 LEKVLHKRVIGQEEAVSAVSRAIRRARSGLKDPQRPIGS-------FMFLGPTGVGKTEL 565
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A ALAE +FG++ +I VD+S + + + + G+ + ++ R
Sbjct: 566 AKALAEAMFGSEDNMIRVDMSEYMEKYSTSRLVGAPP-GYVGYEEGGQ-----LTEKVRQ 619
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYSVV L++++K A P V + L + + G TDS GR V I + TS +
Sbjct: 620 KPYSVVLLDEVEK-AHPDVFNILLQVLDDGYLTDSKGRRVDFRNTILIMTSNL 671
>gi|289548462|ref|YP_003473450.1| ATPase AAA [Thermocrinis albus DSM 14484]
gi|289182079|gb|ADC89323.1| ATPase AAA-2 domain protein [Thermocrinis albus DSM 14484]
Length = 814
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 11/166 (6%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V QDEAI +++A+ R R+G G + G++L FLGP VGK + A ALAE
Sbjct: 499 LKKRVVGQDEAIKAVARAIRRSRVGLK---GRHRPIGVFL-FLGPTGVGKTETAKALAEY 554
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG + LI D+S + + + + G+ + ++ R +PYSV+
Sbjct: 555 LFGTEDALIRFDMSEYMEKHTVSRLVGAPP-GYVGYEEGGQ-----LTEKVRRRPYSVLL 608
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P V + + G+ TD+ GR V S I + TS +
Sbjct: 609 FDEIEK-AHPDVFNIFLQIFDDGRLTDAMGRTVDFSNTIIIMTSNL 653
>gi|193213633|ref|YP_001999586.1| AAA ATPase-2 domain-containing protein [Chlorobaculum parvum NCIB
8327]
gi|193087110|gb|ACF12386.1| ATPase AAA-2 domain protein [Chlorobaculum parvum NCIB 8327]
Length = 438
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ +S AV R R G G R +GS FLGP VGK ++A L
Sbjct: 139 LHRRVVGQDEAVRAVSDAVKRSRAGMGDEKRPIGS-------FIFLGPTGVGKTELARTL 191
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +F ++ LI +D+S + + + + G+ + + R KP+S
Sbjct: 192 AEYLFDDEDALIRIDMSEYMEAHTVSRLVGAPP-GYVGYEEGGQ-----LTEAVRRKPFS 245
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V+ I + TS I
Sbjct: 246 VVLLDEIEK-AHPDVFNILLQILDDGRLTDSKGRTVNFKNTIIIMTSNI 293
>gi|396583892|ref|ZP_10484401.1| Clp amino terminal domain protein [Actinomyces sp. ICM47]
gi|395548567|gb|EJG15807.1| Clp amino terminal domain protein [Actinomyces sp. ICM47]
Length = 822
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 110/236 (46%), Gaps = 29/236 (12%)
Query: 629 QEANTPKLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPF----DPRDYK 684
QE+ + KE+ + G S E V + V+ S TG P K
Sbjct: 456 QESKLSEERKAKEEAWKGGESDEIAEVGDQEIAEVLAMS------TGIPVVRLTQTETAK 509
Query: 685 TLRIA--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L++ L ++V QDEA+ ++Q++ R R G + ++ G F GP VGK ++
Sbjct: 510 LLKMEDELHKRVIGQDEAVKALAQSIRRTRSG----LKDPNRPGGSFIFAGPTGVGKTEL 565
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQE 799
A ALAE +FG++ LI +D+S + +F G V D + ++
Sbjct: 566 AKALAEFLFGDEDALIQLDMSEFSEKHTASRLFGAPP---------GYVGYDEGGQLTEK 616
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KP+SVV ++++K A P + +SL + + G+ TDS GR V + + T+ +
Sbjct: 617 VRRKPFSVVLFDEVEK-AHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNL 671
>gi|336392462|ref|ZP_08573861.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 830
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 17/173 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L ++V Q+EA+ +S+A+ R R G R +GS FLGP VGK ++
Sbjct: 514 LEKVLHKRVIGQEEAVSAVSRAIRRARSGLKDPQRPIGS-------FMFLGPTGVGKTEL 566
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A ALAE +FG++ +I VD+S + + + + G+ + ++ R
Sbjct: 567 AKALAEAMFGSEDNMIRVDMSEYMEKYSTSRLVGAPP-GYVGYEEGGQ-----LTEKVRQ 620
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYSVV L++++K A P V + L + + G TDS GR V I + TS +
Sbjct: 621 KPYSVVLLDEVEK-AHPDVFNILLQVLDDGYLTDSKGRRVDFRNTILIMTSNL 672
>gi|254556241|ref|YP_003062658.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus
plantarum JDM1]
gi|308180216|ref|YP_003924344.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|418274792|ref|ZP_12890290.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448820816|ref|YP_007413978.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus
plantarum ZJ316]
gi|254045168|gb|ACT61961.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus
plantarum JDM1]
gi|308045707|gb|ADN98250.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|376010358|gb|EHS83684.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448274313|gb|AGE38832.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus
plantarum ZJ316]
Length = 739
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 91/185 (49%), Gaps = 31/185 (16%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
KTL L V QD+A+ +++A+ R RIG GR +GS F+GP VGK
Sbjct: 438 KTLAPDLKSTVIGQDQAVEAVARAIRRNRIGLNGTGRPIGS-------FMFVGPTGVGKT 490
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY--- 795
++A LA+ +FG++ +I D+S +P+S+ KL G V Y
Sbjct: 491 ELAKQLAKELFGSQDAMIRFDMSE---YMEPHSV----------AKLIGSPPGYVGYEEA 537
Query: 796 --IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ ++ R PYS+V L++++K A P V + + G+ TDS GR VS I + TS
Sbjct: 538 GQLTEQVRRHPYSLVLLDEVEK-AHPDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTS 596
Query: 854 TILKG 858
G
Sbjct: 597 NAGTG 601
>gi|375099628|ref|ZP_09745891.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora cyanea NA-134]
gi|374660360|gb|EHR60238.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora cyanea NA-134]
Length = 843
Score = 76.3 bits (186), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ ++++V R R G GR GS FLGP VGK ++A ALAE
Sbjct: 539 RVVGQDEAVAAVAESVRRARAGLAEPGRPSGS-------FLFLGPTGVGKTELARALAEA 591
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG++ +I +D+S + + G + + R +PYSVV
Sbjct: 592 LFGSEESMIRLDMS------EYGERHTVSRLVGAPPGYVGYEEAGQLTEAVRRRPYSVVL 645
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++KA + + L + + G+ TD GR V+ + + + TS I
Sbjct: 646 LDEIEKAHQDVF-NMLLQVLEDGRLTDGRGRTVNFTNTVLIMTSNI 690
>gi|268318843|ref|YP_003292499.1| ATP-dependent Clp protease [Lactobacillus johnsonii FI9785]
gi|262397218|emb|CAX66232.1| ATP-dependent Clp protease [Lactobacillus johnsonii FI9785]
Length = 818
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 90/188 (47%), Gaps = 33/188 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEAI +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 514 LHERVIGQDEAISAVSRAIRRSRSGIKDENRPIGS-------FLFLGPTGVGKTELAKAL 566
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQE 799
A VFG++ +I VD+S + + Q KL G V Y + +
Sbjct: 567 AAAVFGSERNIIRVDMS--EYMDQ-----------IATSKLIGSAPGYVGYEEGGQLSER 613
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
R PYSV+ L++++K A P V + L + + G TDS GR V I + TS + G
Sbjct: 614 VRRNPYSVILLDEVEK-AHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL--GS 670
Query: 860 HSVHPQTT 867
S+ T
Sbjct: 671 RSLQEDKT 678
>gi|450110702|ref|ZP_21862276.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans SM6]
gi|449224702|gb|EMC24328.1| class III stress response-related ATP-dependent Clp protease,
ATP-binding subunit [Streptococcus mutans SM6]
Length = 813
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 33/188 (17%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSR----WRIGNGRDVGSNSKRGIWLAFLGP 734
D + Y L L ++V QD+A+ +IS+A+ R R+G R +GS FLGP
Sbjct: 502 DSKKYLNLERELHKRVIGQDDAVSSISRAIRRNQSGIRVGK-RPIGS-------FMFLGP 553
Query: 735 DKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VL 792
VGK ++A ALAE++F ++ LI D+S F +L G
Sbjct: 554 TGVGKTELAKALAEVLFDDESALIRFDMSEYME-------------KFAASRLNGAPPGY 600
Query: 793 VDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V Y + ++ R+KPYSV+ ++++K A P + + L + + G T S GR V S
Sbjct: 601 VGYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGVLTGSRGRKVDFSNT 659
Query: 848 IFVATSTI 855
I + TS +
Sbjct: 660 IIIMTSNL 667
>gi|227888861|ref|ZP_04006666.1| ATP-binding Clp protease subunit [Lactobacillus johnsonii ATCC
33200]
gi|227850698|gb|EEJ60784.1| ATP-binding Clp protease subunit [Lactobacillus johnsonii ATCC
33200]
Length = 828
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 90/188 (47%), Gaps = 33/188 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEAI +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 524 LHERVIGQDEAISAVSRAIRRSRSGIKDENRPIGS-------FLFLGPTGVGKTELAKAL 576
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQE 799
A VFG++ +I VD+S + + Q KL G V Y + +
Sbjct: 577 AAAVFGSERNIIRVDMS--EYMDQ-----------IATSKLIGSAPGYVGYEEGGQLSER 623
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
R PYSV+ L++++K A P V + L + + G TDS GR V I + TS + G
Sbjct: 624 VRRNPYSVILLDEVEK-AHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL--GS 680
Query: 860 HSVHPQTT 867
S+ T
Sbjct: 681 RSLQEDKT 688
>gi|399526611|ref|ZP_10766373.1| Clp amino terminal domain protein [Actinomyces sp. ICM39]
gi|398362852|gb|EJN46519.1| Clp amino terminal domain protein [Actinomyces sp. ICM39]
Length = 822
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 29/225 (12%)
Query: 640 KEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPF----DPRDYKTLRIA--LAEK 693
KE+ + G S E V + V+ S TG P K L++ L ++
Sbjct: 467 KEEAWKGGESDEIAEVGDQEIAEVLAMS------TGIPVVRLTQTETAKLLKMEDELHKR 520
Query: 694 VGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGN 753
V QDEA+ ++Q++ R R G + ++ G F GP VGK ++A ALAE +FG+
Sbjct: 521 VIGQDEAVKALAQSIRRTRSG----LKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGD 576
Query: 754 KGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFL 810
+ LI +D+S + +F G V D + ++ R KP+SVV
Sbjct: 577 EDALIQLDMSEFSEKHTASRLFGAPP---------GYVGYDEGGQLTEKVRRKPFSVVLF 627
Query: 811 EDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P + +SL + + G+ TDS GR V + + T+ +
Sbjct: 628 DEVEK-AHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNL 671
>gi|293191197|ref|ZP_06609130.1| negative regulator of genetic competence ClpC/MecB [Actinomyces
odontolyticus F0309]
gi|292820618|gb|EFF79587.1| negative regulator of genetic competence ClpC/MecB [Actinomyces
odontolyticus F0309]
Length = 826
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 29/225 (12%)
Query: 640 KEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPF----DPRDYKTLRIA--LAEK 693
KE+ + G S E V + V+ S TG P K L++ L ++
Sbjct: 471 KEEAWKGGESDEIAEVGDQEIAEVLAMS------TGIPVVRLTQTETAKLLKMEDELHKR 524
Query: 694 VGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGN 753
V QDEA+ ++Q++ R R G + ++ G F GP VGK ++A ALAE +FG+
Sbjct: 525 VIGQDEAVKALAQSIRRTRSG----LKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGD 580
Query: 754 KGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFL 810
+ LI +D+S + +F G V D + ++ R KP+SVV
Sbjct: 581 EDALIQLDMSEFSEKHTASRLFGAPP---------GYVGYDEGGQLTEKVRRKPFSVVLF 631
Query: 811 EDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P + +SL + + G+ TDS GR V + + T+ +
Sbjct: 632 DEVEK-AHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNL 675
>gi|256848479|ref|ZP_05553921.1| ATP-dependent chaperone ClpB [Lactobacillus coleohominis 101-4-CHN]
gi|256714746|gb|EEU29725.1| ATP-dependent chaperone ClpB [Lactobacillus coleohominis 101-4-CHN]
Length = 731
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 127/297 (42%), Gaps = 43/297 (14%)
Query: 589 HLLPPHPLADLYKPHEHTSFSFLASVTTDLGLGKIYPSTRQEANTPKLIDNKEQCFSGSI 648
HL HP+ D+ + D + Y + QEA K+ D K+Q S
Sbjct: 320 HLAAKHPVKDVKE--IEKEIEKEEKKQKDAAKKEDYKAA-QEAKD-KIADLKKQIKDHSK 375
Query: 649 SAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAV 708
E A E V Q + G D + K + L KV QDEA+ +++A+
Sbjct: 376 QEEVTATPEDVAAAVEQMTGIPVSKIGAS-DVQRLKEMDKRLEGKVIGQDEAVEAVARAI 434
Query: 709 SRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSE 765
R R G R +GS F+GP VGK ++A LA +FG+K +I +D+S
Sbjct: 435 RRNRAGFDEGNRPIGS-------FLFVGPTGVGKTELAKQLALDMFGSKNDIIRLDMSE- 486
Query: 766 QRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY------IYQEFRSKPYSVVFLEDLDKAA 817
S N++ KL G V Y + ++ R PYS++ L++++K A
Sbjct: 487 --YSDRNAV----------SKLIGTTAGYVGYDDNSNTLTEKVRRHPYSIILLDEIEK-A 533
Query: 818 DPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEE 874
+P V + L + + G+ TD G V + +ATS ++ + PVK +E
Sbjct: 534 NPQVITLLLQVLDDGRLTDGQGNTVDFKNTVIIATS------NAGYSNDAPVKLGDE 584
>gi|334882861|emb|CCB83948.1| ATP-dependent Clp protease, ATP-binding subunit ClpL [Lactobacillus
pentosus MP-10]
gi|339637120|emb|CCC15998.1| ATP-dependent Clp protease, ATP-binding subunit ClpL [Lactobacillus
pentosus IG1]
Length = 689
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 91/185 (49%), Gaps = 31/185 (16%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
KTL L V QD+A+ +++A+ R RIG GR +GS F+GP VGK
Sbjct: 388 KTLAPDLKSNVIGQDQAVDAVARAIRRNRIGLNGTGRPIGS-------FMFVGPTGVGKT 440
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY--- 795
++A LA+ +FG++ +I D+S +P+S+ KL G V Y
Sbjct: 441 ELAKQLAKELFGSEDAMIRFDMSE---YMEPHSV----------AKLIGSPPGYVGYEEA 487
Query: 796 --IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ ++ R PYS+V L++++K A P V + + G+ TDS GR VS I + TS
Sbjct: 488 GQLTEQVRRHPYSLVLLDEVEK-AHPDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTS 546
Query: 854 TILKG 858
G
Sbjct: 547 NAGTG 551
>gi|376259729|ref|YP_005146449.1| chaperone ATPase [Clostridium sp. BNL1100]
gi|373943723|gb|AEY64644.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
sp. BNL1100]
Length = 810
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 653 DAVSEGTFHNVVQS-SSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRW 711
D V+E ++V S + E R K + L ++V QDEA+ +IS+A+ R
Sbjct: 471 DTVTEDEIADIVASWTGIPVKRLAEEESERLLK-MEETLHKRVIGQDEAVKSISKAIRRG 529
Query: 712 RIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRV 768
R+G R VGS F+GP VGK ++ ALAE +FG++ +I VD+S
Sbjct: 530 RVGLKDPKRPVGS-------FIFMGPTGVGKTELCKALAEAMFGDEKSMIRVDMS----- 577
Query: 769 SQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFLEDLDKAADPIVQSSL 825
+ ++ G V D + + R KPYSV+ ++++K A P + + L
Sbjct: 578 ----EFMEKHSVSKLVGSPPGYVGYDEGGQLTERVRRKPYSVLLFDEIEK-AHPDIFNIL 632
Query: 826 TKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ + G+ TDS GR V I + TS +
Sbjct: 633 LQILEDGRLTDSQGRVVDFRNTIIIMTSNV 662
>gi|189461350|ref|ZP_03010135.1| hypothetical protein BACCOP_02005 [Bacteroides coprocola DSM 17136]
gi|189431879|gb|EDV00864.1| ATPase family associated with various cellular activities (AAA)
[Bacteroides coprocola DSM 17136]
Length = 846
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 25/179 (13%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIA 743
K ++ L KV QD+A+ T+ +A+ R R+G N G +L FLGP VGK +A
Sbjct: 536 KGMKEQLLAKVIAQDKAVDTLVKAIQRSRVGLK---DPNKPIGTFL-FLGPTGVGKTHLA 591
Query: 744 SALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----I 796
LA+ +FG+ LI +D+S F +L G V Y +
Sbjct: 592 KELAKQMFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQL 638
Query: 797 YQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++ R KPYS+V L++++KA + + L + + G+ TDSYGR V + + TS I
Sbjct: 639 TEKVRRKPYSIVLLDEIEKAHSDVF-NLLLQVMDEGRLTDSYGRTVDFKNTVIIMTSNI 696
>gi|239623567|ref|ZP_04666598.1| ATPase AAA-2 domain-containing protein [Clostridiales bacterium
1_7_47_FAA]
gi|239521598|gb|EEQ61464.1| ATPase AAA-2 domain-containing protein [Clostridiales bacterium
1_7_47FAA]
Length = 876
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 23/170 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V Q+EA+ IS+A+ R R+G GR +GS FLGP VGK +++ AL
Sbjct: 510 LHERVVGQEEAVTAISKAIRRGRVGLKDPGRPIGS-------FLFLGPTGVGKTELSKAL 562
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
+E +FG + LI VD+S + ++ G V D + ++ R
Sbjct: 563 SEAMFGTENALIRVDMS---------EYMEKHSVSKMIGSPPGYVGYDEGGQLSEKVRRN 613
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
PYSV+ ++++K A P V + L + + G TD+ GR + I + TS
Sbjct: 614 PYSVILFDEIEK-AHPDVFNILLQVLDDGHITDAQGRKIDFKNTIIIMTS 662
>gi|154508516|ref|ZP_02044158.1| hypothetical protein ACTODO_01017 [Actinomyces odontolyticus ATCC
17982]
gi|153798150|gb|EDN80570.1| ATPase family associated with various cellular activities (AAA)
[Actinomyces odontolyticus ATCC 17982]
Length = 826
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 29/225 (12%)
Query: 640 KEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPF----DPRDYKTLRIA--LAEK 693
KE+ + G S E V + V+ S TG P K L++ L ++
Sbjct: 471 KEEAWKGGESDEIAEVGDQEIAEVLAMS------TGIPVVRLTQTETAKLLKMEDELHKR 524
Query: 694 VGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGN 753
V QDEA+ ++Q++ R R G + ++ G F GP VGK ++A ALAE +FG+
Sbjct: 525 VIGQDEAVKALAQSIRRTRSG----LKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGD 580
Query: 754 KGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFL 810
+ LI +D+S + +F G V D + ++ R KP+SVV
Sbjct: 581 EDALIQLDMSEFSEKHTASRLFGAPP---------GYVGYDEGGQLTEKVRRKPFSVVLF 631
Query: 811 EDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P + +SL + + G+ TDS GR V + + T+ +
Sbjct: 632 DEVEK-AHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNL 675
>gi|403382836|ref|ZP_10924893.1| protein ClpC [Paenibacillus sp. JC66]
Length = 807
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q EA+ +SQA+ R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHSRVIGQSEAVKAVSQAIRRARAGLKDPKRPMGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + G+ + ++ R KPYS
Sbjct: 559 AESMFGDENAIIRIDM-SEYMEKHSTSRLVGAPPGYVGYDEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNV 660
>gi|377573275|ref|ZP_09802342.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobilicoccus
pelagius NBRC 104925]
gi|377538010|dbj|GAB47507.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobilicoccus
pelagius NBRC 104925]
Length = 866
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 21/171 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +++AV R R G R +GS FLGP VGK ++A AL
Sbjct: 546 LHARVVGQEEAVDAVAEAVRRARAGLADPNRPIGS-------FLFLGPTGVGKTELARAL 598
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKP 804
AE +FG++ +++ D+S Q + + + + D + + R P
Sbjct: 599 AEALFGDEDRMVRFDMSEFQERHTVSRLVGAPPGYVGYEDAG--------QLTEAVRRTP 650
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
Y+VV L++++K A P V ++L + + G+ TD GR + S + + TS +
Sbjct: 651 YTVVLLDEIEK-AHPDVFNTLLQLLDAGRLTDGQGRTIDFSNTVVIMTSNV 700
>gi|380302202|ref|ZP_09851895.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium squillarum M-6-3]
Length = 863
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 111/248 (44%), Gaps = 31/248 (12%)
Query: 617 DLGLGKIYPSTRQEANTPKLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGE 676
D L T Q+ T + D KE+ + S VSE V+ A TG
Sbjct: 439 DFELAASLRDTEQQLKTER--DEKEKAWRHGDSDVVSTVSEEVIAEVL------AAATGI 490
Query: 677 PF----DPRDYKTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLA 730
P + + L + L ++V QDEAI +SQA+ R R G + + G
Sbjct: 491 PIVKLTEEESSRLLHMEDELHKRVIGQDEAIKALSQAIRRTRAG----LKDPKRPGGSFI 546
Query: 731 FLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK 790
F GP VGK ++A ALAE +FG++ LI +D+S + +F G
Sbjct: 547 FAGPTGVGKTELAKALAEFLFGDEDSLIQLDMSEFGEKHTASRLFGSPP---------GY 597
Query: 791 VLVD---YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGM 847
V D + ++ R KP+SVV ++++KA I +SL + + G+ TDS GR V
Sbjct: 598 VGYDEGGQLTEKVRRKPFSVVLFDEVEKAHVDIF-NSLLQILEDGRLTDSQGRTVDFKNT 656
Query: 848 IFVATSTI 855
+ + T+ +
Sbjct: 657 VIIMTTNL 664
>gi|337287439|ref|YP_004626912.1| ATP-dependent chaperone ClpB [Thermodesulfatator indicus DSM 15286]
gi|335360267|gb|AEH45948.1| ATP-dependent chaperone ClpB [Thermodesulfatator indicus DSM 15286]
Length = 872
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 20/195 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
LA++V QD AI I+ AV R R G R +GS FLGP VGK ++A AL
Sbjct: 570 LAQRVVGQDHAIKAIANAVRRARAGLKDPNRPIGS-------FMFLGPTGVGKTELAKAL 622
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +F + LI D+S + + + + G+ + + R +PYS
Sbjct: 623 AEFMFDTEEALIRFDMSEYMEKHAVSKLIGAPP-GYVGYEEGGQ-----LTEAVRRRPYS 676
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
V+ ++++K A P V + L + + G+ TDS GR V+ I + TS I G H V +
Sbjct: 677 VILFDEIEK-AHPDVFNILLQILDDGRLTDSKGRTVNFQNTIIIMTSNI--GSHYVM-EL 732
Query: 867 TPVKFSEEIILGAKR 881
K +E +++ A R
Sbjct: 733 EDRKDAERLVMDAVR 747
>gi|329769899|ref|ZP_08261298.1| hypothetical protein HMPREF0433_01062 [Gemella sanguinis M325]
gi|328837953|gb|EGF87577.1| hypothetical protein HMPREF0433_01062 [Gemella sanguinis M325]
Length = 824
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD+A+ ++++AV R R G R +GS FLGP VGK ++A +L
Sbjct: 522 LHERVIGQDDAVVSLAKAVRRARSGFKAQNRPIGS-------FIFLGPTGVGKTELAKSL 574
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
+E +F ++ +I +D+S +P+SI +L G V Y + ++
Sbjct: 575 SEALFSSEDNMIRIDMSE---YMEPHSI----------SRLVGAPPGYVGYEEAGQLSEQ 621
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV ++++KA P + + L + + G+ TD+ GR V I + TS +
Sbjct: 622 VRQKPYSVVLFDEIEKAH-PSIFNILLQVLDDGRLTDASGRTVDFKNTIIIMTSNV 676
>gi|257868131|ref|ZP_05647784.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC30]
gi|257874594|ref|ZP_05654247.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC10]
gi|257877740|ref|ZP_05657393.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC20]
gi|257802245|gb|EEV31117.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC30]
gi|257808758|gb|EEV37580.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC10]
gi|257811906|gb|EEV40726.1| ATP-dependent Clp protease [Enterococcus casseliflavus EC20]
Length = 829
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ +++++ R R G R +GS FLGP VGK ++A AL
Sbjct: 519 LHQRVVGQEEAVKAVARSIRRARSGLKDPNRPIGS-------FMFLGPTGVGKTELAKAL 571
Query: 747 AEIVFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPY 805
AE +FG++ L+ VD+S ++ S I D G L + I RSKPY
Sbjct: 572 AEAMFGSEDALVRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RSKPY 624
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
SV+ L++++K A P V + L + + G TD+ GR V I + TS I
Sbjct: 625 SVILLDEVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNI 673
>gi|390559270|ref|ZP_10243621.1| class III stress response-related ATPase, AAA+ superfamily
[Nitrolancetus hollandicus Lb]
gi|390174147|emb|CCF82914.1| class III stress response-related ATPase, AAA+ superfamily
[Nitrolancetus hollandicus Lb]
Length = 817
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 86/177 (48%), Gaps = 31/177 (17%)
Query: 689 ALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASA 745
AL E++ QDEAI T+S+AV R R G R +GS FLGP VGK +A A
Sbjct: 504 ALHERIIGQDEAIETLSKAVRRARAGLKDPRRPIGS-------FIFLGPTGVGKTLLARA 556
Query: 746 LAEIVFGNKGKLIHVDVSS-------EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
LAE +FG++ LI +D+S + V P + G L + +++
Sbjct: 557 LAEFIFGSEDSLIKIDMSEFMERHTVSRLVGAPPGYIGYEE---------GGQLTEAVHR 607
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
K YSV+ L++++K A P + L + + G TD+ GR V I V TS +
Sbjct: 608 ----KSYSVILLDEVEK-AHPEAFNMLLQILEDGTLTDAKGRRVDFRNTILVMTSNV 659
>gi|300768344|ref|ZP_07078247.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|300494071|gb|EFK29236.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
Length = 757
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 91/185 (49%), Gaps = 31/185 (16%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
KTL L V QD+A+ +++A+ R RIG GR +GS F+GP VGK
Sbjct: 456 KTLAPDLKSTVIGQDQAVEAVARAIRRNRIGLNGTGRPIGS-------FMFVGPTGVGKT 508
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY--- 795
++A LA+ +FG++ +I D+S +P+S+ KL G V Y
Sbjct: 509 ELAKQLAKELFGSQDAMIRFDMSE---YMEPHSV----------AKLIGSPPGYVGYEEA 555
Query: 796 --IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ ++ R PYS+V L++++K A P V + + G+ TDS GR VS I + TS
Sbjct: 556 GQLTEQVRRHPYSLVLLDEVEK-AHPDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTS 614
Query: 854 TILKG 858
G
Sbjct: 615 NAGTG 619
>gi|227509922|ref|ZP_03939971.1| ATP-binding Clp protease subunit [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190528|gb|EEI70595.1| ATP-binding Clp protease subunit [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 831
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 35/191 (18%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L ++V Q+EAI +S+++ R R G R +GS FLGP VGK ++
Sbjct: 515 LEAVLHQRVVGQEEAISAVSRSIRRARSGLKDPNRPIGS-------FMFLGPTGVGKTEL 567
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY----- 795
A A+AE VFG++ +I VD+S + +L G V Y
Sbjct: 568 AKAVAEAVFGSEDDMIRVDMSEYME-------------KYSTSRLIGSAPGYVGYDEGGQ 614
Query: 796 IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS-- 853
+ ++ R KPYSVV ++++K A P V + L + + G TDS GR + + + TS
Sbjct: 615 LTEKVRQKPYSVVLFDEVEK-AHPDVFNLLLQVLDDGYLTDSKGRKIDFRNTVIIMTSNL 673
Query: 854 --TILKGKHSV 862
T L+ K +V
Sbjct: 674 GATTLRDKKTV 684
>gi|399525068|ref|ZP_10765545.1| Clp amino terminal domain protein [Atopobium sp. ICM58]
gi|398373543|gb|EJN51465.1| Clp amino terminal domain protein [Atopobium sp. ICM58]
Length = 822
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 29/225 (12%)
Query: 640 KEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPF----DPRDYKTLRIA--LAEK 693
KE+ + G S E V + V+ S TG P K L++ L ++
Sbjct: 467 KEEAWKGGESDEIAEVGDQEIAEVLAMS------TGIPVVRLTQTETAKLLKMEDELHKR 520
Query: 694 VGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGN 753
V QDEA+ ++Q++ R R G + ++ G F GP VGK ++A ALAE +FG+
Sbjct: 521 VIGQDEAVKALAQSIRRTRSG----LKDPNRPGGSFIFAGPTGVGKTELAKALAEFLFGD 576
Query: 754 KGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFL 810
+ LI +D+S + +F G V D + ++ R KP+SVV
Sbjct: 577 EDALIQLDMSEFSEKHTASRLFGAPP---------GYVGYDEGGQLTEKVRRKPFSVVLF 627
Query: 811 EDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P + +SL + + G+ TDS GR V + + T+ +
Sbjct: 628 DEVEK-AHPDIFNSLLQILEEGRLTDSQGRKVDFKNTVIIMTTNL 671
>gi|227522983|ref|ZP_03953032.1| ATP-binding Clp protease subunit [Lactobacillus hilgardii ATCC
8290]
gi|227089801|gb|EEI25113.1| ATP-binding Clp protease subunit [Lactobacillus hilgardii ATCC
8290]
Length = 831
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 35/191 (18%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L ++V Q+EAI +S+++ R R G R +GS FLGP VGK ++
Sbjct: 515 LEAVLHQRVVGQEEAISAVSRSIRRARSGLKDPNRPIGS-------FMFLGPTGVGKTEL 567
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY----- 795
A A+AE VFG++ +I VD+S + +L G V Y
Sbjct: 568 AKAVAEAVFGSEDDMIRVDMSEYME-------------KYSTSRLIGSAPGYVGYDEGGQ 614
Query: 796 IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS-- 853
+ ++ R KPYSVV ++++K A P V + L + + G TDS GR + + + TS
Sbjct: 615 LTEKVRQKPYSVVLFDEVEK-AHPDVFNLLLQVLDDGYLTDSKGRKIDFRNTVIIMTSNL 673
Query: 854 --TILKGKHSV 862
T L+ K +V
Sbjct: 674 GATTLRDKKTV 684
>gi|146319629|ref|YP_001199341.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis 05ZYH33]
gi|253752626|ref|YP_003025767.1| stress response-related Clp ATPase [Streptococcus suis SC84]
gi|253754452|ref|YP_003027593.1| stress response-related Clp ATPase [Streptococcus suis P1/7]
gi|253756385|ref|YP_003029525.1| stress response-related Clp ATPase [Streptococcus suis BM407]
gi|386578782|ref|YP_006075188.1| ATP-binding subunit: ATP-dependent Clp protease [Streptococcus suis
GZ1]
gi|386582931|ref|YP_006079335.1| ATPase [Streptococcus suis SS12]
gi|386589054|ref|YP_006085455.1| ATPase [Streptococcus suis A7]
gi|389857491|ref|YP_006359734.1| ATPase [Streptococcus suis ST1]
gi|403062391|ref|YP_006650607.1| ATPase [Streptococcus suis S735]
gi|145690435|gb|ABP90941.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis 05ZYH33]
gi|251816915|emb|CAZ52564.1| putative stress response-related Clp ATPase [Streptococcus suis
SC84]
gi|251818849|emb|CAZ56692.1| putative stress response-related Clp ATPase [Streptococcus suis
BM407]
gi|251820698|emb|CAR47460.1| putative stress response-related Clp ATPase [Streptococcus suis
P1/7]
gi|292559245|gb|ADE32246.1| ATP-binding subunit: ATP-dependent Clp protease [Streptococcus suis
GZ1]
gi|353735077|gb|AER16087.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis SS12]
gi|353741209|gb|AER22216.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis ST1]
gi|354986215|gb|AER45113.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis A7]
gi|402809717|gb|AFR01209.1| ATPase [Streptococcus suis S735]
Length = 817
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q+EAI +S+A+ R + G R +GS FLGP
Sbjct: 503 DAKKYLNLEQELHKRVIGQEEAISAVSRAIRRNQSGIRTGHRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAEI+F ++ LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEILFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TD GR V S +
Sbjct: 603 GYEEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGVLTDRKGRKVDFSNTV 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|152988574|ref|YP_001345959.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PA7]
gi|452879079|ref|ZP_21956223.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa VRFPA01]
gi|150963732|gb|ABR85757.1| probable ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PA7]
gi|452184314|gb|EME11332.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa VRFPA01]
Length = 932
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 20/201 (9%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKK 741
K LR+ L ++V Q EAI +S AV R G + S+ FLGP VGK +
Sbjct: 582 KLLRMEERLHQRVIGQQEAITAVSDAVRLARAG----LRQGSRPIATFLFLGPTGVGKTE 637
Query: 742 IASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFR 801
+A ALAE+VFG++ +I +D+S + + + + G+ + + R
Sbjct: 638 LAKALAEVVFGDEDAMIRIDMSEYMERHAVSRLIGAPP-GYVGYEEGGQ-----LTERVR 691
Query: 802 SKPYSVVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST-----I 855
+PYSV+ L++++KA AD V + L + G+ TD GR V + I +ATS I
Sbjct: 692 RRPYSVILLDEIEKAHAD--VNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDLI 749
Query: 856 LKGKHSVHPQTTPVKFSEEII 876
+K + P K E++
Sbjct: 750 MKNAQAGEFAQPPEKLKRELM 770
>gi|72163275|ref|YP_290932.1| ATPase [Thermobifida fusca YX]
gi|71917007|gb|AAZ56909.1| ATPase [Thermobifida fusca YX]
Length = 830
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 11/166 (6%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V QD+AI +SQA+ R R G + + G F GP VGK ++ ALAE
Sbjct: 510 LHKRVIGQDDAIKALSQAIRRTRAG----LKDPKRPGGSFIFAGPSGVGKTELCKALAEF 565
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG++ LI +D+S + +F + + G+ + ++ R KP+SVV
Sbjct: 566 LFGDEDALIQLDMSEFMEKHTVSRLFGSPP-GYVGYEEGGQ-----LTEKVRRKPFSVVL 619
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++KA I +SL + + G+ TD+ GR+V I V T+ +
Sbjct: 620 FDEIEKAHGDIF-NSLLQVLEEGRLTDAQGRNVDFKNTIIVMTTNL 664
>gi|409100927|ref|ZP_11220951.1| ATP-dependent chaperone ClpB, partial [Pedobacter agri PB92]
Length = 845
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 87/180 (48%), Gaps = 25/180 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEAI IS A+ R R G + +GS FLG VGK ++A AL
Sbjct: 564 LHQRVAGQDEAIEAISDAIRRSRAGLQDKRKPIGS-------FIFLGTTGVGKTELAKAL 616
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE +F ++ L +D+S Q + + G V D + + R K
Sbjct: 617 AEFLFNDENALTRIDMSEYQERHAVSRLIGAPP---------GYVGYDEGGQLTEAVRRK 667
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVH 863
PYSVV L++++K A P V + L + + G+ TD+ GR V+ I + TS I G H +
Sbjct: 668 PYSVVLLDEIEK-AHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNI--GAHLIQ 724
>gi|357118066|ref|XP_003560780.1| PREDICTED: chaperone protein ClpB1-like [Brachypodium distachyon]
Length = 900
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 19/173 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L E+V QDEA+ ++QAV R R+G +G + + FLGP VGK ++A ALAE
Sbjct: 330 LHERVVGQDEAVNLVAQAVLRSRVG----IGQSGQPIASFLFLGPVGVGKTQLAKALAEK 385
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIY-------QEFRS 802
+F NK L D+S + + + +L+ ++Y +E R
Sbjct: 386 IFDNKKMLRRFDMSEYAGSGSVSHLIGGP-------RRFSYILILHVYEEEGLLTEEARR 438
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSV+ +++DK ADP V + + G TD G DV + V TS +
Sbjct: 439 YPYSVILFDEVDK-ADPSVFKVFIQLLDDGILTDGKGYDVDFKNTVIVVTSNL 490
>gi|227512856|ref|ZP_03942905.1| ATPase/chaperone ClpC [Lactobacillus buchneri ATCC 11577]
gi|227083856|gb|EEI19168.1| ATPase/chaperone ClpC [Lactobacillus buchneri ATCC 11577]
Length = 831
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 35/191 (18%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L ++V Q+EAI +S+++ R R G R +GS FLGP VGK ++
Sbjct: 515 LEAVLHQRVVGQEEAISAVSRSIRRARSGLKDPNRPIGS-------FMFLGPTGVGKTEL 567
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY----- 795
A A+AE VFG++ +I VD+S + +L G V Y
Sbjct: 568 AKAVAEAVFGSEDDMIRVDMSEYME-------------KYSTSRLIGSAPGYVGYDEGGQ 614
Query: 796 IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS-- 853
+ ++ R KPYSVV ++++K A P V + L + + G TDS GR + + + TS
Sbjct: 615 LTEKVRQKPYSVVLFDEVEK-AHPDVFNLLLQVLDDGYLTDSKGRKIDFRNTVIIMTSNL 673
Query: 854 --TILKGKHSV 862
T L+ K +V
Sbjct: 674 GATTLRDKKTV 684
>gi|347750804|ref|YP_004858369.1| ATP-dependent chaperone ClpB [Bacillus coagulans 36D1]
gi|347583322|gb|AEO99588.1| ATP-dependent chaperone ClpB [Bacillus coagulans 36D1]
Length = 861
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGN---GRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 568 LHERVIGQDEAVRLVSDAVLRARAGMKDPNRPIGS-------FIFLGPTGVGKTELAKAL 620
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQE 799
A+ +F ++ +I +D+S F +L G V Y + +
Sbjct: 621 AQHLFDDENHMIRIDMSEYME-------------KFAVSRLIGAPPGYVGYEEGGQLTEA 667
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSV+ L++++K A P V + L + + G+ TDS GR V I + TS I
Sbjct: 668 VRRKPYSVILLDEIEK-AHPEVFNILLQVLDDGRITDSQGRTVDFKNAIVIMTSNI 722
>gi|427392279|ref|ZP_18886284.1| hypothetical protein HMPREF9698_00090 [Alloiococcus otitis ATCC
51267]
gi|425731546|gb|EKU94362.1| hypothetical protein HMPREF9698_00090 [Alloiococcus otitis ATCC
51267]
Length = 743
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L AL E+V QD+A+ +S+A+ R RIG R +GS FLGP VGK
Sbjct: 430 KNLEQALEEQVIGQDKAVEKVSKAIRRNRIGLRKKNRPIGS-------FLFLGPTGVGKT 482
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++A +LA+ +FG+K +I +D+ SE S + G+ + ++
Sbjct: 483 ELAKSLAKELFGSKEAMIRLDM-SEYMEKHSTSRLIGSPPGYVGYDEAGQ-----LTEQV 536
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
R KPYS++ +++++KA P V + + + G TDS GR V+ I + TS
Sbjct: 537 RRKPYSLILVDEVEKAH-PDVLNMFLQILDDGHLTDSQGRRVNFKETIIIMTSN 589
>gi|355676751|ref|ZP_09060247.1| hypothetical protein HMPREF9469_03284 [Clostridium citroniae
WAL-17108]
gi|354813340|gb|EHE97951.1| hypothetical protein HMPREF9469_03284 [Clostridium citroniae
WAL-17108]
Length = 850
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 23/176 (13%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L L ++V Q+EA+ IS+A+ R R+G GR +GS FLGP VGK
Sbjct: 506 KNLEGILHQRVVGQEEAVTAISKAIRRGRVGLKDPGRPIGS-------FLFLGPTGVGKT 558
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIY 797
+++ AL+E +FG + LI VD+S + ++ G V D +
Sbjct: 559 ELSKALSEAMFGTENALIRVDMS---------EYMEKHSVSKMIGSPPGYVGYDEGGQLS 609
Query: 798 QEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
++ R PYSV+ ++++K A P V + L + + G TD+ GR + I + TS
Sbjct: 610 EKVRRNPYSVILFDEIEK-AHPDVFNILLQVLDDGHITDAQGRKIDFKNTIIIMTS 664
>gi|385825240|ref|YP_005861582.1| ATP-dependent clp protease ATP-binding subunit clpA-like protein
[Lactobacillus johnsonii DPC 6026]
gi|329666684|gb|AEB92632.1| ATP-dependent clp protease ATP-binding subunit clpA-like protein
[Lactobacillus johnsonii DPC 6026]
Length = 822
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEAI +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 514 LHERVIGQDEAISAVSRAIRRSRSGIKDENRPIGS-------FLFLGPTGVGKTELAKAL 566
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQE 799
A VFG++ +I VD+S + + Q KL G V Y + +
Sbjct: 567 AAAVFGSERNIIRVDMS--EYMDQ-----------IATSKLIGSAPGYVGYEEGGQLSER 613
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R PYSV+ L++++K A P V + L + + G TDS GR V I + TS +
Sbjct: 614 VRRNPYSVILLDEVEK-AHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL 668
>gi|325567772|ref|ZP_08144383.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
casseliflavus ATCC 12755]
gi|325158545|gb|EGC70692.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
casseliflavus ATCC 12755]
Length = 829
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ +++++ R R G R +GS FLGP VGK ++A AL
Sbjct: 519 LHQRVVGQEEAVKAVARSIRRARSGLKDPNRPIGS-------FMFLGPTGVGKTELAKAL 571
Query: 747 AEIVFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPY 805
AE +FG++ L+ VD+S ++ S I D G L + I RSKPY
Sbjct: 572 AEAMFGSEDALVRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RSKPY 624
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
SV+ L++++K A P V + L + + G TD+ GR V I + TS I
Sbjct: 625 SVILLDEVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNI 673
>gi|300857273|ref|YP_003782257.1| ATPase [Clostridium ljungdahlii DSM 13528]
gi|300437388|gb|ADK17155.1| predicted ATPase with chaperone activity [Clostridium ljungdahlii
DSM 13528]
Length = 813
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 25/184 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +IS+AV R R+G R +GS FLGP VGK +++ AL
Sbjct: 509 LHKRVVGQDEAVKSISKAVRRARVGLKDPKRPIGS-------FIFLGPTGVGKTELSKAL 561
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE +FG++ +I +D+S + + G V D + ++ R
Sbjct: 562 AEAMFGDENNMIRIDMS---------EYMEKHTVSRLIGSPPGYVGYDEGGQLTEKVRRN 612
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVH 863
PYSVV ++++K A P V + L + + G+ TD G+ ++ I + TS + G ++
Sbjct: 613 PYSVVLFDEIEK-AHPEVFNILLQILEDGRLTDGKGKTINFKNTIIIMTSNV--GAATIR 669
Query: 864 PQTT 867
Q +
Sbjct: 670 KQKS 673
>gi|341820740|emb|CCC57040.1| ATPase with chaperone activity, ATP-binding subunit [Weissella
thailandensis fsh4-2]
Length = 834
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 646 GSISAEFDAVSEGTFHNV--VQSSSCSAPHTGEPFDPRD-YKTLRIALAEKVGWQDEAIC 702
G A++D V + H++ V S P T +D L L ++V QDEA+
Sbjct: 478 GDTQAKYDLVL--SLHDIAEVVSEQTGVPVTQMEKSEKDRLINLEKVLHDRVVGQDEAVS 535
Query: 703 TISQAVSRWRIGNGRDVGSNSKR--GIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHV 760
I++++ R R G + KR G +L FLGP GK ++A ALAE +FG++ +I V
Sbjct: 536 AIARSIRRARSGL-----KDPKRPIGTFL-FLGPTGTGKTELAKALAEAMFGSEDNMIRV 589
Query: 761 DVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPI 820
D+ SE R + S + + G+ + ++ R +PYSVV L++ +K A P
Sbjct: 590 DM-SEYREAYSASRLVGSAPGYVGYEEGGQ-----LTEKVRRQPYSVVLLDEAEK-AHPD 642
Query: 821 VQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ + + + G TDS GR V I + TS +
Sbjct: 643 IYNLMLQVFDDGFLTDSKGRKVDFRNTIIIMTSNL 677
>gi|270291142|ref|ZP_06197365.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
acidilactici 7_4]
gi|270280538|gb|EFA26373.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
acidilactici 7_4]
Length = 823
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 89/185 (48%), Gaps = 31/185 (16%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L E V QDEA+ ++++A+ R R G N KR I FLGP VGK ++A LA
Sbjct: 513 LHEHVIGQDEAVSSVARAIRRARSGL-----KNPKRPIGSFMFLGPTGVGKTELAKTLAN 567
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQEFR 801
++FG++ +I +D+S F +L G V Y + ++ R
Sbjct: 568 VMFGSEDNMIRIDMSEYME-------------RFSTSRLVGSAPGYVGYDEGGQLTEQVR 614
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS----TILK 857
KPYSVV ++++K A P V + L + G TDS GR V I + TS T L+
Sbjct: 615 RKPYSVVLFDEVEK-AHPDVFNLLLQVFDDGFLTDSKGRRVDFRNTIIIMTSNLGATALR 673
Query: 858 GKHSV 862
+ SV
Sbjct: 674 DEKSV 678
>gi|433461663|ref|ZP_20419269.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
sp. BAB-2008]
gi|432189835|gb|ELK46900.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
sp. BAB-2008]
Length = 819
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 87/173 (50%), Gaps = 17/173 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L +V Q+EA+ IS+A+ R R G R +GS FLGP VGK ++
Sbjct: 509 LEETLHNRVIGQEEAVKAISKAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTEL 561
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A ALAE +FG + +I +D+ SE S + G+ + ++ R+
Sbjct: 562 ARALAESMFGEEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGYDEGGQ-----LTEKVRN 615
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYSVV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 616 KPYSVVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRLVDFRNTVLIMTSNV 667
>gi|315274644|ref|ZP_07869487.1| negative regulator of genetic competence ClpC/MecB, partial
[Listeria marthii FSL S4-120]
gi|313615725|gb|EFR89010.1| negative regulator of genetic competence ClpC/MecB [Listeria
marthii FSL S4-120]
Length = 338
Score = 75.9 bits (185), Expect = 1e-10, Method: Composition-based stats.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD A+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 23 LHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 75
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQE 799
AE +FG++ +I +D+S F +L G V Y + ++
Sbjct: 76 AESMFGDEDSMIRIDMSEYME-------------KFSTARLVGAPPGYVGYEEGGQLTEK 122
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 123 VRQKPYSVVLLDEIEK-AHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 177
>gi|420264399|ref|ZP_14767030.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
sp. C1]
gi|394768372|gb|EJF48300.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
sp. C1]
Length = 826
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ +++++ R R G R +GS FLGP VGK ++A AL
Sbjct: 516 LHQRVVGQEEAVKAVARSIRRARSGLKDPNRPIGS-------FMFLGPTGVGKTELAKAL 568
Query: 747 AEIVFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPY 805
AE +FG++ L+ VD+S ++ S I D G L + I RSKPY
Sbjct: 569 AEAMFGSEDALVRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RSKPY 621
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
SV+ L++++K A P V + L + + G TD+ GR V I + TS I
Sbjct: 622 SVILLDEVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNI 670
>gi|146321826|ref|YP_001201537.1| ATPases with chaperone activity, ATP-binding protein [Streptococcus
suis 98HAH33]
gi|145692632|gb|ABP93137.1| ATPases with chaperone activity, ATP-binding subunit [Streptococcus
suis 98HAH33]
Length = 817
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 25/184 (13%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVG 738
D + Y L L ++V Q+EAI +S+A+ R + G + + + FLGP VG
Sbjct: 503 DAKKYLNLEQELHKRVIGQEEAISAVSRAIRRNQSG----IRTGHRPSGSFMFLGPTGVG 558
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY- 795
K ++A ALAEI+F ++ LI D+S F +L G V Y
Sbjct: 559 KTELAKALAEILFDDESALIRFDMSEYME-------------KFAASRLNGAPPGYVGYE 605
Query: 796 ----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVA 851
+ ++ R+KPYSV+ ++L+K A P + + L + + G TD GR V S + +
Sbjct: 606 EGGELTEKVRNKPYSVLLFDELEK-AHPDIFNVLLQVLDDGVLTDRKGRKVDFSNTVIIM 664
Query: 852 TSTI 855
TS +
Sbjct: 665 TSNL 668
>gi|325102966|ref|YP_004272620.1| ATP-dependent chaperone ClpB [Pedobacter saltans DSM 12145]
gi|324971814|gb|ADY50798.1| ATP-dependent chaperone ClpB [Pedobacter saltans DSM 12145]
Length = 865
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 96/197 (48%), Gaps = 23/197 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L ++V QDEAI IS A+ R R G S+ K+ I FLG VGK ++A ALAE
Sbjct: 564 LHKRVAGQDEAIEAISDAIRRSRAG-----LSDQKKPIGSFIFLGTTGVGKTELAKALAE 618
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPY 805
+F ++ +I +D+S Q + + G V D + + R KPY
Sbjct: 619 FLFNDEQSMIRIDMSEYQERHAVSRLIGAPP---------GYVGYDEGGQLTEAVRRKPY 669
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQ 865
SV+ L++++KA P V + L + + G+ TD+ GR V+ I + TS I G H +
Sbjct: 670 SVILLDEIEKAH-PDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNI--GAHLIQDN 726
Query: 866 TTPVKFS--EEIILGAK 880
+ S EE+I K
Sbjct: 727 FKNLDESNHEEVIAKTK 743
>gi|295426424|ref|ZP_06819074.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
amylolyticus DSM 11664]
gi|295063792|gb|EFG54750.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
amylolyticus DSM 11664]
Length = 687
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 35/187 (18%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L L KV QDEA+ +++A+ R RIG +GR +GS F+GP VGK
Sbjct: 382 KNLASDLKSKVIGQDEAVDQVARAIRRNRIGFNKSGRPIGS-------FLFVGPTGVGKT 434
Query: 741 KIASALAEIVFGNKGKLIHVDVSS--EQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY- 795
++A LA+ +FG++ +I D+S EQ + KL G V Y
Sbjct: 435 ELAKQLAKQMFGSEDAMIRFDMSEYMEQ---------------YSVSKLIGSAPGYVGYE 479
Query: 796 ----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVA 851
+ ++ R PYS++ L++++K A+P V + + + G+ TDS GR VS I +
Sbjct: 480 EAGQLTEQVRHNPYSLILLDEVEK-ANPDVMNLFLQILDDGRLTDSQGRTVSFKDTIIIM 538
Query: 852 TSTILKG 858
TS +G
Sbjct: 539 TSNAGQG 545
>gi|418069700|ref|ZP_12706977.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus acidilactici MA18/5M]
gi|427440976|ref|ZP_18925093.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus lolii NGRI 0510Q]
gi|357536231|gb|EHJ20262.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus acidilactici MA18/5M]
gi|425787224|dbj|GAC45881.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Pediococcus lolii NGRI 0510Q]
Length = 823
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 89/185 (48%), Gaps = 31/185 (16%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L E V QDEA+ ++++A+ R R G N KR I FLGP VGK ++A LA
Sbjct: 513 LHEHVIGQDEAVSSVARAIRRARSGL-----KNPKRPIGSFMFLGPTGVGKTELAKTLAN 567
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQEFR 801
++FG++ +I +D+S F +L G V Y + ++ R
Sbjct: 568 VMFGSEDNMIRIDMSEYME-------------RFSTSRLVGSAPGYVGYDEGGQLTEQVR 614
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS----TILK 857
KPYSVV ++++K A P V + L + G TDS GR V I + TS T L+
Sbjct: 615 RKPYSVVLFDEVEK-AHPDVFNLLLQVFDDGFLTDSKGRRVDFRNTIIIMTSNLGATALR 673
Query: 858 GKHSV 862
+ SV
Sbjct: 674 DEKSV 678
>gi|302557367|ref|ZP_07309709.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
griseoflavus Tu4000]
gi|302474985|gb|EFL38078.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
griseoflavus Tu4000]
Length = 834
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 534 LHQRVVGQDEAVRVVSDAVMRSRAGLSSPDRPIGS-------FLFLGPTGVGKTELARAL 586
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +++ +D+S Q + + + + G+ + + R PYS
Sbjct: 587 AEALFGSEERMVRLDMSEYQERHTVSRLVGAPP-GYVGHEEAGQ-----LTEVVRRHPYS 640
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++ L++++K A P V + L + + G+ TDS GR V + + V TS +
Sbjct: 641 LLLLDEVEK-AHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNL 688
>gi|452974749|gb|EME74569.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Bacillus
sonorensis L12]
Length = 697
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + K L L +V Q EA+ +++AV R R G R VGS F+GP
Sbjct: 393 DQKKMKELEANLGSRVIGQKEAVKKVAKAVRRSRAGLKAKDRPVGS-------FLFVGPT 445
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDY 795
VGK +++ LAE +FG K +I +D+S + + G
Sbjct: 446 GVGKTELSKRLAEELFGTKDSIIRLDMSEYMEKHAVSKLIG------SPPGYVGHDEAGQ 499
Query: 796 IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ ++ R PYS+V L++++K A P VQ + + G+ TDS GR VS + + TS
Sbjct: 500 LTEKVRRNPYSIVLLDEIEK-AHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSNA 558
Query: 856 LKGKHSVHPQTTPVKFS-EEIILG 878
V + T V F+ EE ++G
Sbjct: 559 -----GVSEKQTTVGFNREERLMG 577
>gi|402299365|ref|ZP_10818976.1| class III stress response-related ATPase [Bacillus alcalophilus
ATCC 27647]
gi|401725403|gb|EJS98688.1| class III stress response-related ATPase [Bacillus alcalophilus
ATCC 27647]
Length = 813
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V Q+EA+ +IS+AV R R G R +GS FLGP VGK ++A A+AE
Sbjct: 511 RVVGQEEAVVSISKAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAVAET 563
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG++ +I +D+ SE S + + G+ + ++ R KPYSV+
Sbjct: 564 LFGDEDSVIRIDM-SEYMEKHATSRLVGSPPGYVGHEEGGQ-----LTEKVRRKPYSVIL 617
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G+ TDS GR V + TS +
Sbjct: 618 LDEIEK-AHPEVFNILLQVLEDGRLTDSKGRTVDFRNTAIIMTSNV 662
>gi|56419503|ref|YP_146821.1| ATP-dependent Clp protease [Geobacillus kaustophilus HTA426]
gi|56379345|dbj|BAD75253.1| ATP-dependent Clp protease [Geobacillus kaustophilus HTA426]
Length = 645
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 21/175 (12%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA+KV Q EA+ +++A+ R R G R +GS F+GP VGK
Sbjct: 414 KHLEENLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPIGS-------FLFVGPTGVGKT 466
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQ 798
++A LAE +FG K +I +D+S + + + F + + +
Sbjct: 467 ELAKTLAEELFGTKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEA--------GQLTE 518
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ R PY+++ L++++K A P VQ + + G+ TDS GR VS + +ATS
Sbjct: 519 KVRRNPYTIILLDEIEK-AHPDVQHIFLQILEDGRLTDSQGRTVSFKDTVIIATS 572
>gi|221632469|ref|YP_002521690.1| chaperone clpB 1 [Thermomicrobium roseum DSM 5159]
gi|221157168|gb|ACM06295.1| chaperone clpB 1 [Thermomicrobium roseum DSM 5159]
Length = 870
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +S A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 570 LHERVVGQDEAVRAVSNAIRRARAGLQDPNRPLGS-------FIFLGPTGVGKTELARAL 622
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +F ++ ++ +D+S Q + + + + G+ + + R +PYS
Sbjct: 623 AEFLFDDERAMVRIDMSEYQERHTVSRLIGAPP-GYVGYEEGGQ-----LTEAVRRRPYS 676
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P V + L + + G+ TD GR V + + TS +
Sbjct: 677 VVLFDEIEK-AHPEVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL 724
>gi|163791642|ref|ZP_02186039.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Carnobacterium sp. AT7]
gi|159873091|gb|EDP67198.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Carnobacterium sp. AT7]
Length = 830
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 106/231 (45%), Gaps = 19/231 (8%)
Query: 629 QEANTPKLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRI 688
+E K I+N Q G S+ V+E VV + E + L
Sbjct: 453 KEMKQRKKIENLLQKKEGKASSNSLQVTERDIAEVVSLWTSIPVQQMEQKESDRLMNLEK 512
Query: 689 ALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASA 745
L ++V Q++A+ ++S+A+ R R G R +GS FLGP VGK ++A A
Sbjct: 513 ILHKRVIGQEQAVGSVSRAIRRSRSGLKDPNRPIGS-------FMFLGPTGVGKTELAKA 565
Query: 746 LAEIVFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKP 804
LAE +FGN+ L+ VD+S ++ S I D G L + I R KP
Sbjct: 566 LAEAMFGNEEALVRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RQKP 618
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
YSV+ ++++K A P V + L + + G TDS GR V + + TS +
Sbjct: 619 YSVILFDEVEK-AHPDVFNILLQVLDDGHLTDSKGRKVDFKNTVMIMTSNL 668
>gi|410495833|ref|YP_006905679.1| Chaperone protein clpB [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|410440993|emb|CCI63621.1| Chaperone protein clpB [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 814
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q++A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQEDAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDAASALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNVLLQVLDDGMLTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|336437637|ref|ZP_08617341.1| hypothetical protein HMPREF0988_02926 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336004940|gb|EGN34993.1| hypothetical protein HMPREF0988_02926 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 814
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 31/188 (16%)
Query: 676 EPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFL 732
E D + + L L +V Q+EA+ +++AV R R+G R +GS FL
Sbjct: 494 EESDAQRLQKLEKTLHRRVIGQEEAVSAVARAVKRGRVGLKDPRRPIGS-------FLFL 546
Query: 733 GPDKVGKKKIASALAEIVFGNKGKLIHVDVSS-------EQRVSQPNSIFDCQNIDFCDC 785
GP VGK +++ ALAE +FG + +I VD+S + + P +
Sbjct: 547 GPTGVGKTELSKALAETLFGREDSMIRVDMSEYMEKHSVAKMIGSPPGYVGHEE------ 600
Query: 786 KLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSIS 845
G L D + R+ PYSV+ ++++K A P V + L + + G TDS GR V S
Sbjct: 601 ---GGQLSDQV----RTHPYSVILFDEIEK-AHPDVFNILLQVLDDGHITDSQGRKVDFS 652
Query: 846 GMIFVATS 853
+ + TS
Sbjct: 653 NTVIIMTS 660
>gi|283779663|ref|YP_003370418.1| ATPase AAA [Pirellula staleyi DSM 6068]
gi|283438116|gb|ADB16558.1| ATPase AAA-2 domain protein [Pirellula staleyi DSM 6068]
Length = 852
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 17/167 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L +KV QD+A+ I++AV R R G + + F GP VGK +A ALAE
Sbjct: 527 LHKKVISQDQAVTAIAKAVRRTRSG----LKDPRRPAGCFVFAGPTGVGKTLLAKALAEF 582
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
+FG+ LI +D+S + N+ G V + + ++ R +PY+
Sbjct: 583 MFGDADALIQIDMS---------EYMEKHNVSRLIGAPPGYVGYEEGGQLTEKIRRRPYA 633
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
VV L++++K A P V ++L + + G+ TDS+GR V +I + T+
Sbjct: 634 VVLLDEIEK-AHPDVFNTLLQVMEEGRLTDSFGRRVDFRNVILIMTT 679
>gi|428777732|ref|YP_007169519.1| ATP-dependent chaperone ClpB [Halothece sp. PCC 7418]
gi|428692011|gb|AFZ45305.1| ATP-dependent chaperone ClpB [Halothece sp. PCC 7418]
Length = 898
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGN---GRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V Q EA+ +S A+ R R G R +GS F+GP VGK ++A A+
Sbjct: 592 LHERVIGQKEAVAAVSAAIRRARAGMKDPARPIGS-------FLFMGPTGVGKTELARAI 644
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +F ++ LI +D+S + + + + G+ + ++ R +PYS
Sbjct: 645 AEFLFDSEESLIRIDMSEYMEKHSVSRLVGAPP-GYVGYEEGGQ-----LSEQIRRRPYS 698
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V I V TS I
Sbjct: 699 VVLLDEVEK-AHPDVFNILLQVLDDGRITDSQGRTVDFRNTIIVMTSNI 746
>gi|406967507|gb|EKD92571.1| hypothetical protein ACD_28C00401G0003 [uncultured bacterium]
Length = 857
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 21/198 (10%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKV 737
D K L L+ ++ Q EAI T+++A+ R R+G S+ R I F+GP V
Sbjct: 540 DIHRLKNLEAVLSSRIIGQKEAIATVAKAIRRSRVGV-----SHPNRPIASFIFMGPTGV 594
Query: 738 GKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD--- 794
GK ++ A+ E ++ +K LI +D+S + N G V +
Sbjct: 595 GKTELVKAITEEIYNDKDALIKIDMS---------EFMERHNASRLVGTTAGYVGYEDGG 645
Query: 795 YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
+ + R KPYSV+ ++++K A P V + L + + G TD G V I V TS
Sbjct: 646 QLTESVRRKPYSVLLFDEIEK-AHPDVFNILLQILDEGVLTDGKGHKVDFKNTIIVMTSN 704
Query: 855 ILKGKHSVHPQTTPVKFS 872
I G H + PV FS
Sbjct: 705 I--GAHQLTESAGPVGFS 720
>gi|304385424|ref|ZP_07367769.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
acidilactici DSM 20284]
gi|304328631|gb|EFL95852.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pediococcus
acidilactici DSM 20284]
Length = 823
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 89/185 (48%), Gaps = 31/185 (16%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L E V QDEA+ ++++A+ R R G N KR I FLGP VGK ++A LA
Sbjct: 513 LHEHVIGQDEAVSSVARAIRRARSGL-----KNPKRPIGSFMFLGPTGVGKTELAKTLAN 567
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQEFR 801
++FG++ +I +D+S F +L G V Y + ++ R
Sbjct: 568 VMFGSEDNMIRIDMSEYME-------------RFSTSRLVGSAPGYVGYDEGGQLTEQVR 614
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS----TILK 857
KPYSVV ++++K A P V + L + G TDS GR V I + TS T L+
Sbjct: 615 RKPYSVVLFDEVEK-AHPDVFNLLLQVFDDGFLTDSKGRRVDFRNTIIIMTSNLGATALR 673
Query: 858 GKHSV 862
+ SV
Sbjct: 674 DEKSV 678
>gi|302670237|ref|YP_003830197.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Butyrivibrio
proteoclasticus B316]
gi|302394710|gb|ADL33615.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Butyrivibrio
proteoclasticus B316]
Length = 854
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 21/175 (12%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L ++V Q++A+ +S+A+ R R+G R +GS FLGP VGK ++
Sbjct: 508 LESVLHKRVIGQEDAVKAVSKAIRRGRVGLQDPNRPIGS-------FLFLGPTGVGKTEL 560
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEF 800
+ ALAE +FG++ LI VD+S + + + F D + ++
Sbjct: 561 SKALAEAMFGDENALIRVDMSEYMEGHSVSKMIGSPPGYVGFDDG--------GQLSEKV 612
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R PYSV+ ++++K A P + + L + + G TDS GR VS I + TS +
Sbjct: 613 RRHPYSVILFDEIEK-AHPDIFNVLLQVLDDGHITDSKGRKVSFKNTILIMTSNV 666
>gi|28493032|ref|NP_787193.1| ATP-dependent Clp protease ATP-binding subunit [Tropheryma whipplei
str. Twist]
gi|28572245|ref|NP_789025.1| Clp-family ATP-binding protease/regulator [Tropheryma whipplei
TW08/27]
gi|28410376|emb|CAD66762.1| putative Clp-family ATP-binding protease/regulator [Tropheryma
whipplei TW08/27]
gi|28476072|gb|AAO44162.1| ATP-dependent Clp protease ATP-binding subunit [Tropheryma whipplei
str. Twist]
Length = 840
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 23/207 (11%)
Query: 655 VSEGTFHNVVQSSSCSAPHTGEP-FDPRDYKTLRIALAEK-----VGWQDEAICTISQAV 708
V EG V+ S+ TG P F + +++R+ + E+ V QDEAI ++S+A+
Sbjct: 479 VDEGLIAEVLASA------TGVPVFRLTEDESVRLMMMERSLHQRVIGQDEAISSLSRAM 532
Query: 709 SRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRV 768
R R G +D N G ++ F GP VGK ++A ALAE +F N+ L+ +D+S
Sbjct: 533 RRTRAGL-KD--PNRPSGSFI-FAGPTGVGKTELAKALAEFLFDNEDALVSLDMSEYGER 588
Query: 769 SQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKA 828
+ +F F + G+ + ++ R KP+SVV ++++K A P V +SL +
Sbjct: 589 HTVSRLFGAPP-GFVGFEEGGQ-----LTEKIRRKPFSVVLFDEIEK-AHPDVFNSLLQI 641
Query: 829 ISTGKFTDSYGRDVSISGMIFVATSTI 855
+ G+ +D+ GR V I V T+ +
Sbjct: 642 LEEGRLSDAQGRMVDFRNTIIVMTTNL 668
>gi|383784475|ref|YP_005469045.1| ATP-dependent Clp protease, ATPase subunit [Leptospirillum
ferrooxidans C2-3]
gi|383083388|dbj|BAM06915.1| ATP-dependent Clp protease, ATPase subunit [Leptospirillum
ferrooxidans C2-3]
Length = 813
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
+ +++ QDEAI I++++ R R G R +GS FLGP VGK ++A L
Sbjct: 506 MHQRIVGQDEAISAIARSIRRSRAGIKGEKRPIGS-------FIFLGPTGVGKTELARTL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FGN+ LI VD +S+ F+ + G + + R +PYS
Sbjct: 559 AETLFGNEEALIRVD------MSEYMERFNVSRLTGAPPGYVGYEEGGQLTERVRRRPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P + + L + + G TDS GR + + + TS +
Sbjct: 613 VVLFDEIEK-AHPDLFNVLLQILDDGYITDSLGRKIDFKNTVLIMTSNL 660
>gi|116334279|ref|YP_795806.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus brevis ATCC 367]
gi|116099626|gb|ABJ64775.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus brevis ATCC 367]
Length = 828
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 85/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q EA+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 517 LHQRVIGQSEAVSAVSRAIRRARSGLKDPNRPIGS-------FMFLGPTGVGKTELAKAL 569
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQE 799
AE +FG++ +I VD+S + +L G V Y + ++
Sbjct: 570 AEAMFGSEDNMIRVDMSEYME-------------KYSTSRLIGSAPGYVGYDEGGQLTEK 616
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV ++++K A P V + L + + G TDS GR V I + TS +
Sbjct: 617 VRQKPYSVVLFDEVEK-AHPDVFNILLQVLDDGYLTDSKGRKVDFRNTILIMTSNL 671
>gi|357163239|ref|XP_003579667.1| PREDICTED: chaperone protein ClpD2, chloroplastic-like
[Brachypodium distachyon]
Length = 942
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 94/185 (50%), Gaps = 22/185 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGI-WLAFLGPDKVGKKKIASALAE 748
L ++V QD+A+ IS+AV R R+G S+ R I L F GP VGK ++ ALA
Sbjct: 624 LRKRVIGQDDAVVAISRAVKRSRVGM-----SDPNRPIATLLFCGPTGVGKTELTKALAA 678
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
I FG++ ++ +D+S + + + F + G L + + R KP++
Sbjct: 679 IYFGSESSMVRLDMSEYMERHAVSKLIGSPPGYMGFGE----GGTLTEAV----RRKPFT 730
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS-----TILKGKHS 861
VV L++++K A P + + L + G TDS GR VS + V TS +I KG+ S
Sbjct: 731 VVLLDEIEK-AHPDIFNILLQVFEDGHLTDSQGRRVSFKNTLIVMTSNVGSASISKGRMS 789
Query: 862 VHPQT 866
+ QT
Sbjct: 790 IGFQT 794
>gi|297570833|ref|YP_003696607.1| ATPase AAA [Arcanobacterium haemolyticum DSM 20595]
gi|296931180|gb|ADH91988.1| ATPase AAA-2 domain protein [Arcanobacterium haemolyticum DSM
20595]
Length = 873
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 19/177 (10%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKK 741
K LR+ L ++V Q EA+ +SQA+ R R G + ++ G F GP VGK +
Sbjct: 504 KLLRMEEELHKRVIGQSEAVTALSQAIRRTRAG----LKDPNRPGGSFIFAGPTGVGKTE 559
Query: 742 IASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQ 798
+A ALAE +FG++ LI +D+S Q + +F G V D + +
Sbjct: 560 LAKALAEFLFGDEDALITLDMSEFQEKHTVSRLFGAPP---------GYVGYDEGGQLTE 610
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ R KP+SVV ++++KA + +SL + + G+ TDS GR V + + T+ +
Sbjct: 611 KVRRKPFSVVLFDEVEKAHQDLF-NSLLQILEEGRLTDSQGRVVDFKNTVIIMTTNL 666
>gi|406927447|gb|EKD63478.1| hypothetical protein ACD_51C00271G0002 [uncultured bacterium]
Length = 877
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L KV Q EAI IS+AV R R G R VGS FLGP VGK ++ L
Sbjct: 584 LGNKVIGQKEAIKAISEAVRRGRAGLKDPNRPVGS-------FLFLGPTGVGKTELTKVL 636
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
E +F +K +I +D+S + + + + G+ + ++ R KPYS
Sbjct: 637 TEELFADKEAMIRLDMSEYMEKHSVSKLIGSPP-GYIGHEEGGQ-----LTEKIRRKPYS 690
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++KA P V + L + + G+ TDS GR V+ + +ATS I
Sbjct: 691 VILLDEIEKA-HPDVFNILLQVLEDGRLTDSKGRTVNFKNCVIIATSNI 738
>gi|345853700|ref|ZP_08806581.1| Clp protease ATP binding subunit [Streptomyces zinciresistens K42]
gi|345634824|gb|EGX56450.1| Clp protease ATP binding subunit [Streptomyces zinciresistens K42]
Length = 850
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 17/173 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L E+V QDEA+ ++ AV R R G R +GS FLGP VGK ++
Sbjct: 537 LEAHLHERVVGQDEAVRVVADAVLRSRAGLASPDRPIGS-------FLFLGPTGVGKTEL 589
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A ALAE +FG++ +++ +D+S Q + + + + G+ + + R
Sbjct: 590 ARALAEALFGSEERMVRLDMSEYQERHTVSRLVGAPP-GYVGHEEAGQ-----LTEVVRR 643
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYS++ L++++K A P V + L + + G+ TD+ GR V S + V TS +
Sbjct: 644 HPYSLLLLDEIEK-AHPDVFNILLQVLDDGRLTDAQGRTVDFSNAVVVMTSNL 695
>gi|291546937|emb|CBL20045.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
sp. SR1/5]
Length = 821
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 22/190 (11%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
+ R L L ++V QDEA+ +++AV R R+G R +GS FLGP
Sbjct: 503 ESRRLANLEKVLKKRVIGQDEAVSAVARAVKRGRVGLKDPARPIGS-------FLFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDY 795
VGK +++ ALAE VFG++ +I VD+S + + + + G+
Sbjct: 556 GVGKTELSKALAEAVFGSEQAMIRVDMSEYMEKHSVSKMIGSPP-GYVGYEEGGQ----- 609
Query: 796 IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST- 854
+ ++ R PYSV+ ++++K A P V + L + + G TD+ GR V I + TS
Sbjct: 610 LSEKVRRNPYSVILFDEIEK-AHPDVFNILLQVLDDGHITDAQGRKVDFKQTIIIMTSNA 668
Query: 855 ----ILKGKH 860
I++ KH
Sbjct: 669 GAQMIMEPKH 678
>gi|387927239|ref|ZP_10129918.1| ATPase AAA-2 domain protein [Bacillus methanolicus PB1]
gi|387589383|gb|EIJ81703.1| ATPase AAA-2 domain protein [Bacillus methanolicus PB1]
Length = 722
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 17/182 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA KV Q+EA+ +++A+ R R G R +GS F+GP VGK
Sbjct: 425 KNLEANLATKVIGQEEAVKKVAKAIRRSRAGLKSKNRPIGS-------FLFVGPTGVGKT 477
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++ LAE +FG+K +I +D+S + +SI I G + ++
Sbjct: 478 ELTKVLAEELFGSKDAMIRLDMSE---YMEKHSI---SKIIGSPPGYVGHEDAGQLTEKV 531
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKH 860
R PYS++ L++++K A P VQ + + G+ TDS GR VS + + TS G
Sbjct: 532 RRNPYSIILLDEIEK-AHPDVQHMFLQILEDGRLTDSQGRTVSFKDSVIIMTSNAGVGHK 590
Query: 861 SV 862
++
Sbjct: 591 TI 592
>gi|298345554|ref|YP_003718241.1| chaperone ATPase [Mobiluncus curtisii ATCC 43063]
gi|304391110|ref|ZP_07373062.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|315656114|ref|ZP_07909005.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
gi|298235615|gb|ADI66747.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
curtisii ATCC 43063]
gi|304325993|gb|EFL93239.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|315493116|gb|EFU82716.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
Length = 884
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 19/177 (10%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKK 741
K LR+ L +++ QDEA+ +SQ++ R R G + + G F GP VGK +
Sbjct: 512 KLLRMEDELHKRIIGQDEAVKAVSQSIRRTRAG----LKDPKRPGGSFVFAGPTGVGKTE 567
Query: 742 IASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQ 798
+A ALAE +FG++ L+ +D+S + +F G V D + +
Sbjct: 568 LAKALAEFLFGDENALVQLDMSEFSEKHTASRLFGSPP---------GYVGYDEGGQLTE 618
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ R KP+SVV ++++K A P + +SL + + G TDS GR V I + T+ +
Sbjct: 619 KVRRKPFSVVLFDEVEK-AHPDIFNSLLQVLEEGHLTDSQGRLVDFKNTIIIMTTNL 674
>gi|195953047|ref|YP_002121337.1| ATPase AAA-2 domain-containing protein [Hydrogenobaculum sp.
Y04AAS1]
gi|195932659|gb|ACG57359.1| ATPase AAA-2 domain protein [Hydrogenobaculum sp. Y04AAS1]
Length = 982
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 13/164 (7%)
Query: 693 KVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAEIVF 751
+V QD+A+ +++A+ R R G + KR I FLGP VGK +++ ALAE++F
Sbjct: 686 RVIGQDDAVVAVAEAIRRARAGL-----KDPKRPIASFLFLGPTGVGKTELSKALAELLF 740
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G + LI +D+S + + + + + GK + + R KPYSV+ L+
Sbjct: 741 GEEDALIRLDMSEFKEEHTVSKLIGAPP-GYVGYEEGGK-----LTEAVRRKPYSVILLD 794
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++KA P V + + G+ TDS+GR V + + TS I
Sbjct: 795 EIEKAH-PRVFDLFLQVLDDGRLTDSHGRTVDFRNTVIIMTSNI 837
>gi|410696761|gb|AFV75829.1| ATPase with chaperone activity, ATP-binding subunit [Thermus
oshimai JL-2]
Length = 738
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 89/166 (53%), Gaps = 15/166 (9%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q+EAI ++ A+ R ++G +G ++ F+G VGK ++A ALAE+
Sbjct: 446 LRKRVVGQEEAIRALANALRRAQVG----LGGRTRVAASFLFVGQSGVGKTQLAKALAEV 501
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNI--DFCDCKLRGKVLVDYIYQEFRSKPYSV 807
+FG++ LI D+S Q +P+SI + + G+ + + R +P+SV
Sbjct: 502 LFGSERALIRFDMSEFQ---EPHSISKLIGAPPGYVGYEQGGR-----LTEAVRRQPFSV 553
Query: 808 VFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
V L++++K A P + ++ + + G+ TD GR V +I + TS
Sbjct: 554 VLLDEIEK-AHPDIYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTS 598
>gi|395243261|ref|ZP_10420248.1| ATP-dependent Clp protease [Lactobacillus hominis CRBIP 24.179]
gi|394484491|emb|CCI81256.1| ATP-dependent Clp protease [Lactobacillus hominis CRBIP 24.179]
Length = 824
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 100/219 (45%), Gaps = 39/219 (17%)
Query: 665 QSSSCSAPHTGEPF------DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---N 715
Q + A TG P + + L L E+V Q++AI +S+A+ R R G
Sbjct: 483 QIAKVVAQWTGIPVTRMKKSETKRLANLEAILHERVIGQNKAISAVSRAIRRSRSGIKDE 542
Query: 716 GRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIF 775
R +GS FLGP VGK ++A ALA+ VFG++ +I VD+S + + Q
Sbjct: 543 NRPIGS-------FLFLGPTGVGKTELAKALADAVFGSEKNIIRVDMS--EYMDQ----- 588
Query: 776 DCQNIDFCDCKLRGKV--LVDY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKA 828
KL G V Y + + R PYSV+ L++++K A P V + L +
Sbjct: 589 ------IATSKLIGSAPGYVGYEEGGQLSERVRRNPYSVILLDEVEK-AHPDVFNLLLQV 641
Query: 829 ISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTT 867
+ G TDS GR V I + TS + G S+ T
Sbjct: 642 LDEGFLTDSKGRKVDFRNTIIIMTSNL--GSRSIQEDKT 678
>gi|405984332|ref|ZP_11042635.1| ATP-dependent chaperone ClpB [Slackia piriformis YIT 12062]
gi|404388164|gb|EJZ83248.1| ATP-dependent chaperone ClpB [Slackia piriformis YIT 12062]
Length = 906
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 17/173 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L + L E+V QDEA+ ++ A+ R R G R +GS FLGP VGK ++
Sbjct: 567 LEVKLHERVVGQDEAVSAVASAIRRSRAGLSDPDRPIGS-------FLFLGPTGVGKTEL 619
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A ALAE +F ++ ++ +D +S+ F Q + G + + R
Sbjct: 620 AKALAEYLFDDERAMVRID------MSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRR 673
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+PYSV+ L++++KA + + L + + G+ TD GR VS I + TS +
Sbjct: 674 RPYSVILLDEMEKAHQDVF-NILLQVLDDGRLTDGQGRVVSFKNTIIIMTSNV 725
>gi|333373136|ref|ZP_08465052.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Desmospora sp.
8437]
gi|332970715|gb|EGK09695.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Desmospora sp.
8437]
Length = 814
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ ++S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHKRVIGQDEAVLSVSRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + G+ + ++ R KPYS
Sbjct: 559 AEAMFGDEEAIIRIDM-SEYMEKHSTSRLVGAPPGYVGYDEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P V + + + + G+ TD GR V + + TS +
Sbjct: 613 VVLFDEVEK-AHPEVFNVMLQVLEDGRLTDGKGRTVDFRNTVIIMTSNV 660
>gi|319649991|ref|ZP_08004140.1| ClpB protein [Bacillus sp. 2_A_57_CT2]
gi|317398172|gb|EFV78861.1| ClpB protein [Bacillus sp. 2_A_57_CT2]
Length = 865
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 21/182 (11%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVG 738
K LR+ L E+V QDEA+ +S AV R R G R +GS FLGP VG
Sbjct: 563 KLLRLESILHERVIGQDEAVQLVSDAVLRARAGIKDPNRPIGS-------FIFLGPTGVG 615
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K ++A ALA+ +F ++ ++I +D+S + + + + G+ + +
Sbjct: 616 KTELAKALAQSLFDSEEQIIRIDMSEYMEKHAVSRLIGAPP-GYVGYEEGGQ-----LTE 669
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R KPYSV+ L++++K A P V + L + + G+ TDS GR V + + TS I G
Sbjct: 670 AVRRKPYSVILLDEIEK-AHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNI--G 726
Query: 859 KH 860
H
Sbjct: 727 SH 728
>gi|345021357|ref|ZP_08784970.1| ATP-dependent Clp protease [Ornithinibacillus scapharcae TW25]
Length = 808
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ IS+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 508 LHDRVIGQEEAVKAISKAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 560
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +F ++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 561 AEAMFADEDAMIRIDM-SEYMEKHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 614
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 615 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRVVDFRNTVLIMTSNV 662
>gi|452943878|ref|YP_007500043.1| ATPase AAA-2 domain protein [Hydrogenobaculum sp. HO]
gi|452882296|gb|AGG15000.1| ATPase AAA-2 domain protein [Hydrogenobaculum sp. HO]
Length = 982
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 13/164 (7%)
Query: 693 KVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAEIVF 751
+V QD+A+ +++A+ R R G + KR I FLGP VGK +++ ALAE++F
Sbjct: 686 RVIGQDDAVVAVAEAIRRARAGL-----KDPKRPIASFLFLGPTGVGKTELSKALAELLF 740
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLE 811
G + LI +D+S + + + + + GK + + R KPYSV+ L+
Sbjct: 741 GEEDALIRLDMSEFKEEHTVSKLIGAPP-GYVGYEEGGK-----LTEAVRRKPYSVILLD 794
Query: 812 DLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+++KA P V + + G+ TDS+GR V + + TS I
Sbjct: 795 EIEKAH-PRVFDLFLQVLDDGRLTDSHGRTVDFRNTVIIMTSNI 837
>gi|302344661|ref|YP_003809190.1| ATP-dependent chaperone ClpB [Desulfarculus baarsii DSM 2075]
gi|301641274|gb|ADK86596.1| ATP-dependent chaperone ClpB [Desulfarculus baarsii DSM 2075]
Length = 861
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
+A++V Q +A+ ++ AV R R G R VGS F+GP VGK ++A AL
Sbjct: 569 IAKRVVGQKDAVEAVANAVRRARSGLQDPNRPVGS-------FIFMGPTGVGKTELARAL 621
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE +F ++ +I +D+S + ++ G V D Y+ + R K
Sbjct: 622 AEFMFDDEQAMIRLDMS---------EFMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRK 672
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVH 863
PYSVV ++++K A P V ++L + + G+ TD GR V + I + TS I G +
Sbjct: 673 PYSVVLFDEIEK-AHPDVFNALLQILDDGRLTDGQGRTVDFTNAIIIMTSNI--GSQYIQ 729
Query: 864 PQTTPVKFS--EEIILGAKRWQMQ 885
P + EE ++ A R Q +
Sbjct: 730 DLAGPHQRQRMEEAVMTALRAQFK 753
>gi|255282672|ref|ZP_05347227.1| negative regulator of genetic competence ClpC/MecB [Bryantella
formatexigens DSM 14469]
gi|255266693|gb|EET59898.1| ATPase family associated with various cellular activities (AAA)
[Marvinbryantia formatexigens DSM 14469]
Length = 819
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 17/171 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L ++V QDEA+ +++AV R R+G R +GS FLGP VGK ++
Sbjct: 506 LEQTLHKRVIGQDEAVTAVAKAVKRGRVGLKDPARPIGS-------FLFLGPTGVGKTEL 558
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
+ LAE+VFG++ +I VD+ SE S + + G+ + ++ R
Sbjct: 559 SKVLAEVVFGSEQSMIRVDM-SEYMEKHSVSRLVGSPPGYVGYEEGGQ-----LSEKVRR 612
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
PYSV+ L++++K A P V + L + + G TD+ GR V I + TS
Sbjct: 613 NPYSVILLDEVEK-AHPDVFNILLQVLDDGHITDAQGRKVDFKNTIIIMTS 662
>gi|319790046|ref|YP_004151679.1| ATPase AAA-2 domain protein [Thermovibrio ammonificans HB-1]
gi|317114548|gb|ADU97038.1| ATPase AAA-2 domain protein [Thermovibrio ammonificans HB-1]
Length = 847
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 19/177 (10%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVG 738
K LR+ L ++V Q+ AI IS+A+ R R G R +GS FLGP VG
Sbjct: 514 KLLRMEEELHKRVIGQERAIKAISEAIRRARAGLQPPNRPLGS-------FLFLGPTGVG 566
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K ++A ALAE +FG++ +I +D+S + + + + G+ + +
Sbjct: 567 KTELAKALAEYLFGDESAIIRLDMSEYMEKHAVSKLIGAPP-GYVGYEEGGQ-----LTE 620
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSV+ L++++K A P V + L + + G+ TD+ GR V S + + TS +
Sbjct: 621 AVRRKPYSVILLDEIEK-AHPDVFNILLQILDDGRLTDAKGRTVDFSNTVIIMTSNV 676
>gi|257871152|ref|ZP_05650805.1| ATP-dependent Clp protease [Enterococcus gallinarum EG2]
gi|257805316|gb|EEV34138.1| ATP-dependent Clp protease [Enterococcus gallinarum EG2]
Length = 827
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ +++++ R R G R +GS FLGP VGK ++A AL
Sbjct: 517 LHQRVVGQEEAVKAVARSIRRARSGLKDPNRPIGS-------FMFLGPTGVGKTELAKAL 569
Query: 747 AEIVFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPY 805
AE +FG++ L+ VD+S ++ S I D G L + I RSKPY
Sbjct: 570 AEAMFGSEDSLVRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RSKPY 622
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
SV+ L++++K A P V + L + + G TD+ GR V I + TS I
Sbjct: 623 SVILLDEVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNI 671
>gi|91200776|emb|CAJ73829.1| strongly similar to negative regulator of genetic competence
ClpC/MecB [Candidatus Kuenenia stuttgartiensis]
Length = 826
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 697 QDEAICTISQAV--SRWRIGN-GRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGN 753
Q+EA IS+A+ SR R+ N R V S F+GP VGK +A +LA++VFG
Sbjct: 518 QEEATRAISKAIRRSRARLKNPNRPVAS-------FIFVGPSGVGKTHLARSLAKLVFGE 570
Query: 754 KGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDL 813
+G L+ +D+S + + + + G+ + ++ R +PY+VV L+++
Sbjct: 571 EGSLVQIDMSEYMEKHSISRLIGAPP-GYIGYEEGGQ-----LTEKIRRRPYAVVLLDEI 624
Query: 814 DKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+K A P V + + + + GK TDS+GR V +I + TS I
Sbjct: 625 EK-AHPDVFNMMLQIMDEGKLTDSFGRHVDFRNVIIIMTSNI 665
>gi|402813960|ref|ZP_10863554.1| chaperone protein ClpB [Paenibacillus alvei DSM 29]
gi|402507807|gb|EJW18328.1| chaperone protein ClpB [Paenibacillus alvei DSM 29]
Length = 551
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 242 LHQRVIGQDEAVKAVSRAIRRARAGLKDPKRPMGS-------FIFLGPTGVGKTELARAL 294
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE + + + G+ + ++ R KPYS
Sbjct: 295 AESLFGDENAVIRIDM-SEYMEKHSTARLVGAPPGYVGYEEGGQ-----LTEKVRRKPYS 348
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 349 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNV 396
>gi|442803766|ref|YP_007371915.1| chaperone protein ClpB [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739616|gb|AGC67305.1| chaperone protein ClpB [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 810
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 90/175 (51%), Gaps = 17/175 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L L ++V QDEA+ +++A+ R R+G R VGS FLGP VGK
Sbjct: 502 KNLENVLHKRVIGQDEAVKAVAKAIRRGRVGLKDPKRPVGS-------FIFLGPTGVGKT 554
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
+++ ALAE +FG++ +I +D+ SE S + + G+ + ++
Sbjct: 555 ELSKALAEALFGDESHMIRLDM-SEYMEKHTVSRLVGSPPGYVGYEEGGQ-----LTEKV 608
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV ++++K A P V + L + + G+ TD+ GR V + + TS I
Sbjct: 609 RRKPYSVVLFDEIEK-AHPDVFNILLQILDDGRLTDASGRLVDFRNTVIIMTSNI 662
>gi|418584972|ref|ZP_13149029.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa MPAO1/P1]
gi|418591722|ref|ZP_13155613.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa MPAO1/P2]
gi|421515076|ref|ZP_15961762.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PAO579]
gi|375045304|gb|EHS37890.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa MPAO1/P1]
gi|375049448|gb|EHS41944.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa MPAO1/P2]
gi|404348804|gb|EJZ75141.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PAO579]
Length = 932
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q EAI +S AV R G + S+ FLGP VGK ++A ALAE+
Sbjct: 590 LHQRVIGQQEAITAVSDAVRLARAG----LRQGSRPIATFLFLGPTGVGKTELAKALAEV 645
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
VFG++ +I +D+S + + G V D + + R +PYS
Sbjct: 646 VFGDEDAMIRIDMS---------EYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYS 696
Query: 807 VVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST-----ILKGKH 860
V+ L++++KA AD V + L + G+ TD GR V + I +ATS I+K
Sbjct: 697 VILLDEIEKAHAD--VNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQ 754
Query: 861 SVHPQTTPVKFSEEII 876
+ P K E++
Sbjct: 755 AGEFAQPPEKLKRELM 770
>gi|377832293|ref|ZP_09815255.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
mucosae LM1]
gi|377553929|gb|EHT15646.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
mucosae LM1]
Length = 832
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 23/176 (13%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L ++V QDEA+ I++++ R R G R +GS FLGP VGK ++
Sbjct: 516 LERVLHQRVIGQDEAVSAIARSIRRARSGLKDPNRPIGS-------FMFLGPTGVGKTEL 568
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQE 799
A ALAE +FG++ +I VD+S + ++ G V D + ++
Sbjct: 569 AKALAEAMFGSENNMIRVDMS---------EYMEKYSVSRLIGAAPGYVGYDEGGQLTEK 619
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R PYSVV L++ +K A P V + L + + G TDS GR V I + TS +
Sbjct: 620 VRQHPYSVVLLDEAEK-AHPDVFNLLLQVLDDGYLTDSKGRRVDFRNTILIMTSNL 674
>gi|365902518|ref|ZP_09440341.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus malefermentans KCTC 3548]
Length = 832
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 35/191 (18%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L ++V Q+EA+ +S+A+ R R G R +GS FLGP VGK ++
Sbjct: 512 LESVLHKRVIGQEEAVSAVSRAIRRARSGLKDPNRPIGS-------FMFLGPTGVGKTEL 564
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY----- 795
A ALAE +FG++ +I VD+S + +L G V Y
Sbjct: 565 AKALAEAMFGSEDNMIRVDMSEYME-------------KYSTSRLIGSAPGYVGYDEGGQ 611
Query: 796 IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS-- 853
+ ++ R KPYSVV ++++K A P V + L + + G TDS GR V I + TS
Sbjct: 612 LTEKVRQKPYSVVLFDEVEK-AHPDVFNILLQVLDDGFLTDSKGRRVDFRNTILIMTSNL 670
Query: 854 --TILKGKHSV 862
T+L+ + +V
Sbjct: 671 GATLLRDEKTV 681
>gi|422759967|ref|ZP_16813729.1| negative regulator of genetic competence clpC/mecB [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
gi|322412802|gb|EFY03710.1| negative regulator of genetic competence clpC/mecB [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
Length = 814
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + Y L L ++V Q +A+ IS+A+ R + G R +GS FLGP
Sbjct: 503 DSKKYLNLEKELHKRVIGQKDAVSAISRAIRRNQSGIRTGKRPIGS-------FMFLGPT 555
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLV 793
VGK ++A ALAE++F + LI D+S F +L G V
Sbjct: 556 GVGKTELAKALAEVLFDDASALIRFDMSEYME-------------KFAASRLNGAPPGYV 602
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R+KPYSV+ ++++K A P + + L + + G TDS GR V S I
Sbjct: 603 GYDEGGELTEKVRNKPYSVLLFDEVEK-AHPDIFNILLQVLDDGMLTDSRGRKVDFSNTI 661
Query: 849 FVATSTI 855
+ TS +
Sbjct: 662 IIMTSNL 668
>gi|291542191|emb|CBL15301.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
bromii L2-63]
Length = 821
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V Q EA+ I++A+ R R+G R VGS FLGP VGK ++ AL
Sbjct: 514 LHERVIGQSEAVTAIAKAIRRGRVGLKDPKRPVGS-------FIFLGPTGVGKTELCKAL 566
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ ++ +D+S + + + + G+ + ++ R KPYS
Sbjct: 567 AEAMFGDENAMLRLDMSEYMEKHTVSKLIGSPP-GYVGFEEGGQ-----LTEKVRRKPYS 620
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P V + L + + G+ TDS GR V I + TS +
Sbjct: 621 VVLFDEIEK-AHPDVFNMLLQILEDGRLTDSQGRTVDFKNTIIIMTSNV 668
>gi|206889441|ref|YP_002248100.1| ClpC ATPase [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741379|gb|ACI20436.1| ClpC ATPase [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 816
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 20/185 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +++ QDEAI ++ +A+ R R G R +GS FLGP VGK ++A L
Sbjct: 507 LHQRIVGQDEAIKSVCKAIRRSRAGLKTKNRPIGS-------FFFLGPTGVGKTELAKVL 559
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +F ++ LI D +S+ F+ + G + ++ R +PYS
Sbjct: 560 AEFMFNDENALIKFD------MSEYMEKFNVSKLIGAPPGYVGYEEGGQLTEKIRKRPYS 613
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
VV ++++K A P V + L + + G TDS+GR V I + TS I G + ++
Sbjct: 614 VVLFDEIEK-AHPDVFNLLLQILDEGVLTDSFGRKVDFRNTIIIMTSNI--GARLIE-KS 669
Query: 867 TPVKF 871
TP+ F
Sbjct: 670 TPLGF 674
>gi|220927785|ref|YP_002504694.1| ATPase AAA [Clostridium cellulolyticum H10]
gi|219998113|gb|ACL74714.1| ATPase AAA-2 domain protein [Clostridium cellulolyticum H10]
Length = 810
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 23/172 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +IS+A+ R R+G R VGS F+GP VGK ++ AL
Sbjct: 508 LHKRVIGQDEAVKSISKAIRRGRVGLKDPKRPVGS-------FIFMGPTGVGKTELCKAL 560
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE +FG++ +I VD+S + ++ G V D + + R K
Sbjct: 561 AEAMFGDEKSMIRVDMS---------EFMEKHSVSKLVGSPPGYVGYDEGGQLTERVRRK 611
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSV+ ++++K A P + + L + + G+ TDS GR V I + TS +
Sbjct: 612 PYSVLLFDEIEK-AHPDIFNILLQILEDGRLTDSQGRVVDFRNTIIIMTSNV 662
>gi|357048825|ref|ZP_09110059.1| hypothetical protein HMPREF9478_00042 [Enterococcus saccharolyticus
30_1]
gi|355384778|gb|EHG31836.1| hypothetical protein HMPREF9478_00042 [Enterococcus saccharolyticus
30_1]
Length = 824
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ +++++ R R G R +GS FLGP VGK ++A AL
Sbjct: 514 LHQRVVGQEEAVKAVARSIRRARSGLKDPNRPIGS-------FMFLGPTGVGKTELAKAL 566
Query: 747 AEIVFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPY 805
AE +FG++ L+ VD+S ++ S I D G L + I RSKPY
Sbjct: 567 AEAMFGSEDSLVRVDMSEFMEKYSTSRLIGSPPGYVGYD---EGGQLTEKI----RSKPY 619
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
SV+ L++++K A P V + L + + G TD+ GR V I + TS I
Sbjct: 620 SVILLDEVEK-AHPDVFNILLQVLDDGHLTDAKGRKVDFRNTILIMTSNI 668
>gi|427382445|ref|ZP_18879165.1| hypothetical protein HMPREF9447_00198 [Bacteroides oleiciplenus YIT
12058]
gi|425729690|gb|EKU92541.1| hypothetical protein HMPREF9447_00198 [Bacteroides oleiciplenus YIT
12058]
Length = 842
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 87/173 (50%), Gaps = 25/173 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD AI +++A+ R R+G +D N G +L FLGP VGK +A LA+
Sbjct: 537 LQAKVIAQDPAIEKVTKAILRSRVGL-KD--PNRPIGTFL-FLGPTGVGKTHLAKQLAKY 592
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI VD+S F +L G V Y + ++ R
Sbjct: 593 MFGSADALIRVDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKIRR 639
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I
Sbjct: 640 KPYSIVLLDEIEK-AHPDVFNILLQLMDEGRLTDSYGRTVDFKNTVVIMTSNI 691
>gi|163782453|ref|ZP_02177451.1| ATPase subunit of ATP-dependent protease [Hydrogenivirga sp.
128-5-R1-1]
gi|159882486|gb|EDP75992.1| ATPase subunit of ATP-dependent protease [Hydrogenivirga sp.
128-5-R1-1]
Length = 1002
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L ++V Q+ A+ +S+A+ R R G + KR I FLGP VGK +++ ALAE
Sbjct: 686 LHKRVVDQEHAVKAVSEAIRRARAGL-----KDPKRPIASFLFLGPTGVGKTELSKALAE 740
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNI--DFCDCKLRGKVLVDYIYQEFRSKPYS 806
++FG + LI +D+S + +S+ + + GK + + R KPYS
Sbjct: 741 LLFGEEDALIRLDMSE---FKEEHSVAKLIGAPPGYVGYEEGGK-----LTEAVRRKPYS 792
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
V+ L++++K A P V + + G+ TDS+GR V + + TS I S +
Sbjct: 793 VILLDEIEK-AHPRVFDLFLQVLDDGRLTDSHGRTVDFRNTVIIMTSNI----GSQYLLN 847
Query: 867 TPVKFSEEII 876
PV SE+++
Sbjct: 848 IPVDASEDVV 857
>gi|320160812|ref|YP_004174036.1| chaperone ClpB [Anaerolinea thermophila UNI-1]
gi|319994665|dbj|BAJ63436.1| chaperone ClpB [Anaerolinea thermophila UNI-1]
Length = 861
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +S A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 567 LHQRVVGQDEAVRAVSNAIRRARAGLQDPNRPIGS-------FIFLGPTGVGKTELARAL 619
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +F ++ +I +D+S Q + + + + G+ + + R +PYS
Sbjct: 620 AEFMFDDEHAMIRIDMSEYQEKHTVSRLIGAPP-GYVGYEEGGQ-----LTEAVRRRPYS 673
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P V + L + + G+ TD GR V ++ + TS +
Sbjct: 674 VVLFDEIEK-AHPEVFNVLLQLLDDGRLTDGQGRTVDFRNVVVIMTSNL 721
>gi|224539989|ref|ZP_03680528.1| hypothetical protein BACCELL_04901 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518394|gb|EEF87499.1| hypothetical protein BACCELL_04901 [Bacteroides cellulosilyticus
DSM 14838]
Length = 840
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 87/173 (50%), Gaps = 25/173 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD AI +++A+ R R+G +D N G +L FLGP VGK +A LA+
Sbjct: 537 LQAKVIAQDPAIEKVTKAILRSRVGL-KD--PNRPIGTFL-FLGPTGVGKTHLAKQLAKY 592
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI VD+S F +L G V Y + ++ R
Sbjct: 593 MFGSADALIRVDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 639
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I
Sbjct: 640 KPYSIVLLDEIEK-AHPDVFNILLQLMDEGRLTDSYGRTVDFKNTVVIMTSNI 691
>gi|386056527|ref|YP_005973049.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa M18]
gi|347302833|gb|AEO72947.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa M18]
Length = 932
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q EAI +S AV R G + S+ FLGP VGK ++A ALAE+
Sbjct: 590 LHQRVIGQQEAITAVSDAVRLARAG----LRQGSRPIATFLFLGPTGVGKTELAKALAEV 645
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
VFG++ +I +D+S + + G V D + + R +PYS
Sbjct: 646 VFGDEDAMIRIDMS---------EYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYS 696
Query: 807 VVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST-----ILKGKH 860
V+ L++++KA AD V + L + G+ TD GR V + I +ATS I+K
Sbjct: 697 VILLDEIEKAHAD--VNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQ 754
Query: 861 SVHPQTTPVKFSEEII 876
+ P K E++
Sbjct: 755 AGEFAQPPEKLKRELM 770
>gi|334136731|ref|ZP_08510188.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF7]
gi|333605752|gb|EGL17109.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF7]
Length = 815
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHNRVIGQEEAVKAVSRAIRRARAGLKDPKRPMGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AESLFGDENAVIRIDM-SEYMEKHSTSRLVGAPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRTVDFRNTLIIMTSNV 660
>gi|107099444|ref|ZP_01363362.1| hypothetical protein PaerPA_01000456 [Pseudomonas aeruginosa PACS2]
gi|424943121|ref|ZP_18358884.1| probable ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa NCMG1179]
gi|346059567|dbj|GAA19450.1| probable ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa NCMG1179]
Length = 932
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q EAI +S AV R G + S+ FLGP VGK ++A ALAE+
Sbjct: 590 LHQRVIGQQEAITAVSDAVRLARAG----LRQGSRPIATFLFLGPTGVGKTELAKALAEV 645
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
VFG++ +I +D+S + + G V D + + R +PYS
Sbjct: 646 VFGDEDAMIRIDMS---------EYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYS 696
Query: 807 VVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST-----ILKGKH 860
V+ L++++KA AD V + L + G+ TD GR V + I +ATS I+K
Sbjct: 697 VILLDEIEKAHAD--VNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQ 754
Query: 861 SVHPQTTPVKFSEEII 876
+ P K E++
Sbjct: 755 AGEFAQPPEKLKRELM 770
>gi|404330422|ref|ZP_10970870.1| class III stress response-related ATPase [Sporolactobacillus vineae
DSM 21990 = SL153]
Length = 815
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEAI IS AV R R G R +GS FLGP VGK ++A A+
Sbjct: 508 LHKRVIGQDEAIRAISHAVRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAV 560
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 561 AETLFGDEEAIIRIDM-SEYMEKHTTSRLVGSPPGYVGHEEGGQ-----LTEKVRQKPYS 614
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ ++++K A P V + L + + G+ TDS GR V + TS +
Sbjct: 615 VILFDEIEK-AHPDVFNILLQVLDDGRLTDSKGRTVDFRNTAIIMTSNV 662
>gi|371777972|ref|ZP_09484294.1| negative regulator of genetic competence [Anaerophaga sp. HS1]
Length = 868
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L EKV QDEAI I +A+ R R G R +GS FLGP VGK +A L
Sbjct: 529 LKEKVIGQDEAITKIVKAIQRNRAGLKDPNRPIGS-------FVFLGPTGVGKTHLAKVL 581
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
A+ +F LI +D+S F + G + ++ R +PYS
Sbjct: 582 AQYMFDTTDALIRIDMSEYMEK------FSVSRLVGAPPGYIGYEEGGQLTEKVRRRPYS 635
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 636 VVLLDEIEK-AHPDVFNILLQVLDEGRLTDSLGRRVDFKNTVIIMTSNI 683
>gi|416856307|ref|ZP_11911951.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa 138244]
gi|334842182|gb|EGM20795.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa 138244]
gi|453045838|gb|EME93556.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa
PA21_ST175]
Length = 932
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q EAI +S AV R G + S+ FLGP VGK ++A ALAE+
Sbjct: 590 LHQRVIGQQEAITAVSDAVRLARAG----LRQGSRPIATFLFLGPTGVGKTELAKALAEV 645
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
VFG++ +I +D+S + + G V D + + R +PYS
Sbjct: 646 VFGDEDAMIRIDMS---------EYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYS 696
Query: 807 VVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST-----ILKGKH 860
V+ L++++KA AD V + L + G+ TD GR V + I +ATS I+K
Sbjct: 697 VILLDEIEKAHAD--VNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQ 754
Query: 861 SVHPQTTPVKFSEEII 876
+ P K E++
Sbjct: 755 AGEFAQPPEKLKRELM 770
>gi|255036728|ref|YP_003087349.1| ATP-dependent chaperone ClpB [Dyadobacter fermentans DSM 18053]
gi|254949484|gb|ACT94184.1| ATP-dependent chaperone ClpB [Dyadobacter fermentans DSM 18053]
Length = 867
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 93/189 (49%), Gaps = 26/189 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L ++V Q+EAI +S AV R R G ++KR I FLGP VGK ++A LAE
Sbjct: 562 LHQRVAGQNEAIEVVSDAVRRSRAGL-----QDAKRPIGSFLFLGPTGVGKTELAKTLAE 616
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPY 805
+F ++ ++ +D+S Q + + G V D + + R KPY
Sbjct: 617 YLFNDENAMVRIDMSEYQERHAVSRLVGAPP---------GYVGYDEGGQLTEAVRRKPY 667
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQ 865
SV+ L++++K A P V + L + + G+ TD+ GR + I + TS I G H +
Sbjct: 668 SVILLDEIEK-AHPDVWNILLQVLDEGRLTDNKGRVANFKNTIIIMTSNI--GSHIIQE- 723
Query: 866 TTPVKFSEE 874
KF+E+
Sbjct: 724 ----KFAED 728
>gi|392981869|ref|YP_006480456.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa DK2]
gi|419755939|ref|ZP_14282291.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PADK2_CF510]
gi|451987573|ref|ZP_21935728.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Pseudomonas
aeruginosa 18A]
gi|384397601|gb|EIE44012.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PADK2_CF510]
gi|392317374|gb|AFM62754.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa DK2]
gi|451754723|emb|CCQ88251.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Pseudomonas
aeruginosa 18A]
Length = 932
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q EAI +S AV R G + S+ FLGP VGK ++A ALAE+
Sbjct: 590 LHQRVIGQQEAITAVSDAVRLARAG----LRQGSRPIATFLFLGPTGVGKTELAKALAEV 645
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
VFG++ +I +D+S + + G V D + + R +PYS
Sbjct: 646 VFGDEDAMIRIDMS---------EYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYS 696
Query: 807 VVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST-----ILKGKH 860
V+ L++++KA AD V + L + G+ TD GR V + I +ATS I+K
Sbjct: 697 VILLDEIEKAHAD--VNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQ 754
Query: 861 SVHPQTTPVKFSEEII 876
+ P K E++
Sbjct: 755 AGEFAQPPEKLKRELM 770
>gi|313111914|ref|ZP_07797704.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa 39016]
gi|355646788|ref|ZP_09054623.1| hypothetical protein HMPREF1030_03709 [Pseudomonas sp. 2_1_26]
gi|386068630|ref|YP_005983934.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa NCGM2.S1]
gi|310884206|gb|EFQ42800.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa 39016]
gi|348037189|dbj|BAK92549.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa NCGM2.S1]
gi|354828327|gb|EHF12450.1| hypothetical protein HMPREF1030_03709 [Pseudomonas sp. 2_1_26]
Length = 932
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q EAI +S AV R G + S+ FLGP VGK ++A ALAE+
Sbjct: 590 LHQRVIGQQEAITAVSDAVRLARAG----LRQGSRPIATFLFLGPTGVGKTELAKALAEV 645
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
VFG++ +I +D+S + + G V D + + R +PYS
Sbjct: 646 VFGDEDAMIRIDMS---------EYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYS 696
Query: 807 VVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST-----ILKGKH 860
V+ L++++KA AD V + L + G+ TD GR V + I +ATS I+K
Sbjct: 697 VILLDEIEKAHAD--VNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQ 754
Query: 861 SVHPQTTPVKFSEEII 876
+ P K E++
Sbjct: 755 AGEFAQPPEKLKRELM 770
>gi|154249061|ref|YP_001409886.1| ATPase [Fervidobacterium nodosum Rt17-B1]
gi|154152997|gb|ABS60229.1| ATPase AAA-2 domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 822
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 689 ALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKR--GIWLAFLGPDKVGKKKIASAL 746
AL E+V QDEAI IS+A+ R R G + +R G++L FLGP VGK ++A AL
Sbjct: 512 ALHERVVGQDEAINAISRAIRRARSGL-----KDPRRPVGVFL-FLGPTGVGKTELAKAL 565
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ LI D +S+ F + G + ++ R +P+S
Sbjct: 566 AEYLFGDEKALIRFD------MSEYMEKFSVSRLIGAPPGYVGYEEGGTLTEKVRRRPFS 619
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ ++++K A P V + L + + G+ TDS G V I + TS I
Sbjct: 620 VILFDEIEK-AHPDVFNLLLQIMDDGRLTDSQGHVVDFRNTIIIMTSNI 667
>gi|423225844|ref|ZP_17212311.1| hypothetical protein HMPREF1062_04497 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392631118|gb|EIY25094.1| hypothetical protein HMPREF1062_04497 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 840
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 87/173 (50%), Gaps = 25/173 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD AI +++A+ R R+G +D N G +L FLGP VGK +A LA+
Sbjct: 537 LQAKVIAQDPAIEKVTKAILRSRVGL-KD--PNRPIGTFL-FLGPTGVGKTHLAKQLAKY 592
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI VD+S F +L G V Y + ++ R
Sbjct: 593 MFGSADALIRVDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 639
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I
Sbjct: 640 KPYSIVLLDEIEK-AHPDVFNILLQLMDEGRLTDSYGRTVDFKNTVVIMTSNI 691
>gi|374294995|ref|YP_005045186.1| chaperone ATPase [Clostridium clariflavum DSM 19732]
gi|359824489|gb|AEV67262.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
clariflavum DSM 19732]
Length = 810
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +S+A+ R R+G R VGS FLGP VGK +++ AL
Sbjct: 508 LHNRVIGQEEAVKAVSKAIRRGRVGLKDPKRPVGS-------FIFLGPTGVGKTELSKAL 560
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 561 AEALFGDENAIIRIDM-SEYMEKHSVSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 614
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 615 VVLFDEIEK-AHPDVFNLLLQILEDGRLTDSQGRVVDFKNTVIIMTSNV 662
>gi|117927429|ref|YP_871980.1| ATPase [Acidothermus cellulolyticus 11B]
gi|117647892|gb|ABK51994.1| ATPase AAA-2 domain protein [Acidothermus cellulolyticus 11B]
Length = 839
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V QDEAI +SQA+ R R G + + G F GP VGK +++ ALAE
Sbjct: 510 LHKRVIGQDEAIKALSQAIRRTRAG----LKDPKRPGGSFIFAGPSGVGKTELSKALAEF 565
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
+FG++ LI +D+S + +F G V D + ++ R KP+S
Sbjct: 566 LFGDEDSLIQLDMSEFMEKHTVSRLFGSPP---------GYVGYDEGGQLTEKVRRKPFS 616
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A P + +SL + + G+ TD+ GR V + + T+ +
Sbjct: 617 VVLFDEVEK-AHPDIFNSLLQILEDGRLTDAQGRVVDFKNTVIIMTTNL 664
>gi|134298058|ref|YP_001111554.1| ATPase [Desulfotomaculum reducens MI-1]
gi|134050758|gb|ABO48729.1| ATPase AAA-2 domain protein [Desulfotomaculum reducens MI-1]
Length = 812
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 85/172 (49%), Gaps = 23/172 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QD+A+ +S+AV R R G R VGS FLGP VGK ++A AL
Sbjct: 510 LHRRVVGQDDAVKAVSRAVRRARAGLKDPKRPVGS-------FIFLGPTGVGKTELARAL 562
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE +FG++ L+ +D+S + + G V D + + R K
Sbjct: 563 AESLFGDEDALVRIDMS---------EYMEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRK 613
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSVV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 614 PYSVVLLDEIEK-AHPDVFNILLQVLEDGRLTDSRGRVVDFRNTVIIMTSNV 664
>gi|189347884|ref|YP_001944413.1| ATPase AAA [Chlorobium limicola DSM 245]
gi|189342031|gb|ACD91434.1| ATPase AAA-2 domain protein [Chlorobium limicola DSM 245]
Length = 442
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 23/172 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +S+AV R R G G R +GS FLGP VGK ++A L
Sbjct: 139 LHKRVIGQDEAVSAVSEAVKRSRAGMGDEKRPIGS-------FIFLGPTGVGKTELARTL 191
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
A+ +F ++ LI +D+S + N+ G V + + + R K
Sbjct: 192 ADYLFDDEDALIRIDMS---------EYMESHNVSRLVGAPPGYVGYEEGGQLTEAVRRK 242
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
P+SVV L++++KA P V + L + + G+ TDS G V+ I + TS I
Sbjct: 243 PFSVVLLDEIEKAH-PDVFNILLQILDDGRLTDSKGHTVNFKNTIIIMTSNI 293
>gi|167772949|ref|ZP_02445002.1| hypothetical protein ANACOL_04337 [Anaerotruncus colihominis DSM
17241]
gi|167664882|gb|EDS09012.1| ATP-dependent chaperone protein ClpB [Anaerotruncus colihominis DSM
17241]
Length = 869
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +++A+ R R G GR +GS FLGP VGK ++A AL
Sbjct: 573 LHERVIGQDEAVSKVAEAILRSRAGIQDQGRPIGS-------FLFLGPTGVGKTELAKAL 625
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
A+ +F ++ ++ +D +++ F + G + + R KPYS
Sbjct: 626 AQALFDDEKNIVRID------MTEYMEKFSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYS 679
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ ++++K A P V + L + + G+ TDS GR V I + TS +
Sbjct: 680 VILFDEIEK-AHPDVFNILLQVLDDGRITDSQGRTVDFKNTIIILTSNL 727
>gi|114567873|ref|YP_755027.1| ATPase [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114338808|gb|ABI69656.1| ATPases with chaperone activity, ATP-binding subunit
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 828
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 19/223 (8%)
Query: 637 IDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGW 696
I+N+ + +S S +V E VV S S + + + L ++V
Sbjct: 471 IENERKEWSSQRSLNAGSVGEDEIAAVVSSWSGIPVNKLAEEESERLVQMEDVLHQRVIG 530
Query: 697 QDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAEIVFGNKG 755
Q+EA+ +S+AV R R G N KR I FLGP VGK ++A +LAE +FG++
Sbjct: 531 QEEAVKAVSRAVRRARAGL-----KNPKRPIGSFVFLGPTGVGKTELARSLAEAMFGSED 585
Query: 756 KLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFLED 812
+I +D+S + + G V D + ++ R KPYSV+ L++
Sbjct: 586 AIIRLDMS---------EYMEKHAVSRMIGSPPGYVGYDEGGQLTEKVRRKPYSVILLDE 636
Query: 813 LDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++K A P V + L + + G+ TD GR V + + TS +
Sbjct: 637 IEK-AHPDVFNILLQVMEDGRLTDGQGRTVDFRNTVVIMTSNV 678
>gi|452951873|gb|EME57315.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus ruber
BKS 20-38]
Length = 851
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 17/184 (9%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKK 741
K LR+ L ++V QDEA+ ++S AV R R G N G +L FLGP VGK +
Sbjct: 562 KLLRMESELGKRVVGQDEAVQSVSDAVRRSRAGV---ADPNRPTGSFL-FLGPTGVGKTE 617
Query: 742 IASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNI--DFCDCKLRGKVLVDYIYQE 799
+A ALA+ +F ++ ++ +D+S S+ +S+ + + G+ + +
Sbjct: 618 LAKALADFLFDDERAMVRIDMSE---YSEKHSVARLVGAPPGYVGYESGGQ-----LTEA 669
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
R +PYSVV ++++K A P V +L + + G+ TD GR V I + TS + G
Sbjct: 670 VRRRPYSVVLFDEVEK-AHPDVFDTLLQVLDDGRLTDGQGRTVDFRNTILILTSNLGAGG 728
Query: 860 HSVH 863
H
Sbjct: 729 DREH 732
>gi|429217740|ref|YP_007179384.1| chaperone ATPase [Deinococcus peraridilitoris DSM 19664]
gi|429128603|gb|AFZ65618.1| ATPase with chaperone activity, ATP-binding subunit [Deinococcus
peraridilitoris DSM 19664]
Length = 743
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 662 NVVQSSSCSAPHTGEPFDPRD--------------------YKTLRIALAEKVGWQDEAI 701
N+ + S TGEPF RD L +L ++V Q +AI
Sbjct: 395 NLSLGVTVSEDDTGEPFVSRDDIESVINSMGGIYAEESAEKLGDLEDSLTDQVYGQPDAI 454
Query: 702 CTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVD 761
+S A+ R R+G +G ++ F+GP VGK +A ALA +FG++ LI +D
Sbjct: 455 KALSSALRRARVG----LGGRTRVSASFLFVGPSGVGKTHLAKALARSLFGSERALIRID 510
Query: 762 VSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIV 821
+S Q S S + + G+ + + R +P+SV+ L++++K A P V
Sbjct: 511 MSEFQE-SHSVSKLIGSPPGYVGYEQGGR-----LTEAVRRQPFSVILLDEIEK-AHPDV 563
Query: 822 QSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
++ + + G+ TD GR V I + TS
Sbjct: 564 YNTFLQVLDDGRLTDGLGRTVDFRRTILIMTS 595
>gi|189465632|ref|ZP_03014417.1| hypothetical protein BACINT_01990 [Bacteroides intestinalis DSM
17393]
gi|189437906|gb|EDV06891.1| ATPase family associated with various cellular activities (AAA)
[Bacteroides intestinalis DSM 17393]
Length = 840
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 87/173 (50%), Gaps = 25/173 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD AI +++A+ R R+G +D N G +L FLGP VGK +A LA+
Sbjct: 537 LQAKVIAQDPAIEKVTKAILRSRVGL-KD--PNRPIGTFL-FLGPTGVGKTHLAKQLAKY 592
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI VD+S F +L G V Y + ++ R
Sbjct: 593 MFGSADALIRVDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 639
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I
Sbjct: 640 KPYSIVLLDEIEK-AHPDVFNILLQLMDEGRLTDSYGRTVDFKNTVVIMTSNI 691
>gi|168701615|ref|ZP_02733892.1| ATPase AAA-2 domain protein [Gemmata obscuriglobus UQM 2246]
Length = 871
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 23/176 (13%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L ++V QDEA+ + +AV R R G R +GS FLGP VGK ++
Sbjct: 564 LEAELHKRVIGQDEAVTAVGEAVVRARSGLKDPNRPIGS-------FIFLGPTGVGKTEL 616
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQE 799
A ALAE +F ++ +I +D+S Q + + G V D + +
Sbjct: 617 ARALAEFLFDDEKAMIRIDMSEYQEKHTVSRLVGAPP---------GYVGYDEGGQLTEA 667
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R +PYSVV ++++K A P V ++L + + G+ TD GR V I + TS +
Sbjct: 668 VRRRPYSVVLFDEIEK-AHPDVFNTLLQVLDDGRLTDGQGRTVDFKNTIVIMTSNV 722
>gi|60681972|ref|YP_212116.1| negative regulator of genetic competence [Bacteroides fragilis NCTC
9343]
gi|265764025|ref|ZP_06092593.1| ATP-dependent chaperone ClpB [Bacteroides sp. 2_1_16]
gi|336410061|ref|ZP_08590543.1| hypothetical protein HMPREF1018_02559 [Bacteroides sp. 2_1_56FAA]
gi|375358729|ref|YP_005111501.1| negative regulator of genetic competence [Bacteroides fragilis
638R]
gi|383118624|ref|ZP_09939365.1| hypothetical protein BSHG_2624 [Bacteroides sp. 3_2_5]
gi|423250261|ref|ZP_17231277.1| hypothetical protein HMPREF1066_02287 [Bacteroides fragilis
CL03T00C08]
gi|423255764|ref|ZP_17236693.1| hypothetical protein HMPREF1067_03337 [Bacteroides fragilis
CL03T12C07]
gi|423257137|ref|ZP_17238060.1| hypothetical protein HMPREF1055_00337 [Bacteroides fragilis
CL07T00C01]
gi|423265892|ref|ZP_17244895.1| hypothetical protein HMPREF1056_02582 [Bacteroides fragilis
CL07T12C05]
gi|60493406|emb|CAH08192.1| negative regulator of genetic competence [Bacteroides fragilis NCTC
9343]
gi|251945928|gb|EES86335.1| hypothetical protein BSHG_2624 [Bacteroides sp. 3_2_5]
gi|263256633|gb|EEZ27979.1| ATP-dependent chaperone ClpB [Bacteroides sp. 2_1_16]
gi|301163410|emb|CBW22961.1| negative regulator of genetic competence [Bacteroides fragilis
638R]
gi|335946442|gb|EGN08248.1| hypothetical protein HMPREF1018_02559 [Bacteroides sp. 2_1_56FAA]
gi|387778613|gb|EIK40708.1| hypothetical protein HMPREF1055_00337 [Bacteroides fragilis
CL07T00C01]
gi|392649846|gb|EIY43518.1| hypothetical protein HMPREF1067_03337 [Bacteroides fragilis
CL03T12C07]
gi|392653647|gb|EIY47302.1| hypothetical protein HMPREF1066_02287 [Bacteroides fragilis
CL03T00C08]
gi|392703550|gb|EIY96694.1| hypothetical protein HMPREF1056_02582 [Bacteroides fragilis
CL07T12C05]
Length = 844
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD+AI + +A+ R R+G +D N G ++ FLGP VGK +A LA+
Sbjct: 536 LQSKVIAQDDAIKKLVKAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKELAKY 591
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 592 MFGSSDALIRIDMSEFME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 638
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I G +
Sbjct: 639 KPYSIVLLDEIEK-AHPDVFNLLLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--GTRQL 695
Query: 863 HPQTTPVKFSEEIILGAK---RWQMQTAISHGFA 893
V F+ + L K R +Q A++ FA
Sbjct: 696 KEFGRGVGFATQSRLDDKEFSRSVIQKALNKSFA 729
>gi|188997476|ref|YP_001931727.1| ATPase AAA-2 domain-containing protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932543|gb|ACD67173.1| ATPase AAA-2 domain protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 814
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V QDEAI I++A+ R +G G + G++L FLGP VGK + A ALAE
Sbjct: 499 LHKRVVGQDEAITAIAKAIRRNSVGLK---GRHRPIGVFL-FLGPTGVGKTETAKALAEY 554
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG + LI D+S + + + + G+ + + R KPYSV+
Sbjct: 555 LFGREDALIRFDMSEYMEKHTVSRLIGAPP-GYVGYEEGGQ-----LTEAVRRKPYSVIL 608
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P V + + G+ TDS GR V S I + TS +
Sbjct: 609 FDEIEK-AHPDVFNIFLQIFDDGRLTDSLGRVVDFSNTIIIMTSNL 653
>gi|423271605|ref|ZP_17250575.1| hypothetical protein HMPREF1079_03657 [Bacteroides fragilis
CL05T00C42]
gi|423275491|ref|ZP_17254435.1| hypothetical protein HMPREF1080_03088 [Bacteroides fragilis
CL05T12C13]
gi|392697301|gb|EIY90487.1| hypothetical protein HMPREF1079_03657 [Bacteroides fragilis
CL05T00C42]
gi|392701939|gb|EIY95089.1| hypothetical protein HMPREF1080_03088 [Bacteroides fragilis
CL05T12C13]
Length = 844
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD+AI + +A+ R R+G +D N G ++ FLGP VGK +A LA+
Sbjct: 536 LQSKVIAQDDAIKKLVKAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKELAKY 591
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 592 MFGSSDALIRIDMSEFME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 638
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I G +
Sbjct: 639 KPYSIVLLDEIEK-AHPDVFNLLLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--GTRQL 695
Query: 863 HPQTTPVKFSEEIILGAK---RWQMQTAISHGFA 893
V F+ + L K R +Q A++ FA
Sbjct: 696 KEFGRGVGFATQSRLDDKEFSRSVIQKALNKSFA 729
>gi|423284252|ref|ZP_17263136.1| hypothetical protein HMPREF1204_02674 [Bacteroides fragilis HMW
615]
gi|404580245|gb|EKA84956.1| hypothetical protein HMPREF1204_02674 [Bacteroides fragilis HMW
615]
Length = 844
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD+AI + +A+ R R+G +D N G ++ FLGP VGK +A LA+
Sbjct: 536 LQSKVIAQDDAIKKLVKAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKELAKY 591
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 592 MFGSSDALIRIDMSEFME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 638
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I G +
Sbjct: 639 KPYSIVLLDEIEK-AHPDVFNLLLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--GTRQL 695
Query: 863 HPQTTPVKFSEEIILGAK---RWQMQTAISHGFA 893
V F+ + L K R +Q A++ FA
Sbjct: 696 KEFGRGVGFATQSRLDDKEFSRSVIQKALNKSFA 729
>gi|367001248|ref|XP_003685359.1| hypothetical protein TPHA_0D02890 [Tetrapisispora phaffii CBS 4417]
gi|357523657|emb|CCE62925.1| hypothetical protein TPHA_0D02890 [Tetrapisispora phaffii CBS 4417]
Length = 803
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 103/238 (43%), Gaps = 24/238 (10%)
Query: 647 SISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQ 706
SI DAV+ VV + P T D + L E+V QDEAI IS
Sbjct: 451 SIVLLHDAVTSQDISKVVAKMTGIPPDTLMKGDKDRLLFMEQTLKERVVGQDEAIDVISD 510
Query: 707 AVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSE 765
AV R G D KR I FLGP GK ++ ALAE +F ++ ++ D+S
Sbjct: 511 AVRLQRAGLTSD-----KRPIASFMFLGPTGTGKTELTKALAEFLFDDETNIVRFDMSEY 565
Query: 766 QRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFLEDLDKAADPIVQ 822
Q + + G V+ + + + R KPYSV+ ++ +KA P V
Sbjct: 566 QEKHSVSKLIGAPP---------GYVMSESGGQLTEAVRRKPYSVILFDEFEKAH-PDVC 615
Query: 823 SSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEIILGAK 880
L + + GK +DS G V I V TS I G+ + TT +E+ I+G K
Sbjct: 616 KILLQVLDEGKLSDSLGHHVDFRNTIIVMTSNI--GQDILLTDTTA---TEDGIVGEK 668
>gi|347754249|ref|YP_004861813.1| chaperone activity ATPase [Candidatus Chloracidobacterium
thermophilum B]
gi|347586767|gb|AEP11297.1| ATPases with chaperone activity, ATP-binding subunit [Candidatus
Chloracidobacterium thermophilum B]
Length = 765
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 27/198 (13%)
Query: 683 YKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
+ + LA++V Q EA+ ++++ R R+ G + K L FLGP VGK ++
Sbjct: 449 FANMEAELAKRVIGQREAVESVAR---RLRLNKGPLKENFYKPDGVLLFLGPTGVGKTEL 505
Query: 743 ASALAEIVFGNKGKLIHVDVSS--------EQRVSQPNSIFDCQNIDFCDCKLRGKVLVD 794
A A+AE +FG++ K+I +D+S E+ + P I + RG +L +
Sbjct: 506 AKAVAEFMFGDEHKMIRIDMSEYQDGVVAVEKLIGMPRGIVGSE---------RGGILTE 556
Query: 795 YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
+ R PY+V+ L++++KA+ P + + +A G TD G+ V +S I + TS
Sbjct: 557 RL----RDNPYTVLLLDEIEKAS-PYLLNLFLQAFDEGWLTDGRGKKVYLSDAIIIMTSN 611
Query: 855 ILKGKHSVHPQTTPVKFS 872
+ G + P+ F
Sbjct: 612 L--GSENFKKYMKPLGFG 627
>gi|224006840|ref|XP_002292380.1| hypothetical protein THAPSDRAFT_23902 [Thalassiosira pseudonana
CCMP1335]
gi|220972022|gb|EED90355.1| hypothetical protein THAPSDRAFT_23902 [Thalassiosira pseudonana
CCMP1335]
Length = 808
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 15/168 (8%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L E+V QDEAI ++QA+ R R G + SK L FLGP VGK ++A AL+E
Sbjct: 500 LRERVVGQDEAIQVVTQAIQRSRAG----LNDPSKPIASLIFLGPTGVGKTELAKALSEF 555
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKPYSV 807
+F + +I +D+S + + + + + G L D + R +PYSV
Sbjct: 556 MFDTEDAMIRIDMSEYMEKHTVSRLLGAPPGYVGYDE----GGQLTDAV----RRRPYSV 607
Query: 808 VFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ ++++KA P V + + + + G+ TDS GR V + + TS I
Sbjct: 608 LLFDEMEKAH-PDVFNVMLQMLDDGRLTDSKGRHVDFKNCVIIFTSNI 654
>gi|406603060|emb|CCH45395.1| ATP-dependent Clp protease ATP-binding subunit ClpB
[Wickerhamomyces ciferrii]
Length = 802
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 96/221 (43%), Gaps = 28/221 (12%)
Query: 648 ISAEFDAVSEGTFHNVVQSSSCS---APHTGEPFDP-----RD-YKTLRIALAEKVGWQD 698
IS + D + H V S S + TG P D +D + +L EKV QD
Sbjct: 442 ISEQEDQKQDSMLHESVTSDDISKVISKMTGIPIDTVLKGDKDRLLYMEDSLKEKVVGQD 501
Query: 699 EAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAEIVFGNKGKL 757
EAI IS AV R G D KR I FLGP GK ++ +LAE +F + +
Sbjct: 502 EAIHAISDAVRLQRAGLTSD-----KRPIASFMFLGPTGTGKTELTKSLAEFLFDDSSNV 556
Query: 758 IHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFLEDLD 814
I D+S Q + + G V+ + + + R KPYSVV ++ +
Sbjct: 557 IRFDMSEFQEKHTVSKLIGAPP---------GYVMSESGGQLTEAVRRKPYSVVLFDEFE 607
Query: 815 KAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KA P V L + + GK TDS+G V I V TS I
Sbjct: 608 KAH-PDVCKVLLQVLDEGKLTDSHGTHVDFRNTIIVMTSNI 647
>gi|377809915|ref|YP_005005136.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Pediococcus
claussenii ATCC BAA-344]
gi|361056656|gb|AEV95460.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Pediococcus
claussenii ATCC BAA-344]
Length = 735
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 106/234 (45%), Gaps = 34/234 (14%)
Query: 635 KLIDNKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKV 694
KL NKE +A V+E +V+S + + + + L L V
Sbjct: 381 KLESNKENASDNDSTA---TVTEKDMEQIVESKTDIPVGDLQQQEQEQLQNLAPNLKSHV 437
Query: 695 GWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVF 751
QDEA+ I++A+ R RIG GR +GS F+GP VGK ++A LA +F
Sbjct: 438 IGQDEAVDKIARAIRRNRIGLNGTGRPIGS-------FLFVGPTGVGKTELAKQLAASLF 490
Query: 752 GNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRSKP 804
G++ +I D+S +P+SI KL G V Y + ++ R P
Sbjct: 491 GSEDSMIRFDMSE---YMEPHSI----------SKLIGSPPGYVGYEEAGQLTEQVRRHP 537
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
YS+V L++++KA P V + + G+ TDS GR VS I + TS G
Sbjct: 538 YSLVLLDEVEKAH-PDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGSG 590
>gi|389842947|ref|YP_006345027.1| chaperone ATPase [Mesotoga prima MesG1.Ag.4.2]
gi|387857693|gb|AFK05784.1| ATPase with chaperone activity, ATP-binding subunit [Mesotoga prima
MesG1.Ag.4.2]
Length = 829
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 676 EPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFL 732
E D TL AL E++ QDEAI +++++ R R G R +G+ FL
Sbjct: 502 EETDSEKLLTLENALHERIVSQDEAISAVAKSIRRARSGLKDPRRPIGT-------FLFL 554
Query: 733 GPDKVGKKKIASALAEIVFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKV 791
GP VGK ++A ALAE +FG+ L+ D+S +R S I D G
Sbjct: 555 GPTGVGKTELAKALAEYLFGDDKALVRFDMSEYMERFSVSRLIGAPPGYVGYD---EGGT 611
Query: 792 LVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVA 851
L + I R +P+SV+ ++++K A P + + L + + G+ TDS GR V I +
Sbjct: 612 LTERI----RKRPFSVILFDEIEK-AHPDIFNILLQIMDDGRLTDSQGRQVDFRNTIVIM 666
Query: 852 TSTILKGKHSVHPQTTPVKFSE 873
TS + G ++ + + F E
Sbjct: 667 TSNL--GGEFINKTKSSIGFVE 686
>gi|403388307|ref|ZP_10930364.1| negative regulator of genetic competence mecB/clpC [Clostridium sp.
JC122]
Length = 809
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ +IS+AV R R+G R +GS FLGP VGK ++ ALA+
Sbjct: 510 RVIGQDEAVESISKAVRRARVGLKDPKRPIGS-------FIFLGPTGVGKTELTKALAQA 562
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
+FG++ LI +D+S + + G V D + ++ R PYS
Sbjct: 563 MFGDENNLIRIDMSEYMEKHSVSKLIGAP---------PGYVGFDEGGQLTEKVRRNPYS 613
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
V+ ++++K A P V ++L + + G+ TD G+ V+ I + TS + G + Q
Sbjct: 614 VILFDEIEK-AHPDVFNALLQILEDGRLTDGKGKTVNFKNTIIIMTSNV--GASDIKKQN 670
Query: 867 T 867
T
Sbjct: 671 T 671
>gi|436834724|ref|YP_007319940.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Fibrella
aestuarina BUZ 2]
gi|384066137|emb|CCG99347.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Fibrella
aestuarina BUZ 2]
Length = 855
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
LA++V Q AI +++ AV R R G R +GS FLGP VGK ++A AL
Sbjct: 562 LAQRVAGQPAAIRSVANAVRRSRTGLQDPKRPIGS-------FLFLGPTGVGKTELAKAL 614
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
E +F N+ L+ +D+S Q + + L G + + R KPYS
Sbjct: 615 GEALFNNEQSLVRIDMSEYQERQTVSRLIGAA------PGLVGYDEAGQLTEAVRRKPYS 668
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+V L++++K A P V + L + + G+ TD+ GR V I + T+ +
Sbjct: 669 IVLLDEIEK-AHPDVWNILLQILDDGRLTDNKGRVVDFKNTIVIMTANL 716
>gi|53713701|ref|YP_099693.1| ATP-dependent Clp protease [Bacteroides fragilis YCH46]
gi|52216566|dbj|BAD49159.1| ATP-dependent Clp protease [Bacteroides fragilis YCH46]
Length = 844
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD+AI + +A+ R R+G +D N G ++ FLGP VGK +A LA+
Sbjct: 536 LQSKVIAQDDAIKKLVKAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKELAKY 591
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 592 MFGSSDALIRIDMSEFME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 638
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I G +
Sbjct: 639 KPYSIVLLDEIEK-AHPDVFNLLLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--GTRQL 695
Query: 863 HPQTTPVKFSEEIILGAKRWQ---MQTAISHGFA 893
V F+ + L K + +Q A++ FA
Sbjct: 696 KEFGRGVGFATQSRLDDKEFSRSVIQKALNKSFA 729
>gi|379728103|ref|YP_005320288.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Melissococcus
plutonius DAT561]
gi|376319006|dbj|BAL62793.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / negative
regulator of genetic competence clcC/mecB [Melissococcus
plutonius DAT561]
Length = 829
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 518 LHKRVVGQNEAVKAVSKAIRRARSGLKDPKRPIGS-------FMFLGPTGVGKTELAKAL 570
Query: 747 AEIVFGNKGKLIHVDVS-------SEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQE 799
AE +FG++ LI VD+S + + V P + G L + I
Sbjct: 571 AEAMFGSEDALIRVDMSEFMERYNTSRLVGSPPGYVGYEE---------GGQLTEKI--- 618
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++KA + + L + + G TDS GR + I + TS I
Sbjct: 619 -RQKPYSVVLLDEIEKAHTDVF-NMLLQVLDDGHLTDSKGRKIDFRNTIVIMTSNI 672
>gi|336113490|ref|YP_004568257.1| ATP-dependent chaperone ClpB [Bacillus coagulans 2-6]
gi|335366920|gb|AEH52871.1| ATP-dependent chaperone ClpB [Bacillus coagulans 2-6]
Length = 860
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 84/176 (47%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGN---GRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 568 LHERVIGQDEAVRLVSDAVLRARAGMKDPNRPIGS-------FIFLGPTGVGKTELAKAL 620
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
A+ +F + +I +D+S F +L G V Y + +
Sbjct: 621 AQHLFDGENHMIRIDMSEYME-------------KFAVSRLIGAPPGYVGYEEGGQLTEA 667
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSV+ L++++K A P V + L + + G+ TDS GR V I + TS I
Sbjct: 668 VRRKPYSVILLDEIEK-AHPEVFNILLQVLDDGRITDSQGRTVDFKNTIVIMTSNI 722
>gi|406879045|gb|EKD27779.1| hypothetical protein ACD_79C00582G0001, partial [uncultured
bacterium]
Length = 502
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L+ V Q EA+ +S+A+ R R N ++ N G +L FLGP VGK +A LAE
Sbjct: 199 LSNAVVGQKEAVLNVSRAIKRSR-ANLQN--PNRPLGSFL-FLGPTGVGKTYLAKKLAEF 254
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FGN+ LI +D +S+ F + G + ++ R KPYS+V
Sbjct: 255 MFGNRDALITID------MSEFAEKFAVSRLTGSPPGYVGHEEGGQLTEKVRRKPYSIVL 308
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTT 867
++++K A P + + + GK TDS GR V I + TS I G H + T
Sbjct: 309 FDEIEK-AHPDIMDIFLQILEDGKLTDSLGRAVDFRNTILIMTSNI--GSHKIMQNKT 363
>gi|383828348|ref|ZP_09983437.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora xinjiangensis XJ-54]
gi|383461001|gb|EID53091.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora xinjiangensis XJ-54]
Length = 843
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 693 KVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFG 752
+V QDEA+ ++++V R R G + G +L FLGP VGK ++A ALAE +FG
Sbjct: 539 RVVGQDEAVAAVAESVRRARAGLAE---PDRPSGSFL-FLGPTGVGKTELARALAEALFG 594
Query: 753 NKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLED 812
++ +I +D+S + + + + G+ + + R +PYSV+ L++
Sbjct: 595 SEESMIRLDMSEYGERHTVSRLVGAPP-GYVGYEEAGQ-----LTEAVRRRPYSVILLDE 648
Query: 813 LDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++K A P V + L + + G+ TD GR V+ + + + TS I
Sbjct: 649 IEK-AHPDVFNMLLQVLEDGRLTDGRGRTVNFTNTVLIMTSNI 690
>gi|226323338|ref|ZP_03798856.1| hypothetical protein COPCOM_01112 [Coprococcus comes ATCC 27758]
gi|225208022|gb|EEG90376.1| ATPase family associated with various cellular activities (AAA)
[Coprococcus comes ATCC 27758]
Length = 815
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 17/174 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L L ++V Q+EAI +S+AV R R+G R +GS FLGP VGK
Sbjct: 503 KKLDKTLEKRVIGQEEAIQALSKAVKRGRVGLKDPARPIGS-------FLFLGPTGVGKT 555
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
+++ ALAE +FGN+ +I VD+S + + + + G+ + ++
Sbjct: 556 ELSKALAEALFGNEEDMIRVDMSEYMEKHSVSKMIGSPP-GYVGHEDGGQ-----LSEKV 609
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
R PYSV+ ++++K A P V + L + + G TDS GR V + + TS
Sbjct: 610 RRNPYSVILFDEIEK-AHPDVFNILLQVLDDGHITDSQGRKVDFRNTVIIMTSN 662
>gi|355574810|ref|ZP_09044446.1| ATP-dependent chaperone ClpB [Olsenella sp. oral taxon 809 str.
F0356]
gi|354818286|gb|EHF02778.1| ATP-dependent chaperone ClpB [Olsenella sp. oral taxon 809 str.
F0356]
Length = 872
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKK 740
+ L L E+V Q+EA+ ++ AV R R G R +GS FLGP VGK
Sbjct: 563 QNLEAELHERVIGQNEAVSAVASAVRRSRAGLADPNRPLGS-------FFFLGPTGVGKT 615
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++A ALAE +F ++ L+ +D +S+ F Q + G + +
Sbjct: 616 ELAKALAECLFDDERALVRID------MSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAV 669
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSV+ L++++K A P V + L + + G+ TD GR VS I + TS +
Sbjct: 670 RRKPYSVILLDEMEK-AHPDVFNILLQVLDDGRLTDGQGRVVSFKNTIIIMTSNV 723
>gi|296386957|ref|ZP_06876456.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PAb1]
gi|416874981|ref|ZP_11918474.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa 152504]
gi|334842534|gb|EGM21140.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa 152504]
Length = 932
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q EAI +S AV R G + S+ FLGP VGK ++A ALAE+
Sbjct: 590 LHQRVIGQQEAITAVSDAVRLARAG----LRQGSRPIATFLFLGPTGVGKTELAKALAEV 645
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
VFG++ +I +D+S + + G V D + + R +PYS
Sbjct: 646 VFGDEDAMIRIDMSEYMERHAVSRLIGAPP---------GYVGYDEGGQLTERVRRRPYS 696
Query: 807 VVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST-----ILKGKH 860
V+ L++++KA AD V + L + G+ TD GR V + I +ATS I+K
Sbjct: 697 VILLDEIEKAHAD--VNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQ 754
Query: 861 SVHPQTTPVKFSEEII 876
+ P K E++
Sbjct: 755 AGEFALPPEKLKRELM 770
>gi|326203327|ref|ZP_08193192.1| ATPase AAA-2 domain protein [Clostridium papyrosolvens DSM 2782]
gi|325986585|gb|EGD47416.1| ATPase AAA-2 domain protein [Clostridium papyrosolvens DSM 2782]
Length = 810
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 653 DAVSEGTFHNVVQS-SSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRW 711
D V+E ++V S + E R K + L ++V QDEA+ +IS+A+ R
Sbjct: 471 DTVTEDDIADIVASWTGIPVKRLAEEESERLLK-MEETLHKRVIGQDEAVKSISKAIRRG 529
Query: 712 RIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRV 768
R+G R VGS F+GP VGK ++ ALAE +FG++ +I VD+S
Sbjct: 530 RVGLKDPKRPVGS-------FIFMGPTGVGKTELCKALAEAMFGDEKSMIRVDMS----- 577
Query: 769 SQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFLEDLDKAADPIVQSSL 825
+ ++ G V D + + R +PYSV+ ++++K A P + + L
Sbjct: 578 ----EFMEKHSVSKLVGSPPGYVGYDEGGQLTERVRRRPYSVLLFDEIEK-AHPDIFNIL 632
Query: 826 TKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ + G+ TDS GR V I + TS +
Sbjct: 633 LQILEDGRLTDSQGRVVDFRNTIIIMTSNV 662
>gi|238855059|ref|ZP_04645387.1| negative regulator of genetic competence ClpC/mecB [Lactobacillus
jensenii 269-3]
gi|260664844|ref|ZP_05865695.1| ATP-dependent chaperone ClpB [Lactobacillus jensenii SJ-7A-US]
gi|238832303|gb|EEQ24612.1| negative regulator of genetic competence ClpC/mecB [Lactobacillus
jensenii 269-3]
gi|260561327|gb|EEX27300.1| ATP-dependent chaperone ClpB [Lactobacillus jensenii SJ-7A-US]
Length = 827
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D R L L ++V Q++AI +++A+ R R G GR +GS FLGP
Sbjct: 508 DTRKLINLEATLHKRVIGQNKAIQAVAKAIKRSRSGIKDEGRPIGS-------FLFLGPT 560
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LV 793
VGK ++A A+A VFG++ L+ +D+S D KL G V
Sbjct: 561 GVGKTELAKAVASAVFGSENNLVRIDMS---------EYMDT----IASSKLIGSAPGYV 607
Query: 794 DY-----IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
Y + ++ R PYSVV L++++K A P V + L + + G TDS GR V +
Sbjct: 608 GYEEGGQLSEQVRRHPYSVVLLDEVEK-AHPDVFNLLLQVLDDGFLTDSKGRKVDFRNTV 666
Query: 849 FVATSTI 855
+ TS +
Sbjct: 667 IIMTSNL 673
>gi|408355978|ref|YP_006844509.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Amphibacillus
xylanus NBRC 15112]
gi|407726749|dbj|BAM46747.1| ATP-dependent Clp protease ATP-binding subunit ClpE [Amphibacillus
xylanus NBRC 15112]
Length = 706
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 17/173 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
+ L + L+EKV Q+ A+ +++A+ R R G R +GS F+GP VGK
Sbjct: 410 RDLAVKLSEKVIGQNHAVNKVAKAIRRSRAGLKVATRPIGS-------FLFVGPTGVGKT 462
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++A LAE +FG + LI +D+S + I + + G+ + ++
Sbjct: 463 ELAKVLAEELFGTRDSLIRLDMSEYMERHSVSKIIGSPP-GYVGHEEAGQ-----LTEKV 516
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
R PYS++ L++++K A P VQ + + G TDS+GR VS + + TS
Sbjct: 517 RRNPYSLILLDEIEK-AHPDVQHMFLQIMEDGHLTDSHGRTVSFKDCVIIMTS 568
>gi|119358345|ref|YP_912989.1| ATPase [Chlorobium phaeobacteroides DSM 266]
gi|119355694|gb|ABL66565.1| ATPase AAA-2 domain protein [Chlorobium phaeobacteroides DSM 266]
Length = 440
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRD---VGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ +S+AV R R G G + +GS FLGP VGK ++A AL
Sbjct: 139 LHQRVIGQEEAVTAVSEAVKRSRAGMGDEKKPIGS-------FIFLGPTGVGKTELARAL 191
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +F N+ +I +D+ SE S S + + G+ + + R KP+S
Sbjct: 192 AEYLFDNEDSMIRIDM-SEYMESHTVSRLVGAPPGYVGYEEGGQ-----LTEAVRRKPFS 245
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TD+ G V+ I + TS I
Sbjct: 246 VVLLDEIEK-AHPDVFNILLQILDDGRLTDNKGHTVNFKNTIIIMTSNI 293
>gi|404485968|ref|ZP_11021162.1| hypothetical protein HMPREF9448_01587 [Barnesiella intestinihominis
YIT 11860]
gi|404337296|gb|EJZ63750.1| hypothetical protein HMPREF9448_01587 [Barnesiella intestinihominis
YIT 11860]
Length = 843
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++ QD+A+ I +A+ R R+G G+ +G+ FLGP VGK +A L
Sbjct: 536 LKREIIGQDDAVDKIVKAIQRNRVGLKDPGKPIGT-------FMFLGPTGVGKTHLAKKL 588
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE +F +K LI +D+S F +L G V Y + ++
Sbjct: 589 AEYLFDSKDALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEK 635
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++K A P V + L + + G+ TDS GR + I + TS I
Sbjct: 636 VRRKPYSVVLLDEIEK-AHPDVFNLLLQVLDEGRLTDSLGRRIDFKNTILIMTSNI 690
>gi|153940994|ref|YP_001392864.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. Langeland]
gi|384463825|ref|YP_005676420.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. 230613]
gi|152936890|gb|ABS42388.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. Langeland]
gi|295320842|gb|ADG01220.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. 230613]
Length = 811
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 93/189 (49%), Gaps = 35/189 (18%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EAI ++S++V R R+G R +GS FLGP VGK ++ AL
Sbjct: 508 LHNRVIGQEEAIKSVSRSVRRARVGLKDPKRPIGS-------FIFLGPTGVGKTELTKAL 560
Query: 747 AEIVFGNKGKLIHVDVS------SEQRV--SQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
AE +FGN+ +I VD+S S R+ S P I + G L D +
Sbjct: 561 AEAMFGNENNMIRVDMSEYMEKHSVSRLIGSPPGYIGHDE----------GGQLTDKV-- 608
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R+ PYSVV ++++K A P V + L + + G+ TD G+ V I + TS + G
Sbjct: 609 --RTNPYSVVLFDEIEK-AHPEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNV--G 663
Query: 859 KHSVHPQTT 867
++ Q T
Sbjct: 664 ASTISRQKT 672
>gi|440785432|ref|ZP_20962189.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium pasteurianum DSM 525]
gi|440218328|gb|ELP57550.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium pasteurianum DSM 525]
Length = 812
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 93/183 (50%), Gaps = 23/183 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ ++S+AV R R+G R +GS FLGP VGK +++ AL
Sbjct: 510 LHKRVIGQNEAVKSVSRAVRRARVGLKDPKRPIGS-------FIFLGPTGVGKTELSKAL 562
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKP 804
AE +FG++ +I +D+S + + + F D + ++ R KP
Sbjct: 563 AEAMFGDENSIIRIDMSEYMEKHTVSRLIGSPPGYVGFDDG--------GQLTEKVRRKP 614
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHP 864
YSVV ++++K A P V + L + + G+ TD G+ V+ I + TS + G ++
Sbjct: 615 YSVVLFDEIEK-AHPDVFNILLQILEDGRLTDGKGKTVNFRNTIIILTSNV--GASTIKK 671
Query: 865 QTT 867
Q +
Sbjct: 672 QKS 674
>gi|326792086|ref|YP_004309907.1| ATPase AAA [Clostridium lentocellum DSM 5427]
gi|326542850|gb|ADZ84709.1| ATPase AAA-2 domain protein [Clostridium lentocellum DSM 5427]
Length = 822
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 17/175 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K + L E+V Q+EAI +S+AV R R+G R +GS FLGP VGK
Sbjct: 507 KQMEKILHERVVGQEEAIVAVSKAVRRGRVGLKDPNRPIGS-------FMFLGPTGVGKT 559
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++ ALAE +FG++ ++ VD+S + + + + G+ + ++
Sbjct: 560 ELTKALAEAMFGDENAMVRVDMSEYMEKHTVSKMIGSPP-GYVGYEEGGQ-----LTEKV 613
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPY VV ++++KA + + L + + G TDS GR ++ I + TS I
Sbjct: 614 RRKPYCVVLFDEIEKAHGDVF-NILLQILDDGHITDSRGRRINFKNTIIIMTSNI 667
>gi|295840508|ref|ZP_06827441.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|295828024|gb|EDY43519.2| conserved hypothetical protein [Streptomyces sp. SPB74]
Length = 862
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V QDEA+ ++ AV R R G R +GS FLGP VGK ++A L
Sbjct: 546 LHARVIGQDEAVSAVADAVLRSRAGLSTGDRPIGS-------FLFLGPTGVGKTELARTL 598
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +++ +D+S Q + + + + G+ + + R PYS
Sbjct: 599 AEALFGSEDRMVRLDMSEYQERHTVSRLVGAPP-GYVGHEEAGQ-----LTEAVRRNPYS 652
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++ L++++K A P V + L + + G+ TDS GR V+ + + V TS +
Sbjct: 653 LLLLDEIEK-AHPDVFNILLQVLDDGRLTDSQGRTVNFTNTVIVMTSNL 700
>gi|332685809|ref|YP_004455583.1| ATP-dependent Clp protease, ATP-binding subunit ClpC/negative
regulator of genetic competence clcC/mecB [Melissococcus
plutonius ATCC 35311]
gi|332369818|dbj|BAK20774.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / negative
regulator of genetic competence clcC/mecB [Melissococcus
plutonius ATCC 35311]
Length = 829
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 518 LHKRVVGQNEAVKAVSKAIRRARSGLKDPKRPIGS-------FMFLGPTGVGKTELAKAL 570
Query: 747 AEIVFGNKGKLIHVDVS-------SEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQE 799
AE +FG++ LI VD+S + + V P + G L + I
Sbjct: 571 AEAMFGSEDALIRVDMSEFMERYNTSRLVGSPPGYVGYEE---------GGQLTEKI--- 618
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSVV L++++KA + + L + + G TDS GR + I + TS I
Sbjct: 619 -RQKPYSVVLLDEIEKAHTDVF-NMLLQVLDDGHLTDSKGRKIDFRNTIVIMTSNI 672
>gi|302385738|ref|YP_003821560.1| ATPase AAA-2 domain-containing protein [Clostridium saccharolyticum
WM1]
gi|302196366|gb|ADL03937.1| ATPase AAA-2 domain protein [Clostridium saccharolyticum WM1]
Length = 816
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 655 VSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG 714
V EG +VV S + E + + L L E+V Q+EA+ +S+A+ R R+G
Sbjct: 475 VDEGEIADVVSSWTKIPVRKLEEGESERLRNLETILHERVIGQEEAVTAVSKAIRRGRVG 534
Query: 715 ---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQP 771
R +GS FLGP VGK +++ AL+E +FG + LI VD+S
Sbjct: 535 LKDPKRPIGS-------FLFLGPTGVGKTELSKALSEAMFGTEHALIRVDMSEYMEKHSV 587
Query: 772 NSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAIST 831
+ + + G+ + ++ R PYSV+ ++++K A P V + L + +
Sbjct: 588 SKMIGSPP-GYIGYDEGGQ-----LSEKVRRNPYSVILFDEIEK-AHPDVFNILLQVLDD 640
Query: 832 GKFTDSYGRDVSISGMIFVATS 853
G TD+ GR + + + TS
Sbjct: 641 GHITDAQGRKIDFKNTVIIMTS 662
>gi|375255443|ref|YP_005014610.1| negative regulator of genetic competence ClpC/MecB [Tannerella
forsythia ATCC 43037]
gi|363406348|gb|AEW20034.1| negative regulator of genetic competence ClpC/MecB [Tannerella
forsythia ATCC 43037]
Length = 854
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 85/173 (49%), Gaps = 25/173 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L EK+ QDEA+ I +A+ R R+G +D N G ++ FLGP VGK +A LAE
Sbjct: 548 LKEKIIGQDEAVEKIVKAIQRNRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKKLAEF 603
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+F LI +D+S F +L G V Y + ++ R
Sbjct: 604 LFDTPDALIRIDMSEYLE-------------KFAVSRLIGAPPGYVGYEEGGQLTEKVRR 650
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYSVV L++++K A P V + L + + G+ TDS GR + I + TS I
Sbjct: 651 KPYSVVLLDEIEK-AHPDVFNLLLQVLDEGRLTDSLGRRIDFKNTILIMTSNI 702
>gi|212639808|ref|YP_002316328.1| ATP-dependent Clp protease-like protein [Anoxybacillus flavithermus
WK1]
gi|212561288|gb|ACJ34343.1| ATP-dependent Clp protease-like protein [Anoxybacillus flavithermus
WK1]
Length = 721
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 17/173 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LA+KV Q+EA+ I++A+ R R G R +GS F+GP VGK
Sbjct: 436 KHLEENLAKKVIGQEEAVRKIAKAIRRSRAGLKAKNRPIGS-------FLFVGPTGVGKT 488
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
+++ LAE +FG+ +I +D+S + + + + G+ + ++
Sbjct: 489 ELSKTLAEQLFGSTDAMIRLDMSEYMEKHAVSKLIGAPP-GYVGHEEAGQ-----LTEKV 542
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
R PYS++ L++++K A P VQ + + G+ TDS GR VS + + TS
Sbjct: 543 RRNPYSIILLDEMEK-AHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIIMTS 594
>gi|251799676|ref|YP_003014407.1| ATPase AAA [Paenibacillus sp. JDR-2]
gi|247547302|gb|ACT04321.1| ATPase AAA-2 domain protein [Paenibacillus sp. JDR-2]
Length = 817
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q++A+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHDRVIGQEDAVKAVSRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AEAMFGDENAVIRIDM-SEYMEKHSTSRLVGAPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIIMTSNV 660
>gi|15595656|ref|NP_249150.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa PAO1]
gi|9946319|gb|AAG03848.1|AE004483_6 probable ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa PAO1]
Length = 850
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q EAI +S AV R G + S+ FLGP VGK ++A ALAE+
Sbjct: 508 LHQRVIGQQEAITAVSDAVRLARAG----LRQGSRPIATFLFLGPTGVGKTELAKALAEV 563
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
VFG++ +I +D+S + + G V D + + R +PYS
Sbjct: 564 VFGDEDAMIRIDMS---------EYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYS 614
Query: 807 VVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST-----ILKGKH 860
V+ L++++KA AD V + L + G+ TD GR V + I +ATS I+K
Sbjct: 615 VILLDEIEKAHAD--VNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQ 672
Query: 861 SVHPQTTPVKFSEEII 876
+ P K E++
Sbjct: 673 AGEFAQPPEKLKRELM 688
>gi|421165326|ref|ZP_15623661.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa ATCC
700888]
gi|404542185|gb|EKA51515.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa ATCC
700888]
Length = 850
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q EAI +S AV R G + S+ FLGP VGK ++A ALAE+
Sbjct: 508 LHQRVIGQQEAITAVSDAVRLARAG----LRQGSRPIATFLFLGPTGVGKTELAKALAEV 563
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
VFG++ +I +D+S + + G V D + + R +PYS
Sbjct: 564 VFGDEDAMIRIDMS---------EYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYS 614
Query: 807 VVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST-----ILKGKH 860
V+ L++++KA AD V + L + G+ TD GR V + I +ATS I+K
Sbjct: 615 VILLDEIEKAHAD--VNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQ 672
Query: 861 SVHPQTTPVKFSEEII 876
+ P K E++
Sbjct: 673 AGEFAQPPEKLKRELM 688
>gi|254237311|ref|ZP_04930634.1| hypothetical protein PACG_03381 [Pseudomonas aeruginosa C3719]
gi|126169242|gb|EAZ54753.1| hypothetical protein PACG_03381 [Pseudomonas aeruginosa C3719]
Length = 850
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q EAI +S AV R G + S+ FLGP VGK ++A ALAE+
Sbjct: 508 LHQRVIGQQEAITAVSDAVRLARAG----LRQGSRPIATFLFLGPTGVGKTELAKALAEV 563
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
VFG++ +I +D+S + + G V D + + R +PYS
Sbjct: 564 VFGDEDAMIRIDMS---------EYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYS 614
Query: 807 VVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST-----ILKGKH 860
V+ L++++KA AD V + L + G+ TD GR V + I +ATS I+K
Sbjct: 615 VILLDEIEKAHAD--VNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQ 672
Query: 861 SVHPQTTPVKFSEEII 876
+ P K E++
Sbjct: 673 AGEFAQPPEKLKRELM 688
>gi|163848669|ref|YP_001636713.1| ATP-dependent chaperone ClpB [Chloroflexus aurantiacus J-10-fl]
gi|222526605|ref|YP_002571076.1| ATP-dependent chaperone ClpB [Chloroflexus sp. Y-400-fl]
gi|163669958|gb|ABY36324.1| ATP-dependent chaperone ClpB [Chloroflexus aurantiacus J-10-fl]
gi|222450484|gb|ACM54750.1| ATP-dependent chaperone ClpB [Chloroflexus sp. Y-400-fl]
Length = 861
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 23/172 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +S AV R R G R +GS FLGP VGK ++A AL
Sbjct: 568 LHQRVVGQDEAVIAVSNAVRRARAGLQDPNRPLGS-------FLFLGPTGVGKTELARAL 620
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE +F ++ +I +D+S + ++ G V D + + R K
Sbjct: 621 AEFLFDDEQAMIRIDMS---------EYMEKHSVARLIGAPPGYVGYDEGGQLTEAVRRK 671
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSVV ++++K A P V + L + + G+ TD GR V+ + + TS I
Sbjct: 672 PYSVVLFDEIEK-AHPDVFNVLLQVLDDGRLTDGQGRIVNFKNTVIIMTSNI 722
>gi|78187896|ref|YP_375939.1| ATPase [Chlorobium luteolum DSM 273]
gi|78167798|gb|ABB24896.1| ATPase [Chlorobium luteolum DSM 273]
Length = 441
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +S+AV R R G G R +GS FLGP VGK ++A L
Sbjct: 139 LHERVIGQDEAVRAVSEAVKRSRAGMGDEKRPIGS-------FIFLGPTGVGKTELARTL 191
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
A+ +F ++ +I +D+ SE S S + + G+ + + R KP+S
Sbjct: 192 ADYLFDDEDAMIRIDM-SEYMESHTVSRLVGAPPGYVGYEEGGQ-----LTEAVRRKPFS 245
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS G V+ I + TS I
Sbjct: 246 VVLLDEIEK-AHPDVFNILLQILDDGRLTDSKGHTVNFKNTIIIMTSNI 293
>gi|410461714|ref|ZP_11315360.1| Class III stress response-related ATPase, ClpC [Bacillus
azotoformans LMG 9581]
gi|409925481|gb|EKN62692.1| Class III stress response-related ATPase, ClpC [Bacillus
azotoformans LMG 9581]
Length = 807
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ I++A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 508 LHSRVIGQEEAVKAIAKAIRRARSGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 560
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ LI +D+ SE S + + G+ + ++ R KP+S
Sbjct: 561 AEAMFGDEDALIRIDM-SEYMEKHTTSRLVGSPPGYVGHEEGGQ-----LTEKVRRKPFS 614
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TDS GR V I + TS +
Sbjct: 615 VILLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNV 662
>gi|153813279|ref|ZP_01965947.1| hypothetical protein RUMOBE_03696 [Ruminococcus obeum ATCC 29174]
gi|149830692|gb|EDM85783.1| ATPase family associated with various cellular activities (AAA)
[Ruminococcus obeum ATCC 29174]
Length = 708
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 23/172 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ ++QAV R R+G R +GS FLGP VGK +++ AL
Sbjct: 402 LHKRVIGQEEAVKAVAQAVKRGRVGLKDPNRPIGS-------FLFLGPTGVGKTELSKAL 454
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE VFG++ +I VD+S + ++ G V D + ++ R
Sbjct: 455 AEAVFGSEQAMIRVDMS---------EYMEKHSVSKMIGSPPGYVGYDEGGQLSEKVRRN 505
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSV+ ++++K A P V + L + + G TD++GR V I + TS +
Sbjct: 506 PYSVLLFDEIEK-AHPDVFNILLQVLDDGHITDAHGRKVDFKQTIIIMTSNV 556
>gi|421178370|ref|ZP_15635984.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa E2]
gi|404548424|gb|EKA57375.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa E2]
Length = 850
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q EAI +S AV R G + S+ FLGP VGK ++A ALAE+
Sbjct: 508 LHQRVIGQQEAITAVSDAVRLARAG----LRQGSRPIATFLFLGPTGVGKTELAKALAEV 563
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
VFG++ +I +D+S + + G V D + + R +PYS
Sbjct: 564 VFGDEDAMIRIDMS---------EYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYS 614
Query: 807 VVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST-----ILKGKH 860
V+ L++++KA AD V + L + G+ TD GR V + I +ATS I+K
Sbjct: 615 VILLDEIEKAHAD--VNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQ 672
Query: 861 SVHPQTTPVKFSEEII 876
+ P K E++
Sbjct: 673 AGEFAQPPEKLKRELM 688
>gi|315649734|ref|ZP_07902818.1| ATPase AAA-2 domain protein [Paenibacillus vortex V453]
gi|315274922|gb|EFU38298.1| ATPase AAA-2 domain protein [Paenibacillus vortex V453]
Length = 818
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 19/181 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +S+AV R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHSRVIGQEEAVKAVSRAVRRARAGLKDPKRPMGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ ++ +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AEAMFGDENAVVRIDM-SEYMEKHSTSRLVGAPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
VV L++++K A P V + L + + G+ TDS GR V + + TS + G ++ +
Sbjct: 613 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNV--GAEAIKKNS 669
Query: 867 T 867
T
Sbjct: 670 T 670
>gi|32475713|ref|NP_868707.1| ClpB protein [Rhodopirellula baltica SH 1]
gi|32446255|emb|CAD76084.1| ClpB protein [Rhodopirellula baltica SH 1]
Length = 899
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +S AV R R G R +GS FLGP VGK ++ AL
Sbjct: 607 LHQRVVGQDEAVTAVSDAVRRSRSGLQDPNRPIGS-------FLFLGPTGVGKTELCKAL 659
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE++F ++ ++ +D+S + + + + GK + + R +PY+
Sbjct: 660 AEVMFDDESAMVRIDMSEFMERHSVSRLIGAPP-GYVGYEEGGK-----LTEAVRRRPYA 713
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TD GR V+ + + V TS +
Sbjct: 714 VILLDEMEK-AHPDVFNVLLQVLDDGRLTDGQGRTVNFTNTVVVMTSNV 761
>gi|319796154|ref|YP_004157794.1| type VI secretion ATPase, clpv1 family [Variovorax paradoxus EPS]
gi|315598617|gb|ADU39683.1| type VI secretion ATPase, ClpV1 family [Variovorax paradoxus EPS]
Length = 906
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 681 RDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKK 740
+ + L LAE+V QD A+ ++Q R R + R N RG+++ F+GP VGK
Sbjct: 596 KTVRALDTLLAERVIGQDHALAAVAQ---RVRTASARLEDPNKPRGVFM-FVGPSGVGKT 651
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
+ A ALA+I++G + KLI +++S Q + G + +
Sbjct: 652 ETALALADILYGGEKKLITINMSEYQEA------HSVSGLKGSPPGYVGYGEGGVLTEAV 705
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R +PYSVV L++++K A P V + G D+ GR++ + + TS I
Sbjct: 706 RRQPYSVVLLDEVEK-AHPDVLEMFFQVFDKGMMDDAEGREIDFRNTLIILTSNI 759
>gi|254586201|ref|XP_002498668.1| ZYRO0G15818p [Zygosaccharomyces rouxii]
gi|238941562|emb|CAR29735.1| ZYRO0G15818p [Zygosaccharomyces rouxii]
Length = 810
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 102/241 (42%), Gaps = 33/241 (13%)
Query: 660 FHNVVQSSSCS---APHTGEPF------DPRDYKTLRIALAEKVGWQDEAICTISQAVSR 710
H+ V S S A TG P D + +L E+V QDEAI IS AV
Sbjct: 462 LHDSVSSDDISKVIAKMTGIPVQTVLKGDKDRLLYMENSLKERVVGQDEAIRAISDAVRL 521
Query: 711 WRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVS 769
R G ++ KR I FLGP GK ++ ALAE +F N+ +I D+S Q
Sbjct: 522 QRAG-----LTSEKRPIASFMFLGPTGTGKTELTKALAEFLFDNESNVIRFDMSEFQEKH 576
Query: 770 QPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLT 826
+ + G V+ + + + R KPYSVV ++ +KA P V L
Sbjct: 577 TVSRLIGAPP---------GYVMSESGGQLTEAVRRKPYSVVLFDEFEKAH-PDVCKILL 626
Query: 827 KAISTGKFTDSYGRDVSISGMIFVATSTI-----LKGKHSVHPQTTPVKFSEEIILGAKR 881
+ + GK TDS G V I V TS + L +H+ T + ++I KR
Sbjct: 627 QVLDEGKLTDSQGHVVDFRNTIIVMTSNVGQDILLTDEHASEDGTVSKEVKTKVIEAMKR 686
Query: 882 W 882
Sbjct: 687 L 687
>gi|116054188|ref|YP_788632.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa
UCBPP-PA14]
gi|421172222|ref|ZP_15629998.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa CI27]
gi|115589409|gb|ABJ15424.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa UCBPP-PA14]
gi|404538083|gb|EKA47640.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa CI27]
Length = 850
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q EAI +S AV R G + S+ FLGP VGK ++A ALAE+
Sbjct: 508 LHQRVIGQQEAITAVSDAVRLARAG----LRQGSRPIATFLFLGPTGVGKTELAKALAEV 563
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
VFG++ +I +D+S + + G V D + + R +PYS
Sbjct: 564 VFGDEDAMIRIDMS---------EYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYS 614
Query: 807 VVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST-----ILKGKH 860
V+ L++++KA AD V + L + G+ TD GR V + I +ATS I+K
Sbjct: 615 VILLDEIEKAHAD--VNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQ 672
Query: 861 SVHPQTTPVKFSEEII 876
+ P K E++
Sbjct: 673 AGEFAQPPEKLKRELM 688
>gi|407276252|ref|ZP_11104722.1| ATP-binding subunit of heat shock protein ClpB [Rhodococcus sp.
P14]
Length = 851
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKK 741
K LR+ L ++V QDEA+ +S AV R R G N G +L FLGP VGK +
Sbjct: 562 KLLRMESELGKRVVGQDEAVQAVSDAVRRSRAGV---ADPNRPTGSFL-FLGPTGVGKTE 617
Query: 742 IASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNI--DFCDCKLRGKVLVDYIYQE 799
+A ALA+ +F ++ ++ +D+S S+ +S+ + + G+ + +
Sbjct: 618 LAKALADFLFDDERAMVRIDMSE---YSEKHSVARLVGAPPGYVGYESGGQ-----LTEA 669
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
R +PYSVV ++++K A P V +L + + G+ TD GR V I + TS + G
Sbjct: 670 VRRRPYSVVLFDEVEK-AHPDVFDTLLQVLDDGRLTDGQGRTVDFRNTILILTSNLGAGG 728
Query: 860 HSVH 863
H
Sbjct: 729 DREH 732
>gi|406965189|gb|EKD90849.1| ATP-dependent Clp protease ATP-binding subunit ClpB, partial
[uncultured bacterium]
Length = 202
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 702 CTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAEIVFGNKGKLIHV 760
+S+AV R RIG +N+ R I FLGP GK ++A LAEI+FG K +I +
Sbjct: 1 MAVSEAVRRGRIGL-----ANANRPIASFIFLGPTGTGKTELAKVLAEIMFGRKDAMIRL 55
Query: 761 DVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPI 820
D+S + + + + G+ + + RSKPYS+V L++++K A P
Sbjct: 56 DMSEYMEKHEVAKLVGAPP-GYVGYEEGGQ-----LTEAVRSKPYSIVLLDEIEK-AHPD 108
Query: 821 VQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V + L + + G+ TD+ G VS + VATS I
Sbjct: 109 VFNILLQLLEDGRLTDNKGNTVSFKNTVIVATSNI 143
>gi|344303208|gb|EGW33482.1| hypothetical protein SPAPADRAFT_60830 [Spathaspora passalidarum
NRRL Y-27907]
Length = 543
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 17/173 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASA 745
+ I L +KV QDEAI +++ AV R G + S+ + F+GP GK ++ A
Sbjct: 228 MEIILKQKVVGQDEAIHSVADAVRLQRAG----LTSDRRPIASFMFMGPTGTGKTELTKA 283
Query: 746 LAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSK 803
LAE +F +K +I D+S Q + + + + D G+ + + R K
Sbjct: 284 LAEFLFNDKSSVIRFDMSEFQERHTVSRLIGSPPGYVGYEDS---GE-----LTEAVRRK 335
Query: 804 PYSVVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
PYSVV ++ +KA AD V L + + GK TDS+G+ V I V TS I
Sbjct: 336 PYSVVLFDEFEKAHAD--VSKLLLQVLDEGKLTDSHGKHVDFRNTIIVMTSNI 386
>gi|218889199|ref|YP_002438063.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa LESB58]
gi|218769422|emb|CAW25182.1| probable ClpA/B protease ATP binding subunit [Pseudomonas
aeruginosa LESB58]
Length = 850
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q EAI +S AV R G + S+ FLGP VGK ++A ALAE+
Sbjct: 508 LHQRVIGQQEAITAVSDAVRLARAG----LRQGSRPIATFLFLGPTGVGKTELAKALAEV 563
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
VFG++ +I +D+S + + G V D + + R +PYS
Sbjct: 564 VFGDEDAMIRIDMS---------EYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPYS 614
Query: 807 VVFLEDLDKA-ADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST-----ILKGKH 860
V+ L++++KA AD V + L + G+ TD GR V + I +ATS I+K
Sbjct: 615 VILLDEIEKAHAD--VNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNAQ 672
Query: 861 SVHPQTTPVKFSEEII 876
+ P K E++
Sbjct: 673 AGEFAQPPEKLKRELM 688
>gi|149181371|ref|ZP_01859868.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
sp. SG-1]
gi|148850934|gb|EDL65087.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus
sp. SG-1]
Length = 700
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 17/242 (7%)
Query: 639 NKEQCFSGSISAEFDAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQD 698
N E+ E V+ H +V+ + + + + L+ L +V QD
Sbjct: 361 NLEKALESQEDKELPVVNPQLIHELVEKKTGIPVGKLQEDEQKKMNELQSNLNSQVIGQD 420
Query: 699 EAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKG 755
EA+ T+S+A+ R R G R +GS F+GP VGK +++ LA+ +FG
Sbjct: 421 EAVKTVSKAIRRSRAGLKNRNRPIGS-------FLFIGPTGVGKTELSKTLAQELFGTAE 473
Query: 756 KLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDK 815
+I +D+S + +SI + G + ++ R PYS++ L++++K
Sbjct: 474 AMIRLDMSE---YMEKHSI---SKLIGSPPGYVGHEEAGQLSEKVRRNPYSIILLDEIEK 527
Query: 816 AADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPVKFSEEI 875
A P VQ + + G+ TDS GR VS + + TS G H T E
Sbjct: 528 -AHPDVQHMFLQILEDGRLTDSQGRTVSFKDSVIIMTSNAGVGFKEKHVGFTSHTMKETS 586
Query: 876 IL 877
IL
Sbjct: 587 IL 588
>gi|154503279|ref|ZP_02040339.1| hypothetical protein RUMGNA_01103 [Ruminococcus gnavus ATCC 29149]
gi|336432911|ref|ZP_08612741.1| hypothetical protein HMPREF0991_01860 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153796273|gb|EDN78693.1| ATPase family associated with various cellular activities (AAA)
[Ruminococcus gnavus ATCC 29149]
gi|336017581|gb|EGN47339.1| hypothetical protein HMPREF0991_01860 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 813
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 19/179 (10%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D + L L ++V Q+EA+ +++AV R R+G R +GS FLGP
Sbjct: 497 DAHRLQKLEETLHKRVIGQEEAVSAVTRAVKRGRVGLKSPNRPIGS-------FLFLGPT 549
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSS-EQRVSQPNSIFDCQNIDFCDCKLRGKVLVD 794
VGK +++ ALAE +FG + +I VD+S ++ S I D G L D
Sbjct: 550 GVGKTELSKALAEALFGREDSMIRVDMSEYMEKHSVAKMIGSPPGYVGHD---EGGQLSD 606
Query: 795 YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+ R+ PYSV+ ++++K A P V + L + + G+ TDS GR V S + + TS
Sbjct: 607 KV----RTHPYSVILFDEIEK-AHPDVFNILLQVLDDGRITDSQGRVVDFSNTVIIMTS 660
>gi|395212959|ref|ZP_10400037.1| ATP-dependent chaperone clpb [Pontibacter sp. BAB1700]
gi|394456926|gb|EJF11144.1| ATP-dependent chaperone clpb [Pontibacter sp. BAB1700]
Length = 871
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 21/178 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L +V Q+EAI IS AV R R G + KR I FLG VGK ++A ALA+
Sbjct: 565 LGRRVAGQEEAIEAISDAVRRSRAGM-----QDPKRPIGSFIFLGTTGVGKTELAKALAD 619
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPY 805
+F ++ ++ +D+S Q + + G V D + + R KPY
Sbjct: 620 YLFNDENAMVRIDMSEYQERHAVSRMIGAPP---------GYVGYDEGGQLTEAVRRKPY 670
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVH 863
SVV L++++K A P V + L + + G+ TDS GR V+ I + TS I G H +
Sbjct: 671 SVVLLDEIEK-AHPDVFNILLQVLDDGRLTDSKGRVVNFKNTIIIMTSNI--GSHIIQ 725
>gi|449137906|ref|ZP_21773213.1| protein disaggregation chaperone [Rhodopirellula europaea 6C]
gi|448883488|gb|EMB14014.1| protein disaggregation chaperone [Rhodopirellula europaea 6C]
Length = 881
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +S AV R R G R +GS FLGP VGK ++ AL
Sbjct: 589 LHQRVVGQDEAVTAVSDAVRRSRSGLQDPNRPIGS-------FLFLGPTGVGKTELCKAL 641
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE++F ++ ++ +D+S + + + + GK + + R +PY+
Sbjct: 642 AEVMFDDESAMVRIDMSEFMERHSVSRLIGAPP-GYVGYEEGGK-----LTEAVRRRPYA 695
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TD GR V+ + + V TS +
Sbjct: 696 VILLDEMEK-AHPDVFNVLLQVLDDGRLTDGQGRTVNFTNTVVVMTSNV 743
>gi|404475279|ref|YP_006706710.1| hemolysin B [Brachyspira pilosicoli B2904]
gi|404436768|gb|AFR69962.1| hemolysin B [Brachyspira pilosicoli B2904]
Length = 834
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 25/173 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L K+ Q EAI +IS+A+ R R G + S K FLGP VGK +A L+E
Sbjct: 518 LHSKIVGQKEAISSISKAIRRARAG----LKSTKKPLGSFIFLGPTGVGKTALAKVLSEF 573
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRG-------KVLVDYIYQEFRS 802
+FG+ LI +D+S F +L G + ++ R
Sbjct: 574 MFGDSDALIRIDMSEFME-------------KFAVSRLIGAPPGYVGYEEGGGLTEKVRR 620
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYS++ ++++KA P + + L + + G+ TD++GR V S I + TS +
Sbjct: 621 KPYSLILFDEIEKAH-PDITNILLQVLEEGQLTDNFGRKVDFSNTIIIITSNL 672
>gi|296084461|emb|CBI25020.3| unnamed protein product [Vitis vinifera]
Length = 781
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 61/106 (57%), Gaps = 11/106 (10%)
Query: 1 MRTLVTLARQCLSEESARVLDDAVGVARQRRHSQTTSLHVVSALLCVPSSLLREACDRVQ 60
MR V +Q L+ ++A ++ AV +AR+R H+Q T LHV S +L S LLR AC R
Sbjct: 1 MRAGVCSVQQVLTADAASMVKQAVTLARRRGHAQVTPLHVASVMLASSSGLLRSACLRSH 60
Query: 61 SYSVSPKLQFRALELCLGVAFDRLPSSKSVEF-------PPISNSL 99
S+ LQ +ALELC VA +RLP+S S P +SN+L
Sbjct: 61 SHP----LQCKALELCFNVALNRLPASSSSPLLAPHSSHPSLSNAL 102
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 21/185 (11%)
Query: 678 FDPRDYKTLRI---ALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNS------KRGIW 728
F + + LRI AL +V WQ + I I+ + R G R G N K W
Sbjct: 526 FKELNAENLRILCNALERRVPWQKDIIPEIASTILECRSGTLR--GKNKLKQREDKEETW 583
Query: 729 LAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLR 788
L FLG D GK KIA +A++VFG++ K I + +SS ++ DF + R
Sbjct: 584 LLFLGVDFQGKDKIAREIAKLVFGSQSKFISIGLSSLGSTRADST------EDFLSKQAR 637
Query: 789 GKVLVDYI---YQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSIS 845
+ + YI + P+ V F+ED+++ D Q + + I +G+ + G S+
Sbjct: 638 DEPVGSYIEKFAEAVHENPHRVFFIEDVEQ-LDYSSQMGVKRGIESGRIQIAGGEAFSLE 696
Query: 846 GMIFV 850
I +
Sbjct: 697 DAIII 701
>gi|388369|gb|AAC37362.1| heat shock protein 78 [Saccharomyces cerevisiae]
Length = 811
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 689 ALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALA 747
+L E+V QDEAI IS AV R G ++ KR I FLGP GK K+ ALA
Sbjct: 501 SLKERVVGQDEAIAAISDAVRLQRAG-----LTSEKRPIASFMFLGPTGTGKTKLTKALA 555
Query: 748 EIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKP 804
E +F ++ +I D+S Q + + G VL + + + R KP
Sbjct: 556 EFLFDDESNVIRFDMSEFQEKHTVSRLIGAPP---------GYVLSESGGQLTEAVRRKP 606
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
Y VV ++ +KA P V L + + GK TDS G V I V TS I
Sbjct: 607 YPVVLFDEFEKAH-PDVSKLLLQVLDEGKLTDSLGHHVDFRNTIIVMTSNI 656
>gi|456388212|gb|EMF53702.1| ATP-dependent chaperone ClpB [Streptomyces bottropensis ATCC 25435]
Length = 859
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 21/175 (12%)
Query: 688 IALAEK----VGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
+ LAE+ V QDEA+ ++ AV R R G GR +GS FLGP VGK
Sbjct: 544 LGLAERLRGRVVGQDEAVDAVADAVLRSRAGLAGPGRPIGS-------FLFLGPTGVGKT 596
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++A ALAE +FG + +++ +D+S Q + + + + G+ + +
Sbjct: 597 ELARALAEALFGAEDRMVRLDMSEYQERHTVSRLVGAPP-GYVGHEAAGQ-----LTETV 650
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R PY+++ L++++K A P V + L + + G+ TD+ GR V + + V TS +
Sbjct: 651 RRHPYALLLLDEVEK-AHPDVFNLLLQVLDDGRLTDAQGRTVDFTHTVIVMTSNL 704
>gi|256826525|ref|YP_003150484.1| ATP-dependent chaperone ClpB [Cryptobacterium curtum DSM 15641]
gi|256582668|gb|ACU93802.1| ATP-dependent chaperone ClpB [Cryptobacterium curtum DSM 15641]
Length = 871
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ ++ A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 568 LHERVVGQDEAVSAVAGAIRRNRAGLSDPDRPIGS-------FLFLGPTGVGKTELAKAL 620
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +F + ++ +D +S+ F Q + G + + R +PYS
Sbjct: 621 AEYLFDTERAMVRID------MSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRRPYS 674
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TD GR VS I + TS +
Sbjct: 675 VILLDEIEK-AHPDVFNILLQVLDDGRLTDGQGRVVSFKNAIIIMTSNV 722
>gi|431807833|ref|YP_007234731.1| hemolysin B [Brachyspira pilosicoli P43/6/78]
gi|434381418|ref|YP_006703201.1| hemolysin B [Brachyspira pilosicoli WesB]
gi|404430067|emb|CCG56113.1| hemolysin B [Brachyspira pilosicoli WesB]
gi|430781192|gb|AGA66476.1| hemolysin B [Brachyspira pilosicoli P43/6/78]
Length = 834
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 25/173 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L K+ Q EAI +IS+A+ R R G + S K FLGP VGK +A L+E
Sbjct: 518 LHSKIVGQKEAISSISKAIRRARAG----LKSTKKPLGSFIFLGPTGVGKTALAKVLSEF 573
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRG-------KVLVDYIYQEFRS 802
+FG+ LI +D+S F +L G + ++ R
Sbjct: 574 MFGDSDALIRIDMSEFME-------------KFAVSRLIGAPPGYVGYEEGGGLTEKVRR 620
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYS++ ++++KA P + + L + + G+ TD++GR V S I + TS +
Sbjct: 621 KPYSLILFDEIEKAH-PDITNILLQVLEEGQLTDNFGRKVDFSNTIIIITSNL 672
>gi|329929240|ref|ZP_08282999.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF5]
gi|328936799|gb|EGG33238.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF5]
Length = 818
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 19/181 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +S+AV R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHSRVIGQEEAVKAVSRAVRRARAGLKDPKRPMGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ ++ +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AEAMFGDENAVVRIDM-SEYMEKHSTSRLVGAPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
VV L++++K A P V + L + + G+ TDS GR V + + TS + G ++ +
Sbjct: 613 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNV--GAEAIKKNS 669
Query: 867 T 867
T
Sbjct: 670 T 670
>gi|300871410|ref|YP_003786283.1| hemolysin B [Brachyspira pilosicoli 95/1000]
gi|300689111|gb|ADK31782.1| hemolysin B [Brachyspira pilosicoli 95/1000]
Length = 815
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 25/173 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L K+ Q EAI +IS+A+ R R G + S K FLGP VGK +A L+E
Sbjct: 499 LHSKIVGQKEAISSISKAIRRARAG----LKSTKKPLGSFIFLGPTGVGKTALAKVLSEF 554
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRG-------KVLVDYIYQEFRS 802
+FG+ LI +D+S F +L G + ++ R
Sbjct: 555 MFGDSDALIRIDMSEFME-------------KFAVSRLIGAPPGYVGYEEGGGLTEKVRR 601
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYS++ ++++KA P + + L + + G+ TD++GR V S I + TS +
Sbjct: 602 KPYSLILFDEIEKAH-PDITNILLQVLEEGQLTDNFGRKVDFSNTIIIITSNL 653
>gi|261409551|ref|YP_003245792.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. Y412MC10]
gi|261286014|gb|ACX67985.1| ATPase AAA-2 domain protein [Paenibacillus sp. Y412MC10]
Length = 818
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 19/181 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EA+ +S+AV R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHSRVIGQEEAVKAVSRAVRRARAGLKDPKRPMGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ ++ +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AEAMFGDENAVVRIDM-SEYMEKHSTSRLVGAPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
VV L++++K A P V + L + + G+ TDS GR V + + TS + G ++ +
Sbjct: 613 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNV--GAEAIKKNS 669
Query: 867 T 867
T
Sbjct: 670 T 670
>gi|126657055|ref|ZP_01728226.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp.
CCY0110]
gi|126621598|gb|EAZ92308.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp.
CCY0110]
Length = 788
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L E++ Q+ A+ +S+AV R RIG N KR I F GP VGK ++ ALA+
Sbjct: 473 LHERIIGQENAVKAVSKAVRRSRIGL-----QNPKRPIASFIFAGPTGVGKTELTKALAQ 527
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVV 808
+FG+K +I +D+S + + F + G+ + + R KPYSVV
Sbjct: 528 FLFGSKDAMIRLDMSEYMERHTVSKLIGTAP-GFIGYEEGGQ-----LTEAVRRKPYSVV 581
Query: 809 FLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 582 LFDEIEK-AHPDVFNLLLQLLEDGRLTDSKGRTVDFRNTLIIMTSNL 627
>gi|54035806|sp|Q7UM33.2|CLPB_RHOBA RecName: Full=Chaperone protein ClpB
Length = 881
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +S AV R R G R +GS FLGP VGK ++ AL
Sbjct: 589 LHQRVVGQDEAVTAVSDAVRRSRSGLQDPNRPIGS-------FLFLGPTGVGKTELCKAL 641
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE++F ++ ++ +D+S + + + + GK + + R +PY+
Sbjct: 642 AEVMFDDESAMVRIDMSEFMERHSVSRLIGAPP-GYVGYEEGGK-----LTEAVRRRPYA 695
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TD GR V+ + + V TS +
Sbjct: 696 VILLDEMEK-AHPDVFNVLLQVLDDGRLTDGQGRTVNFTNTVVVMTSNV 743
>gi|420143743|ref|ZP_14651240.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae IPLA 31405]
gi|391856614|gb|EIT67154.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae IPLA 31405]
Length = 816
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EAI +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 515 LHKRVVGQEEAISAVSRAIRRARSGIADTRRPLGS-------FMFLGPTGVGKTELAKAL 567
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE VFG++ +I VD+S F +L G V Y + ++
Sbjct: 568 AESVFGSEENMIRVDMSEFME-------------KFSTSRLIGAPPGYVGYDEGGQLTEQ 614
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R+KPYSV+ L++++K A P + + + + + G TD+ GR V I + TS +
Sbjct: 615 VRNKPYSVILLDEVEK-AHPDIFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|386774044|ref|ZP_10096422.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium paraconglomeratum LC44]
Length = 862
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V QDEAI IS+A+ R R G + + G F GP VGK ++A ALAE
Sbjct: 510 LHKRVIGQDEAIKAISRAIRRTRAG----LKDPKRPGGSFIFAGPTGVGKTELAKALAEF 565
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
+FG++ LI +D+S + +F G V D + ++ R KP+S
Sbjct: 566 LFGDEEALIQLDMSEFGEKHTASRLFGSPP---------GYVGYDEGGQLTEKVRRKPFS 616
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++KA I +SL + + G+ TDS GR V I + T+ +
Sbjct: 617 VVLFDEVEKAHVDIF-NSLLQILEDGRLTDSQGRVVDFKNTIIIMTTNL 664
>gi|260437887|ref|ZP_05791703.1| negative regulator of genetic competence ClpC/MecB [Butyrivibrio
crossotus DSM 2876]
gi|292809637|gb|EFF68842.1| negative regulator of genetic competence ClpC/MecB [Butyrivibrio
crossotus DSM 2876]
Length = 815
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 17/171 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L E+V QDEA+ +I++A+ R R+G R +GS FLGP VGK ++
Sbjct: 507 LEETLHERVVGQDEAVTSIARAIRRGRVGLKDPKRPIGS-------FLFLGPTGVGKTEL 559
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
+ LA+ +FGN+ LI VD+S + + + + G+ + ++ R
Sbjct: 560 SKTLADAMFGNENSLIRVDMSEYMEKHSVSKMIGSPP-GYVGYEEGGQ-----LSEKVRR 613
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
PYSV+ ++++K A P V + L + + G TDS GR V I + TS
Sbjct: 614 NPYSVILFDEIEK-AHPDVFNVLLQILDDGVVTDSSGRKVDFKNTIIIMTS 663
>gi|160901847|ref|YP_001567428.1| ATPase [Petrotoga mobilis SJ95]
gi|160359491|gb|ABX31105.1| ATPase AAA-2 domain protein [Petrotoga mobilis SJ95]
Length = 830
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 35/220 (15%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKR--GIWLAFLGPDKVGKKKIA 743
L L E+V QDEAI ++++A+ R R G + +R G+++ FLGP VGK ++A
Sbjct: 508 LEAVLHERVVGQDEAIKSVAKAIRRARSGL-----KDPRRPTGVFM-FLGPTGVGKTELA 561
Query: 744 SALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----I 796
LA +FGN+ L+ +D+S F +L G V Y +
Sbjct: 562 KTLATYLFGNETHLVRIDMSEYME-------------KFSVSRLVGAPPGYVGYDEGGQL 608
Query: 797 YQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTIL 856
+ R +PYSV+ L++++KA V + L + + G+ TDS GR V I + TS +
Sbjct: 609 TEIVRRRPYSVILLDEIEKAHTD-VYNILLQIMDEGRLTDSQGRTVDFRNTIIIMTSNL- 666
Query: 857 KGKHSVHPQTTPVKFSEEIILGAK----RWQMQTAISHGF 892
G + + F EE + ++ + Q+ +A+ F
Sbjct: 667 -GSEQISKTKRSLGFVEEGTIESEYKDIKEQVMSAVKAAF 705
>gi|50294636|ref|XP_449729.1| hypothetical protein [Candida glabrata CBS 138]
gi|49529043|emb|CAG62705.1| unnamed protein product [Candida glabrata]
Length = 787
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 96/221 (43%), Gaps = 28/221 (12%)
Query: 648 ISAEFDAVSEGTFHNVVQSSSCS---APHTGEPF------DPRDYKTLRIALAEKVGWQD 698
+S D+ E H+ V S S A TG P D + +L E+V QD
Sbjct: 427 LSETKDSNKENLLHDAVTSDDISKVIAKMTGIPMETVLKGDKDRLLYMENSLRERVVGQD 486
Query: 699 EAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAEIVFGNKGKL 757
EAI +S AV R G ++ KR I FLGP GK ++ ALAE +F ++ +
Sbjct: 487 EAIEAVSDAVRLQRAGL-----TSEKRPIASFMFLGPTGTGKTELTKALAEFLFDDESNV 541
Query: 758 IHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFLEDLD 814
I D+S Q + + G VL + + + R KPY+VV ++ +
Sbjct: 542 IRFDMSEFQEKHTVSKLIGAPP---------GYVLSESGGQLTEAVRRKPYAVVLFDEFE 592
Query: 815 KAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KA P V L + + GK TDS G V I V TS I
Sbjct: 593 KAH-PDVCKILLQVLDEGKLTDSLGHHVDFRNTIIVMTSNI 632
>gi|440715912|ref|ZP_20896435.1| protein disaggregation chaperone [Rhodopirellula baltica SWK14]
gi|436439064|gb|ELP32551.1| protein disaggregation chaperone [Rhodopirellula baltica SWK14]
Length = 881
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +S AV R R G R +GS FLGP VGK ++ AL
Sbjct: 589 LHQRVVGQDEAVTAVSDAVRRSRSGLQDPNRPIGS-------FLFLGPTGVGKTELCKAL 641
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE++F ++ ++ +D+S + + + + GK + + R +PY+
Sbjct: 642 AEVMFDDESAMVRIDMSEFMERHSVSRLIGAPP-GYVGYEEGGK-----LTEAVRRRPYA 695
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TD GR V+ + + V TS +
Sbjct: 696 VILLDEMEK-AHPDVFNVLLQVLDDGRLTDGQGRTVNFTNTVVVMTSNV 743
>gi|347522195|ref|YP_004779766.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae ATCC 49156]
gi|385833580|ref|YP_005871355.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae Lg2]
gi|343180763|dbj|BAK59102.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae ATCC 49156]
gi|343182733|dbj|BAK61071.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae Lg2]
Length = 748
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 25/177 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L E V QDEAI IS+AV R R+G G+ N G +L F+GP VGK ++A LA
Sbjct: 439 LKEHVIGQDEAIDKISKAVRRSRVGLGK---PNRPIGSFL-FVGPTGVGKTELAKQLAYE 494
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQEFRS 802
+FG++ +I D+S + +S+ KL G V Y + + R
Sbjct: 495 LFGSRDSMIRFDMSE---YMEKHSV----------AKLIGAPPGYVGYEEAGQLTERVRR 541
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
PYS++ L++++KA P V + + G+ TD+ GR VS I + TS GK
Sbjct: 542 NPYSLILLDEIEKAH-PDVMHMFLQILDDGRLTDAQGRTVSFKDAIIIMTSNAGTGK 597
>gi|407001910|gb|EKE18798.1| hypothetical protein ACD_9C00232G0001, partial [uncultured
bacterium]
Length = 436
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 17/224 (7%)
Query: 655 VSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG 714
+SE T + + + A E + + L L +V QDEAI +S A+ R R G
Sbjct: 119 ISEKTVADYLSLKTGVAQGEIEGAERKKLLNLEALLHRQVIGQDEAIKQVSGALRRARSG 178
Query: 715 NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSI 774
G S+ G +L FLGP VGK + A ALA+I FG++ K+I +D+S Q + +
Sbjct: 179 IG---NSDKPVGSFL-FLGPTGVGKTETAKALAKIYFGSEDKMIRLDMSEFQTPDSIDRL 234
Query: 775 FDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKF 834
+D +G+++ + + PYS++ L++++KA P + + + G
Sbjct: 235 LGSSRLD-----QQGRLVT-----QIKDNPYSLLLLDEIEKAY-PEILDIFLQILDEGYV 283
Query: 835 TDSYGRDVSISGMIFVATSTILKG--KHSVHPQTTPVKFSEEII 876
D++G +S + +ATS K + + +P + + +I
Sbjct: 284 NDAFGNKISFRNTMIIATSNAGAAVIKEMIQQKNSPEEIKQAVI 327
>gi|383642746|ref|ZP_09955152.1| Clp protease ATP binding subunit, partial [Streptomyces chartreusis
NRRL 12338]
Length = 812
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 693 KVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QDEA+ +S AV R R G R +GS FLGP VGK ++A ALAE
Sbjct: 507 RVVGQDEAVRVVSDAVLRSRAGLASPDRPIGS-------FLFLGPTGVGKTELARALAEA 559
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG++ +++ +D+S Q + + + + G+ + + R PYS++
Sbjct: 560 LFGSEDRMVRLDMSEYQERHTVSRLVGAPP-GYVGHEEAGQ-----LTEVVRRHPYSLLL 613
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
L++++K A P V + L + + G+ TDS GR V + + V TS +
Sbjct: 614 LDEVEK-AHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNL 658
>gi|406957814|gb|EKD85668.1| hypothetical protein ACD_37C00660G0003 [uncultured bacterium]
Length = 790
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 27/183 (14%)
Query: 675 GEPFDPRDYKTLRIALAEK----VGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLA 730
GEP RD + L + + + + QDEA+ +S+A+ R R G R+ + I
Sbjct: 488 GEP--TRDERMLLLNMETEMHKFIIGQDEAVSAVSEAMRRIRAGLTRE------KPISFL 539
Query: 731 FLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK 790
FLGP VGK + A L++I FG + +I VD+S + + F D L
Sbjct: 540 FLGPTGVGKTETAKTLSKIYFGGEAHIIRVDMSEYSADESVEKMLNSGAGSFLDDVL--- 596
Query: 791 VLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFV 850
S P+S++ L++ +KA + I+ L + ++ + TD+ GR +S S I +
Sbjct: 597 -----------SHPFSLILLDEFEKANNRILNLFL-QVLADARLTDNQGRTISFSNAIII 644
Query: 851 ATS 853
ATS
Sbjct: 645 ATS 647
>gi|347520959|ref|YP_004778530.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae ATCC 49156]
gi|385832322|ref|YP_005870097.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae Lg2]
gi|343179527|dbj|BAK57866.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae ATCC 49156]
gi|343181475|dbj|BAK59813.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae Lg2]
Length = 816
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 31/176 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EAI +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 515 LHKRVVGQEEAISAVSRAIRRARSGIADTRRPLGS-------FMFLGPTGVGKTELAKAL 567
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQE 799
AE VFG++ +I VD+S F +L G V Y + ++
Sbjct: 568 AESVFGSEENMIRVDMSEFME-------------KFSTSRLIGAPPGYVGYDEGGQLTEQ 614
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R+KPYSV+ L++++K A P + + + + + G TD+ GR V I + TS +
Sbjct: 615 VRNKPYSVILLDEVEK-AHPDIFNIMLQILDDGFVTDTKGRKVDFRNTIIIMTSNL 669
>gi|255693870|ref|ZP_05417545.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Bacteroides
finegoldii DSM 17565]
gi|260620319|gb|EEX43190.1| ATPase family associated with various cellular activities (AAA)
[Bacteroides finegoldii DSM 17565]
Length = 842
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD AI + +A+ R R+G +D N G ++ FLGP VGK +A LA+
Sbjct: 536 LQSKVIAQDTAIEKLVKAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKELAKY 591
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 592 MFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 638
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I G +
Sbjct: 639 KPYSIVLLDEIEK-AHPDVFNILLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--GTRQL 695
Query: 863 HPQTTPVKFSEEIILGAK---RWQMQTAISHGFA 893
V F+ + L K R +Q A++ FA
Sbjct: 696 KEFGRGVGFATQSRLDDKEFSRSVIQKALNKSFA 729
>gi|399889691|ref|ZP_10775568.1| negative regulator of genetic competence mecB/clpC [Clostridium
arbusti SL206]
Length = 813
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 88/171 (51%), Gaps = 21/171 (12%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q+EA+ ++S+AV R R+G R +GS FLGP VGK +++ AL
Sbjct: 511 LHKRVIGQNEAVKSVSRAVRRARVGLKDPKRPIGS-------FIFLGPTGVGKTELSKAL 563
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDC--QNIDFCDCKLRGKVLVDYIYQEFRSKP 804
AE +FG++ +I +D+S + + + F D + ++ R KP
Sbjct: 564 AEAMFGDESSIIRIDMSEYMEKHTVSRLIGSPPGYVGFDDG--------GQLTEKVRRKP 615
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
YSVV ++++K A P V + L + + G+ TD G+ V+ I + TS +
Sbjct: 616 YSVVLFDEIEK-AHPDVFNILLQILEDGRLTDGKGKTVNFQNTIIILTSNV 665
>gi|332981035|ref|YP_004462476.1| ATPase AAA-2 domain-containing protein [Mahella australiensis 50-1
BON]
gi|332698713|gb|AEE95654.1| ATPase AAA-2 domain protein [Mahella australiensis 50-1 BON]
Length = 815
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 33/188 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEA+ +++A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 507 LHERVIGQDEAVEAVAKAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 559
Query: 747 AEIVFGNKGKLIHVDVSS-------EQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQE 799
AE +FG++ ++ +D+S + + P + G L +++
Sbjct: 560 AEAMFGDENAMVRIDMSEYMEKYSVSRLIGSPPGYVGYEE---------GGQLTEHV--- 607
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
R KPY+VV ++++K A P V + L + + G+ TD GR V + + TS G
Sbjct: 608 -RRKPYTVVLFDEIEK-AHPDVFNILLQILEDGRLTDGKGRTVDFRNTVIIMTSN--AGA 663
Query: 860 HSVHPQTT 867
H + Q +
Sbjct: 664 HLITKQKS 671
>gi|313886325|ref|ZP_07820050.1| putative negative regulator of genetic competence ClpC/MecB
[Porphyromonas asaccharolytica PR426713P-I]
gi|312924194|gb|EFR34978.1| putative negative regulator of genetic competence ClpC/MecB
[Porphyromonas asaccharolytica PR426713P-I]
Length = 1009
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIA 743
+ +R L + V QD+AI + +A+ R R+G G D N G +L FLGP VGK +A
Sbjct: 671 RQMRQTLKDIVIGQDDAIDKVVKAIQRNRLGLGSD---NRPIGSFL-FLGPTGVGKTYLA 726
Query: 744 SALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEF 800
LAE++F ++ LI +D+S + N+ G V D + ++
Sbjct: 727 KKLAELLFDDEDALIRIDMS---------EYMESFNVSRLVGAAPGYVGYDEGGQLTEQV 777
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKH 860
R KPYSVV ++L+K A P V + L + + G T + G VS + + TS I G
Sbjct: 778 RRKPYSVVLFDELEK-AHPDVYNILLQILDDGFITAADGTHVSFKNTVIILTSNI--GTR 834
Query: 861 SVHPQTTPVKFSEEIIL 877
+ V F +E+ L
Sbjct: 835 QLKDFGAGVGFRQEVQL 851
>gi|434398661|ref|YP_007132665.1| ATPase AAA-2 domain protein [Stanieria cyanosphaera PCC 7437]
gi|428269758|gb|AFZ35699.1| ATPase AAA-2 domain protein [Stanieria cyanosphaera PCC 7437]
Length = 788
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 17/173 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASA 745
L L E+V QDEA+C +S+A+ R R G + S ++ F GP VGK ++A A
Sbjct: 470 LEANLHERVIGQDEAVCAVSRALRRARAG----LSSPNRPIASFIFSGPTGVGKTELAKA 525
Query: 746 LAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRS 802
LA +FG++ +I +D+S + + G + D + + R
Sbjct: 526 LATYMFGSENAMIRLDMS---------EFMESHTVSKLIGSPPGYIGYDEGGQLTEAIRR 576
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+PYS+V ++++K A P V + L + + G+ TD+ GR V+ + I + TS I
Sbjct: 577 QPYSLVLFDEIEK-AHPDVFNLLLQLLDDGRLTDAQGRVVNFNNAIIIMTSNI 628
>gi|378549452|ref|ZP_09824668.1| hypothetical protein CCH26_05167 [Citricoccus sp. CH26A]
Length = 845
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 93/172 (54%), Gaps = 11/172 (6%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIA 743
+ + + ++V QDEAI ++SQA+ R R G +D N G ++ F GP VGK ++A
Sbjct: 512 RNMEAEIHQRVIGQDEAIKSLSQAIRRTRAGL-KD--PNRPSGSFI-FAGPTGVGKTELA 567
Query: 744 SALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSK 803
ALAE +FG++ LI +D+S Q + +F + + G+ + ++ R +
Sbjct: 568 KALAEFLFGDEDALITLDMSEFQEKHTVSRLFGAPP-GYVGYEEGGQ-----LTEKVRRR 621
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
P+SVV ++++KA + +SL + + G+ TDS GR V + + T+ +
Sbjct: 622 PFSVVLFDEVEKAHADLF-NSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 672
>gi|421611979|ref|ZP_16053103.1| protein disaggregation chaperone [Rhodopirellula baltica SH28]
gi|408497244|gb|EKK01779.1| protein disaggregation chaperone [Rhodopirellula baltica SH28]
Length = 881
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +S AV R R G R +GS FLGP VGK ++ AL
Sbjct: 589 LHQRVVGQDEAVTAVSDAVRRSRSGLQDPNRPIGS-------FLFLGPTGVGKTELCKAL 641
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE++F ++ ++ +D+S + + + + GK + + R +PY+
Sbjct: 642 AEVMFDDESAMVRIDMSEFMERHSVSRLIGAPP-GYVGYEEGGK-----LTEAVRRRPYA 695
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TD GR V+ + + V TS +
Sbjct: 696 VILLDEMEK-AHPDVFNVLLQVLDDGRLTDGQGRTVNFTNTVVVMTSNV 743
>gi|420143840|ref|ZP_14651333.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae IPLA 31405]
gi|391856229|gb|EIT66773.1| ATP-dependent Clp protease ATP-binding subunit [Lactococcus
garvieae IPLA 31405]
Length = 748
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 88/177 (49%), Gaps = 25/177 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L E V QDEAI IS+AV R R+G G+ N G +L F+GP VGK ++A LA
Sbjct: 439 LKEHVIGQDEAIDKISKAVRRSRVGLGK---PNRPIGSFL-FVGPTGVGKTELAKQLAYE 494
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQEFRS 802
+FG++ +I D+S + +S+ KL G V Y + + R
Sbjct: 495 LFGSRDSMIRFDMSE---YMEKHSV----------AKLIGAPPGYVGYEEAGQLTERVRR 541
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
PYS++ L++++KA P V + + G+ TD+ GR VS I + TS GK
Sbjct: 542 NPYSLILLDEIEKAH-PDVMHMFLQILDDGRLTDAQGRTVSFKDAIIIMTSNAGTGK 597
>gi|436833468|ref|YP_007318684.1| ATP-dependent chaperone ClpB [Fibrella aestuarina BUZ 2]
gi|384064881|emb|CCG98091.1| ATP-dependent chaperone ClpB [Fibrella aestuarina BUZ 2]
Length = 886
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 88/182 (48%), Gaps = 21/182 (11%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIAS 744
L L ++V Q+EAI ++ AV R R G + KR I FLG VGK ++A
Sbjct: 570 LEAELGKRVAGQEEAIQVVADAVRRSRAGM-----QDPKRPIGSFLFLGTTGVGKTELAK 624
Query: 745 ALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFR 801
ALAE +F ++ L+ +D+S Q + + G V D + + R
Sbjct: 625 ALAEFLFNDENALVRIDMSEYQERHAASRLIGAPP---------GYVGYDEGGQLTEAVR 675
Query: 802 SKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHS 861
KPYSV+ L++++K A P V + L + + G+ TD+ GR + I + TS I G H
Sbjct: 676 RKPYSVILLDEIEK-AHPDVFNILLQVLDDGRLTDNKGRVANFKNTIIIMTSNI--GSHI 732
Query: 862 VH 863
+
Sbjct: 733 IR 734
>gi|257068481|ref|YP_003154736.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium faecium DSM 4810]
gi|256559299|gb|ACU85146.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium faecium DSM 4810]
Length = 879
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V QDEAI IS+A+ R R G + + G F GP VGK ++A ALAE
Sbjct: 510 LHKRVIGQDEAIKAISRAIRRTRAG----LKDPKRPGGSFIFAGPTGVGKTELAKALAEF 565
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYS 806
+FG++ LI +D+S + +F G V D + ++ R KP+S
Sbjct: 566 LFGDEESLIQLDMSEFGEKHTASRLFGSPP---------GYVGYDEGGQLTEKVRRKPFS 616
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++KA I +SL + + G+ TDS GR V I + T+ +
Sbjct: 617 VVLFDEVEKAHVDIF-NSLLQILEDGRLTDSQGRVVDFKNTIIIMTTNL 664
>gi|15559055|gb|AAL02102.1|AF404759_1 ClpB protease [Bacteroides fragilis 638R]
Length = 442
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD+AI + +A+ R R+G +D N G ++ FLGP VGK +A LA+
Sbjct: 134 LQSKVIAQDDAIKKLVKAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKELAKY 189
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 190 MFGSSDALIRIDMSEFME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 236
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++KA P V + L + + G+ TDSYGR V + + TS I G +
Sbjct: 237 KPYSIVLLDEIEKAH-PDVFNLLLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--GTRQL 293
Query: 863 HPQTTPVKFSEEIILGAKRWQ---MQTAISHGFA 893
V F+ + L K + +Q A++ FA
Sbjct: 294 KEFGRGVGFATQSRLDDKEFSRSVIQKALNKSFA 327
>gi|383113153|ref|ZP_09933929.1| hypothetical protein BSGG_0003 [Bacteroides sp. D2]
gi|313692468|gb|EFS29303.1| hypothetical protein BSGG_0003 [Bacteroides sp. D2]
Length = 842
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD AI + +A+ R R+G +D N G ++ FLGP VGK +A LA+
Sbjct: 536 LQAKVIAQDTAIEKLVKAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKELAKY 591
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 592 MFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 638
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I G +
Sbjct: 639 KPYSIVLLDEIEK-AHPDVFNILLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--GTRQL 695
Query: 863 HPQTTPVKFSEEIILGAK---RWQMQTAISHGFA 893
V F+ + L K R +Q A++ FA
Sbjct: 696 KEFGRGVGFATQSRLDDKEFSRSVIQKALNKSFA 729
>gi|417302305|ref|ZP_12089409.1| protein disaggregation chaperone [Rhodopirellula baltica WH47]
gi|327541369|gb|EGF27909.1| protein disaggregation chaperone [Rhodopirellula baltica WH47]
Length = 881
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V QDEA+ +S AV R R G R +GS FLGP VGK ++ AL
Sbjct: 589 LHQRVVGQDEAVTAVSDAVRRSRSGLQDPNRPIGS-------FLFLGPTGVGKTELCKAL 641
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE++F ++ ++ +D+S + + + + GK + + R +PY+
Sbjct: 642 AEVMFDDESAMVRIDMSEFMERHSVSRLIGAPP-GYVGYEEGGK-----LTEAVRRRPYA 695
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
V+ L++++K A P V + L + + G+ TD GR V+ + + V TS +
Sbjct: 696 VILLDEMEK-AHPDVFNVLLQVLDDGRLTDGQGRTVNFTNTVVVMTSNV 743
>gi|325674654|ref|ZP_08154341.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
equi ATCC 33707]
gi|325554240|gb|EGD23915.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
equi ATCC 33707]
Length = 810
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 31/187 (16%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIGNG---RDVGSNSKRGIWLAFLGPD 735
D + L L ++V Q++A+ I++AV R R G G R VGS FLGP
Sbjct: 498 DKERLRRLEDELHQRVVGQEDAVKAIARAVRRSRTGMGDPRRPVGS-------FLFLGPT 550
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVS-------SEQRVSQPNSIFDCQNIDFCDCKLR 788
VGK ++A ALA+ +FG++ K++ +D+S + + V P
Sbjct: 551 GVGKTELAKALAQSLFGDESKMLRLDMSEFGERHTASRLVGAPPGYV------------- 597
Query: 789 GKVLVDYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMI 848
G + ++ R PYSV+ L++++K A P V + L + + G+ TD GR V +
Sbjct: 598 GYGEAGQLTEQVRRHPYSVILLDEIEK-AHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTV 656
Query: 849 FVATSTI 855
+ TS +
Sbjct: 657 LIMTSNL 663
>gi|313203332|ref|YP_004041989.1| ATPase AAA [Paludibacter propionicigenes WB4]
gi|312442648|gb|ADQ79004.1| ATPase AAA-2 domain protein [Paludibacter propionicigenes WB4]
Length = 836
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
+ ++ AL KV QDEA+ I +A+ R RIG + +GS F+GP VGK
Sbjct: 518 RQMKDALQGKVIGQDEAVNKIVKAIQRNRIGLKDPSKPIGS-------FIFIGPTGVGKT 570
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
+A LAE +F + LI VD+S F + G + ++
Sbjct: 571 HLAKILAEFMFDSSDALIRVDMSEYMEK------FSVSRLIGAPPGYVGYEEGGQLTEKV 624
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKH 860
R KPYS++ L++++K A P V + L + + G+ TDS GR + I + TS + G
Sbjct: 625 RRKPYSIILLDEIEK-AHPDVFNLLLQVMDEGRLTDSLGRRIDFKNTIIIMTSNV--GTR 681
Query: 861 SVHPQTTPVKFS--EEIILGAK--RWQMQTAISHGFA 893
+ V F+ E + A+ R +Q A++ FA
Sbjct: 682 QLKDFGKGVGFNTPAETAMDAEFSRGVIQKALNRAFA 718
>gi|402297897|ref|ZP_10817634.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Bacillus
alcalophilus ATCC 27647]
gi|401726867|gb|EJT00077.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Bacillus
alcalophilus ATCC 27647]
Length = 718
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
K L LAEKV Q EA+ +++A+ R R G R +GS F+GP VGK
Sbjct: 419 KNLAPRLAEKVIGQVEAVEKVAKAIRRSRAGLKAKHRPIGS-------FLFVGPTGVGKT 471
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEF 800
++ LAE +FG+K +I +D+S + + G + ++
Sbjct: 472 ELTKTLAEELFGSKDAMIRLDMSEYMEKHSVSKLIG------SPPGYVGHEEAGQLTEKV 525
Query: 801 RSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
R KPYS++ L++++K A P VQ + + G TDS GR VS + + TS
Sbjct: 526 RRKPYSIILLDEIEK-AHPDVQHMFLQILEDGHLTDSQGRKVSFKDTVIIMTS 577
>gi|423218790|ref|ZP_17205286.1| hypothetical protein HMPREF1061_02059 [Bacteroides caccae
CL03T12C61]
gi|392626407|gb|EIY20453.1| hypothetical protein HMPREF1061_02059 [Bacteroides caccae
CL03T12C61]
Length = 844
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD AI + +A+ R R+G +D N G ++ FLGP VGK +A LA+
Sbjct: 538 LQSKVIAQDTAIEKLVKAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKELAKY 593
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 594 MFGSSDALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 640
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I G +
Sbjct: 641 KPYSIVLLDEIEK-AHPDVFNLLLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--GTRQL 697
Query: 863 HPQTTPVKFSEEIILGAK---RWQMQTAISHGFA 893
V F+ + L K R +Q A++ FA
Sbjct: 698 KDFGRGVGFATQSRLDDKEFSRSVIQKALNKSFA 731
>gi|336416109|ref|ZP_08596446.1| hypothetical protein HMPREF1017_03554 [Bacteroides ovatus
3_8_47FAA]
gi|335939286|gb|EGN01162.1| hypothetical protein HMPREF1017_03554 [Bacteroides ovatus
3_8_47FAA]
Length = 842
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD AI + +A+ R R+G +D N G ++ FLGP VGK +A LA+
Sbjct: 536 LQAKVIAQDTAIEKLVKAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKELAKY 591
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 592 MFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 638
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I G +
Sbjct: 639 KPYSIVLLDEIEK-AHPDVFNILLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--GTRQL 695
Query: 863 HPQTTPVKFSEEIILGAK---RWQMQTAISHGFA 893
V F+ + L K R +Q A++ FA
Sbjct: 696 KEFGRGVGFATQSRLDDKEFSRSVIQKALNKSFA 729
>gi|299145618|ref|ZP_07038686.1| negative regulator of genetic competence ClpC/MecB [Bacteroides sp.
3_1_23]
gi|298516109|gb|EFI39990.1| negative regulator of genetic competence ClpC/MecB [Bacteroides sp.
3_1_23]
Length = 842
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD AI + +A+ R R+G +D N G ++ FLGP VGK +A LA+
Sbjct: 536 LQAKVIAQDTAIEKLVKAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKELAKY 591
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 592 MFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 638
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I G +
Sbjct: 639 KPYSIVLLDEIEK-AHPDVFNILLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--GTRQL 695
Query: 863 HPQTTPVKFSEEIILGAK---RWQMQTAISHGFA 893
V F+ + L K R +Q A++ FA
Sbjct: 696 KEFGRGVGFATQSRLDDKEFSRSVIQKALNKSFA 729
>gi|300362397|ref|ZP_07058573.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
gasseri JV-V03]
gi|300353388|gb|EFJ69260.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
gasseri JV-V03]
Length = 822
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 90/188 (47%), Gaps = 33/188 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD+AI +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 514 LHERVIGQDKAISAVSRAIRRSRSGIKDENRPIGS-------FLFLGPTGVGKTELAKAL 566
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQE 799
A VFG++ +I VD+S + + Q KL G V Y + +
Sbjct: 567 AAAVFGSERNIIRVDMS--EYMDQ-----------VATSKLIGSAPGYVGYEEGGQLSER 613
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
R PYSV+ L++++K A P V + L + + G TDS GR V I + TS + G
Sbjct: 614 VRRNPYSVILLDEVEK-AHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL--GS 670
Query: 860 HSVHPQTT 867
S+ T
Sbjct: 671 RSLQEDKT 678
>gi|160882760|ref|ZP_02063763.1| hypothetical protein BACOVA_00721 [Bacteroides ovatus ATCC 8483]
gi|423286726|ref|ZP_17265577.1| hypothetical protein HMPREF1069_00620 [Bacteroides ovatus
CL02T12C04]
gi|423296510|ref|ZP_17274595.1| hypothetical protein HMPREF1070_03260 [Bacteroides ovatus
CL03T12C18]
gi|156111784|gb|EDO13529.1| ATPase family associated with various cellular activities (AAA)
[Bacteroides ovatus ATCC 8483]
gi|392670233|gb|EIY63718.1| hypothetical protein HMPREF1070_03260 [Bacteroides ovatus
CL03T12C18]
gi|392674264|gb|EIY67712.1| hypothetical protein HMPREF1069_00620 [Bacteroides ovatus
CL02T12C04]
Length = 842
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD AI + +A+ R R+G +D N G ++ FLGP VGK +A LA+
Sbjct: 536 LQAKVIAQDTAIEKLVKAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKELAKY 591
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 592 MFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 638
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I G +
Sbjct: 639 KPYSIVLLDEIEK-AHPDVFNILLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--GTRQL 695
Query: 863 HPQTTPVKFSEEIILGAK---RWQMQTAISHGFA 893
V F+ + L K R +Q A++ FA
Sbjct: 696 KEFGRGVGFATQSRLDDKEFSRSVIQKALNKSFA 729
>gi|427418168|ref|ZP_18908351.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
gi|425760881|gb|EKV01734.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
Length = 817
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 27/189 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L +++ Q+ A+ +++A+ R R+G + S + F GP VGK ++ ALA+I
Sbjct: 504 LHQRIIGQENAVNAVAKAIRRARVG----LRSEQRPIASFIFCGPTGVGKTELTKALADI 559
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
VFG + +I +D+S +P S+ KL G V Y + + R
Sbjct: 560 VFGAEDAIIRLDMSE---YMEPQSV----------AKLIGSPPGYVGYGDGGQLTEAVRR 606
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPY+VV ++++K A P V + L + + G+ TDS GR V + + TS I G ++
Sbjct: 607 KPYTVVLFDEIEK-AHPDVFNLLLQLLDDGRLTDSQGRVVDFKNTVIIMTSNI--GSRAI 663
Query: 863 HPQTTPVKF 871
Q T + F
Sbjct: 664 EKQGTGIGF 672
>gi|298484188|ref|ZP_07002354.1| negative regulator of genetic competence ClpC/MecB [Bacteroides sp.
D22]
gi|298269692|gb|EFI11287.1| negative regulator of genetic competence ClpC/MecB [Bacteroides sp.
D22]
Length = 842
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD AI + +A+ R R+G +D N G ++ FLGP VGK +A LA+
Sbjct: 536 LQAKVIAQDTAIEKLVKAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKELAKY 591
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 592 MFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 638
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I G +
Sbjct: 639 KPYSIVLLDEIEK-AHPDVFNILLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--GTRQL 695
Query: 863 HPQTTPVKFSEEIILGAK---RWQMQTAISHGFA 893
V F+ + L K R +Q A++ FA
Sbjct: 696 KEFGRGVGFATQSRLDDKEFSRSVIQKALNKSFA 729
>gi|4587717|gb|AAD25872.1|AF027500_2 ATP-dependent Clp protease regulatory subunit [Aquifex pyrophilus]
Length = 631
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V QDEAI +++A+ R R+G G + G+++ FLGP VGK + A ALAE
Sbjct: 437 LKKRVIGQDEAIKAVAKAIRRSRVGLK---GKHRPIGVFM-FLGPTGVGKTETAKALAEY 492
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG + LI D+S + + + + G+ + + R +PYSV+
Sbjct: 493 LFGTEDALIRFDMSEYMEKHTVSRLIGAPP-GYVGYEEGGQ-----LTEAVRRRPYSVLL 546
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P V + + G+ TD GR V S I + TS +
Sbjct: 547 FDEIEK-AHPDVFNVFLQIFDDGRLTDGLGRTVDFSNTIIIMTSNL 591
>gi|237720667|ref|ZP_04551148.1| ATP-dependent Clp protease [Bacteroides sp. 2_2_4]
gi|229449502|gb|EEO55293.1| ATP-dependent Clp protease [Bacteroides sp. 2_2_4]
Length = 842
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD AI + +A+ R R+G +D N G ++ FLGP VGK +A LA+
Sbjct: 536 LQAKVIAQDTAIEKLVKAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKELAKY 591
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 592 MFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 638
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I G +
Sbjct: 639 KPYSIVLLDEIEK-AHPDVFNILLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--GTRQL 695
Query: 863 HPQTTPVKFSEEIILGAK---RWQMQTAISHGFA 893
V F+ + L K R +Q A++ FA
Sbjct: 696 KEFGRRVGFATQSRLDDKEFSRSVIQKALNKSFA 729
>gi|293188976|ref|ZP_06607709.1| ATP-dependent chaperone protein ClpB [Actinomyces odontolyticus
F0309]
gi|292822078|gb|EFF81004.1| ATP-dependent chaperone protein ClpB [Actinomyces odontolyticus
F0309]
Length = 866
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 16/189 (8%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L +++ Q EA+ +S AV R R G N G +L FLGP VGK ++A ALAE
Sbjct: 572 LGKRLIGQKEAVRAVSDAVRRSRAGLS---DPNRPTGSFL-FLGPTGVGKTELAKALAEF 627
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNI--DFCDCKLRGKVLVDYIYQEFRSKPYSV 807
+F ++ ++ +D+S S+ +S+ + + G+ + + R +PYSV
Sbjct: 628 LFDDERAMVRIDMSE---YSEKHSVARLVGAPPGYVGYEQGGQ-----LTEAVRRRPYSV 679
Query: 808 VFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTT 867
V L++++K ADP + L + + G+ TD GR V I + TS L + P T
Sbjct: 680 VLLDEVEK-ADPEIFDILLQVLDDGRLTDGQGRTVDFRNTILILTSN-LGSQFLADPDLT 737
Query: 868 PVKFSEEII 876
P + E ++
Sbjct: 738 PEEKRESVM 746
>gi|238853491|ref|ZP_04643869.1| negative regulator of genetic competence ClpC/mecB [Lactobacillus
gasseri 202-4]
gi|238833931|gb|EEQ26190.1| negative regulator of genetic competence ClpC/mecB [Lactobacillus
gasseri 202-4]
Length = 822
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 90/188 (47%), Gaps = 33/188 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD+AI +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 514 LHERVIGQDKAISAVSRAIRRSRSGIKDENRPIGS-------FLFLGPTGVGKTELAKAL 566
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQE 799
A VFG++ +I VD+S + + Q KL G V Y + +
Sbjct: 567 AAAVFGSERNIIRVDMS--EYMDQ-----------VATSKLIGSAPGYVGYEEGGQLSER 613
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
R PYSV+ L++++K A P V + L + + G TDS GR V I + TS + G
Sbjct: 614 VRRNPYSVILLDEVEK-AHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL--GS 670
Query: 860 HSVHPQTT 867
S+ T
Sbjct: 671 RSLQEDKT 678
>gi|401841836|gb|EJT44161.1| HSP78-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 810
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 653 DAVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWR 712
D+VS VV + T D + +L E+V QDEAI IS AV R
Sbjct: 464 DSVSSDDISKVVAKMTGIPTETVMKGDKDRLLYMENSLKERVVGQDEAIAAISDAVRLQR 523
Query: 713 IGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQP 771
G ++ KR I FLGP GK ++ ALAE +F ++ +I D+S Q
Sbjct: 524 AG-----LTSEKRPIASFMFLGPTGTGKTELTKALAEFLFDDESNVIRFDMSEFQEKHTV 578
Query: 772 NSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKA 828
+ + G VL + + + R KPY+V+ ++ +KA P V L +
Sbjct: 579 SRLIGAPP---------GYVLSESGGQLTEAVRRKPYAVILFDEFEKAH-PDVSKLLLQV 628
Query: 829 ISTGKFTDSYGRDVSISGMIFVATSTI 855
+ GK TDS G V I V TS I
Sbjct: 629 LDEGKLTDSLGHHVDFRNTIIVMTSNI 655
>gi|262408112|ref|ZP_06084660.1| ATP-dependent chaperone ClpB [Bacteroides sp. 2_1_22]
gi|294645223|ref|ZP_06722941.1| putative negative regulator of genetic competence ClpC/MecB
[Bacteroides ovatus SD CC 2a]
gi|294806090|ref|ZP_06764944.1| putative negative regulator of genetic competence ClpC/MecB
[Bacteroides xylanisolvens SD CC 1b]
gi|336402227|ref|ZP_08582967.1| hypothetical protein HMPREF0127_00280 [Bacteroides sp. 1_1_30]
gi|345511416|ref|ZP_08790957.1| ATP-dependent Clp protease [Bacteroides sp. D1]
gi|423213593|ref|ZP_17200122.1| hypothetical protein HMPREF1074_01654 [Bacteroides xylanisolvens
CL03T12C04]
gi|229444161|gb|EEO49952.1| ATP-dependent Clp protease [Bacteroides sp. D1]
gi|262354920|gb|EEZ04012.1| ATP-dependent chaperone ClpB [Bacteroides sp. 2_1_22]
gi|292639434|gb|EFF57734.1| putative negative regulator of genetic competence ClpC/MecB
[Bacteroides ovatus SD CC 2a]
gi|294446707|gb|EFG15320.1| putative negative regulator of genetic competence ClpC/MecB
[Bacteroides xylanisolvens SD CC 1b]
gi|295084195|emb|CBK65718.1| ATPases with chaperone activity, ATP-binding subunit [Bacteroides
xylanisolvens XB1A]
gi|335940062|gb|EGN01932.1| hypothetical protein HMPREF0127_00280 [Bacteroides sp. 1_1_30]
gi|392694053|gb|EIY87283.1| hypothetical protein HMPREF1074_01654 [Bacteroides xylanisolvens
CL03T12C04]
Length = 842
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD AI + +A+ R R+G +D N G ++ FLGP VGK +A LA+
Sbjct: 536 LQAKVIAQDTAIEKLVKAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKELAKY 591
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 592 MFGSADALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 638
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I G +
Sbjct: 639 KPYSIVLLDEIEK-AHPDVFNILLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--GTRQL 695
Query: 863 HPQTTPVKFSEEIILGAK---RWQMQTAISHGFA 893
V F+ + L K R +Q A++ FA
Sbjct: 696 KEFGRGVGFATQSRLDDKEFSRSVIQKALNKSFA 729
>gi|451980725|ref|ZP_21929111.1| Negative regulator of genetic competence ClpC/MecB [Nitrospina
gracilis 3/211]
gi|451762061|emb|CCQ90350.1| Negative regulator of genetic competence ClpC/MecB [Nitrospina
gracilis 3/211]
Length = 827
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 654 AVSEGTFHNVVQSSSCSAPHTGEPFDPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRI 713
+V+E NVV + + + + K + L ++V Q +AI +S A+ R R
Sbjct: 478 SVTEEDIANVVATWTGIPVNKIRETETEKLKNMEDNLHKRVIGQHQAIVALSNAIRRNRA 537
Query: 714 G---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQ 770
G R +GS FLGP VGK ++A ALAE + ++ +LI +D+S
Sbjct: 538 GLKDKNRPIGS-------FLFLGPTGVGKTELAKALAEFLLDDENRLIRLDMSEYMEKHA 590
Query: 771 PNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTK 827
+ I G V D + ++ R +PYSV+ L++L+KA P V + L +
Sbjct: 591 VSKIIGSPP---------GYVGYDEGGQLTEKVRRQPYSVILLDELEKAH-PDVFNILLQ 640
Query: 828 AISTGKFTDSYGRDVSISGMIFVATSTI 855
+ G+ TD+ GR S I + TS I
Sbjct: 641 LLDDGRLTDAQGRVTSFKNAIIIGTSNI 668
>gi|289450441|ref|YP_003474803.1| negative regulator of genetic competence ClpC/MecB [Clostridiales
genomosp. BVAB3 str. UPII9-5]
gi|289184988|gb|ADC91413.1| negative regulator of genetic competence ClpC/MecB [Clostridiales
genomosp. BVAB3 str. UPII9-5]
Length = 924
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 679 DPRDYKTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPD 735
D K L L +V QD A+ + QA+ R R+G R +GS FLG
Sbjct: 531 DTTRLKNLDKELKSRVIGQDAAVDAVVQAIRRGRLGLKDPQRPIGS-------FLFLGTT 583
Query: 736 KVGKKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDY 795
VGK ++A ALAE++FG+ +I +D +S+ FD + G
Sbjct: 584 GVGKTELAKALAEVMFGDPNAMIRLD------MSEYMEKFDVSKLIGSPPGYVGYDEGGQ 637
Query: 796 IYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
+ ++ R PYSV+ ++++K A P V ++L + + G+ TDS GR V + I + TS +
Sbjct: 638 LTEKVRRHPYSVILFDEIEK-AHPDVFNALLQILEDGRLTDSQGRTVKFANTIIIMTSNL 696
>gi|148381451|ref|YP_001255992.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A str. ATCC 3502]
gi|153932782|ref|YP_001385826.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A str. ATCC 19397]
gi|153936468|ref|YP_001389233.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A str. Hall]
gi|387819793|ref|YP_005680140.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Clostridium
botulinum H04402 065]
gi|148290935|emb|CAL85071.1| negative regulator of genetic competence [Clostridium botulinum A
str. ATCC 3502]
gi|152928826|gb|ABS34326.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum A str. ATCC 19397]
gi|152932382|gb|ABS37881.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum A str. Hall]
gi|322807837|emb|CBZ05412.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Clostridium
botulinum H04402 065]
Length = 811
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 35/189 (18%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EAI ++S++V R R+G R +GS FLGP VGK ++ AL
Sbjct: 508 LHNRVIGQEEAIKSVSRSVRRARVGLKDPKRPIGS-------FIFLGPTGVGKTELTKAL 560
Query: 747 AEIVFGNKGKLIHVDVS------SEQRV--SQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
AE +FGN+ +I VD+S S R+ S P + + G L D +
Sbjct: 561 AEAMFGNENNMIRVDMSEYMEKHSVSRLIGSPPGYVGHDE----------GGQLTDKV-- 608
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R+ PYSVV ++++K A P V + L + + G+ TD G+ V I + TS + G
Sbjct: 609 --RTNPYSVVLFDEIEK-AHPEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNV--G 663
Query: 859 KHSVHPQTT 867
++ Q T
Sbjct: 664 ASTISRQKT 672
>gi|423277495|ref|ZP_17256409.1| hypothetical protein HMPREF1203_00626 [Bacteroides fragilis HMW
610]
gi|404587244|gb|EKA91794.1| hypothetical protein HMPREF1203_00626 [Bacteroides fragilis HMW
610]
Length = 844
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD AI + +A+ R R+G +D N G ++ FLGP VGK +A LA+
Sbjct: 536 LQSKVIAQDAAIEKLVRAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKELAKY 591
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 592 MFGSSDALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 638
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I G +
Sbjct: 639 KPYSIVLLDEIEK-AHPDVFNLLLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--GTRQL 695
Query: 863 HPQTTPVKFSEEIILGAK---RWQMQTAISHGFA 893
V F+ + L K R +Q A++ FA
Sbjct: 696 KEFGRGVGFATQSRLDDKEFSRSVIQKALNKSFA 729
>gi|282852642|ref|ZP_06261984.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
gasseri 224-1]
gi|282556384|gb|EFB62004.1| negative regulator of genetic competence ClpC/MecB [Lactobacillus
gasseri 224-1]
Length = 822
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 90/188 (47%), Gaps = 33/188 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD+AI +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 514 LHERVIGQDKAISAVSRAIRRSRSGIKDENRPIGS-------FLFLGPTGVGKTELAKAL 566
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQE 799
A VFG++ +I VD+S + + Q KL G V Y + +
Sbjct: 567 AAAVFGSERNIIRVDMS--EYMDQ-----------VATSKLIGSAPGYVGYEEGGQLSER 613
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
R PYSV+ L++++K A P V + L + + G TDS GR V I + TS + G
Sbjct: 614 VRRNPYSVILLDEVEK-AHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL--GS 670
Query: 860 HSVHPQTT 867
S+ T
Sbjct: 671 RSLQEDKT 678
>gi|15606509|ref|NP_213889.1| ATP-dependent Clp protease [Aquifex aeolicus VF5]
gi|2983728|gb|AAC07290.1| ATP-dependent Clp protease [Aquifex aeolicus VF5]
Length = 810
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V QDEAI +++A+ R R+G G + G+++ FLGP VGK + A ALAE
Sbjct: 499 LKKRVVGQDEAIKAVAKAIRRSRVGLK---GKHRPIGVFM-FLGPTGVGKTETAKALAEY 554
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG + LI D+S + + + + G+ + + R +PYSV+
Sbjct: 555 LFGTEDALIRFDMSEYMEKHTVSRLIGAPP-GYVGYEEGGQ-----LTEAVRRRPYSVLL 608
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P V + + G+ TD GR V S I + TS +
Sbjct: 609 FDEIEK-AHPDVFNIFLQIFDDGRLTDGLGRTVDFSNTIIIMTSNL 653
>gi|170760517|ref|YP_001788851.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A3 str. Loch Maree]
gi|169407506|gb|ACA55917.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum A3 str. Loch Maree]
Length = 811
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 35/189 (18%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EAI ++S++V R R+G R +GS FLGP VGK ++ AL
Sbjct: 508 LHNRVIGQEEAIKSVSRSVRRARVGLKDPKRPIGS-------FIFLGPTGVGKTELTKAL 560
Query: 747 AEIVFGNKGKLIHVDVS------SEQRV--SQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
AE +FGN+ +I VD+S S R+ S P + + G L D +
Sbjct: 561 AEAMFGNENNMIRVDMSEYMEKHSVSRLIGSPPGYVGHDE----------GGQLTDKV-- 608
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R+ PYSVV ++++KA P V + L + + G+ TD G+ V I + TS + G
Sbjct: 609 --RTNPYSVVLFDEIEKAH-PEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNV--G 663
Query: 859 KHSVHPQTT 867
++ Q T
Sbjct: 664 ASTISRQKT 672
>gi|153806300|ref|ZP_01958968.1| hypothetical protein BACCAC_00556 [Bacteroides caccae ATCC 43185]
gi|149130977|gb|EDM22183.1| ATPase family associated with various cellular activities (AAA)
[Bacteroides caccae ATCC 43185]
Length = 844
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 30/214 (14%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L KV QD AI + +A+ R R+G +D N G ++ FLGP VGK +A LA+
Sbjct: 538 LQSKVIAQDTAIEKLVKAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKELAKY 593
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQEFRS 802
+FG+ LI +D+S F +L G V Y + ++ R
Sbjct: 594 MFGSSDALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTEKVRR 640
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
KPYS+V L++++K A P V + L + + G+ TDSYGR V + + TS I G +
Sbjct: 641 KPYSIVLLDEIEK-AHPDVFNLLLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--GTRQL 697
Query: 863 HPQTTPVKFSEEIILGAK---RWQMQTAISHGFA 893
V F+ + L K R +Q A++ FA
Sbjct: 698 KDFGRGVGFATQSRLDDKEFSRSVIQKALNKSFA 731
>gi|170016555|ref|YP_001727474.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum KM20]
gi|414597722|ref|ZP_11447282.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE E16]
gi|169803412|gb|ACA82030.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum KM20]
gi|390481561|emb|CCF29343.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE E16]
Length = 706
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 20/176 (11%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
KT+ LA KV QDEA+ +++A+ R R G R +GS F+GP VGK
Sbjct: 417 KTIGQRLAGKVIGQDEAVNMVARAIRRNRAGFDEGNRPIGS-------FLFVGPTGVGKT 469
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQN--IDFCDCKLRGKVLVDYIYQ 798
++A LA +FG+K +I +D+S ++ + + I + D + + +
Sbjct: 470 ELAKQLALDMFGSKENIIRLDMSEYSDLTAVSKLIGTTAGYIGYDDNS-------NTLTE 522
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
+ R PYS+V L++++K A+P V + L + + G+ TD G V+ + +ATS
Sbjct: 523 KVRRNPYSIVLLDEIEK-ANPQVLTLLLQVMDDGRLTDGQGNVVNFKNTVIIATSN 577
>gi|168181833|ref|ZP_02616497.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum Bf]
gi|237796972|ref|YP_002864524.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum Ba4 str. 657]
gi|182674884|gb|EDT86845.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum Bf]
gi|229263581|gb|ACQ54614.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum Ba4 str. 657]
Length = 811
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 35/189 (18%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EAI ++S++V R R+G R +GS FLGP VGK ++ AL
Sbjct: 508 LHNRVIGQEEAIKSVSRSVRRARVGLKDPKRPIGS-------FIFLGPTGVGKTELTKAL 560
Query: 747 AEIVFGNKGKLIHVDVS------SEQRV--SQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
AE +FGN+ +I VD+S S R+ S P + + G L D +
Sbjct: 561 AEAMFGNENNMIRVDMSEYMEKHSVSRLIGSPPGYVGHDE----------GGQLTDKV-- 608
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R+ PYSVV ++++KA P V + L + + G+ TD G+ V I + TS + G
Sbjct: 609 --RTNPYSVVLFDEIEKAH-PEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNV--G 663
Query: 859 KHSVHPQTT 867
++ Q T
Sbjct: 664 ASTISRQKT 672
>gi|335358050|ref|ZP_08549920.1| putative Clp-like ATP-dependent protease, ATP-binding subunit
[Lactobacillus animalis KCTC 3501]
Length = 720
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 20/170 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L KV QDEA+ +S+A+ R R G R +GS F+GP VGK ++A L
Sbjct: 418 LKGKVIGQDEAVEAVSRAIRRNRAGFDDGNRPIGS-------FLFVGPTGVGKTELAKQL 470
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQN--IDFCDCKLRGKVLVDYIYQEFRSKP 804
A +FGNK +I +D+S + + + + + D + + + R +P
Sbjct: 471 AYDMFGNKDAIIRLDMSEYSDRTAVSKLIGTTAGYVGYDDNS-------NTLTERVRRQP 523
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
YS+V L++++K ADP V + L + + G+ TD G V+ + +ATS
Sbjct: 524 YSIVLLDEIEK-ADPQVITLLLQVLDDGRLTDGQGNTVNFKNTVIIATSN 572
>gi|300812110|ref|ZP_07092558.1| putative negative regulator of genetic competence ClpC/MecB
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300496949|gb|EFK32023.1| putative negative regulator of genetic competence ClpC/MecB
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 819
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD+A+ ++ A+ R R G R +GS FLGP VGK ++A A+
Sbjct: 510 LHERVIGQDDAVKAVANAIRRSRSGLKDENRPIGS-------FLFLGPTGVGKTELAKAV 562
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE VFG++ +I VD+ SE + +S + + G+ + + R PYS
Sbjct: 563 AEAVFGSEDNIIRVDM-SEYMDRESSSKLIGSAPGYVGYEEGGQ-----LSNKVREHPYS 616
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A+P + + L + + G TDS GR V I + TS +
Sbjct: 617 VVLFDEVEK-ANPEIFNVLLRVLDEGFMTDSLGRKVDFRNTIIIMTSNL 664
>gi|322434287|ref|YP_004216499.1| ATP-dependent chaperone ClpB [Granulicella tundricola MP5ACTX9]
gi|321162014|gb|ADW67719.1| ATP-dependent chaperone ClpB [Granulicella tundricola MP5ACTX9]
Length = 888
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 19/176 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIW-LAFLGPDKVGKKKIASALAE 748
L E+V QDEA+ ++ A+ R R G S+ KR I FLGP VGK + A ALAE
Sbjct: 588 LRERVVGQDEALSAVANAIRRSRAGL-----SDPKRPIGSFIFLGPTGVGKTETARALAE 642
Query: 749 IVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSKPY 805
+F ++ ++ +D+S + + G V D + + R +PY
Sbjct: 643 FLFDDEAAMVRIDMSEYMEKHAVSRLIGAPP---------GYVGYDEGGQLTEAVRRRPY 693
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHS 861
VV ++++K A P V + L + + G+ TDS GR V + + TS I G+ S
Sbjct: 694 GVVLFDEIEK-AHPDVFNVLLQVLDDGRLTDSKGRTVDFKNTVLIMTSNIGAGQLS 748
>gi|187776547|ref|ZP_02993020.1| hypothetical protein CLOSPO_00059 [Clostridium sporogenes ATCC
15579]
gi|187775206|gb|EDU39008.1| ATPase family associated with various cellular activities (AAA)
[Clostridium sporogenes ATCC 15579]
Length = 814
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 25/184 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EAI ++S++V R R+G R +GS FLGP VGK ++ AL
Sbjct: 511 LHNRVIGQEEAIKSVSKSVRRARVGLKDPKRPIGS-------FIFLGPTGVGKTELTKAL 563
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE +FGN+ +I VD+S + ++ G V D + ++ R+
Sbjct: 564 AEAMFGNENNMIRVDMS---------EYMEKHSVSRLIGSPPGYVGHDEGGQLTEKVRTN 614
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVH 863
PYSVV ++++KA P V + L + + G+ TD G+ V I + TS + G ++
Sbjct: 615 PYSVVLFDEIEKAH-PEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNV--GASTIS 671
Query: 864 PQTT 867
Q T
Sbjct: 672 RQKT 675
>gi|168178801|ref|ZP_02613465.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum NCTC 2916]
gi|182670016|gb|EDT81992.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum NCTC 2916]
Length = 811
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 35/189 (18%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EAI ++S++V R R+G R +GS FLGP VGK ++ AL
Sbjct: 508 LHNRVIGQEEAIKSVSRSVRRARVGLKDPKRPIGS-------FIFLGPTGVGKTELTKAL 560
Query: 747 AEIVFGNKGKLIHVDVS------SEQRV--SQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
AE +FGN+ +I VD+S S R+ S P + + G L D +
Sbjct: 561 AEAMFGNENNMIRVDMSEYMEKHSVSRLIGSPPGYVGHDE----------GGQLTDKV-- 608
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R+ PYSVV ++++K A P V + L + + G+ TD G+ V I + TS + G
Sbjct: 609 --RTNPYSVVLFDEIEK-AHPEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNV--G 663
Query: 859 KHSVHPQTT 867
++ Q T
Sbjct: 664 ASTISRQKT 672
>gi|403071334|ref|ZP_10912666.1| ATP-dependent Clp protease [Oceanobacillus sp. Ndiop]
Length = 809
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q EA+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 509 LHNRVIGQSEAVDAVSKAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 561
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE++F ++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 562 AEVMFADEEAMIRIDM-SEYMERHATSRLVGSPPGYVGYEEGGQ-----LTEKVRRKPYS 615
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 616 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRLVDFRNTVIIMTSNV 663
>gi|424827469|ref|ZP_18252273.1| negative regulator of genetic competence MecB/ClpC [Clostridium
sporogenes PA 3679]
gi|365980083|gb|EHN16120.1| negative regulator of genetic competence MecB/ClpC [Clostridium
sporogenes PA 3679]
Length = 811
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 25/184 (13%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EAI ++S++V R R+G R +GS FLGP VGK ++ AL
Sbjct: 508 LHNRVIGQEEAIKSVSKSVRRARVGLKDPKRPIGS-------FIFLGPTGVGKTELTKAL 560
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVD---YIYQEFRSK 803
AE +FGN+ +I VD+S + ++ G V D + ++ R+
Sbjct: 561 AEAMFGNENNMIRVDMS---------EYMEKHSVSRLIGSPPGYVGHDEGGQLTEKVRTN 611
Query: 804 PYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVH 863
PYSVV ++++KA P V + L + + G+ TD G+ V I + TS + G ++
Sbjct: 612 PYSVVLFDEIEKAH-PEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNV--GASTIS 668
Query: 864 PQTT 867
Q T
Sbjct: 669 RQKT 672
>gi|226950963|ref|YP_002806054.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A2 str. Kyoto]
gi|226843529|gb|ACO86195.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A2 str. Kyoto]
Length = 811
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 35/189 (18%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EAI ++S++V R R+G R +GS FLGP VGK ++ AL
Sbjct: 508 LHNRVIGQEEAIKSVSRSVRRARVGLKDPKRPIGS-------FIFLGPTGVGKTELTKAL 560
Query: 747 AEIVFGNKGKLIHVDVS------SEQRV--SQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
AE +FGN+ +I VD+S S R+ S P + + G L D +
Sbjct: 561 AEAMFGNENNMIRVDMSEYMEKHSVSRLIGSPPGYVGHDE----------GGQLTDKV-- 608
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R+ PYSVV ++++K A P V + L + + G+ TD G+ V I + TS + G
Sbjct: 609 --RTNPYSVVLFDEIEK-AHPEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNV--G 663
Query: 859 KHSVHPQTT 867
++ Q T
Sbjct: 664 ASTISRQKT 672
>gi|184201561|ref|YP_001855768.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kocuria
rhizophila DC2201]
gi|183581791|dbj|BAG30262.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kocuria
rhizophila DC2201]
Length = 872
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 94/182 (51%), Gaps = 14/182 (7%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q+EAI +S+++ R R G + + G F GP VGK ++A ALAE
Sbjct: 517 LHKRVIGQNEAIKALSRSIRRTRAG----LKDPRRPGGSFIFAGPTGVGKTELAKALAEF 572
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG++ LI +D+S Q + +F + + G+ + ++ R KP+SVV
Sbjct: 573 LFGDEDALITLDMSEYQEKHTVSRLFGAPP-GYVGYEEGGQ-----LTEKVRRKPFSVVL 626
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQTTPV 869
++++KA + +SL + + G+ TDS GR V + + T+ + G + +T PV
Sbjct: 627 FDEVEKAHQDLF-NSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL--GTRDI-SRTVPV 682
Query: 870 KF 871
F
Sbjct: 683 GF 684
>gi|407797861|ref|ZP_11144776.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Salimicrobium
sp. MJ3]
gi|407017624|gb|EKE30381.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Salimicrobium
sp. MJ3]
Length = 821
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 17/173 (9%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKI 742
L L +V Q+EA+ ++++A+ R R G R +GS FLGP VGK ++
Sbjct: 512 LEDTLHNRVIGQEEAVDSVAKAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTEL 564
Query: 743 ASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRS 802
A ALAE +FG + +I VD+ SE S + + G+ + ++ R
Sbjct: 565 ARALAESMFGEEDAMIRVDM-SEYMEKHSTSRLVGSPPGYVGYEEGGQ-----LTEKVRQ 618
Query: 803 KPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
KPYSVV L++++K A P V + L + + G+ TD GR V + + TS +
Sbjct: 619 KPYSVVLLDEVEK-AHPDVFNVLLQVLEDGRLTDGKGRVVDFRNTVLIMTSNV 670
>gi|313123097|ref|YP_004033356.1| ATP-dependent clp protease, ATP-binding subunit [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312279660|gb|ADQ60379.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 819
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD+A+ ++ A+ R R G R +GS FLGP VGK ++A A+
Sbjct: 510 LHERVIGQDDAVKAVANAIRRSRSGLKDENRPIGS-------FLFLGPTGVGKTELAKAV 562
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE VFG++ +I VD+ SE + +S + + G+ + + R PYS
Sbjct: 563 AEAVFGSEDNIIRVDM-SEYMDRESSSKLIGSAPGYVGYEEGGQ-----LSNKVREHPYS 616
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A+P + + L + + G TDS GR V I + TS +
Sbjct: 617 VVLFDEVEK-ANPEIFNVLLRVLDEGFMTDSLGRKVDFRNTIIIMTSNL 664
>gi|116628955|ref|YP_814127.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus gasseri ATCC 33323]
gi|116094537|gb|ABJ59689.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus gasseri ATCC 33323]
Length = 838
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 90/188 (47%), Gaps = 33/188 (17%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD+AI +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 530 LHERVIGQDKAISAVSRAIRRSRSGIKDENRPIGS-------FLFLGPTGVGKTELAKAL 582
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKV--LVDY-----IYQE 799
A VFG++ +I VD+S + + Q KL G V Y + +
Sbjct: 583 AAAVFGSERNIIRVDMS--EYMDQ-----------VATSKLIGSAPGYVGYEEGGQLSER 629
Query: 800 FRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGK 859
R PYSV+ L++++K A P V + L + + G TDS GR V I + TS + G
Sbjct: 630 VRRNPYSVILLDEVEK-AHPDVFNLLLQVLDEGFLTDSKGRKVDFRNTIIIMTSNL--GS 686
Query: 860 HSVHPQTT 867
S+ T
Sbjct: 687 RSLQEDKT 694
>gi|393784092|ref|ZP_10372259.1| hypothetical protein HMPREF1071_03127 [Bacteroides salyersiae
CL02T12C01]
gi|392666899|gb|EIY60411.1| hypothetical protein HMPREF1071_03127 [Bacteroides salyersiae
CL02T12C01]
Length = 846
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 30/218 (13%)
Query: 686 LRIALAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASA 745
++ +L KV QD AI + +A+ R R+G +D N G ++ FLGP VGK +A
Sbjct: 534 MKESLQSKVIAQDTAIEKLVKAILRSRVGL-KD--PNKPIGTFM-FLGPTGVGKTHLAKE 589
Query: 746 LAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGK--VLVDY-----IYQ 798
LA+ +FG+ LI +D+S F +L G V Y + +
Sbjct: 590 LAKYMFGSSDALIRIDMSEYME-------------KFTVSRLVGAPPGYVGYEEGGQLTE 636
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
+ R KPYS++ L++++K A P V + L + + G+ TDSYGR V + + TS I G
Sbjct: 637 KVRRKPYSIILLDEIEK-AHPDVFNLLLQVMDEGRLTDSYGRMVDFKNTVIIMTSNI--G 693
Query: 859 KHSVHPQTTPVKFSEEIILGAK---RWQMQTAISHGFA 893
+ V F+ + L K R +Q A++ FA
Sbjct: 694 TRQLKDFGRGVGFATQNRLDDKEFSRSVIQKALNKSFA 731
>gi|170757820|ref|YP_001783151.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum B1 str. Okra]
gi|429246823|ref|ZP_19210119.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum CFSAN001628]
gi|169123032|gb|ACA46868.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum B1 str. Okra]
gi|428756157|gb|EKX78733.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum CFSAN001628]
Length = 811
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 35/189 (18%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L +V Q+EAI ++S++V R R+G R +GS FLGP VGK ++ AL
Sbjct: 508 LHNRVIGQEEAIKSVSRSVRRARVGLKDPKRPIGS-------FIFLGPTGVGKTELTKAL 560
Query: 747 AEIVFGNKGKLIHVDVS------SEQRV--SQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
AE +FGN+ +I VD+S S R+ S P + + G L D +
Sbjct: 561 AEAMFGNENNMIRVDMSEYMEKHSVSRLIGSPPGYVGHDE----------GGQLTDKV-- 608
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKG 858
R+ PYSVV ++++KA P V + L + + G+ TD G+ V I + TS + G
Sbjct: 609 --RTNPYSVVLFDEIEKAH-PEVFNILLQILEDGRLTDGKGKTVDFRNTIIIMTSNV--G 663
Query: 859 KHSVHPQTT 867
++ Q T
Sbjct: 664 ASTISRQKT 672
>gi|405374575|ref|ZP_11028954.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Chondromyces
apiculatus DSM 436]
gi|397086740|gb|EJJ17829.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 884
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 22/195 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QDEAI +SQ++ R R G R +GS FLGP VGK ++A L
Sbjct: 575 LHERVIGQDEAIRVLSQSIRRARAGLKDEARPIGS-------FLFLGPTGVGKTELAKTL 627
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE++FG++ LI D+S + + + + G+ + + R +PY
Sbjct: 628 AELLFGDEKALIRFDMSEYMEKHTVSRLVGAPP-GYVGYEEGGQ-----LTEAVRRRPYC 681
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
V+ ++++K A P V L + + G+ TDS G V+ + + TS + G H + T
Sbjct: 682 VLLFDEVEK-AHPDVFHMLLQVLDDGRLTDSQGTVVNFKNTVIICTSNL--GSHLIQEST 738
Query: 867 T---PVKFSEEIILG 878
P + E ++G
Sbjct: 739 ARKEPQERMRERVMG 753
>gi|304405673|ref|ZP_07387332.1| ATPase AAA-2 domain protein [Paenibacillus curdlanolyticus YK9]
gi|304345712|gb|EFM11547.1| ATPase AAA-2 domain protein [Paenibacillus curdlanolyticus YK9]
Length = 822
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q +A+ +S+A+ R R G R +GS FLGP VGK ++A AL
Sbjct: 506 LHDRVIGQTDAVKAVSRAIRRARAGLKDPKRPIGS-------FIFLGPTGVGKTELARAL 558
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ +I +D+ SE S + + G+ + ++ R KPYS
Sbjct: 559 AESIFGDENAVIRIDM-SEYMEKHSTSRLVGAPPGYVGYEEGGQ-----LTEKVRRKPYS 612
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR V + + TS +
Sbjct: 613 VVLLDEIEK-AHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIIMTSNV 660
>gi|418714070|ref|ZP_13274632.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. UI 08452]
gi|410789590|gb|EKR83291.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans str. UI 08452]
gi|455788553|gb|EMF40521.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Lora str. TE 1992]
Length = 846
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 29/182 (15%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVG 738
K LR+ L ++V Q EAI I++AV R R G R GS FLGP VG
Sbjct: 508 KLLRLEEELKKRVVGQTEAIEKIAKAVRRARTGFKSERRPTGS-------FIFLGPTGVG 560
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQN-----IDFCDCKLRGKVLV 793
K ++A ALA +FGN ++ VD+S +P+++ + + D G L
Sbjct: 561 KTELAKALANFLFGNDDAMLRVDMSE---YMEPHAVSRLIGAPPGYVGYDD----GGQLT 613
Query: 794 DYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+++ R KPYS++ L++++KA I + L + + G TD+ GR V+ I + TS
Sbjct: 614 EFV----RKKPYSIILLDEIEKAHHDIF-NILLQIMEEGNLTDTKGRKVNFRDTIIIMTS 668
Query: 854 TI 855
I
Sbjct: 669 NI 670
>gi|423618579|ref|ZP_17594413.1| chaperone ClpB [Bacillus cereus VD115]
gi|401253156|gb|EJR59400.1| chaperone ClpB [Bacillus cereus VD115]
Length = 866
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 19/177 (10%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVG 738
K LR+ L+E+V Q+EA+ +S AV R R G R +GS FLGP VG
Sbjct: 564 KLLRLEQILSERVIGQEEAVSLVSDAVLRARTGIKDPNRPIGS-------FIFLGPTGVG 616
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQ 798
K ++A LA+ +F ++ ++I +D+S + + + + G+ + +
Sbjct: 617 KTELAKTLAQTLFDSEEQMIRIDMSEYMEKHAVSRLIGAPP-GYVGYEEGGQ-----LTE 670
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
R KPYSV+ L++++K A P V + L + + G+ TDS GR V + + TS I
Sbjct: 671 AVRRKPYSVILLDEIEK-AHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNI 726
>gi|398349331|ref|ZP_10534034.1| ATP-dependent protease ClpA [Leptospira broomii str. 5399]
Length = 856
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 27/171 (15%)
Query: 693 KVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
+V QD+AI I++AV R R G R GS FLGP VGK ++A ALA+
Sbjct: 530 RVVGQDDAIEKIAKAVRRARTGFKAERRPTGS-------FIFLGPTGVGKTELAKALADF 582
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQN-----IDFCDCKLRGKVLVDYIYQEFRSKP 804
+FG++ ++ VD+S +P+++ + + D G L +++ R KP
Sbjct: 583 LFGDQDAMLRVDMSE---YMEPHAVSRLIGAPPGYVGYDD----GGQLTEFV----RKKP 631
Query: 805 YSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
YS++ L++++KA I + L + + G TD+ GR V+ I + TS I
Sbjct: 632 YSIILLDEIEKAHHDIF-NILLQVMEEGNLTDTKGRKVNFRDTIIIMTSNI 681
>gi|421876177|ref|ZP_16307736.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE C10]
gi|421879651|ref|ZP_16311113.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE C11]
gi|372557928|emb|CCF23856.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE C10]
gi|390446476|emb|CCF27233.1| ATPase with chaperone activity, ATP-binding subunit [Leuconostoc
citreum LBAE C11]
Length = 706
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 20/176 (11%)
Query: 684 KTLRIALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKK 740
KT+ LA KV QDEA+ +++A+ R R G R +GS F+GP VGK
Sbjct: 417 KTIGQRLAGKVIGQDEAVNMVARAIRRNRAGFDEGNRPIGS-------FLFVGPTGVGKT 469
Query: 741 KIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQN--IDFCDCKLRGKVLVDYIYQ 798
++A LA +FG+K +I +D+S ++ + + I + D + + +
Sbjct: 470 ELAKQLALDMFGSKENIIRLDMSEYSDLTAVSKLIGTTAGYIGYDDNS-------NTLTE 522
Query: 799 EFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATST 854
+ R PYS+V L++++K A+P V + L + + G+ TD G V+ + +ATS
Sbjct: 523 KVRRNPYSIVLLDEIEK-ANPQVLTLLLQVMDDGRLTDGQGNVVNFKNTVIIATSN 577
>gi|422845089|ref|ZP_16891799.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
delbrueckii subsp. lactis DSM 20072]
gi|325684709|gb|EGD26863.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Lactobacillus
delbrueckii subsp. lactis DSM 20072]
Length = 819
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD+A+ ++ A+ R R G R +GS FLGP VGK ++A A+
Sbjct: 510 LHERVIGQDDAVKAVANAIRRSRSGLKDENRPIGS-------FLFLGPTGVGKTELAKAV 562
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE VFG++ +I VD+ SE + +S + + G+ + + R PYS
Sbjct: 563 AEAVFGSEDNIIRVDM-SEYMDRESSSKLIGSAPGYVGYEEGGQ-----LSNKVREHPYS 616
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A+P + + L + + G TDS GR V I + TS +
Sbjct: 617 VVLFDEVEK-ANPEIFNVLLRVLDEGFMTDSLGRKVDFRNTIIIMTSNL 664
>gi|153003502|ref|YP_001377827.1| ATPase [Anaeromyxobacter sp. Fw109-5]
gi|152027075|gb|ABS24843.1| ATPase AAA-2 domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 890
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 17/170 (10%)
Query: 689 ALAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASA 745
AL ++V Q+EA+ +S+AV R R G R +G+ FLGP VGK + A A
Sbjct: 567 ALEKRVVGQEEALRAVSEAVRRARTGLKDPSRPIGT-------FLFLGPTGVGKTETARA 619
Query: 746 LAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPY 805
LAE +F ++ +I D+S Q + + + + GK + + R +PY
Sbjct: 620 LAEYLFNDEEAMIRFDMSEFQERHTVSRLVGAPP-GYVGYEEAGK-----LTEAVRRRPY 673
Query: 806 SVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
SV+ ++++K A P V + L + + G+ TD+ GR VS I V TS +
Sbjct: 674 SVLLFDEIEK-AHPDVFNVLLQLMDDGRLTDAKGRTVSFKNTIVVLTSNV 722
>gi|417768360|ref|ZP_12416290.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Pomona str. Pomona]
gi|418703306|ref|ZP_13264193.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|421114495|ref|ZP_15574913.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|409949577|gb|EKN99551.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Pomona str. Pomona]
gi|410014066|gb|EKO72139.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|410767025|gb|EKR37705.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|455666322|gb|EMF31758.1| negative regulator of genetic competence ClpC/MecB [Leptospira
interrogans serovar Pomona str. Fox 32256]
Length = 846
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 29/182 (15%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVG 738
K LR+ L ++V Q EAI I++AV R R G R GS FLGP VG
Sbjct: 508 KLLRLEEELKKRVVGQTEAIEKIAKAVRRARTGFKSERRPTGS-------FIFLGPTGVG 560
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQN-----IDFCDCKLRGKVLV 793
K ++A ALA +FGN ++ VD+S +P+++ + + D G L
Sbjct: 561 KTELAKALANFLFGNDDAMLRVDMSE---YMEPHAVSRLIGAPPGYVGYDD----GGQLT 613
Query: 794 DYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+++ R KPYS++ L++++KA I + L + + G TD+ GR V+ I + TS
Sbjct: 614 EFV----RKKPYSIILLDEIEKAHHDIF-NILLQIMEEGNLTDTKGRKVNFRDTIIIMTS 668
Query: 854 TI 855
I
Sbjct: 669 NI 670
>gi|407717970|ref|YP_006795375.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Leuconostoc
carnosum JB16]
gi|407241726|gb|AFT81376.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Leuconostoc
carnosum JB16]
Length = 688
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 21/187 (11%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L++ V QD A+ T+S+A+ R RIG +GR +GS F+GP VGK ++A L
Sbjct: 391 LSKHVIGQDSAVQTVSKAIRRNRIGLTKSGRPIGS-------FLFVGPTGVGKTELAKQL 443
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
A+ +FG+K LI D+S + + + + G+ + ++ R PYS
Sbjct: 444 AKEMFGSKDALIRFDMSEYMEKHSVSKMIGAP-AGYIGYEEAGQ-----LTEQVRRHPYS 497
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSVHPQT 866
+V +++++K A P V + + + G+ TD+ G VS + + TS S
Sbjct: 498 LVLIDEIEK-AHPDVMNMFLQILDDGRLTDAQGHIVSFKDTVIIMTSN----AGSTDTGN 552
Query: 867 TPVKFSE 873
TPV F++
Sbjct: 553 TPVGFNQ 559
>gi|410451385|ref|ZP_11305400.1| negative regulator of genetic competence ClpC/MecB [Leptospira sp.
Fiocruz LV3954]
gi|410014886|gb|EKO77003.1| negative regulator of genetic competence ClpC/MecB [Leptospira sp.
Fiocruz LV3954]
Length = 848
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 29/182 (15%)
Query: 684 KTLRIA--LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVG 738
K LR+ L ++V Q+EAI I++AV R R G R GS FLGP VG
Sbjct: 512 KLLRLEDELKKRVVGQEEAIEKIAKAVRRARTGFKSERRPTGS-------FIFLGPTGVG 564
Query: 739 KKKIASALAEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQN-----IDFCDCKLRGKVLV 793
K ++A ALA +FGN ++ VD+S +P+++ + + D G L
Sbjct: 565 KTELAKALANFLFGNDDAMLRVDMSE---YMEPHAVSRLIGAPPGYVGYDD----GGQLT 617
Query: 794 DYIYQEFRSKPYSVVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATS 853
+++ R +PYS++ L++++KA I + L + + G TD+ GR V+ I + TS
Sbjct: 618 EFV----RKRPYSIILLDEIEKAHHDIF-NILLQIMEEGNLTDTKGRKVNFRDTIIIMTS 672
Query: 854 TI 855
I
Sbjct: 673 NI 674
>gi|340356550|ref|ZP_08679194.1| ATP-dependent Clp protease [Sporosarcina newyorkensis 2681]
gi|339620999|gb|EGQ25565.1| ATP-dependent Clp protease [Sporosarcina newyorkensis 2681]
Length = 707
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L ++V Q EA+ I++A+ R R G R +GS F+GP VGK +I L
Sbjct: 417 LGKQVIGQAEAVDKIAKAIRRSRAGLKSKDRPIGS-------FLFVGPTGVGKTEITKVL 469
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +FG++ LI +D+S + I + + G+ + ++ R PYS
Sbjct: 470 AEELFGSRDALIRLDMSEYMEKHAVSKIIGSPP-GYVGHEEAGQ-----LTEQIRRNPYS 523
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTILKGKHSV 862
++ L++++K A P VQ+ + + G+ TDS+GR VS + + TS G V
Sbjct: 524 ILLLDEIEK-AHPDVQNMFLQIMEDGRLTDSHGRTVSFKDTVIIMTSNAGTGVKKV 578
>gi|256397471|ref|YP_003119035.1| ATPase AAA [Catenulispora acidiphila DSM 44928]
gi|256363697|gb|ACU77194.1| ATPase AAA-2 domain protein [Catenulispora acidiphila DSM 44928]
Length = 850
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 11/166 (6%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGNGRDVGSNSKRGIWLAFLGPDKVGKKKIASALAEI 749
L ++V Q++AI +SQA+ R R G + + G F GP VGK ++A ALAE
Sbjct: 512 LHKRVIGQNQAIKGLSQAIRRTRAG----LKDPKRPGGSFIFAGPSGVGKTELAKALAEF 567
Query: 750 VFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYSVVF 809
+FG++ LI +D+S + +F + + G+ + ++ R KP+SVV
Sbjct: 568 LFGDEDALIQLDMSEFSEKHTVSRLFGSPP-GYVGYEEGGQ-----LTEKVRRKPFSVVL 621
Query: 810 LEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
++++K A P + +SL + + G+ TDS GR V + + T+ +
Sbjct: 622 FDEVEK-AHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNL 666
>gi|116513529|ref|YP_812435.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|418029954|ref|ZP_12668471.1| hypothetical protein LDBUL1632_01265 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|116092844|gb|ABJ57997.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|354688417|gb|EHE88456.1| hypothetical protein LDBUL1632_01265 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 819
Score = 74.3 bits (181), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIG---NGRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V QD+A+ ++ A+ R R G R +GS FLGP VGK ++A A+
Sbjct: 510 LHERVIGQDDAVKAVANAIRRSRSGLKDENRPIGS-------FLFLGPTGVGKTELAKAV 562
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE VFG++ +I VD+ SE + +S + + G+ + + R PYS
Sbjct: 563 AEAVFGSEDNIIRVDM-SEYMDRESSSKLIGSAPGYVGYEEGGQ-----LSNKVREHPYS 616
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV ++++K A+P + + L + + G TDS GR V I + TS +
Sbjct: 617 VVLFDEVEK-ANPEIFNVLLRVLDEGFMTDSLGRKVDFRNTIIIMTSNL 664
>gi|428780885|ref|YP_007172671.1| ATP-dependent chaperone ClpB [Dactylococcopsis salina PCC 8305]
gi|428695164|gb|AFZ51314.1| ATP-dependent chaperone ClpB [Dactylococcopsis salina PCC 8305]
Length = 894
Score = 74.3 bits (181), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 17/169 (10%)
Query: 690 LAEKVGWQDEAICTISQAVSRWRIGN---GRDVGSNSKRGIWLAFLGPDKVGKKKIASAL 746
L E+V Q EA+ +S A+ R R G R +GS F+GP VGK ++A A+
Sbjct: 589 LHERVIGQKEAVSAVSAAIRRARAGMKDPARPIGS-------FLFMGPTGVGKTELARAM 641
Query: 747 AEIVFGNKGKLIHVDVSSEQRVSQPNSIFDCQNIDFCDCKLRGKVLVDYIYQEFRSKPYS 806
AE +F + LI +D+S + + + + G+ + ++ R +PYS
Sbjct: 642 AEFLFDTEESLIRIDMSEYMEKHSVSRLVGAPP-GYVGYEEGGQ-----LSEQIRRRPYS 695
Query: 807 VVFLEDLDKAADPIVQSSLTKAISTGKFTDSYGRDVSISGMIFVATSTI 855
VV L++++K A P V + L + + G+ TDS GR + I V TS I
Sbjct: 696 VVLLDEVEK-AHPDVFNILLQVLDDGRITDSQGRVIDFRNTIIVMTSNI 743
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,663,075,053
Number of Sequences: 23463169
Number of extensions: 701685261
Number of successful extensions: 1876514
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 10354
Number of HSP's that attempted gapping in prelim test: 1856097
Number of HSP's gapped (non-prelim): 18499
length of query: 1093
length of database: 8,064,228,071
effective HSP length: 154
effective length of query: 939
effective length of database: 8,745,867,341
effective search space: 8212369433199
effective search space used: 8212369433199
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 83 (36.6 bits)