Query 001356
Match_columns 1093
No_of_seqs 539 out of 3878
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 23:55:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001356.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001356hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cmm_A Ubiquitin-activating en 100.0 9E-216 3E-220 2018.2 86.4 998 84-1092 3-1015(1015)
2 1y8q_B Anthracycline-, ubiquit 100.0 1E-101 5E-106 930.5 29.6 516 491-1077 3-534 (640)
3 1z7l_A Ubiquitin-activating en 100.0 2E-69 6.8E-74 592.9 24.9 268 661-935 9-276 (276)
4 1tt5_A APPBP1, amyloid protein 100.0 5.5E-64 1.9E-68 600.5 14.5 379 85-471 8-525 (531)
5 1y8q_A Ubiquitin-like 1 activa 100.0 1E-59 3.5E-64 538.3 25.7 322 83-472 11-338 (346)
6 1tt5_B Ubiquitin-activating en 100.0 1.5E-56 5.1E-61 523.7 23.2 360 486-1054 7-408 (434)
7 2nvu_B Maltose binding protein 100.0 5.5E-53 1.9E-57 534.3 27.2 358 488-1054 393-779 (805)
8 1y8q_A Ubiquitin-like 1 activa 100.0 1.8E-35 6.2E-40 337.9 21.6 165 485-660 16-180 (346)
9 1tt5_A APPBP1, amyloid protein 100.0 1.2E-35 4E-40 355.8 9.9 190 485-684 12-201 (531)
10 1tt5_B Ubiquitin-activating en 100.0 8.2E-33 2.8E-37 323.4 22.6 282 89-471 7-322 (434)
11 3h8v_A Ubiquitin-like modifier 100.0 6.9E-34 2.3E-38 315.7 12.7 165 485-658 13-193 (292)
12 1zud_1 Adenylyltransferase THI 100.0 7.7E-33 2.6E-37 303.1 13.4 165 485-658 6-173 (251)
13 2nvu_B Maltose binding protein 100.0 9.2E-31 3.1E-35 331.2 24.7 277 95-471 397-693 (805)
14 1jw9_B Molybdopterin biosynthe 100.0 1.6E-31 5.6E-36 292.3 12.9 164 486-658 10-176 (249)
15 3h5n_A MCCB protein; ubiquitin 100.0 1.6E-30 5.6E-35 297.8 16.9 165 485-658 92-264 (353)
16 1y8q_B Anthracycline-, ubiquit 100.0 9.1E-30 3.1E-34 307.0 22.0 147 94-242 3-154 (640)
17 1zud_1 Adenylyltransferase THI 100.0 1.4E-29 4.7E-34 277.3 17.5 153 84-238 2-160 (251)
18 3rui_A Ubiquitin-like modifier 100.0 7.7E-30 2.6E-34 287.4 12.3 160 493-658 22-199 (340)
19 3cmm_A Ubiquitin-activating en 100.0 3.7E-30 1.3E-34 326.2 9.5 185 484-686 6-193 (1015)
20 1jw9_B Molybdopterin biosynthe 100.0 5.1E-28 1.7E-32 264.6 17.0 155 83-239 4-164 (249)
21 3h8v_A Ubiquitin-like modifier 100.0 4.8E-28 1.6E-32 268.8 16.1 148 90-240 15-183 (292)
22 4gsl_A Ubiquitin-like modifier 99.9 1.8E-28 6.2E-33 292.2 12.3 160 493-658 314-491 (615)
23 3vh1_A Ubiquitin-like modifier 99.9 3.2E-28 1.1E-32 290.3 14.1 167 486-658 301-492 (598)
24 3h5n_A MCCB protein; ubiquitin 99.9 3.2E-27 1.1E-31 270.5 14.1 152 84-237 88-250 (353)
25 3rui_A Ubiquitin-like modifier 99.9 2.8E-25 9.7E-30 250.3 14.1 154 85-241 11-183 (340)
26 3vh1_A Ubiquitin-like modifier 99.9 6.6E-25 2.3E-29 261.8 14.1 154 83-239 295-474 (598)
27 4gsl_A Ubiquitin-like modifier 99.9 2.1E-25 7.3E-30 265.9 8.3 146 93-241 311-475 (615)
28 2v31_A Ubiquitin-activating en 99.9 5.3E-25 1.8E-29 208.3 5.4 111 239-350 1-111 (112)
29 1z7l_A Ubiquitin-activating en 98.4 5E-07 1.7E-11 99.2 9.9 55 756-819 207-263 (276)
30 3dfz_A SIRC, precorrin-2 dehyd 97.2 0.00055 1.9E-08 73.0 8.5 99 105-232 28-126 (223)
31 3jyo_A Quinate/shikimate dehyd 97.0 0.001 3.6E-08 73.5 8.2 79 105-202 124-202 (283)
32 1y8x_B Ubiquitin-activating en 96.9 0.00045 1.6E-08 63.7 3.0 53 1002-1054 9-72 (98)
33 3jyo_A Quinate/shikimate dehyd 96.8 0.0013 4.4E-08 72.8 6.8 79 502-612 124-202 (283)
34 1kyq_A Met8P, siroheme biosynt 96.6 0.0055 1.9E-07 67.2 9.5 118 105-232 10-145 (274)
35 3ic5_A Putative saccharopine d 96.6 0.0035 1.2E-07 58.5 6.9 95 505-635 5-99 (118)
36 1pjq_A CYSG, siroheme synthase 96.6 0.01 3.4E-07 70.1 12.4 100 105-232 9-108 (457)
37 3dfz_A SIRC, precorrin-2 dehyd 96.6 0.0029 1E-07 67.4 7.0 92 502-633 28-119 (223)
38 3ic5_A Putative saccharopine d 96.3 0.022 7.5E-07 52.9 10.6 89 108-226 5-98 (118)
39 3llv_A Exopolyphosphatase-rela 96.2 0.027 9.3E-07 54.6 11.1 92 106-227 4-101 (141)
40 2g1u_A Hypothetical protein TM 96.1 0.022 7.6E-07 56.5 10.2 99 104-229 15-118 (155)
41 3llv_A Exopolyphosphatase-rela 96.1 0.017 5.8E-07 56.1 9.0 93 504-631 5-97 (141)
42 3t4e_A Quinate/shikimate dehyd 96.0 0.016 5.4E-07 64.8 9.3 80 106-202 146-228 (312)
43 3tnl_A Shikimate dehydrogenase 96.0 0.02 6.7E-07 64.2 9.8 80 106-202 152-234 (315)
44 2hmt_A YUAA protein; RCK, KTN, 95.9 0.036 1.2E-06 53.3 10.5 88 104-219 2-96 (144)
45 2g1u_A Hypothetical protein TM 95.7 0.023 7.9E-07 56.4 8.4 94 500-627 14-107 (155)
46 2hmt_A YUAA protein; RCK, KTN, 95.7 0.021 7.2E-07 55.0 7.8 36 502-543 3-38 (144)
47 3tum_A Shikimate dehydrogenase 95.6 0.026 8.9E-07 61.8 8.8 73 106-202 123-195 (269)
48 1id1_A Putative potassium chan 95.6 0.02 6.9E-07 56.6 7.2 88 107-219 2-96 (153)
49 3tnl_A Shikimate dehydrogenase 95.4 0.025 8.5E-07 63.3 8.1 83 503-612 152-234 (315)
50 1lss_A TRK system potassium up 95.3 0.071 2.4E-06 51.0 9.8 84 109-219 5-94 (140)
51 1lss_A TRK system potassium up 95.3 0.027 9.3E-07 54.0 6.7 88 506-627 5-92 (140)
52 1kyq_A Met8P, siroheme biosynt 95.1 0.018 6.3E-07 63.1 5.4 110 502-633 10-138 (274)
53 2ph5_A Homospermidine synthase 95.0 0.037 1.3E-06 64.9 7.9 102 505-638 13-116 (480)
54 3e8x_A Putative NAD-dependent 94.9 0.032 1.1E-06 58.9 6.8 37 500-542 16-53 (236)
55 3t4e_A Quinate/shikimate dehyd 94.9 0.046 1.6E-06 61.0 8.2 84 503-613 146-229 (312)
56 3pwz_A Shikimate dehydrogenase 94.9 0.043 1.5E-06 60.1 7.8 72 106-203 118-190 (272)
57 1pjq_A CYSG, siroheme synthase 94.8 0.041 1.4E-06 64.8 8.0 91 503-632 10-100 (457)
58 3tum_A Shikimate dehydrogenase 94.8 0.044 1.5E-06 59.9 7.5 73 503-612 123-195 (269)
59 3abi_A Putative uncharacterize 94.6 0.048 1.6E-06 62.2 7.5 94 504-636 15-108 (365)
60 3abi_A Putative uncharacterize 94.6 0.022 7.7E-07 64.9 4.8 90 107-227 15-107 (365)
61 3o8q_A Shikimate 5-dehydrogena 94.6 0.057 2E-06 59.4 7.8 73 106-203 124-196 (281)
62 3fwz_A Inner membrane protein 94.6 0.15 5.1E-06 49.6 10.0 85 108-220 7-97 (140)
63 4ina_A Saccharopine dehydrogen 94.5 0.061 2.1E-06 62.3 8.3 103 506-635 2-106 (405)
64 3c85_A Putative glutathione-re 94.5 0.095 3.2E-06 53.2 8.9 87 106-220 37-131 (183)
65 1id1_A Putative potassium chan 94.4 0.047 1.6E-06 53.9 6.0 94 504-628 2-95 (153)
66 3oj0_A Glutr, glutamyl-tRNA re 94.4 0.041 1.4E-06 53.8 5.5 71 107-204 20-90 (144)
67 2egg_A AROE, shikimate 5-dehyd 94.4 0.038 1.3E-06 61.3 5.8 35 106-140 139-173 (297)
68 3qsg_A NAD-binding phosphogluc 94.3 0.12 4.2E-06 57.4 9.9 35 107-141 23-57 (312)
69 3gvi_A Malate dehydrogenase; N 94.3 0.096 3.3E-06 58.8 8.9 77 105-203 4-84 (324)
70 4ina_A Saccharopine dehydrogen 94.3 0.13 4.4E-06 59.5 10.3 95 109-226 2-105 (405)
71 3l4b_C TRKA K+ channel protien 94.2 0.062 2.1E-06 56.3 6.9 88 506-627 1-88 (218)
72 3l4b_C TRKA K+ channel protien 94.0 0.14 4.6E-06 53.7 8.9 93 110-230 2-100 (218)
73 3pwz_A Shikimate dehydrogenase 94.0 0.049 1.7E-06 59.7 5.6 73 503-613 118-190 (272)
74 3e8x_A Putative NAD-dependent 93.9 0.3 1E-05 51.3 11.4 102 102-231 15-133 (236)
75 2z2v_A Hypothetical protein PH 93.8 0.055 1.9E-06 61.8 5.8 91 106-227 14-107 (365)
76 1hyh_A L-hicdh, L-2-hydroxyiso 93.7 0.35 1.2E-05 53.6 12.0 73 109-204 2-79 (309)
77 3o8q_A Shikimate 5-dehydrogena 93.6 0.071 2.4E-06 58.7 6.1 74 503-614 124-197 (281)
78 2d4a_B Malate dehydrogenase; a 93.6 0.33 1.1E-05 54.0 11.6 71 110-202 1-75 (308)
79 3oj0_A Glutr, glutamyl-tRNA re 93.5 0.039 1.3E-06 54.0 3.3 37 500-542 16-52 (144)
80 3onh_A Ubiquitin-activating en 93.5 0.092 3.1E-06 50.2 5.6 45 1007-1054 19-67 (127)
81 3ruf_A WBGU; rossmann fold, UD 93.3 0.41 1.4E-05 53.3 11.9 110 104-234 21-156 (351)
82 3p7m_A Malate dehydrogenase; p 93.3 0.16 5.6E-06 56.9 8.5 75 106-202 3-81 (321)
83 3h2s_A Putative NADH-flavin re 93.2 0.11 3.8E-06 53.9 6.7 94 506-637 1-105 (224)
84 3don_A Shikimate dehydrogenase 93.2 0.16 5.6E-06 55.6 8.2 108 105-226 114-231 (277)
85 3rku_A Oxidoreductase YMR226C; 93.2 0.32 1.1E-05 53.3 10.6 90 498-611 26-122 (287)
86 3d0o_A L-LDH 1, L-lactate dehy 93.0 0.27 9.2E-06 54.9 9.8 78 103-203 1-83 (317)
87 3t4x_A Oxidoreductase, short c 93.0 0.14 4.7E-06 55.4 7.2 83 503-612 8-93 (267)
88 3gpi_A NAD-dependent epimerase 93.0 0.21 7.1E-06 54.1 8.6 99 504-642 2-114 (286)
89 3dqp_A Oxidoreductase YLBE; al 93.0 0.2 6.9E-06 52.0 8.2 95 506-637 1-106 (219)
90 1npy_A Hypothetical shikimate 92.8 0.18 6.2E-06 55.1 7.7 67 107-203 118-184 (271)
91 2z2v_A Hypothetical protein PH 92.8 0.16 5.6E-06 57.9 7.6 94 504-636 15-108 (365)
92 1ldn_A L-lactate dehydrogenase 92.8 0.37 1.3E-05 53.8 10.4 72 108-202 6-82 (316)
93 1hdo_A Biliverdin IX beta redu 92.8 0.29 1E-05 49.7 8.9 34 108-142 3-37 (206)
94 3don_A Shikimate dehydrogenase 92.7 0.11 3.6E-06 57.2 5.7 38 502-544 114-151 (277)
95 3dhn_A NAD-dependent epimerase 92.7 0.21 7.1E-06 52.0 7.7 97 506-639 5-114 (227)
96 3doj_A AT3G25530, dehydrogenas 92.7 0.13 4.4E-06 57.2 6.4 34 504-543 20-53 (310)
97 2raf_A Putative dinucleotide-b 92.6 0.18 6E-06 52.7 7.0 37 501-543 15-51 (209)
98 3vku_A L-LDH, L-lactate dehydr 92.6 0.25 8.7E-06 55.4 8.7 75 106-203 7-85 (326)
99 2b69_A UDP-glucuronate decarbo 92.4 0.37 1.3E-05 53.6 9.8 105 105-234 24-146 (343)
100 2aef_A Calcium-gated potassium 92.4 0.25 8.7E-06 52.1 8.0 92 107-229 8-105 (234)
101 3dhn_A NAD-dependent epimerase 92.4 0.53 1.8E-05 48.8 10.4 95 109-233 5-116 (227)
102 2hk9_A Shikimate dehydrogenase 92.4 0.27 9.3E-06 53.6 8.4 35 105-140 126-160 (275)
103 2ewd_A Lactate dehydrogenase,; 92.3 0.54 1.9E-05 52.3 11.0 33 109-141 5-37 (317)
104 1oju_A MDH, malate dehydrogena 92.3 0.41 1.4E-05 52.9 9.9 72 110-203 2-78 (294)
105 3pqe_A L-LDH, L-lactate dehydr 92.2 0.31 1.1E-05 54.7 8.8 75 108-203 5-82 (326)
106 4g65_A TRK system potassium up 92.2 0.08 2.7E-06 62.4 4.2 93 505-631 3-96 (461)
107 4aj2_A L-lactate dehydrogenase 92.2 0.22 7.6E-06 56.0 7.5 78 104-203 15-96 (331)
108 1p9l_A Dihydrodipicolinate red 92.1 0.19 6.4E-06 54.2 6.7 75 507-640 2-79 (245)
109 4ezb_A Uncharacterized conserv 92.1 0.44 1.5E-05 53.1 9.8 84 108-214 24-107 (317)
110 2raf_A Putative dinucleotide-b 92.0 0.39 1.3E-05 50.1 8.8 37 104-141 15-51 (209)
111 3o38_A Short chain dehydrogena 91.9 0.24 8.3E-06 53.2 7.3 63 503-591 20-84 (266)
112 3slg_A PBGP3 protein; structur 91.9 0.088 3E-06 59.4 4.0 110 500-643 19-147 (372)
113 3gpi_A NAD-dependent epimerase 91.9 0.32 1.1E-05 52.6 8.3 95 107-234 2-114 (286)
114 2h78_A Hibadh, 3-hydroxyisobut 91.9 0.36 1.2E-05 53.0 8.8 32 506-543 4-35 (302)
115 1hdo_A Biliverdin IX beta redu 91.9 0.26 9E-06 50.0 7.2 33 505-543 3-36 (206)
116 4e21_A 6-phosphogluconate dehy 91.9 0.28 9.4E-06 55.8 8.0 115 106-231 20-143 (358)
117 3tl2_A Malate dehydrogenase; c 91.8 0.39 1.3E-05 53.7 8.9 77 106-202 6-86 (315)
118 4id9_A Short-chain dehydrogena 91.7 0.3 1E-05 54.3 8.0 39 102-141 13-52 (347)
119 2x0j_A Malate dehydrogenase; o 91.6 0.63 2.1E-05 51.4 10.2 72 110-203 2-78 (294)
120 2hjr_A Malate dehydrogenase; m 91.6 0.77 2.6E-05 51.5 11.1 74 107-202 13-90 (328)
121 3rku_A Oxidoreductase YMR226C; 91.5 0.83 2.8E-05 49.9 11.2 68 102-188 27-97 (287)
122 2v6b_A L-LDH, L-lactate dehydr 91.5 0.8 2.7E-05 50.7 11.1 71 110-203 2-76 (304)
123 4id9_A Short-chain dehydrogena 91.5 0.19 6.5E-06 56.0 6.0 39 499-543 13-52 (347)
124 1gpj_A Glutamyl-tRNA reductase 91.4 0.28 9.7E-06 56.6 7.6 71 106-203 165-236 (404)
125 3l9w_A Glutathione-regulated p 91.4 0.38 1.3E-05 55.8 8.6 85 108-220 4-94 (413)
126 4ezb_A Uncharacterized conserv 91.4 0.48 1.6E-05 52.8 9.2 99 504-638 23-123 (317)
127 3ldh_A Lactate dehydrogenase; 91.4 0.51 1.7E-05 53.0 9.3 74 107-202 20-97 (330)
128 4egb_A DTDP-glucose 4,6-dehydr 91.3 0.26 9E-06 54.8 7.0 37 502-542 21-58 (346)
129 3slg_A PBGP3 protein; structur 91.3 0.22 7.4E-06 56.2 6.3 106 101-235 17-147 (372)
130 4e12_A Diketoreductase; oxidor 91.2 0.73 2.5E-05 50.3 10.3 32 109-141 5-36 (283)
131 1xg5_A ARPG836; short chain de 91.2 0.48 1.7E-05 51.2 8.8 86 502-612 29-119 (279)
132 4egb_A DTDP-glucose 4,6-dehydr 91.2 0.35 1.2E-05 53.8 7.8 106 106-234 22-154 (346)
133 1ur5_A Malate dehydrogenase; o 91.2 1 3.4E-05 50.1 11.5 73 109-203 3-79 (309)
134 3gvi_A Malate dehydrogenase; N 91.1 0.34 1.2E-05 54.3 7.6 36 503-543 5-40 (324)
135 3qsg_A NAD-binding phosphogluc 91.1 0.54 1.9E-05 52.2 9.3 34 505-543 24-57 (312)
136 3lf2_A Short chain oxidoreduct 91.1 0.41 1.4E-05 51.6 8.0 85 503-612 6-95 (265)
137 3ruf_A WBGU; rossmann fold, UD 91.1 0.44 1.5E-05 53.1 8.5 115 500-642 20-156 (351)
138 3o26_A Salutaridine reductase; 91.1 0.32 1.1E-05 53.0 7.3 85 502-612 9-99 (311)
139 3m2p_A UDP-N-acetylglucosamine 91.0 0.34 1.2E-05 53.1 7.3 98 505-642 2-114 (311)
140 3d1l_A Putative NADP oxidoredu 91.0 0.62 2.1E-05 50.1 9.3 81 106-214 8-88 (266)
141 3tri_A Pyrroline-5-carboxylate 90.8 0.58 2E-05 51.2 9.0 81 107-215 2-84 (280)
142 3ius_A Uncharacterized conserv 90.8 0.7 2.4E-05 49.7 9.6 96 505-642 5-108 (286)
143 3l9w_A Glutathione-regulated p 90.8 0.19 6.6E-06 58.3 5.3 90 505-629 4-93 (413)
144 2pzm_A Putative nucleotide sug 90.8 0.32 1.1E-05 54.0 6.9 36 502-543 17-53 (330)
145 1a5z_A L-lactate dehydrogenase 90.8 0.69 2.3E-05 51.6 9.7 71 110-203 2-76 (319)
146 1iy8_A Levodione reductase; ox 90.7 0.47 1.6E-05 51.0 8.0 85 503-612 11-100 (267)
147 3hg7_A D-isomer specific 2-hyd 90.6 0.33 1.1E-05 54.4 6.9 37 502-544 137-173 (324)
148 3dqp_A Oxidoreductase YLBE; al 90.6 0.81 2.8E-05 47.3 9.6 91 110-231 2-108 (219)
149 1sb8_A WBPP; epimerase, 4-epim 90.6 0.33 1.1E-05 54.2 7.0 35 502-542 24-59 (352)
150 1nyt_A Shikimate 5-dehydrogena 90.6 0.48 1.6E-05 51.5 8.0 34 106-140 117-150 (271)
151 3qiv_A Short-chain dehydrogena 90.6 0.47 1.6E-05 50.4 7.8 63 502-591 6-69 (253)
152 3ew7_A LMO0794 protein; Q8Y8U8 90.5 0.77 2.6E-05 47.2 9.2 31 506-542 1-32 (221)
153 1lld_A L-lactate dehydrogenase 90.5 0.81 2.8E-05 50.6 10.0 74 108-203 7-84 (319)
154 1p77_A Shikimate 5-dehydrogena 90.5 0.49 1.7E-05 51.5 8.0 72 106-203 117-189 (272)
155 3fwz_A Inner membrane protein 90.5 0.17 6E-06 49.1 4.0 86 505-625 7-92 (140)
156 3qvo_A NMRA family protein; st 90.5 0.84 2.9E-05 48.0 9.7 99 108-234 23-130 (236)
157 4gbj_A 6-phosphogluconate dehy 90.4 1.4 4.7E-05 48.7 11.6 109 108-231 5-125 (297)
158 1y1p_A ARII, aldehyde reductas 90.4 1.5 5.1E-05 48.2 12.0 107 106-234 9-137 (342)
159 1y1p_A ARII, aldehyde reductas 90.4 0.8 2.7E-05 50.4 9.8 81 503-612 9-91 (342)
160 3nyw_A Putative oxidoreductase 90.4 0.35 1.2E-05 51.7 6.6 65 502-591 4-70 (250)
161 3obb_A Probable 3-hydroxyisobu 90.3 1.4 4.9E-05 48.6 11.7 110 109-231 4-125 (300)
162 3pdu_A 3-hydroxyisobutyrate de 90.3 0.72 2.5E-05 50.3 9.2 32 506-543 2-33 (287)
163 3evt_A Phosphoglycerate dehydr 90.2 0.41 1.4E-05 53.7 7.2 36 502-543 134-169 (324)
164 3pp8_A Glyoxylate/hydroxypyruv 90.2 0.32 1.1E-05 54.3 6.3 35 503-543 137-171 (315)
165 1nvt_A Shikimate 5'-dehydrogen 90.1 0.32 1.1E-05 53.3 6.2 75 105-203 125-202 (287)
166 4g65_A TRK system potassium up 90.0 0.41 1.4E-05 56.3 7.3 95 505-633 235-329 (461)
167 3m2p_A UDP-N-acetylglucosamine 89.8 1.4 4.8E-05 48.1 11.1 94 108-234 2-114 (311)
168 3d1l_A Putative NADP oxidoredu 89.8 0.33 1.1E-05 52.3 5.9 93 503-636 8-102 (266)
169 3dtt_A NADP oxidoreductase; st 89.8 1.2 4.1E-05 47.5 10.2 39 103-142 14-52 (245)
170 1ez4_A Lactate dehydrogenase; 89.8 1.1 3.6E-05 50.1 10.1 72 109-203 6-81 (318)
171 2axq_A Saccharopine dehydrogen 89.8 0.36 1.2E-05 56.9 6.6 99 502-635 20-118 (467)
172 1lu9_A Methylene tetrahydromet 89.7 0.42 1.4E-05 52.3 6.7 80 503-613 117-197 (287)
173 2hjr_A Malate dehydrogenase; m 89.7 0.7 2.4E-05 51.8 8.6 36 503-543 12-47 (328)
174 2ph5_A Homospermidine synthase 89.7 1 3.5E-05 52.8 10.2 92 108-227 13-113 (480)
175 1t2d_A LDH-P, L-lactate dehydr 89.7 1 3.4E-05 50.4 9.9 72 109-202 5-80 (322)
176 3phh_A Shikimate dehydrogenase 89.6 0.21 7.3E-06 54.5 4.1 33 108-141 118-150 (269)
177 3rkr_A Short chain oxidoreduct 89.5 0.28 9.4E-06 52.8 4.9 63 502-591 26-89 (262)
178 3c85_A Putative glutathione-re 89.5 0.2 6.7E-06 50.8 3.5 35 503-543 37-72 (183)
179 3ioy_A Short-chain dehydrogena 89.4 0.44 1.5E-05 53.0 6.7 64 503-591 6-70 (319)
180 3pef_A 6-phosphogluconate dehy 89.4 0.44 1.5E-05 52.0 6.6 32 506-543 2-33 (287)
181 2b69_A UDP-glucuronate decarbo 89.4 0.65 2.2E-05 51.6 8.0 36 501-542 23-59 (343)
182 1sby_A Alcohol dehydrogenase; 89.4 0.63 2.2E-05 49.5 7.6 84 503-612 3-92 (254)
183 2pzm_A Putative nucleotide sug 89.3 0.93 3.2E-05 50.1 9.2 36 105-141 17-53 (330)
184 1lu9_A Methylene tetrahydromet 89.3 0.7 2.4E-05 50.5 8.1 34 106-140 117-151 (287)
185 3ko8_A NAD-dependent epimerase 89.3 0.55 1.9E-05 51.2 7.3 31 506-542 1-32 (312)
186 3qvo_A NMRA family protein; st 89.2 0.69 2.4E-05 48.6 7.7 102 503-640 21-128 (236)
187 2bka_A CC3, TAT-interacting pr 89.2 0.89 3.1E-05 47.6 8.5 38 502-543 15-53 (242)
188 2gf2_A Hibadh, 3-hydroxyisobut 89.1 0.45 1.5E-05 51.9 6.4 31 506-542 1-31 (296)
189 3r6d_A NAD-dependent epimerase 89.1 0.55 1.9E-05 48.7 6.8 75 506-613 6-82 (221)
190 2pv7_A T-protein [includes: ch 89.1 0.74 2.5E-05 50.7 8.1 32 506-543 22-54 (298)
191 3i6i_A Putative leucoanthocyan 89.1 0.78 2.7E-05 51.1 8.5 101 503-632 8-114 (346)
192 2gn4_A FLAA1 protein, UDP-GLCN 89.0 1.6 5.4E-05 48.9 10.9 100 106-229 19-142 (344)
193 3ius_A Uncharacterized conserv 89.0 1.6 5.4E-05 46.9 10.6 97 108-234 5-108 (286)
194 2z1n_A Dehydrogenase; reductas 88.9 0.81 2.8E-05 48.9 8.1 34 503-542 5-39 (260)
195 3p7m_A Malate dehydrogenase; p 88.9 0.53 1.8E-05 52.7 6.8 35 504-543 4-38 (321)
196 3vps_A TUNA, NAD-dependent epi 88.9 0.4 1.4E-05 52.4 5.8 37 502-544 4-41 (321)
197 3sxp_A ADP-L-glycero-D-mannohe 88.9 0.58 2E-05 52.5 7.2 35 503-543 8-45 (362)
198 3fi9_A Malate dehydrogenase; s 88.8 0.5 1.7E-05 53.4 6.5 77 106-203 6-85 (343)
199 2cvz_A Dehydrogenase, 3-hydrox 88.8 1.2 4.1E-05 48.2 9.4 87 506-637 2-91 (289)
200 2x6t_A ADP-L-glycero-D-manno-h 88.7 1.1 3.7E-05 50.1 9.3 39 103-141 41-80 (357)
201 1sb8_A WBPP; epimerase, 4-epim 88.7 1.7 5.7E-05 48.4 10.8 110 106-234 25-158 (352)
202 1ks9_A KPA reductase;, 2-dehyd 88.7 1.3 4.4E-05 47.8 9.6 32 110-142 2-33 (291)
203 3nep_X Malate dehydrogenase; h 88.6 1.1 3.9E-05 49.8 9.3 72 110-203 2-78 (314)
204 2zqz_A L-LDH, L-lactate dehydr 88.6 1.2 4.1E-05 49.9 9.5 74 107-203 8-85 (326)
205 3nzo_A UDP-N-acetylglucosamine 88.6 4.1 0.00014 46.6 14.2 106 104-229 31-165 (399)
206 3tri_A Pyrroline-5-carboxylate 88.6 0.21 7.2E-06 54.7 3.2 35 505-542 3-37 (280)
207 3i1j_A Oxidoreductase, short c 88.5 0.61 2.1E-05 49.3 6.7 36 502-543 11-47 (247)
208 3tjr_A Short chain dehydrogena 88.5 0.76 2.6E-05 50.5 7.7 83 503-612 29-116 (301)
209 1ff9_A Saccharopine reductase; 88.5 0.74 2.5E-05 53.9 8.0 96 503-634 1-97 (450)
210 2xxj_A L-LDH, L-lactate dehydr 88.4 1.1 3.6E-05 50.0 8.8 72 109-203 1-76 (310)
211 3r6d_A NAD-dependent epimerase 88.4 1.3 4.6E-05 45.7 9.1 98 109-233 6-112 (221)
212 3sxp_A ADP-L-glycero-D-mannohe 88.3 1.7 5.8E-05 48.6 10.6 113 106-235 8-144 (362)
213 1p9l_A Dihydrodipicolinate red 88.3 1.1 3.8E-05 48.1 8.5 101 110-236 2-111 (245)
214 3kkj_A Amine oxidase, flavin-c 88.3 0.29 9.8E-06 50.4 3.9 32 505-542 2-33 (336)
215 3pqe_A L-LDH, L-lactate dehydr 88.3 0.69 2.4E-05 51.8 7.2 76 505-613 5-82 (326)
216 1guz_A Malate dehydrogenase; o 88.3 2.8 9.7E-05 46.3 12.2 72 110-203 2-78 (310)
217 1vkn_A N-acetyl-gamma-glutamyl 88.3 0.79 2.7E-05 51.9 7.7 93 506-636 14-107 (351)
218 1xu9_A Corticosteroid 11-beta- 88.2 0.87 3E-05 49.4 7.9 35 502-542 25-60 (286)
219 3vku_A L-LDH, L-lactate dehydr 88.2 0.78 2.7E-05 51.4 7.6 75 504-613 8-85 (326)
220 1pjc_A Protein (L-alanine dehy 88.2 0.79 2.7E-05 52.0 7.8 35 105-140 164-198 (361)
221 3rft_A Uronate dehydrogenase; 88.2 0.44 1.5E-05 51.2 5.4 33 505-543 3-36 (267)
222 2cvz_A Dehydrogenase, 3-hydrox 88.2 1.2 4.2E-05 48.1 9.1 66 109-206 2-67 (289)
223 4e21_A 6-phosphogluconate dehy 88.1 0.5 1.7E-05 53.7 6.0 35 503-543 20-54 (358)
224 2rcy_A Pyrroline carboxylate r 88.0 0.84 2.9E-05 48.8 7.5 34 108-141 4-40 (262)
225 2d5c_A AROE, shikimate 5-dehyd 88.0 0.98 3.3E-05 48.7 8.0 34 106-141 115-148 (263)
226 1jay_A Coenzyme F420H2:NADP+ o 88.0 1.7 5.9E-05 44.7 9.6 30 110-140 2-32 (212)
227 2bll_A Protein YFBG; decarboxy 88.0 0.89 3.1E-05 50.2 7.9 32 506-543 1-34 (345)
228 2axq_A Saccharopine dehydrogen 88.0 1.2 4.1E-05 52.4 9.4 36 105-140 20-55 (467)
229 2x0j_A Malate dehydrogenase; o 88.0 1.3 4.6E-05 48.8 9.1 32 506-541 1-32 (294)
230 1x7d_A Ornithine cyclodeaminas 88.0 1.1 3.6E-05 50.9 8.5 77 106-204 127-204 (350)
231 2z1m_A GDP-D-mannose dehydrata 87.9 0.61 2.1E-05 51.4 6.5 33 504-542 2-35 (345)
232 3ggo_A Prephenate dehydrogenas 87.9 2.6 9E-05 46.7 11.7 83 108-217 33-117 (314)
233 3gt0_A Pyrroline-5-carboxylate 87.9 0.64 2.2E-05 49.5 6.5 82 506-625 3-84 (247)
234 2bka_A CC3, TAT-interacting pr 87.9 2.5 8.7E-05 44.0 11.1 36 106-141 16-53 (242)
235 3vps_A TUNA, NAD-dependent epi 87.9 0.89 3E-05 49.6 7.8 37 105-142 4-41 (321)
236 1vl6_A Malate oxidoreductase; 87.9 0.4 1.4E-05 54.7 5.0 37 105-141 189-225 (388)
237 3ew7_A LMO0794 protein; Q8Y8U8 87.9 0.81 2.8E-05 47.0 7.0 92 110-231 2-105 (221)
238 2x4g_A Nucleoside-diphosphate- 87.9 0.84 2.9E-05 50.4 7.6 32 506-543 14-46 (342)
239 3i6i_A Putative leucoanthocyan 87.7 1.1 3.6E-05 50.0 8.3 93 106-219 8-110 (346)
240 3svt_A Short-chain type dehydr 87.7 0.96 3.3E-05 49.0 7.8 86 502-612 8-99 (281)
241 3fbt_A Chorismate mutase and s 87.6 0.47 1.6E-05 52.1 5.2 35 106-140 120-154 (282)
242 2pv7_A T-protein [includes: ch 87.6 1.1 3.7E-05 49.3 8.2 32 109-141 22-54 (298)
243 1lnq_A MTHK channels, potassiu 87.6 0.91 3.1E-05 50.7 7.7 83 108-220 115-203 (336)
244 1t2d_A LDH-P, L-lactate dehydr 87.6 0.99 3.4E-05 50.5 7.9 33 506-543 5-37 (322)
245 2vhw_A Alanine dehydrogenase; 87.5 0.9 3.1E-05 51.9 7.7 35 105-140 165-199 (377)
246 1o6z_A MDH, malate dehydrogena 87.5 4 0.00014 45.0 12.7 71 110-203 2-79 (303)
247 3ucx_A Short chain dehydrogena 87.4 1.2 4E-05 47.9 8.2 84 502-612 8-96 (264)
248 2ew2_A 2-dehydropantoate 2-red 87.3 1.9 6.5E-05 47.0 10.0 31 109-140 4-34 (316)
249 2f1k_A Prephenate dehydrogenas 87.3 2.2 7.4E-05 46.0 10.3 30 110-140 2-31 (279)
250 4huj_A Uncharacterized protein 87.3 0.6 2E-05 49.0 5.6 31 506-542 24-55 (220)
251 1bg6_A N-(1-D-carboxylethyl)-L 87.2 1.7 5.9E-05 48.5 9.8 33 108-141 4-36 (359)
252 2dpo_A L-gulonate 3-dehydrogen 87.2 2.1 7.2E-05 47.7 10.3 35 106-141 4-38 (319)
253 4dqv_A Probable peptide synthe 87.2 1.3 4.3E-05 52.2 9.0 125 504-641 72-218 (478)
254 3sju_A Keto reductase; short-c 87.2 0.68 2.3E-05 50.3 6.2 63 502-591 21-84 (279)
255 1np3_A Ketol-acid reductoisome 87.2 1.3 4.3E-05 49.9 8.6 36 104-140 12-47 (338)
256 2eez_A Alanine dehydrogenase; 87.2 0.91 3.1E-05 51.6 7.5 35 105-140 163-197 (369)
257 1oju_A MDH, malate dehydrogena 87.2 1.4 4.7E-05 48.7 8.7 34 506-543 1-34 (294)
258 3gt0_A Pyrroline-5-carboxylate 87.2 0.74 2.5E-05 49.1 6.4 32 109-140 3-37 (247)
259 3nyw_A Putative oxidoreductase 87.1 1.4 4.7E-05 47.0 8.5 62 105-186 4-67 (250)
260 2z1m_A GDP-D-mannose dehydrata 87.1 1.4 4.9E-05 48.4 9.0 34 106-140 1-35 (345)
261 2q1s_A Putative nucleotide sug 87.0 2.2 7.4E-05 48.1 10.6 103 106-235 30-157 (377)
262 2a9f_A Putative malic enzyme ( 87.0 0.48 1.7E-05 54.2 5.0 38 105-142 185-222 (398)
263 2x4g_A Nucleoside-diphosphate- 87.0 1.8 6.3E-05 47.6 9.7 97 109-234 14-131 (342)
264 3nzo_A UDP-N-acetylglucosamine 87.0 1.5 5.3E-05 50.1 9.3 89 498-613 28-121 (399)
265 3ego_A Probable 2-dehydropanto 86.9 0.91 3.1E-05 50.2 7.1 31 108-140 2-32 (307)
266 2h78_A Hibadh, 3-hydroxyisobut 86.9 1.2 4E-05 48.9 8.0 32 109-141 4-35 (302)
267 3u62_A Shikimate dehydrogenase 86.9 0.41 1.4E-05 51.7 4.1 36 106-142 107-142 (253)
268 1pzg_A LDH, lactate dehydrogen 86.9 1.9 6.4E-05 48.4 9.7 73 109-202 10-86 (331)
269 4gx0_A TRKA domain protein; me 86.8 0.87 3E-05 54.7 7.5 87 506-631 349-435 (565)
270 1jay_A Coenzyme F420H2:NADP+ o 86.8 1.5 5.3E-05 45.1 8.4 31 506-542 1-32 (212)
271 3r1i_A Short-chain type dehydr 86.8 0.93 3.2E-05 49.2 7.0 35 502-542 29-64 (276)
272 2d4a_B Malate dehydrogenase; a 86.8 1.6 5.4E-05 48.4 9.0 32 507-543 1-32 (308)
273 2egg_A AROE, shikimate 5-dehyd 86.7 0.34 1.1E-05 53.6 3.4 35 503-542 139-173 (297)
274 3lk7_A UDP-N-acetylmuramoylala 86.7 1.1 3.7E-05 52.5 7.9 93 106-226 7-101 (451)
275 3t4x_A Oxidoreductase, short c 86.6 1.5 5.2E-05 47.1 8.5 63 106-188 8-71 (267)
276 3lyl_A 3-oxoacyl-(acyl-carrier 86.6 0.63 2.2E-05 49.2 5.4 61 503-590 3-64 (247)
277 1zcj_A Peroxisomal bifunctiona 86.5 4.3 0.00015 47.6 13.0 32 109-141 38-69 (463)
278 3gaf_A 7-alpha-hydroxysteroid 86.5 0.61 2.1E-05 49.9 5.3 83 503-612 10-97 (256)
279 3h2s_A Putative NADH-flavin re 86.5 2 6.9E-05 44.1 9.2 92 110-231 2-107 (224)
280 3h7a_A Short chain dehydrogena 86.5 1.1 3.6E-05 48.0 7.2 62 503-591 5-67 (252)
281 1gee_A Glucose 1-dehydrogenase 86.5 1.1 3.6E-05 47.7 7.2 35 502-542 4-39 (261)
282 3doj_A AT3G25530, dehydrogenas 86.5 1 3.4E-05 49.9 7.1 37 105-142 18-54 (310)
283 1ldn_A L-lactate dehydrogenase 86.5 1.3 4.5E-05 49.3 8.1 34 506-543 7-40 (316)
284 3pk0_A Short-chain dehydrogena 86.4 0.88 3E-05 48.8 6.5 85 502-612 7-96 (262)
285 3e48_A Putative nucleoside-dip 86.4 2.7 9.2E-05 45.2 10.5 94 110-231 2-108 (289)
286 3o38_A Short chain dehydrogena 86.4 1.5 5.3E-05 46.7 8.5 34 106-140 20-55 (266)
287 1y6j_A L-lactate dehydrogenase 86.4 1 3.5E-05 50.3 7.2 73 108-203 7-83 (318)
288 3tfo_A Putative 3-oxoacyl-(acy 86.4 1 3.6E-05 48.6 7.1 82 504-612 3-89 (264)
289 2dc1_A L-aspartate dehydrogena 86.2 1.1 3.8E-05 47.4 7.0 77 506-634 1-79 (236)
290 2zyd_A 6-phosphogluconate dehy 86.2 1.4 4.9E-05 51.9 8.7 36 501-542 11-46 (480)
291 3c24_A Putative oxidoreductase 86.2 2 6.8E-05 46.7 9.3 75 109-214 12-87 (286)
292 4fn4_A Short chain dehydrogena 86.2 0.88 3E-05 49.1 6.3 83 502-611 4-91 (254)
293 3sx2_A Putative 3-ketoacyl-(ac 86.1 1.5 5.3E-05 47.2 8.3 96 502-612 10-110 (278)
294 2g5c_A Prephenate dehydrogenas 86.0 4.2 0.00014 43.8 11.8 81 109-216 2-84 (281)
295 2zyd_A 6-phosphogluconate dehy 86.0 1.7 5.7E-05 51.4 9.1 37 103-140 10-46 (480)
296 2i99_A MU-crystallin homolog; 86.0 0.78 2.7E-05 51.0 6.0 72 106-203 133-205 (312)
297 3sc4_A Short chain dehydrogena 86.0 1.5 5.1E-05 47.7 8.2 90 503-612 7-101 (285)
298 3uve_A Carveol dehydrogenase ( 86.0 1.1 3.7E-05 48.6 7.0 36 502-543 8-44 (286)
299 2q1s_A Putative nucleotide sug 85.9 1.3 4.3E-05 50.1 7.8 37 502-543 29-66 (377)
300 1pzg_A LDH, lactate dehydrogen 85.9 1.4 4.8E-05 49.4 8.0 33 506-543 10-42 (331)
301 4da9_A Short-chain dehydrogena 85.8 0.8 2.7E-05 49.8 5.8 85 502-612 26-115 (280)
302 1xg5_A ARPG836; short chain de 85.8 2.4 8.1E-05 45.7 9.6 63 105-187 29-92 (279)
303 4imr_A 3-oxoacyl-(acyl-carrier 85.8 1.2 4E-05 48.4 7.1 39 498-542 26-65 (275)
304 3fbt_A Chorismate mutase and s 85.8 0.48 1.6E-05 52.1 4.0 34 503-541 120-153 (282)
305 4iin_A 3-ketoacyl-acyl carrier 85.8 0.63 2.2E-05 50.1 5.0 35 502-542 26-61 (271)
306 1dih_A Dihydrodipicolinate red 85.7 0.93 3.2E-05 49.5 6.3 98 504-640 4-106 (273)
307 4gx0_A TRKA domain protein; me 85.7 3.4 0.00012 49.5 11.8 85 109-220 349-434 (565)
308 4e6p_A Probable sorbitol dehyd 85.7 1.3 4.3E-05 47.4 7.3 36 502-543 5-41 (259)
309 3tl2_A Malate dehydrogenase; c 85.7 1.5 5E-05 48.9 8.0 35 504-543 7-41 (315)
310 4ibo_A Gluconate dehydrogenase 85.7 0.85 2.9E-05 49.3 6.0 35 502-542 23-58 (271)
311 3nep_X Malate dehydrogenase; h 85.7 2 6.8E-05 47.8 9.0 34 506-543 1-34 (314)
312 3lf2_A Short chain oxidoreduct 85.7 2.4 8.4E-05 45.3 9.6 62 106-187 6-68 (265)
313 1oaa_A Sepiapterin reductase; 85.6 0.99 3.4E-05 48.1 6.4 64 503-591 4-71 (259)
314 2ywl_A Thioredoxin reductase r 85.6 0.5 1.7E-05 47.3 3.8 32 507-544 3-34 (180)
315 2yq5_A D-isomer specific 2-hyd 85.6 1.7 5.8E-05 49.0 8.5 36 502-543 145-180 (343)
316 3enk_A UDP-glucose 4-epimerase 85.6 1 3.4E-05 49.8 6.6 32 505-542 5-37 (341)
317 3ksu_A 3-oxoacyl-acyl carrier 85.6 1 3.4E-05 48.4 6.4 86 503-612 9-99 (262)
318 1rkx_A CDP-glucose-4,6-dehydra 85.6 3.6 0.00012 45.7 11.2 37 104-141 5-42 (357)
319 3afn_B Carbonyl reductase; alp 85.5 1.4 4.9E-05 46.4 7.6 34 503-542 5-39 (258)
320 3tox_A Short chain dehydrogena 85.5 0.8 2.7E-05 49.9 5.6 36 502-543 5-41 (280)
321 3ko8_A NAD-dependent epimerase 85.5 2.1 7.1E-05 46.5 9.1 31 109-140 1-32 (312)
322 2ae2_A Protein (tropinone redu 85.4 1.6 5.5E-05 46.6 7.9 34 503-542 7-41 (260)
323 2rcy_A Pyrroline carboxylate r 85.4 1.2 4E-05 47.7 6.8 37 505-543 4-40 (262)
324 2zat_A Dehydrogenase/reductase 85.4 1.2 4.2E-05 47.4 7.0 35 502-542 11-46 (260)
325 3enk_A UDP-glucose 4-epimerase 85.4 2.4 8.1E-05 46.7 9.6 104 108-234 5-134 (341)
326 4f6c_A AUSA reductase domain p 85.3 1.2 3.9E-05 51.4 7.2 112 505-643 69-202 (427)
327 4egf_A L-xylulose reductase; s 85.3 1.1 3.9E-05 48.0 6.7 85 502-612 17-106 (266)
328 3hn2_A 2-dehydropantoate 2-red 85.3 0.56 1.9E-05 52.0 4.3 33 505-543 2-34 (312)
329 2c5a_A GDP-mannose-3', 5'-epim 85.3 2.3 8E-05 47.9 9.6 32 109-141 30-62 (379)
330 3tsc_A Putative oxidoreductase 85.2 1.2 4E-05 48.2 6.8 97 502-612 8-109 (277)
331 1omo_A Alanine dehydrogenase; 85.2 2.2 7.6E-05 47.6 9.2 73 107-204 124-197 (322)
332 2gdz_A NAD+-dependent 15-hydro 85.1 0.91 3.1E-05 48.6 5.8 34 503-542 5-39 (267)
333 3pef_A 6-phosphogluconate dehy 85.1 1.4 4.8E-05 47.9 7.4 33 109-142 2-34 (287)
334 2c5a_A GDP-mannose-3', 5'-epim 85.1 1.2 4.2E-05 50.3 7.1 33 505-543 29-62 (379)
335 3v2g_A 3-oxoacyl-[acyl-carrier 85.1 1.5 5.2E-05 47.3 7.6 63 503-591 29-92 (271)
336 1i36_A Conserved hypothetical 85.0 2.4 8.2E-05 45.3 9.1 74 110-213 2-75 (264)
337 3st7_A Capsular polysaccharide 85.0 0.96 3.3E-05 50.9 6.2 33 506-543 1-34 (369)
338 1fmc_A 7 alpha-hydroxysteroid 85.0 1.1 3.8E-05 47.3 6.3 33 503-541 9-42 (255)
339 3dtt_A NADP oxidoreductase; st 84.9 0.55 1.9E-05 50.1 3.9 38 500-543 14-51 (245)
340 1ez4_A Lactate dehydrogenase; 84.9 2.2 7.4E-05 47.6 8.9 73 506-613 6-81 (318)
341 2bgk_A Rhizome secoisolaricire 84.9 1.6 5.5E-05 46.7 7.7 34 503-542 14-48 (278)
342 2rhc_B Actinorhodin polyketide 84.8 1.7 5.8E-05 47.0 7.8 34 503-542 20-54 (277)
343 4hb9_A Similarities with proba 84.8 0.53 1.8E-05 53.2 4.0 33 505-543 1-33 (412)
344 1eq2_A ADP-L-glycero-D-mannohe 84.8 2.4 8.1E-05 45.9 9.1 32 110-141 1-33 (310)
345 2hun_A 336AA long hypothetical 84.8 2.3 8E-05 46.7 9.1 35 107-141 2-38 (336)
346 3qlj_A Short chain dehydrogena 84.7 0.94 3.2E-05 50.2 5.8 74 501-591 23-97 (322)
347 2jah_A Clavulanic acid dehydro 84.6 1.8 6.2E-05 45.9 7.8 34 503-542 5-39 (247)
348 3hn2_A 2-dehydropantoate 2-red 84.6 0.4 1.4E-05 53.2 2.7 32 109-141 3-34 (312)
349 3ehe_A UDP-glucose 4-epimerase 84.6 1.6 5.4E-05 47.6 7.6 23 506-528 2-25 (313)
350 3pgx_A Carveol dehydrogenase; 84.6 1.4 4.6E-05 47.8 6.9 97 502-612 12-113 (280)
351 1orr_A CDP-tyvelose-2-epimeras 84.6 3.1 0.00011 45.8 10.0 31 109-140 2-33 (347)
352 4fc7_A Peroxisomal 2,4-dienoyl 84.6 1.4 4.9E-05 47.6 7.1 35 502-542 24-59 (277)
353 3i83_A 2-dehydropantoate 2-red 84.6 0.57 2E-05 52.1 4.0 34 505-544 2-35 (320)
354 1iy8_A Levodione reductase; ox 84.6 3.2 0.00011 44.4 9.8 63 105-187 10-73 (267)
355 1yxm_A Pecra, peroxisomal tran 84.5 1.4 4.9E-05 47.9 7.2 35 502-542 15-50 (303)
356 1vl6_A Malate oxidoreductase; 84.5 0.53 1.8E-05 53.7 3.7 37 502-543 189-225 (388)
357 1x7d_A Ornithine cyclodeaminas 84.5 0.86 2.9E-05 51.6 5.4 76 504-614 128-204 (350)
358 4gwg_A 6-phosphogluconate dehy 84.4 1.3 4.3E-05 52.4 7.0 116 108-231 4-131 (484)
359 3grp_A 3-oxoacyl-(acyl carrier 84.4 0.71 2.4E-05 49.8 4.5 36 501-542 23-59 (266)
360 3hhp_A Malate dehydrogenase; M 84.4 2.5 8.7E-05 46.9 9.1 75 109-203 1-78 (312)
361 3v8b_A Putative dehydrogenase, 84.4 1.5 5.1E-05 47.7 7.2 35 502-542 25-60 (283)
362 3l77_A Short-chain alcohol deh 84.4 1.8 6.1E-05 45.3 7.6 32 505-542 2-34 (235)
363 1vl0_A DTDP-4-dehydrorhamnose 84.4 1.4 4.7E-05 47.6 6.9 42 99-141 2-45 (292)
364 2q1w_A Putative nucleotide sug 84.4 1.6 5.3E-05 48.3 7.5 36 502-543 18-54 (333)
365 1ur5_A Malate dehydrogenase; o 84.4 2.5 8.4E-05 46.9 9.0 33 506-543 3-35 (309)
366 2hq1_A Glucose/ribitol dehydro 84.4 1.8 6.2E-05 45.4 7.7 33 503-541 3-36 (247)
367 4iiu_A 3-oxoacyl-[acyl-carrier 84.3 0.89 3E-05 48.8 5.2 30 500-529 21-51 (267)
368 4dll_A 2-hydroxy-3-oxopropiona 84.2 0.91 3.1E-05 50.5 5.4 38 104-142 27-64 (320)
369 3phh_A Shikimate dehydrogenase 84.2 0.56 1.9E-05 51.1 3.6 31 505-541 118-148 (269)
370 2dc1_A L-aspartate dehydrogena 84.1 3.5 0.00012 43.5 9.7 32 110-141 2-33 (236)
371 3v2h_A D-beta-hydroxybutyrate 84.1 1.7 5.9E-05 47.1 7.5 36 501-542 21-57 (281)
372 3rkr_A Short chain oxidoreduct 84.1 2.2 7.5E-05 45.6 8.2 37 103-140 24-61 (262)
373 3d0o_A L-LDH 1, L-lactate dehy 84.0 2.1 7.3E-05 47.6 8.4 37 503-543 4-40 (317)
374 1rkx_A CDP-glucose-4,6-dehydra 84.0 0.97 3.3E-05 50.4 5.6 37 501-543 5-42 (357)
375 2gn4_A FLAA1 protein, UDP-GLCN 84.0 1.7 5.9E-05 48.6 7.7 80 503-613 19-100 (344)
376 2ydy_A Methionine adenosyltran 84.0 0.93 3.2E-05 49.5 5.3 95 504-642 1-115 (315)
377 4fgs_A Probable dehydrogenase 84.0 0.93 3.2E-05 49.5 5.3 38 500-543 24-62 (273)
378 2dvm_A Malic enzyme, 439AA lon 83.9 0.73 2.5E-05 53.7 4.6 35 105-139 183-219 (439)
379 3l6d_A Putative oxidoreductase 83.9 1 3.5E-05 49.8 5.6 33 108-141 9-41 (306)
380 3ftp_A 3-oxoacyl-[acyl-carrier 83.9 1.1 3.6E-05 48.6 5.7 35 502-542 25-60 (270)
381 1orr_A CDP-tyvelose-2-epimeras 83.9 1.7 5.7E-05 48.0 7.4 31 506-542 2-33 (347)
382 3imf_A Short chain dehydrogena 83.8 1 3.6E-05 48.1 5.5 35 502-542 3-38 (257)
383 3qiv_A Short-chain dehydrogena 83.7 3.6 0.00012 43.4 9.7 35 105-140 6-41 (253)
384 3gvx_A Glycerate dehydrogenase 83.7 0.45 1.6E-05 52.5 2.6 50 91-141 103-154 (290)
385 3kkj_A Amine oxidase, flavin-c 83.7 0.82 2.8E-05 46.8 4.5 32 109-141 3-34 (336)
386 3pdu_A 3-hydroxyisobutyrate de 83.6 1.6 5.4E-05 47.5 7.0 33 109-142 2-34 (287)
387 2i6t_A Ubiquitin-conjugating e 83.6 3.5 0.00012 45.6 9.8 33 109-141 15-48 (303)
388 3g17_A Similar to 2-dehydropan 83.5 0.6 2E-05 51.3 3.5 33 505-543 2-34 (294)
389 2iz1_A 6-phosphogluconate dehy 83.5 3 0.0001 49.0 9.8 32 108-140 5-36 (474)
390 3sc6_A DTDP-4-dehydrorhamnose 83.5 3.2 0.00011 44.5 9.3 104 110-234 7-111 (287)
391 3awd_A GOX2181, putative polyo 83.5 2 6.8E-05 45.5 7.5 34 503-542 11-45 (260)
392 3cky_A 2-hydroxymethyl glutara 83.4 1.9 6.6E-05 47.0 7.6 93 107-229 3-99 (301)
393 4dqv_A Probable peptide synthe 83.4 3.2 0.00011 48.6 10.0 108 106-234 71-219 (478)
394 2iz1_A 6-phosphogluconate dehy 83.4 2.8 9.6E-05 49.3 9.5 32 505-542 5-36 (474)
395 3g0o_A 3-hydroxyisobutyrate de 83.4 2.9 9.8E-05 45.9 9.0 76 107-211 6-81 (303)
396 1o0s_A NAD-ME, NAD-dependent m 83.4 0.47 1.6E-05 56.5 2.7 92 486-582 283-403 (605)
397 2hk9_A Shikimate dehydrogenase 83.4 0.7 2.4E-05 50.3 4.0 36 502-543 126-161 (275)
398 2pnf_A 3-oxoacyl-[acyl-carrier 83.3 1.4 4.8E-05 46.3 6.2 34 503-542 5-39 (248)
399 3rft_A Uronate dehydrogenase; 83.3 1.6 5.3E-05 46.9 6.7 34 108-142 3-37 (267)
400 3u62_A Shikimate dehydrogenase 83.3 0.61 2.1E-05 50.4 3.3 35 503-543 107-141 (253)
401 3osu_A 3-oxoacyl-[acyl-carrier 83.2 1.5 5.2E-05 46.4 6.5 62 504-591 3-65 (246)
402 4f3y_A DHPR, dihydrodipicolina 83.2 2 6.8E-05 46.8 7.5 98 505-640 7-107 (272)
403 1spx_A Short-chain reductase f 83.1 1.5 5.2E-05 47.2 6.5 34 503-542 4-38 (278)
404 1sby_A Alcohol dehydrogenase; 83.1 3.1 0.00011 44.0 8.9 35 106-140 3-38 (254)
405 2x9g_A PTR1, pteridine reducta 83.1 1.8 6.1E-05 47.0 7.2 35 502-542 20-55 (288)
406 1hye_A L-lactate/malate dehydr 83.1 3.2 0.00011 46.0 9.3 76 110-203 2-83 (313)
407 2xxj_A L-LDH, L-lactate dehydr 83.1 2.1 7.1E-05 47.5 7.7 73 506-613 1-76 (310)
408 3hdj_A Probable ornithine cycl 83.1 1.7 5.9E-05 48.3 7.0 73 107-204 120-193 (313)
409 1txg_A Glycerol-3-phosphate de 83.1 4.1 0.00014 44.9 10.2 97 110-232 2-107 (335)
410 3svt_A Short-chain type dehydr 83.1 3.6 0.00012 44.4 9.5 35 105-140 8-43 (281)
411 1xq1_A Putative tropinone redu 83.1 1.7 5.7E-05 46.3 6.8 34 503-542 12-46 (266)
412 3qy9_A DHPR, dihydrodipicolina 83.0 2.4 8.2E-05 45.4 7.9 82 506-640 4-86 (243)
413 2zqz_A L-LDH, L-lactate dehydr 83.0 2.5 8.6E-05 47.2 8.4 34 505-542 9-42 (326)
414 1r6d_A TDP-glucose-4,6-dehydra 83.0 4.5 0.00015 44.4 10.5 102 110-234 2-132 (337)
415 1pj3_A NAD-dependent malic enz 83.0 0.31 1.1E-05 57.8 0.9 45 501-545 280-329 (564)
416 2q1w_A Putative nucleotide sug 83.0 3.4 0.00011 45.6 9.4 35 106-141 19-54 (333)
417 1qyd_A Pinoresinol-lariciresin 82.9 3.7 0.00012 44.6 9.6 97 505-629 4-107 (313)
418 4e12_A Diketoreductase; oxidor 82.9 0.73 2.5E-05 50.3 3.9 32 506-543 5-36 (283)
419 2a9f_A Putative malic enzyme ( 82.9 0.68 2.3E-05 53.0 3.7 38 502-544 185-222 (398)
420 1gpj_A Glutamyl-tRNA reductase 82.9 0.64 2.2E-05 53.7 3.6 35 503-542 165-199 (404)
421 3kb6_A D-lactate dehydrogenase 82.9 0.36 1.2E-05 54.4 1.4 35 502-542 138-172 (334)
422 2hun_A 336AA long hypothetical 82.9 1.4 4.7E-05 48.6 6.2 36 504-543 2-38 (336)
423 3u9l_A 3-oxoacyl-[acyl-carrier 82.8 2.1 7.1E-05 47.7 7.6 89 503-613 3-96 (324)
424 3ngx_A Bifunctional protein fo 82.8 1.2 4E-05 48.6 5.4 33 503-541 148-181 (276)
425 1zem_A Xylitol dehydrogenase; 82.8 2 6.7E-05 45.9 7.2 34 503-542 5-39 (262)
426 1s6y_A 6-phospho-beta-glucosid 82.8 3.8 0.00013 47.9 10.1 93 108-219 7-110 (450)
427 1wma_A Carbonyl reductase [NAD 82.8 1.2 4.2E-05 47.2 5.6 34 504-543 3-38 (276)
428 3i1j_A Oxidoreductase, short c 82.8 3.3 0.00011 43.4 8.9 35 105-140 11-46 (247)
429 3ghy_A Ketopantoate reductase 82.7 0.69 2.4E-05 51.8 3.7 32 505-542 3-34 (335)
430 1guz_A Malate dehydrogenase; o 82.7 2.5 8.6E-05 46.8 8.2 34 506-543 1-34 (310)
431 3edm_A Short chain dehydrogena 82.7 1.2 4E-05 47.7 5.4 34 502-541 5-39 (259)
432 2hrz_A AGR_C_4963P, nucleoside 82.7 1.8 6.2E-05 47.8 7.1 41 503-543 12-54 (342)
433 2qq5_A DHRS1, dehydrogenase/re 82.7 1.1 3.6E-05 48.0 5.0 83 503-612 3-91 (260)
434 1a4i_A Methylenetetrahydrofola 82.7 1.4 4.8E-05 48.6 5.9 34 502-541 162-196 (301)
435 1zk4_A R-specific alcohol dehy 82.6 1.7 5.7E-05 45.8 6.5 34 503-542 4-38 (251)
436 3k6j_A Protein F01G10.3, confi 82.6 7.6 0.00026 45.4 12.5 33 109-142 55-87 (460)
437 1ek6_A UDP-galactose 4-epimera 82.6 2 6.9E-05 47.5 7.4 32 505-542 2-34 (348)
438 2jl1_A Triphenylmethane reduct 82.6 0.82 2.8E-05 49.2 4.1 97 506-638 1-108 (287)
439 2gas_A Isoflavone reductase; N 82.5 4.3 0.00015 43.9 9.9 84 505-614 2-86 (307)
440 4dmm_A 3-oxoacyl-[acyl-carrier 82.4 1.9 6.3E-05 46.5 6.9 34 502-541 25-59 (269)
441 1lld_A L-lactate dehydrogenase 82.4 0.82 2.8E-05 50.6 4.1 36 504-543 6-41 (319)
442 2c07_A 3-oxoacyl-(acyl-carrier 82.4 1.7 5.7E-05 47.1 6.5 33 503-541 42-75 (285)
443 1sny_A Sniffer CG10964-PA; alp 82.4 1.6 5.3E-05 46.6 6.2 37 501-543 17-57 (267)
444 2nwq_A Probable short-chain de 82.3 2.3 8E-05 45.9 7.7 35 501-542 18-53 (272)
445 3b1f_A Putative prephenate deh 82.3 4.6 0.00016 43.7 10.0 80 108-214 6-86 (290)
446 3e48_A Putative nucleoside-dip 82.3 3.1 0.00011 44.7 8.6 96 506-637 1-106 (289)
447 4dyv_A Short-chain dehydrogena 82.3 1.8 6.2E-05 46.8 6.7 37 501-543 24-61 (272)
448 1npy_A Hypothetical shikimate 82.2 0.98 3.4E-05 49.2 4.6 33 504-541 118-150 (271)
449 3hwr_A 2-dehydropantoate 2-red 82.2 2.7 9.1E-05 46.6 8.2 105 107-232 18-123 (318)
450 1f0y_A HCDH, L-3-hydroxyacyl-C 82.2 0.81 2.8E-05 50.3 4.0 32 506-543 16-47 (302)
451 3c1o_A Eugenol synthase; pheny 82.2 3.5 0.00012 45.0 9.2 82 505-614 4-87 (321)
452 1np3_A Ketol-acid reductoisome 82.2 1 3.6E-05 50.5 4.9 92 501-635 12-106 (338)
453 4a26_A Putative C-1-tetrahydro 82.2 1.4 4.7E-05 48.7 5.6 35 502-542 162-197 (300)
454 3gg2_A Sugar dehydrogenase, UD 82.1 4.5 0.00016 47.2 10.5 99 109-229 3-123 (450)
455 2uvd_A 3-oxoacyl-(acyl-carrier 82.1 1.8 6.3E-05 45.7 6.6 33 503-541 2-35 (246)
456 1ek6_A UDP-galactose 4-epimera 82.1 4.3 0.00015 44.8 9.9 32 108-140 2-34 (348)
457 3eag_A UDP-N-acetylmuramate:L- 82.1 3.3 0.00011 46.1 8.9 87 109-226 5-95 (326)
458 3ioy_A Short-chain dehydrogena 82.1 3.1 0.00011 46.1 8.7 63 105-187 5-68 (319)
459 3cxt_A Dehydrogenase with diff 82.0 1.6 5.4E-05 47.7 6.2 34 503-542 32-66 (291)
460 3ftp_A 3-oxoacyl-[acyl-carrier 82.0 2.2 7.4E-05 46.1 7.2 50 90-140 8-60 (270)
461 3mog_A Probable 3-hydroxybutyr 82.0 6.2 0.00021 46.5 11.6 104 106-232 3-123 (483)
462 3qha_A Putative oxidoreductase 82.0 1 3.4E-05 49.5 4.6 34 108-142 15-48 (296)
463 1z82_A Glycerol-3-phosphate de 81.9 1.9 6.4E-05 48.1 6.9 89 110-228 16-111 (335)
464 3ego_A Probable 2-dehydropanto 81.9 0.82 2.8E-05 50.6 3.9 32 505-543 2-33 (307)
465 1ks9_A KPA reductase;, 2-dehyd 81.8 0.85 2.9E-05 49.3 3.9 33 506-544 1-33 (291)
466 1ja9_A 4HNR, 1,3,6,8-tetrahydr 81.8 1.6 5.4E-05 46.6 6.0 34 503-542 19-53 (274)
467 1nyt_A Shikimate 5-dehydrogena 81.8 0.78 2.7E-05 49.8 3.5 33 503-541 117-149 (271)
468 3d4o_A Dipicolinate synthase s 81.8 0.77 2.6E-05 50.5 3.5 35 503-543 153-187 (293)
469 1g0o_A Trihydroxynaphthalene r 81.6 1.2 4.1E-05 48.2 5.0 34 503-542 27-61 (283)
470 1b0a_A Protein (fold bifunctio 81.5 1.3 4.3E-05 48.6 5.0 34 502-541 156-190 (288)
471 1edo_A Beta-keto acyl carrier 81.5 2.7 9.3E-05 43.9 7.6 29 506-540 2-31 (244)
472 3k96_A Glycerol-3-phosphate de 81.4 4.1 0.00014 46.1 9.5 99 107-232 28-136 (356)
473 2gas_A Isoflavone reductase; N 81.4 7.6 0.00026 41.9 11.4 91 109-219 3-103 (307)
474 2ewd_A Lactate dehydrogenase,; 81.4 0.84 2.9E-05 50.7 3.7 34 505-543 4-37 (317)
475 1bg6_A N-(1-D-carboxylethyl)-L 81.4 0.9 3.1E-05 50.8 4.0 33 505-543 4-36 (359)
476 1oc2_A DTDP-glucose 4,6-dehydr 81.4 2.5 8.5E-05 46.7 7.6 31 506-542 5-38 (348)
477 4b1b_A TRXR, thioredoxin reduc 81.4 0.83 2.8E-05 54.8 3.9 32 507-544 225-256 (542)
478 3e03_A Short chain dehydrogena 81.3 1.8 6.1E-05 46.7 6.3 90 503-612 4-98 (274)
479 2rir_A Dipicolinate synthase, 81.3 0.8 2.7E-05 50.5 3.5 35 503-543 155-189 (300)
480 1gy8_A UDP-galactose 4-epimera 81.3 6.6 0.00022 44.2 11.3 31 109-140 3-35 (397)
481 1omo_A Alanine dehydrogenase; 81.3 2.5 8.4E-05 47.2 7.5 73 504-614 124-197 (322)
482 1gq2_A Malic enzyme; oxidoredu 81.2 0.44 1.5E-05 56.3 1.3 45 501-545 278-327 (555)
483 2qyt_A 2-dehydropantoate 2-red 81.2 2.9 9.9E-05 45.7 8.0 32 109-140 9-45 (317)
484 1y81_A Conserved hypothetical 81.2 2.5 8.4E-05 41.1 6.5 40 102-142 8-51 (138)
485 2ew2_A 2-dehydropantoate 2-red 81.1 0.94 3.2E-05 49.5 4.0 32 506-543 4-35 (316)
486 3ond_A Adenosylhomocysteinase; 81.1 0.82 2.8E-05 53.8 3.6 35 503-543 263-297 (488)
487 1u8x_X Maltose-6'-phosphate gl 81.0 5.7 0.00019 46.7 10.7 92 107-219 27-129 (472)
488 4e3z_A Putative oxidoreductase 81.0 2.4 8.4E-05 45.4 7.2 31 504-540 25-56 (272)
489 1n2s_A DTDP-4-, DTDP-glucose o 81.0 1 3.6E-05 48.6 4.2 107 110-234 2-109 (299)
490 2wm3_A NMRA-like family domain 81.0 4.1 0.00014 44.0 9.0 100 108-233 5-119 (299)
491 1dxy_A D-2-hydroxyisocaproate 81.0 0.98 3.4E-05 50.7 4.1 36 502-543 142-177 (333)
492 3hg7_A D-isomer specific 2-hyd 80.9 0.68 2.3E-05 51.8 2.8 51 91-142 121-173 (324)
493 2j6i_A Formate dehydrogenase; 80.9 1.6 5.6E-05 49.6 5.9 36 105-140 161-196 (364)
494 3pp8_A Glyoxylate/hydroxypyruv 80.8 0.59 2E-05 52.2 2.2 51 90-141 119-171 (315)
495 3ehe_A UDP-glucose 4-epimerase 80.8 2.6 8.7E-05 46.0 7.4 29 109-139 2-31 (313)
496 2aef_A Calcium-gated potassium 80.8 0.9 3.1E-05 47.8 3.5 89 504-629 8-96 (234)
497 3oh8_A Nucleoside-diphosphate 80.8 4.5 0.00015 47.9 10.0 33 108-141 147-180 (516)
498 3gvx_A Glycerate dehydrogenase 80.8 0.86 2.9E-05 50.2 3.4 36 502-543 119-154 (290)
499 3ijp_A DHPR, dihydrodipicolina 80.6 2.9 9.8E-05 46.0 7.5 99 506-640 22-122 (288)
500 1xdw_A NAD+-dependent (R)-2-hy 80.6 1 3.5E-05 50.5 4.1 36 502-543 143-178 (331)
No 1
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.6e-216 Score=2018.23 Aligned_cols=998 Identities=45% Similarity=0.806 Sum_probs=939.3
Q ss_pred CchhhhhhhhhhhccCHHHHHHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchH
Q 001356 84 SDIDEDLHSRQLAVYGRETMRRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNR 163 (1093)
Q Consensus 84 ~~~~~~~YsRQi~l~G~~~q~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~K 163 (1093)
.+++++|||||+++||.++|+||++++|||+|+||+|+++||||+++|||+|||+|+|.|+.+||+||||++++|||++|
T Consensus 3 ~~id~~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dvG~~K 82 (1015)
T 3cmm_A 3 GEIDESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQKR 82 (1015)
T ss_dssp CCCCHHHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGTTSBH
T ss_pred hhhhhHhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhcChHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCcEEEEeecccchhhhcCCceEEEecC-CHHHHHHHHHHHHhcCCCcceEeeeecceeEEEEeecCC
Q 001356 164 ALASIQKLQELNNAVAISALTTELTKEKLSDFQAVVFTDI-SLEKAVEFDDYCHNHQPPIAFIKSEVRGLFGNIFCDFGP 242 (1093)
Q Consensus 164 a~a~~~~L~eLNp~V~V~~~~~~l~~~~l~~~dvVV~~~~-~~~~~~~ln~~c~~~~~~ip~I~~~~~G~~G~vf~d~g~ 242 (1093)
|++++++|+++||+|+|+++...++++++++||+||+|.+ +.+.+..|+++|++++ +|||++++.|++|++|+|+|+
T Consensus 83 a~a~~~~L~~lNP~v~v~~~~~~l~~~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~--iplI~~~~~G~~G~v~~d~~~ 160 (1015)
T 3cmm_A 83 GDVTRAKLAELNAYVPVNVLDSLDDVTQLSQFQVVVATDTVSLEDKVKINEFCHSSG--IRFISSETRGLFGNTFVDLGD 160 (1015)
T ss_dssp HHHHHHHHTTSCTTSCEEECCCCCCSTTGGGCSEEEECTTSCHHHHHHHHHHHHHHT--CEEEEEEEETTEEEEEEECCS
T ss_pred HHHHHHHHHHHCCCCeEEEecCCCCHHHHhcCCEEEEcCCCCHHHHHHHHHHHHHcC--CCEEEEEecccEEEEEecCCC
Confidence 9999999999999999999999998899999999999999 9999999999999999 999999999999999999999
Q ss_pred ceEEecCCCCCCccceeccccCCCCCceeecccccccccCCCeEEEeEeecccccCCCCCeeeeccCCcccccccCcccc
Q 001356 243 EFTVFDVDGEEPHTGIIASISNDNPPLISCVDDERIEFQDGDLVVFSEVHGMTELNDGKPRKVKNARPYSFSIDEDTTNY 322 (1093)
Q Consensus 243 ~f~v~d~~ge~p~~~~i~~I~~~~p~lv~~~~~~~h~~~dgd~v~f~ev~gm~~ln~~~~~~i~~~~~~~~~i~~dt~~f 322 (1093)
+|.|++++|+.|.+..+.+| +.|++++|+++.+|++++||++.|++++||+++|+++++++++.+||+|.| +|++.|
T Consensus 161 ~~~c~~~~~~~p~~~~i~~i--~~p~~v~~l~~~~h~~~~gd~v~F~ev~gm~elN~~e~~~i~~~~p~~f~I-~Dts~~ 237 (1015)
T 3cmm_A 161 EFTVLDPTGEEPRTGMVSDI--EPDGTVTMLDDNRHGLEDGNFVRFSEVEGLDKLNDGTLFKVEVLGPFAFRI-GSVKEY 237 (1015)
T ss_dssp CEEESBSSCCCCCEEEEEEE--CTTCEEEESTTCCCCCCTTCEEEEECCBTSGGGGSSCCEECEEEETTEEEC-SCCTTT
T ss_pred ceEEeeCCCCCCccccccCC--CCCceeEeeecccccCCCCCeEEEEeeccchhhcCccceeeEEcCCceeEe-cccchh
Confidence 99999999999999999999 567899999999999999999999999999999999999999999999999 689999
Q ss_pred cccccCCeEEEeecCeeecccchHHhhcCCCCccccccccCCCcchHHHHHHHHHHHHHHh-CCCCCCCCHHHHHHHHHH
Q 001356 323 SAYEKGGIVTQVKQPKIINFKPLREALKDPGDFLLSDFSKFDRPPVLHLAFQALDKFIQEL-GRFPVAGSEEDAQKIISL 401 (1093)
Q Consensus 323 ~~y~~gg~~~qvk~p~~~~f~sL~e~l~~p~~~~~~d~~k~~r~~~l~~~~~al~~F~~~~-gr~P~~~~~~D~~~~~~i 401 (1093)
..|.+||+++|+|+|++++|++|++++++| .++.+|+.|++++..+|++||||++|.++| ||+|++++++|+++|.++
T Consensus 238 ~~yv~~g~~~qvk~p~~i~f~~l~~~l~~p-~~l~~d~~k~~~~~~l~~~~~Al~~F~~~~~gr~P~~~~~~D~~~l~~~ 316 (1015)
T 3cmm_A 238 GEYKKGGIFTEVKVPRKISFKSLKQQLSNP-EFVFSDFAKFDRAAQLHLGFQALHQFAVRHNGELPRTMNDEDANELIKL 316 (1015)
T ss_dssp CCCCBCCEEEECCCCEEECCCCHHHHHHSC-CBCCSCGGGTHHHHHHHHHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHH
T ss_pred hhhhcCceeEEecCCcccCHHHHHHHHcCh-HHHHHHHhccCcchHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999 577889999999999999999999999999 999999999999999999
Q ss_pred HHHHHhhcCCc--cccccCHHHHHHHHhhccCccCchhhhhccchhHHHHHhhccCcccccceeeccCCCCCCC---CCC
Q 001356 402 FTNINDNLADE--RVEEIDHKLLCHFAFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLLQFFYFDSVESLPS---EPL 476 (1093)
Q Consensus 402 a~~i~~~~~~~--~~~~i~~~li~~~~~~~~~el~PvaA~iGGiaAQEVIKaiTgkf~PI~q~~~fD~~e~lp~---~~~ 476 (1093)
+++++.+.+.. ...+++++++++|+++++++|||||||+||++||||||+|||||+||+||||||+++++|. .++
T Consensus 317 a~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~el~pvaA~iGGivAQEVIKaiT~kf~Pi~~~~~~d~~~~~~~~~~~~~ 396 (1015)
T 3cmm_A 317 VTDLSVQQPEVLGEGVDVNEDLIKELSYQARGDIPGVVAFFGGLVAQEVLKACSGKFTPLKQFMYFDSLESLPDPKNFPR 396 (1015)
T ss_dssp HHHHHHHCHHHHCTTCCCCHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHCBSCCCCSEEEEECGGGSCCTTTSCC
T ss_pred HHHHHHhcCCCccccccCcHHHHHHHHHhcCcccCcHHHHhcchHHHHHHHHhccCCCcccceEEecchhhccccccCCC
Confidence 99998764321 0036899999999999999999999999999999999999999999999999999999994 567
Q ss_pred CCCCCCCccCcchhhhhccCHHHHHHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCccccc
Q 001356 477 DPRDLQPLNSRYDAQISVFGSKLQKKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLF 556 (1093)
Q Consensus 477 ~~~~~~~~~~Rydrqi~l~G~~~q~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf 556 (1093)
+++++.|.++||+||+++||.++|++|++++|+|||||||||++|++||++||+||++|+|+|+|+|+|+.|||||||||
T Consensus 397 ~~~~~~~~~~Ry~rq~~l~G~~~q~kL~~~~VlvVGaGGlGsevlk~La~~Gv~~g~~G~i~lvD~D~Ve~SNLnRQ~lf 476 (1015)
T 3cmm_A 397 NEKTTQPVNSRYDNQIAVFGLDFQKKIANSKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLF 476 (1015)
T ss_dssp STTTTSCCSSTTHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTTTCSTTCEEEEECCCBCCGGGTTTCTTC
T ss_pred ChhhccchhhhhhhHHHhcCHHHHHHHhcCeEEEEecCHHHHHHHHHHHHcCcCcCCCCeEEEEeCCEeccccccccccC
Confidence 88888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccchHHHHHHHHHHhCCCC--EEEEEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceEe
Q 001356 557 RDWNIGQAKSTVAASAAALINPHL--NTEALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLE 634 (1093)
Q Consensus 557 ~~~dvG~~Ka~va~~~l~~~np~~--~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~ 634 (1093)
+.+|||++||++|+++++++||++ +|+++..++.++++.+++++||+++|+||+|+||+++|++++++|+.+++|+|+
T Consensus 477 ~~~dvG~~Ka~~aa~~l~~iNP~v~~~v~~~~~~i~~~~~~~~~~~~~~~~D~Vi~a~Dn~~aR~~ln~~c~~~~~Pli~ 556 (1015)
T 3cmm_A 477 RPKDVGKNKSEVAAEAVCAMNPDLKGKINAKIDKVGPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLE 556 (1015)
T ss_dssp CGGGTTSBHHHHHHHHHHHHCGGGTTTEEEECCCCSGGGTTTSCHHHHHHCSEEEECCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred ChhhCCCHHHHHHHHHHHHHCCCCcceEEEEecccCchhhhhccHhhhccCCEEEECCCCHHHHHHHHHHHHHcCCcEEE
Confidence 999999999999999999999999 999999999988887888899999999999999999999999999999999999
Q ss_pred ccccCcccceEEEeCCcccccCcCCCCCCCCCCcccccCCCCChhhHHHHHHHHhhhhhccChhhHhhhcCCcHHHHHHh
Q 001356 635 SGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLTSPTEYASAM 714 (1093)
Q Consensus 635 sgt~G~~G~v~v~ip~~t~~y~~~~~p~~~~~p~Ct~~~~P~~~~hci~wA~~~f~~~f~~~~~~~~~~l~~~~~~~~~~ 714 (1093)
+|+.|++|++++++|+.|+||.|..+|+++.+|.||+++||+.++|||+|||++|+++|+..++++|+|++|| +|++.+
T Consensus 557 ~g~~G~~G~v~v~~p~~t~cy~c~~dp~~~~~P~Ctl~~~P~~~~h~i~wa~~~f~~lf~~~~~~~~~~l~~~-~~~~~~ 635 (1015)
T 3cmm_A 557 SGTLGTKGNTQVIIPRLTESYSSSRDPPEKSIPLCTLRSFPNKIDHTIAWAKSLFQGYFTDSAENVNMYLTQP-NFVEQT 635 (1015)
T ss_dssp EEEETTEEEEEEECTTTBCCGGGSCCCCCCCCCHHHHHTCCCSHHHHHHHHHHHHHHHHTHHHHHHHHHHHCT-THHHHH
T ss_pred eCCCccccceEEEeCCCCCccCCCCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHHHHhhhhhhhhhhccCc-hhHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 687777
Q ss_pred hhcCchhHHHhHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCCCCCCcccCCCCCCCcccccC
Q 001356 715 KNAGDAQARDNLDRVLECLDKERCETFQDCITWARLRFEDYFADRVKQLTFTFPENATTSNGTPFWSAPKRFPRPLQFSV 794 (1093)
Q Consensus 715 ~~~~~~~~~~~l~~~~~~l~~~~~~~~~~c~~~a~~~f~~~F~~~i~~Ll~~~p~d~~~~~g~~fws~~kr~P~pl~fd~ 794 (1093)
.+....+. +.|+.+++.| ..+|.+|++|++||+.+|+++|+++|+|||++||+|++|++|+|||+|+||+|+||+||+
T Consensus 636 ~~~~~~~~-~~l~~~~~~l-~~~~~~~~~c~~~a~~~f~~~F~~~I~~Ll~~~p~d~~~~~g~~fW~~~kr~P~pl~fd~ 713 (1015)
T 3cmm_A 636 LKQSGDVK-GVLESISDSL-SSKPHNFEDCIKWARLEFEKKFNHDIKQLLFNFPKDAKTSNGEPFWSGAKRAPTPLEFDI 713 (1015)
T ss_dssp HC---CCH-HHHHHHHHHH-HSCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHSCTTCBCSTTCBSSCTTCCCCCCCCCCT
T ss_pred HhccchhH-HHHHHHHHHh-hcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccCcccccCCCCCCCCcccCC
Confidence 66544333 6788999888 788999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHcCCCCC--CCCCChhHHHHhhhhccCCCCCCCCCccccccccccccCCCCcChHHHHHHHH
Q 001356 795 DDLSHLQFLMAASILRAETYGIPIP--DWVKSPVKLADAVNKVIVPDFQPKENVKIETDEKATSMSTGSIDDAVVINELL 872 (1093)
Q Consensus 795 ~~~~h~~fi~~~a~l~a~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~ 872 (1093)
+|++|++||+++|+|+|.+|||+.+ .|..+.+.+.++++++.+|+|.|+++++|.+++++...++.+.++.+.+++|.
T Consensus 714 ~~~~h~~fi~~~a~l~a~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~l~ 793 (1015)
T 3cmm_A 714 YNNDHFHFVVAGASLRAYNYGIKSDDSNSKPNVDEYKSVIDHMIIPEFTPNANLKIQVNDDDPDPNANAANGSDEIDQLV 793 (1015)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCCCSSTTSSCCHHHHHHHHTTCCCCCCCCCSSCCCCSSTTSSCC---------CCHHHH
T ss_pred CCHHHHHHHHHHHHhHHHhcCCCCccccccCCHHHHHHHHhhCcCCCcCCccCceeccchhhhcccccccccHHHHHHHH
Confidence 9999999999999999999999985 47788999999999999999999999999988765443322332445667777
Q ss_pred HHHHHhhhcCCCCCCCCCceeeccCCCCchhHHHHHHhhhhhhhcCCCCccHHHHHHHhccccchhhhhhhHHHHHHHHH
Q 001356 873 QKLEKCQKQLPTGYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLE 952 (1093)
Q Consensus 873 ~~l~~~~~~~~~~~~~~~~~FeKDDd~n~hidFv~aasNLRA~ny~I~~~~~~~~K~iAG~IIPAIATTtA~VaGl~~lE 952 (1093)
++|++... ..++++.|++||||||+|+|||||+|||||||+||+||++|||++|+||||||||||||||+||||+|+|
T Consensus 794 ~~l~~~~~--~~~~~~~~~~FeKDDd~n~h~dFi~aasNlRa~ny~I~~~~~~~~k~iaG~IIPAIaTT~AivaGl~~lE 871 (1015)
T 3cmm_A 794 SSLPDPST--LAGFKLEPVDFEKDDDTNHHIEFITACSNCRAQNYFIETADRQKTKFIAGRIIPAIATTTSLVTGLVNLE 871 (1015)
T ss_dssp TTSCCGGG--GTTCCCCCCCCCTTCTTSSHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHTTCCCCCHHHHHHHHHHHHHH
T ss_pred HHhccchh--cccCCCCceeeecCCCchhHHHHHHHHHHHHHHHcCCCccCHHHHHHHhCCcCccchhHHHHHHHHHHHH
Confidence 76655443 3567899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcccccccccccccccccccCCCCCCccccCCcce-eEEeEEEeCCCCcHHHHHHHHHHc-CCceeeeecC
Q 001356 953 LYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVFKHQDMSW-TVWDRWILRDNPTLRQLLQWLQDK-GLNAYSISYG 1030 (1093)
Q Consensus 953 l~K~l~~~~~~~~~rn~f~nla~p~~~~~eP~~~~~~~~~~~~~-t~wd~~~v~~~~TL~~li~~~~~~-~l~~~~i~~g 1030 (1093)
+||+++|.++++.|||+|+|||+|+|.|+||.+|++.++...+| |+||||++.+++||++|+++|+++ |++++||++|
T Consensus 872 ~~K~~~~~~~~~~~kn~f~nla~~~~~~~~p~~~~~~~~~~~~~~t~wd~~~v~~~~Tl~~li~~~~~~~~~~~~~i~~~ 951 (1015)
T 3cmm_A 872 LYKLIDNKTDIEQYKNGFVNLALPFFGFSEPIASPKGEYNNKKYDKIWDRFDIKGDIKLSDLIEHFEKDEGLEITMLSYG 951 (1015)
T ss_dssp HHHHHTTCCCGGGCCEEEEETTTTEEEEECCCBCCEEEETTEEEETTTCEEEEESCCBHHHHHHHHHHTTCCEEEEEEET
T ss_pred HHHHHhcccchhhhhhHHHhccCCceeecCCCCCCCCCCCCCCCCeEEEEEEECCCCcHHHHHHHHHHHhCCcceeeccC
Confidence 99999988889999999999999999999999999999888999 999999999899999999999999 9999999999
Q ss_pred CceeeccCCc--chhhcccCcHHHHHHhhhcCCCCCCeeEEEEEEEeecCCCCccccCeEEEEe
Q 001356 1031 SCLLFNSMFP--RHKERMDKKVVDLVRDVAKAELPPYRQHFDVVVACVDEDDNDIDIPQISIYF 1092 (1093)
Q Consensus 1031 ~~~LY~~~~~--~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~l~v~~~d~~~~~~~~P~v~~~~ 1092 (1093)
++|||++++| ++++||+++|+||++.++|+++|++++||+|+|+|+|++++||++|+|+|+|
T Consensus 952 ~~~ly~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~d~~~p~v~~~~ 1015 (1015)
T 3cmm_A 952 VSLLYASFFPPKKLKERLNLPITQLVKLVTKKDIPAHVSTMILEICADDKEGEDVEVPFITIHL 1015 (1015)
T ss_dssp TEEEEETTCCHHHHHHHTTSBHHHHHHHHSSSCCCSSCCEEEEEEEEECTTSCEECCCEEEEEC
T ss_pred CcEEEecCCCchhhHHhccCCHHHHHHhhccCcCCCCceEEEEEEEecCCCCCcCCCCcEEEeC
Confidence 9999999987 7789999999999999999999999999999999999989999999999986
No 2
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=100.00 E-value=1.4e-101 Score=930.55 Aligned_cols=516 Identities=25% Similarity=0.387 Sum_probs=418.2
Q ss_pred hhhccCHHHHHHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHH
Q 001356 491 QISVFGSKLQKKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAA 570 (1093)
Q Consensus 491 qi~l~G~~~q~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~ 570 (1093)
|+++||.++|++|++++|+||||||+||++|++||++|| |+|+|+|+|+|+.|||||||||+.+|||++||++|+
T Consensus 3 qi~l~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGV-----G~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa 77 (640)
T 1y8q_B 3 LSRGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGF-----SHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAK 77 (640)
T ss_dssp ---CCCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHH
T ss_pred hhhhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCC-----CeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHH
Confidence 899999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCEEEEEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceEeccccCcccceEEEeCC
Q 001356 571 SAAALINPHLNTEALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLESGTLGAKCNTQMVIPH 650 (1093)
Q Consensus 571 ~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~sgt~G~~G~v~v~ip~ 650 (1093)
++++++||+++|+++..++.++ .++.+|++++|+||+|+||+.+|.+++++|+.+++|+|++|+.|+.|++++++|+
T Consensus 78 ~~L~~iNP~v~V~a~~~~i~~~---~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~~G~v~vi~p~ 154 (640)
T 1y8q_B 78 ESVLQFYPKANIVAYHDSIMNP---DYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKKG 154 (640)
T ss_dssp HHHHTTCTTCEEEEEESCTTST---TSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEEEEETTEEEEEEECTT
T ss_pred HHHHHHCCCCeEEEEecccchh---hhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEEecccceEEEECCC
Confidence 9999999999999999988643 2456899999999999999999999999999999999999999999999999999
Q ss_pred cccccCcCCCCCCCCCCcccccCCCCChhhHHHHHHHHhhhhhccCh--hhHhhhcCCcHH-HHHHhhhcCchhHHHhHH
Q 001356 651 LTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTP--AEVNAYLTSPTE-YASAMKNAGDAQARDNLD 727 (1093)
Q Consensus 651 ~t~~y~~~~~p~~~~~p~Ct~~~~P~~~~hci~wA~~~f~~~f~~~~--~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~ 727 (1093)
.|+||.|..+|+++.+|.||++++|+.++|||+||+++|+++|+..+ ++++.++++|.. +... ......+..+.++
T Consensus 155 ~t~Cy~C~~~p~~~~~p~Cti~~~p~~~~hci~~a~~~f~~lf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 233 (640)
T 1y8q_B 155 VTECYECHPKPTQRTFPGATIRNTPSEPIHCIVWAKYLFNQLFGEEDADQEVSPDRADPEAAWEPT-EAEARARASNEDG 233 (640)
T ss_dssp TSCCTTSSCCCCCCCCCTTTTTSCCCSHHHHHHHHHHHHHHHHSCCCGGGCCSCCTTCTTSCCC----------------
T ss_pred CCCCcccCCCCCCcccceeeecCCCCchHHHHHHHHHHHHHHhCCcchhhhhcccccchhhhhhhh-hhhhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999876 334445666532 1111 1111112223344
Q ss_pred HHHHHhhhhcccchHHHHHHHHH-HHHHHHHHHHHHhhhcCCCCccCCCCCCcccCCCCCCCcccccCCcchhHHHHHH-
Q 001356 728 RVLECLDKERCETFQDCITWARL-RFEDYFADRVKQLTFTFPENATTSNGTPFWSAPKRFPRPLQFSVDDLSHLQFLMA- 805 (1093)
Q Consensus 728 ~~~~~l~~~~~~~~~~c~~~a~~-~f~~~F~~~i~~Ll~~~p~d~~~~~g~~fws~~kr~P~pl~fd~~~~~h~~fi~~- 805 (1093)
.+... .+.+|.+|+.||+. +|+++|+++|+|||++ ++||++ ||+|+||.||..++.|..+...
T Consensus 234 ~~~~~----~~~~~~~~~~~a~~~~f~k~F~~~I~~Ll~~----------~~fW~~-kr~P~pl~fd~~~~~~~~~~~~~ 298 (640)
T 1y8q_B 234 DIKRI----STKEWAKSTGYDPVKLFTKLFKDDIRYLLTM----------DKLWRK-RKPPVPLDWAEVQSQGEETNASD 298 (640)
T ss_dssp ----------CHHHHHHTTSCHHHHHHHHHTHHHHHHTTC----------GGGCSS-SCCCCCCCHHHHHHC--------
T ss_pred HHHHH----hhhhHHHhHhHHHHHHHHHHHhhHHHHHHhC----------cccccC-CCCCCCcccCccccccccccccc
Confidence 44332 24589999999985 9999999999999973 899999 9999999999988888643100
Q ss_pred HHHHHHHHcCCCCCCCCCChhHHHHhhhhccCCCCCCCCCccccccccccccCCCCcChHHHHHHHHHHHHHhhhcCCCC
Q 001356 806 ASILRAETYGIPIPDWVKSPVKLADAVNKVIVPDFQPKENVKIETDEKATSMSTGSIDDAVVINELLQKLEKCQKQLPTG 885 (1093)
Q Consensus 806 ~a~l~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 885 (1093)
.+++. .+|++ +.+.++.........+.++.|.++|+..
T Consensus 299 ~~~~~--~~~~~---------------------------------d~~~~~~~~~~~~~~~~~~~l~~~l~~~------- 336 (640)
T 1y8q_B 299 QQNEP--QLGLK---------------------------------DQQVLDVKSYARLFSKSIETLRVHLAEK------- 336 (640)
T ss_dssp --------CCCG---------------------------------GGSCCCHHHHHHHHHHHHHHHHHHHHHT-------
T ss_pred ccccc--ccCCC---------------------------------hhhhcChhhhhhhHHHHHHHHHHHhhhc-------
Confidence 00000 11111 0000100000000123455566665442
Q ss_pred CCCCCceeeccCCCCchhHHHHHHhhhhhhhcCCCCccHHHHHHHhccccchhhhhhhHHHHHHHHHHHHHhcCCCCccc
Q 001356 886 YKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLED 965 (1093)
Q Consensus 886 ~~~~~~~FeKDDd~n~hidFv~aasNLRA~ny~I~~~~~~~~K~iAG~IIPAIATTtA~VaGl~~lEl~K~l~~~~~~~~ 965 (1093)
.++.|++||||||+ |||||+|||||||+||+||++|||++|+||||||||||||||+||||+|+|+||++++ +++.
T Consensus 337 ~~~~~~~FdKDDd~--h~dFV~aaaNlRA~~y~I~~~~~~~~K~iAG~IIPAIATTnAiVaGl~~lE~~Kvl~~--~~~~ 412 (640)
T 1y8q_B 337 GDGAELIWDKDDPS--AMDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNAVIAGLIVLEGLKILSG--KIDQ 412 (640)
T ss_dssp CTTCCCCCCTTCHH--HHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHTT--CGGG
T ss_pred ccCCCcccCCCCHH--HHHHHHHHHHHHHHHcCCCcCCHHHHHHHhCCcccchhhHHHHHHHHHHHHHHHHHhc--cHHh
Confidence 14789999999997 9999999999999999999999999999999999999999999999999999999997 5789
Q ss_pred ccccccccccc----cccccCCCCCCcccc-CCcceeEEeEEEeCCCCcHHHHHHHH-HHc-CCceeeeec---CCceee
Q 001356 966 YRNTFANLALP----LFSMAEPVPPKVFKH-QDMSWTVWDRWILRDNPTLRQLLQWL-QDK-GLNAYSISY---GSCLLF 1035 (1093)
Q Consensus 966 ~rn~f~nla~p----~~~~~eP~~~~~~~~-~~~~~t~wd~~~v~~~~TL~~li~~~-~~~-~l~~~~i~~---g~~~LY 1035 (1093)
|||+|+|+++| +|.+++|.+|++.++ +...|++|++|++. ++||++|+++| +++ |++++||++ |.++||
T Consensus 413 ~kn~f~n~a~~~~~~~~~~~~p~~p~~~c~vc~~~~~~~~~~~~~-~~TL~~li~~~~~~~~~l~~~~is~~~~~~~~ly 491 (640)
T 1y8q_B 413 CRTIFLNKQPNPRKKLLVPCALDPPNPNCYVCASKPEVTVRLNVH-KVTVLTLQDKIVKEKFAMVAPDVQIEDGKGTILI 491 (640)
T ss_dssp CEEEEECSSCCTTSEEEEEEECCCCCTTCTTTSSSCEEEEEECTT-TCBHHHHHHCCCCCCTCCSSCEEEESSSSCCEEE
T ss_pred hhhhheeeccCCCCcEEeecccCCCCCCCcccCCccEEEEEEeCC-CCcHHHHHHHHHHHhhCCCCceEEEEcCCCcEEE
Confidence 99999999999 999999998877653 33467899999776 89999999996 777 999999999 999999
Q ss_pred ccCCcchhhcccCcHHHH-HHhhhcCCCCCCeeEEEEEEEeec
Q 001356 1036 NSMFPRHKERMDKKVVDL-VRDVAKAELPPYRQHFDVVVACVD 1077 (1093)
Q Consensus 1036 ~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~~~~~~l~v~~~d 1077 (1093)
+.+++++++||+++|+|| ++..++..+++...++.|++.|.-
T Consensus 492 ~~~~~~~~~~l~~~l~el~v~~~~~~~v~d~~~~~~~~i~~~~ 534 (640)
T 1y8q_B 492 SSEEGETEANNHKKLSEFGIRNGSRLQADDFLQDYTLLINILH 534 (640)
T ss_dssp CSSSSSSTTGGGSBGGGGTCCTTCEEEEEETTTTEEEEEEEEE
T ss_pred eccchhhHHhhhCcHHHhCccCCcEEEecCCCccEEEEEEEEe
Confidence 999888899999999995 777777777777777888888764
No 3
>1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus}
Probab=100.00 E-value=2e-69 Score=592.87 Aligned_cols=268 Identities=41% Similarity=0.747 Sum_probs=238.4
Q ss_pred CCCCCCCcccccCCCCChhhHHHHHHHHhhhhhccChhhHhhhcCCcHHHHHHhhhcCchhHHHhHHHHHHHhhhhcccc
Q 001356 661 PPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLTSPTEYASAMKNAGDAQARDNLDRVLECLDKERCET 740 (1093)
Q Consensus 661 p~~~~~p~Ct~~~~P~~~~hci~wA~~~f~~~f~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 740 (1093)
.-++++|+||+|+||+.|+|||+|||++|+++|+..++++|+|++|| .|++.+.+.++.+..+.|+.+++.|...+|.+
T Consensus 9 ~~~ks~P~CTlrsfP~~i~HcI~WAr~lFe~lF~~~~~~~n~~l~dp-~~~~~~~~~~~~~~~~~l~~i~~~L~~~~p~~ 87 (276)
T 1z7l_A 9 EFEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPAENVNQYLTDS-KFVERTLRLAGTQPLEVLEAVQRSLVLQRPQT 87 (276)
T ss_dssp -----CCHHHHHTCCCSHHHHHHHHHHHHHHHHTHHHHHHHHHTTCS-HHHHHHHTSSTTHHHHHHHHHHHHHTTTCCSS
T ss_pred cCCCCCceeccCCCCCChhHHHHHHHHHHHHHHcCCHHHHHHhhcCh-HHHHHHHhccchhhHHHHHHHHHHHhhcCCCc
Confidence 44688999999999999999999999999999999999999999999 78888888777777789999999998899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCCCCCCcccCCCCCCCcccccCCcchhHHHHHHHHHHHHHHcCCCCCC
Q 001356 741 FQDCITWARLRFEDYFADRVKQLTFTFPENATTSNGTPFWSAPKRFPRPLQFSVDDLSHLQFLMAASILRAETYGIPIPD 820 (1093)
Q Consensus 741 ~~~c~~~a~~~f~~~F~~~i~~Ll~~~p~d~~~~~g~~fws~~kr~P~pl~fd~~~~~h~~fi~~~a~l~a~~~~i~~~~ 820 (1093)
|++|++|||.+|+++|+++|+|||++||+|++|++|++|||||||||+||+||..|++|++||+++|+|+|++|||++.
T Consensus 88 ~~~c~~~Ar~~F~k~F~~~I~qLL~~fP~D~~t~~G~~fWsg~Kr~P~PL~fd~~~~~h~~fI~aaa~L~A~~~gi~~~- 166 (276)
T 1z7l_A 88 WGDCVTWACHHWHTQYCNNIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVNNTLHLDYVMAAANLFAQTYGLTGS- 166 (276)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHSCTTCBCTTSCBSSCSSCCCCCCCCCCTTSHHHHHHHHHHHHHHHHHTTCCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCcccCCCCCCCCCcccCCCchHHHHHHHHHHHHHHHHcCCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred CCCChhHHHHhhhhccCCCCCCCCCccccccccccccCCCCcChHHHHHHHHHHHHHhhhcCCCCCCCCCceeeccCCCC
Q 001356 821 WVKSPVKLADAVNKVIVPDFQPKENVKIETDEKATSMSTGSIDDAVVINELLQKLEKCQKQLPTGYKMNPIQFEKDDDTN 900 (1093)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~FeKDDd~n 900 (1093)
.+.+.+.++++++.+|+|.|+++++|.++|++....+.+++ .+.+++|..+|++... ..+.++.|++||||||+|
T Consensus 167 --~d~~~i~~~~~~~~vp~f~p~~~~ki~~~e~~~~~~~~~~~-~~~~~~L~~~l~~~~~--~~~~~~~pl~FeKDDd~N 241 (276)
T 1z7l_A 167 --QDRAAVASLLQSVQVPEFTPKSGVKIHVSDQELQSANASVD-DSRLEELKATLPSPDK--LPGFKMYPIDFEKDDDSN 241 (276)
T ss_dssp --CCHHHHHHHHHTCCCCCCCCCSSCCCCSSSCCC------CC-SHHHHHHHHHSCCGGG--STTCCCCCCCCCSSCTTS
T ss_pred --CCHHHHHHHHhcCCCCCcCCccccccccchhhhchhccccc-HHHHHHHHHHhhhhhh--cccccCCCcceecCCCcc
Confidence 57789999999999999999999999998876544333333 4578888888876544 356789999999999999
Q ss_pred chhHHHHHHhhhhhhhcCCCCccHHHHHHHhcccc
Q 001356 901 FHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRII 935 (1093)
Q Consensus 901 ~hidFv~aasNLRA~ny~I~~~~~~~~K~iAG~II 935 (1093)
+|||||+|||||||+||+||++|||++|+||||||
T Consensus 242 ~hmdFItAaSNLRA~nY~I~~~dr~~~K~IAG~II 276 (276)
T 1z7l_A 242 FHMDFIVAASNLRAENYDISPADRHKSKLIAGKII 276 (276)
T ss_dssp SHHHHHHHHHHHHHHHTTCCCCCHHHHHHHTTC--
T ss_pred cHHHHHHHHHHHHHHHcCCCcCCHHHHHHHhCCcC
Confidence 99999999999999999999999999999999998
No 4
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=100.00 E-value=5.5e-64 Score=600.51 Aligned_cols=379 Identities=24% Similarity=0.329 Sum_probs=309.2
Q ss_pred chh-hhhhhhhhhccCHHHHHHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchH
Q 001356 85 DID-EDLHSRQLAVYGRETMRRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNR 163 (1093)
Q Consensus 85 ~~~-~~~YsRQi~l~G~~~q~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~K 163 (1093)
+++ .+||+||+++||.++|++|++++|+|+|+||+|+|+||||+++|||+|+|+|+|.|+.+||+||||++++|||++|
T Consensus 8 ~id~~~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~K 87 (531)
T 1tt5_A 8 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNR 87 (531)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBH
T ss_pred cccHHHHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcCcHH
Confidence 455 4899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCcEEEEeecccc------hhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEeeeecceeEEEE
Q 001356 164 ALASIQKLQELNNAVAISALTTELT------KEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKSEVRGLFGNIF 237 (1093)
Q Consensus 164 a~a~~~~L~eLNp~V~V~~~~~~l~------~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~~~~G~~G~vf 237 (1093)
|++++++|+++||+|+|+++...++ ++++++||+||+|.++.+.+..|+++|++++ +|||++++.|++|++|
T Consensus 88 a~~a~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~--iplI~~~~~G~~G~v~ 165 (531)
T 1tt5_A 88 AEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQ--IPLLICRTYGLVGYMR 165 (531)
T ss_dssp HHHHHHHHHTTCTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTT--CCEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcC--CCEEEEEecCCeEEEE
Confidence 9999999999999999999987664 3689999999999999999999999999999 9999999999999999
Q ss_pred eecCCceEEecCCCCCCccceeccccCCCCC-----------------------ce---eecccccccccCC-------C
Q 001356 238 CDFGPEFTVFDVDGEEPHTGIIASISNDNPP-----------------------LI---SCVDDERIEFQDG-------D 284 (1093)
Q Consensus 238 ~d~g~~f~v~d~~ge~p~~~~i~~I~~~~p~-----------------------lv---~~~~~~~h~~~dg-------d 284 (1093)
++++ .|++++.+|+.+.+. .++..++|. ++ ++++..+. .-+| |
T Consensus 166 ~~~p-~~~~~d~~~~~~~~~--lr~~~p~P~~~~~~~~~~~~~~~~~~~~~~p~vv~~~~ale~~k~-~~~g~~P~~~~~ 241 (531)
T 1tt5_A 166 IIIK-EHPVIESHPDNALED--LRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYS-ETNGRIPKTYKE 241 (531)
T ss_dssp EECS-CEEESCCCCSSCCCC--CCSSSCCHHHHHHHHTCC-------CGGGSCHHHHHHHHHHHHTT-TTCCCCCCHHHH
T ss_pred EEcC-CceeccCCCCCCCCc--ccccCCCCCchhhhhccCcccccCCCcCCchHHHHHHHHHHHHHH-hcCCCCCCchhh
Confidence 9998 799999988754331 333333333 22 33333211 1145 7
Q ss_pred eEEEeEe--ecc----cccCCC--------------------------CCeeeec----------------------cCC
Q 001356 285 LVVFSEV--HGM----TELNDG--------------------------KPRKVKN----------------------ARP 310 (1093)
Q Consensus 285 ~v~f~ev--~gm----~~ln~~--------------------------~~~~i~~----------------------~~~ 310 (1093)
.+.|+++ .|| .+.|.. ++.+++. .-|
T Consensus 242 ~~~f~~~i~~~~~~~~~e~N~~Ea~~~~~~~~~~~~i~~~v~~~~~~~~~~~~~~~s~~Fwil~~alk~F~~~~~~g~lP 321 (531)
T 1tt5_A 242 KEDFRDLIRQGILKPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLP 321 (531)
T ss_dssp HHHHHHHHHHTTSSCTTHHHHHHHHHHHHHHSCCCCCCHHHHHHHTSHHHHSCCSSCCHHHHHHHHHHHHHHTTTTTSCC
T ss_pred HHHHHHHHHhhcccCccccchHHHHHHHHhhcCCccCcHHHHHHhcccccccccCCCchHHHHHHHHHHHHHhcCCCCCC
Confidence 7888888 777 233321 1111111 137
Q ss_pred cccccccCcccccccccC--------------------CeEEEeec-Ceeeccc------------------chHHhhcC
Q 001356 311 YSFSIDEDTTNYSAYEKG--------------------GIVTQVKQ-PKIINFK------------------PLREALKD 351 (1093)
Q Consensus 311 ~~~~i~~dt~~f~~y~~g--------------------g~~~qvk~-p~~~~f~------------------sL~e~l~~ 351 (1093)
++++|+..++.+..|.+. |++++++. |..++|+ +|++.+..
T Consensus 322 l~g~ipDm~s~t~~Y~~lq~iy~~ka~~D~~~v~~~v~~~~~~~~~~~~~i~~~~i~~f~kn~~~l~~i~~~~l~~~~~~ 401 (531)
T 1tt5_A 322 VRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGL 401 (531)
T ss_dssp CCCCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSSSCHHHHHHHHHTGGGCEEECCCCHHHHHST
T ss_pred CCCccCccccchhcccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCCHHHHHHHHhchhhhhcccccchHhhhcc
Confidence 788885335555555443 45556656 5555555 55555544
Q ss_pred CC---CccccccccCCCcchHHHHHHHHHHHHHHhCCCCCCCC---HHHHHHHHHHHHHHHhhcCCccccccCHHHHHHH
Q 001356 352 PG---DFLLSDFSKFDRPPVLHLAFQALDKFIQELGRFPVAGS---EEDAQKIISLFTNINDNLADERVEEIDHKLLCHF 425 (1093)
Q Consensus 352 p~---~~~~~d~~k~~r~~~l~~~~~al~~F~~~~gr~P~~~~---~~D~~~~~~ia~~i~~~~~~~~~~~i~~~li~~~ 425 (1093)
|. ..+..++.+.+++..+|++||||++|.++|||+|++++ ++|+++|.+++++++...+. .+.+++++++++
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~f~~~~gr~P~~~~~~~~~D~~~l~~~~~~~~~~~~~--~~~~~~~~~~e~ 479 (531)
T 1tt5_A 402 DTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGL--SVMVKDDYVHEF 479 (531)
T ss_dssp TTSCHHHHHHHTTSTTSTHHHHHHHHHHHHHHHHHSSCTTCSTTTHHHHHHHHHHHHHHHHHHHTC--CCCCCHHHHHHH
T ss_pred ccchhhhhhhhhhccccchHHHHHHHHHHHHHHHhCCCCCccccchHHHHHHHHHHHHHHHHhcCC--cccccHHHHHHH
Confidence 41 12567788889999999999999999999999999987 89999999999999887653 246889999999
Q ss_pred HhhccCccCchhhhhccchhHHHHHhhccCcccccceeeccCCCCC
Q 001356 426 AFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLLQFFYFDSVESL 471 (1093)
Q Consensus 426 ~~~~~~el~PvaA~iGGiaAQEVIKaiTgkf~PI~q~~~fD~~e~l 471 (1093)
+|+++++|||||||+||+|||||||+|||||+||+|||||||+++.
T Consensus 480 ~r~~~~el~pvaA~~GGi~AQEviK~iT~q~~Pi~n~~~fDg~~~~ 525 (531)
T 1tt5_A 480 CRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQT 525 (531)
T ss_dssp HHTTTCCCHHHHHHHHHHHHHHHHHHHHTCSBCCCSCEEEETTTTE
T ss_pred HHhcCCCcCHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCCce
Confidence 9999999999999999999999999999999999999999999874
No 5
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=1e-59 Score=538.26 Aligned_cols=322 Identities=31% Similarity=0.449 Sum_probs=271.5
Q ss_pred CCchhhhhhhhhhhccCHHHHHHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccch
Q 001356 83 PSDIDEDLHSRQLAVYGRETMRRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKN 162 (1093)
Q Consensus 83 ~~~~~~~~YsRQi~l~G~~~q~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~ 162 (1093)
.++.+.+|||||+++||.++|++|++++|+|+|+||+|+++||||+++|||+|+|+|+|.|+.+||+||||++++|||++
T Consensus 11 l~~~~~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~ 90 (346)
T 1y8q_A 11 ISEEEAAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRN 90 (346)
T ss_dssp CCHHHHHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSB
T ss_pred CCHHHHHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCC
Confidence 57788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCcEEEEeecccc---hhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEeeeecceeEEEEee
Q 001356 163 RALASIQKLQELNNAVAISALTTELT---KEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKSEVRGLFGNIFCD 239 (1093)
Q Consensus 163 Ka~a~~~~L~eLNp~V~V~~~~~~l~---~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~~~~G~~G~vf~d 239 (1093)
||++++++|+++||+|+|+++...++ ++++++||+||+|.++.+.+..||++|++++ +|||++++.|++|++|+|
T Consensus 91 Ka~~~~~~l~~lnp~v~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~--ip~i~~~~~G~~G~v~~d 168 (346)
T 1y8q_A 91 RAEASLERAQNLNPMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQICHKNS--IKFFTGDVFGYHGYTFAN 168 (346)
T ss_dssp HHHHHHHHHHHTCTTSEEEEECSCGGGCCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTT--CEEEEEEEEBTEEEEEEE
T ss_pred HHHHHHHHHHhHCCCeEEEEEecccCcchHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcC--CCEEEEeecccEEEEEEe
Confidence 99999999999999999999988773 5789999999999999999999999999999 999999999999999999
Q ss_pred cCCceEEecCCCCCCccceeccccCCCCCceeecccccccccCCCeEEEeEeeccccc-CCCCCeeeeccCCcccccccC
Q 001356 240 FGPEFTVFDVDGEEPHTGIIASISNDNPPLISCVDDERIEFQDGDLVVFSEVHGMTEL-NDGKPRKVKNARPYSFSIDED 318 (1093)
Q Consensus 240 ~g~~f~v~d~~ge~p~~~~i~~I~~~~p~lv~~~~~~~h~~~dgd~v~f~ev~gm~~l-n~~~~~~i~~~~~~~~~i~~d 318 (1093)
+|+++++.+..|+...++ |.+. +++++.++ |
T Consensus 169 ~~~~~~~~~~~~~~~~p~------------------------------------~~~~~~~~~~~~~------------d 200 (346)
T 1y8q_A 169 LGEHEFVEEKTKVAKVSQ------------------------------------GVEDGPDTKRAKL------------D 200 (346)
T ss_dssp CSEEEEEEECC---------------------------------------------------------------------
T ss_pred cCCCCEEEcCCCCcCCCc------------------------------------ccccCCCCCcccc------------c
Confidence 998777777655311111 1111 11112211 1
Q ss_pred cccccccccCCeEEEeecCeeecccchHHhhcCCCCcccccc-ccCCCcchHHHHHHHHHHHHHHhCCCCCC-CCHHHHH
Q 001356 319 TTNYSAYEKGGIVTQVKQPKIINFKPLREALKDPGDFLLSDF-SKFDRPPVLHLAFQALDKFIQELGRFPVA-GSEEDAQ 396 (1093)
Q Consensus 319 t~~f~~y~~gg~~~qvk~p~~~~f~sL~e~l~~p~~~~~~d~-~k~~r~~~l~~~~~al~~F~~~~gr~P~~-~~~~D~~ 396 (1093)
++ ++++.|++++|.+|++++..|.. ..++ .+.+|++.+|++++||++|+++|||+|.+ ++++|++
T Consensus 201 ~~-----------~~~~~~~~~~f~~l~~~~~~~~~--~~~~~~~~~r~~~~~~~~~al~~f~~~~~~~P~~~~~~~d~~ 267 (346)
T 1y8q_A 201 SS-----------ETTMVKKKVVFCPVKEALEVDWS--SEKAKAALKRTTSDYFLLQVLLKFRTDKGRDPSSDTYEEDSE 267 (346)
T ss_dssp -------------CCCEEEEEEECCCHHHHTSCCSC--SHHHHHHHTTSCTHHHHHHHHHHHHHHSSSCCCGGGHHHHHH
T ss_pred CC-----------ceEEEeceeeccCHHHHhcCCch--hhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 11 34677899999999999998732 1111 34688999999999999999999999974 6789999
Q ss_pred HHHHHHHHHHhhcCCccccccCHHHHHHHHhhccCccCchhhhhccchhHHHHHhhccCcccccceeeccCCCCCC
Q 001356 397 KIISLFTNINDNLADERVEEIDHKLLCHFAFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLLQFFYFDSVESLP 472 (1093)
Q Consensus 397 ~~~~ia~~i~~~~~~~~~~~i~~~li~~~~~~~~~el~PvaA~iGGiaAQEVIKaiTgkf~PI~q~~~fD~~e~lp 472 (1093)
+|.+++++++++.+.. ...+++++++++ .++|+|||||+||++||||||+|||||+||+|||||||++++.
T Consensus 268 ~l~~~a~~~~~~~~~~-~~~~~~~~~~~~----~~~l~pv~AiiGGi~aQEviK~it~k~~Pl~n~~~fD~~~~~~ 338 (346)
T 1y8q_A 268 LLLQIRNDVLDSLGIS-PDLLPEDFVRYC----FSEMAPVCAVVGGILAQEIVKALSQRDPPHNNFFFFDGMKGNG 338 (346)
T ss_dssp HHHHHHHHHHHTTTCC-GGGSCGGGGGSS----CSBCHHHHHHHHHHHHHHHHHHHHTBSCCCCSEEEEETTTTEE
T ss_pred HHHHHHHHHHHhcCCC-cccCCHHHHHHh----cCCccHHHHHHHHHHHHHHHHHhcCCCcccccEEEEEccccce
Confidence 9999999998876532 234677776654 7899999999999999999999999999999999999999864
No 6
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=100.00 E-value=1.5e-56 Score=523.68 Aligned_cols=360 Identities=28% Similarity=0.462 Sum_probs=283.5
Q ss_pred CcchhhhhccCHH-------------HH-HHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCC
Q 001356 486 SRYDAQISVFGSK-------------LQ-KKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLS 551 (1093)
Q Consensus 486 ~Rydrqi~l~G~~-------------~q-~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLn 551 (1093)
.||+++-++++.. .+ ..|++++|+||||||+||+++++||++|| |+|+|+|+|+|+.|||+
T Consensus 7 ~r~~~vntl~~~~g~~~g~gf~~g~e~~~~~L~~~~VlvvG~GGlGs~va~~La~aGv-----g~i~ivD~D~Ve~sNL~ 81 (434)
T 1tt5_B 7 GRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGF-----RQIHVIDMDTIDVSNLN 81 (434)
T ss_dssp TTTHHHHHHHHSCCSSCCTTCCCCSSHHHHHHHTCCEEEECSSTHHHHHHHHHHHTTC-----CCEEEEECCBCCGGGTT
T ss_pred hhhccceEEEcCCCcccccccccCHHHHHHHhcCCEEEEECcCHHHHHHHHHHHHcCC-----CEEEEEcCCEechhccC
Confidence 4666666665433 34 45699999999999999999999999999 99999999999999999
Q ss_pred cccccccCccccchHHHHHHHHHHhCCCCEEEEEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhccccc---
Q 001356 552 RQFLFRDWNIGQAKSTVAASAAALINPHLNTEALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYF--- 628 (1093)
Q Consensus 552 RQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~--- 628 (1093)
|||||+++|||++||++|+++++++||+++|+++..++.+. +.++++++|+||+|+||+++|+++|+.|+.+
T Consensus 82 RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~~~-----~~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~ 156 (434)
T 1tt5_B 82 RQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDF-----NDTFYRQFHIIVCGLDSIIARRWINGMLISLLNY 156 (434)
T ss_dssp TCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEESCGGGB-----CHHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCB
T ss_pred CCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEecccchh-----hHHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999888653 2578999999999999999999999999874
Q ss_pred ---------ccceEeccccCcccceEEEeCCcccccCcCCC--CCCCCCCcccccCCCCChhhHHHHHHHHhhhhhccCh
Q 001356 629 ---------QKPLLESGTLGAKCNTQMVIPHLTENYGASRD--PPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTP 697 (1093)
Q Consensus 629 ---------~~pli~sgt~G~~G~v~v~ip~~t~~y~~~~~--p~~~~~p~Ct~~~~P~~~~hci~wA~~~f~~~f~~~~ 697 (1093)
++|+|++|+.|+.|++++++|+.++||.|..+ |+++.+|.|+++++|..++|||+||+.+
T Consensus 157 ~~g~~~~~~~iPli~~~~~g~~G~v~v~~p~~t~Cy~C~~~~~p~~~~~p~Ct~~~~p~~~~h~i~~a~~i--------- 227 (434)
T 1tt5_B 157 EDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRML--------- 227 (434)
T ss_dssp SSSCBCGGGCCCEEEEEEETTEEEEEEECTTTSCCGGGGGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHT---------
T ss_pred cccccccccCCcEEEeccccceeEEEEECCCCCCCcccccCCCCCcCCCcccccccCCcchhHHHHHHHHH---------
Confidence 99999999999999999999999999999643 6778899999999999999999999751
Q ss_pred hhHhhhcCCcHHHHHHhhhcCchhHHHhHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCCCCC
Q 001356 698 AEVNAYLTSPTEYASAMKNAGDAQARDNLDRVLECLDKERCETFQDCITWARLRFEDYFADRVKQLTFTFPENATTSNGT 777 (1093)
Q Consensus 698 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~c~~~a~~~f~~~F~~~i~~Ll~~~p~d~~~~~g~ 777 (1093)
.| ++
T Consensus 228 ------------------------------------------------~~-----~~----------------------- 231 (434)
T 1tt5_B 228 ------------------------------------------------QW-----PK----------------------- 231 (434)
T ss_dssp ------------------------------------------------HH-----HH-----------------------
T ss_pred ------------------------------------------------HH-----hh-----------------------
Confidence 01 00
Q ss_pred CcccCCCCCCCcccccCCcchhHHHHHHHHHHHHHHcCCCCCCCCCChhHHHHhhhhccCCCCCCCCCcccccccccccc
Q 001356 778 PFWSAPKRFPRPLQFSVDDLSHLQFLMAASILRAETYGIPIPDWVKSPVKLADAVNKVIVPDFQPKENVKIETDEKATSM 857 (1093)
Q Consensus 778 ~fws~~kr~P~pl~fd~~~~~h~~fi~~~a~l~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 857 (1093)
++ |.
T Consensus 232 ------~~-~~--------------------------------------------------------------------- 235 (434)
T 1tt5_B 232 ------EQ-PF--------------------------------------------------------------------- 235 (434)
T ss_dssp ------SC-TT---------------------------------------------------------------------
T ss_pred ------hc-cc---------------------------------------------------------------------
Confidence 00 00
Q ss_pred CCCCcChHHHHHHHHHHHHHhhhcCCCCCCCCCceeeccCCCCchhHHHHHHhhhhhhhcCCCCccHHHHHHHhccccch
Q 001356 858 STGSIDDAVVINELLQKLEKCQKQLPTGYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPA 937 (1093)
Q Consensus 858 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~FeKDDd~n~hidFv~aasNLRA~ny~I~~~~~~~~K~iAG~IIPA 937 (1093)
..|+.||+||+. |++||++++|+||..|+|+..+++.+++++|+||||
T Consensus 236 ------------------------------~~~~~~d~d~~~--~~~~v~~~a~~~~~~~gi~~~~~~~~~gv~~~iipa 283 (434)
T 1tt5_B 236 ------------------------------GEGVPLDGDDPE--HIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPA 283 (434)
T ss_dssp ------------------------------CTTCCCCTTCHH--HHHHHHHHHHHHHHHTTCCCCCHHHHHHHHTTCCCC
T ss_pred ------------------------------ccccccCCCcHH--HHHHHHHHHHHHHHHcCCCccCHHHHHhHhhccCcc
Confidence 002345666554 999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhcCCC-Ccccccccccccccccc-ccc-CCCCCCccccCCcceeEEeEEEeCCCCcHHHHH
Q 001356 938 IATSTAMATGLVCLELYKVLDGGH-KLEDYRNTFANLALPLF-SMA-EPVPPKVFKHQDMSWTVWDRWILRDNPTLRQLL 1014 (1093)
Q Consensus 938 IATTtA~VaGl~~lEl~K~l~~~~-~~~~~rn~f~nla~p~~-~~~-eP~~~~~~~~~~~~~t~wd~~~v~~~~TL~~li 1014 (1093)
||||||+|+|++++|++|+|.|.. ++..|. .|--+...++ .+. ++.|.+. .++ +.|+++.+.+++||++|+
T Consensus 284 ia~t~aiig~l~a~EaiK~l~g~~~~l~~~l-~~d~~~~~~~~~~~~~~~~~C~--vC~---~~~~~~~~~~~~tl~~~~ 357 (434)
T 1tt5_B 284 VASTNAVIAAVCATEVFKIATSAYIPLNNYL-VFNDVDGLYTYTFEAERKENCP--ACS---QLPQNIQFSPSAKLQEVL 357 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCSCCCCSEE-EEECSBSCEEEEECCCCCTTCT--TTC---SSCBCCCC-----CTTHH
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCcccCceE-EEEcCCCceeEEEeccCCCCCC--ccC---CCCceEEECCCccHHHHH
Confidence 999999999999999999999853 343321 1111111111 111 2222222 222 357788888889999999
Q ss_pred HHHHHc---CCceeeeec----CCceeeccCCc----chhhcccCcHHHHH
Q 001356 1015 QWLQDK---GLNAYSISY----GSCLLFNSMFP----RHKERMDKKVVDLV 1054 (1093)
Q Consensus 1015 ~~~~~~---~l~~~~i~~----g~~~LY~~~~~----~~~~~l~~~l~~l~ 1054 (1093)
+++.++ +++.+||++ |+++||++++| ++++||+|+|+||.
T Consensus 358 ~~l~~~~~~~~~~~~is~~~~~~~~~ly~~~~~~~~~~~~~~l~~~l~~l~ 408 (434)
T 1tt5_B 358 DYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELG 408 (434)
T ss_dssp HHHHHCSSCCCSSCCCEET----TEECCCCCCTTTTTTSCC-CCC-----C
T ss_pred HHHhccCccceEccEEEEEccCCCcEEEecCCcchhhhhHhhhcCCHHHcC
Confidence 999886 689999988 68999998865 56789999999993
No 7
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=100.00 E-value=5.5e-53 Score=534.29 Aligned_cols=358 Identities=27% Similarity=0.454 Sum_probs=296.1
Q ss_pred chhhhhccCHHHHHHH-hcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchH
Q 001356 488 YDAQISVFGSKLQKKL-EEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKS 566 (1093)
Q Consensus 488 ydrqi~l~G~~~q~~L-~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka 566 (1093)
|...--.+|.+.|+++ +++||+||||||+||+++++|+++|| |+|+|+|+|+|+.|||+|||||+.+|||++||
T Consensus 393 ~~~~~~~~g~~~~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gv-----g~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka 467 (805)
T 2nvu_B 393 FTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGF-----RQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKA 467 (805)
T ss_dssp TSCTTCCCCSHHHHHHHHTCCEEEECCSSHHHHHHHHHHTTTC-----CEEEEEECCBCCGGGGGTCTTCCGGGTTSBHH
T ss_pred CCCcccCCCHHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CcEEEECCCeecccccccccccchhhcCChHH
Confidence 3333345799999988 99999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCEEEEEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhccccc------------ccceEe
Q 001356 567 TVAASAAALINPHLNTEALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYF------------QKPLLE 634 (1093)
Q Consensus 567 ~va~~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~------------~~pli~ 634 (1093)
++++++|+++||+++|+++..++.+. +.+|++++|+||+|+||+.+|++||+.|+.+ ++|+|+
T Consensus 468 ~~~~~~l~~~np~~~v~~~~~~~~~~-----~~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~~p~i~ 542 (805)
T 2nvu_B 468 EVAAEFLNDRVPNCNVVPHFNKIQDF-----NDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLID 542 (805)
T ss_dssp HHHHHHHHHHSTTCEEEEEESCGGGS-----CHHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGCCCEEE
T ss_pred HHHHHHHHHHCCCCEEEEEecccccc-----HHHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccCCcEEE
Confidence 99999999999999999999988753 2578899999999999999999999999874 999999
Q ss_pred ccccCcccceEEEeCCcccccCcCC--CCCCCCCCcccccCCCCChhhHHHHHHHHhhhhhccChhhHhhhcCCcHHHHH
Q 001356 635 SGTLGAKCNTQMVIPHLTENYGASR--DPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLTSPTEYAS 712 (1093)
Q Consensus 635 sgt~G~~G~v~v~ip~~t~~y~~~~--~p~~~~~p~Ct~~~~P~~~~hci~wA~~~f~~~f~~~~~~~~~~l~~~~~~~~ 712 (1093)
+|+.|+.|++++++|+.|+||.|.. .|+....|.|+++++|..++|||+||+..
T Consensus 543 ~~~~g~~G~~~~~~p~~~~c~~c~~~~~p~~~~~~~c~~~~~~~~~~~~i~~a~~~------------------------ 598 (805)
T 2nvu_B 543 GGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRML------------------------ 598 (805)
T ss_dssp EEEETTEEEEEEECTTTSCCTTTSGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHT------------------------
T ss_pred eccccCceeEEEECCCCCCceeccCCCCCCCCCCCccccCCCCCCccHHHHHHHHh------------------------
Confidence 9999999999999999999999964 47777899999999999999999998741
Q ss_pred HhhhcCchhHHHhHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCccCCCCCCcccCCCCCCCcccc
Q 001356 713 AMKNAGDAQARDNLDRVLECLDKERCETFQDCITWARLRFEDYFADRVKQLTFTFPENATTSNGTPFWSAPKRFPRPLQF 792 (1093)
Q Consensus 713 ~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~c~~~a~~~f~~~F~~~i~~Ll~~~p~d~~~~~g~~fws~~kr~P~pl~f 792 (1093)
.|... +..+
T Consensus 599 ---------------------------------~~~~~---------------------------------~~~~----- 607 (805)
T 2nvu_B 599 ---------------------------------QWPKE---------------------------------QPFG----- 607 (805)
T ss_dssp ---------------------------------HHHHH---------------------------------CTTS-----
T ss_pred ---------------------------------hcccc---------------------------------cCCC-----
Confidence 01000 0000
Q ss_pred cCCcchhHHHHHHHHHHHHHHcCCCCCCCCCChhHHHHhhhhccCCCCCCCCCccccccccccccCCCCcChHHHHHHHH
Q 001356 793 SVDDLSHLQFLMAASILRAETYGIPIPDWVKSPVKLADAVNKVIVPDFQPKENVKIETDEKATSMSTGSIDDAVVINELL 872 (1093)
Q Consensus 793 d~~~~~h~~fi~~~a~l~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~ 872 (1093)
T Consensus 608 -------------------------------------------------------------------------------- 607 (805)
T 2nvu_B 608 -------------------------------------------------------------------------------- 607 (805)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhhcCCCCCCCCCceeeccCCCCchhHHHHHHhhhhhhhcCCCCccHHHHHHHhccccchhhhhhhHHHHHHHHH
Q 001356 873 QKLEKCQKQLPTGYKMNPIQFEKDDDTNFHMDLIAGLANMRARNYGIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLE 952 (1093)
Q Consensus 873 ~~l~~~~~~~~~~~~~~~~~FeKDDd~n~hidFv~aasNLRA~ny~I~~~~~~~~K~iAG~IIPAIATTtA~VaGl~~lE 952 (1093)
.|+.||+||.. |++||++.+|+||..|+|+..+++.+++++|+||||||||||+|+|++++|
T Consensus 608 ----------------~~~~~d~~~~~--~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~i~p~i~~~~aiig~~~a~e 669 (805)
T 2nvu_B 608 ----------------EGVPLDGDDPE--HIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATE 669 (805)
T ss_dssp ----------------TTCCCCTTCHH--HHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHH
T ss_pred ----------------CcccCCCCCHH--HHHHHHHHHHHHHHHhCCCCcCHHHHHHHhcccccccchHHHHHHHHHHHH
Confidence 13345666554 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCC-Ccccccccccccccc-ccccc-CCCCCCccccCCcceeEEeEEEeCCCCcHHHHHHHHHHc---CCceee
Q 001356 953 LYKVLDGGH-KLEDYRNTFANLALP-LFSMA-EPVPPKVFKHQDMSWTVWDRWILRDNPTLRQLLQWLQDK---GLNAYS 1026 (1093)
Q Consensus 953 l~K~l~~~~-~~~~~rn~f~nla~p-~~~~~-eP~~~~~~~~~~~~~t~wd~~~v~~~~TL~~li~~~~~~---~l~~~~ 1026 (1093)
++|+|.|.. ++..+. .|--+... ...+. ++.|.|. .|+ +.|+++.+.+++||++|+++|.++ +++.+|
T Consensus 670 ~ik~l~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~C~--~C~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (805)
T 2nvu_B 670 VFKIATSAYIPLNNYL-VFNDVDGLYTYTFEAERKENCP--ACS---QLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPA 743 (805)
T ss_dssp HHHHHHCSSCCCCSEE-EEECSBSCEEEEECCCCCTTCT--TTS---CCCEEEEECTTSBHHHHHHHHHHCTTTCCSSCE
T ss_pred HHHHHhccccccCceE-EecCCCCcccccccCCCCCCCC--eeC---ceeEEEEECCcChHHHHHHHHHhhhccCcccce
Confidence 999999853 343321 11111111 11111 1222222 222 458889998899999999999886 689999
Q ss_pred eec----CCceeeccCCcc----hhhcccCcHHHHH
Q 001356 1027 ISY----GSCLLFNSMFPR----HKERMDKKVVDLV 1054 (1093)
Q Consensus 1027 i~~----g~~~LY~~~~~~----~~~~l~~~l~~l~ 1054 (1093)
|++ |+++||++++|+ +++||+|+|+||.
T Consensus 744 ~~~~~~~~~~~ly~~~~~~~~~~~~~~l~~~l~~l~ 779 (805)
T 2nvu_B 744 ITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKELG 779 (805)
T ss_dssp EEEEETTEEEEEECCSSHHHHHHHGGGGGSBTTTTT
T ss_pred EEEEccCCCcEEEecCccchhhhhHhhhcCCHHHcC
Confidence 988 689999998774 6789999999993
No 8
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=1.8e-35 Score=337.92 Aligned_cols=165 Identities=24% Similarity=0.358 Sum_probs=154.4
Q ss_pred cCcchhhhhccCHHHHHHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccc
Q 001356 485 NSRYDAQISVFGSKLQKKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQA 564 (1093)
Q Consensus 485 ~~Rydrqi~l~G~~~q~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~ 564 (1093)
..||+||+++||.++|++|++++|+||||||+||++|++|+++|| |+|+|+|+|.|+.+||+|||||+++|||++
T Consensus 16 ~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gv-----g~itlvD~d~V~~sNL~rq~~~~~~diG~~ 90 (346)
T 1y8q_A 16 AAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGV-----KGLTMLDHEQVTPEDPGAQFLIRTGSVGRN 90 (346)
T ss_dssp HHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEECCCBCCSSCGGGCTTSCSSCTTSB
T ss_pred HHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CEEEEEECCCcchhhCCCCCccccccCcCC
Confidence 479999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhCCCCEEEEEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceEeccccCcccce
Q 001356 565 KSTVAASAAALINPHLNTEALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLESGTLGAKCNT 644 (1093)
Q Consensus 565 Ka~va~~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~sgt~G~~G~v 644 (1093)
||++++++|+++||+++|+++..++.+ ..++|++++|+||+|+||..+|.+++++|+.+++|+|.+|+.|+.|++
T Consensus 91 Ka~~~~~~l~~lnp~v~v~~~~~~~~~-----~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i~~~~~G~~G~v 165 (346)
T 1y8q_A 91 RAEASLERAQNLNPMVDVKVDTEDIEK-----KPESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFFTGDVFGYHGYT 165 (346)
T ss_dssp HHHHHHHHHHHTCTTSEEEEECSCGGG-----CCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEEEEEEEEBTEEEE
T ss_pred HHHHHHHHHHhHCCCeEEEEEecccCc-----chHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEeecccEEEE
Confidence 999999999999999999999987754 235789999999999999999999999999999999999999999999
Q ss_pred EEEeCCcccccCcCCC
Q 001356 645 QMVIPHLTENYGASRD 660 (1093)
Q Consensus 645 ~v~ip~~t~~y~~~~~ 660 (1093)
.+.++ ...|+.|..+
T Consensus 166 ~~d~~-~~~~~~~~~~ 180 (346)
T 1y8q_A 166 FANLG-EHEFVEEKTK 180 (346)
T ss_dssp EEECS-EEEEEEECC-
T ss_pred EEecC-CCCEEEcCCC
Confidence 99887 4677777533
No 9
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=100.00 E-value=1.2e-35 Score=355.79 Aligned_cols=190 Identities=23% Similarity=0.352 Sum_probs=173.3
Q ss_pred cCcchhhhhccCHHHHHHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccc
Q 001356 485 NSRYDAQISVFGSKLQKKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQA 564 (1093)
Q Consensus 485 ~~Rydrqi~l~G~~~q~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~ 564 (1093)
..||+||+++||.++|++|++++|+||||||+||++||||+++|| |+|+|+|+|+|+.|||+|||||+++|||++
T Consensus 12 ~~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGV-----g~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~ 86 (531)
T 1tt5_A 12 EQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGI-----GSFTIIDGNQVSGEDAGNNFFLQRSSIGKN 86 (531)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTC-----SEEEEECCCBBCHHHHHHCTTCCGGGBTSB
T ss_pred HHHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCC-----CeEEEEeCCEechhhcccCccCChhhcCcH
Confidence 369999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhCCCCEEEEEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceEeccccCcccce
Q 001356 565 KSTVAASAAALINPHLNTEALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLESGTLGAKCNT 644 (1093)
Q Consensus 565 Ka~va~~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~sgt~G~~G~v 644 (1093)
||++++++|+++||+++|+++...+.+..+ ...+|++++|+||+|+||..+|.+++++|+.+++|+|++|+.|+.|++
T Consensus 87 Ka~~a~~~l~~lNp~v~v~~~~~~~~~~~~--~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v 164 (531)
T 1tt5_A 87 RAEAAMEFLQELNSDVSGSFVEESPENLLD--NDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYM 164 (531)
T ss_dssp HHHHHHHHHHTTCTTSBCCEESSCHHHHHH--SCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCcchhhh--hhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEEEecCCeEEE
Confidence 999999999999999999999876643111 235789999999999999999999999999999999999999999999
Q ss_pred EEEeCCcccccCcCCCCCCCCCCcccccCCCCChhhHHHH
Q 001356 645 QMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTW 684 (1093)
Q Consensus 645 ~v~ip~~t~~y~~~~~p~~~~~p~Ct~~~~P~~~~hci~w 684 (1093)
.+++|. ..++.+ +|+++..+.|++++||..++||-.+
T Consensus 165 ~~~~p~-~~~~d~--~~~~~~~~lr~~~p~P~~~~~~~~~ 201 (531)
T 1tt5_A 165 RIIIKE-HPVIES--HPDNALEDLRLDKPFPELREHFQSY 201 (531)
T ss_dssp EEECSC-EEESCC--CCSSCCCCCCSSSCCHHHHHHHHTC
T ss_pred EEEcCC-ceeccC--CCCCCCCcccccCCCCCchhhhhcc
Confidence 999994 455554 4556778999999999999999654
No 10
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=100.00 E-value=8.2e-33 Score=323.35 Aligned_cols=282 Identities=18% Similarity=0.226 Sum_probs=211.6
Q ss_pred hhhhhhhhccCHH-------------HHH-HhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceec
Q 001356 89 DLHSRQLAVYGRE-------------TMR-RLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIF 154 (1093)
Q Consensus 89 ~~YsRQi~l~G~~-------------~q~-kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~ 154 (1093)
.||.++-++|+.+ +++ +|++++|+|+|+||+|+++|++|+++|||+|+|+|+|.|+.+||+|||++
T Consensus 7 ~r~~~vntl~~~~g~~~g~gf~~g~e~~~~~L~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~ 86 (434)
T 1tt5_B 7 GRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLF 86 (434)
T ss_dssp TTTHHHHHHHHSCCSSCCTTCCCCSSHHHHHHHTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTC
T ss_pred hhhccceEEEcCCCcccccccccCHHHHHHHhcCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCC
Confidence 4666666665444 465 45999999999999999999999999999999999999999999999999
Q ss_pred ccCcccchHHHHHHHHHHHhCCCcEEEEeecccc---hhhhcCCceEEEecCCHHHHHHHHHHHHhc------------C
Q 001356 155 SEDDVGKNRALASIQKLQELNNAVAISALTTELT---KEKLSDFQAVVFTDISLEKAVEFDDYCHNH------------Q 219 (1093)
Q Consensus 155 ~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l~---~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~------------~ 219 (1093)
+++|+|++||++++++|+++||+|+|+++...++ .+++++||+||+|.|+.+.+..||++|+.. +
T Consensus 87 ~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~~~~~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~~~g~~~~~~~ 166 (434)
T 1tt5_B 87 RPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSI 166 (434)
T ss_dssp CGGGTTSBHHHHHHHHHHHHSTTCCCEEEESCGGGBCHHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCBSSSCBCGGGC
T ss_pred ChhHcCcHHHHHHHHHHHhhCCCCEEEEEecccchhhHHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhccccccccccC
Confidence 9999999999999999999999999999987764 368999999999999999999999999984 8
Q ss_pred CCcceEeeeecceeEEEEeecCCceEEecCCCCCCccceeccccCCCCCceeecccccccccCCCeEEEeEeecccccCC
Q 001356 220 PPIAFIKSEVRGLFGNIFCDFGPEFTVFDVDGEEPHTGIIASISNDNPPLISCVDDERIEFQDGDLVVFSEVHGMTELND 299 (1093)
Q Consensus 220 ~~ip~I~~~~~G~~G~vf~d~g~~f~v~d~~ge~p~~~~i~~I~~~~p~lv~~~~~~~h~~~dgd~v~f~ev~gm~~ln~ 299 (1093)
+|||++++.|+.|++++..+.. .|. ..|+-+ .
T Consensus 167 --iPli~~~~~g~~G~v~v~~p~~---------t~C--------------y~C~~~---------------------~-- 198 (434)
T 1tt5_B 167 --VPLIDGGTEGFKGNARVILPGM---------TAC--------------IECTLE---------------------L-- 198 (434)
T ss_dssp --CCEEEEEEETTEEEEEEECTTT---------SCC--------------GGGGGG---------------------G--
T ss_pred --CcEEEeccccceeEEEEECCCC---------CCC--------------cccccC---------------------C--
Confidence 9999999999999999876421 000 001000 0
Q ss_pred CCCeeeeccCCcccccccCcccccccccCCeEEEeecCeeecccchHHhhcCCCCccccccccCCCcchHHHHHHHHHH-
Q 001356 300 GKPRKVKNARPYSFSIDEDTTNYSAYEKGGIVTQVKQPKIINFKPLREALKDPGDFLLSDFSKFDRPPVLHLAFQALDK- 378 (1093)
Q Consensus 300 ~~~~~i~~~~~~~~~i~~dt~~f~~y~~gg~~~qvk~p~~~~f~sL~e~l~~p~~~~~~d~~k~~r~~~l~~~~~al~~- 378 (1093)
.| .. .....+++.. .| +. .-|.+..|...
T Consensus 199 -~p---------------~~------------------~~~p~Ct~~~---~p------------~~-~~h~i~~a~~i~ 228 (434)
T 1tt5_B 199 -YP---------------PQ------------------VNFPMCTIAS---MP------------RL-PEHCIEYVRMLQ 228 (434)
T ss_dssp -SC---------------CC------------------CCCCHHHHHH---CC------------CS-HHHHHHHHHHTH
T ss_pred -CC---------------Cc------------------CCCccccccc---CC------------cc-hhHHHHHHHHHH
Confidence 00 00 0000011111 11 11 12222222222
Q ss_pred HHHHhCCC-CCC---CCHHHHHHHHHHHHHHHhhcCCccccccCHHHHHHHHhhccCccCchhhhhccchhHHHHHhhcc
Q 001356 379 FIQELGRF-PVA---GSEEDAQKIISLFTNINDNLADERVEEIDHKLLCHFAFGARAVLNPMAAMFGGIVGQEVVKACSG 454 (1093)
Q Consensus 379 F~~~~gr~-P~~---~~~~D~~~~~~ia~~i~~~~~~~~~~~i~~~li~~~~~~~~~el~PvaA~iGGiaAQEVIKaiTg 454 (1093)
|.+.+... |.. .+.++.+.+.+.+++.++.++. ..++...++.++....+.++|++|++||+.|||+||++||
T Consensus 229 ~~~~~~~~~~~~~d~d~~~~~~~v~~~a~~~~~~~gi---~~~~~~~~~gv~~~iipaia~t~aiig~l~a~EaiK~l~g 305 (434)
T 1tt5_B 229 WPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNI---RGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATS 305 (434)
T ss_dssp HHHSCTTCTTCCCCTTCHHHHHHHHHHHHHHHHHTTC---CCCCHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhhcccccccccCCCcHHHHHHHHHHHHHHHHHcCC---CccCHHHHHhHhhccCcccccHHHHHHHHHHHHHHHHHhC
Confidence 22222111 111 2356777888888888777664 3456778888888888899999999999999999999999
Q ss_pred CcccccceeeccCCCCC
Q 001356 455 KFHPLLQFFYFDSVESL 471 (1093)
Q Consensus 455 kf~PI~q~~~fD~~e~l 471 (1093)
+..|++++++||+....
T Consensus 306 ~~~~l~~~l~~d~~~~~ 322 (434)
T 1tt5_B 306 AYIPLNNYLVFNDVDGL 322 (434)
T ss_dssp CSCCCCSEEEEECSBSC
T ss_pred CCcccCceEEEEcCCCc
Confidence 99999999999998765
No 11
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=100.00 E-value=6.9e-34 Score=315.66 Aligned_cols=165 Identities=25% Similarity=0.409 Sum_probs=127.3
Q ss_pred cCcchhhhhc--cCH-HHHHHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCcc
Q 001356 485 NSRYDAQISV--FGS-KLQKKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNI 561 (1093)
Q Consensus 485 ~~Rydrqi~l--~G~-~~q~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dv 561 (1093)
+--|+|||.| ||. ++|++|++++|+||||||+||+++++|+++|| |+|+|+|+|+||.|||+||| |+++||
T Consensus 13 ~~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGV-----G~i~lvD~D~Ve~sNL~Rq~-~~~~di 86 (292)
T 3h8v_A 13 GLVPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGI-----GKLLLFDYDKVELANMNRLF-FQPHQA 86 (292)
T ss_dssp -------------------CGGGGCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEECCCBC-------------CCT
T ss_pred CCCchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCC-----CEEEEECCCccChhhccccc-CChhhc
Confidence 4579999988 998 89999999999999999999999999999999 99999999999999999997 689999
Q ss_pred ccchHHHHHHHHHHhCCCCEEEEEecccCccccccchhhhh-----------ccCCEEEEccCCHHHHHHHhhccccccc
Q 001356 562 GQAKSTVAASAAALINPHLNTEALQIRANPETENVFNDTFW-----------ENLNVVVNALDNVNARLYIDQRCLYFQK 630 (1093)
Q Consensus 562 G~~Ka~va~~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~-----------~~~DvVi~alDn~~aR~~i~~~c~~~~~ 630 (1093)
|++|+++++++++++||+++|+++..++.+.. + + ++|+ +++|+||+|+||+++|.++|+.|+.+++
T Consensus 87 G~~Ka~aa~~~L~~iNP~v~v~~~~~~l~~~~-~-~-~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~ 163 (292)
T 3h8v_A 87 GLSKVQAAEHTLRNINPDVLFEVHNYNITTVE-N-F-QHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQ 163 (292)
T ss_dssp TSBHHHHHHHHHHHHCTTSEEEEECCCTTSHH-H-H-HHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTC
T ss_pred CchHHHHHHHHHHhhCCCcEEEEecccCCcHH-H-H-HHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCC
Confidence 99999999999999999999999999887521 1 1 2344 6899999999999999999999999999
Q ss_pred ceEeccccC--cccceEEEeCCcccccCcC
Q 001356 631 PLLESGTLG--AKCNTQMVIPHLTENYGAS 658 (1093)
Q Consensus 631 pli~sgt~G--~~G~v~v~ip~~t~~y~~~ 658 (1093)
|+|++|+.| +.|++.+++|+.|+||.|.
T Consensus 164 Pli~~gv~~~~~~Gqv~~~~pg~t~Cy~Cl 193 (292)
T 3h8v_A 164 TWMESGVSENAVSGHIQLIIPGESACFACA 193 (292)
T ss_dssp CEEEEEECTTSSEEEEEEECTTTSCCTTSS
T ss_pred CEEEeeeecceeEEEEEEECCCCCCCHhhc
Confidence 999999986 8999999999999999995
No 12
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=99.98 E-value=7.7e-33 Score=303.10 Aligned_cols=165 Identities=31% Similarity=0.458 Sum_probs=155.4
Q ss_pred cCcchhhhhc--cCHHHHHHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccc
Q 001356 485 NSRYDAQISV--FGSKLQKKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIG 562 (1093)
Q Consensus 485 ~~Rydrqi~l--~G~~~q~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG 562 (1093)
.+||+||+++ ||.++|++|++++|+|||+||+||+++++|+++|| |+|+|+|.|.|+.|||+||+||+.+|||
T Consensus 6 ~~ry~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gv-----g~i~lvD~d~v~~sNL~Rq~l~~~~diG 80 (251)
T 1zud_1 6 FMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGV-----GTLVLADDDDVHLSNLQRQILFTTEDID 80 (251)
T ss_dssp HHHTHHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTC-----SEEEEECCCBCCGGGTTTCTTCCGGGTT
T ss_pred HHHhhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCC-----CeEEEEeCCCcccccCCCCccCChhhCC
Confidence 3799999999 99999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred cchHHHHHHHHHHhCCCCEEEEEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceEeccccCccc
Q 001356 563 QAKSTVAASAAALINPHLNTEALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLESGTLGAKC 642 (1093)
Q Consensus 563 ~~Ka~va~~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~sgt~G~~G 642 (1093)
++|+++++++++++||+++|+++..++.+++ . .++++++|+||+|+||..+|.++++.|+..++|+|++++.|+.|
T Consensus 81 ~~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~--~--~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~~~~~g~~G 156 (251)
T 1zud_1 81 RPKSQVSQQRLTQLNPDIQLTALQQRLTGEA--L--KDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGG 156 (251)
T ss_dssp SBHHHHHHHHHHHHCTTSEEEEECSCCCHHH--H--HHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCCEEEEEEEBTEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeccCCHHH--H--HHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCCEEEEeccccce
Confidence 9999999999999999999999988776532 1 46788999999999999999999999999999999999999999
Q ss_pred ceEEEeCCc-ccccCcC
Q 001356 643 NTQMVIPHL-TENYGAS 658 (1093)
Q Consensus 643 ~v~v~ip~~-t~~y~~~ 658 (1093)
++.++.|.. ++||.|.
T Consensus 157 ~v~~~~p~~~~~c~~cl 173 (251)
T 1zud_1 157 QLMVLTPPWEQGCYRCL 173 (251)
T ss_dssp EEEEECTTCTTCCHHHH
T ss_pred EEEEEccCCCCCcEEEe
Confidence 999999987 6899883
No 13
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=99.97 E-value=9.2e-31 Score=331.22 Aligned_cols=277 Identities=17% Similarity=0.226 Sum_probs=212.6
Q ss_pred hhccCHHHHHHh-hcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHH
Q 001356 95 LAVYGRETMRRL-FASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQE 173 (1093)
Q Consensus 95 i~l~G~~~q~kL-~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~e 173 (1093)
-+.+|.++|+++ ++++|+|||+||+|+++|++|+++|||+|+|+|.|.|+.+||+|||+++++|||++||++++++|++
T Consensus 397 ~~~~g~~~~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~ 476 (805)
T 2nvu_B 397 DFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLND 476 (805)
T ss_dssp TCCCCSHHHHHHHHTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHH
Confidence 345899999988 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCcEEEEeecccch---hhhcCCceEEEecCCHHHHHHHHHHHHhc------------CCCcceEeeeecceeEEEEe
Q 001356 174 LNNAVAISALTTELTK---EKLSDFQAVVFTDISLEKAVEFDDYCHNH------------QPPIAFIKSEVRGLFGNIFC 238 (1093)
Q Consensus 174 LNp~V~V~~~~~~l~~---~~l~~~dvVV~~~~~~~~~~~ln~~c~~~------------~~~ip~I~~~~~G~~G~vf~ 238 (1093)
+||+|+|+++...+++ +++++||+||+|.|+.+.+..||++|+.. + +|+|.+++.|+.|++++
T Consensus 477 ~np~~~v~~~~~~~~~~~~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~--~p~i~~~~~g~~G~~~~ 554 (805)
T 2nvu_B 477 RVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSI--VPLIDGGTEGFKGNARV 554 (805)
T ss_dssp HSTTCEEEEEESCGGGSCHHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGC--CCEEEEEEETTEEEEEE
T ss_pred HCCCCEEEEEeccccccHHHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccC--CcEEEeccccCceeEEE
Confidence 9999999999887754 68899999999999999999999999984 8 99999999999999998
Q ss_pred ecCCceEEecCCCCCCccceeccccCCCCCceeecccccccccCCCeEEEeEeecccccCCCCCeeeeccCCcccccccC
Q 001356 239 DFGPEFTVFDVDGEEPHTGIIASISNDNPPLISCVDDERIEFQDGDLVVFSEVHGMTELNDGKPRKVKNARPYSFSIDED 318 (1093)
Q Consensus 239 d~g~~f~v~d~~ge~p~~~~i~~I~~~~p~lv~~~~~~~h~~~dgd~v~f~ev~gm~~ln~~~~~~i~~~~~~~~~i~~d 318 (1093)
..+..-.|+ .|+-. . .| .
T Consensus 555 ~~p~~~~c~-----------------------~c~~~---------------------~---~p---------------~ 572 (805)
T 2nvu_B 555 ILPGMTACI-----------------------ECTLE---------------------L---YP---------------P 572 (805)
T ss_dssp ECTTTSCCT-----------------------TTSGG---------------------G---SC---------------C
T ss_pred ECCCCCCce-----------------------eccCC---------------------C---CC---------------C
Confidence 864310000 00000 0 00 0
Q ss_pred cccccccccCCeEEEeecCeeecccchHHhhcCCCCccccccccCCCcchHHHHHHHHHHHHHHhCCC---C-CCCCHHH
Q 001356 319 TTNYSAYEKGGIVTQVKQPKIINFKPLREALKDPGDFLLSDFSKFDRPPVLHLAFQALDKFIQELGRF---P-VAGSEED 394 (1093)
Q Consensus 319 t~~f~~y~~gg~~~qvk~p~~~~f~sL~e~l~~p~~~~~~d~~k~~r~~~l~~~~~al~~F~~~~gr~---P-~~~~~~D 394 (1093)
. .....+++....+.| ...+..+.+.+ |..++... + ...+.++
T Consensus 573 ~------------------~~~~~c~~~~~~~~~-------------~~~i~~a~~~~--~~~~~~~~~~~~~d~~~~~~ 619 (805)
T 2nvu_B 573 Q------------------VNFPMCTIASMPRLP-------------EHCIEYVRMLQ--WPKEQPFGEGVPLDGDDPEH 619 (805)
T ss_dssp C------------------CCCCHHHHHHCCCSH-------------HHHHHHHHHTH--HHHHCTTSTTCCCCTTCHHH
T ss_pred C------------------CCCCccccCCCCCCc-------------cHHHHHHHHhh--cccccCCCCcccCCCCCHHH
Confidence 0 000112222211101 11122222222 23333211 1 1124667
Q ss_pred HHHHHHHHHHHHhhcCCccccccCHHHHHHHHhhccCccCchhhhhccchhHHHHHhhccCcccccceeeccCCCCC
Q 001356 395 AQKIISLFTNINDNLADERVEEIDHKLLCHFAFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLLQFFYFDSVESL 471 (1093)
Q Consensus 395 ~~~~~~ia~~i~~~~~~~~~~~i~~~li~~~~~~~~~el~PvaA~iGGiaAQEVIKaiTgkf~PI~q~~~fD~~e~l 471 (1093)
.+.+.+.+++.+...+. ..++...++.++....+.++|++|++||+.|||+||++||+..|++++++||+..+.
T Consensus 620 ~~~~~~~~~~~~~~~gi---~~~~~~~~~~~~~~i~p~i~~~~aiig~~~a~e~ik~l~~~~~~l~~~~~~~~~~~~ 693 (805)
T 2nvu_B 620 IQWIFQKSLERASQYNI---RGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGL 693 (805)
T ss_dssp HHHHHHHHHHHHHHTTC---CCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHCSSCCCCSEEEEECSBSC
T ss_pred HHHHHHHHHHHHHHhCC---CCcCHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHhccccccCceEEecCCCCc
Confidence 78888888888777664 345677888888888899999999999999999999999999999999999998765
No 14
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=99.97 E-value=1.6e-31 Score=292.30 Aligned_cols=164 Identities=29% Similarity=0.448 Sum_probs=154.3
Q ss_pred Ccchhhhhc--cCHHHHHHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCcccc
Q 001356 486 SRYDAQISV--FGSKLQKKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQ 563 (1093)
Q Consensus 486 ~Rydrqi~l--~G~~~q~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~ 563 (1093)
.||+||+++ ||.++|++|++++|+|||+||+|++++++|+++|+ |+|+|+|.|.|+.|||+||+||+++|||+
T Consensus 10 ~ry~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv-----~~i~lvD~d~v~~sNl~Rq~l~~~~diG~ 84 (249)
T 1jw9_B 10 LRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGV-----GNLTLLDFDTVSLSNLQRQTLHSDATVGQ 84 (249)
T ss_dssp HHTHHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEECCCBCCGGGGGTCTTCCGGGTTS
T ss_pred HHhhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCC-----CeEEEEcCCCcccccCCcccccChhhcCc
Confidence 799999999 99999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred chHHHHHHHHHHhCCCCEEEEEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceEeccccCcccc
Q 001356 564 AKSTVAASAAALINPHLNTEALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLESGTLGAKCN 643 (1093)
Q Consensus 564 ~Ka~va~~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~sgt~G~~G~ 643 (1093)
+|+++++++++++||+++|+++..++.+++ . .++++++|+||+|+||.++|..+++.|+..++|+|+++..|+.|+
T Consensus 85 ~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~--~--~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~~~~~g~~g~ 160 (249)
T 1jw9_B 85 PKVESARDALTRINPHIAITPVNALLDDAE--L--AALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQ 160 (249)
T ss_dssp BHHHHHHHHHHHHCTTSEEEEECSCCCHHH--H--HHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEEBTEEE
T ss_pred HHHHHHHHHHHHHCCCcEEEEEeccCCHhH--H--HHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEeeeccceEE
Confidence 999999999999999999999988776422 1 457889999999999999999999999999999999999999999
Q ss_pred eEEEeCCc-ccccCcC
Q 001356 644 TQMVIPHL-TENYGAS 658 (1093)
Q Consensus 644 v~v~ip~~-t~~y~~~ 658 (1093)
+.++.|.. ++||.|.
T Consensus 161 v~~~~p~~~~~c~~c~ 176 (249)
T 1jw9_B 161 ITVFTYQDGEPCYRCL 176 (249)
T ss_dssp EEEECCCTTCCCTHHH
T ss_pred EEEEeCCCCCCceEEE
Confidence 99998876 6899883
No 15
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=99.97 E-value=1.6e-30 Score=297.81 Aligned_cols=165 Identities=25% Similarity=0.436 Sum_probs=151.5
Q ss_pred cCcchhhhh---ccC--HHH-HHHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCccccccc
Q 001356 485 NSRYDAQIS---VFG--SKL-QKKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRD 558 (1093)
Q Consensus 485 ~~Rydrqi~---l~G--~~~-q~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~ 558 (1093)
.+||+||+. +|| .++ |++|++++|+|||+||+||+++++|+++|| |+|+|+|.|.|+.|||+||+||+.
T Consensus 92 ~~rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGv-----g~i~lvD~D~Ve~sNL~Rq~l~~~ 166 (353)
T 3h5n_A 92 NNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGI-----GEIILIDNDQIENTNLTRQVLFSE 166 (353)
T ss_dssp TSTTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEEECCBCCGGGGGTCTTCCG
T ss_pred HHHhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCC-----CeEEEECCCcCcccccccccCCCh
Confidence 389999986 466 455 999999999999999999999999999999 999999999999999999999999
Q ss_pred CccccchHHHHHHHHHHhCCCCEEEEEecccCccccccchhhhhccCCEEEEccCCHH-HHHHHhhcccccccceEeccc
Q 001356 559 WNIGQAKSTVAASAAALINPHLNTEALQIRANPETENVFNDTFWENLNVVVNALDNVN-ARLYIDQRCLYFQKPLLESGT 637 (1093)
Q Consensus 559 ~dvG~~Ka~va~~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~-aR~~i~~~c~~~~~pli~sgt 637 (1093)
+|||++|+++++++++++||+++|+++..++.+++. + .+ ++++|+||+|+||+. +|.++|+.|+.+++|+|.+|.
T Consensus 167 ~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~--~-~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~~~ 242 (353)
T 3h5n_A 167 DDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTD--L-HK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGY 242 (353)
T ss_dssp GGTTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGG--G-GG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHCCChHHHHHHHHHHHHCCCCeEEEeecccCchhh--h-hH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEEEE
Confidence 999999999999999999999999999999876542 2 23 789999999999999 999999999999999999999
Q ss_pred cCcccceEE-EeCCcccccCcC
Q 001356 638 LGAKCNTQM-VIPHLTENYGAS 658 (1093)
Q Consensus 638 ~G~~G~v~v-~ip~~t~~y~~~ 658 (1093)
.|..|.+.. ++|+.++||.|.
T Consensus 243 ~g~~g~~g~~~~p~~~~C~~C~ 264 (353)
T 3h5n_A 243 VNDIAVFGPLYVPGKTGCYECQ 264 (353)
T ss_dssp ETTEEEEEEEECTTTSCCTTTT
T ss_pred eCCEEEEEEEEcCCCCCChhhc
Confidence 999998754 569999999985
No 16
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=99.97 E-value=9.1e-30 Score=307.02 Aligned_cols=147 Identities=20% Similarity=0.337 Sum_probs=138.6
Q ss_pred hhhccCHHHHHHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHH
Q 001356 94 QLAVYGRETMRRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQE 173 (1093)
Q Consensus 94 Qi~l~G~~~q~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~e 173 (1093)
|+++||.++|++|++++|+|||+||+|+++|+||+++|||+|+|+|.|.|+.+||+|||+++++|||++||++++++|++
T Consensus 3 qi~l~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~ 82 (640)
T 1y8q_B 3 LSRGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQ 82 (640)
T ss_dssp ---CCCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHT
T ss_pred hhhhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCcEEEEeecccc-----hhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEeeeecceeEEEEeecCC
Q 001356 174 LNNAVAISALTTELT-----KEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKSEVRGLFGNIFCDFGP 242 (1093)
Q Consensus 174 LNp~V~V~~~~~~l~-----~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~~~~G~~G~vf~d~g~ 242 (1093)
+||+|+|+++...++ .+++.+||+||+|.|+.+.+..++++|+.++ +|||.+++.|+.|++++..+.
T Consensus 83 iNP~v~V~a~~~~i~~~~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~--iPlI~~g~~G~~G~v~vi~p~ 154 (640)
T 1y8q_B 83 FYPKANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAAD--VPLIESGTAGYLGQVTTIKKG 154 (640)
T ss_dssp TCTTCEEEEEESCTTSTTSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHT--CCEEEEEEETTEEEEEEECTT
T ss_pred HCCCCeEEEEecccchhhhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcC--CCEEEEEEecccceEEEECCC
Confidence 999999999988764 3678999999999999999999999999999 999999999999999998753
No 17
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=99.96 E-value=1.4e-29 Score=277.27 Aligned_cols=153 Identities=26% Similarity=0.404 Sum_probs=145.6
Q ss_pred Cchhhhhhhhhhhc--cCHHHHHHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccc
Q 001356 84 SDIDEDLHSRQLAV--YGRETMRRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGK 161 (1093)
Q Consensus 84 ~~~~~~~YsRQi~l--~G~~~q~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk 161 (1093)
++.+.+||+||+++ ||.++|++|++++|+|+|+||+|++++++|+++|||+|+|+|.|.|+.+||+|||+++++|+|+
T Consensus 2 ~~~e~~ry~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~ 81 (251)
T 1zud_1 2 NDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDR 81 (251)
T ss_dssp CHHHHHHTHHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTS
T ss_pred CHHHHHHhhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCC
Confidence 35567899999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCcEEEEeecccch----hhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEeeeecceeEEEE
Q 001356 162 NRALASIQKLQELNNAVAISALTTELTK----EKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKSEVRGLFGNIF 237 (1093)
Q Consensus 162 ~Ka~a~~~~L~eLNp~V~V~~~~~~l~~----~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~~~~G~~G~vf 237 (1093)
+||++++++|+++||+++|+++...+++ ++++++|+||+|.++.+.+..++++|++++ +|||.+++.|+.|+++
T Consensus 82 ~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~--~p~i~~~~~g~~G~v~ 159 (251)
T 1zud_1 82 PKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALN--TPLITASAVGFGGQLM 159 (251)
T ss_dssp BHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTT--CCEEEEEEEBTEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhC--CCEEEEeccccceEEE
Confidence 9999999999999999999999877754 467889999999999999999999999999 9999999999999998
Q ss_pred e
Q 001356 238 C 238 (1093)
Q Consensus 238 ~ 238 (1093)
+
T Consensus 160 ~ 160 (251)
T 1zud_1 160 V 160 (251)
T ss_dssp E
T ss_pred E
Confidence 6
No 18
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=99.96 E-value=7.7e-30 Score=287.36 Aligned_cols=160 Identities=20% Similarity=0.273 Sum_probs=142.0
Q ss_pred hccCHHHHHHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHH
Q 001356 493 SVFGSKLQKKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASA 572 (1093)
Q Consensus 493 ~l~G~~~q~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~ 572 (1093)
|+++..++++|+++||+||||||+||+++++|+++|| |+|+|+|.|+|+.|||+|||||+.+|+|++|+++++++
T Consensus 22 Rll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGV-----g~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~ 96 (340)
T 3rui_A 22 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV-----RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAAS 96 (340)
T ss_dssp HTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHH
T ss_pred hhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCC-----CEEEEecCCEeccccccccccCChhhcChHHHHHHHHH
Confidence 6677777889999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHhCCCCEEEEEecccCc-------cccccc----hhhhhccCCEEEEccCCHHHHHHHhhcccccccceEeccccCcc
Q 001356 573 AALINPHLNTEALQIRANP-------ETENVF----NDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLESGTLGAK 641 (1093)
Q Consensus 573 l~~~np~~~i~~~~~~v~~-------~~~~~~----~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~sgt~G~~ 641 (1093)
++++||+++|+++...+.. +....+ ..++++++|+||+|+||+++|.+++++|+.+++|+|+++ .|+.
T Consensus 97 L~~inP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~plI~aa-~G~~ 175 (340)
T 3rui_A 97 LKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFD 175 (340)
T ss_dssp HHHHCTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTTCEEEEEE-ECSS
T ss_pred HHHhCCCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcCCcEEEee-ecce
Confidence 9999999999999866521 000001 146889999999999999999999999999999999876 9999
Q ss_pred cceEEEe-------CCcccccCcC
Q 001356 642 CNTQMVI-------PHLTENYGAS 658 (1093)
Q Consensus 642 G~v~v~i-------p~~t~~y~~~ 658 (1093)
|++.++. |..++||.|.
T Consensus 176 G~l~v~~g~~~~~~~~~~~Cy~C~ 199 (340)
T 3rui_A 176 SYLVMRHGNRDEQSSKQLGCYFCH 199 (340)
T ss_dssp EEEEEECCCCCSSCCCCBCCGGGG
T ss_pred EEEEEeecccccCCCCCCCeeeeC
Confidence 9998763 4578999995
No 19
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.7e-30 Score=326.21 Aligned_cols=185 Identities=23% Similarity=0.316 Sum_probs=162.7
Q ss_pred ccCcchhhhhccCHHHHHHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCcccc
Q 001356 484 LNSRYDAQISVFGSKLQKKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQ 563 (1093)
Q Consensus 484 ~~~Rydrqi~l~G~~~q~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~ 563 (1093)
...||+||+++||.++|++|++++|+||||||+||++|+||+++|| |+|+|+|.|.|+.+||+||||++.+|||+
T Consensus 6 d~~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGV-----g~itlvD~D~V~~sNL~RQ~l~~~~dvG~ 80 (1015)
T 3cmm_A 6 DESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGV-----KSMTVFDPEPVQLADLSTQFFLTEKDIGQ 80 (1015)
T ss_dssp CHHHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCC-----SEEEEECCSBCCGGGGGTCTTCCGGGTTS
T ss_pred hhHhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCC-----CeEEEecCCEechhhhccccccChhhcCh
Confidence 3479999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred chHHHHHHHHHHhCCCCEEEEEecccCccccccchhhhhccCCEEEEccC-CHHHHHHHhhcccccccceEeccccCccc
Q 001356 564 AKSTVAASAAALINPHLNTEALQIRANPETENVFNDTFWENLNVVVNALD-NVNARLYIDQRCLYFQKPLLESGTLGAKC 642 (1093)
Q Consensus 564 ~Ka~va~~~l~~~np~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alD-n~~aR~~i~~~c~~~~~pli~sgt~G~~G 642 (1093)
+||++++++|+++||+++|+++...+. +++++++|+||+|+| |..+|..++++|+..++|+|.+++.|+.|
T Consensus 81 ~Ka~a~~~~L~~lNP~v~v~~~~~~l~--------~~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~iplI~~~~~G~~G 152 (1015)
T 3cmm_A 81 KRGDVTRAKLAELNAYVPVNVLDSLDD--------VTQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRFISSETRGLFG 152 (1015)
T ss_dssp BHHHHHHHHHTTSCTTSCEEECCCCCC--------STTGGGCSEEEECTTSCHHHHHHHHHHHHHHTCEEEEEEEETTEE
T ss_pred HHHHHHHHHHHHHCCCCeEEEecCCCC--------HHHHhcCCEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEEecccEE
Confidence 999999999999999999999987764 257889999999999 99999999999999999999999999999
Q ss_pred ceEEEeCCcccccCcCC-CC-CCCCCCcccccCCCCChhhHHHHHH
Q 001356 643 NTQMVIPHLTENYGASR-DP-PEKQAPMCTVHSFPHNIDHCLTWAR 686 (1093)
Q Consensus 643 ~v~v~ip~~t~~y~~~~-~p-~~~~~p~Ct~~~~P~~~~hci~wA~ 686 (1093)
++.+. ..+||.|.. ++ +...+.+|++ +-| .+.||+.|-+
T Consensus 153 ~v~~d---~~~~~~c~~~~~~~p~~~~i~~i-~~p-~~v~~l~~~~ 193 (1015)
T 3cmm_A 153 NTFVD---LGDEFTVLDPTGEEPRTGMVSDI-EPD-GTVTMLDDNR 193 (1015)
T ss_dssp EEEEE---CCSCEEESBSSCCCCCEEEEEEE-CTT-CEEEESTTCC
T ss_pred EEEec---CCCceEEeeCCCCCCccccccCC-CCC-ceeEeeeccc
Confidence 98653 357888842 22 2234555666 334 3578876544
No 20
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=99.95 E-value=5.1e-28 Score=264.60 Aligned_cols=155 Identities=22% Similarity=0.310 Sum_probs=146.1
Q ss_pred CCchhhhhhhhhhhc--cCHHHHHHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCccc
Q 001356 83 PSDIDEDLHSRQLAV--YGRETMRRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVG 160 (1093)
Q Consensus 83 ~~~~~~~~YsRQi~l--~G~~~q~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diG 160 (1093)
.++.+.+||+||+++ ||.++|++|++++|+|+|+||+|+++|++|+++||++|+|+|.|.|+.+||+||++++++|+|
T Consensus 4 l~~~e~~ry~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG 83 (249)
T 1jw9_B 4 LSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVG 83 (249)
T ss_dssp CCHHHHHHTHHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTT
T ss_pred CCHHHHHHhhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcC
Confidence 356667899999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhCCCcEEEEeecccch----hhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEeeeecceeEEE
Q 001356 161 KNRALASIQKLQELNNAVAISALTTELTK----EKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKSEVRGLFGNI 236 (1093)
Q Consensus 161 k~Ka~a~~~~L~eLNp~V~V~~~~~~l~~----~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~~~~G~~G~v 236 (1093)
++|+++++++|+++||.++|+++...+++ +++.++|+||+|.++.+.+..++++|++.+ +|+|++++.|+.|++
T Consensus 84 ~~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~--~p~i~~~~~g~~g~v 161 (249)
T 1jw9_B 84 QPKVESARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAK--VPLVSGAAIRMEGQI 161 (249)
T ss_dssp SBHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHT--CCEEEEEEEBTEEEE
T ss_pred cHHHHHHHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcC--CCEEEeeeccceEEE
Confidence 99999999999999999999998877653 467899999999999999999999999999 999999999999998
Q ss_pred Eee
Q 001356 237 FCD 239 (1093)
Q Consensus 237 f~d 239 (1093)
++-
T Consensus 162 ~~~ 164 (249)
T 1jw9_B 162 TVF 164 (249)
T ss_dssp EEE
T ss_pred EEE
Confidence 753
No 21
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=99.95 E-value=4.8e-28 Score=268.82 Aligned_cols=148 Identities=20% Similarity=0.299 Sum_probs=114.0
Q ss_pred hhhhhhhc--cCH-HHHHHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHH
Q 001356 90 LHSRQLAV--YGR-ETMRRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALA 166 (1093)
Q Consensus 90 ~YsRQi~l--~G~-~~q~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a 166 (1093)
-|+|||.| ||. ++|+||++++|+|||+||+|+++|++|+++|||+|+|+|.|.|+.+||+||| ++++|+|++||++
T Consensus 15 ~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~-~~~~diG~~Ka~a 93 (292)
T 3h8v_A 15 VPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLF-FQPHQAGLSKVQA 93 (292)
T ss_dssp -----------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-------------CCTTSBHHHH
T ss_pred CchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhccccc-CChhhcCchHHHH
Confidence 69999999 998 9999999999999999999999999999999999999999999999999997 5889999999999
Q ss_pred HHHHHHHhCCCcEEEEeecccch-----hhh-----------cCCceEEEecCCHHHHHHHHHHHHhcCCCcceEeeeec
Q 001356 167 SIQKLQELNNAVAISALTTELTK-----EKL-----------SDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKSEVR 230 (1093)
Q Consensus 167 ~~~~L~eLNp~V~V~~~~~~l~~-----~~l-----------~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~~~~ 230 (1093)
++++|+++||+|+|+++...+++ +++ ++||+||+|.|+++.+..||++|++++ +|||.+++.
T Consensus 94 a~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~--~Pli~~gv~ 171 (292)
T 3h8v_A 94 AEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELG--QTWMESGVS 171 (292)
T ss_dssp HHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHT--CCEEEEEEC
T ss_pred HHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhC--CCEEEeeee
Confidence 99999999999999999887753 233 689999999999999999999999999 999999987
Q ss_pred c--eeEEEEeec
Q 001356 231 G--LFGNIFCDF 240 (1093)
Q Consensus 231 G--~~G~vf~d~ 240 (1093)
| +.|++.+-.
T Consensus 172 ~~~~~Gqv~~~~ 183 (292)
T 3h8v_A 172 ENAVSGHIQLII 183 (292)
T ss_dssp TTSSEEEEEEEC
T ss_pred cceeEEEEEEEC
Confidence 6 889887654
No 22
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=99.95 E-value=1.8e-28 Score=292.21 Aligned_cols=160 Identities=20% Similarity=0.276 Sum_probs=141.4
Q ss_pred hccCHHHHHHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHH
Q 001356 493 SVFGSKLQKKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASA 572 (1093)
Q Consensus 493 ~l~G~~~q~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~ 572 (1093)
|+++..++++|++++|+||||||+||++|++|+++|| |+|+|+|.|+|+.|||+||+||+.+|||++||++|+++
T Consensus 314 Rllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGV-----G~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~ 388 (615)
T 4gsl_A 314 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV-----RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAAS 388 (615)
T ss_dssp HTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHH
T ss_pred hhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHH
Confidence 5678888899999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHhCCCCEEEEEecccC-------ccccccc----hhhhhccCCEEEEccCCHHHHHHHhhcccccccceEeccccCcc
Q 001356 573 AALINPHLNTEALQIRAN-------PETENVF----NDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLESGTLGAK 641 (1093)
Q Consensus 573 l~~~np~~~i~~~~~~v~-------~~~~~~~----~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~sgt~G~~ 641 (1093)
++++||+++|+++...+. ++....+ ..++++++|+||+|+||.++|.+++++|+.+++|+|+++ .|+.
T Consensus 389 L~~iNP~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~c~~~~~PlI~aa-lG~~ 467 (615)
T 4gsl_A 389 LKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFD 467 (615)
T ss_dssp HHHHCTTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGGTHHHHHHHHHTTCEEEEEE-ECSS
T ss_pred HHhhCCCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHHHHHHHHHHHHcCCeEEEEE-ccce
Confidence 999999999999986551 1000011 146789999999999999999999999999999999876 9999
Q ss_pred cceEEEe-------CCcccccCcC
Q 001356 642 CNTQMVI-------PHLTENYGAS 658 (1093)
Q Consensus 642 G~v~v~i-------p~~t~~y~~~ 658 (1093)
|++.+.. |..++||.|.
T Consensus 468 Gql~v~~g~~~~~~~~~~~CY~Cl 491 (615)
T 4gsl_A 468 SYLVMRHGNRDEQSSKQLGCYFCH 491 (615)
T ss_dssp EEEEEECCC------CCCCCTTTS
T ss_pred eEEEEeecccccCCCCCCCceeeC
Confidence 9987653 4578999995
No 23
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=99.95 E-value=3.2e-28 Score=290.27 Aligned_cols=167 Identities=19% Similarity=0.269 Sum_probs=145.6
Q ss_pred Ccchhhhhc-------cCHHHHHHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCccccccc
Q 001356 486 SRYDAQISV-------FGSKLQKKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRD 558 (1093)
Q Consensus 486 ~Rydrqi~l-------~G~~~q~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~ 558 (1093)
.||+||+++ ++..+|++|++++|+||||||+||++|++|+++|| |+|+|+|+|+||.|||+||+||+.
T Consensus 301 a~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGV-----G~ItLvD~D~Ve~SNL~RQ~L~~~ 375 (598)
T 3vh1_A 301 ADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV-----RKITFVDNGTVSYSNPVRQALYNF 375 (598)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTC-----CEEEEECCSBCCTTSTTTSTTCCS
T ss_pred HHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CEEEEECCCcccccccccccccch
Confidence 689988886 56667899999999999999999999999999999 999999999999999999999999
Q ss_pred CccccchHHHHHHHHHHhCCCCEEEEEecccC-------ccccccc----hhhhhccCCEEEEccCCHHHHHHHhhcccc
Q 001356 559 WNIGQAKSTVAASAAALINPHLNTEALQIRAN-------PETENVF----NDTFWENLNVVVNALDNVNARLYIDQRCLY 627 (1093)
Q Consensus 559 ~dvG~~Ka~va~~~l~~~np~~~i~~~~~~v~-------~~~~~~~----~~~f~~~~DvVi~alDn~~aR~~i~~~c~~ 627 (1093)
+|||++||++|+++|+++||+++|+++..++. .+++..+ -.++++++|+||+|+||.++|.+++++|+.
T Consensus 376 ~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~tR~lin~~c~~ 455 (598)
T 3vh1_A 376 EDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNI 455 (598)
T ss_dssp TTCSSBHHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGGGTHHHHHHHHH
T ss_pred hhcCcHHHHHHHHHHHhHCCCcEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999987752 1000001 146789999999999999999999999999
Q ss_pred cccceEeccccCcccceEEEe---C----CcccccCcC
Q 001356 628 FQKPLLESGTLGAKCNTQMVI---P----HLTENYGAS 658 (1093)
Q Consensus 628 ~~~pli~sgt~G~~G~v~v~i---p----~~t~~y~~~ 658 (1093)
+++|+|++ +.|+.|++.++- | ..++||.|.
T Consensus 456 ~~~plI~a-a~G~~Gqv~v~~g~~p~~~~~~~~Cy~Cl 492 (598)
T 3vh1_A 456 ENKTVINA-ALGFDSYLVMRHGNRDEQSSKQLGCYFCH 492 (598)
T ss_dssp TTCEEEEE-EECSSEEEEEEEC--------CBCCTTTS
T ss_pred cCCCEEEE-EECCccEEEEEccCCCccCCCCCCceeec
Confidence 99999985 689999987653 3 257899995
No 24
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=99.94 E-value=3.2e-27 Score=270.53 Aligned_cols=152 Identities=20% Similarity=0.316 Sum_probs=139.7
Q ss_pred Cchhhhhhhhhhh---ccC--HHH-HHHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccC
Q 001356 84 SDIDEDLHSRQLA---VYG--RET-MRRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSED 157 (1093)
Q Consensus 84 ~~~~~~~YsRQi~---l~G--~~~-q~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~ 157 (1093)
++.+.+||+||+. +|| .++ |++|++++|+|+|+||+|+++|++|+++|||+|+|+|.|.|+.+||+|||+++++
T Consensus 88 ~~~~~~rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~ 167 (353)
T 3h5n_A 88 NSTENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSED 167 (353)
T ss_dssp CSCTTSTTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGG
T ss_pred CHHHHHHhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChH
Confidence 3456789999976 477 456 9999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHhCCCcEEEEeecccchhh----hcCCceEEEecCCHH-HHHHHHHHHHhcCCCcceEeeeecce
Q 001356 158 DVGKNRALASIQKLQELNNAVAISALTTELTKEK----LSDFQAVVFTDISLE-KAVEFDDYCHNHQPPIAFIKSEVRGL 232 (1093)
Q Consensus 158 diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l~~~~----l~~~dvVV~~~~~~~-~~~~ln~~c~~~~~~ip~I~~~~~G~ 232 (1093)
|+|++||++++++|+++||+|+|+++...++++. +++||+||+|.|+.. .+..+|++|++++ +|||.+++.|.
T Consensus 168 diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~~~~~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~--~p~i~~~~~g~ 245 (353)
T 3h5n_A 168 DVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRAN--QPYINAGYVND 245 (353)
T ss_dssp GTTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGGGGGSCCCSEEEECCCCSTTHHHHHHHHHHHTT--CCEEEEEEETT
T ss_pred HCCChHHHHHHHHHHHHCCCCeEEEeecccCchhhhhHhccCCEEEEecCChHHHHHHHHHHHHHhC--CCEEEEEEeCC
Confidence 9999999999999999999999999988775433 789999999999988 9999999999999 99999999888
Q ss_pred eEEEE
Q 001356 233 FGNIF 237 (1093)
Q Consensus 233 ~G~vf 237 (1093)
.|++-
T Consensus 246 ~g~~g 250 (353)
T 3h5n_A 246 IAVFG 250 (353)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88763
No 25
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=99.92 E-value=2.8e-25 Score=250.27 Aligned_cols=154 Identities=16% Similarity=0.231 Sum_probs=141.1
Q ss_pred chhhhhhhhhhhccCHHHHHHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHH
Q 001356 85 DIDEDLHSRQLAVYGRETMRRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRA 164 (1093)
Q Consensus 85 ~~~~~~YsRQi~l~G~~~q~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka 164 (1093)
..|-++--..+|+|+..++++|++++|+|+|+||+|+++|++|+++|||+|+|+|.|.|+.+||+|||+++.+|+|++||
T Consensus 11 ~~~lnl~lm~wRll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka 90 (340)
T 3rui_A 11 SVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKA 90 (340)
T ss_dssp HHHHHHHHHHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHH
T ss_pred HHHHHHHHHHHhhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHH
Confidence 45556666778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEEeeccc---------------c----hhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceE
Q 001356 165 LASIQKLQELNNAVAISALTTEL---------------T----KEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFI 225 (1093)
Q Consensus 165 ~a~~~~L~eLNp~V~V~~~~~~l---------------~----~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I 225 (1093)
++++++|+++||+|+++++...+ + .+++++||+||+|.|+.+++..+|++|+.++ +|+|
T Consensus 91 ~aaa~~L~~inP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~--~plI 168 (340)
T 3rui_A 91 ELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIEN--KTVI 168 (340)
T ss_dssp HHHHHHHHHHCTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTT--CEEE
T ss_pred HHHHHHHHHhCCCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcC--CcEE
Confidence 99999999999999999987533 2 3578899999999999999999999999999 9999
Q ss_pred eeeecceeEEEEeecC
Q 001356 226 KSEVRGLFGNIFCDFG 241 (1093)
Q Consensus 226 ~~~~~G~~G~vf~d~g 241 (1093)
.+. .|+.|++++-.|
T Consensus 169 ~aa-~G~~G~l~v~~g 183 (340)
T 3rui_A 169 NAA-LGFDSYLVMRHG 183 (340)
T ss_dssp EEE-ECSSEEEEEECC
T ss_pred Eee-ecceEEEEEeec
Confidence 975 999999988543
No 26
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=99.91 E-value=6.6e-25 Score=261.82 Aligned_cols=154 Identities=15% Similarity=0.196 Sum_probs=140.6
Q ss_pred CCchhhhhhhhhhhc-------cCHHHHHHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecc
Q 001356 83 PSDIDEDLHSRQLAV-------YGRETMRRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFS 155 (1093)
Q Consensus 83 ~~~~~~~~YsRQi~l-------~G~~~q~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~ 155 (1093)
+...+-.+|+||+++ ||..+|++|++++|+|+|+||+|+++|++|+++|||+|+|+|+|.|+.+||+||++++
T Consensus 295 l~~~~la~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~ 374 (598)
T 3vh1_A 295 LDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYN 374 (598)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCC
T ss_pred cCHHHHHHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccc
Confidence 344556789999987 6777899999999999999999999999999999999999999999999999999999
Q ss_pred cCcccchHHHHHHHHHHHhCCCcEEEEeeccc---------------c----hhhhcCCceEEEecCCHHHHHHHHHHHH
Q 001356 156 EDDVGKNRALASIQKLQELNNAVAISALTTEL---------------T----KEKLSDFQAVVFTDISLEKAVEFDDYCH 216 (1093)
Q Consensus 156 ~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l---------------~----~~~l~~~dvVV~~~~~~~~~~~ln~~c~ 216 (1093)
++|||++||++++++|+++||+|+|+++...+ + +++++++|+||+|.|+.+.+..++++|+
T Consensus 375 ~~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~tR~lin~~c~ 454 (598)
T 3vh1_A 375 FEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSN 454 (598)
T ss_dssp STTCSSBHHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGGGTHHHHHHHH
T ss_pred hhhcCcHHHHHHHHHHHhHCCCcEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999987543 2 2478899999999999999999999999
Q ss_pred hcCCCcceEeeeecceeEEEEee
Q 001356 217 NHQPPIAFIKSEVRGLFGNIFCD 239 (1093)
Q Consensus 217 ~~~~~ip~I~~~~~G~~G~vf~d 239 (1093)
+++ +|+|.+ +.|+.|++++-
T Consensus 455 ~~~--~plI~a-a~G~~Gqv~v~ 474 (598)
T 3vh1_A 455 IEN--KTVINA-ALGFDSYLVMR 474 (598)
T ss_dssp HTT--CEEEEE-EECSSEEEEEE
T ss_pred hcC--CCEEEE-EECCccEEEEE
Confidence 999 999986 78999998764
No 27
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=99.91 E-value=2.1e-25 Score=265.90 Aligned_cols=146 Identities=15% Similarity=0.221 Sum_probs=135.3
Q ss_pred hhhhccCHHHHHHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHH
Q 001356 93 RQLAVYGRETMRRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQ 172 (1093)
Q Consensus 93 RQi~l~G~~~q~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~ 172 (1093)
...|+|+..++++|++++|+|||+||+|+++|++|+++|||+|+|+|.|.|+.+||+||++++++|+|++||++++++|+
T Consensus 311 m~wRllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~ 390 (615)
T 4gsl_A 311 MKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLK 390 (615)
T ss_dssp HHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHH
T ss_pred HHHhhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHH
Confidence 34488999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCcEEEEeeccc---------------c----hhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEeeeeccee
Q 001356 173 ELNNAVAISALTTEL---------------T----KEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKSEVRGLF 233 (1093)
Q Consensus 173 eLNp~V~V~~~~~~l---------------~----~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~~~~G~~ 233 (1093)
++||+|+|+++...+ + .++++++|+||+|.|+.+.+..++++|+.++ +|+|.+. .|+.
T Consensus 391 ~iNP~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~c~~~~--~PlI~aa-lG~~ 467 (615)
T 4gsl_A 391 RIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIEN--KTVINAA-LGFD 467 (615)
T ss_dssp HHCTTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGGTHHHHHHHHHTT--CEEEEEE-ECSS
T ss_pred hhCCCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHHHHHHHHHHHHcC--CeEEEEE-ccce
Confidence 999999999987533 2 2468899999999999999999999999999 9999975 9999
Q ss_pred EEEEeecC
Q 001356 234 GNIFCDFG 241 (1093)
Q Consensus 234 G~vf~d~g 241 (1093)
|++.+..|
T Consensus 468 Gql~v~~g 475 (615)
T 4gsl_A 468 SYLVMRHG 475 (615)
T ss_dssp EEEEEECC
T ss_pred eEEEEeec
Confidence 99988654
No 28
>2v31_A Ubiquitin-activating enzyme E1 X; ligase, phosphorylation, catalytic domain, heteronuclear first catalytic cysteine half-domain, E1 protein; NMR {Mus musculus}
Probab=99.90 E-value=5.3e-25 Score=208.30 Aligned_cols=111 Identities=46% Similarity=0.856 Sum_probs=108.6
Q ss_pred ecCCceEEecCCCCCCccceeccccCCCCCceeecccccccccCCCeEEEeEeecccccCCCCCeeeeccCCcccccccC
Q 001356 239 DFGPEFTVFDVDGEEPHTGIIASISNDNPPLISCVDDERIEFQDGDLVVFSEVHGMTELNDGKPRKVKNARPYSFSIDED 318 (1093)
Q Consensus 239 d~g~~f~v~d~~ge~p~~~~i~~I~~~~p~lv~~~~~~~h~~~dgd~v~f~ev~gm~~ln~~~~~~i~~~~~~~~~i~~d 318 (1093)
|||++|+|.|.+||+|.+++|.+|+++.+++|+|+++.+|+|+|||+|+|++|+||+++|+++|++|++++||+|+| +|
T Consensus 1 DFG~~F~V~D~dGE~p~~~~I~~Is~~~~g~Vt~~~~~~H~l~dGD~V~FseV~GM~eLN~~~p~~i~v~~p~tf~I-~d 79 (112)
T 2v31_A 1 EFGEEMVLTDSNGEQPLSAMVSMVTKDNPGVVTCLDEARHGFETGDFVSFSEVQGMIQLNGCQPMEIKVLGPYTFSI-CD 79 (112)
T ss_dssp CCSCCCCCCCCCCSSCCEEEEEEECCSSSEEEEECTTCCCCCCTTCEEEECSEESCCTTGGGCCEEEEECSSSEEEE-SC
T ss_pred CCCCCcEEECCCCCccceeeeeeeecCCCcEEEEecCCccCCcCCCEEEEEeeEcchhhCCCcceEEEEcCCCEEEE-ec
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999 79
Q ss_pred cccccccccCCeEEEeecCeeecccchHHhhc
Q 001356 319 TTNYSAYEKGGIVTQVKQPKIINFKPLREALK 350 (1093)
Q Consensus 319 t~~f~~y~~gg~~~qvk~p~~~~f~sL~e~l~ 350 (1093)
|+.|++|.+||+++|||+|++++|+||+++|.
T Consensus 80 ts~f~~Y~~GG~~tqVK~p~~~~FksL~~~l~ 111 (112)
T 2v31_A 80 TSNFSDYIRGGIVSQVKVPKKISFKSLPASLV 111 (112)
T ss_dssp CTTSCCCCEECEEECCCCCCSCCCCCCSCCSC
T ss_pred ccccccccCCeEEEEEeCCeEEcccCHHHHhh
Confidence 99999999999999999999999999999875
No 29
>1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus}
Probab=98.42 E-value=5e-07 Score=99.17 Aligned_cols=55 Identities=36% Similarity=0.487 Sum_probs=42.1
Q ss_pred HHHHHHHhhhcCCCCccCCCCCCcccCCCCCCCcccccCCcch--hHHHHHHHHHHHHHHcCCCCC
Q 001356 756 FADRVKQLTFTFPENATTSNGTPFWSAPKRFPRPLQFSVDDLS--HLQFLMAASILRAETYGIPIP 819 (1093)
Q Consensus 756 F~~~i~~Ll~~~p~d~~~~~g~~fws~~kr~P~pl~fd~~~~~--h~~fi~~~a~l~a~~~~i~~~ 819 (1093)
|...+++|+..+|..... . .....|+.||.+|.. |++||.|||||||.+|||+..
T Consensus 207 ~~~~~~~L~~~l~~~~~~-------~--~~~~~pl~FeKDDd~N~hmdFItAaSNLRA~nY~I~~~ 263 (276)
T 1z7l_A 207 DDSRLEELKATLPSPDKL-------P--GFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDISPA 263 (276)
T ss_dssp CSHHHHHHHHHSCCGGGS-------T--TCCCCCCCCCSSCTTSSHHHHHHHHHHHHHHHTTCCCC
T ss_pred cHHHHHHHHHHhhhhhhc-------c--cccCCCcceecCCCcccHHHHHHHHHHHHHHHcCCCcC
Confidence 445677777776653211 1 123568999999998 999999999999999999875
No 30
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.25 E-value=0.00055 Score=72.97 Aligned_cols=99 Identities=11% Similarity=0.086 Sum_probs=72.1
Q ss_pred HhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEee
Q 001356 105 RLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALT 184 (1093)
Q Consensus 105 kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~ 184 (1093)
.|++.+|||||.|.+|...++.|..+|. .+++++++... . .+.|.+. -.++...
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~------------------~----l~~l~~~---~~i~~i~ 81 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSA------------------E----INEWEAK---GQLRVKR 81 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCH------------------H----HHHHHHT---TSCEEEC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCH------------------H----HHHHHHc---CCcEEEE
Confidence 5788999999999999999999999997 79999863210 0 1122221 2345556
Q ss_pred cccchhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEeeeecce
Q 001356 185 TELTKEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKSEVRGL 232 (1093)
Q Consensus 185 ~~l~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~~~~G~ 232 (1093)
..+.++.+.++|+||.++++.+.-..+.+.|+ .+ ||+-.++.-..
T Consensus 82 ~~~~~~dL~~adLVIaAT~d~~~N~~I~~~ak-~g--i~VNvvD~p~~ 126 (223)
T 3dfz_A 82 KKVGEEDLLNVFFIVVATNDQAVNKFVKQHIK-ND--QLVNMASSFSD 126 (223)
T ss_dssp SCCCGGGSSSCSEEEECCCCTHHHHHHHHHSC-TT--CEEEC-----C
T ss_pred CCCCHhHhCCCCEEEECCCCHHHHHHHHHHHh-CC--CEEEEeCCccc
Confidence 67777889999999999988888888888998 88 77666554333
No 31
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.02 E-value=0.001 Score=73.45 Aligned_cols=79 Identities=18% Similarity=0.247 Sum_probs=63.0
Q ss_pred HhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEee
Q 001356 105 RLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALT 184 (1093)
Q Consensus 105 kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~ 184 (1093)
.++.++|+|+|+||+|..++..|...|+++|+|++.+ ..|++.+++.+....|.+.+....
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~-------------------~~~a~~la~~~~~~~~~~~i~~~~ 184 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD-------------------TSRAQALADVINNAVGREAVVGVD 184 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS-------------------HHHHHHHHHHHHHHHTSCCEEEEC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC-------------------HHHHHHHHHHHHhhcCCceEEEcC
Confidence 4678999999999999999999999999999999753 248889999999888887777654
Q ss_pred cccchhhhcCCceEEEec
Q 001356 185 TELTKEKLSDFQAVVFTD 202 (1093)
Q Consensus 185 ~~l~~~~l~~~dvVV~~~ 202 (1093)
.+--++.+.++|+||.|+
T Consensus 185 ~~~l~~~l~~~DiVInaT 202 (283)
T 3jyo_A 185 ARGIEDVIAAADGVVNAT 202 (283)
T ss_dssp STTHHHHHHHSSEEEECS
T ss_pred HHHHHHHHhcCCEEEECC
Confidence 211124566788888776
No 32
>1y8x_B Ubiquitin-activating enzyme E1C; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: c.111.1.2 PDB: 3fn1_A
Probab=96.87 E-value=0.00045 Score=63.73 Aligned_cols=53 Identities=15% Similarity=0.298 Sum_probs=45.7
Q ss_pred EEeCCCCcHHHHHHHHHHc---CCceeeeecC----CceeeccCCc----chhhcccCcHHHHH
Q 001356 1002 WILRDNPTLRQLLQWLQDK---GLNAYSISYG----SCLLFNSMFP----RHKERMDKKVVDLV 1054 (1093)
Q Consensus 1002 ~~v~~~~TL~~li~~~~~~---~l~~~~i~~g----~~~LY~~~~~----~~~~~l~~~l~~l~ 1054 (1093)
+++..+.||++|||++.+. .+..++|+.+ .+.||....| .++.||+|+|.||.
T Consensus 9 l~v~~~~TL~~lid~L~~~p~~qlk~PSltt~~~~~~k~LYmq~pp~Lee~Tr~NL~k~l~eLg 72 (98)
T 1y8x_B 9 IQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYMQSVTSIEERTRPNLSKTLKELG 72 (98)
T ss_dssp EECCTTCBHHHHHHHHHHCTTCCCSSCEEEEEETTEEEEEECSSCHHHHHHHHHHHHSBSGGGT
T ss_pred EEECCchhHHHHHHHHHhChHhhccCCeeeeecCCCCCeEEEeCcHHHHHHhHhhhhCCHHHhC
Confidence 5677789999999999996 8888999888 8999998865 45789999999993
No 33
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.82 E-value=0.0013 Score=72.76 Aligned_cols=79 Identities=22% Similarity=0.246 Sum_probs=62.5
Q ss_pred HHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 502 KLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 502 ~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
.+.+++++|+|+||+|..++..|+..|+ ++|+|++.+ ..|++.+++.+...+|.++
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~-----~~v~i~~R~-------------------~~~a~~la~~~~~~~~~~~ 179 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGV-----QKLQVADLD-------------------TSRAQALADVINNAVGREA 179 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTC-----SEEEEECSS-------------------HHHHHHHHHHHHHHHTSCC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-----CEEEEEECC-------------------HHHHHHHHHHHHhhcCCce
Confidence 3578899999999999999999999999 899998643 3588888888888888777
Q ss_pred EEEEecccCccccccchhhhhccCCEEEEcc
Q 001356 582 TEALQIRANPETENVFNDTFWENLNVVVNAL 612 (1093)
Q Consensus 582 i~~~~~~v~~~~~~~~~~~f~~~~DvVi~al 612 (1093)
+.++.. . .+ .+.+.++|+||+|+
T Consensus 180 i~~~~~--~----~l--~~~l~~~DiVInaT 202 (283)
T 3jyo_A 180 VVGVDA--R----GI--EDVIAAADGVVNAT 202 (283)
T ss_dssp EEEECS--T----TH--HHHHHHSSEEEECS
T ss_pred EEEcCH--H----HH--HHHHhcCCEEEECC
Confidence 766541 1 11 23457899999997
No 34
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.58 E-value=0.0055 Score=67.25 Aligned_cols=118 Identities=14% Similarity=0.196 Sum_probs=73.8
Q ss_pred HhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcc--eecccCcccchHHHHHHHHHHHh-C-----C
Q 001356 105 RLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSN--FIFSEDDVGKNRALASIQKLQEL-N-----N 176 (1093)
Q Consensus 105 kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rq--f~~~~~diGk~Ka~a~~~~L~eL-N-----p 176 (1093)
.|++.+|||+|+|.+|...++.|..+|. +|+++|++... ++... -+.... +. ++. ....+.+ | .
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga-~VtViap~~~~--~l~~~~~~l~~~~--~~-~~~--~~~~~~~~~~~~~~~ 81 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSPDLHK--SIIPKFGKFIQNK--DQ-PDY--REDAKRFINPNWDPT 81 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEEEECT--THHHHHCGGGC----------------CEEECTTCCTT
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCC-EEEEEcCCCCc--chhHHHHHHHhcc--cc-ccc--cchhhcccccccccc
Confidence 4678999999999999999999999996 69999874421 00000 000000 00 000 0000000 0 1
Q ss_pred CcEE-EEeecccchhhhc------CCceEEEecCCHHHHHHHHHHHHhc---CCCcceEeeeecce
Q 001356 177 AVAI-SALTTELTKEKLS------DFQAVVFTDISLEKAVEFDDYCHNH---QPPIAFIKSEVRGL 232 (1093)
Q Consensus 177 ~V~V-~~~~~~l~~~~l~------~~dvVV~~~~~~~~~~~ln~~c~~~---~~~ip~I~~~~~G~ 232 (1093)
.-.| ......+.++.+. ++|+||.++++.+.-..+...|+++ + +|+-.++.--+
T Consensus 82 ~g~i~~~i~~~~~~~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~--i~VNvvd~pel 145 (274)
T 1kyq_A 82 KNEIYEYIRSDFKDEYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQ--QLVNVADKPDL 145 (274)
T ss_dssp SCCCSEEECSSCCGGGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTT--SEEEETTCGGG
T ss_pred cCCeeEEEcCCCCHHHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCC--cEEEECCCccc
Confidence 1234 5556666666777 8999999999888888999999998 8 77755444333
No 35
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.58 E-value=0.0035 Score=58.48 Aligned_cols=95 Identities=19% Similarity=0.182 Sum_probs=62.0
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEE
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEA 584 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~ 584 (1093)
.++|+|+|+|++|..+++.|...|. -+++++|.+. .|.+.+. .+.+.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~-----~~v~~~~r~~-------------------~~~~~~~------~~~~~~-- 52 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSN-----YSVTVADHDL-------------------AALAVLN------RMGVAT-- 52 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSS-----EEEEEEESCH-------------------HHHHHHH------TTTCEE--
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC-----ceEEEEeCCH-------------------HHHHHHH------hCCCcE--
Confidence 4689999999999999999999995 4888888431 1222111 233333
Q ss_pred EecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceEec
Q 001356 585 LQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLES 635 (1093)
Q Consensus 585 ~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~s 635 (1093)
+...+... +.+ .+.++++|+||+|+... ....+...|...++++++.
T Consensus 53 ~~~d~~~~-~~~--~~~~~~~d~vi~~~~~~-~~~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 53 KQVDAKDE-AGL--AKALGGFDAVISAAPFF-LTPIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp EECCTTCH-HHH--HHHTTTCSEEEECSCGG-GHHHHHHHHHHTTCEEECC
T ss_pred EEecCCCH-HHH--HHHHcCCCEEEECCCch-hhHHHHHHHHHhCCCEEEe
Confidence 33333321 111 24567899999999543 3455666778888888753
No 36
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.57 E-value=0.01 Score=70.07 Aligned_cols=100 Identities=13% Similarity=0.107 Sum_probs=74.7
Q ss_pred HhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEee
Q 001356 105 RLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALT 184 (1093)
Q Consensus 105 kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~ 184 (1093)
.|++.+|+|+|.|.+|...++.|..+|. +++++|.+... .++++-..-.++...
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga-~V~vi~~~~~~-------------------------~~~~l~~~~~i~~~~ 62 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIP-------------------------QFTVWANEGMLTLVE 62 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCH-------------------------HHHHHHTTTSCEEEE
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEcCCCCH-------------------------HHHHHHhcCCEEEEE
Confidence 3678999999999999999999999996 79999973211 122222112355556
Q ss_pred cccchhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEeeeecce
Q 001356 185 TELTKEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKSEVRGL 232 (1093)
Q Consensus 185 ~~l~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~~~~G~ 232 (1093)
..+.++.+.++|+||.++++.+....+.+.|++++ ||+-.++--.+
T Consensus 63 ~~~~~~~l~~~~lVi~at~~~~~n~~i~~~a~~~~--i~vn~~d~~e~ 108 (457)
T 1pjq_A 63 GPFDETLLDSCWLAIAATDDDTVNQRVSDAAESRR--IFCNVVDAPKA 108 (457)
T ss_dssp SSCCGGGGTTCSEEEECCSCHHHHHHHHHHHHHTT--CEEEETTCTTS
T ss_pred CCCCccccCCccEEEEcCCCHHHHHHHHHHHHHcC--CEEEECCCccc
Confidence 66777788899999999988877888999999999 88644444433
No 37
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.57 E-value=0.0029 Score=67.36 Aligned_cols=92 Identities=16% Similarity=0.203 Sum_probs=67.0
Q ss_pred HHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 502 KLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 502 ~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
.|++++|+|||+|.+|..-++.|...|. +++||+++.-+ .+.+.. . ...+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA------~VtVvap~~~~---------------------~l~~l~-~-~~~i- 77 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA------AITVVAPTVSA---------------------EINEWE-A-KGQL- 77 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC------CEEEECSSCCH---------------------HHHHHH-H-TTSC-
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC------EEEEECCCCCH---------------------HHHHHH-H-cCCc-
Confidence 4788999999999999999999999997 99999864110 011111 1 1233
Q ss_pred EEEEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceE
Q 001356 582 TEALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLL 633 (1093)
Q Consensus 582 i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli 633 (1093)
+.+... |.++.+.++|+||.|+|+...-..+...|. .++|+-
T Consensus 78 -~~i~~~--------~~~~dL~~adLVIaAT~d~~~N~~I~~~ak-~gi~VN 119 (223)
T 3dfz_A 78 -RVKRKK--------VGEEDLLNVFFIVVATNDQAVNKFVKQHIK-NDQLVN 119 (223)
T ss_dssp -EEECSC--------CCGGGSSSCSEEEECCCCTHHHHHHHHHSC-TTCEEE
T ss_pred -EEEECC--------CCHhHhCCCCEEEECCCCHHHHHHHHHHHh-CCCEEE
Confidence 333322 224456789999999999999999999998 888854
No 38
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.29 E-value=0.022 Score=52.89 Aligned_cols=89 Identities=20% Similarity=0.193 Sum_probs=61.3
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeeccc
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTEL 187 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l 187 (1093)
..+|+|+|+|++|..+++.|...|..+++++|.+. .+++. +. .+.+.+. ..++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~-------------------~~~~~----~~--~~~~~~~--~~d~ 57 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL-------------------AALAV----LN--RMGVATK--QVDA 57 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH-------------------HHHHH----HH--TTTCEEE--ECCT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH-------------------HHHHH----HH--hCCCcEE--EecC
Confidence 35899999999999999999999977899988531 12222 22 2333332 2222
Q ss_pred c-----hhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEe
Q 001356 188 T-----KEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIK 226 (1093)
Q Consensus 188 ~-----~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~ 226 (1093)
+ .+.+.++|+||.+.. ......+.+.|.+.+ ++++.
T Consensus 58 ~~~~~~~~~~~~~d~vi~~~~-~~~~~~~~~~~~~~g--~~~~~ 98 (118)
T 3ic5_A 58 KDEAGLAKALGGFDAVISAAP-FFLTPIIAKAAKAAG--AHYFD 98 (118)
T ss_dssp TCHHHHHHHTTTCSEEEECSC-GGGHHHHHHHHHHTT--CEEEC
T ss_pred CCHHHHHHHHcCCCEEEECCC-chhhHHHHHHHHHhC--CCEEE
Confidence 2 135678999999884 444567888899988 66664
No 39
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.19 E-value=0.027 Score=54.64 Aligned_cols=92 Identities=16% Similarity=0.173 Sum_probs=62.2
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeec
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTT 185 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~ 185 (1093)
+...+|+|+|+|.+|..+++.|...|. +++++|.+. .++ +.+.+. .+. +...
T Consensus 4 ~~~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~-------------------~~~----~~~~~~--~~~--~~~g 55 (141)
T 3llv_A 4 NGRYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSK-------------------EKI----ELLEDE--GFD--AVIA 55 (141)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHH----HHHHHT--TCE--EEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCH-------------------HHH----HHHHHC--CCc--EEEC
Confidence 345789999999999999999999997 788888631 122 223332 222 2333
Q ss_pred ccc-hh-----hhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEee
Q 001356 186 ELT-KE-----KLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKS 227 (1093)
Q Consensus 186 ~l~-~~-----~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~ 227 (1093)
+.+ ++ .+.++|+||.+..+.+....+...+++.+ .+.|.+
T Consensus 56 d~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~--~~~iia 101 (141)
T 3llv_A 56 DPTDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVS--DVYAIV 101 (141)
T ss_dssp CTTCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHC--CCCEEE
T ss_pred CCCCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhC--CceEEE
Confidence 332 22 24578999999988887778888888887 455543
No 40
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.11 E-value=0.022 Score=56.46 Aligned_cols=99 Identities=16% Similarity=0.131 Sum_probs=62.2
Q ss_pred HHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCC----cceecccCcccchHHHHHHHHHHHhCCCcE
Q 001356 104 RRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLS----SNFIFSEDDVGKNRALASIQKLQELNNAVA 179 (1093)
Q Consensus 104 ~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~----rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~ 179 (1093)
+++...+|+|+|+|.+|..+++.|...|. .++++|.+.-....+. ..++. .|... . +.|
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~--~d~~~--~----~~l-------- 77 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVV--GDAAE--F----ETL-------- 77 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEE--SCTTS--H----HHH--------
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEE--ecCCC--H----HHH--------
Confidence 46677899999999999999999999997 8999987543222221 00000 01000 0 001
Q ss_pred EEEeecccchhhhcCCceEEEecCCHHHHHHHHHHHHh-cCCCcceEeeee
Q 001356 180 ISALTTELTKEKLSDFQAVVFTDISLEKAVEFDDYCHN-HQPPIAFIKSEV 229 (1093)
Q Consensus 180 V~~~~~~l~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~-~~~~ip~I~~~~ 229 (1093)
....+.++|+||.|..+......+...++. .+ ...|.+.+
T Consensus 78 --------~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~--~~~iv~~~ 118 (155)
T 2g1u_A 78 --------KECGMEKADMVFAFTNDDSTNFFISMNARYMFN--VENVIARV 118 (155)
T ss_dssp --------HTTTGGGCSEEEECSSCHHHHHHHHHHHHHTSC--CSEEEEEC
T ss_pred --------HHcCcccCCEEEEEeCCcHHHHHHHHHHHHHCC--CCeEEEEE
Confidence 111256789999999887777777778887 44 34444333
No 41
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.08 E-value=0.017 Score=56.10 Aligned_cols=93 Identities=17% Similarity=0.156 Sum_probs=60.2
Q ss_pred hcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEE
Q 001356 504 EEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTE 583 (1093)
Q Consensus 504 ~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~ 583 (1093)
...+|+|+|+|.+|..+++.|...|. +++++|.|. .+++ .++.. .. .
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~------~V~~id~~~-------------------~~~~----~~~~~--~~--~ 51 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGK------KVLAVDKSK-------------------EKIE----LLEDE--GF--D 51 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC------CEEEEESCH-------------------HHHH----HHHHT--TC--E
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC------eEEEEECCH-------------------HHHH----HHHHC--CC--c
Confidence 45689999999999999999999997 899998541 1222 22221 22 3
Q ss_pred EEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccc
Q 001356 584 ALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKP 631 (1093)
Q Consensus 584 ~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~p 631 (1093)
.+..+... ...+...-..++|+||.++++......+-..+...+.+
T Consensus 52 ~~~gd~~~--~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~ 97 (141)
T 3llv_A 52 AVIADPTD--ESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVSDV 97 (141)
T ss_dssp EEECCTTC--HHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCC
T ss_pred EEECCCCC--HHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhCCc
Confidence 33333332 11111112467999999999988877777766655433
No 42
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.99 E-value=0.016 Score=64.82 Aligned_cols=80 Identities=14% Similarity=0.208 Sum_probs=56.8
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeec
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTT 185 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~ 185 (1093)
++.++|+|+|+||.|..++..|...|+++|+|++.+.- ...||+.+++.+.+..+ +.+.+...
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~----------------~~~~a~~la~~~~~~~~-~~v~~~~~ 208 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDD----------------FFEKAVAFAKRVNENTD-CVVTVTDL 208 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSST----------------HHHHHHHHHHHHHHHSS-CEEEEEET
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCc----------------hHHHHHHHHHHhhhccC-cceEEech
Confidence 56789999999999999999999999999999875310 02478888888876543 34444332
Q ss_pred c-c--chhhhcCCceEEEec
Q 001356 186 E-L--TKEKLSDFQAVVFTD 202 (1093)
Q Consensus 186 ~-l--~~~~l~~~dvVV~~~ 202 (1093)
. + ..+.+.++|+||.|+
T Consensus 209 ~~l~~~~~~l~~~DiIINaT 228 (312)
T 3t4e_A 209 ADQHAFTEALASADILTNGT 228 (312)
T ss_dssp TCHHHHHHHHHHCSEEEECS
T ss_pred HhhhhhHhhccCceEEEECC
Confidence 1 1 123456778877765
No 43
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.95 E-value=0.02 Score=64.17 Aligned_cols=80 Identities=15% Similarity=0.258 Sum_probs=58.0
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeec
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTT 185 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~ 185 (1093)
++.++|+|+|+||+|..++..|...|+++|+|++.+. + -..||+.+++.+.+..+ +.+.+...
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~--------------~--~~~~a~~la~~~~~~~~-~~~~~~~~ 214 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD--------------D--FYANAEKTVEKINSKTD-CKAQLFDI 214 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS--------------T--THHHHHHHHHHHHHHSS-CEEEEEET
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC--------------c--hHHHHHHHHHHhhhhcC-CceEEecc
Confidence 5678999999999999999999999999999997531 0 02478888888877654 45554432
Q ss_pred c-cc--hhhhcCCceEEEec
Q 001356 186 E-LT--KEKLSDFQAVVFTD 202 (1093)
Q Consensus 186 ~-l~--~~~l~~~dvVV~~~ 202 (1093)
. .+ .+.+.++|+||.|+
T Consensus 215 ~~~~~l~~~l~~aDiIINaT 234 (315)
T 3tnl_A 215 EDHEQLRKEIAESVIFTNAT 234 (315)
T ss_dssp TCHHHHHHHHHTCSEEEECS
T ss_pred chHHHHHhhhcCCCEEEECc
Confidence 1 11 13456788888776
No 44
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.92 E-value=0.036 Score=53.28 Aligned_cols=88 Identities=14% Similarity=0.150 Sum_probs=55.0
Q ss_pred HHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEe
Q 001356 104 RRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISAL 183 (1093)
Q Consensus 104 ~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~ 183 (1093)
.++...+|+|+|+|++|..+++.|...|. +++++|.+.-....+ .+. ...+ .
T Consensus 2 ~~~~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~-----------------------~~~--~~~~--~ 53 (144)
T 2hmt_A 2 GRIKNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAY-----------------------ASY--ATHA--V 53 (144)
T ss_dssp ----CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTT-----------------------TTT--CSEE--E
T ss_pred CCCcCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH-----------------------HHh--CCEE--E
Confidence 35667789999999999999999999996 688888643211111 111 1111 1
Q ss_pred eccc-ch----h-hhcCCceEEEecCC-HHHHHHHHHHHHhcC
Q 001356 184 TTEL-TK----E-KLSDFQAVVFTDIS-LEKAVEFDDYCHNHQ 219 (1093)
Q Consensus 184 ~~~l-~~----~-~l~~~dvVV~~~~~-~~~~~~ln~~c~~~~ 219 (1093)
..+. +. + .+.++|+||.+..+ ......+...+++.+
T Consensus 54 ~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~ 96 (144)
T 2hmt_A 54 IANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELD 96 (144)
T ss_dssp ECCTTCHHHHHTTTGGGCSEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred EeCCCCHHHHHhcCCCCCCEEEECCCCchHHHHHHHHHHHHcC
Confidence 1111 11 1 25678999998875 355566778888888
No 45
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.74 E-value=0.023 Score=56.36 Aligned_cols=94 Identities=16% Similarity=0.222 Sum_probs=57.2
Q ss_pred HHHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCC
Q 001356 500 QKKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPH 579 (1093)
Q Consensus 500 q~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~ 579 (1093)
-+++.+.+|+|+|+|.+|..+++.|...|. +++++|.+.-....+.++. .
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~------~V~vid~~~~~~~~~~~~~------------------------g 63 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH------SVVVVDKNEYAFHRLNSEF------------------------S 63 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESCGGGGGGSCTTC------------------------C
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCC------eEEEEECCHHHHHHHHhcC------------------------C
Confidence 356677899999999999999999999997 8999987643222221000 1
Q ss_pred CEEEEEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccc
Q 001356 580 LNTEALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLY 627 (1093)
Q Consensus 580 ~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~ 627 (1093)
.. .+...... ...+...-+.++|+||.|+.+......+-..+..
T Consensus 64 ~~--~~~~d~~~--~~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~ 107 (155)
T 2g1u_A 64 GF--TVVGDAAE--FETLKECGMEKADMVFAFTNDDSTNFFISMNARY 107 (155)
T ss_dssp SE--EEESCTTS--HHHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHH
T ss_pred Cc--EEEecCCC--HHHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHH
Confidence 11 11111111 0111111246799999999998877766665544
No 46
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.70 E-value=0.021 Score=54.98 Aligned_cols=36 Identities=25% Similarity=0.474 Sum_probs=30.1
Q ss_pred HHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 502 KLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 502 ~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
++...+|+|+|+|.+|..+++.|...|. +++++|.+
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~------~v~~~d~~ 38 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGH------EVLAVDIN 38 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTC------CCEEEESC
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 3566789999999999999999999997 78898865
No 47
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.60 E-value=0.026 Score=61.76 Aligned_cols=73 Identities=29% Similarity=0.316 Sum_probs=59.2
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeec
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTT 185 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~ 185 (1093)
++.++|+|+|+||.+..++-.|...|+++|+|++.+ ..|++.+++.+....+...+....
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt-------------------~~ra~~la~~~~~~~~~~~~~~~~- 182 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPS-------------------TARMGAVCELLGNGFPGLTVSTQF- 182 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC-------------------HHHHHHHHHHHHHHCTTCEEESCC-
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCC-------------------HHHHHHHHHHHhccCCcceehhhh-
Confidence 467899999999999999999999999999998642 348999999999888876654322
Q ss_pred ccchhhhcCCceEEEec
Q 001356 186 ELTKEKLSDFQAVVFTD 202 (1093)
Q Consensus 186 ~l~~~~l~~~dvVV~~~ 202 (1093)
+.+.++|+||.|+
T Consensus 183 ----~~~~~~dliiNaT 195 (269)
T 3tum_A 183 ----SGLEDFDLVANAS 195 (269)
T ss_dssp ----SCSTTCSEEEECS
T ss_pred ----hhhhcccccccCC
Confidence 2356789999876
No 48
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.58 E-value=0.02 Score=56.59 Aligned_cols=88 Identities=10% Similarity=0.060 Sum_probs=60.7
Q ss_pred hcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhC-CCcEEEEeec
Q 001356 107 FASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELN-NAVAISALTT 185 (1093)
Q Consensus 107 ~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLN-p~V~V~~~~~ 185 (1093)
.+.+|+|+|+|.+|..+++.|...|. .++++|.+.- .+++ .+.+.. ..+.+ ...
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~------------------~~~~----~~~~~~~~~~~~--i~g 56 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPE------------------DDIK----QLEQRLGDNADV--IPG 56 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCH------------------HHHH----HHHHHHCTTCEE--EES
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCCh------------------HHHH----HHHHhhcCCCeE--EEc
Confidence 46789999999999999999999996 6888886310 1222 232222 23333 333
Q ss_pred ccc------hhhhcCCceEEEecCCHHHHHHHHHHHHhcC
Q 001356 186 ELT------KEKLSDFQAVVFTDISLEKAVEFDDYCHNHQ 219 (1093)
Q Consensus 186 ~l~------~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~ 219 (1093)
+.+ ...+.++|+||.+..+.+....+...+++.+
T Consensus 57 d~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~ 96 (153)
T 1id1_A 57 DSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMS 96 (153)
T ss_dssp CTTSHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHHC
Confidence 322 2246789999999988887788888888874
No 49
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.44 E-value=0.025 Score=63.34 Aligned_cols=83 Identities=14% Similarity=0.116 Sum_probs=58.1
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEE
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNT 582 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i 582 (1093)
+.+++++|+|+||+|..++..|+..|+ .+|+|++.+. --..|++.+++.+....+ +.+
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga-----~~V~i~nR~~----------------~~~~~a~~la~~~~~~~~-~~~ 209 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGV-----KEISIFNRKD----------------DFYANAEKTVEKINSKTD-CKA 209 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTC-----SEEEEEECSS----------------TTHHHHHHHHHHHHHHSS-CEE
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCC-----CEEEEEECCC----------------chHHHHHHHHHHhhhhcC-Cce
Confidence 577899999999999999999999999 8999986320 002477778887776654 455
Q ss_pred EEEecccCccccccchhhhhccCCEEEEcc
Q 001356 583 EALQIRANPETENVFNDTFWENLNVVVNAL 612 (1093)
Q Consensus 583 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~al 612 (1093)
.+.. +.+ .+.+ .+.+.++|+||+|+
T Consensus 210 ~~~~--~~~-~~~l--~~~l~~aDiIINaT 234 (315)
T 3tnl_A 210 QLFD--IED-HEQL--RKEIAESVIFTNAT 234 (315)
T ss_dssp EEEE--TTC-HHHH--HHHHHTCSEEEECS
T ss_pred EEec--cch-HHHH--HhhhcCCCEEEECc
Confidence 4442 111 0111 13456899999997
No 50
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.28 E-value=0.071 Score=50.96 Aligned_cols=84 Identities=15% Similarity=0.130 Sum_probs=55.4
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeeccc-
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTEL- 187 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l- 187 (1093)
.+|+|+|+|.+|..+++.|...|. +++++|.+. .+++ .+.+.. .+.+ ...+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~-------------------~~~~----~~~~~~-~~~~--~~~d~~ 57 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDK-------------------DICK----KASAEI-DALV--INGDCT 57 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHH----HHHHHC-SSEE--EESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH-------------------HHHH----HHHHhc-CcEE--EEcCCC
Confidence 589999999999999999999995 688888532 1221 222211 2221 22221
Q ss_pred -----chhhhcCCceEEEecCCHHHHHHHHHHHHhcC
Q 001356 188 -----TKEKLSDFQAVVFTDISLEKAVEFDDYCHNHQ 219 (1093)
Q Consensus 188 -----~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~ 219 (1093)
....+.++|+||.+..+......+...++..+
T Consensus 58 ~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 58 KIKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYG 94 (140)
T ss_dssp SHHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHHcC
Confidence 11235689999999877666666777788776
No 51
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.25 E-value=0.027 Score=53.97 Aligned_cols=88 Identities=14% Similarity=0.126 Sum_probs=53.6
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEEE
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEAL 585 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~~ 585 (1093)
.+|+|+|+|.+|..+++.|...|. +++++|.+.- +. +.+.+.. .+. .+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~------~v~~~d~~~~-------------------~~----~~~~~~~-~~~--~~ 52 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH------DIVLIDIDKD-------------------IC----KKASAEI-DAL--VI 52 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEEESCHH-------------------HH----HHHHHHC-SSE--EE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEECCHH-------------------HH----HHHHHhc-CcE--EE
Confidence 689999999999999999999987 7899884321 11 1122111 222 22
Q ss_pred ecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccc
Q 001356 586 QIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLY 627 (1093)
Q Consensus 586 ~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~ 627 (1093)
...... ...+......++|+||.|+.+......+...+..
T Consensus 53 ~~d~~~--~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~ 92 (140)
T 1lss_A 53 NGDCTK--IKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKS 92 (140)
T ss_dssp ESCTTS--HHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHH
T ss_pred EcCCCC--HHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHH
Confidence 222221 1111112256899999999987665555555443
No 52
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.07 E-value=0.018 Score=63.07 Aligned_cols=110 Identities=20% Similarity=0.315 Sum_probs=67.0
Q ss_pred HHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCc--ccccccCccccchHHHHH-HHHHH-hC
Q 001356 502 KLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSR--QFLFRDWNIGQAKSTVAA-SAAAL-IN 577 (1093)
Q Consensus 502 ~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnR--Qflf~~~dvG~~Ka~va~-~~l~~-~n 577 (1093)
.|++++|+|||+|.+|...++.|...|. +++|||.+.-+. +.. +-+.. +-+. .+. ...++ ++
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga------~VtViap~~~~~--l~~~~~~l~~--~~~~----~~~~~~~~~~~~ 75 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGC------KLTLVSPDLHKS--IIPKFGKFIQ--NKDQ----PDYREDAKRFIN 75 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTC------EEEEEEEEECTT--HHHHHCGGGC-----------------CEEEC
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCC------EEEEEcCCCCcc--hhHHHHHHHh--cccc----ccccchhhcccc
Confidence 3578999999999999999999999997 899999754211 100 00000 0000 000 00000 11
Q ss_pred CC-----CEE-EEEecccCccccccchhhhhc------cCCEEEEccCCHHHHHHHhhccccc---ccceE
Q 001356 578 PH-----LNT-EALQIRANPETENVFNDTFWE------NLNVVVNALDNVNARLYIDQRCLYF---QKPLL 633 (1093)
Q Consensus 578 p~-----~~i-~~~~~~v~~~~~~~~~~~f~~------~~DvVi~alDn~~aR~~i~~~c~~~---~~pli 633 (1093)
+. -.| ..+...+ .+..+. .+|+||.|+|+.+.-..+-..|... ++|+-
T Consensus 76 ~~~~~~~g~i~~~i~~~~--------~~~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VN 138 (274)
T 1kyq_A 76 PNWDPTKNEIYEYIRSDF--------KDEYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVN 138 (274)
T ss_dssp TTCCTTSCCCSEEECSSC--------CGGGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEE
T ss_pred cccccccCCeeEEEcCCC--------CHHHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEE
Confidence 11 122 3333222 233344 8999999999998889999999998 88873
No 53
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=94.96 E-value=0.037 Score=64.87 Aligned_cols=102 Identities=11% Similarity=0.135 Sum_probs=65.6
Q ss_pred cCcEEEEccCcchHHHHHHHHHcc-cccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEE
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMG-VSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTE 583 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~G-v~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~ 583 (1093)
..||+|||+|+||+.++..|++.+ + .-..|+++|.|... +. +.+.+ .+++
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv---~~~~I~vaD~~~~~----------------~~----~~~~~-----g~~~- 63 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDI---KPSQVTIIAAEGTK----------------VD----VAQQY-----GVSF- 63 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCC---CGGGEEEEESSCCS----------------CC----HHHHH-----TCEE-
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCC---ceeEEEEeccchhh----------------hh----HHhhc-----CCce-
Confidence 468999999999999999999974 3 01589999855421 10 01111 2333
Q ss_pred EEecccCcccc-ccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceEecccc
Q 001356 584 ALQIRANPETE-NVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLESGTL 638 (1093)
Q Consensus 584 ~~~~~v~~~~~-~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~sgt~ 638 (1093)
....++.++. ..+ ..++++.|+|||+....... -+-+.|...++-+|+....
T Consensus 64 -~~~~Vdadnv~~~l-~aLl~~~DvVIN~s~~~~~l-~Im~acleaGv~YlDTa~E 116 (480)
T 2ph5_A 64 -KLQQITPQNYLEVI-GSTLEENDFLIDVSIGISSL-ALIILCNQKGALYINAATE 116 (480)
T ss_dssp -EECCCCTTTHHHHT-GGGCCTTCEEEECCSSSCHH-HHHHHHHHHTCEEEESSCC
T ss_pred -eEEeccchhHHHHH-HHHhcCCCEEEECCccccCH-HHHHHHHHcCCCEEECCCC
Confidence 3344544321 111 23455569999998777664 4556999999999987653
No 54
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.94 E-value=0.032 Score=58.87 Aligned_cols=37 Identities=22% Similarity=0.272 Sum_probs=29.2
Q ss_pred HHHHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 500 QKKLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 500 q~~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
..++++++|+|.|+ |+||.++++.|+..|. ++++++.
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~------~V~~~~R 53 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGH------EPVAMVR 53 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCC------eEEEEEC
Confidence 45788999999997 9999999999999997 7888874
No 55
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=94.90 E-value=0.046 Score=61.05 Aligned_cols=84 Identities=10% Similarity=0.146 Sum_probs=57.3
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEE
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNT 582 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i 582 (1093)
+.+++++|+|+||.|..++..|+..|+ .+|+|++.+ .-...|++.+++.+....+ ..+
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~-----~~v~v~nRt----------------~~~~~~a~~la~~~~~~~~-~~v 203 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGI-----KEIKLFNRK----------------DDFFEKAVAFAKRVNENTD-CVV 203 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-----SEEEEEECS----------------STHHHHHHHHHHHHHHHSS-CEE
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCC-----CEEEEEECC----------------CchHHHHHHHHHHhhhccC-cce
Confidence 567899999999999999999999999 899998522 0013467777877776543 344
Q ss_pred EEEecccCccccccchhhhhccCCEEEEccC
Q 001356 583 EALQIRANPETENVFNDTFWENLNVVVNALD 613 (1093)
Q Consensus 583 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~alD 613 (1093)
..+.- .+ .+. + .+.+.++|+||+|+-
T Consensus 204 ~~~~~--~~-l~~-~-~~~l~~~DiIINaTp 229 (312)
T 3t4e_A 204 TVTDL--AD-QHA-F-TEALASADILTNGTK 229 (312)
T ss_dssp EEEET--TC-HHH-H-HHHHHHCSEEEECSS
T ss_pred EEech--Hh-hhh-h-HhhccCceEEEECCc
Confidence 44321 11 000 0 234578999999973
No 56
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=94.90 E-value=0.043 Score=60.12 Aligned_cols=72 Identities=19% Similarity=0.223 Sum_probs=52.4
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeec
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTT 185 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~ 185 (1093)
++.++|+|+|+||.|..++..|...|+++|+|++.+ ..|++.+++.+.. ..+.+...
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~-------------------~~~a~~la~~~~~----~~~~~~~~ 174 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD-------------------MAKALALRNELDH----SRLRISRY 174 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHCC----TTEEEECS
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC-------------------HHHHHHHHHHhcc----CCeeEeeH
Confidence 568899999999999999999999999999998752 2377777766644 12333221
Q ss_pred -ccchhhhcCCceEEEecC
Q 001356 186 -ELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 186 -~l~~~~l~~~dvVV~~~~ 203 (1093)
++.. .++|+||.|+.
T Consensus 175 ~~l~~---~~~DivInaTp 190 (272)
T 3pwz_A 175 EALEG---QSFDIVVNATS 190 (272)
T ss_dssp GGGTT---CCCSEEEECSS
T ss_pred HHhcc---cCCCEEEECCC
Confidence 1211 67899998873
No 57
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.83 E-value=0.041 Score=64.79 Aligned_cols=91 Identities=14% Similarity=0.108 Sum_probs=66.6
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEE
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNT 582 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i 582 (1093)
+++++|+|||.|.+|...++.|...|. +++++|.+.-+ .+.+ +.. .. .|
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga------~V~vi~~~~~~---------------------~~~~-l~~-~~--~i 58 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGA------RLTVNALTFIP---------------------QFTV-WAN-EG--ML 58 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTB------EEEEEESSCCH---------------------HHHH-HHT-TT--SC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcC------EEEEEcCCCCH---------------------HHHH-HHh-cC--CE
Confidence 567899999999999999999999997 89999964211 0111 111 12 23
Q ss_pred EEEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccce
Q 001356 583 EALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPL 632 (1093)
Q Consensus 583 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pl 632 (1093)
+.+...+ .+..+.++|+||.|+|+......+-..|...++|+
T Consensus 59 ~~~~~~~--------~~~~l~~~~lVi~at~~~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 59 TLVEGPF--------DETLLDSCWLAIAATDDDTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp EEEESSC--------CGGGGTTCSEEEECCSCHHHHHHHHHHHHHTTCEE
T ss_pred EEEECCC--------CccccCCccEEEEcCCCHHHHHHHHHHHHHcCCEE
Confidence 3443332 23446789999999999988888889999999996
No 58
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=94.78 E-value=0.044 Score=59.95 Aligned_cols=73 Identities=22% Similarity=0.303 Sum_probs=57.1
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEE
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNT 582 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i 582 (1093)
+++++++|+|+||.+..++-.|+..|+ .+|+|++.+ ..|++.+++.+....|...+
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~-----~~i~i~nRt-------------------~~ra~~la~~~~~~~~~~~~ 178 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGI-----ASITLCDPS-------------------TARMGAVCELLGNGFPGLTV 178 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-----SEEEEECSC-------------------HHHHHHHHHHHHHHCTTCEE
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCC-----CeEEEeCCC-------------------HHHHHHHHHHHhccCCccee
Confidence 467899999999999999999999999 899998521 34788889988888887654
Q ss_pred EEEecccCccccccchhhhhccCCEEEEcc
Q 001356 583 EALQIRANPETENVFNDTFWENLNVVVNAL 612 (1093)
Q Consensus 583 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~al 612 (1093)
.... .-++++|+||||+
T Consensus 179 ~~~~-------------~~~~~~dliiNaT 195 (269)
T 3tum_A 179 STQF-------------SGLEDFDLVANAS 195 (269)
T ss_dssp ESCC-------------SCSTTCSEEEECS
T ss_pred hhhh-------------hhhhcccccccCC
Confidence 3211 1135789999997
No 59
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=94.61 E-value=0.048 Score=62.17 Aligned_cols=94 Identities=14% Similarity=0.202 Sum_probs=61.4
Q ss_pred hcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEE
Q 001356 504 EEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTE 583 (1093)
Q Consensus 504 ~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~ 583 (1093)
+++||+|+|||.+|..+++.|+.. ..++++|.+. .+ +.+..+.+.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~-------~~v~~~~~~~-------------------~~-------~~~~~~~~~-- 59 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNN-------------------EN-------LEKVKEFAT-- 59 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCH-------------------HH-------HHHHTTTSE--
T ss_pred CccEEEEECCCHHHHHHHHHHhcC-------CCeEEEEcCH-------------------HH-------HHHHhccCC--
Confidence 456899999999999999998642 4777776321 11 122223222
Q ss_pred EEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceEecc
Q 001356 584 ALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLESG 636 (1093)
Q Consensus 584 ~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~sg 636 (1093)
.+.-++.+ .+.+ .++++++|+||+|+...- -..+.+.|.+.++.+++..
T Consensus 60 ~~~~d~~d-~~~l--~~~~~~~DvVi~~~p~~~-~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 60 PLKVDASN-FDKL--VEVMKEFELVIGALPGFL-GFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp EEECCTTC-HHHH--HHHHTTCSEEEECCCGGG-HHHHHHHHHHHTCEEEECC
T ss_pred cEEEecCC-HHHH--HHHHhCCCEEEEecCCcc-cchHHHHHHhcCcceEeee
Confidence 22223322 1222 356789999999997653 3567889999999999843
No 60
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=94.60 E-value=0.022 Score=64.90 Aligned_cols=90 Identities=14% Similarity=0.171 Sum_probs=57.6
Q ss_pred hcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEee-c
Q 001356 107 FASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALT-T 185 (1093)
Q Consensus 107 ~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~-~ 185 (1093)
++.||+|+|+|.+|..+++.|... ..+++.|.+ .. ++..+.+.+.....+ .
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~-------------------~~-------~~~~~~~~~~~~~~d~~ 66 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN-------------------NE-------NLEKVKEFATPLKVDAS 66 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC-------------------HH-------HHHHHTTTSEEEECCTT
T ss_pred CccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcC-------------------HH-------HHHHHhccCCcEEEecC
Confidence 456799999999999999998643 467766531 11 223333333221111 1
Q ss_pred cc--chhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEee
Q 001356 186 EL--TKEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKS 227 (1093)
Q Consensus 186 ~l--~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~ 227 (1093)
+. -.+.++++|+||.|..+. .-..+.+.|-+.+ +.++..
T Consensus 67 d~~~l~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g--~~yvD~ 107 (365)
T 3abi_A 67 NFDKLVEVMKEFELVIGALPGF-LGFKSIKAAIKSK--VDMVDV 107 (365)
T ss_dssp CHHHHHHHHTTCSEEEECCCGG-GHHHHHHHHHHHT--CEEEEC
T ss_pred CHHHHHHHHhCCCEEEEecCCc-ccchHHHHHHhcC--cceEee
Confidence 11 124688999999988644 3457889999999 777764
No 61
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=94.58 E-value=0.057 Score=59.43 Aligned_cols=73 Identities=15% Similarity=0.214 Sum_probs=53.9
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeec
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTT 185 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~ 185 (1093)
+..++|+|+|+||.|..++..|...|+.+|++++.+ ..|++.+++.+.... .+.+..
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~-------------------~~~a~~la~~~~~~~---~~~~~~- 180 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRT-------------------FAKAEQLAELVAAYG---EVKAQA- 180 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS-------------------HHHHHHHHHHHGGGS---CEEEEE-
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC-------------------HHHHHHHHHHhhccC---CeeEee-
Confidence 578899999999999999999999999999998752 237777777776542 233322
Q ss_pred ccchhhhcCCceEEEecC
Q 001356 186 ELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 186 ~l~~~~l~~~dvVV~~~~ 203 (1093)
+. +...++|+||.|+.
T Consensus 181 -~~-~l~~~aDiIInaTp 196 (281)
T 3o8q_A 181 -FE-QLKQSYDVIINSTS 196 (281)
T ss_dssp -GG-GCCSCEEEEEECSC
T ss_pred -HH-HhcCCCCEEEEcCc
Confidence 11 12267899998874
No 62
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.56 E-value=0.15 Score=49.59 Aligned_cols=85 Identities=16% Similarity=0.241 Sum_probs=57.1
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeeccc
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTEL 187 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l 187 (1093)
+.+|+|+|+|.+|..+++.|...|. .++++|.+.- ++ +.+++. .+.+ ...+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~-------------------~~----~~~~~~--g~~~--i~gd~ 58 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRT-------------------RV----DELRER--GVRA--VLGNA 58 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHH-------------------HH----HHHHHT--TCEE--EESCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHH-------------------HH----HHHHHc--CCCE--EECCC
Confidence 4589999999999999999999997 7888886321 22 233332 3332 33332
Q ss_pred -chh-----hhcCCceEEEecCCHHHHHHHHHHHHhcCC
Q 001356 188 -TKE-----KLSDFQAVVFTDISLEKAVEFDDYCHNHQP 220 (1093)
Q Consensus 188 -~~~-----~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~ 220 (1093)
+++ -+.++|+||.+..+......+-..+++.++
T Consensus 59 ~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~~~ 97 (140)
T 3fwz_A 59 ANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNP 97 (140)
T ss_dssp TSHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHHCS
T ss_pred CCHHHHHhcCcccCCEEEEECCChHHHHHHHHHHHHHCC
Confidence 222 356789999998876666556667777653
No 63
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=94.54 E-value=0.061 Score=62.30 Aligned_cols=103 Identities=19% Similarity=0.252 Sum_probs=68.5
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEEE
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEAL 585 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~~ 585 (1093)
++|+|+|+|++|..+++.|+..|-. ..+++++|.+ ..|++.+++.+....+ .++..+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~---~~~V~v~~r~-------------------~~~~~~la~~l~~~~~-~~~~~~ 58 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREV---FSHITLASRT-------------------LSKCQEIAQSIKAKGY-GEIDIT 58 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTT---CCEEEEEESC-------------------HHHHHHHHHHHHHTTC-CCCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC---ceEEEEEECC-------------------HHHHHHHHHHhhhhcC-CceEEE
Confidence 4899999999999999999988720 0277887632 2466666666654332 234444
Q ss_pred ecccCccccccchhhhhcc--CCEEEEccCCHHHHHHHhhcccccccceEec
Q 001356 586 QIRANPETENVFNDTFWEN--LNVVVNALDNVNARLYIDQRCLYFQKPLLES 635 (1093)
Q Consensus 586 ~~~v~~~~~~~~~~~f~~~--~DvVi~alDn~~aR~~i~~~c~~~~~pli~s 635 (1093)
..++... +.+ .+++++ .|+||+|+.... ..-+...|...++.+++.
T Consensus 59 ~~D~~d~-~~l--~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~vvD~ 106 (405)
T 4ina_A 59 TVDADSI-EEL--VALINEVKPQIVLNIALPYQ-DLTIMEACLRTGVPYLDT 106 (405)
T ss_dssp ECCTTCH-HHH--HHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHTCCEEES
T ss_pred EecCCCH-HHH--HHHHHhhCCCEEEECCCccc-ChHHHHHHHHhCCCEEEe
Confidence 4444421 111 244555 899999987544 356667899999999974
No 64
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.52 E-value=0.095 Score=53.19 Aligned_cols=87 Identities=10% Similarity=0.004 Sum_probs=57.9
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHh-CCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEee
Q 001356 106 LFASNILISGMQGLGAEIAKNLILA-GVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALT 184 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvla-GVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~ 184 (1093)
+.+.+|+|+|+|.+|..+++.|... |. .++++|.+. .|++ .+++.. +.+. .
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~-------------------~~~~----~~~~~g--~~~~--~ 88 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIRE-------------------EAAQ----QHRSEG--RNVI--S 88 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCH-------------------HHHH----HHHHTT--CCEE--E
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCH-------------------HHHH----HHHHCC--CCEE--E
Confidence 4567999999999999999999998 87 688888632 1222 233332 2221 1
Q ss_pred ccc-ch----hh--hcCCceEEEecCCHHHHHHHHHHHHhcCC
Q 001356 185 TEL-TK----EK--LSDFQAVVFTDISLEKAVEFDDYCHNHQP 220 (1093)
Q Consensus 185 ~~l-~~----~~--l~~~dvVV~~~~~~~~~~~ln~~c~~~~~ 220 (1093)
.+. ++ +. +.++|+||.+..+......+-..++..++
T Consensus 89 gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~ 131 (183)
T 3c85_A 89 GDATDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRNY 131 (183)
T ss_dssp CCTTCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTTC
T ss_pred cCCCCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHCC
Confidence 111 11 22 56789999988876666666667777763
No 65
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.38 E-value=0.047 Score=53.91 Aligned_cols=94 Identities=11% Similarity=0.127 Sum_probs=60.5
Q ss_pred hcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEE
Q 001356 504 EEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTE 583 (1093)
Q Consensus 504 ~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~ 583 (1093)
.+.+|+|+|+|.+|..+++.|...|. .++++|.|.- .+++.+++. ...++ .
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~------~V~vid~~~~------------------~~~~~~~~~---~~~~~--~ 52 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ------NVTVISNLPE------------------DDIKQLEQR---LGDNA--D 52 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC------CEEEEECCCH------------------HHHHHHHHH---HCTTC--E
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC------CEEEEECCCh------------------HHHHHHHHh---hcCCC--e
Confidence 35689999999999999999999997 8999985411 011111111 11223 3
Q ss_pred EEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhccccc
Q 001356 584 ALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYF 628 (1093)
Q Consensus 584 ~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~ 628 (1093)
.+...... ...+...-++++|+||.|+++...-..+...+...
T Consensus 53 ~i~gd~~~--~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 53 VIPGDSND--SSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDM 95 (153)
T ss_dssp EEESCTTS--HHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHH
T ss_pred EEEcCCCC--HHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHH
Confidence 34443332 12232334678999999999988777776666554
No 66
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.37 E-value=0.041 Score=53.79 Aligned_cols=71 Identities=18% Similarity=0.222 Sum_probs=49.8
Q ss_pred hcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecc
Q 001356 107 FASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTE 186 (1093)
Q Consensus 107 ~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~ 186 (1093)
...+|+|+|+|++|..+++.|...|+. ++++|.+. .|++..++.+. +.+.... +
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~~-------------------~~~~~~a~~~~-----~~~~~~~-~ 73 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRNI-------------------DHVRAFAEKYE-----YEYVLIN-D 73 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESCH-------------------HHHHHHHHHHT-----CEEEECS-C
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCH-------------------HHHHHHHHHhC-----CceEeec-C
Confidence 378999999999999999999999988 99988521 24444444432 2322211 1
Q ss_pred cchhhhcCCceEEEecCC
Q 001356 187 LTKEKLSDFQAVVFTDIS 204 (1093)
Q Consensus 187 l~~~~l~~~dvVV~~~~~ 204 (1093)
..+.+.++|+||.|+..
T Consensus 74 -~~~~~~~~Divi~at~~ 90 (144)
T 3oj0_A 74 -IDSLIKNNDVIITATSS 90 (144)
T ss_dssp -HHHHHHTCSEEEECSCC
T ss_pred -HHHHhcCCCEEEEeCCC
Confidence 23467789999998754
No 67
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.35 E-value=0.038 Score=61.28 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=32.8
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeC
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
+..++|+|+|+||+|..++..|...|+.+|+++|.
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR 173 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANR 173 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECS
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 56789999999999999999999999999999875
No 68
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.31 E-value=0.12 Score=57.45 Aligned_cols=35 Identities=23% Similarity=0.207 Sum_probs=30.6
Q ss_pred hcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 107 FASNILISGMQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 107 ~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
...+|.|||+|.+|..+|++|+..|...++++|.+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 34689999999999999999999998789999864
No 69
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.29 E-value=0.096 Score=58.80 Aligned_cols=77 Identities=14% Similarity=0.114 Sum_probs=53.8
Q ss_pred HhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhC----CCcEE
Q 001356 105 RLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELN----NAVAI 180 (1093)
Q Consensus 105 kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLN----p~V~V 180 (1093)
+|+..+|.|+|+|.+|..+|..|+..|.++++|+|-+. .|++..+..|++.+ ..++|
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~v 64 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE-------------------GTPQGKGLDIAESSPVDGFDAKF 64 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHHHHHHHTCCCCE
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc-------------------hhHHHHHHHHhchhhhcCCCCEE
Confidence 35677999999999999999999999988899998532 23443344455443 24556
Q ss_pred EEeecccchhhhcCCceEEEecC
Q 001356 181 SALTTELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 181 ~~~~~~l~~~~l~~~dvVV~~~~ 203 (1093)
..... .+-+++.|+||.+..
T Consensus 65 ~~t~d---~~a~~~aDiVIiaag 84 (324)
T 3gvi_A 65 TGAND---YAAIEGADVVIVTAG 84 (324)
T ss_dssp EEESS---GGGGTTCSEEEECCS
T ss_pred EEeCC---HHHHCCCCEEEEccC
Confidence 54332 256889999998853
No 70
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=94.26 E-value=0.13 Score=59.52 Aligned_cols=95 Identities=15% Similarity=0.276 Sum_probs=65.8
Q ss_pred CeEEEEcCChhHHHHHHHHHHhC-C-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecc
Q 001356 109 SNILISGMQGLGAEIAKNLILAG-V-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTE 186 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaG-V-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~ 186 (1093)
.+|+|+|+|++|.++++.|+..| + ..+++.|.+ ..|++.+++.+....+ ..+.....+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~-------------------~~~~~~la~~l~~~~~-~~~~~~~~D 61 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRT-------------------LSKCQEIAQSIKAKGY-GEIDITTVD 61 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESC-------------------HHHHHHHHHHHHHTTC-CCCEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECC-------------------HHHHHHHHHHhhhhcC-CceEEEEec
Confidence 48999999999999999999988 4 689888752 2367777777665431 123333333
Q ss_pred cc-----hhhhcC--CceEEEecCCHHHHHHHHHHHHhcCCCcceEe
Q 001356 187 LT-----KEKLSD--FQAVVFTDISLEKAVEFDDYCHNHQPPIAFIK 226 (1093)
Q Consensus 187 l~-----~~~l~~--~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~ 226 (1093)
++ .+.+++ .|+||.+..+.. ...+.+.|.+.+ +.++.
T Consensus 62 ~~d~~~l~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g--~~vvD 105 (405)
T 4ina_A 62 ADSIEELVALINEVKPQIVLNIALPYQ-DLTIMEACLRTG--VPYLD 105 (405)
T ss_dssp TTCHHHHHHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHT--CCEEE
T ss_pred CCCHHHHHHHHHhhCCCEEEECCCccc-ChHHHHHHHHhC--CCEEE
Confidence 32 134555 899998876443 356778899999 77775
No 71
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.24 E-value=0.062 Score=56.34 Aligned_cols=88 Identities=15% Similarity=0.137 Sum_probs=58.0
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEEE
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEAL 585 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~~ 585 (1093)
++|+|+|+|.+|..+++.|...|. .++++|.|.= +++ .+.+. .+. ..+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~------~v~vid~~~~-------------------~~~----~l~~~-~~~--~~i 48 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKY------GVVIINKDRE-------------------LCE----EFAKK-LKA--TII 48 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTC------CEEEEESCHH-------------------HHH----HHHHH-SSS--EEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEECCHH-------------------HHH----HHHHH-cCC--eEE
Confidence 479999999999999999999997 8999984321 111 11111 122 334
Q ss_pred ecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccc
Q 001356 586 QIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLY 627 (1093)
Q Consensus 586 ~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~ 627 (1093)
...... ...+...-.+++|+||.|+++......+...+..
T Consensus 49 ~gd~~~--~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~ 88 (218)
T 3l4b_C 49 HGDGSH--KEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMK 88 (218)
T ss_dssp ESCTTS--HHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHH
T ss_pred EcCCCC--HHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHH
Confidence 443332 1223233467899999999998877777666654
No 72
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.99 E-value=0.14 Score=53.71 Aligned_cols=93 Identities=11% Similarity=0.085 Sum_probs=61.1
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecccc-
Q 001356 110 NILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTELT- 188 (1093)
Q Consensus 110 ~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l~- 188 (1093)
+|+|+|+|.+|..+++.|...|. .++++|.+. .+++ .+.+. ..+. ++..+.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~-------------------~~~~----~l~~~-~~~~--~i~gd~~~ 54 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDR-------------------ELCE----EFAKK-LKAT--IIHGDGSH 54 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHHH----HHHHH-SSSE--EEESCTTS
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH-------------------HHHH----HHHHH-cCCe--EEEcCCCC
Confidence 79999999999999999999997 788888532 1222 22221 1232 2333222
Q ss_pred -----hhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEeeeec
Q 001356 189 -----KEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKSEVR 230 (1093)
Q Consensus 189 -----~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~~~~ 230 (1093)
...+.++|+||++..+......+...+++..+ .+-|.+.+.
T Consensus 55 ~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~-~~~iia~~~ 100 (218)
T 3l4b_C 55 KEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFG-VKRVVSLVN 100 (218)
T ss_dssp HHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSC-CCEEEECCC
T ss_pred HHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcC-CCeEEEEEe
Confidence 22467899999999888777778888887432 444554433
No 73
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=93.96 E-value=0.049 Score=59.67 Aligned_cols=73 Identities=22% Similarity=0.291 Sum_probs=51.0
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEE
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNT 582 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i 582 (1093)
+.+++++|+|+||+|..++..|+..|+ .+|+|++.+ ..|++.+++.+.. ..+
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~-----~~v~i~~R~-------------------~~~a~~la~~~~~----~~~ 169 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGP-----SELVIANRD-------------------MAKALALRNELDH----SRL 169 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCC-----SEEEEECSC-------------------HHHHHHHHHHHCC----TTE
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCC-----CEEEEEeCC-------------------HHHHHHHHHHhcc----CCe
Confidence 567899999999999999999999999 899998622 2366666665543 123
Q ss_pred EEEecccCccccccchhhhhccCCEEEEccC
Q 001356 583 EALQIRANPETENVFNDTFWENLNVVVNALD 613 (1093)
Q Consensus 583 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~alD 613 (1093)
.+.. + +.+ . . .++|+||+|+-
T Consensus 170 ~~~~--~----~~l-~-~--~~~DivInaTp 190 (272)
T 3pwz_A 170 RISR--Y----EAL-E-G--QSFDIVVNATS 190 (272)
T ss_dssp EEEC--S----GGG-T-T--CCCSEEEECSS
T ss_pred eEee--H----HHh-c-c--cCCCEEEECCC
Confidence 3321 1 111 1 1 67999999974
No 74
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.89 E-value=0.3 Score=51.31 Aligned_cols=102 Identities=16% Similarity=0.125 Sum_probs=60.3
Q ss_pred HHHHhhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEE
Q 001356 102 TMRRLFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAI 180 (1093)
Q Consensus 102 ~q~kL~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V 180 (1093)
.+.+|++.+|+|.|+ |++|.++++.|+..|. +|++++.+.- +.+ .+.+. .+ .
T Consensus 15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~-------------------~~~----~~~~~--~~-~ 67 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEE-------------------QGP----ELRER--GA-S 67 (236)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGG-------------------GHH----HHHHT--TC-S
T ss_pred cccCcCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChH-------------------HHH----HHHhC--CC-c
Confidence 355788899999997 8899999999999996 7877764321 111 12221 22 0
Q ss_pred EEeecccc---hhhhcCCceEEEecC-------------CHHHHHHHHHHHHhcCCCcceEeeeecc
Q 001356 181 SALTTELT---KEKLSDFQAVVFTDI-------------SLEKAVEFDDYCHNHQPPIAFIKSEVRG 231 (1093)
Q Consensus 181 ~~~~~~l~---~~~l~~~dvVV~~~~-------------~~~~~~~ln~~c~~~~~~ip~I~~~~~G 231 (1093)
+.+..+++ .+.+.+.|+||.+.. +......+-+.|++.+. ..+|..++.|
T Consensus 68 ~~~~~Dl~~~~~~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~iv~~SS~~ 133 (236)
T 3e8x_A 68 DIVVANLEEDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGI-KRFIMVSSVG 133 (236)
T ss_dssp EEEECCTTSCCGGGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTC-CEEEEECCTT
T ss_pred eEEEcccHHHHHHHHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCC-CEEEEEecCC
Confidence 33344443 245678899997653 22234566778887772 2466656544
No 75
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=93.82 E-value=0.055 Score=61.84 Aligned_cols=91 Identities=13% Similarity=0.053 Sum_probs=58.4
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEee-
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALT- 184 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~- 184 (1093)
=++++|+|+|+|++|..++++|+.. ..+++.|.+. .|++.+++ ........
T Consensus 14 ~~~~~v~IiGaG~iG~~ia~~L~~~--~~V~V~~R~~-------------------~~a~~la~-------~~~~~~~d~ 65 (365)
T 2z2v_A 14 GRHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNN-------------------ENLEKVKE-------FATPLKVDA 65 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCH-------------------HHHHHHTT-------TSEEEECCT
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHcC--CeEEEEECCH-------------------HHHHHHHh-------hCCeEEEec
Confidence 3678999999999999999999988 6788887521 23333221 12211111
Q ss_pred ccc--chhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEee
Q 001356 185 TEL--TKEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKS 227 (1093)
Q Consensus 185 ~~l--~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~ 227 (1093)
.+. -.+.++++|+||.|. +...-..+.+.|-+.+ +.++..
T Consensus 66 ~~~~~l~~ll~~~DvVIn~~-P~~~~~~v~~a~l~~G--~~~vD~ 107 (365)
T 2z2v_A 66 SNFDKLVEVMKEFELVIGAL-PGFLGFKSIKAAIKSK--VDMVDV 107 (365)
T ss_dssp TCHHHHHHHHTTCSCEEECC-CHHHHHHHHHHHHHTT--CCEEEC
T ss_pred CCHHHHHHHHhCCCEEEECC-ChhhhHHHHHHHHHhC--CeEEEc
Confidence 111 125678899999985 4333445778899988 677663
No 76
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.68 E-value=0.35 Score=53.65 Aligned_cols=73 Identities=25% Similarity=0.271 Sum_probs=50.8
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhC----CCcEEEEe
Q 001356 109 SNILISGMQGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELN----NAVAISAL 183 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLN----p~V~V~~~ 183 (1093)
.+|.|||+|.+|+.++..|+..|+ ..++++|.+. .|++..+..+...+ ..+.+.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~-- 60 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE-------------------AKVKADQIDFQDAMANLEAHGNIV-- 60 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH-------------------HHHHHHHHHHHHHGGGSSSCCEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH-------------------HHHHHHHHHHHhhhhhcCCCeEEE--
Confidence 479999999999999999999996 7899988531 24444444444332 223443
Q ss_pred ecccchhhhcCCceEEEecCC
Q 001356 184 TTELTKEKLSDFQAVVFTDIS 204 (1093)
Q Consensus 184 ~~~l~~~~l~~~dvVV~~~~~ 204 (1093)
..+. +.++++|+||.+...
T Consensus 61 ~~d~--~~~~~aDvViiav~~ 79 (309)
T 1hyh_A 61 INDW--AALADADVVISTLGN 79 (309)
T ss_dssp ESCG--GGGTTCSEEEECCSC
T ss_pred eCCH--HHhCCCCEEEEecCC
Confidence 2333 457899999998864
No 77
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=93.60 E-value=0.071 Score=58.65 Aligned_cols=74 Identities=23% Similarity=0.304 Sum_probs=52.6
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEE
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNT 582 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i 582 (1093)
+.+++++|+|+||+|..++..|+..|+ .+|+|++.+ ..|++.+++.+.... .+
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~-----~~v~v~~R~-------------------~~~a~~la~~~~~~~---~~ 176 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQP-----ASITVTNRT-------------------FAKAEQLAELVAAYG---EV 176 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCC-----SEEEEEESS-------------------HHHHHHHHHHHGGGS---CE
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCC-----CeEEEEECC-------------------HHHHHHHHHHhhccC---Ce
Confidence 568899999999999999999999999 899998632 246666666665432 23
Q ss_pred EEEecccCccccccchhhhhccCCEEEEccCC
Q 001356 583 EALQIRANPETENVFNDTFWENLNVVVNALDN 614 (1093)
Q Consensus 583 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn 614 (1093)
.+.. + + +...++|+||+|+-.
T Consensus 177 ~~~~--~----~-----~l~~~aDiIInaTp~ 197 (281)
T 3o8q_A 177 KAQA--F----E-----QLKQSYDVIINSTSA 197 (281)
T ss_dssp EEEE--G----G-----GCCSCEEEEEECSCC
T ss_pred eEee--H----H-----HhcCCCCEEEEcCcC
Confidence 3321 1 1 112678999999853
No 78
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=93.60 E-value=0.33 Score=54.01 Aligned_cols=71 Identities=21% Similarity=0.260 Sum_probs=51.3
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHH----hCCCcEEEEeec
Q 001356 110 NILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQE----LNNAVAISALTT 185 (1093)
Q Consensus 110 ~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~e----LNp~V~V~~~~~ 185 (1093)
+|.|+|+|.+|..++..|+..|+++|.|+|-+ ..|++..+..|.+ ++..+++....+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~-------------------~~~~~g~~~dl~~~~~~~~~~~~i~~t~d 61 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIART-------------------PGKPQGEALDLAHAAAELGVDIRISGSNS 61 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-------------------TTHHHHHHHHHHHHHHHHTCCCCEEEESC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCC-------------------hhhHHHHHHHHHHhhhhcCCCeEEEECCC
Confidence 68999999999999999999999669999853 1233333344443 455667766432
Q ss_pred ccchhhhcCCceEEEec
Q 001356 186 ELTKEKLSDFQAVVFTD 202 (1093)
Q Consensus 186 ~l~~~~l~~~dvVV~~~ 202 (1093)
. +-+++.|+||.+.
T Consensus 62 -~--~a~~~aD~Vi~~a 75 (308)
T 2d4a_B 62 -Y--EDMRGSDIVLVTA 75 (308)
T ss_dssp -G--GGGTTCSEEEECC
T ss_pred -H--HHhCCCCEEEEeC
Confidence 2 4588999999984
No 79
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.48 E-value=0.039 Score=53.99 Aligned_cols=37 Identities=22% Similarity=0.341 Sum_probs=31.4
Q ss_pred HHHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 500 QKKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 500 q~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
..+...++|+|||+|++|..+++.|...|+ . ++++|.
T Consensus 16 ~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-----~-v~v~~r 52 (144)
T 3oj0_A 16 VRKNGGNKILLVGNGMLASEIAPYFSYPQY-----K-VTVAGR 52 (144)
T ss_dssp HHHHCCCEEEEECCSHHHHHHGGGCCTTTC-----E-EEEEES
T ss_pred HHhccCCEEEEECCCHHHHHHHHHHHhCCC-----E-EEEEcC
Confidence 344458999999999999999999999888 5 888874
No 80
>3onh_A Ubiquitin-activating enzyme E1-like; ligase, SUMO conjugation, UBC9; 1.60A {Saccharomyces cerevisiae} PDB: 3ong_A
Probab=93.45 E-value=0.092 Score=50.17 Aligned_cols=45 Identities=18% Similarity=0.322 Sum_probs=35.7
Q ss_pred CCcHHHHHHHHHHc-CCc-eeeee--cCCceeeccCCcchhhcccCcHHHHH
Q 001356 1007 NPTLRQLLQWLQDK-GLN-AYSIS--YGSCLLFNSMFPRHKERMDKKVVDLV 1054 (1093)
Q Consensus 1007 ~~TL~~li~~~~~~-~l~-~~~i~--~g~~~LY~~~~~~~~~~l~~~l~~l~ 1054 (1093)
.+||++|++.++++ |+. -.+|+ .+.++||+..+ .++|+++|.+|.
T Consensus 19 ~~TL~dLV~~l~~~~gy~~eiSV~~~~~~rLLyD~Df---DDnl~k~L~dLg 67 (127)
T 3onh_A 19 KMKLSDFVVLIREKYSYPQDISLLDASNQRLLFDYDF---EDLNDRTLSEIN 67 (127)
T ss_dssp HCBHHHHHHHHHHHHTCCSSEEEEETTTTEEEEETTB---CTTTTSBTTTTT
T ss_pred ccCHHHHHHHHHHhcCCCCcEEEEecCCCCeEeCCCc---cccccCcHHHcC
Confidence 58999999999888 764 34555 25689999654 489999999995
No 81
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=93.33 E-value=0.41 Score=53.34 Aligned_cols=110 Identities=12% Similarity=0.155 Sum_probs=67.9
Q ss_pred HHhhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCC---cE
Q 001356 104 RRLFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNA---VA 179 (1093)
Q Consensus 104 ~kL~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~---V~ 179 (1093)
..+...+|||.|+ |.+|..+++.|...|. +|+.++...-. .......+..+.+. -.
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~ 80 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTG-------------------HQYNLDEVKTLVSTEQWSR 80 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC-------------------CHHHHHHHHHTSCHHHHTT
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCC-------------------chhhhhhhhhccccccCCc
Confidence 3567889999996 6799999999999995 67776642210 01112233332210 23
Q ss_pred EEEeecccch-----hhhcCCceEEEecCC-----------------HHHHHHHHHHHHhcCCCcceEeeeecceeE
Q 001356 180 ISALTTELTK-----EKLSDFQAVVFTDIS-----------------LEKAVEFDDYCHNHQPPIAFIKSEVRGLFG 234 (1093)
Q Consensus 180 V~~~~~~l~~-----~~l~~~dvVV~~~~~-----------------~~~~~~ln~~c~~~~~~ip~I~~~~~G~~G 234 (1093)
++.+..++.+ +.++++|+||.+... ......+-+.|++.+. ..||..++.+.+|
T Consensus 81 ~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~v~~SS~~vyg 156 (351)
T 3ruf_A 81 FCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV-QSFTYAASSSTYG 156 (351)
T ss_dssp EEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-SEEEEEEEGGGGT
T ss_pred eEEEEccCCCHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC-CEEEEEecHHhcC
Confidence 4555555532 356789999976531 1112346678888872 2788888777765
No 82
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.32 E-value=0.16 Score=56.86 Aligned_cols=75 Identities=15% Similarity=0.198 Sum_probs=53.4
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhC----CCcEEE
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELN----NAVAIS 181 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLN----p~V~V~ 181 (1093)
|...+|.|+|+|.+|+.+|..|+..|+++++|+|-+. .|++..+..|++.. ..++|.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~-------------------~~~~g~a~dL~~~~~~~~~~~~v~ 63 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ-------------------GMPNGKALDLLQTCPIEGVDFKVR 63 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh-------------------HHHHHHHHHHHhhhhhcCCCcEEE
Confidence 4467999999999999999999999988899998532 23444444454432 345665
Q ss_pred EeecccchhhhcCCceEEEec
Q 001356 182 ALTTELTKEKLSDFQAVVFTD 202 (1093)
Q Consensus 182 ~~~~~l~~~~l~~~dvVV~~~ 202 (1093)
.... .+-+++.|+||.+.
T Consensus 64 ~t~d---~~a~~~aDvVIi~a 81 (321)
T 3p7m_A 64 GTND---YKDLENSDVVIVTA 81 (321)
T ss_dssp EESC---GGGGTTCSEEEECC
T ss_pred EcCC---HHHHCCCCEEEEcC
Confidence 4322 35788999999885
No 83
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=93.24 E-value=0.11 Score=53.87 Aligned_cols=94 Identities=16% Similarity=0.103 Sum_probs=57.5
Q ss_pred CcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEE
Q 001356 506 AKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEA 584 (1093)
Q Consensus 506 ~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~ 584 (1093)
+||+|.|+ |+||.++++.|+..|. ++++++.+.- +.. .+ ..+. ++.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~------~V~~~~R~~~-------------------~~~----~~--~~~~--~~~ 47 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGH------EVLAVVRDPQ-------------------KAA----DR--LGAT--VAT 47 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCHH-------------------HHH----HH--TCTT--SEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCC------EEEEEEeccc-------------------ccc----cc--cCCC--ceE
Confidence 37999997 9999999999999997 7888763311 111 11 1123 344
Q ss_pred EecccCccccccchhhhhccCCEEEEccCC----------HHHHHHHhhcccccccceEeccc
Q 001356 585 LQIRANPETENVFNDTFWENLNVVVNALDN----------VNARLYIDQRCLYFQKPLLESGT 637 (1093)
Q Consensus 585 ~~~~v~~~~~~~~~~~f~~~~DvVi~alDn----------~~aR~~i~~~c~~~~~pli~sgt 637 (1093)
+..++.+... ..+.++|+||++... ...-..+-+.|...+..+|..++
T Consensus 48 ~~~D~~d~~~-----~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 48 LVKEPLVLTE-----ADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp EECCGGGCCH-----HHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred EecccccccH-----hhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 5555543222 456889999988743 33334455566665555554443
No 84
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=93.23 E-value=0.16 Score=55.65 Aligned_cols=108 Identities=14% Similarity=0.095 Sum_probs=67.2
Q ss_pred HhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHh--CCCcEEEE
Q 001356 105 RLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQEL--NNAVAISA 182 (1093)
Q Consensus 105 kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eL--Np~V~V~~ 182 (1093)
.++.++|+|+|+||.|..++..|...|+++|++++.+.-....+...+ +..- .+.+.+. ..++-|.+
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~-------~~~~----~~~~~~~~~~aDiVIna 182 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNI-------NKIN----LSHAESHLDEFDIIINT 182 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCC-------EEEC----HHHHHHTGGGCSEEEEC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhc-------cccc----HhhHHHHhcCCCEEEEC
Confidence 367899999999999999999999999999999998765444444321 1000 1123332 23444443
Q ss_pred eecc--------cchhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEe
Q 001356 183 LTTE--------LTKEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIK 226 (1093)
Q Consensus 183 ~~~~--------l~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~ 226 (1093)
.... ++.+.+..-.+|++...+.. ...+-+.+++.| +..+.
T Consensus 183 Tp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~-~T~ll~~A~~~G--~~~~~ 231 (277)
T 3don_A 183 TPAGMNGNTDSVISLNRLASHTLVSDIVYNPY-KTPILIEAEQRG--NPIYN 231 (277)
T ss_dssp CC-------CCSSCCTTCCSSCEEEESCCSSS-SCHHHHHHHHTT--CCEEC
T ss_pred ccCCCCCCCcCCCCHHHcCCCCEEEEecCCCC-CCHHHHHHHHCc--CEEeC
Confidence 3211 22344555667887765432 234677888888 65543
No 85
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=93.21 E-value=0.32 Score=53.32 Aligned_cols=90 Identities=14% Similarity=0.227 Sum_probs=62.7
Q ss_pred HHHHHHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCc--ceEEecCCccccccCCcccccccCccccchHHHHHHHHH
Q 001356 498 KLQKKLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQG--KLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAA 574 (1093)
Q Consensus 498 ~~q~~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g--~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~ 574 (1093)
.....|.+++++|.|+ ||||.++++.|+..|. + +++++|.+ ..+.+.+++.+.
T Consensus 26 ~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~-----~~~~V~~~~r~-------------------~~~~~~~~~~l~ 81 (287)
T 3rku_A 26 KAAERLAKKTVLITGASAGIGKATALEYLEASN-----GDMKLILAARR-------------------LEKLEELKKTID 81 (287)
T ss_dssp HHHHHHTTCEEEEESTTSHHHHHHHHHHHHHHT-----TCSEEEEEESC-------------------HHHHHHHHHHHH
T ss_pred cchhhcCCCEEEEecCCChHHHHHHHHHHHcCC-----CCceEEEEECC-------------------HHHHHHHHHHHH
Confidence 3456789999999985 8999999999999987 4 77777632 235566777788
Q ss_pred HhCCCCEEEEEecccCcccc--ccch--hhhhccCCEEEEc
Q 001356 575 LINPHLNTEALQIRANPETE--NVFN--DTFWENLNVVVNA 611 (1093)
Q Consensus 575 ~~np~~~i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~a 611 (1093)
..+|..++..+..++..... ..+. .+-+...|++|++
T Consensus 82 ~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnn 122 (287)
T 3rku_A 82 QEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNN 122 (287)
T ss_dssp HHCTTCEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEEC
T ss_pred hhCCCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 87888888888877764321 1110 0123457777765
No 86
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=93.05 E-value=0.27 Score=54.94 Aligned_cols=78 Identities=15% Similarity=0.256 Sum_probs=52.7
Q ss_pred HHHhhcCeEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhC----CC
Q 001356 103 MRRLFASNILISGMQGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELN----NA 177 (1093)
Q Consensus 103 q~kL~~s~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLN----p~ 177 (1093)
|.++...+|.|||+|.+|..++..|+..|. ..|.|+|-+. .|++..+..|.... ..
T Consensus 1 m~~m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~ 61 (317)
T 3d0o_A 1 MNKFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT-------------------EKVRGDVMDLKHATPYSPTT 61 (317)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH-------------------HHHHHHHHHHHHHGGGSSSC
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------hHhhhhhhhHHhhhhhcCCC
Confidence 345667899999999999999999999886 7899998531 23433333333322 34
Q ss_pred cEEEEeecccchhhhcCCceEEEecC
Q 001356 178 VAISALTTELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 178 V~V~~~~~~l~~~~l~~~dvVV~~~~ 203 (1093)
+++.. . +.+-+++.|+||.+..
T Consensus 62 ~~v~~--~--~~~a~~~aDvVvi~ag 83 (317)
T 3d0o_A 62 VRVKA--G--EYSDCHDADLVVICAG 83 (317)
T ss_dssp CEEEE--C--CGGGGTTCSEEEECCC
T ss_pred eEEEe--C--CHHHhCCCCEEEECCC
Confidence 56654 2 2456889999998864
No 87
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=93.04 E-value=0.14 Score=55.37 Aligned_cols=83 Identities=16% Similarity=0.270 Sum_probs=57.3
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
|++++++|.|+ ||||.++++.|+..|. +++++|.+ ..+.+.+++.+....+...
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~ 62 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA------NVLINGRR-------------------EENVNETIKEIRAQYPDAI 62 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESS-------------------HHHHHHHHHHHHHHCTTCE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC-------------------HHHHHHHHHHHHhhCCCce
Confidence 56778888885 8999999999999997 78887633 2345566777788888888
Q ss_pred EEEEecccCcccc--ccchhhhhccCCEEEEcc
Q 001356 582 TEALQIRANPETE--NVFNDTFWENLNVVVNAL 612 (1093)
Q Consensus 582 i~~~~~~v~~~~~--~~~~~~f~~~~DvVi~al 612 (1093)
+..+..++..... .++ +-+...|++|++.
T Consensus 63 ~~~~~~D~~~~~~~~~~~--~~~g~id~lv~nA 93 (267)
T 3t4x_A 63 LQPVVADLGTEQGCQDVI--EKYPKVDILINNL 93 (267)
T ss_dssp EEEEECCTTSHHHHHHHH--HHCCCCSEEEECC
T ss_pred EEEEecCCCCHHHHHHHH--HhcCCCCEEEECC
Confidence 8887776664221 111 1134567777653
No 88
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.02 E-value=0.21 Score=54.13 Aligned_cols=99 Identities=13% Similarity=0.125 Sum_probs=61.2
Q ss_pred hcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEE
Q 001356 504 EEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTE 583 (1093)
Q Consensus 504 ~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~ 583 (1093)
+.++|+|.|+|.||..+++.|+..|. ++++++.+. +.+ .+. ++
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~------~V~~~~r~~---~~~--------------------------~~~--~~ 44 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGH------EVTGLRRSA---QPM--------------------------PAG--VQ 44 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC------CEEEEECTT---SCC--------------------------CTT--CC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC------EEEEEeCCc---ccc--------------------------ccC--Cc
Confidence 34689999999999999999999997 788876431 110 122 33
Q ss_pred EEecccCccccccchhhhhcc-CCEEEEccC------------CHHHHHHHhhccccccc-ceEeccccCccc
Q 001356 584 ALQIRANPETENVFNDTFWEN-LNVVVNALD------------NVNARLYIDQRCLYFQK-PLLESGTLGAKC 642 (1093)
Q Consensus 584 ~~~~~v~~~~~~~~~~~f~~~-~DvVi~alD------------n~~aR~~i~~~c~~~~~-pli~sgt~G~~G 642 (1093)
.+..++.+.. . + ...++. +|+||.+.. |+.+-..+-+.|...++ .+|..++.+.+|
T Consensus 45 ~~~~Dl~d~~-~-~-~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg 114 (286)
T 3gpi_A 45 TLIADVTRPD-T-L-ASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYG 114 (286)
T ss_dssp EEECCTTCGG-G-C-TTGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCC
T ss_pred eEEccCCChH-H-H-HHhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEc
Confidence 4444454321 1 2 234455 999998752 44444555666766664 466555555444
No 89
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.02 E-value=0.2 Score=52.00 Aligned_cols=95 Identities=17% Similarity=0.271 Sum_probs=59.0
Q ss_pred CcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEE
Q 001356 506 AKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEA 584 (1093)
Q Consensus 506 ~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~ 584 (1093)
++|+|.| .|+||.++++.|+..|. ++++++.+.-....+ + .++.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~------~V~~~~R~~~~~~~~---------------------------~--~~~~ 45 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDY------QIYAGARKVEQVPQY---------------------------N--NVKA 45 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSC------EEEEEESSGGGSCCC---------------------------T--TEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCC------EEEEEECCccchhhc---------------------------C--CceE
Confidence 3799999 69999999999999987 888887543111100 2 3455
Q ss_pred EecccCccccccchhhhhccCCEEEEccC---------CHHHHHHHhhccccccc-ceEeccc
Q 001356 585 LQIRANPETENVFNDTFWENLNVVVNALD---------NVNARLYIDQRCLYFQK-PLLESGT 637 (1093)
Q Consensus 585 ~~~~v~~~~~~~~~~~f~~~~DvVi~alD---------n~~aR~~i~~~c~~~~~-pli~sgt 637 (1093)
+..++.+..+.+ .+.++++|+||++.. |..+-..+-+.|.+.++ .+|..++
T Consensus 46 ~~~D~~d~~~~~--~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 46 VHFDVDWTPEEM--AKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp EECCTTSCHHHH--HTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEecccCCHHHH--HHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 666665412222 345678999998875 44444455556655554 3444333
No 90
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=92.80 E-value=0.18 Score=55.12 Aligned_cols=67 Identities=10% Similarity=0.132 Sum_probs=48.9
Q ss_pred hcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecc
Q 001356 107 FASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTE 186 (1093)
Q Consensus 107 ~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~ 186 (1093)
..++|+|+|+||.|..++..|...|+++|+|++.+ ..||+.+++.+. ..+ ...
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt-------------------~~ka~~la~~~~-----~~~---~~~ 170 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN-------------------VKTGQYLAALYG-----YAY---INS 170 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC-------------------HHHHHHHHHHHT-----CEE---ESC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC-------------------HHHHHHHHHHcC-----Ccc---chh
Confidence 35789999999999999999999999999998752 236776666552 111 111
Q ss_pred cchhhhcCCceEEEecC
Q 001356 187 LTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 187 l~~~~l~~~dvVV~~~~ 203 (1093)
+ . +.++|+||.|+.
T Consensus 171 ~--~-~~~~DivInaTp 184 (271)
T 1npy_A 171 L--E-NQQADILVNVTS 184 (271)
T ss_dssp C--T-TCCCSEEEECSS
T ss_pred h--h-cccCCEEEECCC
Confidence 1 1 457899998874
No 91
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=92.78 E-value=0.16 Score=57.89 Aligned_cols=94 Identities=14% Similarity=0.222 Sum_probs=60.8
Q ss_pred hcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEE
Q 001356 504 EEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTE 583 (1093)
Q Consensus 504 ~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~ 583 (1093)
++++|+|+|+|++|..+++.|++. . ++++.|.+ ..|++.+++ ...
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-~------~V~V~~R~-------------------~~~a~~la~-------~~~-- 59 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-F------DVYIGDVN-------------------NENLEKVKE-------FAT-- 59 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-S------EEEEEESC-------------------HHHHHHHTT-------TSE--
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-C------eEEEEECC-------------------HHHHHHHHh-------hCC--
Confidence 578999999999999999999887 4 68887732 123332221 122
Q ss_pred EEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceEecc
Q 001356 584 ALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLESG 636 (1093)
Q Consensus 584 ~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~sg 636 (1093)
.....+.. .+.+ .+.++++|+||+|+-.... ..+...|...++.+++..
T Consensus 60 ~~~~d~~~-~~~l--~~ll~~~DvVIn~~P~~~~-~~v~~a~l~~G~~~vD~s 108 (365)
T 2z2v_A 60 PLKVDASN-FDKL--VEVMKEFELVIGALPGFLG-FKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp EEECCTTC-HHHH--HHHHTTCSCEEECCCHHHH-HHHHHHHHHTTCCEEECC
T ss_pred eEEEecCC-HHHH--HHHHhCCCEEEECCChhhh-HHHHHHHHHhCCeEEEcc
Confidence 11112211 1111 3567899999999865433 346788999999999844
No 92
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.77 E-value=0.37 Score=53.76 Aligned_cols=72 Identities=18% Similarity=0.261 Sum_probs=51.1
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCC----CcEEEE
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNN----AVAISA 182 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp----~V~V~~ 182 (1093)
..+|.|||+|.+|..++..|...|. ++|.|+|-+ ..|+++.+..|.+..+ .+++..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~-------------------~~~~~~~~~dl~~~~~~~~~~~~i~~ 66 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN-------------------ESKAIGDAMDFNHGKVFAPKPVDIWH 66 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS-------------------HHHHHHHHHHHHHHTTSSSSCCEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC-------------------cchHHHHHhhHHHHhhhcCCCeEEEc
Confidence 3689999999999999999999884 789999852 1244444444554444 455553
Q ss_pred eecccchhhhcCCceEEEec
Q 001356 183 LTTELTKEKLSDFQAVVFTD 202 (1093)
Q Consensus 183 ~~~~l~~~~l~~~dvVV~~~ 202 (1093)
. +.+-+++.|+||.+.
T Consensus 67 --~--~~~al~~aDvViia~ 82 (316)
T 1ldn_A 67 --G--DYDDCRDADLVVICA 82 (316)
T ss_dssp --C--CGGGTTTCSEEEECC
T ss_pred --C--cHHHhCCCCEEEEcC
Confidence 2 234588999999984
No 93
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=92.76 E-value=0.29 Score=49.68 Aligned_cols=34 Identities=24% Similarity=0.210 Sum_probs=29.1
Q ss_pred cCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCc
Q 001356 108 ASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGV 142 (1093)
Q Consensus 108 ~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~ 142 (1093)
..+|+|.|+ |++|.++++.|...| .++++++.+.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~~ 37 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDS 37 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCG
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCh
Confidence 368999998 889999999999999 4788887654
No 94
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.74 E-value=0.11 Score=57.19 Aligned_cols=38 Identities=18% Similarity=0.346 Sum_probs=34.2
Q ss_pred HHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCc
Q 001356 502 KLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDV 544 (1093)
Q Consensus 502 ~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~ 544 (1093)
.+.+++++|+|+||.|..++..|+..|+ .+|+|++.+.
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~-----~~v~v~~R~~ 151 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVR-----PTLTVANRTM 151 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCC-----SCCEEECSCG
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-----CEEEEEeCCH
Confidence 3678999999999999999999999999 8999997553
No 95
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.67 E-value=0.21 Score=51.98 Aligned_cols=97 Identities=16% Similarity=0.193 Sum_probs=60.6
Q ss_pred CcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEE
Q 001356 506 AKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEA 584 (1093)
Q Consensus 506 ~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~ 584 (1093)
++|+|.|+ |.||..+++.|+..|. ++++++.+.-....+ . -.++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~~~~~--------------------------~--~~~~~ 50 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGF------EVTAVVRHPEKIKIE--------------------------N--EHLKV 50 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTC------EEEEECSCGGGCCCC--------------------------C--TTEEE
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCC------EEEEEEcCcccchhc--------------------------c--CceEE
Confidence 68999995 9999999999999986 888888653222111 0 13445
Q ss_pred EecccCccccccchhhhhccCCEEEEccCC-----------HHHHHHHhhccccccc-ceEeccccC
Q 001356 585 LQIRANPETENVFNDTFWENLNVVVNALDN-----------VNARLYIDQRCLYFQK-PLLESGTLG 639 (1093)
Q Consensus 585 ~~~~v~~~~~~~~~~~f~~~~DvVi~alDn-----------~~aR~~i~~~c~~~~~-pli~sgt~G 639 (1093)
+..++.+. +.+ ...++++|+||++... ...-..+-+.|...++ .+|..++.+
T Consensus 51 ~~~Dl~d~-~~~--~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~ 114 (227)
T 3dhn_A 51 KKADVSSL-DEV--CEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG 114 (227)
T ss_dssp ECCCTTCH-HHH--HHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred EEecCCCH-HHH--HHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence 55555432 111 3456788888887643 3334455556666664 466555544
No 96
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.66 E-value=0.13 Score=57.21 Aligned_cols=34 Identities=26% Similarity=0.315 Sum_probs=29.9
Q ss_pred hcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 504 EEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 504 ~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.-.+|.|||+|.+|+.++++|+..|. +++++|.+
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~------~V~~~dr~ 53 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGF------KVTVWNRT 53 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCC------eEEEEeCC
Confidence 34689999999999999999999997 78888754
No 97
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.58 E-value=0.18 Score=52.75 Aligned_cols=37 Identities=16% Similarity=0.335 Sum_probs=29.1
Q ss_pred HHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 501 KKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 501 ~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
..+...+|.|||+|.+|+.+++.|+..|. +++++|.+
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~------~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGH------EVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTC------EEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCC------EEEEEcCC
Confidence 35677899999999999999999999987 78888743
No 98
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=92.56 E-value=0.25 Score=55.40 Aligned_cols=75 Identities=17% Similarity=0.225 Sum_probs=55.2
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCC---CcEEE
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNN---AVAIS 181 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp---~V~V~ 181 (1093)
-...+|.|+|+|.+|+.+|..|+..|+ ++++|+|.+ ..|++..+..|+...| .+.+.
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~~i~ 67 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF-------------------KDKTKGDAIDLEDALPFTSPKKIY 67 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC-------------------hHHHHHHHhhHhhhhhhcCCcEEE
Confidence 345789999999999999999999998 689999852 2366666666766554 34443
Q ss_pred EeecccchhhhcCCceEEEecC
Q 001356 182 ALTTELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 182 ~~~~~l~~~~l~~~dvVV~~~~ 203 (1093)
.. +.+-+++.|+||.+..
T Consensus 68 --~~--~~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 68 --SA--EYSDAKDADLVVITAG 85 (326)
T ss_dssp --EC--CGGGGTTCSEEEECCC
T ss_pred --EC--cHHHhcCCCEEEECCC
Confidence 22 2346889999998864
No 99
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=92.39 E-value=0.37 Score=53.65 Aligned_cols=105 Identities=10% Similarity=0.147 Sum_probs=64.3
Q ss_pred HhhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEe
Q 001356 105 RLFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISAL 183 (1093)
Q Consensus 105 kL~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~ 183 (1093)
.+...+|||.|+ |.+|.++++.|...|. +|+++|...-... . .+..+.....++..
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~-------------------~~~~~~~~~~~~~~ 80 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRK---R-------------------NVEHWIGHENFELI 80 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCG---G-------------------GTGGGTTCTTEEEE
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCC-EEEEEeCCCccch---h-------------------hhhhhccCCceEEE
Confidence 345678999997 7799999999999995 6777765321000 0 00111111234555
Q ss_pred ecccchhhhcCCceEEEecCC---------HH--------HHHHHHHHHHhcCCCcceEeeeecceeE
Q 001356 184 TTELTKEKLSDFQAVVFTDIS---------LE--------KAVEFDDYCHNHQPPIAFIKSEVRGLFG 234 (1093)
Q Consensus 184 ~~~l~~~~l~~~dvVV~~~~~---------~~--------~~~~ln~~c~~~~~~ip~I~~~~~G~~G 234 (1093)
..++.+..+.++|+||.+... .. ....+-++|++.+ +.+|..++.+.+|
T Consensus 81 ~~D~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~v~g 146 (343)
T 2b69_A 81 NHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--ARLLLASTSEVYG 146 (343)
T ss_dssp ECCTTSCCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGGB
T ss_pred eCccCChhhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEECcHHHhC
Confidence 556655556789999976431 11 1235567888888 7888888777665
No 100
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=92.37 E-value=0.25 Score=52.12 Aligned_cols=92 Identities=16% Similarity=0.126 Sum_probs=61.7
Q ss_pred hcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecc
Q 001356 107 FASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTE 186 (1093)
Q Consensus 107 ~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~ 186 (1093)
...+|+|+|+|.+|..+++.|...|. ++++|.+.- ++ +.+. +.+.+ ...+
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~~-------------------~~----~~~~---~~~~~--i~gd 57 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV--FVLAEDENV-------------------RK----KVLR---SGANF--VHGD 57 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGGG-------------------HH----HHHH---TTCEE--EESC
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe--EEEEECCHH-------------------HH----HHHh---cCCeE--EEcC
Confidence 35689999999999999999999887 888885321 11 2222 33333 3333
Q ss_pred cc-h-----hhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEeeee
Q 001356 187 LT-K-----EKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKSEV 229 (1093)
Q Consensus 187 l~-~-----~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~~~ 229 (1093)
.+ + ..+.++|+||++..+.+....+...+++.++. ..|.+.+
T Consensus 58 ~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~-~~iia~~ 105 (234)
T 2aef_A 58 PTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDES-VRIIAEA 105 (234)
T ss_dssp TTCHHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCSS-SEEEEEC
T ss_pred CCCHHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCCC-CeEEEEE
Confidence 32 1 23678899999988877777888889998832 2444443
No 101
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.36 E-value=0.53 Score=48.85 Aligned_cols=95 Identities=13% Similarity=0.080 Sum_probs=61.2
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeeccc
Q 001356 109 SNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTEL 187 (1093)
Q Consensus 109 s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l 187 (1093)
.+|+|.|+ |++|..+++.|...| .+|++++...-....+.. .++.+..++
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~----------------------------~~~~~~~Dl 55 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG-FEVTAVVRHPEKIKIENE----------------------------HLKVKKADV 55 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSCGGGCCCCCT----------------------------TEEEECCCT
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcCcccchhccC----------------------------ceEEEEecC
Confidence 58999995 679999999999999 488888875433322211 223333333
Q ss_pred ch-----hhhcCCceEEEecC-----------CHHHHHHHHHHHHhcCCCcceEeeeeccee
Q 001356 188 TK-----EKLSDFQAVVFTDI-----------SLEKAVEFDDYCHNHQPPIAFIKSEVRGLF 233 (1093)
Q Consensus 188 ~~-----~~l~~~dvVV~~~~-----------~~~~~~~ln~~c~~~~~~ip~I~~~~~G~~ 233 (1093)
.+ +.++++|+||.+.. +......+-+.|++.+. ..||..++.+.+
T Consensus 56 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~v~~Ss~~~~ 116 (227)
T 3dhn_A 56 SSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGV-NRFLMVGGAGSL 116 (227)
T ss_dssp TCHHHHHHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTC-SEEEEECCSTTS
T ss_pred CCHHHHHHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCC-CEEEEeCChhhc
Confidence 21 24556777776543 23445677788888882 268877776644
No 102
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=92.36 E-value=0.27 Score=53.61 Aligned_cols=35 Identities=23% Similarity=0.360 Sum_probs=32.0
Q ss_pred HhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeC
Q 001356 105 RLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 105 kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
.++.++|+|+|+|++|..+++.|...|+ +|+++|.
T Consensus 126 ~~~~~~v~iiGaG~~g~aia~~L~~~g~-~V~v~~r 160 (275)
T 2hk9_A 126 EVKEKSILVLGAGGASRAVIYALVKEGA-KVFLWNR 160 (275)
T ss_dssp TGGGSEEEEECCSHHHHHHHHHHHHHTC-EEEEECS
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHcCC-EEEEEEC
Confidence 3677899999999999999999999999 9999875
No 103
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.33 E-value=0.54 Score=52.30 Aligned_cols=33 Identities=24% Similarity=0.276 Sum_probs=30.1
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
.+|.|||+|.+|+.+|..|+..|...++|+|.+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 589999999999999999999998669999864
No 104
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.33 E-value=0.41 Score=52.93 Aligned_cols=72 Identities=17% Similarity=0.095 Sum_probs=50.6
Q ss_pred eEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhC----CCcEEEEee
Q 001356 110 NILISGMQGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELN----NAVAISALT 184 (1093)
Q Consensus 110 ~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLN----p~V~V~~~~ 184 (1093)
+|.|+|+|.+|..+|..|+..|. ++++|+|.+. .|++..+-.|+..+ ...+|.+..
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~ 62 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE-------------------DLAVGEAMDLAHAAAGIDKYPKIVGGA 62 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH-------------------HHHHHHHHHHHHHHHTTTCCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh-------------------HHHHHHHHHHHhhhhhcCCCCEEEEeC
Confidence 79999999999999999999996 4899998532 23433333444433 345666543
Q ss_pred cccchhhhcCCceEEEecC
Q 001356 185 TELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 185 ~~l~~~~l~~~dvVV~~~~ 203 (1093)
+ .+-+++.|+||.+..
T Consensus 63 d---~~a~~~aDiVViaag 78 (294)
T 1oju_A 63 D---YSLLKGSEIIVVTAG 78 (294)
T ss_dssp C---GGGGTTCSEEEECCC
T ss_pred C---HHHhCCCCEEEECCC
Confidence 2 567889999998754
No 105
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.24 E-value=0.31 Score=54.74 Aligned_cols=75 Identities=17% Similarity=0.214 Sum_probs=53.8
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCc--EEEEee
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAV--AISALT 184 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V--~V~~~~ 184 (1093)
..+|.|+|+|.+|+.+|..|+..|. ++++|+|.+ ..|++..+..|+...|.. .+....
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~v~i~~ 65 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN-------------------KEKAMGDVMDLNHGKAFAPQPVKTSY 65 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHHTGGGSSSCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc-------------------hHHHHHHHHHHHhccccccCCeEEEe
Confidence 4689999999999999999999997 689999852 346666566666655432 233333
Q ss_pred cccchhhhcCCceEEEecC
Q 001356 185 TELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 185 ~~l~~~~l~~~dvVV~~~~ 203 (1093)
.. .+-+++.|+||.+..
T Consensus 66 ~~--~~a~~~aDvVvi~ag 82 (326)
T 3pqe_A 66 GT--YEDCKDADIVCICAG 82 (326)
T ss_dssp EC--GGGGTTCSEEEECCS
T ss_pred Cc--HHHhCCCCEEEEecc
Confidence 22 346789999998754
No 106
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.23 E-value=0.08 Score=62.38 Aligned_cols=93 Identities=16% Similarity=0.227 Sum_probs=63.8
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEE
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEA 584 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~ 584 (1093)
.+||+|+|+|-+|..+++.|...|. .+++||.|.=. .+.+... ..+..
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~------~v~vId~d~~~-----------------------~~~~~~~---~~~~~ 50 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENN------DITIVDKDGDR-----------------------LRELQDK---YDLRV 50 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTE------EEEEEESCHHH-----------------------HHHHHHH---SSCEE
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCC------CEEEEECCHHH-----------------------HHHHHHh---cCcEE
Confidence 4689999999999999999998887 89999966321 1222221 12344
Q ss_pred EecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhccccc-ccc
Q 001356 585 LQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYF-QKP 631 (1093)
Q Consensus 585 ~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~-~~p 631 (1093)
+.+.... ...+...-.+++|++|.++++-++-..+...+... +.|
T Consensus 51 i~Gd~~~--~~~L~~Agi~~ad~~ia~t~~De~Nl~~~~~Ak~~~~~~ 96 (461)
T 4g65_A 51 VNGHASH--PDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTLFNTP 96 (461)
T ss_dssp EESCTTC--HHHHHHHTTTTCSEEEECCSCHHHHHHHHHHHHHHHCCS
T ss_pred EEEcCCC--HHHHHhcCCCcCCEEEEEcCChHHHHHHHHHHHHhcCCc
Confidence 5444332 23344455688999999999998888777776553 444
No 107
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=92.15 E-value=0.22 Score=55.99 Aligned_cols=78 Identities=14% Similarity=0.220 Sum_probs=55.3
Q ss_pred HHhhcCeEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCC---CcE
Q 001356 104 RRLFASNILISGMQGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNN---AVA 179 (1093)
Q Consensus 104 ~kL~~s~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp---~V~ 179 (1093)
......+|.|+|+|.+|+.+|..|++.|. ..++|+|-+ ..|++..+..|+...+ ...
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~~~~g~a~DL~~~~~~~~~~~ 75 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDLADELALVDVI-------------------EDKLKGEMMDLQHGSLFLKTPK 75 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC-------------------HHHHHHHHHHHHHTGGGCSCCE
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC-------------------hHHHHHHHHhhhhhhhccCCCe
Confidence 45677899999999999999999999997 589999842 3467777777776543 223
Q ss_pred EEEeecccchhhhcCCceEEEecC
Q 001356 180 ISALTTELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 180 V~~~~~~l~~~~l~~~dvVV~~~~ 203 (1093)
+.. ..+. +-+++.|+||.+..
T Consensus 76 i~~-~~d~--~~~~~aDiVvi~aG 96 (331)
T 4aj2_A 76 IVS-SKDY--SVTANSKLVIITAG 96 (331)
T ss_dssp EEE-CSSG--GGGTTEEEEEECCS
T ss_pred EEE-cCCH--HHhCCCCEEEEccC
Confidence 322 2222 35889999998743
No 108
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=92.14 E-value=0.19 Score=54.15 Aligned_cols=75 Identities=17% Similarity=0.159 Sum_probs=52.1
Q ss_pred cEEEEcc-CcchHHHHHHHHHc-ccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEE
Q 001356 507 KVFVVGS-GALGCEFLKNLALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEA 584 (1093)
Q Consensus 507 ~VlivG~-GgiG~e~lknLa~~-Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~ 584 (1093)
||.|+|| |.+|..+++.+... |+ --+-++|.+
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~-----elva~~d~~----------------------------------------- 35 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDL-----TLSAELDAG----------------------------------------- 35 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTC-----EEEEEECTT-----------------------------------------
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCC-----EEEEEEccC-----------------------------------------
Confidence 7999997 99999999998765 66 223356532
Q ss_pred EecccCccccccchhhhh-ccCCEEEEccCCHHHHHHHhhcccccccceEeccccCc
Q 001356 585 LQIRANPETENVFNDTFW-ENLNVVVNALDNVNARLYIDQRCLYFQKPLLESGTLGA 640 (1093)
Q Consensus 585 ~~~~v~~~~~~~~~~~f~-~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~sgt~G~ 640 (1093)
.+ + ++++ ...|+|||++ ++.+-...-..|.++++|+|- ||.|+
T Consensus 36 ------~d----l-~~~~~~~~DvvIDfT-~p~a~~~~~~~a~~~g~~~Vi-gTTG~ 79 (245)
T 1p9l_A 36 ------DP----L-SLLTDGNTEVVIDFT-HPDVVMGNLEFLIDNGIHAVV-GTTGF 79 (245)
T ss_dssp ------CC----T-HHHHHTTCCEEEECS-CTTTHHHHHHHHHHTTCEEEE-CCCCC
T ss_pred ------CC----H-HHHhccCCcEEEEcc-ChHHHHHHHHHHHHcCCCEEE-cCCCC
Confidence 00 1 1122 3789999999 455556666789999999984 56554
No 109
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.07 E-value=0.44 Score=53.12 Aligned_cols=84 Identities=13% Similarity=0.032 Sum_probs=53.7
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeeccc
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTEL 187 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l 187 (1093)
..+|.|||+|.+|..+|++|+..|...++++|.+.-. ..|++...+.+.+.. + + ..+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~----------------~~~~~~~~~~~~~~g--~---~-~~s- 80 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFND----------------PAASGALRARAAELG--V---E-PLD- 80 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGC----------------TTTHHHHHHHHHHTT--C---E-EES-
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCcc----------------ccchHHHHHHHHHCC--C---C-CCC-
Confidence 4689999999999999999999996688898864210 013444444554432 2 1 101
Q ss_pred chhhhcCCceEEEecCCHHHHHHHHHH
Q 001356 188 TKEKLSDFQAVVFTDISLEKAVEFDDY 214 (1093)
Q Consensus 188 ~~~~l~~~dvVV~~~~~~~~~~~ln~~ 214 (1093)
..+.+.+.|+||.|..+......+.++
T Consensus 81 ~~e~~~~aDvVi~avp~~~~~~~~~~i 107 (317)
T 4ezb_A 81 DVAGIACADVVLSLVVGAATKAVAASA 107 (317)
T ss_dssp SGGGGGGCSEEEECCCGGGHHHHHHHH
T ss_pred HHHHHhcCCEEEEecCCHHHHHHHHHH
Confidence 234667889988887655444444333
No 110
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=91.99 E-value=0.39 Score=50.09 Aligned_cols=37 Identities=27% Similarity=0.310 Sum_probs=28.9
Q ss_pred HHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 104 RRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 104 ~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
-++...+|.|||+|.+|+.+++.|...|. +++++|.+
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTC-EEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 35677899999999999999999999996 78888753
No 111
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=91.94 E-value=0.24 Score=53.18 Aligned_cols=63 Identities=19% Similarity=0.237 Sum_probs=44.6
Q ss_pred HhcCcEEEEcc-C-cchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCC
Q 001356 503 LEEAKVFVVGS-G-ALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHL 580 (1093)
Q Consensus 503 L~~~~VlivG~-G-giG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~ 580 (1093)
+++++|+|.|+ | |||.++++.|+..|. +++++|.+ ..+...+.+.+++.. ..
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~-~~ 73 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA------DVVISDYH-------------------ERRLGETRDQLADLG-LG 73 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHTTC-SS
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC------EEEEecCC-------------------HHHHHHHHHHHHhcC-CC
Confidence 56789999998 7 899999999999997 78888743 123444455554443 34
Q ss_pred EEEEEecccCc
Q 001356 581 NTEALQIRANP 591 (1093)
Q Consensus 581 ~i~~~~~~v~~ 591 (1093)
++..+..++..
T Consensus 74 ~~~~~~~Dl~~ 84 (266)
T 3o38_A 74 RVEAVVCDVTS 84 (266)
T ss_dssp CEEEEECCTTC
T ss_pred ceEEEEeCCCC
Confidence 66667666654
No 112
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=91.92 E-value=0.088 Score=59.43 Aligned_cols=110 Identities=15% Similarity=0.148 Sum_probs=62.7
Q ss_pred HHHHhcCcEEEEc-cCcchHHHHHHHHHc-ccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhC
Q 001356 500 QKKLEEAKVFVVG-SGALGCEFLKNLALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALIN 577 (1093)
Q Consensus 500 q~~L~~~~VlivG-~GgiG~e~lknLa~~-Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~n 577 (1093)
...++.++|+|.| .|.||+.+++.|+.. |. +++++|...-.... +.
T Consensus 19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~------~V~~~~r~~~~~~~-----~~--------------------- 66 (372)
T 3slg_A 19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDW------EVFGMDMQTDRLGD-----LV--------------------- 66 (372)
T ss_dssp ----CCCEEEEESCSSHHHHHHHHHHHHHSSC------EEEEEESCCTTTGG-----GG---------------------
T ss_pred CcccCCCEEEEECCCChHHHHHHHHHHhCCCC------EEEEEeCChhhhhh-----hc---------------------
Confidence 4456778999999 599999999999998 76 78888753211000 00
Q ss_pred CCCEEEEEecccCccccccchhhhhccCCEEEEccCCHHH-----------------HHHHhhcccccccceEeccccCc
Q 001356 578 PHLNTEALQIRANPETENVFNDTFWENLNVVVNALDNVNA-----------------RLYIDQRCLYFQKPLLESGTLGA 640 (1093)
Q Consensus 578 p~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~a-----------------R~~i~~~c~~~~~pli~sgt~G~ 640 (1093)
..-.++.+..++..+.+.+ ...++++|+||.+...... -..+-+.|...++.+|..++.+.
T Consensus 67 ~~~~v~~~~~Dl~~d~~~~--~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~v 144 (372)
T 3slg_A 67 KHERMHFFEGDITINKEWV--EYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEV 144 (372)
T ss_dssp GSTTEEEEECCTTTCHHHH--HHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGG
T ss_pred cCCCeEEEeCccCCCHHHH--HHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHH
Confidence 0124556666665222211 3456789999975432111 02344455555566666666555
Q ss_pred ccc
Q 001356 641 KCN 643 (1093)
Q Consensus 641 ~G~ 643 (1093)
+|.
T Consensus 145 yg~ 147 (372)
T 3slg_A 145 YGM 147 (372)
T ss_dssp GBS
T ss_pred hCC
Confidence 443
No 113
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.91 E-value=0.32 Score=52.62 Aligned_cols=95 Identities=21% Similarity=0.208 Sum_probs=61.2
Q ss_pred hcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecc
Q 001356 107 FASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTE 186 (1093)
Q Consensus 107 ~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~ 186 (1093)
+..+|||.|+|.+|+.+++.|...|. +|+.++...-. + .+.+++ +..+
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~--------------------------~~~~~~--~~~D 49 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGH-EVTGLRRSAQP---M--------------------------PAGVQT--LIAD 49 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC-CEEEEECTTSC---C--------------------------CTTCCE--EECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCccc---c--------------------------ccCCce--EEcc
Confidence 45689999999999999999999997 67777653211 1 122222 2222
Q ss_pred cc-----hhhhcC-CceEEEecC------------CHHHHHHHHHHHHhcCCCcceEeeeecceeE
Q 001356 187 LT-----KEKLSD-FQAVVFTDI------------SLEKAVEFDDYCHNHQPPIAFIKSEVRGLFG 234 (1093)
Q Consensus 187 l~-----~~~l~~-~dvVV~~~~------------~~~~~~~ln~~c~~~~~~ip~I~~~~~G~~G 234 (1093)
+. .+.+++ +|+||.+.. +......+-+.|++.+. ..||..++.+.||
T Consensus 50 l~d~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-~~~v~~SS~~vyg 114 (286)
T 3gpi_A 50 VTRPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPL-QHVFFVSSTGVYG 114 (286)
T ss_dssp TTCGGGCTTGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCC-CEEEEEEEGGGCC
T ss_pred CCChHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CEEEEEcccEEEc
Confidence 21 123444 788886531 34456677788887772 3688888888776
No 114
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.88 E-value=0.36 Score=53.04 Aligned_cols=32 Identities=25% Similarity=0.373 Sum_probs=28.8
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.+|.|||+|.+|+.++++|+..|. +++++|.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC------eEEEEcCC
Confidence 589999999999999999999997 78888744
No 115
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=91.87 E-value=0.26 Score=50.05 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=28.8
Q ss_pred cCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 505 EAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 505 ~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
+++|+|.|+ |+||.++++.|+..|. ++++++.+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~------~V~~~~r~ 36 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGY------EVTVLVRD 36 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC------eEEEEEeC
Confidence 368999997 9999999999999986 88888754
No 116
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.87 E-value=0.28 Score=55.84 Aligned_cols=115 Identities=16% Similarity=0.187 Sum_probs=67.2
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHh-CCCcEEEEee
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQEL-NNAVAISALT 184 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eL-Np~V~V~~~~ 184 (1093)
++..+|.|||+|.+|..+|++|...|. .++++|.+.-....+... |-..+....+.+... .|++-+....
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~--------g~~~~~s~~e~~~~a~~~DvVi~~vp 90 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE--------GIAGARSIEEFCAKLVKPRVVWLMVP 90 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT--------TCBCCSSHHHHHHHSCSSCEEEECSC
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC--------CCEEeCCHHHHHhcCCCCCEEEEeCC
Confidence 345789999999999999999999995 789998764322222111 100011112222222 2455555444
Q ss_pred cccch-------hhhcCCceEEEecC-CHHHHHHHHHHHHhcCCCcceEeeeecc
Q 001356 185 TELTK-------EKLSDFQAVVFTDI-SLEKAVEFDDYCHNHQPPIAFIKSEVRG 231 (1093)
Q Consensus 185 ~~l~~-------~~l~~~dvVV~~~~-~~~~~~~ln~~c~~~~~~ip~I~~~~~G 231 (1093)
....+ ..++.-++||++.. ......++.+.+.+++ +.|+.+.+.|
T Consensus 91 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g--~~~vdapVsG 143 (358)
T 4e21_A 91 AAVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQG--ITYVDVGTSG 143 (358)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTT--CEEEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCC--CEEEeCCCCC
Confidence 33111 12334467777654 5556667777888888 7888766544
No 117
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.80 E-value=0.39 Score=53.66 Aligned_cols=77 Identities=19% Similarity=0.128 Sum_probs=52.4
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHh----CCCcEEE
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQEL----NNAVAIS 181 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eL----Np~V~V~ 181 (1093)
++..+|.|+|+|.+|+.+|..|+..|.+.++|+|.+.. ..|++..+..|... ....+|.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~-----------------~~~~~g~a~dl~~~~~~~~~~~~i~ 68 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQL-----------------ENPTKGKALDMLEASPVQGFDANII 68 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGG-----------------HHHHHHHHHHHHHHHHHHTCCCCEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccch-----------------HHHHHHhhhhHHHhhhhccCCCEEE
Confidence 44578999999999999999999999989999996420 11333333333322 2344555
Q ss_pred EeecccchhhhcCCceEEEec
Q 001356 182 ALTTELTKEKLSDFQAVVFTD 202 (1093)
Q Consensus 182 ~~~~~l~~~~l~~~dvVV~~~ 202 (1093)
.... .+-+++.|+||.+.
T Consensus 69 ~t~d---~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 69 GTSD---YADTADSDVVVITA 86 (315)
T ss_dssp EESC---GGGGTTCSEEEECC
T ss_pred EcCC---HHHhCCCCEEEEeC
Confidence 4322 35678999999885
No 118
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.68 E-value=0.3 Score=54.34 Aligned_cols=39 Identities=21% Similarity=0.190 Sum_probs=26.8
Q ss_pred HHHHhhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 102 TMRRLFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 102 ~q~kL~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
.++.+..++|||.|+ |.+|..+++.|...|. +|+++|..
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 52 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLR 52 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCC
Confidence 356778889999997 7799999999999995 67777654
No 119
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=91.57 E-value=0.63 Score=51.43 Aligned_cols=72 Identities=17% Similarity=0.139 Sum_probs=51.4
Q ss_pred eEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHH----hCCCcEEEEee
Q 001356 110 NILISGMQGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQE----LNNAVAISALT 184 (1093)
Q Consensus 110 ~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~e----LNp~V~V~~~~ 184 (1093)
+|.|||+|++|+.+|-.|+..|. +++.|+|- -+.|++..+--|+. ++...++....
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di-------------------~~~~~~G~a~DL~h~~~~~~~~~~i~~~~ 62 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI-------------------AEDLAVGEAMDLAHAAAGIDKYPKIVGGA 62 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECS-------------------SHHHHHHHHHHHHHHHGGGTCCCEEEEES
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC-------------------CCCcchhhhhhhhcccccCCCCCeEecCC
Confidence 79999999999999999998885 88999984 22355555555665 33345554422
Q ss_pred cccchhhhcCCceEEEecC
Q 001356 185 TELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 185 ~~l~~~~l~~~dvVV~~~~ 203 (1093)
+.+-+++.|+||.+..
T Consensus 63 ---d~~~~~~aDvVvitAG 78 (294)
T 2x0j_A 63 ---DYSLLKGSEIIVVTAG 78 (294)
T ss_dssp ---CGGGGTTCSEEEECCC
T ss_pred ---CHHHhCCCCEEEEecC
Confidence 2346889999998754
No 120
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.56 E-value=0.77 Score=51.48 Aligned_cols=74 Identities=19% Similarity=0.160 Sum_probs=50.3
Q ss_pred hcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHH----HHHHHhCCCcEEEE
Q 001356 107 FASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASI----QKLQELNNAVAISA 182 (1093)
Q Consensus 107 ~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~----~~L~eLNp~V~V~~ 182 (1093)
...+|.|||+|.+|..+|..|+..|...++|+|.+. .+++..+ +.+..+....++..
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~-------------------~~l~~~~~~l~~~~~~~~~~~~i~~ 73 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE-------------------GVPQGKALDLNHCMALIGSPAKIFG 73 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH-------------------HHHHHHHHHHHhHhhccCCCCEEEE
Confidence 346899999999999999999999995599998642 1222222 22223333455665
Q ss_pred eecccchhhhcCCceEEEec
Q 001356 183 LTTELTKEKLSDFQAVVFTD 202 (1093)
Q Consensus 183 ~~~~l~~~~l~~~dvVV~~~ 202 (1093)
..+ + +-+++.|+||.+.
T Consensus 74 t~d-~--~al~~aD~VI~av 90 (328)
T 2hjr_A 74 ENN-Y--EYLQNSDVVIITA 90 (328)
T ss_dssp ESC-G--GGGTTCSEEEECC
T ss_pred CCC-H--HHHCCCCEEEEcC
Confidence 432 3 4578999999986
No 121
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=91.53 E-value=0.83 Score=49.95 Aligned_cols=68 Identities=16% Similarity=0.227 Sum_probs=52.4
Q ss_pred HHHHhhcCeEEEEcC-ChhHHHHHHHHHHhCCc--eEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCc
Q 001356 102 TMRRLFASNILISGM-QGLGAEIAKNLILAGVK--SVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAV 178 (1093)
Q Consensus 102 ~q~kL~~s~VlIiG~-gglGseiaKnLvlaGVg--~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V 178 (1093)
.+..|.+++|+|.|+ ||+|.++|+.|+..|.+ ++.++|.+ ..+.+.+++.+.+.++..
T Consensus 27 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~ 87 (287)
T 3rku_A 27 AAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR-------------------LEKLEELKKTIDQEFPNA 87 (287)
T ss_dssp HHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC-------------------HHHHHHHHHHHHHHCTTC
T ss_pred chhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC-------------------HHHHHHHHHHHHhhCCCC
Confidence 456788999999985 68999999999999875 77777642 235667777888887777
Q ss_pred EEEEeecccc
Q 001356 179 AISALTTELT 188 (1093)
Q Consensus 179 ~V~~~~~~l~ 188 (1093)
++..+..+++
T Consensus 88 ~~~~~~~Dv~ 97 (287)
T 3rku_A 88 KVHVAQLDIT 97 (287)
T ss_dssp EEEEEECCTT
T ss_pred eEEEEECCCC
Confidence 7777766654
No 122
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.51 E-value=0.8 Score=50.70 Aligned_cols=71 Identities=23% Similarity=0.292 Sum_probs=48.9
Q ss_pred eEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhC---CCcEEEEeec
Q 001356 110 NILISGMQGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELN---NAVAISALTT 185 (1093)
Q Consensus 110 ~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLN---p~V~V~~~~~ 185 (1093)
+|.|+|+|.+|..+|..|+..|. +.++|+|.+. .|++..+..+.... +.+++.. .
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~i~~--~ 60 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE-------------------DRAQAEAEDIAHAAPVSHGTRVWH--G 60 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH-------------------HHHHHHHHHHTTSCCTTSCCEEEE--E
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH-------------------HHHHHHHHhhhhhhhhcCCeEEEE--C
Confidence 79999999999999999999984 5799998642 13333333343333 3455553 2
Q ss_pred ccchhhhcCCceEEEecC
Q 001356 186 ELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 186 ~l~~~~l~~~dvVV~~~~ 203 (1093)
+.+-+++.|+||.+..
T Consensus 61 --~~~a~~~aDvVIi~~~ 76 (304)
T 2v6b_A 61 --GHSELADAQVVILTAG 76 (304)
T ss_dssp --CGGGGTTCSEEEECC-
T ss_pred --CHHHhCCCCEEEEcCC
Confidence 2345889999999874
No 123
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.46 E-value=0.19 Score=55.96 Aligned_cols=39 Identities=21% Similarity=0.160 Sum_probs=27.6
Q ss_pred HHHHHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 499 LQKKLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 499 ~q~~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.++.+..++|+|.|+ |.||..+++.|+..|. +++++|..
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~------~V~~~~r~ 52 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGR------TVRGFDLR 52 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTC------CEEEEESS
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCC------EEEEEeCC
Confidence 356788899999997 9999999999999997 78887743
No 124
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=91.43 E-value=0.28 Score=56.62 Aligned_cols=71 Identities=27% Similarity=0.404 Sum_probs=50.5
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEee-
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALT- 184 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~- 184 (1093)
+...+|+|+|+|++|..+++.|...|+++|+++|.+. .|++..++.+ . +. +..
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~-------------------~ra~~la~~~---g--~~--~~~~ 218 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY-------------------ERAVELARDL---G--GE--AVRF 218 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH-------------------HHHHHHHHHH---T--CE--ECCG
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH-------------------HHHHHHHHHc---C--Cc--eecH
Confidence 6789999999999999999999999999999987521 2444444333 2 12 111
Q ss_pred cccchhhhcCCceEEEecC
Q 001356 185 TELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 185 ~~l~~~~l~~~dvVV~~~~ 203 (1093)
.++ .+.+.++|+||.|+.
T Consensus 219 ~~l-~~~l~~aDvVi~at~ 236 (404)
T 1gpj_A 219 DEL-VDHLARSDVVVSATA 236 (404)
T ss_dssp GGH-HHHHHTCSEEEECCS
T ss_pred HhH-HHHhcCCCEEEEccC
Confidence 112 245678999999875
No 125
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.42 E-value=0.38 Score=55.79 Aligned_cols=85 Identities=13% Similarity=0.265 Sum_probs=61.0
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeeccc
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTEL 187 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l 187 (1093)
+.+|+|+|+|-+|..+++.|...|+ .++++|.+.- ++ +.+++.. +. ++..+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~-------------------~v----~~~~~~g--~~--vi~GDa 55 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPD-------------------HI----ETLRKFG--MK--VFYGDA 55 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHH-------------------HH----HHHHHTT--CC--CEESCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHH-------------------HH----HHHHhCC--Ce--EEEcCC
Confidence 4589999999999999999999997 6888886432 22 2233322 22 222222
Q ss_pred c-h-----hhhcCCceEEEecCCHHHHHHHHHHHHhcCC
Q 001356 188 T-K-----EKLSDFQAVVFTDISLEKAVEFDDYCHNHQP 220 (1093)
Q Consensus 188 ~-~-----~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~ 220 (1093)
+ + .-+.++++||++.++.+....+-..+++.++
T Consensus 56 t~~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p 94 (413)
T 3l9w_A 56 TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFP 94 (413)
T ss_dssp TCHHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCT
T ss_pred CCHHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCC
Confidence 2 2 2366889999999988888889999999884
No 126
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.39 E-value=0.48 Score=52.82 Aligned_cols=99 Identities=11% Similarity=0.062 Sum_probs=61.9
Q ss_pred hcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEE
Q 001356 504 EEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTE 583 (1093)
Q Consensus 504 ~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~ 583 (1093)
...+|.|||+|.+|+.++++|+..|. -+++++|.+.-.. .|++...+.+.+. .+
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~-----~~V~~~dr~~~~~----------------~~~~~~~~~~~~~--g~--- 76 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNA-----ARLAAYDLRFNDP----------------AASGALRARAAEL--GV--- 76 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTC-----SEEEEECGGGGCT----------------TTHHHHHHHHHHT--TC---
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCC-----CeEEEEeCCCccc----------------cchHHHHHHHHHC--CC---
Confidence 45789999999999999999999993 2888888542100 1333333434332 22
Q ss_pred EEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccc--cccceEecccc
Q 001356 584 ALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLY--FQKPLLESGTL 638 (1093)
Q Consensus 584 ~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~--~~~pli~sgt~ 638 (1093)
... +. .+..++.|+||.|+-.......+...... .+..+|+.++.
T Consensus 77 -~~~----s~-----~e~~~~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~~st~ 123 (317)
T 4ezb_A 77 -EPL----DD-----VAGIACADVVLSLVVGAATKAVAASAAPHLSDEAVFIDLNSV 123 (317)
T ss_dssp -EEE----SS-----GGGGGGCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEECCSC
T ss_pred -CCC----CH-----HHHHhcCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEECCCC
Confidence 000 01 24567899999999887777666554332 34556766543
No 127
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.36 E-value=0.51 Score=53.02 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=51.3
Q ss_pred hcCeEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCC---CcEEEE
Q 001356 107 FASNILISGMQGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNN---AVAISA 182 (1093)
Q Consensus 107 ~~s~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp---~V~V~~ 182 (1093)
...+|.|+|+|.+|+.+|..|+..|+ +.++|+|-+ ..|++..+..|+...+ ...+..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~-------------------~~~~~g~a~DL~~~~~~~~~~~i~~ 80 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVM-------------------EDKLKGEMMDLEHGSLFLHTAKIVS 80 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC-------------------HHHHHHHHHHHHHHGGGSCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC-------------------HHHHHHHHHHhhhhhhcccCCeEEE
Confidence 34689999999999999999999997 689999852 2244444445554322 344443
Q ss_pred eecccchhhhcCCceEEEec
Q 001356 183 LTTELTKEKLSDFQAVVFTD 202 (1093)
Q Consensus 183 ~~~~l~~~~l~~~dvVV~~~ 202 (1093)
. .+.. -+++.|+||.+.
T Consensus 81 t-~d~~--~~~daDiVIita 97 (330)
T 3ldh_A 81 G-KDYS--VSAGSKLVVITA 97 (330)
T ss_dssp E-SSSC--SCSSCSEEEECC
T ss_pred c-CCHH--HhCCCCEEEEeC
Confidence 2 2332 388999999873
No 128
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=91.34 E-value=0.26 Score=54.78 Aligned_cols=37 Identities=19% Similarity=0.291 Sum_probs=27.5
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.+..++|+|.|+ |.||..+++.|+..|- .-+++.+|.
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~----~~~v~~~~~ 58 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYE----TYKIINFDA 58 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCT----TEEEEEEEC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCC----CcEEEEEec
Confidence 356679999997 9999999999999993 016666664
No 129
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=91.27 E-value=0.22 Score=56.16 Aligned_cols=106 Identities=12% Similarity=0.112 Sum_probs=63.2
Q ss_pred HHHHHhhcCeEEEEcC-ChhHHHHHHHHHHh-CCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCc
Q 001356 101 ETMRRLFASNILISGM-QGLGAEIAKNLILA-GVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAV 178 (1093)
Q Consensus 101 ~~q~kL~~s~VlIiG~-gglGseiaKnLvla-GVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V 178 (1093)
.++..|...+|||.|+ |.+|+.+++.|... |. +|+++|...-.... +...-
T Consensus 17 ~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~--------------------------~~~~~ 69 (372)
T 3slg_A 17 QGPGSMKAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGD--------------------------LVKHE 69 (372)
T ss_dssp ------CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGG--------------------------GGGST
T ss_pred cCCcccCCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhh--------------------------hccCC
Confidence 3566677889999995 77999999999998 64 78887753211110 00011
Q ss_pred EEEEeecccc-h-----hhhcCCceEEEecC--CHH---------------HHHHHHHHHHhcCCCcceEeeeecceeEE
Q 001356 179 AISALTTELT-K-----EKLSDFQAVVFTDI--SLE---------------KAVEFDDYCHNHQPPIAFIKSEVRGLFGN 235 (1093)
Q Consensus 179 ~V~~~~~~l~-~-----~~l~~~dvVV~~~~--~~~---------------~~~~ln~~c~~~~~~ip~I~~~~~G~~G~ 235 (1093)
.++.+..+++ + +.++++|+||.+.. ... ....+-++|++.+ ..||..++.+.+|.
T Consensus 70 ~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~ 147 (372)
T 3slg_A 70 RMHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGM 147 (372)
T ss_dssp TEEEEECCTTTCHHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBS
T ss_pred CeEEEeCccCCCHHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCC
Confidence 3444444444 2 24557788886432 111 1145667888888 68999888877764
No 130
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.23 E-value=0.73 Score=50.32 Aligned_cols=32 Identities=31% Similarity=0.405 Sum_probs=29.2
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
.+|.|||+|.+|+.+|..|+.+|. +++++|.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 689999999999999999999998 78888863
No 131
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=91.22 E-value=0.48 Score=51.21 Aligned_cols=86 Identities=15% Similarity=0.233 Sum_probs=53.7
Q ss_pred HHhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCC
Q 001356 502 KLEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHL 580 (1093)
Q Consensus 502 ~L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~ 580 (1093)
.+.+++|+|.| .|+||.++++.|+..|. +++++|.+. .+.+.+++.++......
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~ 83 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGL------KVVGCARTV-------------------GNIEELAAECKSAGYPG 83 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHTTCSS
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEECCh-------------------HHHHHHHHHHHhcCCCc
Confidence 46778999998 59999999999999997 788876431 23344555565555445
Q ss_pred EEEEEecccCcccc--ccch--hhhhccCCEEEEcc
Q 001356 581 NTEALQIRANPETE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 581 ~i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~al 612 (1093)
++..+..++..... ..+. .+-+..+|+||++.
T Consensus 84 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~A 119 (279)
T 1xg5_A 84 TLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNA 119 (279)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECC
T ss_pred eEEEEEecCCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 66666666653221 1110 01123677777654
No 132
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=91.20 E-value=0.35 Score=53.81 Aligned_cols=106 Identities=11% Similarity=0.156 Sum_probs=60.3
Q ss_pred hhcCeEEEEcC-ChhHHHHHHHHHHhCCc-eEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEe
Q 001356 106 LFASNILISGM-QGLGAEIAKNLILAGVK-SVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISAL 183 (1093)
Q Consensus 106 L~~s~VlIiG~-gglGseiaKnLvlaGVg-~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~ 183 (1093)
+...+|||.|+ |.+|..+++.|...|-. +++.+|....... .+.+..+...-.++.+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~---------------------~~~l~~~~~~~~~~~~ 80 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN---------------------LNNVKSIQDHPNYYFV 80 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC---------------------GGGGTTTTTCTTEEEE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc---------------------hhhhhhhccCCCeEEE
Confidence 44568999998 77999999999999942 5555554321100 0011122222234444
Q ss_pred ecccch-----hhhcC--CceEEEecCC-----------------HHHHHHHHHHHHhcCCCcc-eEeeeecceeE
Q 001356 184 TTELTK-----EKLSD--FQAVVFTDIS-----------------LEKAVEFDDYCHNHQPPIA-FIKSEVRGLFG 234 (1093)
Q Consensus 184 ~~~l~~-----~~l~~--~dvVV~~~~~-----------------~~~~~~ln~~c~~~~~~ip-~I~~~~~G~~G 234 (1093)
..++++ +.+++ +|+||.+... ......+-++|++.+ ++ ||..++.+.+|
T Consensus 81 ~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~v~~SS~~vy~ 154 (346)
T 4egb_A 81 KGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP--HIKLVQVSTDEVYG 154 (346)
T ss_dssp ECCTTCHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST--TSEEEEEEEGGGGC
T ss_pred EcCCCCHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEeCchHHhC
Confidence 444432 23333 7777755321 112356678888888 55 88888877765
No 133
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=91.20 E-value=1 Score=50.06 Aligned_cols=73 Identities=18% Similarity=0.122 Sum_probs=50.4
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHH----hCCCcEEEEee
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQE----LNNAVAISALT 184 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~e----LNp~V~V~~~~ 184 (1093)
.+|.|||+|.+|..++..|+..|.-.++|+|-+. .|++..+..|.+ ....+++....
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~ 63 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE-------------------GVPQGKALDLYEASPIEGFDVRVTGTN 63 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCCEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc-------------------cHHHHHHHhHHHhHhhcCCCeEEEECC
Confidence 5899999999999999999999973499998532 122222233333 34456666543
Q ss_pred cccchhhhcCCceEEEecC
Q 001356 185 TELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 185 ~~l~~~~l~~~dvVV~~~~ 203 (1093)
+ . +-+++.|+||.+..
T Consensus 64 d-~--~a~~~aD~Vi~a~g 79 (309)
T 1ur5_A 64 N-Y--ADTANSDVIVVTSG 79 (309)
T ss_dssp C-G--GGGTTCSEEEECCC
T ss_pred C-H--HHHCCCCEEEEcCC
Confidence 3 2 45789999999863
No 134
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.13 E-value=0.34 Score=54.35 Aligned_cols=36 Identities=22% Similarity=0.420 Sum_probs=31.4
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
++..||.|||+|.+|+.++..|+..|+ ++|+++|-+
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~-----~~v~L~Di~ 40 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKEL-----GDVVLFDIA 40 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEeCC
Confidence 556799999999999999999999998 589999843
No 135
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.12 E-value=0.54 Score=52.18 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=30.3
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
..+|.|||+|.+|+.++++|+..|. ..++++|.+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~-----~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGA-----IDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSC-----CEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC-----CeEEEEcCC
Confidence 4689999999999999999999997 689999865
No 136
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=91.10 E-value=0.41 Score=51.56 Aligned_cols=85 Identities=20% Similarity=0.150 Sum_probs=57.5
Q ss_pred HhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
|.+++++|.| .||||.++++.|+..|. +++++|.+ ..+.+.+++.+....+..+
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~ 60 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA------AVAFCARD-------------------GERLRAAESALRQRFPGAR 60 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHHHSTTCC
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEeCC-------------------HHHHHHHHHHHHHhcCCce
Confidence 5678899998 48999999999999997 78888743 2345566667777677767
Q ss_pred EEEEecccCcccc--ccch--hhhhccCCEEEEcc
Q 001356 582 TEALQIRANPETE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 582 i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~al 612 (1093)
+..+..++.+... ..++ .+-+...|++|++.
T Consensus 61 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnA 95 (265)
T 3lf2_A 61 LFASVCDVLDALQVRAFAEACERTLGCASILVNNA 95 (265)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHCSCSEEEECC
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 7777777764321 1111 01234677777664
No 137
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=91.10 E-value=0.44 Score=53.08 Aligned_cols=115 Identities=10% Similarity=0.031 Sum_probs=66.9
Q ss_pred HHHHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCC
Q 001356 500 QKKLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINP 578 (1093)
Q Consensus 500 q~~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np 578 (1093)
+..++.++|+|.|+ |.||+.+++.|...|. +++++|...-. .......+....+
T Consensus 20 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~-------------------~~~~~~~~~~~~~ 74 (351)
T 3ruf_A 20 QLIFSPKTWLITGVAGFIGSNLLEKLLKLNQ------VVIGLDNFSTG-------------------HQYNLDEVKTLVS 74 (351)
T ss_dssp HHHHSCCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECCSSC-------------------CHHHHHHHHHTSC
T ss_pred hCCCCCCeEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCCCCC-------------------chhhhhhhhhccc
Confidence 34677899999995 9999999999999997 77777632110 0011122222211
Q ss_pred C---CEEEEEecccCccccccchhhhhccCCEEEEccCCH-----------------HHHHHHhhccccccc-ceEeccc
Q 001356 579 H---LNTEALQIRANPETENVFNDTFWENLNVVVNALDNV-----------------NARLYIDQRCLYFQK-PLLESGT 637 (1093)
Q Consensus 579 ~---~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~-----------------~aR~~i~~~c~~~~~-pli~sgt 637 (1093)
. -+++.+..++.+.. .+ ...++++|+||.+.... ..-..+-+.|...++ .+|..++
T Consensus 75 ~~~~~~~~~~~~Dl~d~~-~~--~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 75 TEQWSRFCFIEGDIRDLT-TC--EQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp HHHHTTEEEEECCTTCHH-HH--HHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred cccCCceEEEEccCCCHH-HH--HHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 0 24556666665321 11 34567899999886531 111234456666654 4665555
Q ss_pred cCccc
Q 001356 638 LGAKC 642 (1093)
Q Consensus 638 ~G~~G 642 (1093)
.+.+|
T Consensus 152 ~~vyg 156 (351)
T 3ruf_A 152 SSTYG 156 (351)
T ss_dssp GGGGT
T ss_pred HHhcC
Confidence 55444
No 138
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=91.07 E-value=0.32 Score=53.04 Aligned_cols=85 Identities=21% Similarity=0.244 Sum_probs=52.1
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHL 580 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~ 580 (1093)
.+++++|+|.|+ ||||.++++.|+..|. +++++|.+ ..|...+.+.+++.++ -
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~~-~ 62 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGI------MVVLTCRD-------------------VTKGHEAVEKLKNSNH-E 62 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHTTTC-C
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCC------EEEEEeCC-------------------HHHHHHHHHHHHhcCC-C
Confidence 456788899985 8999999999999997 78888643 2344455566665543 3
Q ss_pred EEEEEecccCccccc---cch--hhhhccCCEEEEcc
Q 001356 581 NTEALQIRANPETEN---VFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 581 ~i~~~~~~v~~~~~~---~~~--~~f~~~~DvVi~al 612 (1093)
++..+..++....+. ++. .+-+...|+||++.
T Consensus 63 ~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nA 99 (311)
T 3o26_A 63 NVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNA 99 (311)
T ss_dssp SEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred ceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 566666666543111 110 01134677777664
No 139
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=90.97 E-value=0.34 Score=53.15 Aligned_cols=98 Identities=17% Similarity=0.148 Sum_probs=59.2
Q ss_pred cCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEE
Q 001356 505 EAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTE 583 (1093)
Q Consensus 505 ~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~ 583 (1093)
.++|+|.| .|.||+.+++.|+..|. ++++++.+ .+.. . +. .++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~---~~~~----------------~-----~~------~~~ 45 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN------TPIILTRS---IGNK----------------A-----IN------DYE 45 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC---CC--------------------------------CCE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC------EEEEEeCC---CCcc----------------c-----CC------ceE
Confidence 46899999 59999999999999987 78887754 1100 0 00 233
Q ss_pred EEecccCccccccchhhhhccCCEEEEccC-------------CHHHHHHHhhcccccccc-eEeccccCccc
Q 001356 584 ALQIRANPETENVFNDTFWENLNVVVNALD-------------NVNARLYIDQRCLYFQKP-LLESGTLGAKC 642 (1093)
Q Consensus 584 ~~~~~v~~~~~~~~~~~f~~~~DvVi~alD-------------n~~aR~~i~~~c~~~~~p-li~sgt~G~~G 642 (1093)
.+..++. . +.+ .+.++++|+||.+.. |+..-..+-+.|.+.+++ +|..++.+.+|
T Consensus 46 ~~~~Dl~-~-~~~--~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg 114 (311)
T 3m2p_A 46 YRVSDYT-L-EDL--INQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYS 114 (311)
T ss_dssp EEECCCC-H-HHH--HHHTTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCC
T ss_pred EEEcccc-H-HHH--HHhhcCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhC
Confidence 4444444 1 111 245567888887653 233334555667666665 66555555444
No 140
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.96 E-value=0.62 Score=50.08 Aligned_cols=81 Identities=19% Similarity=0.141 Sum_probs=51.1
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeec
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTT 185 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~ 185 (1093)
+...+|.|||+|.+|..+++.|...|...++++|.+. .+++.+.+.+ . +. .. .
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~-------------------~~~~~~~~~~---g--~~--~~-~ 60 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE-------------------ESARELAQKV---E--AE--YT-T 60 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH-------------------HHHHHHHHHT---T--CE--EE-S
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH-------------------HHHHHHHHHc---C--Cc--ee-C
Confidence 3456899999999999999999999976578877421 1333222221 1 22 21 1
Q ss_pred ccchhhhcCCceEEEecCCHHHHHHHHHH
Q 001356 186 ELTKEKLSDFQAVVFTDISLEKAVEFDDY 214 (1093)
Q Consensus 186 ~l~~~~l~~~dvVV~~~~~~~~~~~ln~~ 214 (1093)
++ ++.+.++|+||.|..+......+.++
T Consensus 61 ~~-~~~~~~~Dvvi~av~~~~~~~v~~~l 88 (266)
T 3d1l_A 61 DL-AEVNPYAKLYIVSLKDSAFAELLQGI 88 (266)
T ss_dssp CG-GGSCSCCSEEEECCCHHHHHHHHHHH
T ss_pred CH-HHHhcCCCEEEEecCHHHHHHHHHHH
Confidence 22 24567899999998655443333333
No 141
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.81 E-value=0.58 Score=51.15 Aligned_cols=81 Identities=15% Similarity=0.164 Sum_probs=52.1
Q ss_pred hcCeEEEEcCChhHHHHHHHHHHhCC--ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEee
Q 001356 107 FASNILISGMQGLGAEIAKNLILAGV--KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALT 184 (1093)
Q Consensus 107 ~~s~VlIiG~gglGseiaKnLvlaGV--g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~ 184 (1093)
...+|.|||+|.+|..+++.|...|. .+|+++|.+. .+++.+.+. . .+ ....
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~-------------------~~~~~l~~~----~-gi--~~~~ 55 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL-------------------DKLDFFKEK----C-GV--HTTQ 55 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS-------------------HHHHHHHHT----T-CC--EEES
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH-------------------HHHHHHHHH----c-CC--EEeC
Confidence 35689999999999999999999996 3688877522 133322222 1 12 2221
Q ss_pred cccchhhhcCCceEEEecCCHHHHHHHHHHH
Q 001356 185 TELTKEKLSDFQAVVFTDISLEKAVEFDDYC 215 (1093)
Q Consensus 185 ~~l~~~~l~~~dvVV~~~~~~~~~~~ln~~c 215 (1093)
. ..+.+.+.|+||.+..+......+.++.
T Consensus 56 ~--~~~~~~~aDvVilav~p~~~~~vl~~l~ 84 (280)
T 3tri_A 56 D--NRQGALNADVVVLAVKPHQIKMVCEELK 84 (280)
T ss_dssp C--HHHHHSSCSEEEECSCGGGHHHHHHHHH
T ss_pred C--hHHHHhcCCeEEEEeCHHHHHHHHHHHH
Confidence 1 2356788999999986544444444443
No 142
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.80 E-value=0.7 Score=49.74 Aligned_cols=96 Identities=10% Similarity=0.014 Sum_probs=59.0
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEE
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEA 584 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~ 584 (1093)
.++|+|.|+|.||+.+++.|...|. +++.++.+. .+...+ .. + .++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~------~V~~~~r~~-------------------~~~~~~----~~--~--~~~~ 51 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW------RIIGTSRNP-------------------DQMEAI----RA--S--GAEP 51 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC------EEEEEESCG-------------------GGHHHH----HH--T--TEEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC------EEEEEEcCh-------------------hhhhhH----hh--C--CCeE
Confidence 4789999999999999999999987 777775321 121111 11 2 3555
Q ss_pred EecccCccccccchhhhhccCCEEEEccC-----CHHHHHHHhhcccc--cc-cceEeccccCccc
Q 001356 585 LQIRANPETENVFNDTFWENLNVVVNALD-----NVNARLYIDQRCLY--FQ-KPLLESGTLGAKC 642 (1093)
Q Consensus 585 ~~~~v~~~~~~~~~~~f~~~~DvVi~alD-----n~~aR~~i~~~c~~--~~-~pli~sgt~G~~G 642 (1093)
+..++.+ + + +.++|+||.+.. +..++..+ +.|.. .+ +.+|..++.+.+|
T Consensus 52 ~~~D~~d-----~--~-~~~~d~vi~~a~~~~~~~~~~~~l~-~a~~~~~~~~~~~v~~Ss~~vyg 108 (286)
T 3ius_A 52 LLWPGEE-----P--S-LDGVTHLLISTAPDSGGDPVLAALG-DQIAARAAQFRWVGYLSTTAVYG 108 (286)
T ss_dssp EESSSSC-----C--C-CTTCCEEEECCCCBTTBCHHHHHHH-HHHHHTGGGCSEEEEEEEGGGGC
T ss_pred EEecccc-----c--c-cCCCCEEEECCCccccccHHHHHHH-HHHHhhcCCceEEEEeecceecC
Confidence 6555543 2 2 678999998873 23334333 44544 33 3466656555544
No 143
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.80 E-value=0.19 Score=58.29 Aligned_cols=90 Identities=18% Similarity=0.183 Sum_probs=61.4
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEE
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEA 584 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~ 584 (1093)
+.+|+|+|+|-+|..+++.|...|+ .+++||.|.-.. +.+++. . +.+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~------~vvvId~d~~~v-----------------------~~~~~~--g--~~v 50 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV------KMVVLDHDPDHI-----------------------ETLRKF--G--MKV 50 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC------CEEEEECCHHHH-----------------------HHHHHT--T--CCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC------CEEEEECCHHHH-----------------------HHHHhC--C--CeE
Confidence 4589999999999999999999998 899999763211 112221 1 223
Q ss_pred EecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccc
Q 001356 585 LQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQ 629 (1093)
Q Consensus 585 ~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~ 629 (1093)
+..+... ...+...-++++|+||.|+++..+-..+-..++..+
T Consensus 51 i~GDat~--~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~ 93 (413)
T 3l9w_A 51 FYGDATR--MDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHF 93 (413)
T ss_dssp EESCTTC--HHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHC
T ss_pred EEcCCCC--HHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhC
Confidence 3333322 222222335789999999999988888777777654
No 144
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=90.77 E-value=0.32 Score=53.98 Aligned_cols=36 Identities=17% Similarity=0.455 Sum_probs=30.8
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.+.+++|+|.|+ |+||..+++.|+..|. +++++|.+
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~------~V~~~~r~ 53 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGH------EILVIDNF 53 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTC------EEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 556789999997 9999999999999986 78888753
No 145
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=90.75 E-value=0.69 Score=51.59 Aligned_cols=71 Identities=23% Similarity=0.254 Sum_probs=48.7
Q ss_pred eEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhC---CCcEEEEeec
Q 001356 110 NILISGMQGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELN---NAVAISALTT 185 (1093)
Q Consensus 110 ~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLN---p~V~V~~~~~ 185 (1093)
+|.|||+|.+|+.++..|+..|. +.++++|.+. .+++.....+.... +.+.+.. .
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~i~~--~ 60 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK-------------------KRAEGDALDLIHGTPFTRRANIYA--G 60 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH-------------------HHHHHHHHHHHHHGGGSCCCEEEE--C
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh-------------------HHHHHHHHHHHhhhhhcCCcEEEe--C
Confidence 79999999999999999999994 5788888532 23333333333322 3445554 2
Q ss_pred ccchhhhcCCceEEEecC
Q 001356 186 ELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 186 ~l~~~~l~~~dvVV~~~~ 203 (1093)
+ .+.++++|+||.+..
T Consensus 61 d--~~~~~~aDvViiav~ 76 (319)
T 1a5z_A 61 D--YADLKGSDVVIVAAG 76 (319)
T ss_dssp C--GGGGTTCSEEEECCC
T ss_pred C--HHHhCCCCEEEEccC
Confidence 2 345789999999875
No 146
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=90.68 E-value=0.47 Score=51.01 Aligned_cols=85 Identities=16% Similarity=0.207 Sum_probs=54.1
Q ss_pred HhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
+.+++++|.| .||||.++++.|+..|. +++++|.+. .+.+.+++.+....+..+
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~ 65 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGA------KLSLVDVSS-------------------EGLEASKAAVLETAPDAE 65 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHHCTTCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHhhcCCce
Confidence 5678899998 59999999999999997 788876321 233445555666655556
Q ss_pred EEEEecccCcccc--ccch--hhhhccCCEEEEcc
Q 001356 582 TEALQIRANPETE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 582 i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~al 612 (1093)
+..+..++.+... ..++ .+-+...|+||++.
T Consensus 66 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nA 100 (267)
T 1iy8_A 66 VLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNA 100 (267)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 7777666654221 1111 01133677777664
No 147
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=90.64 E-value=0.33 Score=54.38 Aligned_cols=37 Identities=16% Similarity=0.320 Sum_probs=32.0
Q ss_pred HHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCc
Q 001356 502 KLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDV 544 (1093)
Q Consensus 502 ~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~ 544 (1093)
.|.+++|.|||+|.||..+++.|...|+ +++.+|...
T Consensus 137 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~------~V~~~dr~~ 173 (324)
T 3hg7_A 137 GLKGRTLLILGTGSIGQHIAHTGKHFGM------KVLGVSRSG 173 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSC
T ss_pred ccccceEEEEEECHHHHHHHHHHHhCCC------EEEEEcCCh
Confidence 4567899999999999999999999988 888887543
No 148
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=90.64 E-value=0.81 Score=47.29 Aligned_cols=91 Identities=18% Similarity=0.184 Sum_probs=58.6
Q ss_pred eEEEEc-CChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecccc
Q 001356 110 NILISG-MQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTELT 188 (1093)
Q Consensus 110 ~VlIiG-~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l~ 188 (1093)
+|+|.| .|++|.++++.|+..|. ++++++.+.-....+ + .++....+++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---------------------------~--~~~~~~~D~~ 51 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY---------------------------N--NVKAVHFDVD 51 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC---------------------------T--TEEEEECCTT
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc---------------------------C--CceEEEeccc
Confidence 699999 67799999999999994 788887643221111 1 2333343432
Q ss_pred h------hhhcCCceEEEecC---------CHHHHHHHHHHHHhcCCCcceEeeeecc
Q 001356 189 K------EKLSDFQAVVFTDI---------SLEKAVEFDDYCHNHQPPIAFIKSEVRG 231 (1093)
Q Consensus 189 ~------~~l~~~dvVV~~~~---------~~~~~~~ln~~c~~~~~~ip~I~~~~~G 231 (1093)
+ +.++++|+||.+.. +......+-+.|++.+. ..||..++.+
T Consensus 52 d~~~~~~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~-~~iv~~SS~~ 108 (219)
T 3dqp_A 52 WTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEV-KRFILLSTIF 108 (219)
T ss_dssp SCHHHHHTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTC-CEEEEECCTT
T ss_pred CCHHHHHHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCC-CEEEEECccc
Confidence 2 24567888887653 34456677888888872 1566655544
No 149
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=90.60 E-value=0.33 Score=54.24 Aligned_cols=35 Identities=20% Similarity=0.344 Sum_probs=30.1
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.+..++|+|.|+ |.||..+++.|+..|. +++++|.
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r 59 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQ------KVVGLDN 59 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEEC
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 366789999997 9999999999999986 7888774
No 150
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.60 E-value=0.48 Score=51.52 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=31.0
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeC
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
+..++|+|+|+||+|..++..|...| .+|+++|.
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~R 150 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLD-CAVTITNR 150 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcC-CEEEEEEC
Confidence 56789999999999999999999999 78999874
No 151
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=90.58 E-value=0.47 Score=50.39 Aligned_cols=63 Identities=17% Similarity=0.283 Sum_probs=44.4
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHL 580 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~ 580 (1093)
++.+++|+|.|+ ||||.++++.|+..|. +++++|.+ ..+.+.+++.+....+
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~~~~~~~-- 58 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGA------AVVVADIN-------------------AEAAEAVAKQIVADGG-- 58 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHHTTC--
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEcCC-------------------HHHHHHHHHHHHhcCC--
Confidence 356788999995 9999999999999998 78888743 2344455555555443
Q ss_pred EEEEEecccCc
Q 001356 581 NTEALQIRANP 591 (1093)
Q Consensus 581 ~i~~~~~~v~~ 591 (1093)
++..+..++..
T Consensus 59 ~~~~~~~D~~~ 69 (253)
T 3qiv_A 59 TAISVAVDVSD 69 (253)
T ss_dssp EEEEEECCTTS
T ss_pred cEEEEEccCCC
Confidence 55566655553
No 152
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.54 E-value=0.77 Score=47.16 Aligned_cols=31 Identities=23% Similarity=0.351 Sum_probs=27.0
Q ss_pred CcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 506 AKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 506 ~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+||+|.|+ |+||.++++.|+..|. ++++++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~------~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGH------EVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCC------EEEEEEc
Confidence 47999995 9999999999999997 7888764
No 153
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.54 E-value=0.81 Score=50.63 Aligned_cols=74 Identities=22% Similarity=0.303 Sum_probs=48.2
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHH---hCCCcEEEEe
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQE---LNNAVAISAL 183 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~e---LNp~V~V~~~ 183 (1093)
..+|+|||+|++|+.++..|+..|. +.++++|.+. .+++..+..+.. +.+.+.+...
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~v~~~ 67 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK-------------------ERVEAEVLDMQHGSSFYPTVSIDGS 67 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH-------------------HHHHHHHHHHHHTGGGSTTCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------hHHHHHHHHHHhhhhhcCCeEEEeC
Confidence 4689999999999999999999995 4799988632 122211111221 2234455432
Q ss_pred ecccchhhhcCCceEEEecC
Q 001356 184 TTELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 184 ~~~l~~~~l~~~dvVV~~~~ 203 (1093)
. +.+.+.++|+||.+..
T Consensus 68 ~---~~~~~~~aD~Vii~v~ 84 (319)
T 1lld_A 68 D---DPEICRDADMVVITAG 84 (319)
T ss_dssp S---CGGGGTTCSEEEECCC
T ss_pred C---CHHHhCCCCEEEECCC
Confidence 1 2345778999999873
No 154
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.52 E-value=0.49 Score=51.52 Aligned_cols=72 Identities=15% Similarity=0.224 Sum_probs=50.2
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeec
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTT 185 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~ 185 (1093)
++.++|+|+|+||.|..++..|...| .+|++++.+ ..|++.+++.+.... .+.+..
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G-~~v~v~~R~-------------------~~~a~~l~~~~~~~~---~~~~~~- 172 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRT-------------------FSKTKELAERFQPYG---NIQAVS- 172 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESS-------------------HHHHHHHHHHHGGGS---CEEEEE-
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEECC-------------------HHHHHHHHHHccccC---CeEEee-
Confidence 56789999999999999999999999 899998752 236666666654321 222221
Q ss_pred ccchhhh-cCCceEEEecC
Q 001356 186 ELTKEKL-SDFQAVVFTDI 203 (1093)
Q Consensus 186 ~l~~~~l-~~~dvVV~~~~ 203 (1093)
+. +.. .++|+||.+..
T Consensus 173 -~~-~~~~~~~DivIn~t~ 189 (272)
T 1p77_A 173 -MD-SIPLQTYDLVINATS 189 (272)
T ss_dssp -GG-GCCCSCCSEEEECCC
T ss_pred -HH-HhccCCCCEEEECCC
Confidence 11 111 37899998874
No 155
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.51 E-value=0.17 Score=49.08 Aligned_cols=86 Identities=14% Similarity=0.115 Sum_probs=54.2
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEE
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEA 584 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~ 584 (1093)
+.+|+|+|+|.+|..+++.|...|. .++++|.|.= ++ +.+++ ..+. .
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~------~v~vid~~~~-------------------~~----~~~~~--~g~~--~ 53 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI------PLVVIETSRT-------------------RV----DELRE--RGVR--A 53 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC------CEEEEESCHH-------------------HH----HHHHH--TTCE--E
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC------CEEEEECCHH-------------------HH----HHHHH--cCCC--E
Confidence 3589999999999999999999997 8999986421 11 22222 1232 3
Q ss_pred EecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcc
Q 001356 585 LQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRC 625 (1093)
Q Consensus 585 ~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c 625 (1093)
+...... ...+...-.+++|+||.|+++...-..+-..+
T Consensus 54 i~gd~~~--~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a 92 (140)
T 3fwz_A 54 VLGNAAN--EEIMQLAHLECAKWLILTIPNGYEAGEIVASA 92 (140)
T ss_dssp EESCTTS--HHHHHHTTGGGCSEEEECCSCHHHHHHHHHHH
T ss_pred EECCCCC--HHHHHhcCcccCCEEEEECCChHHHHHHHHHH
Confidence 4333322 11222223468999999999876554443333
No 156
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=90.50 E-value=0.84 Score=47.97 Aligned_cols=99 Identities=12% Similarity=0.091 Sum_probs=60.9
Q ss_pred cCeEEEEc-CChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecc
Q 001356 108 ASNILISG-MQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTE 186 (1093)
Q Consensus 108 ~s~VlIiG-~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~ 186 (1093)
-++|+|.| .|++|.++++.|+..|--++++++.+.-....+.. + .++.+..+
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~-------------------------~--~~~~~~~D 75 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-------------------------T--NSQIIMGD 75 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCC-------------------------T--TEEEEECC
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccccc-------------------------C--CcEEEEec
Confidence 35799999 57899999999999995578888764322211100 1 23444444
Q ss_pred cch-----hhhcCCceEEEecCC--HH-HHHHHHHHHHhcCCCcceEeeeecceeE
Q 001356 187 LTK-----EKLSDFQAVVFTDIS--LE-KAVEFDDYCHNHQPPIAFIKSEVRGLFG 234 (1093)
Q Consensus 187 l~~-----~~l~~~dvVV~~~~~--~~-~~~~ln~~c~~~~~~ip~I~~~~~G~~G 234 (1093)
+++ ..++++|+||.+... .. ....+-+.|++.+. -.+|..++.+.++
T Consensus 76 l~d~~~~~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~-~~iV~iSS~~~~~ 130 (236)
T 3qvo_A 76 VLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACDV-KRLIFVLSLGIYD 130 (236)
T ss_dssp TTCHHHHHHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTTC-CEEEEECCCCC--
T ss_pred CCCHHHHHHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcCC-CEEEEEecceecC
Confidence 432 356788999876542 22 23456677777772 2477777766654
No 157
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.43 E-value=1.4 Score=48.66 Aligned_cols=109 Identities=18% Similarity=0.206 Sum_probs=63.8
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCC--CcEEEEeec
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNN--AVAISALTT 185 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp--~V~V~~~~~ 185 (1093)
+.||.+||+|-.|..+|+||+.+|. +++++|.+.-....+... |-..+. .+.++-. ++-+.....
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~--------G~~~~~----s~~e~~~~~dvvi~~l~~ 71 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGY-ELVVWNRTASKAEPLTKL--------GATVVE----NAIDAITPGGIVFSVLAD 71 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTC-EEEEC-------CTTTTT--------TCEECS----SGGGGCCTTCEEEECCSS
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHc--------CCeEeC----CHHHHHhcCCceeeeccc
Confidence 4589999999999999999999997 688888654333333211 111111 1122222 232322222
Q ss_pred cc------ch---hhhcCCceEEEec-CCHHHHHHHHHHHHhcCCCcceEeeeecc
Q 001356 186 EL------TK---EKLSDFQAVVFTD-ISLEKAVEFDDYCHNHQPPIAFIKSEVRG 231 (1093)
Q Consensus 186 ~l------~~---~~l~~~dvVV~~~-~~~~~~~~ln~~c~~~~~~ip~I~~~~~G 231 (1093)
.- .. ..+..-++||++. .+++...++.+.+.++| +.|+.+.+.|
T Consensus 72 ~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g--~~~ldapVsG 125 (297)
T 4gbj_A 72 DAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYG--AHYVGAPIFA 125 (297)
T ss_dssp HHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTT--CEEEECCEEC
T ss_pred hhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcC--CceecCCcCC
Confidence 11 11 1234446777654 47888889999999999 8888877665
No 158
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=90.42 E-value=1.5 Score=48.24 Aligned_cols=107 Identities=9% Similarity=0.031 Sum_probs=62.8
Q ss_pred hhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEe-
Q 001356 106 LFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISAL- 183 (1093)
Q Consensus 106 L~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~- 183 (1093)
+...+|||.|+ |++|+++++.|...|. +|++++.+. .+.+.+.+.+.+..+ -.++.+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~-~~~~~~~ 67 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSA-------------------SKLANLQKRWDAKYP-GRFETAV 67 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSH-------------------HHHHHHHHHHHHHST-TTEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCc-------------------ccHHHHHHHhhccCC-CceEEEE
Confidence 34678999997 7899999999999995 677665421 133333344443332 234444
Q ss_pred ecccch-----hhhcCCceEEEecC------CH--------HHHHHHHHHHHh-cCCCcceEeeeecceeE
Q 001356 184 TTELTK-----EKLSDFQAVVFTDI------SL--------EKAVEFDDYCHN-HQPPIAFIKSEVRGLFG 234 (1093)
Q Consensus 184 ~~~l~~-----~~l~~~dvVV~~~~------~~--------~~~~~ln~~c~~-~~~~ip~I~~~~~G~~G 234 (1093)
..++++ +.++++|+||.+.. +. .....+-+.|++ .+. ..+|..++.+.+|
T Consensus 68 ~~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~-~~iv~~SS~~~~~ 137 (342)
T 1y1p_A 68 VEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSV-KRFVLTSSTVSAL 137 (342)
T ss_dssp CSCTTSTTTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTC-CEEEEECCGGGTC
T ss_pred ecCCcChHHHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCC-cEEEEeccHHHhc
Confidence 344432 34667899997642 12 223445567764 331 3677766665543
No 159
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=90.42 E-value=0.8 Score=50.42 Aligned_cols=81 Identities=17% Similarity=0.115 Sum_probs=50.8
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
+.+++|+|.|+ |+||+++++.|+..|. +++++|.+. .+...+.+.+....+ -+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~-~~ 62 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY------KVRGTARSA-------------------SKLANLQKRWDAKYP-GR 62 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESSH-------------------HHHHHHHHHHHHHST-TT
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC------EEEEEeCCc-------------------ccHHHHHHHhhccCC-Cc
Confidence 34678999997 9999999999999986 777776321 122333333333332 23
Q ss_pred EEEE-ecccCccccccchhhhhccCCEEEEcc
Q 001356 582 TEAL-QIRANPETENVFNDTFWENLNVVVNAL 612 (1093)
Q Consensus 582 i~~~-~~~v~~~~~~~~~~~f~~~~DvVi~al 612 (1093)
++.+ ..++.... . + ..+++++|+||.+.
T Consensus 63 ~~~~~~~D~~d~~-~-~-~~~~~~~d~vih~A 91 (342)
T 1y1p_A 63 FETAVVEDMLKQG-A-Y-DEVIKGAAGVAHIA 91 (342)
T ss_dssp EEEEECSCTTSTT-T-T-TTTTTTCSEEEECC
T ss_pred eEEEEecCCcChH-H-H-HHHHcCCCEEEEeC
Confidence 5555 45554321 1 1 24567899999875
No 160
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=90.39 E-value=0.35 Score=51.71 Aligned_cols=65 Identities=12% Similarity=0.195 Sum_probs=47.1
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCC-
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPH- 579 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~- 579 (1093)
.+.+++++|.|+ ||||.++++.|+..|. +++++|.+ ..+.+.+++.+...++.
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~ 58 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY------RVVLIARS-------------------KQNLEKVHDEIMRSNKHV 58 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC------EEEEEESC-------------------HHHHHHHHHHHHHHCTTS
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEECC-------------------HHHHHHHHHHHHHhcccc
Confidence 356778999985 9999999999999997 78888742 23556666777777655
Q ss_pred CEEEEEecccCc
Q 001356 580 LNTEALQIRANP 591 (1093)
Q Consensus 580 ~~i~~~~~~v~~ 591 (1093)
.++..+..++..
T Consensus 59 ~~~~~~~~Dv~~ 70 (250)
T 3nyw_A 59 QEPIVLPLDITD 70 (250)
T ss_dssp CCCEEEECCTTC
T ss_pred CcceEEeccCCC
Confidence 456666666654
No 161
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=90.32 E-value=1.4 Score=48.61 Aligned_cols=110 Identities=21% Similarity=0.252 Sum_probs=65.6
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeeccc-
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTEL- 187 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l- 187 (1093)
++|.+||+|-.|..+|+||+.+|. .++++|.+.-....+.. .|-..+....+.. -..++-+......-
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l~~--------~Ga~~a~s~~e~~--~~~dvv~~~l~~~~~ 72 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVA--------AGASAARSARDAV--QGADVVISMLPASQH 72 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH--------TTCEECSSHHHHH--TTCSEEEECCSCHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHH--------cCCEEcCCHHHHH--hcCCceeecCCchHH
Confidence 479999999999999999999997 68888754322111110 1111111111111 12233333333221
Q ss_pred chh-------h---hcCCceEEEec-CCHHHHHHHHHHHHhcCCCcceEeeeecc
Q 001356 188 TKE-------K---LSDFQAVVFTD-ISLEKAVEFDDYCHNHQPPIAFIKSEVRG 231 (1093)
Q Consensus 188 ~~~-------~---l~~~dvVV~~~-~~~~~~~~ln~~c~~~~~~ip~I~~~~~G 231 (1093)
.++ . +..=++||++. .+++...++.+.+.++| +-|+.+.+.|
T Consensus 73 v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G--~~~lDaPVsG 125 (300)
T 3obb_A 73 VEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERG--LAMLDAPVSG 125 (300)
T ss_dssp HHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTT--CEEEECCEES
T ss_pred HHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC--CEEEecCCCC
Confidence 011 1 22235777654 58888899999999999 8999887665
No 162
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=90.27 E-value=0.72 Score=50.30 Aligned_cols=32 Identities=22% Similarity=0.352 Sum_probs=28.6
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
++|.|||+|.+|+.++++|+..|. +++++|.+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~------~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF------DVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC------CEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC------eEEEEcCC
Confidence 479999999999999999999997 78888744
No 163
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=90.24 E-value=0.41 Score=53.67 Aligned_cols=36 Identities=14% Similarity=0.394 Sum_probs=31.6
Q ss_pred HHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 502 KLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 502 ~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.|.+++|.|||+|.||..+++.|...|+ +++.+|..
T Consensus 134 ~l~gktvGIiGlG~IG~~vA~~l~~~G~------~V~~~dr~ 169 (324)
T 3evt_A 134 TLTGQQLLIYGTGQIGQSLAAKASALGM------HVIGVNTT 169 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred cccCCeEEEECcCHHHHHHHHHHHhCCC------EEEEECCC
Confidence 4667899999999999999999999998 88888754
No 164
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=90.23 E-value=0.32 Score=54.30 Aligned_cols=35 Identities=29% Similarity=0.392 Sum_probs=30.9
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
|.+++|.|||+|.||..+++.|...|+ +++.+|.+
T Consensus 137 l~g~tvGIiG~G~IG~~vA~~l~~~G~------~V~~~dr~ 171 (315)
T 3pp8_A 137 REEFSVGIMGAGVLGAKVAESLQAWGF------PLRCWSRS 171 (315)
T ss_dssp STTCCEEEECCSHHHHHHHHHHHTTTC------CEEEEESS
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHCCC------EEEEEcCC
Confidence 567899999999999999999999988 88888743
No 165
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=90.09 E-value=0.32 Score=53.33 Aligned_cols=75 Identities=17% Similarity=0.211 Sum_probs=50.6
Q ss_pred HhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhC--C-CcEEE
Q 001356 105 RLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELN--N-AVAIS 181 (1093)
Q Consensus 105 kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLN--p-~V~V~ 181 (1093)
.++.++|+|+|+||+|..+++.|+..| +|+++|.+ ..|++.+++.+.... . .+.+.
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L~~~G--~V~v~~r~-------------------~~~~~~l~~~~~~~~~~~~~~~~d 183 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRT-------------------VEKAEALAKEIAEKLNKKFGEEVK 183 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSS-------------------HHHHHHHHHHHHHHHTCCHHHHEE
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCC--CEEEEECC-------------------HHHHHHHHHHHhhhcccccceeEE
Confidence 356789999999999999999999999 99998742 135566666554421 1 11222
Q ss_pred EeecccchhhhcCCceEEEecC
Q 001356 182 ALTTELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 182 ~~~~~l~~~~l~~~dvVV~~~~ 203 (1093)
+.. + .+.+..+|+||.+..
T Consensus 184 ~~~--~-~~~~~~~DilVn~ag 202 (287)
T 1nvt_A 184 FSG--L-DVDLDGVDIIINATP 202 (287)
T ss_dssp EEC--T-TCCCTTCCEEEECSC
T ss_pred Eee--H-HHhhCCCCEEEECCC
Confidence 221 1 345667888888763
No 166
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.01 E-value=0.41 Score=56.29 Aligned_cols=95 Identities=8% Similarity=0.162 Sum_probs=68.2
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEE
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEA 584 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~ 584 (1093)
.++|+|+|.|-+|..+|+.|-. + .++.+|+.| +.|++.+++. .|+.. .
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~-~------~~v~iIE~d-------------------~~r~~~la~~----l~~~~--V 282 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQ-T------YSVKLIERN-------------------LQRAEKLSEE----LENTI--V 282 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-T------SEEEEEESC-------------------HHHHHHHHHH----CTTSE--E
T ss_pred ccEEEEEcchHHHHHHHHHhhh-c------CceEEEecC-------------------HHHHHHHHHH----CCCce--E
Confidence 5689999999999999999843 2 478888644 3355555543 45543 3
Q ss_pred EecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceE
Q 001356 585 LQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLL 633 (1093)
Q Consensus 585 ~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli 633 (1093)
+..+..+ ..++.++-.+++|++|.++++-++-..+.-++.+++.+-+
T Consensus 283 i~GD~td--~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kv 329 (461)
T 4g65_A 283 FCGDAAD--QELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKV 329 (461)
T ss_dssp EESCTTC--HHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEE
T ss_pred Eeccccc--hhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccc
Confidence 4444332 3456666778999999999999999999988888776643
No 167
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=89.85 E-value=1.4 Score=48.13 Aligned_cols=94 Identities=15% Similarity=0.198 Sum_probs=59.2
Q ss_pred cCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecc
Q 001356 108 ASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTE 186 (1093)
Q Consensus 108 ~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~ 186 (1093)
..+|||.|+ |.+|+.+++.|...|. +|+.++...-... +. .++....+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~-----------------------------~~~~~~~D 50 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN-----------------------------DYEYRVSD 50 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC-----------------------------------CCEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC-----------------------------ceEEEEcc
Confidence 368999995 7799999999999996 6777776411100 11 12222222
Q ss_pred cch----hhhcCCceEEEecC-------------CHHHHHHHHHHHHhcCCCcc-eEeeeecceeE
Q 001356 187 LTK----EKLSDFQAVVFTDI-------------SLEKAVEFDDYCHNHQPPIA-FIKSEVRGLFG 234 (1093)
Q Consensus 187 l~~----~~l~~~dvVV~~~~-------------~~~~~~~ln~~c~~~~~~ip-~I~~~~~G~~G 234 (1093)
++. +.++++|+||.+.. +......+-+.|++.+ ++ ||..++.+.+|
T Consensus 51 l~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~r~v~~SS~~vyg 114 (311)
T 3m2p_A 51 YTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENN--ISNIVYASTISAYS 114 (311)
T ss_dssp CCHHHHHHHTTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGCC
T ss_pred ccHHHHHHhhcCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEccHHHhC
Confidence 221 24556777776532 2334467778899888 55 88888877766
No 168
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=89.84 E-value=0.33 Score=52.26 Aligned_cols=93 Identities=10% Similarity=0.120 Sum_probs=57.5
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEE
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNT 582 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i 582 (1093)
+...+|.|||+|.+|+.+++.|+..|. ..++++|.+. .+++.+++.+ .+.
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~-----~~v~~~~~~~-------------------~~~~~~~~~~-----g~~- 57 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGF-----RIVQVYSRTE-------------------ESARELAQKV-----EAE- 57 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTC-----CEEEEECSSH-------------------HHHHHHHHHT-----TCE-
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCC-----eEEEEEeCCH-------------------HHHHHHHHHc-----CCc-
Confidence 445799999999999999999999997 3377777321 1222222211 122
Q ss_pred EEEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccc--cccceEecc
Q 001356 583 EALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLY--FQKPLLESG 636 (1093)
Q Consensus 583 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~--~~~pli~sg 636 (1093)
... +. .+.++++|+||.|+-+...+..+...... .+..+++..
T Consensus 58 -~~~-----~~-----~~~~~~~Dvvi~av~~~~~~~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 58 -YTT-----DL-----AEVNPYAKLYIVSLKDSAFAELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp -EES-----CG-----GGSCSCCSEEEECCCHHHHHHHHHHHHTTCCTTCEEEECC
T ss_pred -eeC-----CH-----HHHhcCCCEEEEecCHHHHHHHHHHHHhhcCCCcEEEECC
Confidence 111 11 23456899999999887766666554322 345566543
No 169
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.80 E-value=1.2 Score=47.51 Aligned_cols=39 Identities=21% Similarity=0.180 Sum_probs=30.9
Q ss_pred HHHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCc
Q 001356 103 MRRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGV 142 (1093)
Q Consensus 103 q~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~ 142 (1093)
...+...+|.|||+|.+|..+|++|+..|. .|+++|.+.
T Consensus 14 ~~~~~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~~ 52 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRDP 52 (245)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCh
Confidence 347889999999999999999999999996 788888643
No 170
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=89.78 E-value=1.1 Score=50.13 Aligned_cols=72 Identities=18% Similarity=0.236 Sum_probs=52.2
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhC---CCcEEEEee
Q 001356 109 SNILISGMQGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELN---NAVAISALT 184 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLN---p~V~V~~~~ 184 (1093)
.+|.|+|+|.+|..++-.|+..|. .+|.|+|- -..|++..+..|.... +.+++..
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di-------------------~~~~~~g~~~dl~~~~~~~~~~~v~~-- 64 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV-------------------VKDRTKGDALDLEDAQAFTAPKKIYS-- 64 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS-------------------SHHHHHHHHHHHHGGGGGSCCCEEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC-------------------CchHHHHHHHHHHHHHHhcCCeEEEE--
Confidence 689999999999999999998884 57888884 2235665555555543 4455554
Q ss_pred cccchhhhcCCceEEEecC
Q 001356 185 TELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 185 ~~l~~~~l~~~dvVV~~~~ 203 (1093)
. +.+-+++.|+||.+..
T Consensus 65 ~--~~~a~~~aDvVii~ag 81 (318)
T 1ez4_A 65 G--EYSDCKDADLVVITAG 81 (318)
T ss_dssp C--CGGGGTTCSEEEECCC
T ss_pred C--CHHHhCCCCEEEECCC
Confidence 2 2455889999999864
No 171
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=89.75 E-value=0.36 Score=56.85 Aligned_cols=99 Identities=14% Similarity=0.186 Sum_probs=56.8
Q ss_pred HHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 502 KLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 502 ~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
.+..++|+|+|+|++|..++..|+..|- -+|+++|.+ ..|++.+++. +.+.
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g-----~~V~v~~R~-------------------~~ka~~la~~-----~~~~ 70 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDD-----INVTVACRT-------------------LANAQALAKP-----SGSK 70 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTT-----EEEEEEESS-------------------HHHHHHHHGG-----GTCE
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCC-----CeEEEEECC-------------------HHHHHHHHHh-----cCCc
Confidence 4567799999999999999999999843 378888733 1233322221 1222
Q ss_pred EEEEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceEec
Q 001356 582 TEALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLES 635 (1093)
Q Consensus 582 i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~s 635 (1093)
.+...+... +.+ .+.++++|+||+|+-.... ..+...|...++.+++.
T Consensus 71 --~~~~D~~d~-~~l--~~~l~~~DvVIn~tp~~~~-~~v~~a~l~~g~~vvd~ 118 (467)
T 2axq_A 71 --AISLDVTDD-SAL--DKVLADNDVVISLIPYTFH-PNVVKSAIRTKTDVVTS 118 (467)
T ss_dssp --EEECCTTCH-HHH--HHHHHTSSEEEECSCGGGH-HHHHHHHHHHTCEEEEC
T ss_pred --EEEEecCCH-HHH--HHHHcCCCEEEECCchhhh-HHHHHHHHhcCCEEEEe
Confidence 222222211 111 2345688999988865422 23455666666666653
No 172
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.75 E-value=0.42 Score=52.30 Aligned_cols=80 Identities=18% Similarity=0.168 Sum_probs=52.0
Q ss_pred HhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
+.+++++|+| +||+|..+++.|+..|. +++++|.+ ..|++.+++.+... +.+.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~------~V~i~~R~-------------------~~~~~~l~~~~~~~-~~~~ 170 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGA------EVVLCGRK-------------------LDKAQAAADSVNKR-FKVN 170 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESS-------------------HHHHHHHHHHHHHH-HTCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC------EEEEEECC-------------------HHHHHHHHHHHHhc-CCcE
Confidence 5678999999 89999999999999998 48888632 13555555555442 2232
Q ss_pred EEEEecccCccccccchhhhhccCCEEEEccC
Q 001356 582 TEALQIRANPETENVFNDTFWENLNVVVNALD 613 (1093)
Q Consensus 582 i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alD 613 (1093)
+.. ..+... +.+ .+.++.+|+||+|..
T Consensus 171 ~~~--~D~~~~-~~~--~~~~~~~DvlVn~ag 197 (287)
T 1lu9_A 171 VTA--AETADD-ASR--AEAVKGAHFVFTAGA 197 (287)
T ss_dssp CEE--EECCSH-HHH--HHHTTTCSEEEECCC
T ss_pred EEE--ecCCCH-HHH--HHHHHhCCEEEECCC
Confidence 222 223221 111 245677899999874
No 173
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.72 E-value=0.7 Score=51.83 Aligned_cols=36 Identities=19% Similarity=0.339 Sum_probs=30.9
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
....||.|||+|.+|..++..|+..|. ..++++|.|
T Consensus 12 ~~~~kI~ViGaG~vG~~iA~~la~~g~-----~~V~L~Di~ 47 (328)
T 2hjr_A 12 IMRKKISIIGAGQIGSTIALLLGQKDL-----GDVYMFDII 47 (328)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEECC
Confidence 345699999999999999999999998 569999854
No 174
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=89.72 E-value=1 Score=52.76 Aligned_cols=92 Identities=12% Similarity=0.209 Sum_probs=58.7
Q ss_pred cCeEEEEcCChhHHHHHHHHHHh-CC--ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEee
Q 001356 108 ASNILISGMQGLGAEIAKNLILA-GV--KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALT 184 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvla-GV--g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~ 184 (1093)
..+|+|||+||+|+.+|..|++. ++ ..|+++|.+.. ++.. .+.+ .+++....
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~----------------~~~~----~~~~-----g~~~~~~~ 67 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT----------------KVDV----AQQY-----GVSFKLQQ 67 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC----------------SCCH----HHHH-----TCEEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh----------------hhhH----Hhhc-----CCceeEEe
Confidence 46899999999999999999985 45 58999986442 1100 1122 23333322
Q ss_pred ---ccc---chhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEee
Q 001356 185 ---TEL---TKEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKS 227 (1093)
Q Consensus 185 ---~~l---~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~ 227 (1093)
.++ -..++++.|+||.+.... .-..+-++|.+.| +-+|..
T Consensus 68 Vdadnv~~~l~aLl~~~DvVIN~s~~~-~~l~Im~acleaG--v~YlDT 113 (480)
T 2ph5_A 68 ITPQNYLEVIGSTLEENDFLIDVSIGI-SSLALIILCNQKG--ALYINA 113 (480)
T ss_dssp CCTTTHHHHTGGGCCTTCEEEECCSSS-CHHHHHHHHHHHT--CEEEES
T ss_pred ccchhHHHHHHHHhcCCCEEEECCccc-cCHHHHHHHHHcC--CCEEEC
Confidence 111 123555669999766544 3457788999999 655553
No 175
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.69 E-value=1 Score=50.38 Aligned_cols=72 Identities=18% Similarity=0.216 Sum_probs=49.8
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHH----HhCCCcEEEEee
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQ----ELNNAVAISALT 184 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~----eLNp~V~V~~~~ 184 (1093)
.+|.|||+|.+|..++..|+..|...++|+|-+. .|++..+..+. .+....++....
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~-------------------~~l~~~~~~l~~~~~~~~~~~~i~~t~ 65 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK-------------------NMPHGKALDTSHTNVMAYSNCKVSGSN 65 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHTHHHHHTCCCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHHHHhhhhhcCCCcEEEECC
Confidence 5899999999999999999999984599998532 12222222332 334455666533
Q ss_pred cccchhhhcCCceEEEec
Q 001356 185 TELTKEKLSDFQAVVFTD 202 (1093)
Q Consensus 185 ~~l~~~~l~~~dvVV~~~ 202 (1093)
+ . +-+++.|+||.+.
T Consensus 66 d-~--~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 66 T-Y--DDLAGADVVIVTA 80 (322)
T ss_dssp C-G--GGGTTCSEEEECC
T ss_pred C-H--HHhCCCCEEEEeC
Confidence 2 2 4578999999985
No 176
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.62 E-value=0.21 Score=54.47 Aligned_cols=33 Identities=27% Similarity=0.323 Sum_probs=30.9
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
.++|+|+|+||.|..++..|...| .+|+|++.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 789999999999999999999999 999999764
No 177
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=89.50 E-value=0.28 Score=52.76 Aligned_cols=63 Identities=16% Similarity=0.257 Sum_probs=44.8
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHL 580 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~ 580 (1093)
.+.+++|+|.|+ ||||.++++.|+..|. +++++|.+ ..+.+.+.+.+....+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~~~~~~~-- 78 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGA------RVVLTARD-------------------VEKLRAVEREIVAAGG-- 78 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHHTTC--
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEECC-------------------HHHHHHHHHHHHHhCC--
Confidence 467788999985 9999999999999997 78888743 2344455555655443
Q ss_pred EEEEEecccCc
Q 001356 581 NTEALQIRANP 591 (1093)
Q Consensus 581 ~i~~~~~~v~~ 591 (1093)
++..+..++..
T Consensus 79 ~~~~~~~D~~~ 89 (262)
T 3rkr_A 79 EAESHACDLSH 89 (262)
T ss_dssp EEEEEECCTTC
T ss_pred ceeEEEecCCC
Confidence 56666666653
No 178
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.47 E-value=0.2 Score=50.82 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=30.8
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHc-ccccCCCcceEEecCC
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALM-GVSCGNQGKLTITDDD 543 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~-Gv~~~~~g~i~liD~D 543 (1093)
+.+.+|+|+|+|.+|..+++.|... |. +++++|.|
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~------~V~vid~~ 72 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK------ISLGIEIR 72 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS------CEEEEESC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC------eEEEEECC
Confidence 3467899999999999999999999 87 89999854
No 179
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=89.44 E-value=0.44 Score=53.02 Aligned_cols=64 Identities=19% Similarity=0.260 Sum_probs=46.1
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
+.+++|+|.|+ ||||.++++.|+..|. +++++|.+ ..|.+.+++.+....+..+
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~------~Vv~~~r~-------------------~~~~~~~~~~l~~~~~~~~ 60 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC------KVAIADIR-------------------QDSIDKALATLEAEGSGPE 60 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHHHTCGGG
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC------EEEEEECC-------------------HHHHHHHHHHHHhcCCCCe
Confidence 45678999995 9999999999999997 78888743 2344555556666555556
Q ss_pred EEEEecccCc
Q 001356 582 TEALQIRANP 591 (1093)
Q Consensus 582 i~~~~~~v~~ 591 (1093)
+..+..++..
T Consensus 61 ~~~~~~Dl~~ 70 (319)
T 3ioy_A 61 VMGVQLDVAS 70 (319)
T ss_dssp EEEEECCTTC
T ss_pred EEEEECCCCC
Confidence 6666666654
No 180
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=89.42 E-value=0.44 Score=52.00 Aligned_cols=32 Identities=31% Similarity=0.454 Sum_probs=28.8
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
++|.|||+|.+|+.++++|+..|. +++++|.+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~------~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC------SVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC------eEEEEcCC
Confidence 589999999999999999999997 78888754
No 181
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=89.36 E-value=0.65 Score=51.62 Aligned_cols=36 Identities=19% Similarity=0.526 Sum_probs=28.6
Q ss_pred HHHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 501 KKLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 501 ~~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
..+..++|+|.|+ |.||..+++.|+..|. +++++|.
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r 59 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGH------EVTVVDN 59 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEEC
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCC------EEEEEeC
Confidence 4567789999997 9999999999999986 7888764
No 182
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=89.35 E-value=0.63 Score=49.47 Aligned_cols=84 Identities=19% Similarity=0.281 Sum_probs=53.4
Q ss_pred HhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
+++++|+|.| .||||.++++.|+..|. .+++++|.+. + + ...+.+.+..+..+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~-----~~v~~~~r~~---------------~----~--~~~~~l~~~~~~~~ 56 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNL-----KNFVILDRVE---------------N----P--TALAELKAINPKVN 56 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCC-----SEEEEEESSC---------------C----H--HHHHHHHHHCTTSE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-----cEEEEEecCc---------------h----H--HHHHHHHHhCCCce
Confidence 4567899998 58999999999999997 4488876321 0 0 12234455556667
Q ss_pred EEEEecccCcc-cc--ccch--hhhhccCCEEEEcc
Q 001356 582 TEALQIRANPE-TE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 582 i~~~~~~v~~~-~~--~~~~--~~f~~~~DvVi~al 612 (1093)
+..+..++.+. .. ..+. .+-+...|+||++.
T Consensus 57 ~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~A 92 (254)
T 1sby_A 57 ITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGA 92 (254)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECC
Confidence 77777777643 21 1111 01234788888764
No 183
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=89.32 E-value=0.93 Score=50.12 Aligned_cols=36 Identities=25% Similarity=0.302 Sum_probs=30.1
Q ss_pred HhhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 105 RLFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 105 kL~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
.+.+.+|||.|+ |++|.++++.|+..|. +|+++|..
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~ 53 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNF 53 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 455678999997 7899999999999995 78888763
No 184
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.31 E-value=0.7 Score=50.53 Aligned_cols=34 Identities=18% Similarity=0.176 Sum_probs=30.8
Q ss_pred hhcCeEEEEc-CChhHHHHHHHHHHhCCceEEEEeC
Q 001356 106 LFASNILISG-MQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 106 L~~s~VlIiG-~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
++.++|+|.| .||+|..+++.|+..|.. |+++|.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R 151 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGR 151 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEEC
Confidence 5678999999 999999999999999986 988875
No 185
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=89.31 E-value=0.55 Score=51.24 Aligned_cols=31 Identities=23% Similarity=0.619 Sum_probs=27.3
Q ss_pred CcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 506 AKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 506 ~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
++|+|.|+ |.||..+++.|+..|. +++++|.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY------EVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC------EEEEEeC
Confidence 47999997 9999999999999987 7888874
No 186
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=89.20 E-value=0.69 Score=48.63 Aligned_cols=102 Identities=14% Similarity=0.114 Sum_probs=58.9
Q ss_pred HhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
...++|+|.| .|+||.++++.|+..|- -++++++.+.-....+ . . -.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~-----~~V~~~~R~~~~~~~~-----~--------------------~--~~ 68 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQT-----IKQTLFARQPAKIHKP-----Y--------------------P--TN 68 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTT-----EEEEEEESSGGGSCSS-----C--------------------C--TT
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCC-----ceEEEEEcChhhhccc-----c--------------------c--CC
Confidence 3456899999 59999999999999982 2788877543211110 0 0 13
Q ss_pred EEEEecccCccccccchhhhhccCCEEEEccCCHH----HHHHHhhcccccccc-eEeccccCc
Q 001356 582 TEALQIRANPETENVFNDTFWENLNVVVNALDNVN----ARLYIDQRCLYFQKP-LLESGTLGA 640 (1093)
Q Consensus 582 i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~----aR~~i~~~c~~~~~p-li~sgt~G~ 640 (1093)
++.+..++.+.. .+ ...++++|+||++..... ++ .+-..|...+.. +|..++.+.
T Consensus 69 ~~~~~~Dl~d~~-~~--~~~~~~~D~vv~~a~~~~~~~~~~-~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 69 SQIIMGDVLNHA-AL--KQAMQGQDIVYANLTGEDLDIQAN-SVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp EEEEECCTTCHH-HH--HHHHTTCSEEEEECCSTTHHHHHH-HHHHHHHHTTCCEEEEECCCCC
T ss_pred cEEEEecCCCHH-HH--HHHhcCCCEEEEcCCCCchhHHHH-HHHHHHHHcCCCEEEEEeccee
Confidence 555666665321 12 356788999997765432 22 233344444443 555444443
No 187
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=89.18 E-value=0.89 Score=47.59 Aligned_cols=38 Identities=29% Similarity=0.552 Sum_probs=30.9
Q ss_pred HHhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 502 KLEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 502 ~L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.+.+++|+|.| .|+||.++++.|+..|.. .+++++|.+
T Consensus 15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~----~~V~~~~r~ 53 (242)
T 2bka_A 15 RMQNKSVFILGASGETGRVLLKEILEQGLF----SKVTLIGRR 53 (242)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCC----SEEEEEESS
T ss_pred hhcCCeEEEECCCcHHHHHHHHHHHcCCCC----CEEEEEEcC
Confidence 36678999999 599999999999999850 278888754
No 188
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=89.15 E-value=0.45 Score=51.94 Aligned_cols=31 Identities=35% Similarity=0.404 Sum_probs=27.5
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.+|.|||+|.+|+.+++.|+..|. +++++|.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~------~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGY------PLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTC------CEEEECS
T ss_pred CeEEEEeccHHHHHHHHHHHHCCC------EEEEEeC
Confidence 379999999999999999999987 7888874
No 189
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=89.13 E-value=0.55 Score=48.70 Aligned_cols=75 Identities=9% Similarity=0.137 Sum_probs=47.8
Q ss_pred CcEEEEcc-CcchHHHHHHHH-HcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEE
Q 001356 506 AKVFVVGS-GALGCEFLKNLA-LMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTE 583 (1093)
Q Consensus 506 ~~VlivG~-GgiG~e~lknLa-~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~ 583 (1093)
++|+|.|+ |+||.++++.|+ ..|. ++++++.+.-+ |.. .+....+ .++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~------~V~~~~r~~~~------------------~~~----~~~~~~~--~~~ 55 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM------HITLYGRQLKT------------------RIP----PEIIDHE--RVT 55 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC------EEEEEESSHHH------------------HSC----HHHHTST--TEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc------eEEEEecCccc------------------cch----hhccCCC--ceE
Confidence 35999995 999999999999 8887 78887643110 100 0111223 455
Q ss_pred EEecccCccccccchhhhhccCCEEEEccC
Q 001356 584 ALQIRANPETENVFNDTFWENLNVVVNALD 613 (1093)
Q Consensus 584 ~~~~~v~~~~~~~~~~~f~~~~DvVi~alD 613 (1093)
.+..++.+.. .+ ...++++|+||++..
T Consensus 56 ~~~~D~~d~~-~~--~~~~~~~d~vv~~ag 82 (221)
T 3r6d_A 56 VIEGSFQNPG-XL--EQAVTNAEVVFVGAM 82 (221)
T ss_dssp EEECCTTCHH-HH--HHHHTTCSEEEESCC
T ss_pred EEECCCCCHH-HH--HHHHcCCCEEEEcCC
Confidence 6666665322 12 346688999998875
No 190
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=89.12 E-value=0.74 Score=50.71 Aligned_cols=32 Identities=34% Similarity=0.581 Sum_probs=29.0
Q ss_pred CcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 506 AKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 506 ~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.+|.||| +|.+|+.+++.|+..|. +++++|.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC------eEEEEECC
Confidence 5899999 99999999999999997 78888854
No 191
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=89.09 E-value=0.78 Score=51.11 Aligned_cols=101 Identities=11% Similarity=0.079 Sum_probs=59.4
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
+..++|+|.|+ |.||..+++.|+..|. ++++++.+. .-...|...+ +.+.. + .
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~------~V~~l~R~~---------------~~~~~~~~~~-~~l~~--~--~ 61 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHR------PTYILARPG---------------PRSPSKAKIF-KALED--K--G 61 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTC------CEEEEECSS---------------CCCHHHHHHH-HHHHH--T--T
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCC------CEEEEECCC---------------CCChhHHHHH-HHHHh--C--C
Confidence 34579999998 9999999999999986 677776332 0011222221 11221 2 3
Q ss_pred EEEEecccCccccccchhhhhc--cCCEEEEccC--CHHHHHHHhhcccccc-cce
Q 001356 582 TEALQIRANPETENVFNDTFWE--NLNVVVNALD--NVNARLYIDQRCLYFQ-KPL 632 (1093)
Q Consensus 582 i~~~~~~v~~~~~~~~~~~f~~--~~DvVi~alD--n~~aR~~i~~~c~~~~-~pl 632 (1093)
++.+..++.+. +.+ ...++ ++|+||.+.. |+..-..+-+.|...+ ++.
T Consensus 62 v~~~~~Dl~d~-~~l--~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~ 114 (346)
T 3i6i_A 62 AIIVYGLINEQ-EAM--EKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKR 114 (346)
T ss_dssp CEEEECCTTCH-HHH--HHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSE
T ss_pred cEEEEeecCCH-HHH--HHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceE
Confidence 44555566532 222 34567 8999998875 4555455556666655 443
No 192
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=89.04 E-value=1.6 Score=48.90 Aligned_cols=100 Identities=12% Similarity=0.136 Sum_probs=62.1
Q ss_pred hhcCeEEEEcC-ChhHHHHHHHHHHh-CCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEe
Q 001356 106 LFASNILISGM-QGLGAEIAKNLILA-GVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISAL 183 (1093)
Q Consensus 106 L~~s~VlIiG~-gglGseiaKnLvla-GVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~ 183 (1093)
++.++|||.|+ |++|.++++.|+.. |..+|++++.+. .+...+.+.+ . ...+..+
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~-------------------~~~~~~~~~~---~-~~~v~~~ 75 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDE-------------------LKQSEMAMEF---N-DPRMRFF 75 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCH-------------------HHHHHHHHHH---C-CTTEEEE
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECCh-------------------hhHHHHHHHh---c-CCCEEEE
Confidence 45678999995 78999999999999 988898887532 1233232222 2 2345555
Q ss_pred ecccch-----hhhcCCceEEEecC--C-------HH--------HHHHHHHHHHhcCCCcceEeeee
Q 001356 184 TTELTK-----EKLSDFQAVVFTDI--S-------LE--------KAVEFDDYCHNHQPPIAFIKSEV 229 (1093)
Q Consensus 184 ~~~l~~-----~~l~~~dvVV~~~~--~-------~~--------~~~~ln~~c~~~~~~ip~I~~~~ 229 (1093)
..++.+ +.++++|+||.+.. . .. ....+-+.|++.+. ..+|..++
T Consensus 76 ~~Dl~d~~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v-~~~V~~SS 142 (344)
T 2gn4_A 76 IGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAI-SQVIALST 142 (344)
T ss_dssp ECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTC-SEEEEECC
T ss_pred ECCCCCHHHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCC-CEEEEecC
Confidence 555532 35678899997653 1 11 11345567777762 14555554
No 193
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.01 E-value=1.6 Score=46.93 Aligned_cols=97 Identities=9% Similarity=0.045 Sum_probs=63.2
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeeccc
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTEL 187 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l 187 (1093)
..+|+|.|+|.+|+.+++.|...|. +|+.++.+. .++. .+.. + .++.+..++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~----~~~~--~--~~~~~~~D~ 56 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNP-------------------DQME----AIRA--S--GAEPLLWPG 56 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCG-------------------GGHH----HHHH--T--TEEEEESSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcCh-------------------hhhh----hHhh--C--CCeEEEecc
Confidence 3689999999999999999999986 566665421 1111 2222 2 244444444
Q ss_pred ch-hhhcCCceEEEecCC----HHHHHHHHHHHHh--cCCCcceEeeeecceeE
Q 001356 188 TK-EKLSDFQAVVFTDIS----LEKAVEFDDYCHN--HQPPIAFIKSEVRGLFG 234 (1093)
Q Consensus 188 ~~-~~l~~~dvVV~~~~~----~~~~~~ln~~c~~--~~~~ip~I~~~~~G~~G 234 (1093)
++ + +.++|+||.+... ......+-+.|++ .+. ..||..++.+.+|
T Consensus 57 ~d~~-~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~-~~~v~~Ss~~vyg 108 (286)
T 3ius_A 57 EEPS-LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQF-RWVGYLSTTAVYG 108 (286)
T ss_dssp SCCC-CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGC-SEEEEEEEGGGGC
T ss_pred cccc-cCCCCEEEECCCccccccHHHHHHHHHHHhhcCCc-eEEEEeecceecC
Confidence 32 2 7789999987532 2334566777877 442 3688888888776
No 194
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=88.92 E-value=0.81 Score=48.92 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=29.0
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+.+++|+|.|+ ||||.++++.|+..|. +++++|.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r 39 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGA------RLLLFSR 39 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEeC
Confidence 45678999985 8999999999999997 7888874
No 195
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=88.91 E-value=0.53 Score=52.65 Aligned_cols=35 Identities=20% Similarity=0.372 Sum_probs=31.1
Q ss_pred hcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 504 EEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 504 ~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
...||.|||+|.+|+.++..|+..|+ ++|+++|-+
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~-----~~v~l~Di~ 38 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQL-----GDVVLFDIA 38 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-----ceEEEEeCC
Confidence 35799999999999999999999998 689999854
No 196
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=88.88 E-value=0.4 Score=52.38 Aligned_cols=37 Identities=22% Similarity=0.426 Sum_probs=30.0
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCc
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDV 544 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~ 544 (1093)
.++.++|+|.|+ |.||+.+++.|+..|. +++++|...
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~ 41 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGE------EVTVLDDLR 41 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC------CEEEECCCS
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCC------EEEEEecCC
Confidence 356789999997 9999999999999997 788887543
No 197
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=88.87 E-value=0.58 Score=52.47 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=29.6
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHH--cccccCCCcceEEecCC
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLAL--MGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~--~Gv~~~~~g~i~liD~D 543 (1093)
+..++|+|.|+ |+||..+++.|+. .|. +++++|..
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~------~V~~~~r~ 45 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKA------KVVVLDKF 45 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTS------EEEEEECC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCC------eEEEEECC
Confidence 45689999984 9999999999999 776 88888753
No 198
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=88.81 E-value=0.5 Score=53.41 Aligned_cols=77 Identities=16% Similarity=0.216 Sum_probs=52.3
Q ss_pred hhcCeEEEEcC-ChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHh-CCCcEEEE
Q 001356 106 LFASNILISGM-QGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQEL-NNAVAISA 182 (1093)
Q Consensus 106 L~~s~VlIiG~-gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eL-Np~V~V~~ 182 (1093)
|...+|.|||+ |.+|+.+|-.|+..|. .+|+|+|-+ +.|++..+.-|+.. .|...+..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~-------------------~~k~~g~a~DL~~~~~~~~~i~~ 66 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF-------------------AVGLEGVAEEIRHCGFEGLNLTF 66 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC-------------------HHHHHHHHHHHHHHCCTTCCCEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC-------------------chhHHHHHHhhhhCcCCCCceEE
Confidence 45679999998 9999999999999997 689999842 23555544445543 23333432
Q ss_pred eecccchhhhcCCceEEEecC
Q 001356 183 LTTELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 183 ~~~~l~~~~l~~~dvVV~~~~ 203 (1093)
. .+. .+-+++.|+||.|..
T Consensus 67 t-~d~-~~al~dADvVvitaG 85 (343)
T 3fi9_A 67 T-SDI-KEALTDAKYIVSSGG 85 (343)
T ss_dssp E-SCH-HHHHTTEEEEEECCC
T ss_pred c-CCH-HHHhCCCCEEEEccC
Confidence 2 111 245789999998854
No 199
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=88.75 E-value=1.2 Score=48.24 Aligned_cols=87 Identities=14% Similarity=0.076 Sum_probs=54.2
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEEE
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEAL 585 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~~ 585 (1093)
.+|.|||+|.+|+.+++.|+. |. +++++|.+. .|++.+++. .+.+ .
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~------~V~~~~~~~-------------------~~~~~~~~~------g~~~--~ 47 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF------PTLVWNRTF-------------------EKALRHQEE------FGSE--A 47 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS------CEEEECSST-------------------HHHHHHHHH------HCCE--E
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC------eEEEEeCCH-------------------HHHHHHHHC------CCcc--c
Confidence 479999999999999999999 87 688887321 122222221 1111 1
Q ss_pred ecccCccccccchhhhhccCCEEEEccCCHH-HHHHHhhcc--cccccceEeccc
Q 001356 586 QIRANPETENVFNDTFWENLNVVVNALDNVN-ARLYIDQRC--LYFQKPLLESGT 637 (1093)
Q Consensus 586 ~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~-aR~~i~~~c--~~~~~pli~sgt 637 (1093)
. ..+.+.++|+||.|+-+.. .+..+.... ...+..+++.++
T Consensus 48 ~-----------~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~l~~~~~vv~~s~ 91 (289)
T 2cvz_A 48 V-----------PLERVAEARVIFTCLPTTREVYEVAEALYPYLREGTYWVDATS 91 (289)
T ss_dssp C-----------CGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCCTTEEEEECSC
T ss_pred C-----------HHHHHhCCCEEEEeCCChHHHHHHHHHHHhhCCCCCEEEECCC
Confidence 0 1234568999999998775 555554432 233556665443
No 200
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=88.69 E-value=1.1 Score=50.08 Aligned_cols=39 Identities=21% Similarity=0.249 Sum_probs=28.1
Q ss_pred HHHhhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 103 MRRLFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 103 q~kL~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
+..+...+|||.|+ |++|..+++.|+..|...+++++..
T Consensus 41 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 41 GSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence 34466678999997 7799999999999996678888754
No 201
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=88.68 E-value=1.7 Score=48.39 Aligned_cols=110 Identities=10% Similarity=0.074 Sum_probs=64.9
Q ss_pred hhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHh-CCCcEEEEe
Q 001356 106 LFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQEL-NNAVAISAL 183 (1093)
Q Consensus 106 L~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eL-Np~V~V~~~ 183 (1093)
+...+|||.|+ |++|..+++.|+..|. +|+++|...-. ...+...+.+.+... .+ .++.+
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---------------~~~~~~~~~~~~~~~~~~--~~~~~ 86 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATG---------------HQRNLDEVRSLVSEKQWS--NFKFI 86 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC---------------CHHHHHHHHHHSCHHHHT--TEEEE
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCcc---------------chhhHHHHhhhcccccCC--ceEEE
Confidence 55678999997 7799999999999995 67777652210 011222222222111 12 34455
Q ss_pred ecccch-----hhhcCCceEEEecCC---------H--------HHHHHHHHHHHhcCCCcceEeeeecceeE
Q 001356 184 TTELTK-----EKLSDFQAVVFTDIS---------L--------EKAVEFDDYCHNHQPPIAFIKSEVRGLFG 234 (1093)
Q Consensus 184 ~~~l~~-----~~l~~~dvVV~~~~~---------~--------~~~~~ln~~c~~~~~~ip~I~~~~~G~~G 234 (1093)
..++++ +.++++|+||.+... . .....+-+.|++.+. ..||..++.+.+|
T Consensus 87 ~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~v~~SS~~~~~ 158 (352)
T 1sb8_A 87 QGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKV-QSFTYAASSSTYG 158 (352)
T ss_dssp ECCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-SEEEEEEEGGGGT
T ss_pred ECCCCCHHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC-CEEEEeccHHhcC
Confidence 555532 356789999976541 1 112445577887772 2578777776654
No 202
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.68 E-value=1.3 Score=47.84 Aligned_cols=32 Identities=22% Similarity=0.096 Sum_probs=29.2
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEEeCCc
Q 001356 110 NILISGMQGLGAEIAKNLILAGVKSVTLHDEGV 142 (1093)
Q Consensus 110 ~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~ 142 (1093)
+|+|||+|.+|+.+|..|...|. .++++|.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCc
Confidence 79999999999999999999996 899998754
No 203
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=88.64 E-value=1.1 Score=49.80 Aligned_cols=72 Identities=15% Similarity=0.165 Sum_probs=50.4
Q ss_pred eEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHh----CCCcEEEEee
Q 001356 110 NILISGMQGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQEL----NNAVAISALT 184 (1093)
Q Consensus 110 ~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eL----Np~V~V~~~~ 184 (1093)
+|.|+|+|.+|+.+|..|+..|+ ..++|+|-+. .|++..+..|+.. ...+++....
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~-------------------~k~~g~a~DL~~~~~~~~~~~~v~~~~ 62 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD-------------------GMPQGKALDMRESSPIHGFDTRVTGTN 62 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch-------------------HHHHHHHHHHhccccccCCCcEEEECC
Confidence 79999999999999999999997 5899998532 2344434444443 2345565331
Q ss_pred cccchhhhcCCceEEEecC
Q 001356 185 TELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 185 ~~l~~~~l~~~dvVV~~~~ 203 (1093)
+.+-+++.|+||.+..
T Consensus 63 ---~~~a~~~aDvVii~ag 78 (314)
T 3nep_X 63 ---DYGPTEDSDVCIITAG 78 (314)
T ss_dssp ---SSGGGTTCSEEEECCC
T ss_pred ---CHHHhCCCCEEEECCC
Confidence 2456789999998864
No 204
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=88.63 E-value=1.2 Score=49.90 Aligned_cols=74 Identities=18% Similarity=0.229 Sum_probs=52.4
Q ss_pred hcCeEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhC---CCcEEEE
Q 001356 107 FASNILISGMQGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELN---NAVAISA 182 (1093)
Q Consensus 107 ~~s~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLN---p~V~V~~ 182 (1093)
...+|.|+|+|.+|..++-.|+..|. .+|.|+|- -..|++..+..|.+.. ..+++..
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di-------------------~~~~~~g~~~dl~~~~~~~~~~~i~~ 68 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI-------------------FKDKTKGDAIDLSNALPFTSPKKIYS 68 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS-------------------CHHHHHHHHHHHHTTGGGSCCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC-------------------CchHhHHHHHHHHHHHHhcCCeEEEE
Confidence 34689999999999999999998884 57888884 1235555455555443 4455554
Q ss_pred eecccchhhhcCCceEEEecC
Q 001356 183 LTTELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 183 ~~~~l~~~~l~~~dvVV~~~~ 203 (1093)
. +.+-+++.|+||.+..
T Consensus 69 --~--~~~a~~~aDvVii~ag 85 (326)
T 2zqz_A 69 --A--EYSDAKDADLVVITAG 85 (326)
T ss_dssp --C--CGGGGGGCSEEEECCC
T ss_pred --C--CHHHhCCCCEEEEcCC
Confidence 2 2455889999998864
No 205
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=88.62 E-value=4.1 Score=46.61 Aligned_cols=106 Identities=8% Similarity=0.107 Sum_probs=69.0
Q ss_pred HHhhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCC--CcEE
Q 001356 104 RRLFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNN--AVAI 180 (1093)
Q Consensus 104 ~kL~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp--~V~V 180 (1093)
..++.++|||.|+ |++|+++++.|+..|...++++|.. .++.....+.|.+..+ ...+
T Consensus 31 ~~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~v 91 (399)
T 3nzo_A 31 SVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDIS-------------------ENNMVELVRDIRSSFGYINGDF 91 (399)
T ss_dssp HHHHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSC-------------------HHHHHHHHHHHHHHTCCCSSEE
T ss_pred HHhCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECC-------------------cchHHHHHHHHHHhcCCCCCcE
Confidence 3477899999995 6699999999999998889988742 2344455556666554 2467
Q ss_pred EEeecccch-h----hh--cCCceEEEecC--------CH-----------HHHHHHHHHHHhcCCCcceEeeee
Q 001356 181 SALTTELTK-E----KL--SDFQAVVFTDI--------SL-----------EKAVEFDDYCHNHQPPIAFIKSEV 229 (1093)
Q Consensus 181 ~~~~~~l~~-~----~l--~~~dvVV~~~~--------~~-----------~~~~~ln~~c~~~~~~ip~I~~~~ 229 (1093)
..+..++++ + .+ .+.|+||.+.. +. .....+-+.|++++. ..||..++
T Consensus 92 ~~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv-~r~V~iSS 165 (399)
T 3nzo_A 92 QTFALDIGSIEYDAFIKADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGA-KKYFCVST 165 (399)
T ss_dssp EEECCCTTSHHHHHHHHHCCCCSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTC-SEEEEECC
T ss_pred EEEEEeCCCHHHHHHHHHhCCCCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCC-CEEEEEeC
Confidence 777666643 1 22 47899886542 11 112356678888872 14555444
No 206
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.61 E-value=0.21 Score=54.69 Aligned_cols=35 Identities=14% Similarity=0.410 Sum_probs=29.7
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
..+|.|||+|.+|+.+++.|+..|. +..+++++|.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~---~~~~V~v~dr 37 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGY---DPNRICVTNR 37 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTC---CGGGEEEECS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCC---CCCeEEEEeC
Confidence 5789999999999999999999986 1257888874
No 207
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=88.52 E-value=0.61 Score=49.26 Aligned_cols=36 Identities=17% Similarity=0.319 Sum_probs=30.7
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.+++++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~------~V~~~~r~ 47 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGA------SVVLLGRT 47 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEecC
Confidence 467788999985 9999999999999997 78888743
No 208
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=88.47 E-value=0.76 Score=50.52 Aligned_cols=83 Identities=16% Similarity=0.214 Sum_probs=52.5
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
+.+++|+|.|+ ||||.++++.|+..|. +++++|.+ ..+.+.+++.+.... .+
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~--~~ 81 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA------RLVLSDVD-------------------QPALEQAVNGLRGQG--FD 81 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHHTT--CC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEECC-------------------HHHHHHHHHHHHhcC--Cc
Confidence 56789999995 8999999999999997 78887643 234444555555543 34
Q ss_pred EEEEecccCcccc--ccch--hhhhccCCEEEEcc
Q 001356 582 TEALQIRANPETE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 582 i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~al 612 (1093)
+..+..++.+... ..+. .+.+...|+||++.
T Consensus 82 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnA 116 (301)
T 3tjr_A 82 AHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNA 116 (301)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECC
T ss_pred eEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 5566666654221 1111 01134678888764
No 209
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=88.45 E-value=0.74 Score=53.92 Aligned_cols=96 Identities=15% Similarity=0.216 Sum_probs=0.0
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE-
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN- 581 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~- 581 (1093)
+..++|+|+|+|++|..+++.|+..|. +++++| +. .+++.++-..+.
T Consensus 1 M~~k~VlViGaG~iG~~ia~~L~~~G~------~V~v~~---------------R~-----------~~~a~~la~~~~~ 48 (450)
T 1ff9_A 1 MATKSVLMLGSGFVTRPTLDVLTDSGI------KVTVAC---------------RT-----------LESAKKLSAGVQH 48 (450)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHTTTC------EEEEEE---------------SS-----------HHHHHHTTTTCTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcC------EEEEEE---------------CC-----------HHHHHHHHHhcCC
Q ss_pred EEEEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceEe
Q 001356 582 TEALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLE 634 (1093)
Q Consensus 582 i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~ 634 (1093)
+..+..++.+...-. +.+++.|+||+|+-...... +...|...++.+++
T Consensus 49 ~~~~~~Dv~d~~~l~---~~l~~~DvVIn~a~~~~~~~-i~~a~l~~g~~vvd 97 (450)
T 1ff9_A 49 STPISLDVNDDAALD---AEVAKHDLVISLIPYTFHAT-VIKSAIRQKKHVVT 97 (450)
T ss_dssp EEEEECCTTCHHHHH---HHHTTSSEEEECCC--CHHH-HHHHHHHHTCEEEE
T ss_pred ceEEEeecCCHHHHH---HHHcCCcEEEECCccccchH-HHHHHHhCCCeEEE
No 210
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=88.45 E-value=1.1 Score=49.96 Aligned_cols=72 Identities=25% Similarity=0.244 Sum_probs=52.0
Q ss_pred CeEEEEcCChhHHHHHHHHHHhC-CceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhC---CCcEEEEee
Q 001356 109 SNILISGMQGLGAEIAKNLILAG-VKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELN---NAVAISALT 184 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaG-Vg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLN---p~V~V~~~~ 184 (1093)
.+|.|+|+|.+|..++-.|+..| +++|.|+|-+ ..|++..+..|.+.. ..+++..
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~k~~g~a~dl~~~~~~~~~~~v~~-- 59 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLD-------------------RKLAQAHAEDILHATPFAHPVWVWA-- 59 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS-------------------HHHHHHHHHHHHTTGGGSCCCEEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC-------------------hhHHHHHHHHHHHhHhhcCCeEEEE--
Confidence 37999999999999999999887 4679998852 235555555565543 3556664
Q ss_pred cccchhhhcCCceEEEecC
Q 001356 185 TELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 185 ~~l~~~~l~~~dvVV~~~~ 203 (1093)
. +.+-+++.|+||.+..
T Consensus 60 ~--~~~a~~~aD~Vii~ag 76 (310)
T 2xxj_A 60 G--SYGDLEGARAVVLAAG 76 (310)
T ss_dssp C--CGGGGTTEEEEEECCC
T ss_pred C--CHHHhCCCCEEEECCC
Confidence 2 3456889999998764
No 211
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=88.39 E-value=1.3 Score=45.70 Aligned_cols=98 Identities=11% Similarity=0.155 Sum_probs=60.6
Q ss_pred CeEEEEc-CChhHHHHHHHHH-HhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecc
Q 001356 109 SNILISG-MQGLGAEIAKNLI-LAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTE 186 (1093)
Q Consensus 109 s~VlIiG-~gglGseiaKnLv-laGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~ 186 (1093)
++|+|.| .|++|.++++.|+ ..|. ++++++.+.-+ ++ +.+.+..+ .+.....+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~------------------~~----~~~~~~~~--~~~~~~~D 60 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKT------------------RI----PPEIIDHE--RVTVIEGS 60 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHH------------------HS----CHHHHTST--TEEEEECC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccc------------------cc----hhhccCCC--ceEEEECC
Confidence 4599999 4889999999999 8887 67777653210 11 11212233 34445555
Q ss_pred cch-----hhhcCCceEEEecC--CHHHHHHHHHHHHhcCCCcceEeeeeccee
Q 001356 187 LTK-----EKLSDFQAVVFTDI--SLEKAVEFDDYCHNHQPPIAFIKSEVRGLF 233 (1093)
Q Consensus 187 l~~-----~~l~~~dvVV~~~~--~~~~~~~ln~~c~~~~~~ip~I~~~~~G~~ 233 (1093)
+++ +.++++|+||.+.. +.. ...+-+.|++.+. ..+|..++.+.+
T Consensus 61 ~~d~~~~~~~~~~~d~vv~~ag~~n~~-~~~~~~~~~~~~~-~~iv~iSs~~~~ 112 (221)
T 3r6d_A 61 FQNPGXLEQAVTNAEVVFVGAMESGSD-MASIVKALSRXNI-RRVIGVSMAGLS 112 (221)
T ss_dssp TTCHHHHHHHHTTCSEEEESCCCCHHH-HHHHHHHHHHTTC-CEEEEEEETTTT
T ss_pred CCCHHHHHHHHcCCCEEEEcCCCCChh-HHHHHHHHHhcCC-CeEEEEeeceec
Confidence 532 35678899998764 344 5566677777772 146665555543
No 212
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=88.30 E-value=1.7 Score=48.64 Aligned_cols=113 Identities=14% Similarity=0.188 Sum_probs=62.5
Q ss_pred hhcCeEEEEcC-ChhHHHHHHHHHH--hCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEE
Q 001356 106 LFASNILISGM-QGLGAEIAKNLIL--AGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISA 182 (1093)
Q Consensus 106 L~~s~VlIiG~-gglGseiaKnLvl--aGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~ 182 (1093)
+...+|||.|+ |++|.++++.|+. .|. +|+++|...-...-..+ ..+.++.. ..+. ...+..
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~----~~~~~~~~---------~~~~-~~~~~~ 72 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRSNTLFSNN----RPSSLGHF---------KNLI-GFKGEV 72 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCCC-----------CCCCCCG---------GGGT-TCCSEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCcccccccc----chhhhhhh---------hhcc-ccCceE
Confidence 55789999975 7799999999999 776 67777653210000000 00001110 0111 112333
Q ss_pred eecccch-----hh-hcCCceEEEecC-------CH--------HHHHHHHHHHHhcCCCcceEeeeecceeEE
Q 001356 183 LTTELTK-----EK-LSDFQAVVFTDI-------SL--------EKAVEFDDYCHNHQPPIAFIKSEVRGLFGN 235 (1093)
Q Consensus 183 ~~~~l~~-----~~-l~~~dvVV~~~~-------~~--------~~~~~ln~~c~~~~~~ip~I~~~~~G~~G~ 235 (1093)
+..++++ +. ..++|+||.+.. +. .....+-+.|++.+ ++||..++.+.+|.
T Consensus 73 ~~~Dl~d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~~~V~~SS~~vyg~ 144 (362)
T 3sxp_A 73 IAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK--AKVIYASSAGVYGN 144 (362)
T ss_dssp EECCTTCHHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT--CEEEEEEEGGGGCS
T ss_pred EECCCCCHHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC--CcEEEeCcHHHhCC
Confidence 4444422 12 457788886532 11 22345667888888 77999888777663
No 213
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=88.29 E-value=1.1 Score=48.11 Aligned_cols=101 Identities=16% Similarity=0.194 Sum_probs=65.0
Q ss_pred eEEEEcC-ChhHHHHHHHHHHh-CCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeeccc
Q 001356 110 NILISGM-QGLGAEIAKNLILA-GVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTEL 187 (1093)
Q Consensus 110 ~VlIiG~-gglGseiaKnLvla-GVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l 187 (1093)
+|+|+|+ |.+|..+++.+... |..=+.++|.. +|+ +.+....++|-|++..-..
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------~dl---------~~~~~~~~DvvIDfT~p~a 57 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------DPL---------SLLTDGNTEVVIDFTHPDV 57 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------CCT---------HHHHHTTCCEEEECSCTTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------CCH---------HHHhccCCcEEEEccChHH
Confidence 7999997 88999999998765 76555566643 111 1122235666665543332
Q ss_pred chhhh-----cCCceEEEecC-CHHHHHHHHHHHHhc-CCCcceEeeeecceeEEE
Q 001356 188 TKEKL-----SDFQAVVFTDI-SLEKAVEFDDYCHNH-QPPIAFIKSEVRGLFGNI 236 (1093)
Q Consensus 188 ~~~~l-----~~~dvVV~~~~-~~~~~~~ln~~c~~~-~~~ip~I~~~~~G~~G~v 236 (1093)
..+++ .+.++||.|+. +.+....|.++|++. + +|++.+..+++...+
T Consensus 58 ~~~~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~--~~vv~a~N~siGv~l 111 (245)
T 1p9l_A 58 VMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPN--TSVLIAPNFAIGAVL 111 (245)
T ss_dssp HHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTSTT--CEEEECSCCCHHHHH
T ss_pred HHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHHhCCC--CCEEEECCccHHHHH
Confidence 22222 25678887764 566677888899876 7 888888777665433
No 214
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=88.29 E-value=0.29 Score=50.39 Aligned_cols=32 Identities=19% Similarity=0.399 Sum_probs=29.5
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
...|+|||+|..|...|..|++.|+ +++|+|.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~------~V~v~Ek 33 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGH------QVHLFDK 33 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC------CEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC------CEEEEEC
Confidence 4579999999999999999999999 8999985
No 215
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=88.27 E-value=0.69 Score=51.84 Aligned_cols=76 Identities=14% Similarity=0.149 Sum_probs=50.5
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCC--EE
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHL--NT 582 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~--~i 582 (1093)
..||.|||+|.+|+.++..|+..|+. ++|+++|.+ ..|++..+.-|+...|.. .+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~----~~l~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~v 61 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGIT----DELVVIDVN-------------------KEKAMGDVMDLNHGKAFAPQPV 61 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSC-------------------HHHHHHHHHHHHHTGGGSSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC----ceEEEEecc-------------------hHHHHHHHHHHHhccccccCCe
Confidence 46899999999999999999999973 589999842 335555455555544422 22
Q ss_pred EEEecccCccccccchhhhhccCCEEEEccC
Q 001356 583 EALQIRANPETENVFNDTFWENLNVVVNALD 613 (1093)
Q Consensus 583 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~alD 613 (1093)
..+... .+-+++.|+||.+..
T Consensus 62 ~i~~~~----------~~a~~~aDvVvi~ag 82 (326)
T 3pqe_A 62 KTSYGT----------YEDCKDADIVCICAG 82 (326)
T ss_dssp EEEEEC----------GGGGTTCSEEEECCS
T ss_pred EEEeCc----------HHHhCCCCEEEEecc
Confidence 222211 123578999998853
No 216
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=88.27 E-value=2.8 Score=46.34 Aligned_cols=72 Identities=15% Similarity=0.118 Sum_probs=47.6
Q ss_pred eEEEEcCChhHHHHHHHHHHhC-CceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHH----hCCCcEEEEee
Q 001356 110 NILISGMQGLGAEIAKNLILAG-VKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQE----LNNAVAISALT 184 (1093)
Q Consensus 110 ~VlIiG~gglGseiaKnLvlaG-Vg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~e----LNp~V~V~~~~ 184 (1093)
+|.|+|+|.+|+.+|..|+..| ..+++++|.+. .|++.....+.+ .....++....
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~~i~~t~ 62 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE-------------------GIPQGKALDMYESGPVGLFDTKVTGSN 62 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------hHHHHHHHhHHhhhhcccCCcEEEECC
Confidence 7999999999999999999876 35799998642 122222222222 23344555433
Q ss_pred cccchhhhcCCceEEEecC
Q 001356 185 TELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 185 ~~l~~~~l~~~dvVV~~~~ 203 (1093)
+. ++ +++.|+||.+..
T Consensus 63 -d~-~~-l~~aDvViiav~ 78 (310)
T 1guz_A 63 -DY-AD-TANSDIVIITAG 78 (310)
T ss_dssp -CG-GG-GTTCSEEEECCS
T ss_pred -CH-HH-HCCCCEEEEeCC
Confidence 22 23 889999999874
No 217
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=88.26 E-value=0.79 Score=51.86 Aligned_cols=93 Identities=16% Similarity=0.128 Sum_probs=61.2
Q ss_pred CcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEE
Q 001356 506 AKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEA 584 (1093)
Q Consensus 506 ~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~ 584 (1093)
.||.|||+ |.+|.|+++.|..--. .+|+.+. ..+..|+. +....|+..
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~-----~el~~l~---------------S~~~aG~~--------~~~~~p~~~--- 62 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPE-----AKITYLS---------------SRTYAGKK--------LEEIFPSTL--- 62 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTT-----EEEEEEE---------------CSTTTTSB--------HHHHCGGGC---
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCC-----cEEEEEe---------------CcccccCC--------hHHhChhhc---
Confidence 47999996 9999999999997644 5665543 33455543 333455543
Q ss_pred EecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceEecc
Q 001356 585 LQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLESG 636 (1093)
Q Consensus 585 ~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~sg 636 (1093)
..-.+.+ .-.++++.++|+||-|+..-.++.+...+ .+..+||.+
T Consensus 63 ~~l~~~~----~~~~~~~~~~Dvvf~alp~~~s~~~~~~~---~g~~VIDlS 107 (351)
T 1vkn_A 63 ENSILSE----FDPEKVSKNCDVLFTALPAGASYDLVREL---KGVKIIDLG 107 (351)
T ss_dssp CCCBCBC----CCHHHHHHHCSEEEECCSTTHHHHHHTTC---CSCEEEESS
T ss_pred cCceEEe----CCHHHhhcCCCEEEECCCcHHHHHHHHHh---CCCEEEECC
Confidence 1111111 10134568899999999999999998877 577777633
No 218
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=88.24 E-value=0.87 Score=49.43 Aligned_cols=35 Identities=34% Similarity=0.517 Sum_probs=30.2
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.+.+++|+|.|+ ||||.++++.|+..|. +++++|.
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~------~V~~~~r 60 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGA------HVVVTAR 60 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEEC
Confidence 356788999996 9999999999999997 7888874
No 219
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.24 E-value=0.78 Score=51.43 Aligned_cols=75 Identities=21% Similarity=0.250 Sum_probs=51.7
Q ss_pred hcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCC---CC
Q 001356 504 EEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINP---HL 580 (1093)
Q Consensus 504 ~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np---~~ 580 (1093)
...||.|||+|.+|+.++..|+..|+. ++|+++|.+ ..|++..+.-|....| .+
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~----~el~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~ 64 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIA----QEIGIVDIF-------------------KDKTKGDAIDLEDALPFTSPK 64 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC----CeEEEEeCC-------------------hHHHHHHHhhHhhhhhhcCCc
Confidence 456899999999999999999999983 589999842 2355555555655443 33
Q ss_pred EEEEEecccCccccccchhhhhccCCEEEEccC
Q 001356 581 NTEALQIRANPETENVFNDTFWENLNVVVNALD 613 (1093)
Q Consensus 581 ~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alD 613 (1093)
++. .. . .+-+++.|+||.+..
T Consensus 65 ~i~--~~---~-------~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 65 KIY--SA---E-------YSDAKDADLVVITAG 85 (326)
T ss_dssp EEE--EC---C-------GGGGTTCSEEEECCC
T ss_pred EEE--EC---c-------HHHhcCCCEEEECCC
Confidence 332 21 0 123678999998854
No 220
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.23 E-value=0.79 Score=52.01 Aligned_cols=35 Identities=26% Similarity=0.298 Sum_probs=32.1
Q ss_pred HhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeC
Q 001356 105 RLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 105 kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
.++..+|+|+|+|++|..+++.+...|. +++++|.
T Consensus 164 ~l~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr 198 (361)
T 1pjc_A 164 GVKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDI 198 (361)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeC
Confidence 3677999999999999999999999999 8999985
No 221
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=88.16 E-value=0.44 Score=51.23 Aligned_cols=33 Identities=30% Similarity=0.428 Sum_probs=28.2
Q ss_pred cCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 505 EAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 505 ~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.++|+|.| .|+||.++++.|+..|. +++++|.+
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~------~V~~~~r~ 36 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAE------ILRLADLS 36 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEE------EEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCC------EEEEEecC
Confidence 45799999 59999999999999986 78888754
No 222
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=88.15 E-value=1.2 Score=48.08 Aligned_cols=66 Identities=11% Similarity=0.154 Sum_probs=44.4
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecccc
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTELT 188 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l~ 188 (1093)
.+|.|||+|.+|..++++|.. |. +++++|.+. .+++.+.+. .+.+ .. .
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~-------------------~~~~~~~~~------g~~~--~~---~ 49 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTF-------------------EKALRHQEE------FGSE--AV---P 49 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS-CEEEECSST-------------------HHHHHHHHH------HCCE--EC---C
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCH-------------------HHHHHHHHC------CCcc--cC---H
Confidence 379999999999999999999 86 578877421 233332221 1221 11 3
Q ss_pred hhhhcCCceEEEecCCHH
Q 001356 189 KEKLSDFQAVVFTDISLE 206 (1093)
Q Consensus 189 ~~~l~~~dvVV~~~~~~~ 206 (1093)
.+.+.++|+||.|..+..
T Consensus 50 ~~~~~~~D~vi~~v~~~~ 67 (289)
T 2cvz_A 50 LERVAEARVIFTCLPTTR 67 (289)
T ss_dssp GGGGGGCSEEEECCSSHH
T ss_pred HHHHhCCCEEEEeCCChH
Confidence 456678999999987654
No 223
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=88.11 E-value=0.5 Score=53.72 Aligned_cols=35 Identities=17% Similarity=0.411 Sum_probs=30.1
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
++..+|.|||+|.+|..++++|+..|. +++++|.+
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~------~V~v~dr~ 54 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGH------ECVVYDLN 54 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCC------EEEEEeCC
Confidence 456899999999999999999999997 78888854
No 224
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=88.00 E-value=0.84 Score=48.78 Aligned_cols=34 Identities=12% Similarity=0.249 Sum_probs=30.0
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCC---ceEEEEeCC
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGV---KSVTLHDEG 141 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGV---g~itLvD~d 141 (1093)
..+|.|||+|.+|+.++++|...|. ..++++|.+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCC
Confidence 3589999999999999999999995 689998864
No 225
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=88.00 E-value=0.98 Score=48.67 Aligned_cols=34 Identities=29% Similarity=0.344 Sum_probs=30.9
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
++. +|+|||+|++|..+++.|...|+ +++++|.+
T Consensus 115 l~~-~v~iiG~G~~g~~~a~~l~~~g~-~v~v~~r~ 148 (263)
T 2d5c_A 115 LKG-PALVLGAGGAGRAVAFALREAGL-EVWVWNRT 148 (263)
T ss_dssp CCS-CEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCC-eEEEECCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 567 99999999999999999999998 89998863
No 226
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=87.99 E-value=1.7 Score=44.70 Aligned_cols=30 Identities=20% Similarity=0.346 Sum_probs=27.0
Q ss_pred eEEEEc-CChhHHHHHHHHHHhCCceEEEEeC
Q 001356 110 NILISG-MQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 110 ~VlIiG-~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
+|+|+| +|.+|..+++.|...|. +++++|.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r 32 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSR 32 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 699999 99999999999999996 6888775
No 227
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=87.98 E-value=0.89 Score=50.18 Aligned_cols=32 Identities=19% Similarity=0.260 Sum_probs=27.0
Q ss_pred CcEEEEcc-CcchHHHHHHHHHc-ccccCCCcceEEecCC
Q 001356 506 AKVFVVGS-GALGCEFLKNLALM-GVSCGNQGKLTITDDD 543 (1093)
Q Consensus 506 ~~VlivG~-GgiG~e~lknLa~~-Gv~~~~~g~i~liD~D 543 (1093)
++|+|.|+ |.||..+++.|+.. |. +++++|.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~------~V~~~~r~ 34 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHY------EVYGLDIG 34 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTC------EEEEEESC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCC------EEEEEeCC
Confidence 47999997 99999999999998 65 78887753
No 228
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=87.97 E-value=1.2 Score=52.39 Aligned_cols=36 Identities=19% Similarity=0.208 Sum_probs=28.8
Q ss_pred HhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeC
Q 001356 105 RLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 105 kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
.+..++|+|+|+|++|..++..|+..|--+|+++|.
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R 55 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACR 55 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEES
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEEC
Confidence 355678999999999999999999984447998875
No 229
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=87.97 E-value=1.3 Score=48.80 Aligned_cols=32 Identities=22% Similarity=0.219 Sum_probs=29.0
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEec
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITD 541 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD 541 (1093)
.||.|||+|+||+.++-.|+..|.. ++|.|+|
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~----~el~L~D 32 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV----DEIALVD 32 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC----SEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC----CEEEEEe
Confidence 4899999999999999999999974 7899997
No 230
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=87.97 E-value=1.1 Score=50.87 Aligned_cols=77 Identities=13% Similarity=0.130 Sum_probs=54.5
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHH-hCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEee
Q 001356 106 LFASNILISGMQGLGAEIAKNLIL-AGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALT 184 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvl-aGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~ 184 (1093)
....+|+|||+|+.|..++..|.. .++.+|+++|.+ ..|++.+++.+.+. +.+.+....
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~-------------------~~~a~~la~~~~~~-~g~~~~~~~ 186 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTD-------------------PLATAKLIANLKEY-SGLTIRRAS 186 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSS-------------------HHHHHHHHHHHTTC-TTCEEEECS
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCC-------------------HHHHHHHHHHHHhc-cCceEEEeC
Confidence 346799999999999999999864 578999998752 23677766666442 344454432
Q ss_pred cccchhhhcCCceEEEecCC
Q 001356 185 TELTKEKLSDFQAVVFTDIS 204 (1093)
Q Consensus 185 ~~l~~~~l~~~dvVV~~~~~ 204 (1093)
. .++.+.+.|+||.|+.+
T Consensus 187 ~--~~eav~~aDiVi~aTps 204 (350)
T 1x7d_A 187 S--VAEAVKGVDIITTVTAD 204 (350)
T ss_dssp S--HHHHHTTCSEEEECCCC
T ss_pred C--HHHHHhcCCEEEEeccC
Confidence 1 23567789999998854
No 231
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=87.93 E-value=0.61 Score=51.45 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=28.4
Q ss_pred hcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 504 EEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 504 ~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
++++|+|.|+ |+||..+++.|+..|. +++++|.
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~------~V~~~~r 35 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGY------EVYGADR 35 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEECS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEEC
Confidence 4678999997 9999999999999986 7888774
No 232
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=87.93 E-value=2.6 Score=46.74 Aligned_cols=83 Identities=19% Similarity=0.091 Sum_probs=52.2
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCCc-eEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecc
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGVK-SVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTE 186 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGVg-~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~ 186 (1093)
-.+|.|||+|.+|..+|+.|...|.. .|+++|.+.- +++ .+.++.-... . ..+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~-------------------~~~----~a~~~G~~~~--~-~~~ 86 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE-------------------SIS----KAVDLGIIDE--G-TTS 86 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH-------------------HHH----HHHHTTSCSE--E-ESC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHH-------------------HHH----HHHHCCCcch--h-cCC
Confidence 36899999999999999999999974 7888875321 122 2222221001 1 112
Q ss_pred cchh-hhcCCceEEEecCCHHHHHHHHHHHHh
Q 001356 187 LTKE-KLSDFQAVVFTDISLEKAVEFDDYCHN 217 (1093)
Q Consensus 187 l~~~-~l~~~dvVV~~~~~~~~~~~ln~~c~~ 217 (1093)
+ ++ .+.++|+||.|.-.......+.++...
T Consensus 87 ~-~~~~~~~aDvVilavp~~~~~~vl~~l~~~ 117 (314)
T 3ggo_A 87 I-AKVEDFSPDFVMLSSPVRTFREIAKKLSYI 117 (314)
T ss_dssp T-TGGGGGCCSEEEECSCGGGHHHHHHHHHHH
T ss_pred H-HHHhhccCCEEEEeCCHHHHHHHHHHHhhc
Confidence 2 34 678999999998654444444454443
No 233
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.92 E-value=0.64 Score=49.54 Aligned_cols=82 Identities=11% Similarity=0.204 Sum_probs=49.9
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEEE
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEAL 585 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~~ 585 (1093)
.||.|||+|.+|+.++++|+..|.. +..+++++|.+ ..|++.+++.. . +. .
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~--~~~~V~~~~r~-------------------~~~~~~~~~~~---g--~~--~- 53 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIV--SSNQIICSDLN-------------------TANLKNASEKY---G--LT--T- 53 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSS--CGGGEEEECSC-------------------HHHHHHHHHHH---C--CE--E-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCC--CCCeEEEEeCC-------------------HHHHHHHHHHh---C--CE--E-
Confidence 6899999999999999999999851 11377777632 12333333221 1 11 1
Q ss_pred ecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcc
Q 001356 586 QIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRC 625 (1093)
Q Consensus 586 ~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c 625 (1093)
..+. .+..++.|+||.|+.....+..+....
T Consensus 54 ----~~~~-----~e~~~~aDvVilav~~~~~~~v~~~l~ 84 (247)
T 3gt0_A 54 ----TTDN-----NEVAKNADILILSIKPDLYASIINEIK 84 (247)
T ss_dssp ----CSCH-----HHHHHHCSEEEECSCTTTHHHHC---C
T ss_pred ----eCCh-----HHHHHhCCEEEEEeCHHHHHHHHHHHH
Confidence 1111 245678999999996655666655543
No 234
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=87.91 E-value=2.5 Score=44.02 Aligned_cols=36 Identities=22% Similarity=0.324 Sum_probs=30.6
Q ss_pred hhcCeEEEEc-CChhHHHHHHHHHHhCCc-eEEEEeCC
Q 001356 106 LFASNILISG-MQGLGAEIAKNLILAGVK-SVTLHDEG 141 (1093)
Q Consensus 106 L~~s~VlIiG-~gglGseiaKnLvlaGVg-~itLvD~d 141 (1093)
|...+|+|.| .|++|.++++.|+..|.. ++++++.+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESS
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcC
Confidence 5678999999 588999999999999973 78888764
No 235
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=87.91 E-value=0.89 Score=49.56 Aligned_cols=37 Identities=30% Similarity=0.431 Sum_probs=29.1
Q ss_pred HhhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCc
Q 001356 105 RLFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGV 142 (1093)
Q Consensus 105 kL~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~ 142 (1093)
.+...+|||.|+ |.+|+.+++.|...|. +|++++...
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 41 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGE-EVTVLDDLR 41 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEECCCS
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCC-EEEEEecCC
Confidence 356789999998 7799999999999996 677777643
No 236
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=87.87 E-value=0.4 Score=54.72 Aligned_cols=37 Identities=27% Similarity=0.425 Sum_probs=35.1
Q ss_pred HhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 105 RLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 105 kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
+|+..+|+|+|+|..|..+|+.|+..|+++|+++|.+
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 5788999999999999999999999999999999975
No 237
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=87.86 E-value=0.81 Score=46.95 Aligned_cols=92 Identities=16% Similarity=0.118 Sum_probs=58.5
Q ss_pred eEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecccc
Q 001356 110 NILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTELT 188 (1093)
Q Consensus 110 ~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l~ 188 (1093)
+|+|.|+ |++|.++++.|+..|. ++++++.+. .+ +.++.+.+++ ...+++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~-------------------~~-------~~~~~~~~~~--~~~D~~ 52 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNA-------------------GK-------ITQTHKDINI--LQKDIF 52 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCS-------------------HH-------HHHHCSSSEE--EECCGG
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCc-------------------hh-------hhhccCCCeE--Eecccc
Confidence 6999995 7899999999999994 777776531 11 2222244443 333432
Q ss_pred h---hhhcCCceEEEecCC--------HHHHHHHHHHHHhcCCCcceEeeeecc
Q 001356 189 K---EKLSDFQAVVFTDIS--------LEKAVEFDDYCHNHQPPIAFIKSEVRG 231 (1093)
Q Consensus 189 ~---~~l~~~dvVV~~~~~--------~~~~~~ln~~c~~~~~~ip~I~~~~~G 231 (1093)
+ +.+.++|+||.+... ......+-+.|++.+. ..+|..++.+
T Consensus 53 d~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~-~~~v~~SS~~ 105 (221)
T 3ew7_A 53 DLTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVS-PRLLVVGGAA 105 (221)
T ss_dssp GCCHHHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCS-SEEEEECCCC
T ss_pred ChhhhhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCC-ceEEEEecce
Confidence 2 467789999987532 2344567778887752 3566655543
No 238
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=87.85 E-value=0.84 Score=50.40 Aligned_cols=32 Identities=25% Similarity=0.395 Sum_probs=27.8
Q ss_pred CcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 506 AKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 506 ~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
++|+|.|+ |.||+.+++.|+..|. +++++|.+
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 46 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGH------DLVLIHRP 46 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC------EEEEEecC
Confidence 48999995 9999999999999986 78888754
No 239
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=87.70 E-value=1.1 Score=50.05 Aligned_cols=93 Identities=14% Similarity=0.096 Sum_probs=57.8
Q ss_pred hhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEee
Q 001356 106 LFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALT 184 (1093)
Q Consensus 106 L~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~ 184 (1093)
|...+|||.|+ |.+|..+++.|...| .++++++.+.- -...|+.. .+.+.. +.+ +.+.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~---------------~~~~~~~~-~~~l~~--~~v--~~~~ 66 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGP---------------RSPSKAKI-FKALED--KGA--IIVY 66 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSC---------------CCHHHHHH-HHHHHH--TTC--EEEE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCC---------------CChhHHHH-HHHHHh--CCc--EEEE
Confidence 44578999998 779999999999999 56777765320 00112221 122222 333 4444
Q ss_pred cccch-----hhhc--CCceEEEecC--CHHHHHHHHHHHHhcC
Q 001356 185 TELTK-----EKLS--DFQAVVFTDI--SLEKAVEFDDYCHNHQ 219 (1093)
Q Consensus 185 ~~l~~-----~~l~--~~dvVV~~~~--~~~~~~~ln~~c~~~~ 219 (1093)
.++++ ..++ ++|+||.+.. +......+-+.|++.+
T Consensus 67 ~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g 110 (346)
T 3i6i_A 67 GLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVG 110 (346)
T ss_dssp CCTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHC
T ss_pred eecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcC
Confidence 55532 3567 8999998765 4556677888888876
No 240
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=87.68 E-value=0.96 Score=48.97 Aligned_cols=86 Identities=15% Similarity=0.197 Sum_probs=53.8
Q ss_pred HHhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCC-
Q 001356 502 KLEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPH- 579 (1093)
Q Consensus 502 ~L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~- 579 (1093)
.+.+++|+|.| .||||.++++.|+..|. +++++|.+. .+.+.+++.++...+.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~ 62 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA------SVMIVGRNP-------------------DKLAGAVQELEALGANG 62 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHTTCCSS
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHHhCCCC
Confidence 46778999998 59999999999999997 788887431 2344455556554432
Q ss_pred CEEEEEecccCcccc--ccch--hhhhccCCEEEEcc
Q 001356 580 LNTEALQIRANPETE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 580 ~~i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~al 612 (1093)
.++..+..++..... ..++ .+.+...|++|++.
T Consensus 63 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA 99 (281)
T 3svt_A 63 GAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCA 99 (281)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 266666666654221 1111 01234567777653
No 241
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=87.64 E-value=0.47 Score=52.11 Aligned_cols=35 Identities=11% Similarity=0.079 Sum_probs=32.8
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeC
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
++.++|+|+|+||.|..++..|...|+++|+|++.
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nR 154 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTR 154 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEES
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeC
Confidence 56889999999999999999999999999999875
No 242
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=87.60 E-value=1.1 Score=49.34 Aligned_cols=32 Identities=28% Similarity=0.458 Sum_probs=28.8
Q ss_pred CeEEEEc-CChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 109 SNILISG-MQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 109 s~VlIiG-~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
.+|.||| +|.+|..+++.|...|. .++++|.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY-PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 5799999 99999999999999997 78888854
No 243
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=87.58 E-value=0.91 Score=50.67 Aligned_cols=83 Identities=14% Similarity=0.097 Sum_probs=58.4
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeeccc
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTEL 187 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l 187 (1093)
..+|+|+|+|.+|..+++.|...|. ++++|.+.- +++ +++ ..+. +...+.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~--v~vid~~~~-------------------~~~-----~~~--~~~~--~i~gd~ 164 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV--FVLAEDENV-------------------RKK-----VLR--SGAN--FVHGDP 164 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE--EEEESCGGG-------------------HHH-----HHH--TTCE--EEESCT
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc--EEEEeCChh-------------------hhh-----HHh--CCcE--EEEeCC
Confidence 5689999999999999999999987 888886331 222 222 2333 333333
Q ss_pred c-h-----hhhcCCceEEEecCCHHHHHHHHHHHHhcCC
Q 001356 188 T-K-----EKLSDFQAVVFTDISLEKAVEFDDYCHNHQP 220 (1093)
Q Consensus 188 ~-~-----~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~ 220 (1093)
+ + .-++++|.||.+..+.+.-..+-..+++.++
T Consensus 165 ~~~~~L~~a~i~~a~~vi~~~~~d~~n~~~~~~ar~~~~ 203 (336)
T 1lnq_A 165 TRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDE 203 (336)
T ss_dssp TSHHHHHHTCSTTEEEEEECCSSHHHHHHHHHHHHTTCT
T ss_pred CCHHHHHhcChhhccEEEEcCCccHHHHHHHHHHHHHCC
Confidence 2 2 2366789999988877777778888899884
No 244
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=87.56 E-value=0.99 Score=50.46 Aligned_cols=33 Identities=27% Similarity=0.418 Sum_probs=29.4
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.||.|||+|.+|..++..|+..|. ..++++|-|
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~-----~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNL-----GDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEeCC
Confidence 589999999999999999999998 459999854
No 245
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.53 E-value=0.9 Score=51.89 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=32.6
Q ss_pred HhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeC
Q 001356 105 RLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 105 kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
.+..++|+|+|+|++|..+++.+...|. +|+++|.
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~ 199 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDI 199 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeC
Confidence 5889999999999999999999999999 7999885
No 246
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=87.48 E-value=4 Score=45.01 Aligned_cols=71 Identities=15% Similarity=0.209 Sum_probs=49.1
Q ss_pred eEEEEc-CChhHHHHHHHHHHhCC-ceEEEEeC--CcceeeCCCcceecccCcccchHHHHHHHHHHH---hCCCcEEEE
Q 001356 110 NILISG-MQGLGAEIAKNLILAGV-KSVTLHDE--GVVELWDLSSNFIFSEDDVGKNRALASIQKLQE---LNNAVAISA 182 (1093)
Q Consensus 110 ~VlIiG-~gglGseiaKnLvlaGV-g~itLvD~--d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~e---LNp~V~V~~ 182 (1093)
+|+|+| +|.+|..++..|+..|. .++.|+|. +. .|++..+..|.. +...+++..
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~-------------------~~~~~~~~dl~~~~~~~~~~~v~~ 62 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKE-------------------DDTVGQAADTNHGIAYDSNTRVRQ 62 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGH-------------------HHHHHHHHHHHHHHTTTCCCEEEE
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCCh-------------------hhHHHHHHHHHHHHhhCCCcEEEe
Confidence 799999 99999999999998885 45888885 21 123322233333 355667765
Q ss_pred eecccchhhhcCCceEEEecC
Q 001356 183 LTTELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 183 ~~~~l~~~~l~~~dvVV~~~~ 203 (1093)
. +.+.+++.|+||.+..
T Consensus 63 --~--~~~a~~~aDvVi~~ag 79 (303)
T 1o6z_A 63 --G--GYEDTAGSDVVVITAG 79 (303)
T ss_dssp --C--CGGGGTTCSEEEECCC
T ss_pred --C--CHHHhCCCCEEEEcCC
Confidence 2 2556889999998754
No 247
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=87.39 E-value=1.2 Score=47.86 Aligned_cols=84 Identities=15% Similarity=0.220 Sum_probs=52.2
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHL 580 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~ 580 (1093)
.|.+++++|.|+ ||||.++++.|+..|. +++++|.+ ..+.+.+++.+.... .
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~~~~~~--~ 60 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGA------DLVLAART-------------------VERLEDVAKQVTDTG--R 60 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHHTT--C
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcC------EEEEEeCC-------------------HHHHHHHHHHHHhcC--C
Confidence 467888999985 8999999999999997 78888743 224444555555543 3
Q ss_pred EEEEEecccCcccc--ccch--hhhhccCCEEEEcc
Q 001356 581 NTEALQIRANPETE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 581 ~i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~al 612 (1093)
++..+..++.+... ..++ .+-+...|++|++.
T Consensus 61 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 61 RALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNA 96 (264)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECC
T ss_pred cEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 45556655554221 1111 01134667777654
No 248
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.34 E-value=1.9 Score=47.04 Aligned_cols=31 Identities=32% Similarity=0.456 Sum_probs=28.0
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeC
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
.+|+|||+|.+|+.+|..|...|. +++++|.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r 34 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQ 34 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEEC
Confidence 489999999999999999999996 7888875
No 249
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.34 E-value=2.2 Score=46.04 Aligned_cols=30 Identities=23% Similarity=0.246 Sum_probs=27.2
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEEeC
Q 001356 110 NILISGMQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 110 ~VlIiG~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
+|.|||+|.+|..+++.|...|. +++++|.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 31 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSR 31 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 79999999999999999999997 6888774
No 250
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=87.30 E-value=0.6 Score=49.00 Aligned_cols=31 Identities=16% Similarity=0.400 Sum_probs=27.1
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEE-ecC
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTI-TDD 542 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~l-iD~ 542 (1093)
.+|.|||+|.+|..+++.|+..|. ++++ +|.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~------~V~~v~~r 55 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQI------PAIIANSR 55 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTC------CEEEECTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------EEEEEECC
Confidence 689999999999999999999987 6666 653
No 251
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=87.25 E-value=1.7 Score=48.48 Aligned_cols=33 Identities=27% Similarity=0.294 Sum_probs=28.9
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
..+|+|||+|.+|+.+|..|...|. .++++|.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 3689999999999999999999996 68888753
No 252
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=87.24 E-value=2.1 Score=47.72 Aligned_cols=35 Identities=29% Similarity=0.260 Sum_probs=29.3
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
+.-.+|.|||+|..|+.+|.+|+.+|. .++++|.+
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~ 38 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIE 38 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSC
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 345789999999999999999999997 68888864
No 253
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=87.23 E-value=1.3 Score=52.19 Aligned_cols=125 Identities=14% Similarity=0.124 Sum_probs=65.5
Q ss_pred hcCcEEEEcc-CcchHHHHHHHHHc---ccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCC
Q 001356 504 EEAKVFVVGS-GALGCEFLKNLALM---GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPH 579 (1093)
Q Consensus 504 ~~~~VlivG~-GgiG~e~lknLa~~---Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~ 579 (1093)
..++|+|.|+ |.||+++++.|+.. |. ++++++...-....+.| +- ........... +.+.... .
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~------~V~~l~R~~~~~~~~~~--l~--~~~~~~~~~~~-~~~~~~~-~ 139 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDG------RLICLVRAESDEDARRR--LE--KTFDSGDPELL-RHFKELA-A 139 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTC------EEEEEECSSSHHHHHHH--HH--GGGCSSCHHHH-HHHHHHH-T
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCC------EEEEEECCCCcHHHHHH--HH--HHHHhcchhhh-hhhhhhc-c
Confidence 4679999995 99999999999998 54 78887643111100000 00 00000000000 0111111 1
Q ss_pred CEEEEEecccCccc----cccchhhhhccCCEEEEccC-------------CHHHHHHHhhccccccc-ceEeccccCcc
Q 001356 580 LNTEALQIRANPET----ENVFNDTFWENLNVVVNALD-------------NVNARLYIDQRCLYFQK-PLLESGTLGAK 641 (1093)
Q Consensus 580 ~~i~~~~~~v~~~~----~~~~~~~f~~~~DvVi~alD-------------n~~aR~~i~~~c~~~~~-pli~sgt~G~~ 641 (1093)
-+++.+..++.... ...+ ...+++.|+||++.- |+..-..+-+.|...++ .+|..++.+.+
T Consensus 140 ~~v~~v~~Dl~~~~~gld~~~~-~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~ 218 (478)
T 4dqv_A 140 DRLEVVAGDKSEPDLGLDQPMW-RRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVG 218 (478)
T ss_dssp TTEEEEECCTTSGGGGCCHHHH-HHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGG
T ss_pred CceEEEEeECCCcccCCCHHHH-HHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhc
Confidence 35667777765321 0111 245678999998753 33344455667776664 66655554433
No 254
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=87.20 E-value=0.68 Score=50.28 Aligned_cols=63 Identities=14% Similarity=0.203 Sum_probs=41.5
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHL 580 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~ 580 (1093)
.+.+++++|.|+ ||||.++++.|+..|. +++++|.+ ..+.+.+++.++...+
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~~-- 73 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGI------AVYGCARD-------------------AKNVSAAVDGLRAAGH-- 73 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHTTTC--
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEeCC-------------------HHHHHHHHHHHHhcCC--
Confidence 456788999985 8999999999999997 78888743 2344455555655443
Q ss_pred EEEEEecccCc
Q 001356 581 NTEALQIRANP 591 (1093)
Q Consensus 581 ~i~~~~~~v~~ 591 (1093)
++..+..++.+
T Consensus 74 ~~~~~~~Dv~d 84 (279)
T 3sju_A 74 DVDGSSCDVTS 84 (279)
T ss_dssp CEEEEECCTTC
T ss_pred cEEEEECCCCC
Confidence 45556555553
No 255
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=87.19 E-value=1.3 Score=49.86 Aligned_cols=36 Identities=28% Similarity=0.247 Sum_probs=31.2
Q ss_pred HHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeC
Q 001356 104 RRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 104 ~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
..|...+|.|||+|.+|..+|++|...|+ +++++|.
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~-~V~~~~~ 47 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGV-DVTVGLR 47 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTC-CEEEECC
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcC-EEEEEEC
Confidence 35777899999999999999999999997 5777765
No 256
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=87.19 E-value=0.91 Score=51.63 Aligned_cols=35 Identities=26% Similarity=0.320 Sum_probs=32.3
Q ss_pred HhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeC
Q 001356 105 RLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 105 kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
.+...+|+|+|+|++|..+++.+...|. +++++|.
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~ 197 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGA-QVTILDV 197 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 4788999999999999999999999999 7999885
No 257
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=87.19 E-value=1.4 Score=48.70 Aligned_cols=34 Identities=21% Similarity=0.167 Sum_probs=29.4
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.||.|+|+|.+|..++..|+..|.. ++|+++|.+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~----~~v~L~D~~ 34 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV----DEIALVDIA 34 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CeEEEEECC
Confidence 4799999999999999999999872 489999843
No 258
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.18 E-value=0.74 Score=49.06 Aligned_cols=32 Identities=16% Similarity=0.262 Sum_probs=28.3
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCC---ceEEEEeC
Q 001356 109 SNILISGMQGLGAEIAKNLILAGV---KSVTLHDE 140 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGV---g~itLvD~ 140 (1093)
.+|.|||+|.+|..++++|...|. ..++++|.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r 37 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDL 37 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeC
Confidence 589999999999999999999996 47777775
No 259
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=87.13 E-value=1.4 Score=46.98 Aligned_cols=62 Identities=24% Similarity=0.252 Sum_probs=43.4
Q ss_pred HhhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCC-cEEEE
Q 001356 105 RLFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNA-VAISA 182 (1093)
Q Consensus 105 kL~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~-V~V~~ 182 (1093)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+ ..+++.+.+.+.+.++. .++..
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 63 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARS-------------------KQNLEKVHDEIMRSNKHVQEPIV 63 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESC-------------------HHHHHHHHHHHHHHCTTSCCCEE
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHHhccccCcceE
Confidence 356788999985 6899999999999998 67777742 23566667777777654 34444
Q ss_pred eecc
Q 001356 183 LTTE 186 (1093)
Q Consensus 183 ~~~~ 186 (1093)
+..+
T Consensus 64 ~~~D 67 (250)
T 3nyw_A 64 LPLD 67 (250)
T ss_dssp EECC
T ss_pred Eecc
Confidence 4333
No 260
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=87.12 E-value=1.4 Score=48.39 Aligned_cols=34 Identities=32% Similarity=0.345 Sum_probs=27.8
Q ss_pred hhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeC
Q 001356 106 LFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 106 L~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
|+..+|||.|+ |++|.++++.|+..|. +|+++|.
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r 35 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGY-EVYGADR 35 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEEC
Confidence 34678999997 7899999999999995 7777775
No 261
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=87.05 E-value=2.2 Score=48.11 Aligned_cols=103 Identities=15% Similarity=0.167 Sum_probs=59.5
Q ss_pred hhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCccee-eCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEe
Q 001356 106 LFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVEL-WDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISAL 183 (1093)
Q Consensus 106 L~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~-sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~ 183 (1093)
+...+|||.|+ |.+|..+++.|...|..+|+++|...-.. ..+. -.+ .++.+
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~------------------------~~~--~v~~~ 83 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP------------------------DHP--AVRFS 83 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC------------------------CCT--TEEEE
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc------------------------CCC--ceEEE
Confidence 45578999996 77999999999999955788877532110 0000 011 23444
Q ss_pred ecccch-----hhhcCCceEEEecCC--H---------------HHHHHHHHHHHhc-CCCcceEeeeecceeEE
Q 001356 184 TTELTK-----EKLSDFQAVVFTDIS--L---------------EKAVEFDDYCHNH-QPPIAFIKSEVRGLFGN 235 (1093)
Q Consensus 184 ~~~l~~-----~~l~~~dvVV~~~~~--~---------------~~~~~ln~~c~~~-~~~ip~I~~~~~G~~G~ 235 (1093)
..++++ +.++++|+||.+... . .....+-+.|++. +. ..||..++.+.+|.
T Consensus 84 ~~Dl~d~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~-~~~V~~SS~~vyg~ 157 (377)
T 2q1s_A 84 ETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRL-KKVVYSAAGCSIAE 157 (377)
T ss_dssp CSCTTCHHHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSC-CEEEEEEEC-----
T ss_pred ECCCCCHHHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEEeCCHHHcCC
Confidence 444432 245578888866431 1 1234556777777 62 27888877766653
No 262
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=87.04 E-value=0.48 Score=54.16 Aligned_cols=38 Identities=29% Similarity=0.370 Sum_probs=35.7
Q ss_pred HhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCc
Q 001356 105 RLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGV 142 (1093)
Q Consensus 105 kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~ 142 (1093)
+++..+|+|+|+|..|..+|+.|+.+|+++|+++|..-
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 57889999999999999999999999999999999874
No 263
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=86.98 E-value=1.8 Score=47.61 Aligned_cols=97 Identities=15% Similarity=0.150 Sum_probs=57.9
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeeccc
Q 001356 109 SNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTEL 187 (1093)
Q Consensus 109 s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l 187 (1093)
.+|||.|+ |.+|..+++.|...|. +|++++.+.-....+. + + .++.+..++
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~-----------------------~--~--~~~~~~~Dl 65 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLA-----------------------Y--L--EPECRVAEM 65 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGG-----------------------G--G--CCEEEECCT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhc-----------------------c--C--CeEEEEecC
Confidence 37999995 7799999999999994 7888776432111110 0 1 223333333
Q ss_pred ch-----hhhcCCceEEEecCC---------------HHHHHHHHHHHHhcCCCcceEeeeecceeE
Q 001356 188 TK-----EKLSDFQAVVFTDIS---------------LEKAVEFDDYCHNHQPPIAFIKSEVRGLFG 234 (1093)
Q Consensus 188 ~~-----~~l~~~dvVV~~~~~---------------~~~~~~ln~~c~~~~~~ip~I~~~~~G~~G 234 (1093)
++ +.++++|+||.+... ......+-+.|++.+. ..||..++.+.+|
T Consensus 66 ~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~v~~SS~~~~~ 131 (342)
T 2x4g_A 66 LDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARV-PRILYVGSAYAMP 131 (342)
T ss_dssp TCHHHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTC-SCEEEECCGGGSC
T ss_pred CCHHHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-CeEEEECCHHhhC
Confidence 21 345667887765321 1223466678887772 2688877776665
No 264
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=86.95 E-value=1.5 Score=50.15 Aligned_cols=89 Identities=13% Similarity=0.132 Sum_probs=60.3
Q ss_pred HHHHHHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHh
Q 001356 498 KLQKKLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALI 576 (1093)
Q Consensus 498 ~~q~~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~ 576 (1093)
.....+.+++|+|.|+ |+||+++++.|+..|. .+++++|.. ..+...+.+.+...
T Consensus 28 ~~~~~~~~k~vLVTGatG~IG~~l~~~L~~~g~-----~~V~~~~r~-------------------~~~~~~~~~~l~~~ 83 (399)
T 3nzo_A 28 ELQSVVSQSRFLVLGGAGSIGQAVTKEIFKRNP-----QKLHVVDIS-------------------ENNMVELVRDIRSS 83 (399)
T ss_dssp HHHHHHHTCEEEEETTTSHHHHHHHHHHHTTCC-----SEEEEECSC-------------------HHHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEEcCChHHHHHHHHHHHHCCC-----CEEEEEECC-------------------cchHHHHHHHHHHh
Confidence 3445678999999995 8899999999999996 588888632 22334455556555
Q ss_pred CC--CCEEEEEecccCccccccchhhhh--ccCCEEEEccC
Q 001356 577 NP--HLNTEALQIRANPETENVFNDTFW--ENLNVVVNALD 613 (1093)
Q Consensus 577 np--~~~i~~~~~~v~~~~~~~~~~~f~--~~~DvVi~alD 613 (1093)
.+ ...++.+..++.+.. . . ..++ .++|+||++.-
T Consensus 84 ~~~~~~~v~~~~~Dl~d~~-~-~-~~~~~~~~~D~Vih~Aa 121 (399)
T 3nzo_A 84 FGYINGDFQTFALDIGSIE-Y-D-AFIKADGQYDYVLNLSA 121 (399)
T ss_dssp TCCCSSEEEEECCCTTSHH-H-H-HHHHHCCCCSEEEECCC
T ss_pred cCCCCCcEEEEEEeCCCHH-H-H-HHHHHhCCCCEEEECCC
Confidence 54 357778877776432 1 1 1222 58999998753
No 265
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=86.94 E-value=0.91 Score=50.23 Aligned_cols=31 Identities=26% Similarity=0.087 Sum_probs=26.9
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCCceEEEEeC
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
..+|+|||+|++|+.++..|. +|. .+++++.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~-~V~~~~r 32 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYH-DVTVVTR 32 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCC-ceEEEEC
Confidence 368999999999999999999 884 7888774
No 266
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=86.93 E-value=1.2 Score=48.91 Aligned_cols=32 Identities=31% Similarity=0.449 Sum_probs=28.6
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
.+|.|||+|.+|..++++|...|. +++++|.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 589999999999999999999997 78888753
No 267
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=86.91 E-value=0.41 Score=51.74 Aligned_cols=36 Identities=17% Similarity=0.343 Sum_probs=32.7
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCc
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGV 142 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~ 142 (1093)
++. +|+|+|+||.|..++..|...|+++|++++.+.
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 456 999999999999999999999999999998643
No 268
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=86.85 E-value=1.9 Score=48.38 Aligned_cols=73 Identities=16% Similarity=0.170 Sum_probs=48.3
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHH----HhCCCcEEEEee
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQ----ELNNAVAISALT 184 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~----eLNp~V~V~~~~ 184 (1093)
.+|.|||+|.+|..+|..|+..|...++|+|.+. .|++..+..+. .+....++...
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~~i~~t- 69 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK-------------------GMPEGKALDLSHVTSVVDTNVSVRAE- 69 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS-------------------SHHHHHHHHHHHHHHHTTCCCCEEEE-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh-------------------hHHHHHHHHHHhhhhccCCCCEEEEe-
Confidence 5899999999999999999999984599998642 12332222222 22233445442
Q ss_pred cccchhhhcCCceEEEec
Q 001356 185 TELTKEKLSDFQAVVFTD 202 (1093)
Q Consensus 185 ~~l~~~~l~~~dvVV~~~ 202 (1093)
.++. +-+++.|+||.+.
T Consensus 70 ~d~~-ea~~~aDiVi~a~ 86 (331)
T 1pzg_A 70 YSYE-AALTGADCVIVTA 86 (331)
T ss_dssp CSHH-HHHTTCSEEEECC
T ss_pred CCHH-HHhCCCCEEEEcc
Confidence 2232 2578999999886
No 269
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=86.83 E-value=0.87 Score=54.74 Aligned_cols=87 Identities=13% Similarity=0.230 Sum_probs=64.6
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEEE
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEAL 585 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~~ 585 (1093)
.+|+|+|+|-+|..+++.|...|. .+++||.|.-....+. ..+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~------~v~vid~d~~~~~~~~-------------------------------~~i 391 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV------PFILIDRQESPVCNDH-------------------------------VVV 391 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC------CEEEEESSCCSSCCSS-------------------------------CEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC------CEEEEECChHHHhhcC-------------------------------CEE
Confidence 799999999999999999999998 8999998754322211 233
Q ss_pred ecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccc
Q 001356 586 QIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKP 631 (1093)
Q Consensus 586 ~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~p 631 (1093)
..+... +..+...-.+++|.+|.++++.++-..+...++..+.+
T Consensus 392 ~gD~t~--~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~ 435 (565)
T 4gx0_A 392 YGDATV--GQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSH 435 (565)
T ss_dssp ESCSSS--STHHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred EeCCCC--HHHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCC
Confidence 333322 23344455789999999999998888888888776643
No 270
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=86.83 E-value=1.5 Score=45.07 Aligned_cols=31 Identities=26% Similarity=0.493 Sum_probs=27.4
Q ss_pred CcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 506 AKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 506 ~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.+|+|+| +|.+|+.+++.|+..|. +++++|.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~------~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGH------EIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTC------EEEEEES
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC------EEEEEeC
Confidence 3799999 99999999999999886 7888874
No 271
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=86.79 E-value=0.93 Score=49.17 Aligned_cols=35 Identities=17% Similarity=0.349 Sum_probs=30.3
Q ss_pred HHhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 502 KLEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 502 ~L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.|++++++|.| .||||.++++.|+..|. +++++|.
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~------~V~~~~r 64 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGA------QVAVAAR 64 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEeC
Confidence 36778999998 49999999999999997 7888874
No 272
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=86.76 E-value=1.6 Score=48.45 Aligned_cols=32 Identities=19% Similarity=0.348 Sum_probs=28.8
Q ss_pred cEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 507 KVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 507 ~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
||.|||+|.+|..++-.|+..|+ ++|+|+|-|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l-----~el~L~Di~ 32 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGY-----DDLLLIART 32 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC-----SCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCC-----CEEEEEcCC
Confidence 68999999999999999998888 689999854
No 273
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=86.68 E-value=0.34 Score=53.63 Aligned_cols=35 Identities=14% Similarity=0.351 Sum_probs=32.0
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+..++|+|+|+|++|..++..|+..|+ .+|+|+|.
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~-----~~V~v~nR 173 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAA-----ERIDMANR 173 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-----SEEEEECS
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCC-----CEEEEEeC
Confidence 567899999999999999999999998 89999873
No 274
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=86.66 E-value=1.1 Score=52.48 Aligned_cols=93 Identities=19% Similarity=0.244 Sum_probs=60.6
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeec
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTT 185 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~ 185 (1093)
++.++|+|+|+|+.|..+|+.|...|. ++++.|..... .+ ...+.|.+. .+++. ..
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~-~V~~~D~~~~~----------------~~---~~~~~L~~~--gi~~~--~g 62 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGA-IVTVNDGKPFD----------------EN---PTAQSLLEE--GIKVV--CG 62 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTC-EEEEEESSCGG----------------GC---HHHHHHHHT--TCEEE--ES
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEeCCccc----------------CC---hHHHHHHhC--CCEEE--EC
Confidence 567899999999999999999999995 78888864310 00 123456555 34443 23
Q ss_pred ccchhhhcC-CceEEEecC-CHHHHHHHHHHHHhcCCCcceEe
Q 001356 186 ELTKEKLSD-FQAVVFTDI-SLEKAVEFDDYCHNHQPPIAFIK 226 (1093)
Q Consensus 186 ~l~~~~l~~-~dvVV~~~~-~~~~~~~ln~~c~~~~~~ip~I~ 226 (1093)
.-.++.+.+ +|+||.+.. +.... .-..+++.| +|++.
T Consensus 63 ~~~~~~~~~~~d~vv~spgi~~~~p--~~~~a~~~g--i~v~~ 101 (451)
T 3lk7_A 63 SHPLELLDEDFCYMIKNPGIPYNNP--MVKKALEKQ--IPVLT 101 (451)
T ss_dssp CCCGGGGGSCEEEEEECTTSCTTSH--HHHHHHHTT--CCEEC
T ss_pred CChHHhhcCCCCEEEECCcCCCCCh--hHHHHHHCC--CcEEe
Confidence 323445666 999998754 22211 234567888 88774
No 275
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=86.59 E-value=1.5 Score=47.06 Aligned_cols=63 Identities=19% Similarity=0.399 Sum_probs=46.7
Q ss_pred hhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEee
Q 001356 106 LFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALT 184 (1093)
Q Consensus 106 L~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~ 184 (1093)
|++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+ ..+.+.+.+.+.+..+...+....
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 67 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRR-------------------EENVNETIKEIRAQYPDAILQPVV 67 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS-------------------HHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCceEEEEe
Confidence 56778888885 7899999999999997 57777642 235666777788887777776665
Q ss_pred cccc
Q 001356 185 TELT 188 (1093)
Q Consensus 185 ~~l~ 188 (1093)
.+++
T Consensus 68 ~D~~ 71 (267)
T 3t4x_A 68 ADLG 71 (267)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 5543
No 276
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=86.57 E-value=0.63 Score=49.18 Aligned_cols=61 Identities=21% Similarity=0.237 Sum_probs=42.4
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
+++++++|.|+ ||||.++++.|+..|. +++++|.+ ..+.+.+.+.++...+ +
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~------~v~~~~r~-------------------~~~~~~~~~~~~~~~~--~ 55 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA------TVVGTATS-------------------QASAEKFENSMKEKGF--K 55 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESS-------------------HHHHHHHHHHHHHTTC--C
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeCC-------------------HHHHHHHHHHHHhcCC--c
Confidence 45778999985 9999999999999997 78887743 2344455555655543 4
Q ss_pred EEEEecccC
Q 001356 582 TEALQIRAN 590 (1093)
Q Consensus 582 i~~~~~~v~ 590 (1093)
+..+..++.
T Consensus 56 ~~~~~~D~~ 64 (247)
T 3lyl_A 56 ARGLVLNIS 64 (247)
T ss_dssp EEEEECCTT
T ss_pred eEEEEecCC
Confidence 555555554
No 277
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=86.55 E-value=4.3 Score=47.61 Aligned_cols=32 Identities=25% Similarity=0.392 Sum_probs=28.9
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
.+|.|||+|.+|+.+|.+|+.+|. .++++|.+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~ 69 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESD 69 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 479999999999999999999997 78888864
No 278
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=86.54 E-value=0.61 Score=49.91 Aligned_cols=83 Identities=20% Similarity=0.284 Sum_probs=51.9
Q ss_pred HhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
|.+++++|.| .||||.++++.|+..|. +++++|.+ ..+.+.+++.++...+ +
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~~~~~~~--~ 62 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGA------SVVVTDLK-------------------SEGAEAVAAAIRQAGG--K 62 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTC------EEEEEESS-------------------HHHHHHHHHHHHHTTC--C
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC-------------------HHHHHHHHHHHHhcCC--c
Confidence 5678899998 49999999999999998 78888742 2244555556655543 4
Q ss_pred EEEEecccCcccc--ccch--hhhhccCCEEEEcc
Q 001356 582 TEALQIRANPETE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 582 i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~al 612 (1093)
+..+..++.+... ..+. .+-+...|++|++.
T Consensus 63 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nA 97 (256)
T 3gaf_A 63 AIGLECNVTDEQHREAVIKAALDQFGKITVLVNNA 97 (256)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 5556555553221 1110 01234677777653
No 279
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=86.54 E-value=2 Score=44.13 Aligned_cols=92 Identities=21% Similarity=0.109 Sum_probs=57.8
Q ss_pred eEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecccc
Q 001356 110 NILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTELT 188 (1093)
Q Consensus 110 ~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l~ 188 (1093)
+|+|.|+ |++|.++++.|+..|. ++++++.+.- +.. .+ ..+.++ ....+++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~-------------------~~~----~~--~~~~~~--~~~~D~~ 53 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQ-------------------KAA----DR--LGATVA--TLVKEPL 53 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHH-------------------HHH----HH--TCTTSE--EEECCGG
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEeccc-------------------ccc----cc--cCCCce--EEecccc
Confidence 6999997 7899999999999995 6777664211 111 11 123333 3344443
Q ss_pred h---hhhcCCceEEEecCC----------HHHHHHHHHHHHhcCCCcceEeeeecc
Q 001356 189 K---EKLSDFQAVVFTDIS----------LEKAVEFDDYCHNHQPPIAFIKSEVRG 231 (1093)
Q Consensus 189 ~---~~l~~~dvVV~~~~~----------~~~~~~ln~~c~~~~~~ip~I~~~~~G 231 (1093)
+ +.+.++|+||.+... ......+-+.|++.+ ..+|..++.|
T Consensus 54 d~~~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~ 107 (224)
T 3h2s_A 54 VLTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSD--TLAVFILGSA 107 (224)
T ss_dssp GCCHHHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCC--CEEEEECCGG
T ss_pred cccHhhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcC--CcEEEEecce
Confidence 2 467789999976532 334455666777777 5777766554
No 280
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=86.52 E-value=1.1 Score=47.96 Aligned_cols=62 Identities=19% Similarity=0.172 Sum_probs=43.2
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
+++++++|.|+ ||||.++++.|+..|. +++++|.+. .+.+.+++.++... .+
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~--~~ 57 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF------TVFAGRRNG-------------------EKLAPLVAEIEAAG--GR 57 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC------EEEEEESSG-------------------GGGHHHHHHHHHTT--CE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHhcC--Ce
Confidence 56788999985 8999999999999997 788887431 23344555555543 35
Q ss_pred EEEEecccCc
Q 001356 582 TEALQIRANP 591 (1093)
Q Consensus 582 i~~~~~~v~~ 591 (1093)
+..+..++..
T Consensus 58 ~~~~~~Dv~~ 67 (252)
T 3h7a_A 58 IVARSLDARN 67 (252)
T ss_dssp EEEEECCTTC
T ss_pred EEEEECcCCC
Confidence 5666655553
No 281
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=86.50 E-value=1.1 Score=47.71 Aligned_cols=35 Identities=26% Similarity=0.308 Sum_probs=29.7
Q ss_pred HHhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 502 KLEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 502 ~L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.+.+++|+|.| .|+||.++++.|+..|. +++++|.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~------~V~~~~r 39 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKA------KVVVNYR 39 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEcC
Confidence 36678899998 59999999999999997 7888764
No 282
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=86.49 E-value=1 Score=49.90 Aligned_cols=37 Identities=19% Similarity=0.303 Sum_probs=31.8
Q ss_pred HhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCc
Q 001356 105 RLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGV 142 (1093)
Q Consensus 105 kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~ 142 (1093)
..+-.+|.|||+|.+|..+|++|+..|. .++++|.+.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 54 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTL 54 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 3344689999999999999999999997 789998754
No 283
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=86.48 E-value=1.3 Score=49.26 Aligned_cols=34 Identities=26% Similarity=0.613 Sum_probs=29.6
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.||.|||+|.+|..++..|+..|+. ++|+++|-|
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~----~ev~l~Di~ 40 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIA----DEIVLIDAN 40 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 5899999999999999999988862 689999843
No 284
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.44 E-value=0.88 Score=48.84 Aligned_cols=85 Identities=13% Similarity=0.190 Sum_probs=52.6
Q ss_pred HHhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCC
Q 001356 502 KLEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHL 580 (1093)
Q Consensus 502 ~L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~ 580 (1093)
.+.+++++|.| .||||.++++.|+..|. +++++|.+. .+.+.+++.+.+.. ..
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~-~~ 60 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGA------NVAVAGRST-------------------ADIDACVADLDQLG-SG 60 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHTTS-SS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHhhC-CC
Confidence 35678889988 59999999999999997 788887432 23444555555443 23
Q ss_pred EEEEEecccCcccc--ccch--hhhhccCCEEEEcc
Q 001356 581 NTEALQIRANPETE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 581 ~i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~al 612 (1093)
++..+..++..... ..++ .+-+...|++|++.
T Consensus 61 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnA 96 (262)
T 3pk0_A 61 KVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANA 96 (262)
T ss_dssp CEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred cEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 56666666654221 1110 01133677777653
No 285
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=86.43 E-value=2.7 Score=45.19 Aligned_cols=94 Identities=16% Similarity=0.177 Sum_probs=57.7
Q ss_pred eEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecccc
Q 001356 110 NILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTELT 188 (1093)
Q Consensus 110 ~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l~ 188 (1093)
+|+|.|+ |++|..+++.|...+-.+|++++.+.-....+ ..+. ++....+++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------------------------~~~~--v~~~~~D~~ 54 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------------------------WRGK--VSVRQLDYF 54 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------------------------GBTT--BEEEECCTT
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------------------------hhCC--CEEEEcCCC
Confidence 6999996 77999999999887334677766533211110 1122 333444443
Q ss_pred h-----hhhcCCceEEEecCC-------HHHHHHHHHHHHhcCCCcceEeeeecc
Q 001356 189 K-----EKLSDFQAVVFTDIS-------LEKAVEFDDYCHNHQPPIAFIKSEVRG 231 (1093)
Q Consensus 189 ~-----~~l~~~dvVV~~~~~-------~~~~~~ln~~c~~~~~~ip~I~~~~~G 231 (1093)
+ ..++++|+||.+... ......+-+.|++.+. ..||..++.|
T Consensus 55 d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv-~~iv~~Ss~~ 108 (289)
T 3e48_A 55 NQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGV-AHIIFIGYYA 108 (289)
T ss_dssp CHHHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTC-CEEEEEEESC
T ss_pred CHHHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCC-CEEEEEcccC
Confidence 2 356788999977542 2344567788888882 2577766644
No 286
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.43 E-value=1.5 Score=46.74 Aligned_cols=34 Identities=26% Similarity=0.513 Sum_probs=29.2
Q ss_pred hhcCeEEEEcC-C-hhHHHHHHHHHHhCCceEEEEeC
Q 001356 106 LFASNILISGM-Q-GLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 106 L~~s~VlIiG~-g-glGseiaKnLvlaGVg~itLvD~ 140 (1093)
|+.++|+|.|. | |+|.++++.|+..|.. +.++|.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~-V~~~~r 55 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGAD-VVISDY 55 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCE-EEEecC
Confidence 56789999998 6 8999999999999974 777764
No 287
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=86.41 E-value=1 Score=50.26 Aligned_cols=73 Identities=19% Similarity=0.180 Sum_probs=48.3
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCC---CcEEEEe
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNN---AVAISAL 183 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp---~V~V~~~ 183 (1093)
..+|.|||+|.+|..++-.|+..|. ++|.|+|-+. .|++..+..|.+..| .+++..
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~i~~- 66 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK-------------------EKAIGEAMDINHGLPFMGQMSLYA- 66 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC----------------------CCHHHHHHTTSCCCTTCEEEC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------HHHHHHHHHHHHhHHhcCCeEEEE-
Confidence 3689999999999999999999885 6799999642 112222233433323 344443
Q ss_pred ecccchhhhcCCceEEEecC
Q 001356 184 TTELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 184 ~~~l~~~~l~~~dvVV~~~~ 203 (1093)
. +.+-+++.|+||.+..
T Consensus 67 -~--~~~a~~~aDvVii~~g 83 (318)
T 1y6j_A 67 -G--DYSDVKDCDVIVVTAG 83 (318)
T ss_dssp ----CGGGGTTCSEEEECCC
T ss_pred -C--CHHHhCCCCEEEEcCC
Confidence 2 2445889999999865
No 288
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=86.37 E-value=1 Score=48.55 Aligned_cols=82 Identities=17% Similarity=0.287 Sum_probs=51.1
Q ss_pred hcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEE
Q 001356 504 EEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNT 582 (1093)
Q Consensus 504 ~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i 582 (1093)
++++++|.|+ ||||.++++.|+..|. +++++|.+ ..+.+.+++.+.... .++
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~--~~~ 55 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGA------KILLGARR-------------------QARIEAIATEIRDAG--GTA 55 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESS-------------------HHHHHHHHHHHHHTT--CEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC------EEEEEECC-------------------HHHHHHHHHHHHhcC--CcE
Confidence 4678888885 8999999999999997 78888743 134455555565543 355
Q ss_pred EEEecccCcccc--ccch--hhhhccCCEEEEcc
Q 001356 583 EALQIRANPETE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 583 ~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~al 612 (1093)
..+..++..... ..+. .+-+...|++|++.
T Consensus 56 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnA 89 (264)
T 3tfo_A 56 LAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNA 89 (264)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 566656653221 1111 11234677777663
No 289
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=86.24 E-value=1.1 Score=47.44 Aligned_cols=77 Identities=22% Similarity=0.274 Sum_probs=51.6
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcce-EEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEE
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKL-TITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEA 584 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i-~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~ 584 (1093)
.||.|||+|.+|..++++|...|+ .+ .+.|.+. ...+ .
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~------~lv~v~d~~~----~~~~-------------------------------~ 39 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGF------EIAAILDVRG----EHEK-------------------------------M 39 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEEECSSC----CCTT-------------------------------E
T ss_pred CEEEEECCCHHHHHHHHHHhcCCC------EEEEEEecCc----chhh-------------------------------h
Confidence 379999999999999999998777 55 6777552 1110 1
Q ss_pred EecccCccccccchhhhh-ccCCEEEEccCCHHHHHHHhhcccccccceEe
Q 001356 585 LQIRANPETENVFNDTFW-ENLNVVVNALDNVNARLYIDQRCLYFQKPLLE 634 (1093)
Q Consensus 585 ~~~~v~~~~~~~~~~~f~-~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~ 634 (1093)
+ .+. .+++ .+.|+|+.|+-+.....++ ..|...+++++.
T Consensus 40 ~-----~~~-----~~l~~~~~DvVv~~~~~~~~~~~~-~~~l~~G~~vv~ 79 (236)
T 2dc1_A 40 V-----RGI-----DEFLQREMDVAVEAASQQAVKDYA-EKILKAGIDLIV 79 (236)
T ss_dssp E-----SSH-----HHHTTSCCSEEEECSCHHHHHHHH-HHHHHTTCEEEE
T ss_pred c-----CCH-----HHHhcCCCCEEEECCCHHHHHHHH-HHHHHCCCcEEE
Confidence 1 111 2334 5789999999877555554 456666777664
No 290
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=86.21 E-value=1.4 Score=51.94 Aligned_cols=36 Identities=19% Similarity=0.366 Sum_probs=29.3
Q ss_pred HHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 501 KKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 501 ~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
..+.+++|.|||+|.+|+.++++|+..|. +++++|.
T Consensus 11 ~~~~~~~IgvIGlG~MG~~lA~~La~~G~------~V~v~~r 46 (480)
T 2zyd_A 11 HHMSKQQIGVVGMAVMGRNLALNIESRGY------TVSIFNR 46 (480)
T ss_dssp ----CBSEEEECCSHHHHHHHHHHHTTTC------CEEEECS
T ss_pred cccCCCeEEEEccHHHHHHHHHHHHhCCC------eEEEEeC
Confidence 35678899999999999999999999997 7888763
No 291
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=86.21 E-value=2 Score=46.73 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=48.5
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeeccc
Q 001356 109 SNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTEL 187 (1093)
Q Consensus 109 s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l 187 (1093)
.+|.|||+ |.+|..++++|...|. +++++|.+. .+++ .+.+.. +.+ ..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~-------------------~~~~----~~~~~g--~~~----~~- 60 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAP-------------------EGRD----RLQGMG--IPL----TD- 60 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSH-------------------HHHH----HHHHTT--CCC----CC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCH-------------------HHHH----HHHhcC--CCc----CC-
Confidence 48999999 9999999999999996 677877421 1222 222221 221 11
Q ss_pred chhhhcCCceEEEecCCHHHHHHHHHH
Q 001356 188 TKEKLSDFQAVVFTDISLEKAVEFDDY 214 (1093)
Q Consensus 188 ~~~~l~~~dvVV~~~~~~~~~~~ln~~ 214 (1093)
..+.+.++|+||.|..+......+.++
T Consensus 61 ~~~~~~~aDvVi~av~~~~~~~v~~~l 87 (286)
T 3c24_A 61 GDGWIDEADVVVLALPDNIIEKVAEDI 87 (286)
T ss_dssp SSGGGGTCSEEEECSCHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEcCCchHHHHHHHHH
Confidence 234677899999998655443333333
No 292
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=86.15 E-value=0.88 Score=49.14 Aligned_cols=83 Identities=12% Similarity=0.180 Sum_probs=55.7
Q ss_pred HHhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCC
Q 001356 502 KLEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHL 580 (1093)
Q Consensus 502 ~L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~ 580 (1093)
.|+++.++|-| .+|||-++++.|+..|. ++.++|.+ +.+.+.+++.++....
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga------~Vv~~~~~-------------------~~~~~~~~~~i~~~g~-- 56 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS------IVVAVELL-------------------EDRLNQIVQELRGMGK-- 56 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHHTTC--
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC------EEEEEECC-------------------HHHHHHHHHHHHhcCC--
Confidence 57888999998 58999999999999997 88888732 2356666777776554
Q ss_pred EEEEEecccCcccc--ccch--hhhhccCCEEEEc
Q 001356 581 NTEALQIRANPETE--NVFN--DTFWENLNVVVNA 611 (1093)
Q Consensus 581 ~i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~a 611 (1093)
++..+..++....+ ..++ .+-|...|++||+
T Consensus 57 ~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNN 91 (254)
T 4fn4_A 57 EVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNN 91 (254)
T ss_dssp CEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 45666666654321 1111 1224566776665
No 293
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=86.06 E-value=1.5 Score=47.15 Aligned_cols=96 Identities=15% Similarity=0.082 Sum_probs=55.8
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHL 580 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~ 580 (1093)
.|.+++|+|.|+ ||||.++++.|+..|. +++++|.+.-. ..+.. . .-...+.+.+++.+....+
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~~~~-~~~~~----~--~~~~~~~~~~~~~~~~~~~-- 74 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGA------DIIAVDLCDQI-ASVPY----P--LATPEELAATVKLVEDIGS-- 74 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECCSCC-TTCSS----C--CCCHHHHHHHHHHHHHHTC--
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC------eEEEEeccccc-ccccc----c--ccchHHHHHHHHHHHhcCC--
Confidence 467889999985 8999999999999998 78888854210 00000 0 0012344445555555554
Q ss_pred EEEEEecccCcccc--ccch--hhhhccCCEEEEcc
Q 001356 581 NTEALQIRANPETE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 581 ~i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~al 612 (1093)
++..+..++..... ..+. .+-+...|++|++.
T Consensus 75 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nA 110 (278)
T 3sx2_A 75 RIVARQADVRDRESLSAALQAGLDELGRLDIVVANA 110 (278)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 56666666664221 1111 01134678777764
No 294
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=86.02 E-value=4.2 Score=43.81 Aligned_cols=81 Identities=20% Similarity=0.147 Sum_probs=50.4
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCc-eEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeeccc
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVK-SVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTEL 187 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg-~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l 187 (1093)
.+|.|||+|.+|..+++.|...|.. +|+++|.+. .+++ .+.+.. +.... ..++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~-------------------~~~~----~~~~~g--~~~~~-~~~~ 55 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP-------------------ESIS----KAVDLG--IIDEG-TTSI 55 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH-------------------HHHH----HHHHTT--SCSEE-ESCG
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH-------------------HHHH----HHHHCC--Ccccc-cCCH
Confidence 4799999999999999999999963 688877532 1222 222222 11011 1122
Q ss_pred chhhhc-CCceEEEecCCHHHHHHHHHHHH
Q 001356 188 TKEKLS-DFQAVVFTDISLEKAVEFDDYCH 216 (1093)
Q Consensus 188 ~~~~l~-~~dvVV~~~~~~~~~~~ln~~c~ 216 (1093)
++.+. ++|+||.|..+......+.++..
T Consensus 56 -~~~~~~~aDvVilavp~~~~~~v~~~l~~ 84 (281)
T 2g5c_A 56 -AKVEDFSPDFVMLSSPVRTFREIAKKLSY 84 (281)
T ss_dssp -GGGGGTCCSEEEECSCHHHHHHHHHHHHH
T ss_pred -HHHhcCCCCEEEEcCCHHHHHHHHHHHHh
Confidence 24677 89999999866555444554433
No 295
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=86.02 E-value=1.7 Score=51.36 Aligned_cols=37 Identities=22% Similarity=0.368 Sum_probs=29.1
Q ss_pred HHHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeC
Q 001356 103 MRRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 103 q~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
...+.+++|.|||+|..|+.+|.+|+..|. .|+++|.
T Consensus 10 ~~~~~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~~r 46 (480)
T 2zyd_A 10 HHHMSKQQIGVVGMAVMGRNLALNIESRGY-TVSIFNR 46 (480)
T ss_dssp -----CBSEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred ccccCCCeEEEEccHHHHHHHHHHHHhCCC-eEEEEeC
Confidence 356788999999999999999999999997 5777764
No 296
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=85.99 E-value=0.78 Score=50.96 Aligned_cols=72 Identities=10% Similarity=0.090 Sum_probs=49.0
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHh-CCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEee
Q 001356 106 LFASNILISGMQGLGAEIAKNLILA-GVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALT 184 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvla-GVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~ 184 (1093)
....+|.|||+|..|..++++|... |+.+++++|.+ ..|++.+++.+ .. .+....
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~-------------------~~~~~~l~~~~---~~--~~~~~~ 188 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRT-------------------KENAEKFADTV---QG--EVRVCS 188 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSS-------------------HHHHHHHHHHS---SS--CCEECS
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCC-------------------HHHHHHHHHHh---hC--CeEEeC
Confidence 4567899999999999999999988 88899998752 12444433332 11 122211
Q ss_pred cccchhhhcCCceEEEecC
Q 001356 185 TELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 185 ~~l~~~~l~~~dvVV~~~~ 203 (1093)
+ .++.+.+.|+|+.|..
T Consensus 189 -~-~~e~v~~aDiVi~atp 205 (312)
T 2i99_A 189 -S-VQEAVAGADVIITVTL 205 (312)
T ss_dssp -S-HHHHHTTCSEEEECCC
T ss_pred -C-HHHHHhcCCEEEEEeC
Confidence 1 2356778999998874
No 297
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=85.99 E-value=1.5 Score=47.66 Aligned_cols=90 Identities=13% Similarity=0.182 Sum_probs=55.2
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
+++++++|.|+ ||||.++++.|+..|. +++++|.+.-....+. .+.+.+++.+....+ +
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~------~V~~~~r~~~~~~~~~------------~~~~~~~~~~~~~~~--~ 66 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGA------NVALVAKSAEPHPKLP------------GTIYTAAKEIEEAGG--Q 66 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTC------EEEEEESCCSCCSSSC------------CCHHHHHHHHHHHTS--E
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEECChhhhhhhh------------HHHHHHHHHHHhcCC--c
Confidence 56788999985 8999999999999997 8888886543222211 123444555555543 5
Q ss_pred EEEEecccCcccc--ccch--hhhhccCCEEEEcc
Q 001356 582 TEALQIRANPETE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 582 i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~al 612 (1093)
+..+..++..... ..+. .+-+...|++|++.
T Consensus 67 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnA 101 (285)
T 3sc4_A 67 ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNA 101 (285)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 6666666654221 1111 01234678777763
No 298
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=85.95 E-value=1.1 Score=48.62 Aligned_cols=36 Identities=25% Similarity=0.301 Sum_probs=31.4
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
+|.+++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~------~V~~~~~~ 44 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGA------DIIAVDIC 44 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC------eEEEEecc
Confidence 467789999985 8999999999999998 89998865
No 299
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=85.87 E-value=1.3 Score=50.07 Aligned_cols=37 Identities=35% Similarity=0.644 Sum_probs=30.3
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.+..++|+|.|+ |.||..+++.|+..|. -+++++|..
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-----~~V~~~~r~ 66 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGV-----NQVHVVDNL 66 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC-----SEEEEECCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCC-----ceEEEEECC
Confidence 356789999996 9999999999999982 278887743
No 300
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=85.87 E-value=1.4 Score=49.41 Aligned_cols=33 Identities=27% Similarity=0.300 Sum_probs=29.6
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.||.|||+|.+|..++..|+..|. ..++++|.|
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~-----~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALREL-----ADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-----CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEECC
Confidence 589999999999999999999987 469999854
No 301
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=85.81 E-value=0.8 Score=49.77 Aligned_cols=85 Identities=13% Similarity=0.158 Sum_probs=52.5
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHL 580 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~ 580 (1093)
.+.+++++|.|+ ||||.++++.|+..|. +++++|.. ...+.+.+++.+....+
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~~~------------------~~~~~~~~~~~~~~~~~-- 79 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGF------DIAITGIG------------------DAEGVAPVIAELSGLGA-- 79 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC------------------CHHHHHHHHHHHHHTTC--
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCC------eEEEEeCC------------------CHHHHHHHHHHHHhcCC--
Confidence 456778999985 8999999999999997 78888731 01234445555555443
Q ss_pred EEEEEecccCcccc--ccch--hhhhccCCEEEEcc
Q 001356 581 NTEALQIRANPETE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 581 ~i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~al 612 (1093)
++..+..++.+... ..++ .+-+...|++|++.
T Consensus 80 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnA 115 (280)
T 4da9_A 80 RVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNA 115 (280)
T ss_dssp CEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEEC
T ss_pred cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 55666666654321 1111 01133677777653
No 302
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=85.78 E-value=2.4 Score=45.67 Aligned_cols=63 Identities=19% Similarity=0.254 Sum_probs=42.2
Q ss_pred HhhcCeEEEEc-CChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEe
Q 001356 105 RLFASNILISG-MQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISAL 183 (1093)
Q Consensus 105 kL~~s~VlIiG-~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~ 183 (1093)
.|..++|+|.| .||+|.++++.|+..|. +|.++|.+. .+.+.+.+.+.+......+..+
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~ 88 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTV-------------------GNIEELAAECKSAGYPGTLIPY 88 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHHTTCSSEEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCh-------------------HHHHHHHHHHHhcCCCceEEEE
Confidence 36678899998 56799999999999997 577766421 2444555566655544455554
Q ss_pred eccc
Q 001356 184 TTEL 187 (1093)
Q Consensus 184 ~~~l 187 (1093)
..++
T Consensus 89 ~~Dl 92 (279)
T 1xg5_A 89 RCDL 92 (279)
T ss_dssp ECCT
T ss_pred EecC
Confidence 4444
No 303
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=85.76 E-value=1.2 Score=48.37 Aligned_cols=39 Identities=21% Similarity=0.269 Sum_probs=32.3
Q ss_pred HHHHHHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 498 KLQKKLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 498 ~~q~~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.....|++++++|.|+ ||||.++++.|+..|. +++++|.
T Consensus 26 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~------~V~~~~r 65 (275)
T 4imr_A 26 ETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGA------HVILHGV 65 (275)
T ss_dssp HHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred cccCCCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEcC
Confidence 3444577889999985 8999999999999997 7888874
No 304
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=85.76 E-value=0.48 Score=52.08 Aligned_cols=34 Identities=18% Similarity=0.205 Sum_probs=31.7
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEec
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITD 541 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD 541 (1093)
+.+++++|+|+||.|..++..|+..|+ ++|+|++
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~-----~~v~v~n 153 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFA-----KDIYVVT 153 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTC-----SEEEEEE
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCC-----CEEEEEe
Confidence 567899999999999999999999999 8999986
No 305
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=85.75 E-value=0.63 Score=50.14 Aligned_cols=35 Identities=31% Similarity=0.529 Sum_probs=29.6
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
++.+++|+|.|+ ||||.++++.|+..|. ++++++.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~------~V~~~~r 61 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGL------KVWINYR 61 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 356788999985 8999999999999998 7887764
No 306
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=85.71 E-value=0.93 Score=49.47 Aligned_cols=98 Identities=17% Similarity=0.258 Sum_probs=0.0
Q ss_pred hcCcEEEEcc-CcchHHHHHHHH-HcccccCCCcceE-EecCC--ccccccCCcccccccCccccchHHHHHHHHHHhCC
Q 001356 504 EEAKVFVVGS-GALGCEFLKNLA-LMGVSCGNQGKLT-ITDDD--VIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINP 578 (1093)
Q Consensus 504 ~~~~VlivG~-GgiG~e~lknLa-~~Gv~~~~~g~i~-liD~D--~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np 578 (1093)
+..||+|+|| |.+|..+++.+. .-|+ +|+ ++|.+ ...-.++....-....++-
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~------elva~~d~~~~~~~g~d~~~~~g~~~~~v~---------------- 61 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGV------QLGAALEREGSSLLGSDAGELAGAGKTGVT---------------- 61 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTE------ECCCEECCTTCTTCSCCTTCSSSSSCCSCC----------------
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCC------EEEEEEecCchhhhhhhHHHHcCCCcCCce----------------
Q ss_pred CCEEEEEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceEeccccCc
Q 001356 579 HLNTEALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLESGTLGA 640 (1093)
Q Consensus 579 ~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~sgt~G~ 640 (1093)
....+ .+.+..+|+||+++ .+.+-..+-..|.+.++|++ .|+.|+
T Consensus 62 -------------~~~dl--~~~l~~~DvVIDft-~p~~~~~~~~~a~~~G~~vV-igTtG~ 106 (273)
T 1dih_A 62 -------------VQSSL--DAVKDDFDVFIDFT-RPEGTLNHLAFCRQHGKGMV-IGTTGF 106 (273)
T ss_dssp -------------EESCS--TTTTTSCSEEEECS-CHHHHHHHHHHHHHTTCEEE-ECCCCC
T ss_pred -------------ecCCH--HHHhcCCCEEEEcC-ChHHHHHHHHHHHhCCCCEE-EECCCC
No 307
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=85.71 E-value=3.4 Score=49.54 Aligned_cols=85 Identities=16% Similarity=0.114 Sum_probs=60.8
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeec-cc
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTT-EL 187 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~-~l 187 (1093)
.+|+|+|+|-+|..+|+.|...|. .++++|.+.-....+. +.+...+... .+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~--------------------------~~i~gD~t~~~~L 401 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV-PFILIDRQESPVCNDH--------------------------VVVYGDATVGQTL 401 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCCSSCCSS--------------------------CEEESCSSSSTHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC-CEEEEECChHHHhhcC--------------------------CEEEeCCCCHHHH
Confidence 899999999999999999999997 6889987653322221 1111111111 12
Q ss_pred chhhhcCCceEEEecCCHHHHHHHHHHHHhcCC
Q 001356 188 TKEKLSDFQAVVFTDISLEKAVEFDDYCHNHQP 220 (1093)
Q Consensus 188 ~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~ 220 (1093)
.+.-+.++|.||++.++.+.-..+...+++.++
T Consensus 402 ~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~ 434 (565)
T 4gx0_A 402 RQAGIDRASGIIVTTNDDSTNIFLTLACRHLHS 434 (565)
T ss_dssp HHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCS
T ss_pred HhcCccccCEEEEECCCchHHHHHHHHHHHHCC
Confidence 234577899999999888888888899999984
No 308
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=85.70 E-value=1.3 Score=47.41 Aligned_cols=36 Identities=28% Similarity=0.482 Sum_probs=30.7
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.+.+++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 41 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGA------TVAIADID 41 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 466788999984 9999999999999997 78888743
No 309
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=85.70 E-value=1.5 Score=48.94 Aligned_cols=35 Identities=26% Similarity=0.284 Sum_probs=31.3
Q ss_pred hcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 504 EEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 504 ~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
+..||.|||+|.+|+.++..|+..|+ ++++++|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~-----~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKEL-----ADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEecc
Confidence 35689999999999999999999998 799999854
No 310
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=85.69 E-value=0.85 Score=49.34 Aligned_cols=35 Identities=29% Similarity=0.473 Sum_probs=29.8
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.|.+++++|.|+ ||||.++++.|+..|. +++++|.
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~------~V~~~~r 58 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGA------RILINGT 58 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEECCS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 367788999985 8999999999999997 7888764
No 311
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=85.67 E-value=2 Score=47.84 Aligned_cols=34 Identities=26% Similarity=0.420 Sum_probs=29.7
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
+||.|||+|.+|+.++..|+..|+. .+|+++|-+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~----~el~l~D~~ 34 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVA----KEVVMVDIK 34 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCS----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCc
Confidence 4799999999999999999999973 589999843
No 312
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=85.67 E-value=2.4 Score=45.33 Aligned_cols=62 Identities=19% Similarity=0.269 Sum_probs=44.6
Q ss_pred hhcCeEEEEc-CChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEee
Q 001356 106 LFASNILISG-MQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALT 184 (1093)
Q Consensus 106 L~~s~VlIiG-~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~ 184 (1093)
|+++.|+|.| .||+|.++|+.|+..|. ++.++|.+ ..+.+.+.+.+.+..+..++..+.
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 65 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARD-------------------GERLRAAESALRQRFPGARLFASV 65 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHHhcCCceEEEEe
Confidence 5678899998 56899999999999998 47777642 235566677777766665555544
Q ss_pred ccc
Q 001356 185 TEL 187 (1093)
Q Consensus 185 ~~l 187 (1093)
.++
T Consensus 66 ~Dv 68 (265)
T 3lf2_A 66 CDV 68 (265)
T ss_dssp CCT
T ss_pred CCC
Confidence 443
No 313
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=85.63 E-value=0.99 Score=48.14 Aligned_cols=64 Identities=16% Similarity=0.138 Sum_probs=46.2
Q ss_pred HhcCcEEEEc-cCcchHHHHHHHHH---cccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCC
Q 001356 503 LEEAKVFVVG-SGALGCEFLKNLAL---MGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINP 578 (1093)
Q Consensus 503 L~~~~VlivG-~GgiG~e~lknLa~---~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np 578 (1093)
|.+++++|.| .||||.++++.|+. .|. +++++|.+. .+.+.+++.+...+|
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~~ 58 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS------VMLVSARSE-------------------SMLRQLKEELGAQQP 58 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC------EEEEEESCH-------------------HHHHHHHHHHHHHCT
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC------eEEEEeCCH-------------------HHHHHHHHHHHhhCC
Confidence 4566788888 58999999999999 787 788886321 244455666666666
Q ss_pred CCEEEEEecccCc
Q 001356 579 HLNTEALQIRANP 591 (1093)
Q Consensus 579 ~~~i~~~~~~v~~ 591 (1093)
..++..+..++..
T Consensus 59 ~~~~~~~~~Dv~~ 71 (259)
T 1oaa_A 59 DLKVVLAAADLGT 71 (259)
T ss_dssp TSEEEEEECCTTS
T ss_pred CCeEEEEecCCCC
Confidence 6677777766664
No 314
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=85.59 E-value=0.5 Score=47.29 Aligned_cols=32 Identities=34% Similarity=0.422 Sum_probs=29.4
Q ss_pred cEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCc
Q 001356 507 KVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDV 544 (1093)
Q Consensus 507 ~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~ 544 (1093)
+|+|||+|.+|++++..|++.|. +++|+|...
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~------~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGL------KVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC------CEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCC------cEEEEeCCC
Confidence 79999999999999999999997 899999754
No 315
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=85.58 E-value=1.7 Score=49.02 Aligned_cols=36 Identities=22% Similarity=0.358 Sum_probs=32.0
Q ss_pred HHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 502 KLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 502 ~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.|.+++|.|||+|.||..+++.|...|+ +++.+|..
T Consensus 145 ~l~gktvgIiGlG~IG~~vA~~l~~~G~------~V~~~d~~ 180 (343)
T 2yq5_A 145 EIYNLTVGLIGVGHIGSAVAEIFSAMGA------KVIAYDVA 180 (343)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred ccCCCeEEEEecCHHHHHHHHHHhhCCC------EEEEECCC
Confidence 4677899999999999999999999987 88888864
No 316
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=85.57 E-value=1 Score=49.81 Aligned_cols=32 Identities=25% Similarity=0.498 Sum_probs=27.8
Q ss_pred cCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 505 EAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 505 ~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+++|+|.| .|+||..+++.|+..|. +++++|.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~------~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGY------DVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTC------EEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCC------cEEEEec
Confidence 46899999 59999999999999997 7888774
No 317
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=85.56 E-value=1 Score=48.41 Aligned_cols=86 Identities=16% Similarity=0.258 Sum_probs=52.6
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
+.+++++|.|+ ||||.++++.|+..|. +++++|.. +....+.+.+++.++... .+
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~------~V~~~~r~----------------~~~~~~~~~~~~~~~~~~--~~ 64 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESV------NLVLHYHQ----------------AKDSDTANKLKDELEDQG--AK 64 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSC------EEEEEESC----------------GGGHHHHHHHHHHHHTTT--CE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEecC----------------ccCHHHHHHHHHHHHhcC--Cc
Confidence 56788999985 9999999999999997 77777632 112234445555555443 46
Q ss_pred EEEEecccCcccc--ccch--hhhhccCCEEEEcc
Q 001356 582 TEALQIRANPETE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 582 i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~al 612 (1093)
+..+..++..... ..++ .+-+...|++|++.
T Consensus 65 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnA 99 (262)
T 3ksu_A 65 VALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTV 99 (262)
T ss_dssp EEEEECCCCSHHHHHHHHHHHHHHHCSEEEEEECC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 6666666654221 1111 01134677777654
No 318
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=85.56 E-value=3.6 Score=45.70 Aligned_cols=37 Identities=14% Similarity=0.036 Sum_probs=30.7
Q ss_pred HHhhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 104 RRLFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 104 ~kL~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
..|...+|||.|+ |++|..+++.|...|. +|++++..
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 42 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLT 42 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCC
Confidence 3567789999995 7799999999999996 78887753
No 319
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=85.54 E-value=1.4 Score=46.39 Aligned_cols=34 Identities=24% Similarity=0.414 Sum_probs=29.2
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+.+++|+|.|+ |+||.++++.|+..|. +++++|.
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~------~V~~~~r 39 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGA------KVGLHGR 39 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEECC
Confidence 56788999985 9999999999999997 7888764
No 320
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=85.54 E-value=0.8 Score=49.88 Aligned_cols=36 Identities=25% Similarity=0.351 Sum_probs=30.4
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.|.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~------~V~~~~r~ 41 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGA------KVVVTARN 41 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEECCSC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 366788899885 8999999999999997 78888744
No 321
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=85.53 E-value=2.1 Score=46.53 Aligned_cols=31 Identities=23% Similarity=0.419 Sum_probs=26.5
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeC
Q 001356 109 SNILISGM-QGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 109 s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
.+|||.|+ |++|..+++.|...|. +|+++|.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY-EVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-EEEEEeC
Confidence 37999998 7799999999999996 6777764
No 322
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=85.44 E-value=1.6 Score=46.57 Aligned_cols=34 Identities=26% Similarity=0.463 Sum_probs=29.2
Q ss_pred HhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+.+++|+|.| .||||.++++.|+..|. +++++|.
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~------~V~~~~r 41 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA------SVYTCSR 41 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 5677899998 48999999999999997 7888874
No 323
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=85.42 E-value=1.2 Score=47.65 Aligned_cols=37 Identities=16% Similarity=0.258 Sum_probs=29.1
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
..+|.|||+|.+|+.+++.|+..|+. +..+++++|.+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~--~~~~v~~~~~~ 40 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANII--KKENLFYYGPS 40 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSS--CGGGEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCC--CCCeEEEEeCC
Confidence 35899999999999999999999830 00278888754
No 324
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=85.41 E-value=1.2 Score=47.42 Aligned_cols=35 Identities=20% Similarity=0.385 Sum_probs=29.9
Q ss_pred HHhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 502 KLEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 502 ~L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.+.+++|+|.| .||||.++++.|+..|. +++++|.
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r 46 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGA------HVVVSSR 46 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 46678899998 59999999999999997 7888774
No 325
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=85.37 E-value=2.4 Score=46.73 Aligned_cols=104 Identities=15% Similarity=0.256 Sum_probs=60.4
Q ss_pred cCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHh-CCCcEEEEeec
Q 001356 108 ASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQEL-NNAVAISALTT 185 (1093)
Q Consensus 108 ~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eL-Np~V~V~~~~~ 185 (1093)
..+|||.|+ |++|.++++.|+..|. +++++|...-. .....+.+.+. .+. +..+..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~--~~~~~~ 62 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNS-------------------KREAIARIEKITGKT--PAFHET 62 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSS-------------------CTHHHHHHHHHHSCC--CEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcc-------------------hHHHHHHHHhhcCCC--ceEEEe
Confidence 468999985 7799999999999996 57776642210 01112233332 222 334444
Q ss_pred ccch-----hhhc--CCceEEEecC-----------------CHHHHHHHHHHHHhcCCCcceEeeeecceeE
Q 001356 186 ELTK-----EKLS--DFQAVVFTDI-----------------SLEKAVEFDDYCHNHQPPIAFIKSEVRGLFG 234 (1093)
Q Consensus 186 ~l~~-----~~l~--~~dvVV~~~~-----------------~~~~~~~ln~~c~~~~~~ip~I~~~~~G~~G 234 (1093)
++++ +.++ +.|+||.+.. +......+-+.|++.+. ..+|..++.+.+|
T Consensus 63 Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~iv~~SS~~~~g 134 (341)
T 3enk_A 63 DVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAV-KRIVFSSSATVYG 134 (341)
T ss_dssp CTTCHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CEEEEEEEGGGBC
T ss_pred ecCCHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCC-CEEEEEecceEec
Confidence 4432 2344 6788886542 11223455667888772 2678777766665
No 326
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=85.32 E-value=1.2 Score=51.40 Aligned_cols=112 Identities=13% Similarity=0.064 Sum_probs=63.5
Q ss_pred cCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCC-----
Q 001356 505 EAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINP----- 578 (1093)
Q Consensus 505 ~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np----- 578 (1093)
.++|+|.|+ |+||.++++.|+..|. ++++++.+. + .......+.+.+....+
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~R~~---------------~-~~~~~~~l~~~l~~~~~~~~~~ 126 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGYSH------RIYCFIRAD---------------N-EEIAWYKLMTNLNDYFSEETVE 126 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTTEE------EEEEEEECS---------------S-HHHHHHHHHHHHHHHSCHHHHH
T ss_pred CCEEEEecCCcHHHHHHHHHHHcCCC------EEEEEECCC---------------C-hHHHHHHHHHHHHHhccccccc
Confidence 348999996 9999999999988776 777765211 1 01112223333333321
Q ss_pred --CCEEEEEecccCccccccchhhhhccCCEEEEccCC--------------HHHHHHHhhcccccccceEeccccCccc
Q 001356 579 --HLNTEALQIRANPETENVFNDTFWENLNVVVNALDN--------------VNARLYIDQRCLYFQKPLLESGTLGAKC 642 (1093)
Q Consensus 579 --~~~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn--------------~~aR~~i~~~c~~~~~pli~sgt~G~~G 642 (1093)
.-+++.+..++.... . +. .+.++|+||++.-. +..-..+-+.|....+.+|..++.+. |
T Consensus 127 ~~~~~v~~v~~Dl~d~~-~-l~--~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G 201 (427)
T 4f6c_A 127 MMLSNIEVIVGDFECMD-D-VV--LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-G 201 (427)
T ss_dssp HHHTTEEEEEECC---C-C-CC--CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-G
T ss_pred cccCceEEEeCCCCCcc-c-CC--CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-C
Confidence 135666666665421 1 21 46789999987542 22234455566555566776666555 5
Q ss_pred c
Q 001356 643 N 643 (1093)
Q Consensus 643 ~ 643 (1093)
.
T Consensus 202 ~ 202 (427)
T 4f6c_A 202 T 202 (427)
T ss_dssp S
T ss_pred C
Confidence 3
No 327
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=85.29 E-value=1.1 Score=48.03 Aligned_cols=85 Identities=16% Similarity=0.310 Sum_probs=51.8
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHL 580 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~ 580 (1093)
+|.+++|+|.|+ ||||.++++.|+..|. +++++|.+ ..+.+.+++.+.+.. ..
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~-~~ 70 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGA------RLVLSGRD-------------------VSELDAARRALGEQF-GT 70 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHHHH-CC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC-------------------HHHHHHHHHHHHHhc-CC
Confidence 356788999985 8999999999999997 78888743 123444455554422 23
Q ss_pred EEEEEecccCcccc--ccch--hhhhccCCEEEEcc
Q 001356 581 NTEALQIRANPETE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 581 ~i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~al 612 (1093)
++..+..++..... ..++ .+-+...|++|++.
T Consensus 71 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA 106 (266)
T 4egf_A 71 DVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNA 106 (266)
T ss_dssp CEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEEC
T ss_pred cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 55666666654321 1110 01234677777653
No 328
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=85.28 E-value=0.56 Score=51.95 Aligned_cols=33 Identities=24% Similarity=0.319 Sum_probs=28.2
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
..||+|||+|++|+.++..|++.|. +++++|.+
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~------~V~~~~r~ 34 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGE------DVHFLLRR 34 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSC------CEEEECST
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC------eEEEEEcC
Confidence 3689999999999999999999986 78888754
No 329
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=85.25 E-value=2.3 Score=47.93 Aligned_cols=32 Identities=28% Similarity=0.246 Sum_probs=27.6
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 109 SNILISGM-QGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 109 s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
.+|||.|+ |++|..+++.|...|. +|+++|..
T Consensus 30 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 62 (379)
T 2c5a_A 30 LKISITGAGGFIASHIARRLKHEGH-YVIASDWK 62 (379)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CeEEEECCccHHHHHHHHHHHHCCC-eEEEEECC
Confidence 58999997 7799999999999995 78887764
No 330
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=85.23 E-value=1.2 Score=48.17 Aligned_cols=97 Identities=15% Similarity=0.118 Sum_probs=55.5
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHL 580 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~ 580 (1093)
.|.+++++|.|+ ||||.++++.|+..|. +++++|.+.-..+.+.+ ... ...+.+.+++.+...++
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~------~V~~~~r~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~-- 73 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA------DIIAVDIAGKLPSCVPY----DPA--SPDDLSETVRLVEAANR-- 73 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECCSCCCTTCCS----CCC--CHHHHHHHHHHHHHTTC--
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC------EEEEEeccccccccccc----ccc--CHHHHHHHHHHHHhcCC--
Confidence 467888999985 8999999999999998 88998864322221111 111 12334444455555443
Q ss_pred EEEEEecccCcccc--ccch--hhhhccCCEEEEcc
Q 001356 581 NTEALQIRANPETE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 581 ~i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~al 612 (1093)
++..+..++.+... ..++ .+-+...|++|++.
T Consensus 74 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnA 109 (277)
T 3tsc_A 74 RIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANA 109 (277)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 45566655553221 1111 01134577777653
No 331
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=85.22 E-value=2.2 Score=47.55 Aligned_cols=73 Identities=15% Similarity=0.028 Sum_probs=53.5
Q ss_pred hcCeEEEEcCChhHHHHHHHHHHh-CCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeec
Q 001356 107 FASNILISGMQGLGAEIAKNLILA-GVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTT 185 (1093)
Q Consensus 107 ~~s~VlIiG~gglGseiaKnLvla-GVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~ 185 (1093)
...+|+|||+|+.|..+++.|... ++.+++++|.+ ..|++..++++.+.. +.+. . .
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-------------------~~~a~~la~~~~~~~--~~~~-~-~ 180 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVR-------------------EKAAKKFVSYCEDRG--ISAS-V-Q 180 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSS-------------------HHHHHHHHHHHHHTT--CCEE-E-C
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCC-------------------HHHHHHHHHHHHhcC--ceEE-E-C
Confidence 467999999999999999999874 78999998752 347777777776532 3343 2 2
Q ss_pred ccchhhhcCCceEEEecCC
Q 001356 186 ELTKEKLSDFQAVVFTDIS 204 (1093)
Q Consensus 186 ~l~~~~l~~~dvVV~~~~~ 204 (1093)
++ ++.+ ++|+|+.|+.+
T Consensus 181 ~~-~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 181 PA-EEAS-RCDVLVTTTPS 197 (322)
T ss_dssp CH-HHHT-SSSEEEECCCC
T ss_pred CH-HHHh-CCCEEEEeeCC
Confidence 22 3456 89999999864
No 332
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=85.11 E-value=0.91 Score=48.65 Aligned_cols=34 Identities=26% Similarity=0.456 Sum_probs=28.8
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+.+++|+|.|+ ||||.++++.|+..|. +++++|.
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r 39 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGA------KVALVDW 39 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC------EEEEEEC
Confidence 34678999985 9999999999999997 7888874
No 333
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=85.10 E-value=1.4 Score=47.95 Aligned_cols=33 Identities=33% Similarity=0.490 Sum_probs=29.4
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCc
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDEGV 142 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~ 142 (1093)
.+|.|||+|.+|..++++|...|. .++++|.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCH
Confidence 589999999999999999999995 788888653
No 334
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=85.08 E-value=1.2 Score=50.30 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=28.5
Q ss_pred cCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 505 EAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 505 ~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.++|+|.|+ |.||..+++.|+..|. +++++|.+
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGH------YVIASDWK 62 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCC------eEEEEECC
Confidence 468999997 9999999999999986 78888754
No 335
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=85.06 E-value=1.5 Score=47.32 Aligned_cols=63 Identities=21% Similarity=0.307 Sum_probs=42.9
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
|.+++++|.|+ ||||.++++.|+..|. +++++|... ..+.+.+++.+....+ +
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~------~V~~~~~~~------------------~~~~~~~~~~l~~~~~--~ 82 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGA------AVALTYVNA------------------AERAQAVVSEIEQAGG--R 82 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESSC------------------HHHHHHHHHHHHHTTC--C
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCCC------------------HHHHHHHHHHHHhcCC--c
Confidence 56788999985 8999999999999997 777775321 1234455555655443 4
Q ss_pred EEEEecccCc
Q 001356 582 TEALQIRANP 591 (1093)
Q Consensus 582 i~~~~~~v~~ 591 (1093)
+..+..++..
T Consensus 83 ~~~~~~Dv~d 92 (271)
T 3v2g_A 83 AVAIRADNRD 92 (271)
T ss_dssp EEEEECCTTC
T ss_pred EEEEECCCCC
Confidence 5555555553
No 336
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=85.03 E-value=2.4 Score=45.28 Aligned_cols=74 Identities=15% Similarity=0.151 Sum_probs=46.4
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecccch
Q 001356 110 NILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTELTK 189 (1093)
Q Consensus 110 ~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l~~ 189 (1093)
+|.|||+|.+|..++++|...|. +++++|.. + ...++ +.+.+. .+. .+ ..
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~-~V~~~~~~--------~---------~~~~~----~~~~~~--g~~-----~~-~~ 51 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEG--------R---------SPSTI----ERARTV--GVT-----ET-SE 51 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEECCTT--------C---------CHHHH----HHHHHH--TCE-----EC-CH
T ss_pred eEEEEechHHHHHHHHHHHHCCC-eEEEeCCc--------c---------CHHHH----HHHHHC--CCc-----CC-HH
Confidence 69999999999999999999997 56665431 0 00112 233332 222 11 23
Q ss_pred hhhcCCceEEEecCCHHHHHHHHH
Q 001356 190 EKLSDFQAVVFTDISLEKAVEFDD 213 (1093)
Q Consensus 190 ~~l~~~dvVV~~~~~~~~~~~ln~ 213 (1093)
+.+.+.|+||.|..+......+.+
T Consensus 52 ~~~~~aDvvi~~v~~~~~~~~~~~ 75 (264)
T 1i36_A 52 EDVYSCPVVISAVTPGVALGAARR 75 (264)
T ss_dssp HHHHTSSEEEECSCGGGHHHHHHH
T ss_pred HHHhcCCEEEEECCCHHHHHHHHH
Confidence 567789999999876544433433
No 337
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=85.02 E-value=0.96 Score=50.87 Aligned_cols=33 Identities=12% Similarity=0.220 Sum_probs=27.7
Q ss_pred CcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 506 AKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 506 ~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
+||+|.| .|.||..+++.|+..|. -+++.+|.+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~-----~~v~~~d~~ 34 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTD-----HHIFEVHRQ 34 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-----CEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-----CEEEEECCC
Confidence 4799999 59999999999999985 477777754
No 338
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=84.96 E-value=1.1 Score=47.26 Aligned_cols=33 Identities=21% Similarity=0.449 Sum_probs=28.8
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEec
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITD 541 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD 541 (1093)
+.+++|+|.|+ |+||.++++.|+..|. +++++|
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~------~V~~~~ 42 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGA------SVVVSD 42 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTC------EEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC------EEEEEc
Confidence 56788999985 9999999999999997 788876
No 339
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=84.94 E-value=0.55 Score=50.14 Aligned_cols=38 Identities=29% Similarity=0.448 Sum_probs=30.5
Q ss_pred HHHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 500 QKKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 500 q~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
...+..++|.|||+|.+|..++++|+..|. ++++.|.+
T Consensus 14 ~~~~~~~kIgiIG~G~mG~alA~~L~~~G~------~V~~~~r~ 51 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVGRTMAGALADLGH------EVTIGTRD 51 (245)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 357889999999999999999999999997 78888854
No 340
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=84.92 E-value=2.2 Score=47.57 Aligned_cols=73 Identities=19% Similarity=0.233 Sum_probs=49.5
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhC---CCCEE
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALIN---PHLNT 582 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~n---p~~~i 582 (1093)
.||.|||+|.+|..++-.|+..|.. .+|+|+|-| ..|++..+..+.... +.+++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~----~el~L~Di~-------------------~~~~~g~~~dl~~~~~~~~~~~v 62 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIA----EEFVIVDVV-------------------KDRTKGDALDLEDAQAFTAPKKI 62 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSS-------------------HHHHHHHHHHHHGGGGGSCCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCC----CEEEEEeCC-------------------chHHHHHHHHHHHHHHhcCCeEE
Confidence 6899999999999999999998873 689999832 234443344444332 44455
Q ss_pred EEEecccCccccccchhhhhccCCEEEEccC
Q 001356 583 EALQIRANPETENVFNDTFWENLNVVVNALD 613 (1093)
Q Consensus 583 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~alD 613 (1093)
.+ +. .+-+++.|+||.+..
T Consensus 63 ~~-----~~-------~~a~~~aDvVii~ag 81 (318)
T 1ez4_A 63 YS-----GE-------YSDCKDADLVVITAG 81 (318)
T ss_dssp EE-----CC-------GGGGTTCSEEEECCC
T ss_pred EE-----CC-------HHHhCCCCEEEECCC
Confidence 43 11 123688999998864
No 341
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=84.92 E-value=1.6 Score=46.71 Aligned_cols=34 Identities=26% Similarity=0.438 Sum_probs=29.3
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+++++|+|.|+ ||||.++++.|+..|. +++++|.
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~G~------~V~~~~r 48 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRYGA------KVVIADI 48 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEcC
Confidence 56788999985 9999999999999997 7888763
No 342
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=84.82 E-value=1.7 Score=46.99 Aligned_cols=34 Identities=18% Similarity=0.408 Sum_probs=29.3
Q ss_pred HhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+.+++|+|.| .||||.++++.|+..|. +++++|.
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r 54 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGL------RVFVCAR 54 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeC
Confidence 5677899998 58999999999999997 7888874
No 343
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=84.82 E-value=0.53 Score=53.15 Aligned_cols=33 Identities=27% Similarity=0.429 Sum_probs=30.2
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
+.||+|||+|..|+.+|-.|++.|+ +++|+|-+
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~------~v~v~Er~ 33 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGI------KVTIYERN 33 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC------CEEEEecC
Confidence 4699999999999999999999999 89999854
No 344
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=84.78 E-value=2.4 Score=45.89 Aligned_cols=32 Identities=25% Similarity=0.360 Sum_probs=27.3
Q ss_pred eEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 110 NILISGM-QGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 110 ~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
+|||.|+ |.+|+++++.|...|...+++++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 33 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 33 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccC
Confidence 5899997 7799999999999996678887753
No 345
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=84.77 E-value=2.3 Score=46.67 Aligned_cols=35 Identities=14% Similarity=0.160 Sum_probs=27.8
Q ss_pred hcCeEEEEcC-ChhHHHHHHHHHHhCC-ceEEEEeCC
Q 001356 107 FASNILISGM-QGLGAEIAKNLILAGV-KSVTLHDEG 141 (1093)
Q Consensus 107 ~~s~VlIiG~-gglGseiaKnLvlaGV-g~itLvD~d 141 (1093)
.+.+|||.|+ |++|..+++.|+..|- -+++++|..
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~ 38 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKL 38 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 3457999995 7899999999999984 478887753
No 346
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=84.70 E-value=0.94 Score=50.25 Aligned_cols=74 Identities=16% Similarity=0.162 Sum_probs=48.9
Q ss_pred HHHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCC
Q 001356 501 KKLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPH 579 (1093)
Q Consensus 501 ~~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~ 579 (1093)
..+.+++|+|.|+ ||||.++++.|+..|. +++++|.+.- +.|. ..-...+.+.+++.+....+
T Consensus 23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~------~Vv~~~r~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~- 86 (322)
T 3qlj_A 23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGA------RVVVNDIGVG----LDGS-----PASGGSAAQSVVDEITAAGG- 86 (322)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEECCCBC----TTSS-----BTCTTSHHHHHHHHHHHTTC-
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCccc----cccc-----ccccHHHHHHHHHHHHhcCC-
Confidence 4577888999985 8999999999999997 8999886531 1111 11223455566666666543
Q ss_pred CEEEEEecccCc
Q 001356 580 LNTEALQIRANP 591 (1093)
Q Consensus 580 ~~i~~~~~~v~~ 591 (1093)
++..+..++..
T Consensus 87 -~~~~~~~Dv~d 97 (322)
T 3qlj_A 87 -EAVADGSNVAD 97 (322)
T ss_dssp -EEEEECCCTTS
T ss_pred -cEEEEECCCCC
Confidence 55566655553
No 347
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=84.65 E-value=1.8 Score=45.85 Aligned_cols=34 Identities=24% Similarity=0.384 Sum_probs=29.3
Q ss_pred HhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+.+++++|.| .||||.++++.|+..|. +++++|.
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~------~V~~~~r 39 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGA------AVAIAAR 39 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEEC
Confidence 5678899998 48999999999999997 7888763
No 348
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=84.64 E-value=0.4 Score=53.16 Aligned_cols=32 Identities=25% Similarity=0.182 Sum_probs=27.9
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
.+|+|||+|++|+.++..|..+|. .+++++.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcC
Confidence 589999999999999999999995 78888753
No 349
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=84.59 E-value=1.6 Score=47.64 Aligned_cols=23 Identities=22% Similarity=0.455 Sum_probs=19.9
Q ss_pred CcEEEEcc-CcchHHHHHHHHHcc
Q 001356 506 AKVFVVGS-GALGCEFLKNLALMG 528 (1093)
Q Consensus 506 ~~VlivG~-GgiG~e~lknLa~~G 528 (1093)
++|+|.|+ |.||..+++.|+..|
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g 25 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN 25 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS
T ss_pred CEEEEECCCchHHHHHHHHHHhCC
Confidence 47999995 999999999998776
No 350
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=84.59 E-value=1.4 Score=47.75 Aligned_cols=97 Identities=13% Similarity=0.138 Sum_probs=55.5
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHL 580 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~ 580 (1093)
.|++++++|.|+ ||||.++++.|+..|. +++++|.+.-....+. +.. -...+.+.+++.+.... .
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~------~V~~~~r~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~--~ 77 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA------DIIACDICAPVSASVT----YAP--ASPEDLDETARLVEDQG--R 77 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECCSCCCTTCC----SCC--CCHHHHHHHHHHHHTTT--C
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEecccccccccc----ccc--cCHHHHHHHHHHHHhcC--C
Confidence 467889999985 8999999999999998 8888885431111111 111 11234445555555543 3
Q ss_pred EEEEEecccCcccc--ccch--hhhhccCCEEEEcc
Q 001356 581 NTEALQIRANPETE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 581 ~i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~al 612 (1093)
++..+..++..... ..+. .+-+...|++|++.
T Consensus 78 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnA 113 (280)
T 3pgx_A 78 KALTRVLDVRDDAALRELVADGMEQFGRLDVVVANA 113 (280)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 55566656653221 1111 01134677777653
No 351
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=84.58 E-value=3.1 Score=45.78 Aligned_cols=31 Identities=26% Similarity=0.501 Sum_probs=25.9
Q ss_pred CeEEEEc-CChhHHHHHHHHHHhCCceEEEEeC
Q 001356 109 SNILISG-MQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 109 s~VlIiG-~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
++|||.| .|++|..+++.|+..|. +|+++|.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeC
Confidence 4799999 57799999999999995 6777764
No 352
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=84.56 E-value=1.4 Score=47.56 Aligned_cols=35 Identities=17% Similarity=0.351 Sum_probs=30.4
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.|++++++|.|+ ||||.++++.|+..|. +++++|.
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~------~V~~~~r 59 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGC------HTVIASR 59 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC------EEEEEES
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeC
Confidence 467889999985 7999999999999997 8888874
No 353
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=84.56 E-value=0.57 Score=52.08 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=29.5
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCc
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDV 544 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~ 544 (1093)
..||+|||+|++|+.++..|++.|. +++++|.+.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~------~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGH------CVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTC------EEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC------eEEEEeCCh
Confidence 3689999999999999999999986 889888543
No 354
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=84.55 E-value=3.2 Score=44.39 Aligned_cols=63 Identities=24% Similarity=0.300 Sum_probs=42.1
Q ss_pred HhhcCeEEEEc-CChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEe
Q 001356 105 RLFASNILISG-MQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISAL 183 (1093)
Q Consensus 105 kL~~s~VlIiG-~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~ 183 (1093)
.|.+++|+|.| .||+|.++++.|+..|. ++.++|.+ ..+.+.+.+.+.+..+..++..+
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 69 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVS-------------------SEGLEASKAAVLETAPDAEVLTT 69 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHHCTTCCEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhcCCceEEEE
Confidence 36678899998 56799999999999997 57776642 12445555666666544455544
Q ss_pred eccc
Q 001356 184 TTEL 187 (1093)
Q Consensus 184 ~~~l 187 (1093)
..++
T Consensus 70 ~~D~ 73 (267)
T 1iy8_A 70 VADV 73 (267)
T ss_dssp ECCT
T ss_pred EccC
Confidence 4443
No 355
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=84.51 E-value=1.4 Score=47.93 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=30.1
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.+.+++|+|.|+ |+||.++++.|+..|. +++++|.
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~------~V~~~~r 50 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGS------NVVIASR 50 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 467789999985 9999999999999997 7888764
No 356
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=84.46 E-value=0.53 Score=53.72 Aligned_cols=37 Identities=41% Similarity=0.549 Sum_probs=34.4
Q ss_pred HHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 502 KLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 502 ~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
+|...||+|+|+|..|..+++.|..+|+ ++|+++|.+
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~-----~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGV-----KNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEECC
Confidence 5678899999999999999999999999 899999965
No 357
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=84.46 E-value=0.86 Score=51.61 Aligned_cols=76 Identities=11% Similarity=0.145 Sum_probs=50.7
Q ss_pred hcCcEEEEccCcchHHHHHHHHH-cccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEE
Q 001356 504 EEAKVFVVGSGALGCEFLKNLAL-MGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNT 582 (1093)
Q Consensus 504 ~~~~VlivG~GgiG~e~lknLa~-~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i 582 (1093)
...+|+|||+|+.|..+++.|.. .++ .+++++|.+ ..|++.+++.+.. .+.+.+
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~-----~~V~V~~r~-------------------~~~a~~la~~~~~-~~g~~~ 182 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGI-----EEIVAYDTD-------------------PLATAKLIANLKE-YSGLTI 182 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCC-----CEEEEECSS-------------------HHHHHHHHHHHTT-CTTCEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCC-----cEEEEEcCC-------------------HHHHHHHHHHHHh-ccCceE
Confidence 46799999999999999998865 466 788887632 3355556655533 134444
Q ss_pred EEEecccCccccccchhhhhccCCEEEEccCC
Q 001356 583 EALQIRANPETENVFNDTFWENLNVVVNALDN 614 (1093)
Q Consensus 583 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn 614 (1093)
..+. +. .+.+++.|+||.|+-+
T Consensus 183 ~~~~-----~~-----~eav~~aDiVi~aTps 204 (350)
T 1x7d_A 183 RRAS-----SV-----AEAVKGVDIITTVTAD 204 (350)
T ss_dssp EECS-----SH-----HHHHTTCSEEEECCCC
T ss_pred EEeC-----CH-----HHHHhcCCEEEEeccC
Confidence 3321 11 2456789999999865
No 358
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=84.42 E-value=1.3 Score=52.45 Aligned_cols=116 Identities=16% Similarity=0.173 Sum_probs=63.9
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccch--HHHHHHHHHHHh-CCCcEEEEee
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKN--RALASIQKLQEL-NNAVAISALT 184 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~--Ka~a~~~~L~eL-Np~V~V~~~~ 184 (1093)
..+|.|||+|..|..+|++|+..|. +|+++|.+.-....+... ...|.. -+....+.+..+ .+++-+...+
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~-----g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp 77 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLAN-----EAKGTKVVGAQSLKEMVSKLKKPRRIILLVK 77 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHT-----TTTTSSCEECSSHHHHHHTBCSSCEEEECSC
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc-----ccCCCceeccCCHHHHHhhccCCCEEEEecC
Confidence 4589999999999999999999997 789998754322221110 000100 001111122222 3454444443
Q ss_pred cc-cch-------hhhcCCceEEEecC-CHHHHHHHHHHHHhcCCCcceEeeeecc
Q 001356 185 TE-LTK-------EKLSDFQAVVFTDI-SLEKAVEFDDYCHNHQPPIAFIKSEVRG 231 (1093)
Q Consensus 185 ~~-l~~-------~~l~~~dvVV~~~~-~~~~~~~ln~~c~~~~~~ip~I~~~~~G 231 (1093)
.. ..+ ..+..-++||++.- ......++.+.+.+.+ +.|+.+.+.|
T Consensus 78 ~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~G--i~fvd~pVsG 131 (484)
T 4gwg_A 78 AGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKG--ILFVGSGVSG 131 (484)
T ss_dssp SSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT--CEEEEEEEES
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhc--cccccCCccC
Confidence 32 111 13444577777654 4444556666777778 7777765443
No 359
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=84.41 E-value=0.71 Score=49.84 Aligned_cols=36 Identities=22% Similarity=0.371 Sum_probs=30.8
Q ss_pred HHHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 501 KKLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 501 ~~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
..|.+++|+|.|+ ||||.++++.|+..|. +++++|.
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~------~V~~~~r 59 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGA------IVGLHGT 59 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 3577889999984 8999999999999997 7888774
No 360
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=84.40 E-value=2.5 Score=46.93 Aligned_cols=75 Identities=19% Similarity=0.195 Sum_probs=50.4
Q ss_pred CeEEEEc-CChhHHHHHHHHHHh-C-CceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeec
Q 001356 109 SNILISG-MQGLGAEIAKNLILA-G-VKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTT 185 (1093)
Q Consensus 109 s~VlIiG-~gglGseiaKnLvla-G-Vg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~ 185 (1093)
.+|.|+| +|.+|..++..|... + +.+|.|+|-+. +++..+-.|+.....++|..+..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~--------------------~~~G~a~Dl~~~~~~~~v~~~~~ 60 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP--------------------VTPGVAVDLSHIPTAVKIKGFSG 60 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST--------------------THHHHHHHHHTSCSSEEEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC--------------------CchhHHHHhhCCCCCceEEEecC
Confidence 3799999 899999999999876 4 46899998632 11222334555444456665432
Q ss_pred ccchhhhcCCceEEEecC
Q 001356 186 ELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 186 ~l~~~~l~~~dvVV~~~~ 203 (1093)
.-+.+-+++.|+||.+..
T Consensus 61 ~~~~~~~~~aDivii~ag 78 (312)
T 3hhp_A 61 EDATPALEGADVVLISAG 78 (312)
T ss_dssp SCCHHHHTTCSEEEECCS
T ss_pred CCcHHHhCCCCEEEEeCC
Confidence 223456889999998764
No 361
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=84.40 E-value=1.5 Score=47.71 Aligned_cols=35 Identities=17% Similarity=0.225 Sum_probs=29.2
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.+.++.++|.|+ ||||.++++.|+..|. +++++|.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r 60 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGV------TVGALGR 60 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeC
Confidence 467788999985 8999999999999997 8888874
No 362
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=84.40 E-value=1.8 Score=45.26 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=27.1
Q ss_pred cCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 505 EAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 505 ~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.++++|.|+ ||||.++++.|+..|. +++++|.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~------~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY------ALALGAR 34 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 457888885 8999999999999997 6888764
No 363
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=84.39 E-value=1.4 Score=47.58 Aligned_cols=42 Identities=31% Similarity=0.368 Sum_probs=27.9
Q ss_pred CHHHHH-HhhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 99 GRETMR-RLFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 99 G~~~q~-kL~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
|.+.|+ +-..++|||.|. |.+|+++++.|...| .+|++++..
T Consensus 2 ~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 45 (292)
T 1vl0_A 2 GSDKIHHHHHHMKILITGANGQLGREIQKQLKGKN-VEVIPTDVQ 45 (292)
T ss_dssp ----------CEEEEEESTTSHHHHHHHHHHTTSS-EEEEEECTT
T ss_pred CccccccccccceEEEECCCChHHHHHHHHHHhCC-CeEEeccCc
Confidence 334443 456788999985 669999999999999 478888764
No 364
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=84.37 E-value=1.6 Score=48.35 Aligned_cols=36 Identities=28% Similarity=0.342 Sum_probs=28.8
Q ss_pred HHhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 502 KLEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 502 ~L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.+..++|+|.| .|+||..+++.|+..|. +++++|.+
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~r~ 54 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGD------KVVGIDNF 54 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCC------EEEEEECC
Confidence 45668999999 59999999999999986 78888754
No 365
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=84.37 E-value=2.5 Score=46.87 Aligned_cols=33 Identities=24% Similarity=0.380 Sum_probs=29.2
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.||.|||+|.+|..++..|+..|. ..++++|-|
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~-----~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKEL-----GDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-----CeEEEEeCC
Confidence 589999999999999999999996 359999854
No 366
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=84.36 E-value=1.8 Score=45.37 Aligned_cols=33 Identities=27% Similarity=0.418 Sum_probs=28.1
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEec
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITD 541 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD 541 (1093)
+++++|+|.|+ |+||.++++.|+..|. +++++|
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~------~V~~~~ 36 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA------NIVLNG 36 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC------EEEEEc
Confidence 45678999984 9999999999999997 777774
No 367
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=84.29 E-value=0.89 Score=48.81 Aligned_cols=30 Identities=27% Similarity=0.393 Sum_probs=24.0
Q ss_pred HHHHhcCcEEEEcc-CcchHHHHHHHHHccc
Q 001356 500 QKKLEEAKVFVVGS-GALGCEFLKNLALMGV 529 (1093)
Q Consensus 500 q~~L~~~~VlivG~-GgiG~e~lknLa~~Gv 529 (1093)
+..+++++|+|.|+ ||||.++++.|+..|.
T Consensus 21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~ 51 (267)
T 4iiu_A 21 QSNAMSRSVLVTGASKGIGRAIARQLAADGF 51 (267)
T ss_dssp ----CCCEEEETTTTSHHHHHHHHHHHHTTC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHHCCC
Confidence 44677888999985 9999999999999998
No 368
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=84.23 E-value=0.91 Score=50.50 Aligned_cols=38 Identities=21% Similarity=0.348 Sum_probs=31.2
Q ss_pred HHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCc
Q 001356 104 RRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGV 142 (1093)
Q Consensus 104 ~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~ 142 (1093)
.+....+|.|||+|.+|..+|++|+..|. .++++|.+.
T Consensus 27 ~~~~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 64 (320)
T 4dll_A 27 SDPYARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTP 64 (320)
T ss_dssp --CCCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCH
T ss_pred cccCCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCH
Confidence 34456799999999999999999999996 688888643
No 369
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=84.23 E-value=0.56 Score=51.12 Aligned_cols=31 Identities=13% Similarity=0.344 Sum_probs=28.6
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEec
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITD 541 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD 541 (1093)
+++|+|+|+||.|..++..|+..|. +|+|++
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~------~v~V~n 148 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGL------QVSVLN 148 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC------EEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC------EEEEEe
Confidence 7899999999999999999999994 888875
No 370
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=84.15 E-value=3.5 Score=43.51 Aligned_cols=32 Identities=19% Similarity=0.198 Sum_probs=28.1
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 110 NILISGMQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 110 ~VlIiG~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
+|.|||+|.+|..++++|...|+.-+.++|.+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~ 33 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVR 33 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecC
Confidence 79999999999999999998888555788865
No 371
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=84.10 E-value=1.7 Score=47.14 Aligned_cols=36 Identities=17% Similarity=0.360 Sum_probs=30.3
Q ss_pred HHHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 501 KKLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 501 ~~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
..+++++++|.|+ ||||.++++.|+..|. +++++|.
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~------~V~~~~r 57 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGA------NIVLNGF 57 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEECC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 3567788999985 8999999999999997 7888774
No 372
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=84.06 E-value=2.2 Score=45.57 Aligned_cols=37 Identities=32% Similarity=0.521 Sum_probs=30.1
Q ss_pred HHHhhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeC
Q 001356 103 MRRLFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 103 q~kL~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
|..+.+++|+|.|+ ||+|.++|+.|+..|.. |.++|.
T Consensus 24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r 61 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGAR-VVLTAR 61 (262)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEEC
Confidence 44577889999985 78999999999999984 777764
No 373
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=84.02 E-value=2.1 Score=47.56 Aligned_cols=37 Identities=30% Similarity=0.515 Sum_probs=31.2
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
....||.|||+|.+|..++-.|+..|+. .+|.++|-|
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~----~ei~L~Di~ 40 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIV----DELVIIDLD 40 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSC----SEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 3457999999999999999999988863 589999854
No 374
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=83.99 E-value=0.97 Score=50.40 Aligned_cols=37 Identities=24% Similarity=0.214 Sum_probs=31.3
Q ss_pred HHHhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 501 KKLEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 501 ~~L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
..+.+++|+|.| .|.||+.+++.|+..|. +++++|.+
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 42 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA------TVKGYSLT 42 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC------eEEEEeCC
Confidence 356788999999 49999999999999986 78888753
No 375
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=83.98 E-value=1.7 Score=48.56 Aligned_cols=80 Identities=14% Similarity=0.226 Sum_probs=52.9
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHc-ccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCC
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHL 580 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~-Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~ 580 (1093)
+++++|+|.|+ |+||+++++.|+.. |. .+++++|.+. .|...+++.+. .-
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~-----~~V~~~~r~~-------------------~~~~~~~~~~~----~~ 70 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNA-----KKIIVYSRDE-------------------LKQSEMAMEFN----DP 70 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCC-----SEEEEEESCH-------------------HHHHHHHHHHC----CT
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCC-----CEEEEEECCh-------------------hhHHHHHHHhc----CC
Confidence 45689999995 99999999999999 87 6888887432 12222222221 23
Q ss_pred EEEEEecccCccccccchhhhhccCCEEEEccC
Q 001356 581 NTEALQIRANPETENVFNDTFWENLNVVVNALD 613 (1093)
Q Consensus 581 ~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alD 613 (1093)
.++.+..++.+.. .+ ...++++|+||.+..
T Consensus 71 ~v~~~~~Dl~d~~-~l--~~~~~~~D~Vih~Aa 100 (344)
T 2gn4_A 71 RMRFFIGDVRDLE-RL--NYALEGVDICIHAAA 100 (344)
T ss_dssp TEEEEECCTTCHH-HH--HHHTTTCSEEEECCC
T ss_pred CEEEEECCCCCHH-HH--HHHHhcCCEEEECCC
Confidence 5666666665422 11 245678999998763
No 376
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=83.98 E-value=0.93 Score=49.54 Aligned_cols=95 Identities=16% Similarity=0.072 Sum_probs=0.0
Q ss_pred hcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEE
Q 001356 504 EEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNT 582 (1093)
Q Consensus 504 ~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i 582 (1093)
++++|+|.|+ |.||..+++.|+..|. +++++|.+.-. +.
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~-------------------------------~~--- 40 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNNW------HAVGCGFRRAR-------------------------------PK--- 40 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTTC------EEEEEC-----------------------------------------
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCCC------eEEEEccCCCC-------------------------------CC---
Q ss_pred EEEecccCccccccchhhhhcc--CCEEEEccC-----------------CHHHHHHHhhcccccccceEeccccCccc
Q 001356 583 EALQIRANPETENVFNDTFWEN--LNVVVNALD-----------------NVNARLYIDQRCLYFQKPLLESGTLGAKC 642 (1093)
Q Consensus 583 ~~~~~~v~~~~~~~~~~~f~~~--~DvVi~alD-----------------n~~aR~~i~~~c~~~~~pli~sgt~G~~G 642 (1093)
.+..++.....-. +.++. +|+||++.. |+.+-..+-+.|...+..+|..++.+.+|
T Consensus 41 -~~~~Dl~d~~~~~---~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~ 115 (315)
T 2ydy_A 41 -FEQVNLLDSNAVH---HIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFD 115 (315)
T ss_dssp ------------CH---HHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHHTCEEEEEEEGGGSC
T ss_pred -eEEecCCCHHHHH---HHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcC
No 377
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=83.97 E-value=0.93 Score=49.48 Aligned_cols=38 Identities=18% Similarity=0.358 Sum_probs=32.4
Q ss_pred HHHHhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 500 QKKLEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 500 q~~L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.+||+++.++|-| .+|||-++++.|+..|. ++.++|.+
T Consensus 24 s~rL~gKvalVTGas~GIG~aiA~~la~~Ga------~V~i~~r~ 62 (273)
T 4fgs_A 24 TQRLNAKIAVITGATSGIGLAAAKRFVAEGA------RVFITGRR 62 (273)
T ss_dssp -CTTTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cchhCCCEEEEeCcCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 3578999999998 48999999999999998 89998843
No 378
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=83.93 E-value=0.73 Score=53.67 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=32.9
Q ss_pred HhhcCeEEEEcCChhHHHHHHHHHHhCC--ceEEEEe
Q 001356 105 RLFASNILISGMQGLGAEIAKNLILAGV--KSVTLHD 139 (1093)
Q Consensus 105 kL~~s~VlIiG~gglGseiaKnLvlaGV--g~itLvD 139 (1093)
.++..+|+|+|+||.|..+++.|...|+ ++|+|+|
T Consensus 183 ~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 183 KISEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 4677899999999999999999999999 9999998
No 379
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=83.92 E-value=1 Score=49.78 Aligned_cols=33 Identities=18% Similarity=0.408 Sum_probs=29.2
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
..+|.|||+|.+|..+|++|...|. +++++|.+
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~ 41 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRS 41 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 4689999999999999999999997 68888753
No 380
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=83.91 E-value=1.1 Score=48.56 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=29.6
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.|.+++++|.|+ ||||.++++.|+..|. +++++|.
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r 60 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGA------MVIGTAT 60 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeC
Confidence 467778888884 8999999999999997 7888774
No 381
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=83.87 E-value=1.7 Score=48.00 Aligned_cols=31 Identities=29% Similarity=0.525 Sum_probs=26.8
Q ss_pred CcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 506 AKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 506 ~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
++|+|.| .|.||..+++.|+..|. +++++|.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI------DLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC------EEEEEeC
Confidence 4799999 59999999999999986 7888763
No 382
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=83.82 E-value=1 Score=48.06 Aligned_cols=35 Identities=23% Similarity=0.429 Sum_probs=29.9
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.|++++++|.|+ ||||.++++.|+..|. +++++|.
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r 38 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA------RVVITGR 38 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeC
Confidence 366788999985 8999999999999997 7888874
No 383
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=83.75 E-value=3.6 Score=43.44 Aligned_cols=35 Identities=26% Similarity=0.378 Sum_probs=29.5
Q ss_pred HhhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeC
Q 001356 105 RLFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 105 kL~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
+++.++|+|.|+ ||+|.++|+.|+..|.. +.++|.
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~-V~~~~r 41 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGAA-VVVADI 41 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEcC
Confidence 467889999985 67999999999999984 777764
No 384
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=83.70 E-value=0.45 Score=52.45 Aligned_cols=50 Identities=16% Similarity=0.280 Sum_probs=38.3
Q ss_pred hhhhhhc--cCHHHHHHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 91 HSRQLAV--YGRETMRRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 91 YsRQi~l--~G~~~q~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
|+|+++- |.......|..++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 103 ~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~ 154 (290)
T 3gvx_A 103 NNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRS 154 (290)
T ss_dssp HHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred hhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHhhCc-EEEEEecc
Confidence 4444432 43333345889999999999999999999999998 68888864
No 385
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=83.65 E-value=0.82 Score=46.85 Aligned_cols=32 Identities=34% Similarity=0.350 Sum_probs=29.3
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
..|+|||+|..|..+|..|.+.|+ +++|+|..
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~-~V~v~Ek~ 34 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 469999999999999999999999 79999853
No 386
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=83.62 E-value=1.6 Score=47.54 Aligned_cols=33 Identities=27% Similarity=0.405 Sum_probs=29.0
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCc
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDEGV 142 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~ 142 (1093)
.+|.|||+|.+|..++++|...|. .++++|.+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC-CEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCH
Confidence 479999999999999999999995 688888654
No 387
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=83.61 E-value=3.5 Score=45.62 Aligned_cols=33 Identities=21% Similarity=0.308 Sum_probs=29.2
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCC
Q 001356 109 SNILISGMQGLGAEIAKNLILAGV-KSVTLHDEG 141 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d 141 (1093)
.+|.|||+|.+|+.++..|+..|. ..|+|+|-+
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~ 48 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLS 48 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 689999999999999999999995 479999863
No 388
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=83.55 E-value=0.6 Score=51.26 Aligned_cols=33 Identities=21% Similarity=0.280 Sum_probs=29.2
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
..||+|||+|++|+.++..|++.|. +++++|.+
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~------~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLP------HTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCT------TCEEEESS
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCC------eEEEEEec
Confidence 4689999999999999999999986 78888865
No 389
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=83.54 E-value=3 Score=49.02 Aligned_cols=32 Identities=25% Similarity=0.399 Sum_probs=28.2
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCCceEEEEeC
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
..+|.|||+|.+|..+|.+|+..|. .|+++|.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~-~V~v~dr 36 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY-TVAIYNR 36 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC-EEEEEcC
Confidence 4689999999999999999999997 5777764
No 390
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=83.52 E-value=3.2 Score=44.50 Aligned_cols=104 Identities=13% Similarity=0.095 Sum_probs=56.6
Q ss_pred eEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecccc
Q 001356 110 NILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTELT 188 (1093)
Q Consensus 110 ~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l~ 188 (1093)
+|||.|+ |.+|..+++.|...|. +|+.++.. ..|+.. .+.+.+.+++..+++-|+.-.....
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~--------------~~D~~d--~~~~~~~~~~~~~d~vi~~a~~~~~ 69 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEY-DIYPFDKK--------------LLDITN--ISQVQQVVQEIRPHIIIHCAAYTKV 69 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTE-EEEEECTT--------------TSCTTC--HHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEeccc--------------ccCCCC--HHHHHHHHHhcCCCEEEECCcccCh
Confidence 7999995 7799999999999985 78888762 123322 2333444444433333222110000
Q ss_pred hhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEeeeecceeE
Q 001356 189 KEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKSEVRGLFG 234 (1093)
Q Consensus 189 ~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~~~~G~~G 234 (1093)
.......+-. -..+......+-+.|++.+ +.+|..++.+.+|
T Consensus 70 ~~~~~~~~~~--~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~vy~ 111 (287)
T 3sc6_A 70 DQAEKERDLA--YVINAIGARNVAVASQLVG--AKLVYISTDYVFQ 111 (287)
T ss_dssp HHHTTCHHHH--HHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGSC
T ss_pred HHHhcCHHHH--HHHHHHHHHHHHHHHHHcC--CeEEEEchhhhcC
Confidence 0000000000 0001222356778889988 7899888877665
No 391
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=83.46 E-value=2 Score=45.48 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=29.3
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+.+++|+|.|+ |+||.++++.|+..|. +++++|.
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~------~V~~~~r 45 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGA------RVIIADL 45 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeC
Confidence 56788999985 9999999999999997 7888863
No 392
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=83.45 E-value=1.9 Score=46.97 Aligned_cols=93 Identities=14% Similarity=0.101 Sum_probs=0.0
Q ss_pred hcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecc
Q 001356 107 FASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTE 186 (1093)
Q Consensus 107 ~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~ 186 (1093)
...+|.|||+|.+|..++++|...|. +++++| |.....+.+.+. ......
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~-----------------------~~~~~~~~~~~~------g~~~~~ 52 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGV-TVYAFD-----------------------LMEANVAAVVAQ------GAQACE 52 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTC-EEEEEC-----------------------SSHHHHHHHHTT------TCEECS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCC-eEEEEe-----------------------CCHHHHHHHHHC------CCeecC
Q ss_pred cchhhhcCCceEEEec-CCHHHHHHHH---HHHHhcCCCcceEeeee
Q 001356 187 LTKEKLSDFQAVVFTD-ISLEKAVEFD---DYCHNHQPPIAFIKSEV 229 (1093)
Q Consensus 187 l~~~~l~~~dvVV~~~-~~~~~~~~ln---~~c~~~~~~ip~I~~~~ 229 (1093)
-.++.+.++|+||.|. .+......+. ++.........+|...+
T Consensus 53 ~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~ 99 (301)
T 3cky_A 53 NNQKVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSS 99 (301)
T ss_dssp SHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCC
T ss_pred CHHHHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCC
No 393
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=83.43 E-value=3.2 Score=48.63 Aligned_cols=108 Identities=9% Similarity=0.061 Sum_probs=64.0
Q ss_pred hhcCeEEEEcC-ChhHHHHHHHHHHhC-C-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCC-----
Q 001356 106 LFASNILISGM-QGLGAEIAKNLILAG-V-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNA----- 177 (1093)
Q Consensus 106 L~~s~VlIiG~-gglGseiaKnLvlaG-V-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~----- 177 (1093)
....+|||.|+ |++|+++++.|+..+ + .+|++++...- +. ...++|.+....
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~-------------------~~-~~~~~l~~~~~~~~~~~ 130 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAES-------------------DE-DARRRLEKTFDSGDPEL 130 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSS-------------------HH-HHHHHHHGGGCSSCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCC-------------------cH-HHHHHHHHHHHhcchhh
Confidence 35679999996 669999999999883 1 47777764321 11 111222221111
Q ss_pred ---------cEEEEeecccc-------h----hhhcCCceEEEecC-------------CHHHHHHHHHHHHhcCCCcce
Q 001356 178 ---------VAISALTTELT-------K----EKLSDFQAVVFTDI-------------SLEKAVEFDDYCHNHQPPIAF 224 (1093)
Q Consensus 178 ---------V~V~~~~~~l~-------~----~~l~~~dvVV~~~~-------------~~~~~~~ln~~c~~~~~~ip~ 224 (1093)
-+++.+..+++ . +.+.+.|+||.+.. +......+-++|++.+. ..|
T Consensus 131 ~~~~~~~~~~~v~~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~-~~~ 209 (478)
T 4dqv_A 131 LRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKL-KPF 209 (478)
T ss_dssp HHHHHHHHTTTEEEEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSC-CCE
T ss_pred hhhhhhhccCceEEEEeECCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCC-CeE
Confidence 34555555553 1 24557788886532 23344567778888773 278
Q ss_pred EeeeecceeE
Q 001356 225 IKSEVRGLFG 234 (1093)
Q Consensus 225 I~~~~~G~~G 234 (1093)
|..++.+.+|
T Consensus 210 V~iSS~~v~~ 219 (478)
T 4dqv_A 210 TYVSTADVGA 219 (478)
T ss_dssp EEEEEGGGGT
T ss_pred EEEeehhhcC
Confidence 8877766543
No 394
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=83.41 E-value=2.8 Score=49.30 Aligned_cols=32 Identities=25% Similarity=0.339 Sum_probs=28.3
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
..+|.|||+|.+|+.++++|+..|. +++++|.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~------~V~v~dr 36 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY------TVAIYNR 36 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC------CEEEECS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC------EEEEEcC
Confidence 3689999999999999999999997 6888763
No 395
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=83.39 E-value=2.9 Score=45.90 Aligned_cols=76 Identities=16% Similarity=0.128 Sum_probs=0.0
Q ss_pred hcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecc
Q 001356 107 FASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTE 186 (1093)
Q Consensus 107 ~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~ 186 (1093)
...+|.|||+|.+|..++++|+..|. .++++| |.....+.+.+..-.. ...
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~d-----------------------r~~~~~~~~~~~g~~~-----~~~ 56 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGL-STWGAD-----------------------LNPQACANLLAEGACG-----AAA 56 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEC-----------------------SCHHHHHHHHHTTCSE-----EES
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEE-----------------------CCHHHHHHHHHcCCcc-----ccC
Q ss_pred cchhhhcCCceEEEecCCHHHHHHH
Q 001356 187 LTKEKLSDFQAVVFTDISLEKAVEF 211 (1093)
Q Consensus 187 l~~~~l~~~dvVV~~~~~~~~~~~l 211 (1093)
-..+.+.+.|+||.|..+......+
T Consensus 57 ~~~e~~~~aDvvi~~vp~~~~~~~v 81 (303)
T 3g0o_A 57 SAREFAGVVDALVILVVNAAQVRQV 81 (303)
T ss_dssp SSTTTTTTCSEEEECCSSHHHHHHH
T ss_pred CHHHHHhcCCEEEEECCCHHHHHHH
No 396
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=83.37 E-value=0.47 Score=56.47 Aligned_cols=92 Identities=15% Similarity=0.253 Sum_probs=56.9
Q ss_pred CcchhhhhccCHHHH------------------HHHhcCcEEEEccCcchHHHHHHHHH----cccccC-CCcceEEecC
Q 001356 486 SRYDAQISVFGSKLQ------------------KKLEEAKVFVVGSGALGCEFLKNLAL----MGVSCG-NQGKLTITDD 542 (1093)
Q Consensus 486 ~Rydrqi~l~G~~~q------------------~~L~~~~VlivG~GgiG~e~lknLa~----~Gv~~~-~~g~i~liD~ 542 (1093)
+||...|-+|-.+.| ++|...||++.|+|+-|+.+++.|+. .|+.-. -..+|.++|.
T Consensus 283 ~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~vD~ 362 (605)
T 1o0s_A 283 DKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDI 362 (605)
T ss_dssp HHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEET
T ss_pred HHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEEEEEC
Confidence 566666666655533 36888999999999999999999998 564100 0279999997
Q ss_pred Cccccc---cCCc-c-cccccC-ccccchHHHHHHHHHHhCCCCEE
Q 001356 543 DVIEKS---NLSR-Q-FLFRDW-NIGQAKSTVAASAAALINPHLNT 582 (1093)
Q Consensus 543 D~Ie~s---NLnR-Q-flf~~~-dvG~~Ka~va~~~l~~~np~~~i 582 (1093)
.-+=.. +|+. | .+.+.. +.+ .+++.++...|++-|
T Consensus 363 ~Gli~~~r~~l~~~k~~~A~~~~~~~-----~L~eav~~vkpdVlI 403 (605)
T 1o0s_A 363 DGLVTKNRKEMNPRHVQFAKDMPETT-----SILEVIRAARPGALI 403 (605)
T ss_dssp TEECBTTCSSCCGGGTTTCBSSCCCC-----CHHHHHHHHCCSEEE
T ss_pred CCceeCCCCCchHHHHHHHhhcCCCC-----CHHHHHhhcCCCEEE
Confidence 644322 3432 1 222221 111 366666666666544
No 397
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=83.36 E-value=0.7 Score=50.31 Aligned_cols=36 Identities=19% Similarity=0.379 Sum_probs=31.4
Q ss_pred HHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 502 KLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 502 ~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.+.+++|+|||+|++|..+++.|...|+ +++++|.+
T Consensus 126 ~~~~~~v~iiGaG~~g~aia~~L~~~g~------~V~v~~r~ 161 (275)
T 2hk9_A 126 EVKEKSILVLGAGGASRAVIYALVKEGA------KVFLWNRT 161 (275)
T ss_dssp TGGGSEEEEECCSHHHHHHHHHHHHHTC------EEEEECSS
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHcCC------EEEEEECC
Confidence 3678899999999999999999999987 78888743
No 398
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=83.33 E-value=1.4 Score=46.26 Aligned_cols=34 Identities=29% Similarity=0.409 Sum_probs=28.7
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+.+++|+|.|+ |+||.++++.|+..|. +++++|.
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~------~V~~~~r 39 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGS------TVIITGT 39 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEeC
Confidence 45678899985 9999999999999997 7888763
No 399
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=83.29 E-value=1.6 Score=46.86 Aligned_cols=34 Identities=21% Similarity=0.284 Sum_probs=27.9
Q ss_pred cCeEEEEc-CChhHHHHHHHHHHhCCceEEEEeCCc
Q 001356 108 ASNILISG-MQGLGAEIAKNLILAGVKSVTLHDEGV 142 (1093)
Q Consensus 108 ~s~VlIiG-~gglGseiaKnLvlaGVg~itLvD~d~ 142 (1093)
.++|+|.| .|++|.++++.|+..|. ++.+.|.+.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~ 37 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSP 37 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCC
Confidence 45799998 57899999999999995 678877643
No 400
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=83.27 E-value=0.61 Score=50.38 Aligned_cols=35 Identities=29% Similarity=0.457 Sum_probs=31.6
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
+.+ +|+|+|+||.|..++..|+..|+ .+|+|+|.+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~-----~~I~v~nR~ 141 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGV-----KDIWVVNRT 141 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTC-----CCEEEEESC
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCC-----CEEEEEeCC
Confidence 456 99999999999999999999999 899999754
No 401
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=83.19 E-value=1.5 Score=46.38 Aligned_cols=62 Identities=16% Similarity=0.183 Sum_probs=41.3
Q ss_pred hcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEE
Q 001356 504 EEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNT 582 (1093)
Q Consensus 504 ~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i 582 (1093)
.+++++|.| .||||.++++.|+..|. +++++|... ..+.+.+++.+....+ ++
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~------~V~~~~~~~------------------~~~~~~~~~~~~~~~~--~~ 56 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGY------NVAVNYAGS------------------KEKAEAVVEEIKAKGV--DS 56 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESSC------------------HHHHHHHHHHHHHTTS--CE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeCCC------------------HHHHHHHHHHHHhcCC--cE
Confidence 456788888 59999999999999997 777766321 1244455555655443 45
Q ss_pred EEEecccCc
Q 001356 583 EALQIRANP 591 (1093)
Q Consensus 583 ~~~~~~v~~ 591 (1093)
..+..++.+
T Consensus 57 ~~~~~Dv~d 65 (246)
T 3osu_A 57 FAIQANVAD 65 (246)
T ss_dssp EEEECCTTC
T ss_pred EEEEccCCC
Confidence 555555553
No 402
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=83.17 E-value=2 Score=46.83 Aligned_cols=98 Identities=14% Similarity=0.159 Sum_probs=58.6
Q ss_pred cCcEEEEc-cCcchHHHHHHHHHc-ccccCCCcce-EEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 505 EAKVFVVG-SGALGCEFLKNLALM-GVSCGNQGKL-TITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 505 ~~~VlivG-~GgiG~e~lknLa~~-Gv~~~~~g~i-~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
..||.|+| +|.+|.++++.+... ++ +| -++|...-.. .-.|+|. ++ .+.+.+.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~------eLv~~~d~~~~~~---------~G~d~ge----l~-----g~~~gv~ 62 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDA------TLVGALDRTGSPQ---------LGQDAGA----FL-----GKQTGVA 62 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTE------EEEEEBCCTTCTT---------TTSBTTT----TT-----TCCCSCB
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCC------EEEEEEEecCccc---------ccccHHH----Hh-----CCCCCce
Confidence 46899999 799999999998764 33 33 3355331100 0123331 10 1111111
Q ss_pred EEEEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceEeccccCc
Q 001356 582 TEALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLESGTLGA 640 (1093)
Q Consensus 582 i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~sgt~G~ 640 (1093)
+..+. ++.+.++|+||+++ .+.+-...-..|.++++|+| .||.|+
T Consensus 63 -------v~~dl-----~~ll~~~DVVIDfT-~p~a~~~~~~~al~~G~~vV-igTTG~ 107 (272)
T 4f3y_A 63 -------LTDDI-----ERVCAEADYLIDFT-LPEGTLVHLDAALRHDVKLV-IGTTGF 107 (272)
T ss_dssp -------CBCCH-----HHHHHHCSEEEECS-CHHHHHHHHHHHHHHTCEEE-ECCCCC
T ss_pred -------ecCCH-----HHHhcCCCEEEEcC-CHHHHHHHHHHHHHcCCCEE-EECCCC
Confidence 11111 23456899999998 46655666678999999999 477775
No 403
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=83.14 E-value=1.5 Score=47.16 Aligned_cols=34 Identities=29% Similarity=0.366 Sum_probs=28.9
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+.+++|+|.|+ ||||.++++.|+..|. +++++|.
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r 38 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGA------KVTITGR 38 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeC
Confidence 56678888885 9999999999999997 7888764
No 404
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=83.12 E-value=3.1 Score=44.01 Aligned_cols=35 Identities=20% Similarity=0.496 Sum_probs=29.9
Q ss_pred hhcCeEEEEc-CChhHHHHHHHHHHhCCceEEEEeC
Q 001356 106 LFASNILISG-MQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 106 L~~s~VlIiG-~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
|++++|+|.| .||+|.++++.|+..|...+.++|.
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEec
Confidence 5677899998 5679999999999999877888775
No 405
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=83.11 E-value=1.8 Score=46.97 Aligned_cols=35 Identities=20% Similarity=0.334 Sum_probs=28.9
Q ss_pred HHhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 502 KLEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 502 ~L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.+.+++++|.| .||||.++++.|+..|. +++++|.
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~------~V~~~~r 55 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGY------RVVIHYH 55 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTC------EEEEEES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC------eEEEEeC
Confidence 46778899998 59999999999999997 7888874
No 406
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=83.10 E-value=3.2 Score=45.98 Aligned_cols=76 Identities=16% Similarity=0.118 Sum_probs=48.5
Q ss_pred eEEEEcC-ChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhC----CCcEEEEe
Q 001356 110 NILISGM-QGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELN----NAVAISAL 183 (1093)
Q Consensus 110 ~VlIiG~-gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLN----p~V~V~~~ 183 (1093)
+|+|+|+ |.+|+.++..|+..|. .++.|+|... ...|++..+..|.... ..+++...
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~-----------------~~~~~~~~~~dl~~~~~~~~~~~~i~~~ 64 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH-----------------SINKLEGLREDIYDALAGTRSDANIYVE 64 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG-----------------GHHHHHHHHHHHHHHHTTSCCCCEEEEE
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCC-----------------chhhhHHHHHHHHHhHHhcCCCeEEEeC
Confidence 7999999 9999999999998886 5588888400 0123443333344333 34455542
Q ss_pred ecccchhhhcCCceEEEecC
Q 001356 184 TTELTKEKLSDFQAVVFTDI 203 (1093)
Q Consensus 184 ~~~l~~~~l~~~dvVV~~~~ 203 (1093)
++.+ .+.+++.|+||.+..
T Consensus 65 ~d~l-~~al~gaD~Vi~~Ag 83 (313)
T 1hye_A 65 SDEN-LRIIDESDVVIITSG 83 (313)
T ss_dssp ETTC-GGGGTTCSEEEECCS
T ss_pred Ccch-HHHhCCCCEEEECCC
Confidence 2112 345789999998753
No 407
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=83.10 E-value=2.1 Score=47.55 Aligned_cols=73 Identities=27% Similarity=0.233 Sum_probs=49.1
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhC---CCCEE
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALIN---PHLNT 582 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~n---p~~~i 582 (1093)
.||.|||+|.+|..++-.|+..|+. ++|+|+|-| ..|++..+..+.... ..+++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~----~el~L~Di~-------------------~~k~~g~a~dl~~~~~~~~~~~v 57 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVA----REVVLVDLD-------------------RKLAQAHAEDILHATPFAHPVWV 57 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC----SEEEEECSS-------------------HHHHHHHHHHHHTTGGGSCCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCC-------------------hhHHHHHHHHHHHhHhhcCCeEE
Confidence 4899999999999999999998863 689999843 223443344444332 34555
Q ss_pred EEEecccCccccccchhhhhccCCEEEEccC
Q 001356 583 EALQIRANPETENVFNDTFWENLNVVVNALD 613 (1093)
Q Consensus 583 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~alD 613 (1093)
.+ ++ .+-+++.|+||.+..
T Consensus 58 ~~-----~~-------~~a~~~aD~Vii~ag 76 (310)
T 2xxj_A 58 WA-----GS-------YGDLEGARAVVLAAG 76 (310)
T ss_dssp EE-----CC-------GGGGTTEEEEEECCC
T ss_pred EE-----CC-------HHHhCCCCEEEECCC
Confidence 53 11 122678999998864
No 408
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=83.10 E-value=1.7 Score=48.32 Aligned_cols=73 Identities=18% Similarity=0.144 Sum_probs=52.6
Q ss_pred hcCeEEEEcCChhHHHHHHHHHHh-CCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeec
Q 001356 107 FASNILISGMQGLGAEIAKNLILA-GVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTT 185 (1093)
Q Consensus 107 ~~s~VlIiG~gglGseiaKnLvla-GVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~ 185 (1093)
...+|+|||+|..|...++.|... ++.+|+++|.+ |++..++++++.. .+.+...
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~---------------------~a~~la~~l~~~~-g~~~~~~-- 175 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY---------------------ASPEILERIGRRC-GVPARMA-- 175 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT---------------------CCHHHHHHHHHHH-TSCEEEC--
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc---------------------HHHHHHHHHHHhc-CCeEEEe--
Confidence 357899999999999999999864 78999999863 3445555555432 3444443
Q ss_pred ccchhhhcCCceEEEecCC
Q 001356 186 ELTKEKLSDFQAVVFTDIS 204 (1093)
Q Consensus 186 ~l~~~~l~~~dvVV~~~~~ 204 (1093)
++ ++.+.++|+||.|+.+
T Consensus 176 ~~-~eav~~aDIVi~aT~s 193 (313)
T 3hdj_A 176 AP-ADIAAQADIVVTATRS 193 (313)
T ss_dssp CH-HHHHHHCSEEEECCCC
T ss_pred CH-HHHHhhCCEEEEccCC
Confidence 22 4567889999999854
No 409
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=83.08 E-value=4.1 Score=44.92 Aligned_cols=97 Identities=12% Similarity=0.120 Sum_probs=0.0
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchH--HHHHHHHHHHhCCCcE-------E
Q 001356 110 NILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNR--ALASIQKLQELNNAVA-------I 180 (1093)
Q Consensus 110 ~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~K--a~a~~~~L~eLNp~V~-------V 180 (1093)
+|.|||+|.+|+.+|.+|...|. .++++| | .....+.+.+..-.+. +
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~-~V~~~~-----------------------r~~~~~~~~~~~~~~~~~~~g~~~~~~ 57 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWG-----------------------TEFDTEILKSISAGREHPRLGVKLNGV 57 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEEC-----------------------CGGGHHHHHHHHTTCCBTTTTBCCCSE
T ss_pred EEEEECcCHHHHHHHHHHHhCCC-eEEEEE-----------------------ccCCHHHHHHHHHhCcCcccCccccce
Q ss_pred EEeecccchhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEeeeecce
Q 001356 181 SALTTELTKEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKSEVRGL 232 (1093)
Q Consensus 181 ~~~~~~l~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~~~~G~ 232 (1093)
.+....-..+.+.++|+||.|.-+......+..+.. .++. ..|..-+.|+
T Consensus 58 ~~~~~~~~~~~~~~~D~vi~~v~~~~~~~v~~~i~~-l~~~-~~vv~~~ng~ 107 (335)
T 1txg_A 58 EIFWPEQLEKCLENAEVVLLGVSTDGVLPVMSRILP-YLKD-QYIVLISKGL 107 (335)
T ss_dssp EEECGGGHHHHHTTCSEEEECSCGGGHHHHHHHHTT-TCCS-CEEEECCCSE
T ss_pred EEecHHhHHHHHhcCCEEEEcCChHHHHHHHHHHhc-CCCC-CEEEEEcCcC
No 410
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=83.05 E-value=3.6 Score=44.39 Aligned_cols=35 Identities=29% Similarity=0.496 Sum_probs=29.5
Q ss_pred HhhcCeEEEEc-CChhHHHHHHHHHHhCCceEEEEeC
Q 001356 105 RLFASNILISG-MQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 105 kL~~s~VlIiG-~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
.|..++|+|.| .||+|.++|+.|+..|. ++.++|.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 43 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGR 43 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788999998 56899999999999998 5777764
No 411
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=83.05 E-value=1.7 Score=46.35 Aligned_cols=34 Identities=21% Similarity=0.409 Sum_probs=28.9
Q ss_pred HhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+.+++|+|.| .|+||.++++.|+..|. +++++|.
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~------~V~~~~r 46 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA------VIHTCAR 46 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeC
Confidence 4567899998 59999999999999997 7888764
No 412
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=82.99 E-value=2.4 Score=45.42 Aligned_cols=82 Identities=15% Similarity=0.218 Sum_probs=52.3
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceE-EecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEEE
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLT-ITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTEA 584 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~-liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~~ 584 (1093)
.||.|+|||.+|..+++.+...+ +.|+ ++|.+.-+ ...+.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~------~eLva~~d~~~~~------------------------------~~gv~--- 44 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKG------HEIVGVIENTPKA------------------------------TTPYQ--- 44 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT------CEEEEEECSSCC--------------------------------CCSC---
T ss_pred eEEEEECcCHHHHHHHHHHHhCC------CEEEEEEecCccc------------------------------cCCCc---
Confidence 58999999999999999988754 2443 35533210 01111
Q ss_pred EecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceEeccccCc
Q 001356 585 LQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLESGTLGA 640 (1093)
Q Consensus 585 ~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~sgt~G~ 640 (1093)
+..+ + +++. ++|+||+++.-..+...+. ...++|+| .||.|+
T Consensus 45 ----v~~d----l-~~l~-~~DVvIDft~p~a~~~~~~---l~~g~~vV-igTTG~ 86 (243)
T 3qy9_A 45 ----QYQH----I-ADVK-GADVAIDFSNPNLLFPLLD---EDFHLPLV-VATTGE 86 (243)
T ss_dssp ----BCSC----T-TTCT-TCSEEEECSCHHHHHHHHT---SCCCCCEE-ECCCSS
T ss_pred ----eeCC----H-HHHh-CCCEEEEeCChHHHHHHHH---HhcCCceE-eCCCCC
Confidence 1111 1 1234 8999999986555555554 78899998 577776
No 413
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=82.99 E-value=2.5 Score=47.24 Aligned_cols=34 Identities=32% Similarity=0.616 Sum_probs=29.5
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
..||.|||+|.+|..++-.|+..|.. .+|+|+|-
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~----~el~L~Di 42 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIA----QEIGIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCC----CEEEEEeC
Confidence 36899999999999999999988863 58999983
No 414
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=82.96 E-value=4.5 Score=44.43 Aligned_cols=102 Identities=12% Similarity=0.239 Sum_probs=59.1
Q ss_pred eEEEEcC-ChhHHHHHHHHHHh---CC--ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEe
Q 001356 110 NILISGM-QGLGAEIAKNLILA---GV--KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISAL 183 (1093)
Q Consensus 110 ~VlIiG~-gglGseiaKnLvla---GV--g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~ 183 (1093)
+|||.|+ |++|..+++.|... |+ .+++++|...-.. +. +.+.++...-.++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~-~~--------------------~~~~~~~~~~~~~~~ 60 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAG-NR--------------------ANLAPVDADPRLRFV 60 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTC-CG--------------------GGGGGGTTCTTEEEE
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccC-ch--------------------hhhhhcccCCCeEEE
Confidence 6999985 78999999999996 63 5788887532100 00 001111111234444
Q ss_pred ecccch-----hhhcCCceEEEecCC-----------------HHHHHHHHHHHHhcCCCc-ceEeeeecceeE
Q 001356 184 TTELTK-----EKLSDFQAVVFTDIS-----------------LEKAVEFDDYCHNHQPPI-AFIKSEVRGLFG 234 (1093)
Q Consensus 184 ~~~l~~-----~~l~~~dvVV~~~~~-----------------~~~~~~ln~~c~~~~~~i-p~I~~~~~G~~G 234 (1093)
..++++ +.+.++|+||.+... ......+-+.|++.+ + .||..++.+.+|
T Consensus 61 ~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~--~~~~v~~SS~~vyg 132 (337)
T 1r6d_A 61 HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG--VGRVVHVSTNQVYG 132 (337)
T ss_dssp ECCTTCHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGGGC
T ss_pred EcCCCCHHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEecchHHhC
Confidence 444432 245678888866431 112345667888877 4 788777766655
No 415
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=82.96 E-value=0.31 Score=57.79 Aligned_cols=45 Identities=22% Similarity=0.324 Sum_probs=35.1
Q ss_pred HHHhcCcEEEEccCcchHHHHHHHHH----cccccC-CCcceEEecCCcc
Q 001356 501 KKLEEAKVFVVGSGALGCEFLKNLAL----MGVSCG-NQGKLTITDDDVI 545 (1093)
Q Consensus 501 ~~L~~~~VlivG~GgiG~e~lknLa~----~Gv~~~-~~g~i~liD~D~I 545 (1093)
++|+..||++.|+|+-|+.+++.|.. .|+.-. -..+|.++|..-+
T Consensus 280 k~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~~D~~Gl 329 (564)
T 1pj3_A 280 KPISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGL 329 (564)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEE
T ss_pred CcHhHcEEEEeCCCHHHHHHHHHHHHHHHHcCCChHHhhCcEEEEeCCCe
Confidence 36888999999999999999999986 785100 0178999997644
No 416
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=82.96 E-value=3.4 Score=45.61 Aligned_cols=35 Identities=26% Similarity=0.340 Sum_probs=27.9
Q ss_pred hhcCeEEEEc-CChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 106 LFASNILISG-MQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 106 L~~s~VlIiG-~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
+...+|||.| .|++|..+++.|+..| .+|+++|..
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~ 54 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLERG-DKVVGIDNF 54 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECC
Confidence 4457899998 5779999999999999 478887764
No 417
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=82.93 E-value=3.7 Score=44.58 Aligned_cols=97 Identities=12% Similarity=0.156 Sum_probs=55.2
Q ss_pred cCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEE
Q 001356 505 EAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTE 583 (1093)
Q Consensus 505 ~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~ 583 (1093)
.++|+|.|+ |.+|..+++.|+..|. ++++++.+.-. ....|+..+. .+. .+. ++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~------~V~~~~R~~~~--------------~~~~~~~~~~-~~~--~~~--~~ 58 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGH------PTYVLFRPEVV--------------SNIDKVQMLL-YFK--QLG--AK 58 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC------CEEEECCSCCS--------------SCHHHHHHHH-HHH--TTT--CE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC------cEEEEECCCcc--------------cchhHHHHHH-HHH--hCC--eE
Confidence 368999996 9999999999999986 77776633100 0011222221 111 233 34
Q ss_pred EEecccCccccccchhhhhccCCEEEEccC------CHHHHHHHhhcccccc
Q 001356 584 ALQIRANPETENVFNDTFWENLNVVVNALD------NVNARLYIDQRCLYFQ 629 (1093)
Q Consensus 584 ~~~~~v~~~~~~~~~~~f~~~~DvVi~alD------n~~aR~~i~~~c~~~~ 629 (1093)
.+..++.+. +.+ ...++++|+||++.. |+..-..+-+.|...+
T Consensus 59 ~~~~D~~d~-~~l--~~~~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g 107 (313)
T 1qyd_A 59 LIEASLDDH-QRL--VDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAG 107 (313)
T ss_dssp EECCCSSCH-HHH--HHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSC
T ss_pred EEeCCCCCH-HHH--HHHHhCCCEEEECCccccchhhHHHHHHHHHHHHhcC
Confidence 455555432 222 345788999998875 3333334444555444
No 418
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=82.93 E-value=0.73 Score=50.28 Aligned_cols=32 Identities=31% Similarity=0.470 Sum_probs=29.3
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.+|.|||+|.+|+.++..|+..|. +++++|.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~------~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF------AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEeCC
Confidence 589999999999999999999998 89998854
No 419
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=82.90 E-value=0.68 Score=52.96 Aligned_cols=38 Identities=29% Similarity=0.453 Sum_probs=35.2
Q ss_pred HHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCc
Q 001356 502 KLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDV 544 (1093)
Q Consensus 502 ~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~ 544 (1093)
+|...||+|+|+|+.|+.+++.|..+|+ ++|+++|.+-
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga-----~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGA-----TKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCC-----CeEEEEECCC
Confidence 5677899999999999999999999999 8999999875
No 420
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=82.88 E-value=0.64 Score=53.65 Aligned_cols=35 Identities=31% Similarity=0.533 Sum_probs=32.1
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+.+++|+|+|+|++|..+++.|...|+ ++++++|.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~-----~~V~v~~r 199 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGV-----RAVLVANR 199 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCC-----SEEEEECS
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCC-----CEEEEEeC
Confidence 578899999999999999999999998 89999873
No 421
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=82.85 E-value=0.36 Score=54.41 Aligned_cols=35 Identities=23% Similarity=0.326 Sum_probs=31.2
Q ss_pred HHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 502 KLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 502 ~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.|.+++|.|||.|.||.++++.+...|+ ++...|.
T Consensus 138 ~l~g~tvGIiG~G~IG~~va~~~~~fg~------~v~~~d~ 172 (334)
T 3kb6_A 138 ELNRLTLGVIGTGRIGSRVAMYGLAFGM------KVLCYDV 172 (334)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC------EEEEECS
T ss_pred eecCcEEEEECcchHHHHHHHhhcccCc------eeeecCC
Confidence 4788899999999999999999999998 7777773
No 422
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=82.85 E-value=1.4 Score=48.57 Aligned_cols=36 Identities=19% Similarity=0.316 Sum_probs=27.9
Q ss_pred hcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 504 EEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 504 ~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.+++|+|.|+ |+||..+++.|+..|-+ -+++++|..
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~----~~V~~~~r~ 38 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPD----WEVINIDKL 38 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTT----CEEEEEECC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCC----CEEEEEecC
Confidence 3568999995 99999999999999730 277877743
No 423
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=82.82 E-value=2.1 Score=47.68 Aligned_cols=89 Identities=11% Similarity=0.170 Sum_probs=53.4
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
+.+++|+|.|+ ||||.++++.|+..|. ++++++.+... ....+.+.+++.+....+ +
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~------~V~~~~r~~~~--------------r~~~~~~~l~~~~~~~~~--~ 60 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGH------RVYASMRDIVG--------------RNASNVEAIAGFARDNDV--D 60 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESCTTT--------------TTHHHHHHHHHHHHHHTC--C
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEecCcccc--------------cCHHHHHHHHHHHHhcCC--c
Confidence 45678888885 9999999999999997 77776643221 123345555666655543 4
Q ss_pred EEEEecccCcccc--ccch--hhhhccCCEEEEccC
Q 001356 582 TEALQIRANPETE--NVFN--DTFWENLNVVVNALD 613 (1093)
Q Consensus 582 i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~alD 613 (1093)
+..+..++..... ..+. .+-+...|+||++..
T Consensus 61 ~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG 96 (324)
T 3u9l_A 61 LRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAG 96 (324)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred EEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5566666654221 1111 011347888887753
No 424
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=82.80 E-value=1.2 Score=48.59 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=30.2
Q ss_pred HhcCcEEEEccCc-chHHHHHHHHHcccccCCCcceEEec
Q 001356 503 LEEAKVFVVGSGA-LGCEFLKNLALMGVSCGNQGKLTITD 541 (1093)
Q Consensus 503 L~~~~VlivG~Gg-iG~e~lknLa~~Gv~~~~~g~i~liD 541 (1093)
|.+++++|||.|+ +|..+++.|...|. .+++++
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gA------tVtv~~ 181 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNY------TVSVCH 181 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTC------EEEEEC
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCC------eEEEEe
Confidence 8899999999987 79999999999997 788885
No 425
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=82.80 E-value=2 Score=45.95 Aligned_cols=34 Identities=24% Similarity=0.359 Sum_probs=29.4
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+.+++++|.|+ ||||.++++.|+..|. +++++|.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r 39 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGT------AIALLDM 39 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 56788999985 8999999999999997 7888873
No 426
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=82.80 E-value=3.8 Score=47.94 Aligned_cols=93 Identities=15% Similarity=0.069 Sum_probs=60.7
Q ss_pred cCeEEEEcCChh-HHHHHHHHHH--hCC--ceEEEEeCCcceeeCCCcceecccCcccchHHHHHH---HHH-HHhCCCc
Q 001356 108 ASNILISGMQGL-GAEIAKNLIL--AGV--KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASI---QKL-QELNNAV 178 (1093)
Q Consensus 108 ~s~VlIiG~ggl-GseiaKnLvl--aGV--g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~---~~L-~eLNp~V 178 (1093)
..+|.|||+|++ |..++..|+. .+. .+|+|+|-+. |+.|++.+. +.+ ......+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~-----------------~~e~~~~~~~~~~~~~~~~~~~~ 69 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPE-----------------GKEKLEIVGALAKRMVEKAGVPI 69 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGG-----------------GHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCC-----------------ChHHHHHHHHHHHHHHhhcCCCc
Confidence 458999999998 7888888887 554 6799998522 224544422 222 3455566
Q ss_pred EEEEeecccchhhhcCCceEEEecCC--HHHHHHHHHHHHhcC
Q 001356 179 AISALTTELTKEKLSDFQAVVFTDIS--LEKAVEFDDYCHNHQ 219 (1093)
Q Consensus 179 ~V~~~~~~l~~~~l~~~dvVV~~~~~--~~~~~~ln~~c~~~~ 219 (1093)
+|.+.. ++ .+-+++.|+||.+... .+.+.+...+..+++
T Consensus 70 ~i~~t~-D~-~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g 110 (450)
T 1s6y_A 70 EIHLTL-DR-RRALDGADFVTTQFRVGGLEARAKDERIPLKYG 110 (450)
T ss_dssp EEEEES-CH-HHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGT
T ss_pred EEEEeC-CH-HHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcC
Confidence 776632 21 2467899999998763 344555566666666
No 427
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=82.76 E-value=1.2 Score=47.25 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=27.9
Q ss_pred hcCcEEEEc-cCcchHHHHHHHHH-cccccCCCcceEEecCC
Q 001356 504 EEAKVFVVG-SGALGCEFLKNLAL-MGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 504 ~~~~VlivG-~GgiG~e~lknLa~-~Gv~~~~~g~i~liD~D 543 (1093)
++++|+|.| .|+||.++++.|+. .|. ++++++.+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~------~V~~~~r~ 38 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG------DVVLTARD 38 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS------EEEEEESS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC------eEEEEeCC
Confidence 356788888 59999999999999 887 78888743
No 428
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=82.76 E-value=3.3 Score=43.44 Aligned_cols=35 Identities=34% Similarity=0.488 Sum_probs=29.5
Q ss_pred HhhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeC
Q 001356 105 RLFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 105 kL~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
.|+.++|+|.|+ ||+|.++++.|+..|. ++.++|.
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r 46 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGR 46 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEec
Confidence 467788999985 6899999999999998 5777764
No 429
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=82.75 E-value=0.69 Score=51.76 Aligned_cols=32 Identities=28% Similarity=0.477 Sum_probs=28.8
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
..||+|||+|++|+.++..|++.|. .++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~------~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE------AINVLAR 34 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC------CEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC------EEEEEEC
Confidence 4689999999999999999999987 7888873
No 430
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=82.73 E-value=2.5 Score=46.78 Aligned_cols=34 Identities=26% Similarity=0.344 Sum_probs=28.8
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.||.|||+|.+|+.++..|+..|.+ .+++++|.|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g----~~V~l~D~~ 34 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLA----RELVLLDVV 34 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 3799999999999999999987641 479999864
No 431
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=82.73 E-value=1.2 Score=47.74 Aligned_cols=34 Identities=18% Similarity=0.336 Sum_probs=29.2
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEec
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITD 541 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD 541 (1093)
.|.+++++|.|+ ||||.++++.|+..|. ++++++
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~------~V~~~~ 39 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGA------NVVLTY 39 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEc
Confidence 467889999985 8999999999999998 777773
No 432
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=82.70 E-value=1.8 Score=47.78 Aligned_cols=41 Identities=20% Similarity=0.300 Sum_probs=28.6
Q ss_pred HhcCcEEEEc-cCcchHHHHHHHHHcccc-cCCCcceEEecCC
Q 001356 503 LEEAKVFVVG-SGALGCEFLKNLALMGVS-CGNQGKLTITDDD 543 (1093)
Q Consensus 503 L~~~~VlivG-~GgiG~e~lknLa~~Gv~-~~~~g~i~liD~D 543 (1093)
+.+++|+|.| +|+||+.+++.|+..|.. .-+.-+++++|.+
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~ 54 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVF 54 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESS
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEcc
Confidence 3456899999 599999999999999810 0000277777743
No 433
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=82.69 E-value=1.1 Score=48.00 Aligned_cols=83 Identities=22% Similarity=0.285 Sum_probs=50.6
Q ss_pred HhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
+.+++++|.| .||||.++++.|+..|. +++++|.+. .+.+.+++.++...+ +
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~--~ 55 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGA------TVYITGRHL-------------------DTLRVVAQEAQSLGG--Q 55 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHHSS--E
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHHcCC--c
Confidence 4567888888 59999999999999997 788876431 233344455554433 5
Q ss_pred EEEEecccCcccc--ccchh---hhhccCCEEEEcc
Q 001356 582 TEALQIRANPETE--NVFND---TFWENLNVVVNAL 612 (1093)
Q Consensus 582 i~~~~~~v~~~~~--~~~~~---~f~~~~DvVi~al 612 (1093)
+..+..++.+... ..++. ..+...|++|++.
T Consensus 56 ~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~lvnnA 91 (260)
T 2qq5_A 56 CVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNA 91 (260)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred eEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEECC
Confidence 6666666654221 11111 0144567777654
No 434
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=82.69 E-value=1.4 Score=48.62 Aligned_cols=34 Identities=18% Similarity=0.242 Sum_probs=29.9
Q ss_pred HHhcCcEEEEccCc-chHHHHHHHHHcccccCCCcceEEec
Q 001356 502 KLEEAKVFVVGSGA-LGCEFLKNLALMGVSCGNQGKLTITD 541 (1093)
Q Consensus 502 ~L~~~~VlivG~Gg-iG~e~lknLa~~Gv~~~~~g~i~liD 541 (1093)
.+.+++|+|||.|. +|..+++.|...|. ++++++
T Consensus 162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gA------tVtv~h 196 (301)
T 1a4i_A 162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNA------TVTTCH 196 (301)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC------EEEEEC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhCCC------eEEEEE
Confidence 36788999999996 79999999999986 789886
No 435
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=82.61 E-value=1.7 Score=45.78 Aligned_cols=34 Identities=21% Similarity=0.339 Sum_probs=29.4
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+.+++|+|.|+ |+||.++++.|+..|. +++++|.
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~------~V~~~~r 38 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGA------KVMITGR 38 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCC------EEEEEeC
Confidence 56788999985 9999999999999997 7888874
No 436
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=82.58 E-value=7.6 Score=45.43 Aligned_cols=33 Identities=24% Similarity=0.269 Sum_probs=29.9
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCc
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDEGV 142 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~ 142 (1093)
.+|.|||+|..|+.||.+|+.+|. .++++|.+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcH
Confidence 589999999999999999999998 899998643
No 437
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=82.56 E-value=2 Score=47.47 Aligned_cols=32 Identities=28% Similarity=0.433 Sum_probs=27.7
Q ss_pred cCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 505 EAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 505 ~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.++|+|.|+ |+||+.+++.|+..|. +++++|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r 34 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY------LPVVIDN 34 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC------CEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEec
Confidence 468999985 9999999999999986 7888874
No 438
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=82.55 E-value=0.82 Score=49.18 Aligned_cols=97 Identities=13% Similarity=0.103 Sum_probs=57.6
Q ss_pred CcEEEEcc-CcchHHHHHHHHHc--ccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEE
Q 001356 506 AKVFVVGS-GALGCEFLKNLALM--GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNT 582 (1093)
Q Consensus 506 ~~VlivG~-GgiG~e~lknLa~~--Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i 582 (1093)
++|+|.|+ |.||+.+++.|+.. |. ++++++.+. + +... +.. +. +
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~------~V~~~~r~~---~----------------~~~~----l~~--~~--~ 47 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPAS------QIIAIVRNV---E----------------KAST----LAD--QG--V 47 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGG------GEEEEESCT---T----------------TTHH----HHH--TT--C
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCC------eEEEEEcCH---H----------------HHhH----Hhh--cC--C
Confidence 47999997 99999999999988 76 788876421 0 1111 111 22 3
Q ss_pred EEEecccCccccccchhhhhccCCEEEEccC-------CHHHHHHHhhccccccc-ceEecccc
Q 001356 583 EALQIRANPETENVFNDTFWENLNVVVNALD-------NVNARLYIDQRCLYFQK-PLLESGTL 638 (1093)
Q Consensus 583 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~alD-------n~~aR~~i~~~c~~~~~-pli~sgt~ 638 (1093)
+.+..++.+. +.+ ...++++|+||.+.. |+..-..+-+.|.+.++ .+|..++.
T Consensus 48 ~~~~~D~~d~-~~l--~~~~~~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~ 108 (287)
T 2jl1_A 48 EVRHGDYNQP-ESL--QKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYA 108 (287)
T ss_dssp EEEECCTTCH-HHH--HHHTTTCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred eEEEeccCCH-HHH--HHHHhcCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4445555432 111 245678999998764 44444455566666654 45544443
No 439
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=82.55 E-value=4.3 Score=43.89 Aligned_cols=84 Identities=18% Similarity=0.195 Sum_probs=49.3
Q ss_pred cCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEE
Q 001356 505 EAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTE 583 (1093)
Q Consensus 505 ~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~ 583 (1093)
.++|+|.|+ |.||..+++.|+..|. ++++++.+.- + ..+- ..|+..+. .+. .+.+ +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~R~~~--~---------~~~~-~~~~~~~~-~l~--~~~v--~ 58 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN------PTYALVRKTI--T---------AANP-ETKEELID-NYQ--SLGV--I 58 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC------CEEEEECCSC--C---------SSCH-HHHHHHHH-HHH--HTTC--E
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC------cEEEEECCCc--c---------cCCh-HHHHHHHH-HHH--hCCC--E
Confidence 368999997 9999999999999986 6777653310 0 0000 02322221 222 2333 4
Q ss_pred EEecccCccccccchhhhhccCCEEEEccCC
Q 001356 584 ALQIRANPETENVFNDTFWENLNVVVNALDN 614 (1093)
Q Consensus 584 ~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn 614 (1093)
.+..++.+. +.+ ...+++.|+||++...
T Consensus 59 ~v~~D~~d~-~~l--~~~~~~~d~vi~~a~~ 86 (307)
T 2gas_A 59 LLEGDINDH-ETL--VKAIKQVDIVICAAGR 86 (307)
T ss_dssp EEECCTTCH-HHH--HHHHTTCSEEEECSSS
T ss_pred EEEeCCCCH-HHH--HHHHhCCCEEEECCcc
Confidence 455555432 222 3457789999998754
No 440
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=82.42 E-value=1.9 Score=46.55 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=28.9
Q ss_pred HHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEec
Q 001356 502 KLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITD 541 (1093)
Q Consensus 502 ~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD 541 (1093)
.+.+++|+|.|+ ||||.++++.|+..|. +++++|
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~------~V~~~~ 59 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGA------KVAVNY 59 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEe
Confidence 467788888885 8999999999999997 777766
No 441
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=82.42 E-value=0.82 Score=50.57 Aligned_cols=36 Identities=25% Similarity=0.444 Sum_probs=30.4
Q ss_pred hcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 504 EEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 504 ~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
...||.|||+|++|+.++..|+..|.. ++++++|.+
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~----~~V~l~d~~ 41 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIA----REIVLEDIA 41 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCC----SEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 346899999999999999999999852 589999854
No 442
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=82.41 E-value=1.7 Score=47.15 Aligned_cols=33 Identities=24% Similarity=0.219 Sum_probs=27.9
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEec
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITD 541 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD 541 (1093)
+.+++|+|.|+ ||||.++++.|+..|. ++++++
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~------~V~~~~ 75 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVS------HVICIS 75 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSS------EEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCC------EEEEEc
Confidence 45678999984 9999999999999987 677765
No 443
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=82.40 E-value=1.6 Score=46.57 Aligned_cols=37 Identities=19% Similarity=0.275 Sum_probs=28.8
Q ss_pred HHHhcCcEEEEc-cCcchHHHHHHHHHcc---cccCCCcceEEecCC
Q 001356 501 KKLEEAKVFVVG-SGALGCEFLKNLALMG---VSCGNQGKLTITDDD 543 (1093)
Q Consensus 501 ~~L~~~~VlivG-~GgiG~e~lknLa~~G---v~~~~~g~i~liD~D 543 (1093)
..+..++|+|.| .|+||.++++.|+..| . +++++|.+
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~------~V~~~~r~ 57 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQ------HLFTTCRN 57 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCS------EEEEEESC
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCc------EEEEEecC
Confidence 346677899998 4999999999999998 5 78888743
No 444
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=82.34 E-value=2.3 Score=45.88 Aligned_cols=35 Identities=20% Similarity=0.444 Sum_probs=27.5
Q ss_pred HHHhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 501 KKLEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 501 ~~L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
..+. ++++|.| .||||.++++.|+..|. +++++|.
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~------~V~~~~r 53 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGW------SLVLTGR 53 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTC------EEEEEES
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEEC
Confidence 3455 7788888 58999999999999997 7888874
No 445
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=82.33 E-value=4.6 Score=43.75 Aligned_cols=80 Identities=13% Similarity=0.000 Sum_probs=49.2
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCC-ceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecc
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGV-KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTE 186 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGV-g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~ 186 (1093)
..+|.|||+|.+|..+++.|...|. ..++++|.+. .+++ .+.+..... .. ..+
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~-------------------~~~~----~~~~~g~~~--~~-~~~ 59 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD-------------------RSRD----IALERGIVD--EA-TAD 59 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH-------------------HHHH----HHHHTTSCS--EE-ESC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH-------------------HHHH----HHHHcCCcc--cc-cCC
Confidence 4689999999999999999999974 3677776421 1222 222221100 11 111
Q ss_pred cchhhhcCCceEEEecCCHHHHHHHHHH
Q 001356 187 LTKEKLSDFQAVVFTDISLEKAVEFDDY 214 (1093)
Q Consensus 187 l~~~~l~~~dvVV~~~~~~~~~~~ln~~ 214 (1093)
+ ++.+.+.|+||.|.-+......+.++
T Consensus 60 ~-~~~~~~aDvVilavp~~~~~~v~~~l 86 (290)
T 3b1f_A 60 F-KVFAALADVIILAVPIKKTIDFIKIL 86 (290)
T ss_dssp T-TTTGGGCSEEEECSCHHHHHHHHHHH
T ss_pred H-HHhhcCCCEEEEcCCHHHHHHHHHHH
Confidence 1 24567899999998655554444444
No 446
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=82.33 E-value=3.1 Score=44.73 Aligned_cols=96 Identities=11% Similarity=0.063 Sum_probs=56.5
Q ss_pred CcEEEEcc-CcchHHHHHHHHHc-ccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEE
Q 001356 506 AKVFVVGS-GALGCEFLKNLALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTE 583 (1093)
Q Consensus 506 ~~VlivG~-GgiG~e~lknLa~~-Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~ 583 (1093)
++|+|.|+ |.||..+++.|+.. |. ++++++.+.-....+ ..+ .++
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~------~V~~~~R~~~~~~~~-------------------------~~~--~v~ 47 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHID------HFHIGVRNVEKVPDD-------------------------WRG--KVS 47 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCT------TEEEEESSGGGSCGG-------------------------GBT--TBE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCC------cEEEEECCHHHHHHh-------------------------hhC--CCE
Confidence 47999995 99999999999987 65 788776543211100 012 344
Q ss_pred EEecccCccccccchhhhhccCCEEEEccCC-------HHHHHHHhhcccccccc-eEeccc
Q 001356 584 ALQIRANPETENVFNDTFWENLNVVVNALDN-------VNARLYIDQRCLYFQKP-LLESGT 637 (1093)
Q Consensus 584 ~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn-------~~aR~~i~~~c~~~~~p-li~sgt 637 (1093)
.+..++.+. +.+ ...++++|+||.+... ...-..+-+.|...++. +|..++
T Consensus 48 ~~~~D~~d~-~~l--~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 48 VRQLDYFNQ-ESM--VEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp EEECCTTCH-HHH--HHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEcCCCCH-HHH--HHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 555555432 111 3457889999988653 22223444566666643 554444
No 447
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=82.31 E-value=1.8 Score=46.78 Aligned_cols=37 Identities=19% Similarity=0.246 Sum_probs=28.5
Q ss_pred HHHhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 501 KKLEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 501 ~~L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
..+.+++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 61 (272)
T 4dyv_A 24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGY------GVALAGRR 61 (272)
T ss_dssp ----CCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 3567778888885 8999999999999997 78888743
No 448
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=82.25 E-value=0.98 Score=49.24 Aligned_cols=33 Identities=33% Similarity=0.438 Sum_probs=30.3
Q ss_pred hcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEec
Q 001356 504 EEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITD 541 (1093)
Q Consensus 504 ~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD 541 (1093)
.+++|+|+|+||.|..++..|+..|+ .+|+|++
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~-----~~i~v~n 150 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGF-----EKLKIYA 150 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTC-----CCEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-----CEEEEEe
Confidence 35789999999999999999999999 8999985
No 449
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=82.23 E-value=2.7 Score=46.61 Aligned_cols=105 Identities=14% Similarity=0.072 Sum_probs=0.0
Q ss_pred hcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecc
Q 001356 107 FASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTE 186 (1093)
Q Consensus 107 ~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~ 186 (1093)
...+|+|||+|++|+.+|..|+.+|. .++++ . -.........+.+.-..|..........
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~------------------~~~~~~~i~~~g~~~~~~~~~~~~~~~~ 77 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI-A------------------RPQHVQAIEATGLRLETQSFDEQVKVSA 77 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE-C------------------CHHHHHHHHHHCEEEECSSCEEEECCEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE-E------------------cHhHHHHHHhCCeEEEcCCCcEEEeeee
Q ss_pred cch-hhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEeeeecce
Q 001356 187 LTK-EKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKSEVRGL 232 (1093)
Q Consensus 187 l~~-~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~~~~G~ 232 (1093)
.++ +.+..+|+||+|.-+......+..+....++. ..|..-..|+
T Consensus 78 ~~~~~~~~~~D~vilavk~~~~~~~l~~l~~~l~~~-~~iv~~~nGi 123 (318)
T 3hwr_A 78 SSDPSAVQGADLVLFCVKSTDTQSAALAMKPALAKS-ALVLSLQNGV 123 (318)
T ss_dssp ESCGGGGTTCSEEEECCCGGGHHHHHHHHTTTSCTT-CEEEEECSSS
T ss_pred eCCHHHcCCCCEEEEEcccccHHHHHHHHHHhcCCC-CEEEEeCCCC
No 450
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=82.23 E-value=0.81 Score=50.30 Aligned_cols=32 Identities=25% Similarity=0.447 Sum_probs=29.2
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.+|.|||+|.+|+.++..|+..|. +++++|.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEECC
Confidence 479999999999999999999997 89999854
No 451
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=82.21 E-value=3.5 Score=45.02 Aligned_cols=82 Identities=11% Similarity=0.139 Sum_probs=49.2
Q ss_pred cCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccc-cchHHHHHHHHHHhCCCCEE
Q 001356 505 EAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIG-QAKSTVAASAAALINPHLNT 582 (1093)
Q Consensus 505 ~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG-~~Ka~va~~~l~~~np~~~i 582 (1093)
.++|+|.|+ |.+|..+++.|+..|. ++++++.+.- +-. ..|+..+.. +. .+. +
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~------~V~~~~R~~~--------------~~~~~~~~~~l~~-~~--~~~--v 58 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSH------PTFIYARPLT--------------PDSTPSSVQLREE-FR--SMG--V 58 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTC------CEEEEECCCC--------------TTCCHHHHHHHHH-HH--HTT--C
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCC------cEEEEECCcc--------------cccChHHHHHHHH-hh--cCC--c
Confidence 468999996 9999999999999986 7777763210 000 012222211 11 133 3
Q ss_pred EEEecccCccccccchhhhhccCCEEEEccCC
Q 001356 583 EALQIRANPETENVFNDTFWENLNVVVNALDN 614 (1093)
Q Consensus 583 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn 614 (1093)
+.+..++.+. +.+ ...++++|+||++...
T Consensus 59 ~~v~~D~~d~-~~l--~~a~~~~d~vi~~a~~ 87 (321)
T 3c1o_A 59 TIIEGEMEEH-EKM--VSVLKQVDIVISALPF 87 (321)
T ss_dssp EEEECCTTCH-HHH--HHHHTTCSEEEECCCG
T ss_pred EEEEecCCCH-HHH--HHHHcCCCEEEECCCc
Confidence 4455555432 222 3567889999998764
No 452
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=82.19 E-value=1 Score=50.54 Aligned_cols=92 Identities=18% Similarity=0.112 Sum_probs=59.1
Q ss_pred HHHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCC
Q 001356 501 KKLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHL 580 (1093)
Q Consensus 501 ~~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~ 580 (1093)
..|..++|.|||+|.+|..++++|...|+ ++++.|.+. .++. +.+.+. .+
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~------~V~~~~~~~-------------------~~~~---~~a~~~--G~ 61 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGV------DVTVGLRSG-------------------SATV---AKAEAH--GL 61 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTC------CEEEECCTT-------------------CHHH---HHHHHT--TC
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcC------EEEEEECCh-------------------HHHH---HHHHHC--CC
Confidence 46788899999999999999999999997 677776431 0111 111121 22
Q ss_pred EEEEEecccCccccccchhhhhccCCEEEEccCCHHHHHHHh-hcc--cccccceEec
Q 001356 581 NTEALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYID-QRC--LYFQKPLLES 635 (1093)
Q Consensus 581 ~i~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~-~~c--~~~~~pli~s 635 (1093)
.+ . . . .+.+++.|+||.|+-....+..+. ... ...+..++++
T Consensus 62 ~~--~----~--~-----~e~~~~aDvVilavp~~~~~~v~~~~i~~~l~~~~ivi~~ 106 (338)
T 1np3_A 62 KV--A----D--V-----KTAVAAADVVMILTPDEFQGRLYKEEIEPNLKKGATLAFA 106 (338)
T ss_dssp EE--E----C--H-----HHHHHTCSEEEECSCHHHHHHHHHHHTGGGCCTTCEEEES
T ss_pred EE--c----c--H-----HHHHhcCCEEEEeCCcHHHHHHHHHHHHhhCCCCCEEEEc
Confidence 21 1 1 1 234678999999998777776666 443 2234556654
No 453
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=82.18 E-value=1.4 Score=48.69 Aligned_cols=35 Identities=17% Similarity=0.290 Sum_probs=31.1
Q ss_pred HHhcCcEEEEccCc-chHHHHHHHHHcccccCCCcceEEecC
Q 001356 502 KLEEAKVFVVGSGA-LGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 502 ~L~~~~VlivG~Gg-iG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
.|.+++++|||.|+ +|..++..|...|. .+++++.
T Consensus 162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA------tVtv~~~ 197 (300)
T 4a26_A 162 EMAGKRAVVLGRSNIVGAPVAALLMKENA------TVTIVHS 197 (300)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC------EEEEECT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC------eEEEEeC
Confidence 46889999999998 79999999999997 7888874
No 454
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=82.12 E-value=4.5 Score=47.22 Aligned_cols=99 Identities=11% Similarity=0.029 Sum_probs=0.0
Q ss_pred CeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHH------------HHHhCC
Q 001356 109 SNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQK------------LQELNN 176 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~------------L~eLNp 176 (1093)
.+|.|||+|.+|..+|.+|+..|. .++++| +...|++.+.+. +++.-.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D-------------------~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~ 62 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCID-------------------TDRNKIEQLNSGTIPIYEPGLEKMIARNVK 62 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEC-------------------SCHHHHHHHHHTCSCCCSTTHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEE-------------------CCHHHHHHHHcCCCcccCCCHHHHHHhhcc
Q ss_pred CcEEEEeecccchhhhcCCceEEEecCCH----------HHHHHHHHHHHhcCCCcceEeeee
Q 001356 177 AVAISALTTELTKEKLSDFQAVVFTDISL----------EKAVEFDDYCHNHQPPIAFIKSEV 229 (1093)
Q Consensus 177 ~V~V~~~~~~l~~~~l~~~dvVV~~~~~~----------~~~~~ln~~c~~~~~~ip~I~~~~ 229 (1093)
.-.+.+..+ ..+.+.+.|+||.|..+. .....+..+.........+|..++
T Consensus 63 ~~~l~~t~d--~~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ST 123 (450)
T 3gg2_A 63 AGRLRFGTE--IEQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKST 123 (450)
T ss_dssp TTSEEEESC--HHHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred cCcEEEECC--HHHHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeee
No 455
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=82.11 E-value=1.8 Score=45.66 Aligned_cols=33 Identities=24% Similarity=0.371 Sum_probs=27.8
Q ss_pred HhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEec
Q 001356 503 LEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITD 541 (1093)
Q Consensus 503 L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD 541 (1093)
|++++|+|.| .||||.++++.|+..|. +++++|
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~------~V~~~~ 35 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGA------NVVVNY 35 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEe
Confidence 3567888888 59999999999999997 777776
No 456
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=82.10 E-value=4.3 Score=44.76 Aligned_cols=32 Identities=25% Similarity=0.372 Sum_probs=26.7
Q ss_pred cCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeC
Q 001356 108 ASNILISGM-QGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 108 ~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
.++|+|.|+ |++|+++++.|+..|. +|+++|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r 34 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDN 34 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-CEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEec
Confidence 368999985 7899999999999995 6777765
No 457
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=82.10 E-value=3.3 Score=46.13 Aligned_cols=87 Identities=17% Similarity=0.174 Sum_probs=55.3
Q ss_pred CeEEEEcCChhHHH-HHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeeccc
Q 001356 109 SNILISGMQGLGAE-IAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTEL 187 (1093)
Q Consensus 109 s~VlIiG~gglGse-iaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l 187 (1093)
++|.+||.||.|.. +|+.|...|. ++++.|...- .+ ..+.|++. .+.+.. . .
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~-~V~~~D~~~~-----------------~~----~~~~L~~~--gi~v~~--g-~ 57 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGF-EVSGCDAKMY-----------------PP----MSTQLEAL--GIDVYE--G-F 57 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTC-EEEEEESSCC-----------------TT----HHHHHHHT--TCEEEE--S-C
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCC-EEEEEcCCCC-----------------cH----HHHHHHhC--CCEEEC--C-C
Confidence 58999999999996 8999999997 6888885321 00 13356555 355442 2 2
Q ss_pred chhhh--cCCceEEEecC-CHHHHHHHHHHHHhcCCCcceEe
Q 001356 188 TKEKL--SDFQAVVFTDI-SLEKAVEFDDYCHNHQPPIAFIK 226 (1093)
Q Consensus 188 ~~~~l--~~~dvVV~~~~-~~~~~~~ln~~c~~~~~~ip~I~ 226 (1093)
.++.+ .++|+||.+.. +.... .-..++++| +|++.
T Consensus 58 ~~~~l~~~~~d~vV~Spgi~~~~p--~~~~a~~~g--i~v~~ 95 (326)
T 3eag_A 58 DAAQLDEFKADVYVIGNVAKRGMD--VVEAILNLG--LPYIS 95 (326)
T ss_dssp CGGGGGSCCCSEEEECTTCCTTCH--HHHHHHHTT--CCEEE
T ss_pred CHHHcCCCCCCEEEECCCcCCCCH--HHHHHHHcC--CcEEe
Confidence 23334 47999998754 22111 123567888 88775
No 458
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=82.09 E-value=3.1 Score=46.06 Aligned_cols=63 Identities=13% Similarity=0.314 Sum_probs=43.9
Q ss_pred HhhcCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEe
Q 001356 105 RLFASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISAL 183 (1093)
Q Consensus 105 kL~~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~ 183 (1093)
.+..++|||.|+ ||+|.++|+.|+..|. +|.+.|.+ ..+.+.+.+.+....+...+..+
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 64 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIR-------------------QDSIDKALATLEAEGSGPEVMGV 64 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHHTCGGGEEEE
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHhcCCCCeEEEE
Confidence 356788999985 6799999999999998 47777642 23555566666666654455555
Q ss_pred eccc
Q 001356 184 TTEL 187 (1093)
Q Consensus 184 ~~~l 187 (1093)
..++
T Consensus 65 ~~Dl 68 (319)
T 3ioy_A 65 QLDV 68 (319)
T ss_dssp ECCT
T ss_pred ECCC
Confidence 4444
No 459
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=82.04 E-value=1.6 Score=47.74 Aligned_cols=34 Identities=24% Similarity=0.320 Sum_probs=29.5
Q ss_pred HhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+.+++|+|.| .||||.++++.|+..|. +++++|.
T Consensus 32 l~~k~vlVTGas~gIG~aia~~L~~~G~------~V~~~~r 66 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGFAIASAYAKAGA------TIVFNDI 66 (291)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 6778899998 59999999999999997 7888763
No 460
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=82.03 E-value=2.2 Score=46.08 Aligned_cols=50 Identities=24% Similarity=0.244 Sum_probs=29.0
Q ss_pred hhhhhhhc-cCHHHHH-HhhcCeEEEEc-CChhHHHHHHHHHHhCCceEEEEeC
Q 001356 90 LHSRQLAV-YGRETMR-RLFASNILISG-MQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 90 ~YsRQi~l-~G~~~q~-kL~~s~VlIiG-~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
.|.|+.+- +|...|. .|+.+.|+|.| .||+|.++|+.|+..|. ++.++|.
T Consensus 8 ~~~~~~~~~~gp~~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 60 (270)
T 3ftp_A 8 HMGTLEAQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGA-MVIGTAT 60 (270)
T ss_dssp ---------------CCTTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccccccCCCCCCcccccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 44454444 5655554 46777888887 46899999999999998 6777664
No 461
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=81.99 E-value=6.2 Score=46.54 Aligned_cols=104 Identities=18% Similarity=0.203 Sum_probs=0.0
Q ss_pred hhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCc-------
Q 001356 106 LFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAV------- 178 (1093)
Q Consensus 106 L~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V------- 178 (1093)
+.-.+|.|||+|..|+.||.+|+.+|. .++++| +...+++.+.+.+.+.-...
T Consensus 3 m~~~kVgVIGaG~MG~~IA~~la~aG~-~V~l~D-------------------~~~e~l~~~~~~i~~~l~~~~~~g~~~ 62 (483)
T 3mog_A 3 LNVQTVAVIGSGTMGAGIAEVAASHGH-QVLLYD-------------------ISAEALTRAIDGIHARLNSRVTRGKLT 62 (483)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTC-CEEEEC-------------------SCHHHHHHHHHHHHHHHHTTTTTTSSC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCC-eEEEEE-------------------CCHHHHHHHHHHHHHHHHHHHHcCCCC
Q ss_pred ---------EEEEeecccchhhhcCCceEEEecC-CHHHHHHHHHHHHhcCCCcceEeeeecce
Q 001356 179 ---------AISALTTELTKEKLSDFQAVVFTDI-SLEKAVEFDDYCHNHQPPIAFIKSEVRGL 232 (1093)
Q Consensus 179 ---------~V~~~~~~l~~~~l~~~dvVV~~~~-~~~~~~~ln~~c~~~~~~ip~I~~~~~G~ 232 (1093)
.++..... +.+.+.|+||.+.- +.+....+-+-....-.+-.+|.+.+.++
T Consensus 63 ~~~~~~~~~~i~~~~~~---~~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti 123 (483)
T 3mog_A 63 AETCERTLKRLIPVTDI---HALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSI 123 (483)
T ss_dssp HHHHHHHHHTEEEECCG---GGGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred HHHHHHHHhceeEeCCH---HHhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCC
No 462
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=81.96 E-value=1 Score=49.54 Aligned_cols=34 Identities=21% Similarity=0.205 Sum_probs=29.6
Q ss_pred cCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCc
Q 001356 108 ASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGV 142 (1093)
Q Consensus 108 ~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~ 142 (1093)
..+|.|||+|.+|..+|++|...|. .++++|.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT-CEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 4689999999999999999999996 688887643
No 463
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=81.94 E-value=1.9 Score=48.12 Aligned_cols=89 Identities=12% Similarity=0.078 Sum_probs=0.0
Q ss_pred eEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCc-------EEEE
Q 001356 110 NILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAV-------AISA 182 (1093)
Q Consensus 110 ~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V-------~V~~ 182 (1093)
+|.|||+|.+|+.++.+|+.+|. .++++| |...-.+.|++....+ .+.+
T Consensus 16 kI~iIG~G~mG~ala~~L~~~G~-~V~~~~-----------------------r~~~~~~~l~~~g~~~~~~~~~~~~~~ 71 (335)
T 1z82_A 16 RFFVLGAGSWGTVFAQMLHENGE-EVILWA-----------------------RRKEIVDLINVSHTSPYVEESKITVRA 71 (335)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEEC-----------------------SSHHHHHHHHHHSCBTTBTTCCCCSEE
T ss_pred cEEEECcCHHHHHHHHHHHhCCC-eEEEEe-----------------------CCHHHHHHHHHhCCcccCCCCeeeEEE
Q ss_pred eecccchhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEeee
Q 001356 183 LTTELTKEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKSE 228 (1093)
Q Consensus 183 ~~~~l~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~~ 228 (1093)
... ..+ +..+|+||+|.-+......+..+.. .+ ..+|+..
T Consensus 72 ~~~--~~~-~~~aDvVil~vk~~~~~~v~~~l~~-~~--~~vv~~~ 111 (335)
T 1z82_A 72 TND--LEE-IKKEDILVIAIPVQYIREHLLRLPV-KP--SMVLNLS 111 (335)
T ss_dssp ESC--GGG-CCTTEEEEECSCGGGHHHHHTTCSS-CC--SEEEECC
T ss_pred eCC--HHH-hcCCCEEEEECCHHHHHHHHHHhCc-CC--CEEEEEe
No 464
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=81.93 E-value=0.82 Score=50.56 Aligned_cols=32 Identities=19% Similarity=0.301 Sum_probs=27.7
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
..||+|||+|++|+.++..|+ .|. ++++++.+
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~------~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYH------DVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTS------EEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCC------ceEEEECC
Confidence 468999999999999999999 775 78888743
No 465
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=81.85 E-value=0.85 Score=49.26 Aligned_cols=33 Identities=30% Similarity=0.296 Sum_probs=29.3
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCc
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDV 544 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~ 544 (1093)
.||.|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~------~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGH------EVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC------CEEEEEcCc
Confidence 379999999999999999999987 899998653
No 466
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=81.80 E-value=1.6 Score=46.59 Aligned_cols=34 Identities=15% Similarity=0.252 Sum_probs=28.9
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+++++|+|.|+ |+||.++++.|+..|. +++++|.
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~------~v~~~~r 53 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGA------SVVVNYG 53 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEcC
Confidence 56778999985 8999999999999997 7777764
No 467
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=81.79 E-value=0.78 Score=49.84 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=29.7
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEec
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITD 541 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD 541 (1093)
+.+++|+|+|+||+|..++..|+..|. +++++|
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G~------~V~v~~ 149 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLDC------AVTITN 149 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEEC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCC------EEEEEE
Confidence 467899999999999999999999995 788876
No 468
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=81.76 E-value=0.77 Score=50.47 Aligned_cols=35 Identities=26% Similarity=0.519 Sum_probs=0.0
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
|.+++|+|||+|++|..+++.|...|. +++++|..
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~------~V~~~dr~ 187 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGA------KVKVGARE 187 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCC------EEEEEECC
No 469
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=81.59 E-value=1.2 Score=48.22 Aligned_cols=34 Identities=26% Similarity=0.389 Sum_probs=28.8
Q ss_pred HhcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEecC
Q 001356 503 LEEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTITDD 542 (1093)
Q Consensus 503 L~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~liD~ 542 (1093)
+.+++++|.| .||||.++++.|+..|. +++++|.
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r 61 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGC------KVIVNYA 61 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 5677888888 59999999999999997 7887763
No 470
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=81.51 E-value=1.3 Score=48.64 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=29.8
Q ss_pred HHhcCcEEEEccCc-chHHHHHHHHHcccccCCCcceEEec
Q 001356 502 KLEEAKVFVVGSGA-LGCEFLKNLALMGVSCGNQGKLTITD 541 (1093)
Q Consensus 502 ~L~~~~VlivG~Gg-iG~e~lknLa~~Gv~~~~~g~i~liD 541 (1093)
.+.+++|+|||.|. +|..+++.|...|. .+++++
T Consensus 156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gA------tVtv~h 190 (288)
T 1b0a_A 156 DTFGLNAVVIGASNIVGRPMSMELLLAGC------TTTVTH 190 (288)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTC------EEEEEC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHCCC------eEEEEe
Confidence 35778999999997 69999999999986 888886
No 471
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=81.47 E-value=2.7 Score=43.93 Aligned_cols=29 Identities=28% Similarity=0.399 Sum_probs=24.4
Q ss_pred CcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEe
Q 001356 506 AKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTIT 540 (1093)
Q Consensus 506 ~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~li 540 (1093)
++|+|.| .|+||.++++.|+..|. +++++
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~------~v~~~ 31 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGC------KVLVN 31 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC------EEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC------EEEEE
Confidence 5788888 59999999999999997 66663
No 472
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=81.43 E-value=4.1 Score=46.09 Aligned_cols=99 Identities=18% Similarity=0.160 Sum_probs=0.0
Q ss_pred hcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcE-------
Q 001356 107 FASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVA------- 179 (1093)
Q Consensus 107 ~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~------- 179 (1093)
...+|.|||+|..|+.+|..|+..| ..++++| |-....+.+++..-...
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G-~~V~l~~-----------------------r~~~~~~~i~~~~~~~~~l~g~~l 83 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKG-QKVRLWS-----------------------YESDHVDEMQAEGVNNRYLPNYPF 83 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTT-CCEEEEC-----------------------SCHHHHHHHHHHSSBTTTBTTCCC
T ss_pred cCCeEEEECccHHHHHHHHHHHHCC-CeEEEEe-----------------------CCHHHHHHHHHcCCCcccCCCCcc
Q ss_pred ---EEEeecccchhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEeeeecce
Q 001356 180 ---ISALTTELTKEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKSEVRGL 232 (1093)
Q Consensus 180 ---V~~~~~~l~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~~~~G~ 232 (1093)
+.+..+ ..+.+.+.|+||.+.-+...+..+.++.....+. ..|..-+.|+
T Consensus 84 ~~~i~~t~d--~~ea~~~aDvVilaVp~~~~~~vl~~i~~~l~~~-~ivvs~~kGi 136 (356)
T 3k96_A 84 PETLKAYCD--LKASLEGVTDILIVVPSFAFHEVITRMKPLIDAK-TRIAWGTKGL 136 (356)
T ss_dssp CTTEEEESC--HHHHHTTCCEEEECCCHHHHHHHHHHHGGGCCTT-CEEEECCCSC
T ss_pred CCCeEEECC--HHHHHhcCCEEEECCCHHHHHHHHHHHHHhcCCC-CEEEEEeCCC
No 473
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=81.41 E-value=7.6 Score=41.87 Aligned_cols=91 Identities=16% Similarity=0.178 Sum_probs=55.9
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccc--hHHHHHHHHHHHhCCCcEEEEeec
Q 001356 109 SNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGK--NRALASIQKLQELNNAVAISALTT 185 (1093)
Q Consensus 109 s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk--~Ka~a~~~~L~eLNp~V~V~~~~~ 185 (1093)
++|+|.|+ |++|..+++.|+..|. ++++++.+.-. -.. .|++.+ +.+. .+.++ ....
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~--------------~~~~~~~~~~~-~~l~--~~~v~--~v~~ 62 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTIT--------------AANPETKEELI-DNYQ--SLGVI--LLEG 62 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCC--------------SSCHHHHHHHH-HHHH--HTTCE--EEEC
T ss_pred cEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcc--------------cCChHHHHHHH-HHHH--hCCCE--EEEe
Confidence 57999997 7899999999999994 67766543100 001 233322 2232 23444 3444
Q ss_pred ccch-----hhhcCCceEEEecC--CHHHHHHHHHHHHhcC
Q 001356 186 ELTK-----EKLSDFQAVVFTDI--SLEKAVEFDDYCHNHQ 219 (1093)
Q Consensus 186 ~l~~-----~~l~~~dvVV~~~~--~~~~~~~ln~~c~~~~ 219 (1093)
++++ ..+++.|+||.+.. .......+-++|++.+
T Consensus 63 D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g 103 (307)
T 2gas_A 63 DINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAG 103 (307)
T ss_dssp CTTCHHHHHHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHhCCCEEEECCcccccccHHHHHHHHHhcC
Confidence 4432 35778999998764 2445566777888775
No 474
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=81.41 E-value=0.84 Score=50.75 Aligned_cols=34 Identities=21% Similarity=0.316 Sum_probs=30.5
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
..||.|||+|.+|+.++..|+..|+ ..++++|.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~-----~~V~l~D~~ 37 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNL-----ADVVLFDIA 37 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-----ceEEEEeCC
Confidence 3689999999999999999999998 579999865
No 475
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=81.38 E-value=0.9 Score=50.83 Aligned_cols=33 Identities=33% Similarity=0.339 Sum_probs=29.1
Q ss_pred cCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 505 EAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 505 ~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
..+|+|||+|.+|+.++..|+..|. +++++|.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~------~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQ------SVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC------EEEEEeCC
Confidence 3689999999999999999999987 68888754
No 476
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=81.37 E-value=2.5 Score=46.72 Aligned_cols=31 Identities=26% Similarity=0.518 Sum_probs=26.5
Q ss_pred CcEEEEc-cCcchHHHHHHHHHc--ccccCCCcceEEecC
Q 001356 506 AKVFVVG-SGALGCEFLKNLALM--GVSCGNQGKLTITDD 542 (1093)
Q Consensus 506 ~~VlivG-~GgiG~e~lknLa~~--Gv~~~~~g~i~liD~ 542 (1093)
++|+|.| .|.||..+++.|+.. |. +++++|.
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~------~V~~~~r 38 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDV------HVTVLDK 38 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTC------EEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCC------EEEEEeC
Confidence 5899999 599999999999998 54 7888874
No 477
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=81.36 E-value=0.83 Score=54.84 Aligned_cols=32 Identities=25% Similarity=0.355 Sum_probs=28.6
Q ss_pred cEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCc
Q 001356 507 KVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDV 544 (1093)
Q Consensus 507 ~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~ 544 (1093)
+++|||.|.||+|++..|+++|. ++||+..+.
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~lG~------~VTii~~~~ 256 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSLGY------DVTVAVRSI 256 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTC------CEEEEESSC
T ss_pred eEEEECCCHHHHHHHHHHHhcCC------eEEEecccc
Confidence 69999999999999999999998 889886543
No 478
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=81.34 E-value=1.8 Score=46.71 Aligned_cols=90 Identities=18% Similarity=0.259 Sum_probs=55.0
Q ss_pred HhcCcEEEEcc-CcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCE
Q 001356 503 LEEAKVFVVGS-GALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLN 581 (1093)
Q Consensus 503 L~~~~VlivG~-GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~ 581 (1093)
+++++++|.|+ ||||.++++.|+..|. +++++|.+.-....+. ...+.+++.+.... .+
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~~~~~~~~~------------~~~~~~~~~~~~~~--~~ 63 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA------NVAIAAKSAVANPKLP------------GTIHSAAAAVNAAG--GQ 63 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCCSCCTTSC------------CCHHHHHHHHHHHT--SE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC------EEEEEeccchhhhhhH------------HHHHHHHHHHHhcC--Ce
Confidence 46788999984 8999999999999997 8999886543222111 11233344444443 35
Q ss_pred EEEEecccCcccc--ccch--hhhhccCCEEEEcc
Q 001356 582 TEALQIRANPETE--NVFN--DTFWENLNVVVNAL 612 (1093)
Q Consensus 582 i~~~~~~v~~~~~--~~~~--~~f~~~~DvVi~al 612 (1093)
+..+..++..... ..+. .+-+...|++|++.
T Consensus 64 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnA 98 (274)
T 3e03_A 64 GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNA 98 (274)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 6666666664321 1111 11235789888775
No 479
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=81.29 E-value=0.8 Score=50.46 Aligned_cols=35 Identities=20% Similarity=0.443 Sum_probs=0.0
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
|.+++|+|||+|.+|..+++.|...|. +++++|.+
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~------~V~~~d~~ 189 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGA------NVKVGARS 189 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCC------EEEEEECC
No 480
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=81.28 E-value=6.6 Score=44.17 Aligned_cols=31 Identities=23% Similarity=0.375 Sum_probs=26.3
Q ss_pred CeEEEEcC-ChhHHHHHHHHH-HhCCceEEEEeC
Q 001356 109 SNILISGM-QGLGAEIAKNLI-LAGVKSVTLHDE 140 (1093)
Q Consensus 109 s~VlIiG~-gglGseiaKnLv-laGVg~itLvD~ 140 (1093)
.+|||.|+ |++|.++++.|+ ..|. +|+++|.
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~-~V~~~~r 35 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVDS 35 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCC-EEEEEec
Confidence 47999985 779999999999 9995 6777775
No 481
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=81.27 E-value=2.5 Score=47.17 Aligned_cols=73 Identities=14% Similarity=0.133 Sum_probs=50.0
Q ss_pred hcCcEEEEccCcchHHHHHHHHHc-ccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEE
Q 001356 504 EEAKVFVVGSGALGCEFLKNLALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNT 582 (1093)
Q Consensus 504 ~~~~VlivG~GgiG~e~lknLa~~-Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i 582 (1093)
...+|+|||+|++|..+++.|... ++ .++++.|. ...|++.+++.+.... +.+
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~-----~~V~v~~r-------------------~~~~a~~la~~~~~~~--~~~ 177 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDI-----GEVKAYDV-------------------REKAAKKFVSYCEDRG--ISA 177 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCC-----CEEEEECS-------------------SHHHHHHHHHHHHHTT--CCE
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCc-----cEEEEECC-------------------CHHHHHHHHHHHHhcC--ceE
Confidence 467999999999999999999874 56 68888762 2346666666665421 333
Q ss_pred EEEecccCccccccchhhhhccCCEEEEccCC
Q 001356 583 EALQIRANPETENVFNDTFWENLNVVVNALDN 614 (1093)
Q Consensus 583 ~~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn 614 (1093)
. +. + . .+.. ++|+|+.|+-+
T Consensus 178 ~-~~-----~----~-~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 178 S-VQ-----P----A-EEAS-RCDVLVTTTPS 197 (322)
T ss_dssp E-EC-----C----H-HHHT-SSSEEEECCCC
T ss_pred E-EC-----C----H-HHHh-CCCEEEEeeCC
Confidence 2 21 1 1 2345 79999999865
No 482
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=81.18 E-value=0.44 Score=56.30 Aligned_cols=45 Identities=18% Similarity=0.308 Sum_probs=35.3
Q ss_pred HHHhcCcEEEEccCcchHHHHHHHHH----cccccC-CCcceEEecCCcc
Q 001356 501 KKLEEAKVFVVGSGALGCEFLKNLAL----MGVSCG-NQGKLTITDDDVI 545 (1093)
Q Consensus 501 ~~L~~~~VlivG~GgiG~e~lknLa~----~Gv~~~-~~g~i~liD~D~I 545 (1093)
++|+..||++.|+|+-|+.+++.|.. .|+.-. -..+|.++|..-+
T Consensus 278 k~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gl 327 (555)
T 1gq2_A 278 NRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGL 327 (555)
T ss_dssp SCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEE
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCe
Confidence 46888999999999999999999998 675100 0279999997644
No 483
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=81.16 E-value=2.9 Score=45.73 Aligned_cols=32 Identities=25% Similarity=0.373 Sum_probs=27.0
Q ss_pred CeEEEEcCChhHHHHHHHHHHh-----CCceEEEEeC
Q 001356 109 SNILISGMQGLGAEIAKNLILA-----GVKSVTLHDE 140 (1093)
Q Consensus 109 s~VlIiG~gglGseiaKnLvla-----GVg~itLvD~ 140 (1093)
.+|+|||+|.+|+.+|..|..+ |-..++++|.
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 3799999999999999999998 7336777763
No 484
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=81.16 E-value=2.5 Score=41.14 Aligned_cols=40 Identities=20% Similarity=0.176 Sum_probs=29.5
Q ss_pred HHHHhhcCeEEEEcC----ChhHHHHHHHHHHhCCceEEEEeCCc
Q 001356 102 TMRRLFASNILISGM----QGLGAEIAKNLILAGVKSVTLHDEGV 142 (1093)
Q Consensus 102 ~q~kL~~s~VlIiG~----gglGseiaKnLvlaGVg~itLvD~d~ 142 (1093)
+-.-++..+|.|||+ |.+|..+++||...|. ++.-+|+..
T Consensus 8 ~~~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~-~V~~vnp~~ 51 (138)
T 1y81_A 8 GSNSKEFRKIALVGASKNPAKYGNIILKDLLSKGF-EVLPVNPNY 51 (138)
T ss_dssp ------CCEEEEETCCSCTTSHHHHHHHHHHHTTC-EEEEECTTC
T ss_pred cccccCCCeEEEEeecCCCCCHHHHHHHHHHHCCC-EEEEeCCCC
Confidence 445677889999999 9999999999999999 466666653
No 485
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=81.11 E-value=0.94 Score=49.50 Aligned_cols=32 Identities=28% Similarity=0.379 Sum_probs=28.6
Q ss_pred CcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 506 AKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 506 ~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.+|+|||+|.+|+.++..|+..|. +++++|.+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~------~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN------DVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC------cEEEEECC
Confidence 589999999999999999999986 78888743
No 486
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=81.11 E-value=0.82 Score=53.84 Aligned_cols=35 Identities=23% Similarity=0.361 Sum_probs=31.9
Q ss_pred HhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 503 LEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 503 L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
|.+++|+|+|+|+||..+++.|+..|. +++++|.+
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA------~Viv~D~~ 297 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGA------RVIVTEID 297 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC------EEEEEcCC
Confidence 678999999999999999999999998 88888754
No 487
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=80.99 E-value=5.7 Score=46.72 Aligned_cols=92 Identities=15% Similarity=0.066 Sum_probs=60.9
Q ss_pred hcCeEEEEcCChh-HHHHHHHHHHh--CC--ceEEEEeCCcceeeCCCcceecccCcccchHHHHHH----HHHHHhCCC
Q 001356 107 FASNILISGMQGL-GAEIAKNLILA--GV--KSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASI----QKLQELNNA 177 (1093)
Q Consensus 107 ~~s~VlIiG~ggl-GseiaKnLvla--GV--g~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~----~~L~eLNp~ 177 (1093)
+..+|.|||+|++ |..+|..|+.. +. ..|+|+|-+. .|++... ..+......
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~-------------------e~~~~~~~~~~~~l~~~~~~ 87 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK-------------------ERQDRIAGACDVFIREKAPD 87 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCH-------------------HHHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCH-------------------HHHHHHHHHHHHHhccCCCC
Confidence 3468999999998 66688888887 65 5699998633 1222222 222345556
Q ss_pred cEEEEeecccchhhhcCCceEEEecCC--HHHHHHHHHHHHhcC
Q 001356 178 VAISALTTELTKEKLSDFQAVVFTDIS--LEKAVEFDDYCHNHQ 219 (1093)
Q Consensus 178 V~V~~~~~~l~~~~l~~~dvVV~~~~~--~~~~~~ln~~c~~~~ 219 (1093)
.+|.+.. ++ .+-+++.|+||.+... .+.+.+-..+..++|
T Consensus 88 ~~I~~t~-D~-~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g 129 (472)
T 1u8x_X 88 IEFAATT-DP-EEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYG 129 (472)
T ss_dssp SEEEEES-CH-HHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTT
T ss_pred CEEEEEC-CH-HHHHcCCCEEEEcCCCccccccchhhhhhhhcC
Confidence 6777642 22 2467899999998863 445566667788888
No 488
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=80.98 E-value=2.4 Score=45.42 Aligned_cols=31 Identities=23% Similarity=0.383 Sum_probs=25.1
Q ss_pred hcCcEEEEc-cCcchHHHHHHHHHcccccCCCcceEEe
Q 001356 504 EEAKVFVVG-SGALGCEFLKNLALMGVSCGNQGKLTIT 540 (1093)
Q Consensus 504 ~~~~VlivG-~GgiG~e~lknLa~~Gv~~~~~g~i~li 540 (1093)
.+++|+|.| .||||.++++.|+..|. +++++
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~------~V~~~ 56 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGW------RVGVN 56 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTC------EEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC------EEEEE
Confidence 345677778 59999999999999998 66665
No 489
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=80.97 E-value=1 Score=48.64 Aligned_cols=107 Identities=13% Similarity=0.111 Sum_probs=56.0
Q ss_pred eEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecccc
Q 001356 110 NILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTELT 188 (1093)
Q Consensus 110 ~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~l~ 188 (1093)
+|+|.|+ |.+|+.+++.|. .| .+++.++... . +-..|+... +.+.+.++...+++-|+.-.....
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g-~~V~~~~r~~--------~--~~~~D~~d~--~~~~~~~~~~~~d~vih~a~~~~~ 67 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PV-GNLIALDVHS--------K--EFCGDFSNP--KGVAETVRKLRPDVIVNAAAHTAV 67 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TT-SEEEEECTTC--------S--SSCCCTTCH--HHHHHHHHHHCCSEEEECCCCCCH
T ss_pred eEEEECCCCHHHHHHHHHhh-cC-CeEEEecccc--------c--cccccCCCH--HHHHHHHHhcCCCEEEECcccCCH
Confidence 6999997 779999999999 78 5788877643 0 112344322 233334443333332222110000
Q ss_pred hhhhcCCceEEEecCCHHHHHHHHHHHHhcCCCcceEeeeecceeE
Q 001356 189 KEKLSDFQAVVFTDISLEKAVEFDDYCHNHQPPIAFIKSEVRGLFG 234 (1093)
Q Consensus 189 ~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ip~I~~~~~G~~G 234 (1093)
.......+-. -..+......+-+.|++.+ +.||..++.+.+|
T Consensus 68 ~~~~~~~~~~--~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~vy~ 109 (299)
T 1n2s_A 68 DKAESEPELA--QLLNATSVEAIAKAANETG--AWVVHYSTDYVFP 109 (299)
T ss_dssp HHHTTCHHHH--HHHHTHHHHHHHHHHTTTT--CEEEEEEEGGGSC
T ss_pred hhhhcCHHHH--HHHHHHHHHHHHHHHHHcC--CcEEEEecccEEe
Confidence 0000000000 0001223456777888888 7889888877765
No 490
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=80.96 E-value=4.1 Score=44.04 Aligned_cols=100 Identities=13% Similarity=0.138 Sum_probs=60.2
Q ss_pred cCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCCcceeeCCCcceecccCcccchHHHHHHHHHHHhCCCcEEEEeecc
Q 001356 108 ASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEGVVELWDLSSNFIFSEDDVGKNRALASIQKLQELNNAVAISALTTE 186 (1093)
Q Consensus 108 ~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d~V~~sdL~rqf~~~~~diGk~Ka~a~~~~L~eLNp~V~V~~~~~~ 186 (1093)
.++|+|.|+ |++|..+++.|...|-.+|++++.+.- +.++ +.+.. +.++ ....+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~-----------------~~~~----~~l~~--~~~~--~~~~D 59 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR-----------------KKAA----KELRL--QGAE--VVQGD 59 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTT-----------------SHHH----HHHHH--TTCE--EEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCC-----------------CHHH----HHHHH--CCCE--EEEec
Confidence 468999998 779999999999988446777664211 1111 22322 2343 33444
Q ss_pred cch-----hhhcCCceEEEecCC---------HHHHHHHHHHHHhcCCCcceEeeeeccee
Q 001356 187 LTK-----EKLSDFQAVVFTDIS---------LEKAVEFDDYCHNHQPPIAFIKSEVRGLF 233 (1093)
Q Consensus 187 l~~-----~~l~~~dvVV~~~~~---------~~~~~~ln~~c~~~~~~ip~I~~~~~G~~ 233 (1093)
+++ ..+++.|+||.+... ......+-+.|++.+. ..+|.+++.+.+
T Consensus 60 ~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv-~~iv~~S~~~~~ 119 (299)
T 2wm3_A 60 QDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGL-HYVVYSGLENIK 119 (299)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTC-SEEEECCCCCHH
T ss_pred CCCHHHHHHHHhcCCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCC-CEEEEEcCcccc
Confidence 432 356788999987542 1223456677877772 246666665544
No 491
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=80.95 E-value=0.98 Score=50.74 Aligned_cols=36 Identities=28% Similarity=0.347 Sum_probs=31.9
Q ss_pred HHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 502 KLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 502 ~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.|.+++|.|||+|.||..+++.|..+|+ +++.+|..
T Consensus 142 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~------~V~~~d~~ 177 (333)
T 1dxy_A 142 ELGQQTVGVMGTGHIGQVAIKLFKGFGA------KVIAYDPY 177 (333)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC------EEEEECCC
Confidence 4678899999999999999999999987 78888854
No 492
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=80.95 E-value=0.68 Score=51.85 Aligned_cols=51 Identities=20% Similarity=0.165 Sum_probs=38.9
Q ss_pred hhhhhhc--cCHHHHHHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCCc
Q 001356 91 HSRQLAV--YGRETMRRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEGV 142 (1093)
Q Consensus 91 YsRQi~l--~G~~~q~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d~ 142 (1093)
|+|+++- |.......|..++|.|||+|.+|..+|+.|...|. +|+.+|...
T Consensus 121 ~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~ 173 (324)
T 3hg7_A 121 YREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHFGM-KVLGVSRSG 173 (324)
T ss_dssp HHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred HHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhCCC-EEEEEcCCh
Confidence 4444432 54333347889999999999999999999999998 688888644
No 493
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=80.88 E-value=1.6 Score=49.59 Aligned_cols=36 Identities=17% Similarity=0.185 Sum_probs=32.4
Q ss_pred HhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeC
Q 001356 105 RLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDE 140 (1093)
Q Consensus 105 kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~ 140 (1093)
.|..++|.|||+|.+|..+|+.|...|..++..+|.
T Consensus 161 ~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~ 196 (364)
T 2j6i_A 161 DIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDY 196 (364)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECS
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 588999999999999999999999999766888875
No 494
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=80.84 E-value=0.59 Score=52.18 Aligned_cols=51 Identities=16% Similarity=0.035 Sum_probs=38.6
Q ss_pred hhhhhhhc--cCHHHHHHhhcCeEEEEcCChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 90 LHSRQLAV--YGRETMRRLFASNILISGMQGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 90 ~YsRQi~l--~G~~~q~kL~~s~VlIiG~gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
.|+|+.+- |.......|..++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 119 ~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~-~V~~~dr~ 171 (315)
T 3pp8_A 119 DYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAWGF-PLRCWSRS 171 (315)
T ss_dssp HHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred HHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 34444432 54333456889999999999999999999999998 67778754
No 495
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=80.82 E-value=2.6 Score=45.97 Aligned_cols=29 Identities=21% Similarity=0.351 Sum_probs=23.0
Q ss_pred CeEEEEcC-ChhHHHHHHHHHHhCCceEEEEe
Q 001356 109 SNILISGM-QGLGAEIAKNLILAGVKSVTLHD 139 (1093)
Q Consensus 109 s~VlIiG~-gglGseiaKnLvlaGVg~itLvD 139 (1093)
++|||.|+ |++|.++++.|...| .++.++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~ 31 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVID 31 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEE
Confidence 37999996 779999999999999 444444
No 496
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=80.79 E-value=0.9 Score=47.83 Aligned_cols=89 Identities=9% Similarity=0.064 Sum_probs=55.6
Q ss_pred hcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEE
Q 001356 504 EEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTE 583 (1093)
Q Consensus 504 ~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~ 583 (1093)
...+|+|+|+|.+|..+++.|...| - ++++|.|.- ++ +.+. +++ .
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g------~-v~vid~~~~-------------------~~----~~~~---~~~--~ 52 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSE------V-FVLAEDENV-------------------RK----KVLR---SGA--N 52 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSE------E-EEEESCGGG-------------------HH----HHHH---TTC--E
T ss_pred CCCEEEEECCChHHHHHHHHHHhCC------e-EEEEECCHH-------------------HH----HHHh---cCC--e
Confidence 3568999999999999999997654 3 778874321 11 1222 233 3
Q ss_pred EEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccc
Q 001356 584 ALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQ 629 (1093)
Q Consensus 584 ~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~ 629 (1093)
.+...... ...+...-++++|.||.++++...-..+...+...+
T Consensus 53 ~i~gd~~~--~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~ 96 (234)
T 2aef_A 53 FVHGDPTR--VSDLEKANVRGARAVIVDLESDSETIHCILGIRKID 96 (234)
T ss_dssp EEESCTTC--HHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHC
T ss_pred EEEcCCCC--HHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHC
Confidence 44444332 122222336789999999999877777666666544
No 497
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=80.78 E-value=4.5 Score=47.91 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=27.5
Q ss_pred cCeEEEEcC-ChhHHHHHHHHHHhCCceEEEEeCC
Q 001356 108 ASNILISGM-QGLGAEIAKNLILAGVKSVTLHDEG 141 (1093)
Q Consensus 108 ~s~VlIiG~-gglGseiaKnLvlaGVg~itLvD~d 141 (1093)
..+|||.|+ |.+|+.+++.|...|. +|+.++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~-~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH-EVIQLVRK 180 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 458999995 7799999999999997 67777654
No 498
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=80.77 E-value=0.86 Score=50.23 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=31.8
Q ss_pred HHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 502 KLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 502 ~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.|.+++|.|||+|.+|..+++.|..+|+ +++.+|..
T Consensus 119 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~------~V~~~dr~ 154 (290)
T 3gvx_A 119 LLYGKALGILGYGGIGRRVAHLAKAFGM------RVIAYTRS 154 (290)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTC------EEEEECSS
T ss_pred eeecchheeeccCchhHHHHHHHHhhCc------EEEEEecc
Confidence 3567899999999999999999999998 88888854
No 499
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=80.61 E-value=2.9 Score=45.98 Aligned_cols=99 Identities=15% Similarity=0.164 Sum_probs=58.7
Q ss_pred CcEEEEc-cCcchHHHHHHHHHc-ccccCCCcceEEecCCccccccCCcccccccCccccchHHHHHHHHHHhCCCCEEE
Q 001356 506 AKVFVVG-SGALGCEFLKNLALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAALINPHLNTE 583 (1093)
Q Consensus 506 ~~VlivG-~GgiG~e~lknLa~~-Gv~~~~~g~i~liD~D~Ie~sNLnRQflf~~~dvG~~Ka~va~~~l~~~np~~~i~ 583 (1093)
.||.|+| +|.+|..+++.+... ++ --+-++|...- . +.-.|+|.. + .+. ...+.
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~-----eLvg~vd~~~~---~------~~G~d~gel----~-----G~~-~~gv~ 77 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDV-----ELCAVLVRKGS---S------FVDKDASIL----I-----GSD-FLGVR 77 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSE-----EEEEEBCCTTC---T------TTTSBGGGG----T-----TCS-CCSCB
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCC-----EEEEEEecCCc---c------ccccchHHh----h-----ccC-cCCce
Confidence 5899999 899999999988753 44 22334454211 0 011244421 0 000 01111
Q ss_pred EEecccCccccccchhhhhccCCEEEEccCCHHHHHHHhhcccccccceEeccccCc
Q 001356 584 ALQIRANPETENVFNDTFWENLNVVVNALDNVNARLYIDQRCLYFQKPLLESGTLGA 640 (1093)
Q Consensus 584 ~~~~~v~~~~~~~~~~~f~~~~DvVi~alDn~~aR~~i~~~c~~~~~pli~sgt~G~ 640 (1093)
+..+- ++.+.++|+||+++ .+.+-...-..|.++++|+| .||.|+
T Consensus 78 -----v~~dl-----~~ll~~aDVvIDFT-~p~a~~~~~~~~l~~Gv~vV-iGTTG~ 122 (288)
T 3ijp_A 78 -----ITDDP-----ESAFSNTEGILDFS-QPQASVLYANYAAQKSLIHI-IGTTGF 122 (288)
T ss_dssp -----CBSCH-----HHHTTSCSEEEECS-CHHHHHHHHHHHHHHTCEEE-ECCCCC
T ss_pred -----eeCCH-----HHHhcCCCEEEEcC-CHHHHHHHHHHHHHcCCCEE-EECCCC
Confidence 11111 24557899999998 56665666679999999999 577775
No 500
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=80.61 E-value=1 Score=50.53 Aligned_cols=36 Identities=25% Similarity=0.212 Sum_probs=31.8
Q ss_pred HHhcCcEEEEccCcchHHHHHHHHHcccccCCCcceEEecCC
Q 001356 502 KLEEAKVFVVGSGALGCEFLKNLALMGVSCGNQGKLTITDDD 543 (1093)
Q Consensus 502 ~L~~~~VlivG~GgiG~e~lknLa~~Gv~~~~~g~i~liD~D 543 (1093)
.|.+++|.|||+|.||..+++.|...|+ +++.+|..
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~------~V~~~d~~ 178 (331)
T 1xdw_A 143 EVRNCTVGVVGLGRIGRVAAQIFHGMGA------TVIGEDVF 178 (331)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC------EEEEECCC
Confidence 4678899999999999999999999887 78888853
Done!