Your job contains 1 sequence.
>001361
MATTGAAAAPVERDIELAITALKKGAHLLKYGRRGKPKFCPFRLANDESILIWISGKEEK
HLKLSHVSRIIPGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKA
LISRSHYRKGRAESRSDEVSSVATSPRAHTQRSSPLSSPFGSGGSSQKDGLDPLHLHTSY
ESPPKNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRV
SLSSAVSSSSQGSGHDDGDSLGDVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE
SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE
LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG
PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV
EVMVGSSSSSNCSSGKLFTWGDGDRGRLGHGDKEARLVPTCVAALVEPNFCQVSCGHSLT
VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE
VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM
CSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKAT
ETSSSSHSTVSRRGSMNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQE
FNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMSRATSPTSRRSSPP
RATTPTPTLSGLASPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEA
LAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQ
PSSPLTFQGAIPNGSNSLILSNGSDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDE
WVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDK
SSVSIGREGLAH
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001361
(1092 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 3488 0. 1
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 1840 7.7e-254 4
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 1652 7.7e-254 4
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 1535 1.2e-217 3
TAIR|locus:2079147 - symbol:AT3G47660 "AT3G47660" species... 1819 3.2e-199 2
TAIR|locus:2009739 - symbol:AT1G65920 species:3702 "Arabi... 1178 3.0e-179 3
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 476 9.8e-46 2
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 461 4.7e-39 1
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 461 4.7e-39 1
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 460 6.1e-39 1
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 457 9.0e-39 1
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 457 9.2e-39 1
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 458 1.0e-38 1
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 457 1.3e-38 1
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 456 1.6e-38 1
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 454 2.6e-38 1
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 454 2.7e-38 1
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 457 3.5e-36 2
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 455 3.6e-34 3
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 404 5.4e-34 1
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 403 9.6e-34 1
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 449 1.0e-33 3
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 448 1.2e-33 3
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 450 1.3e-33 3
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 449 1.6e-33 3
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 448 1.6e-33 3
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 397 4.4e-33 1
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 407 6.1e-33 2
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 370 6.6e-33 1
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 395 7.2e-33 1
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 394 9.1e-33 1
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 394 9.1e-33 1
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 394 9.2e-33 1
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 394 9.2e-33 1
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 394 9.2e-33 1
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 445 1.6e-32 4
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 401 2.8e-32 2
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 403 3.5e-32 2
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 385 3.9e-32 3
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 399 9.6e-32 2
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 391 1.6e-31 2
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 381 2.4e-31 1
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 317 4.5e-31 3
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 377 6.3e-31 1
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 390 6.4e-31 2
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 373 1.3e-30 2
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 377 5.4e-30 2
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 357 1.2e-28 1
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 350 5.3e-28 1
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 353 5.6e-28 2
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 348 8.0e-28 1
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 326 1.0e-27 1
TAIR|locus:2099986 - symbol:AT3G55580 species:3702 "Arabi... 333 2.2e-27 1
UNIPROTKB|Q86SG6 - symbol:NEK8 "Serine/threonine-protein ... 319 5.0e-25 1
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 294 9.1e-25 1
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 331 2.3e-24 2
UNIPROTKB|E1B827 - symbol:NEK8 "Uncharacterized protein" ... 311 3.8e-24 1
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 322 8.4e-24 2
UNIPROTKB|E2QZC2 - symbol:NEK8 "Uncharacterized protein" ... 306 1.4e-23 1
MGI|MGI:1890646 - symbol:Nek8 "NIMA (never in mitosis gen... 265 1.6e-23 2
UNIPROTKB|F1RNC5 - symbol:NEK8 "Uncharacterized protein" ... 304 2.2e-23 1
ZFIN|ZDB-GENE-070912-423 - symbol:rpgra "retinitis pigmen... 321 4.3e-23 3
TAIR|locus:2090136 - symbol:AT3G15430 "AT3G15430" species... 295 6.3e-23 1
MGI|MGI:1344037 - symbol:Rpgr "retinitis pigmentosa GTPas... 301 9.6e-23 1
RGD|1306897 - symbol:Nek8 "NIMA-related kinase 8" species... 268 1.5e-22 2
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 280 1.7e-22 1
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 282 1.7e-22 1
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 291 3.0e-22 1
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 309 5.6e-22 2
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 288 6.4e-22 1
UNIPROTKB|E1BRZ2 - symbol:NEK8 "Uncharacterized protein" ... 290 7.2e-22 1
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 305 1.2e-21 2
UNIPROTKB|Q9N1T2 - symbol:RPGR "X-linked retinitis pigmen... 304 1.8e-21 2
TAIR|locus:2156233 - symbol:RUG2 "RCC1/UVR8/GEF-like 2" s... 214 1.9e-21 2
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 289 2.0e-21 1
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 282 2.6e-21 1
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 278 7.2e-21 1
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 277 9.3e-21 1
UNIPROTKB|F1NDJ4 - symbol:RCCD1 "Uncharacterized protein"... 176 1.2e-20 2
ZFIN|ZDB-GENE-020509-1 - symbol:nek8 "NIMA (never in mito... 278 1.5e-20 1
UNIPROTKB|F1NAG9 - symbol:NEK9 "Uncharacterized protein" ... 253 2.1e-20 4
POMBASE|SPBC557.03c - symbol:pim1 "Ran GDP/GTP exchange f... 274 2.1e-20 1
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 272 3.3e-20 1
ZFIN|ZDB-GENE-090311-56 - symbol:si:ch73-190m4.1 "si:ch73... 277 3.7e-20 1
UNIPROTKB|E2R5W9 - symbol:RCCD1 "Uncharacterized protein"... 165 5.0e-20 2
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 268 1.1e-19 1
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 266 1.5e-19 1
TAIR|locus:2076532 - symbol:AT3G02300 "AT3G02300" species... 264 1.7e-19 1
DICTYBASE|DDB_G0284187 - symbol:Dd5P2 "inositol 5-phospha... 185 1.7e-19 3
ZFIN|ZDB-GENE-040426-2213 - symbol:rcc2 "regulator of chr... 263 2.6e-19 1
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 263 3.3e-19 1
FB|FBgn0002638 - symbol:Rcc1 "Regulator of chromosome con... 171 5.9e-19 2
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 260 7.0e-19 1
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 265 7.3e-19 1
TAIR|locus:2092190 - symbol:AT3G26100 species:3702 "Arabi... 258 1.2e-18 1
RGD|1307187 - symbol:Nek9 "NIMA-related kinase 9" species... 238 1.5e-18 2
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 270 1.5e-18 2
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 269 2.0e-18 2
MGI|MGI:1919784 - symbol:Rcc2 "regulator of chromosome co... 255 2.3e-18 1
UNIPROTKB|G3V1B4 - symbol:SERGEF "Secretion-regulating gu... 246 2.5e-18 1
WARNING: Descriptions of 199 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 3488 (1232.9 bits), Expect = 0., P = 0.
Identities = 697/1101 (63%), Positives = 803/1101 (72%)
Query: 1 MATTGAAAAPVERDIELAITALKKGAHLLKYGRRGKPKFCPFRLANDESILIWISGKEEK 60
MA+ + A PVERDIE AI ALKKGA+LLKYGRRGKPKFCPFRL+NDE++LIW SG EEK
Sbjct: 7 MASDLSRAGPVERDIEQAIIALKKGAYLLKYGRRGKPKFCPFRLSNDETVLIWFSGNEEK 66
Query: 61 HLKLSHVSRIIPGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKA 120
HLKLSHVSRII GQRTPIFQRYPRPEKEYQSFSLIY++RSLD+ICKDKDEAEVWFTGLKA
Sbjct: 67 HLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYSERSLDVICKDKDEAEVWFTGLKA 126
Query: 121 LISRSHYRKGRAESRSDEVSSVATSPRAHTQRXXXXXXXXXXXXXXQKDGLDPLHLHTSY 180
LIS H R R ESRSD S A SPR +T+R QKDG + L +H+ +
Sbjct: 127 LISHCHQRNRRTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNDSLQKDGSNHLRIHSPF 186
Query: 181 ESPPKNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLKGLSGDTFRV 240
ESPPKN LDKA SD LYA PPK PS+SA SV+S GGSD GH++G+ D FRV
Sbjct: 187 ESPPKNGLDKAFSDMALYAVPPKGFYPSDSATISVHS---GGSDSMHGHMRGMGMDAFRV 243
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVE 300
VFIWGE G+G+LGGG R GS +KMDS +PKA+E
Sbjct: 244 SMSSAVSSSSHGSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALE 303
Query: 301 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVE 360
S +VLDVQNIACGG+HA LVTKQGE FSWGEE GRLGHGVDS++ PKLIDAL N+E
Sbjct: 304 STIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIE 363
Query: 361 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 420
LVACGE H+CAVTLSGD+YTWG + FG+LGHGNE+S W+PK++N LEGIHVSS++CG
Sbjct: 364 LVACGEFHSCAVTLSGDLYTWGKGD--FGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACG 421
Query: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
P+HTAVVTSAGQLFTFGDGTFGVLGHGD+ SV PREVDSLKGLRTVRAACGVWHTAAVV
Sbjct: 422 PYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVV 481
Query: 481 EVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLT 540
EVMVG GKLFTW KE +LVPTCVAALVEPNFCQV+CGHSLT
Sbjct: 482 EVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLT 541
Query: 541 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 600
VALTT+GHVYTMGSPVYGQLG+ A+GK P RVEGKL K+FVEEIACG YHVAVLTSRTE
Sbjct: 542 VALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTE 601
Query: 601 VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 660
VYTWGKG+NGRLGHGD DDRN P+LVE+LKDKQVKSI CGT+FTAA+C+H+W SG+DQSM
Sbjct: 602 VYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWASGMDQSM 661
Query: 661 CSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKAT 720
CSGCR PF+FKRKRHNCYNCGLV+CH+C+SKKS+KA MAPNPNKPYRVCD CF KL K
Sbjct: 662 CSGCRQPFSFKRKRHNCYNCGLVFCHSCTSKKSLKACMAPNPNKPYRVCDKCFNKLKKTM 721
Query: 721 EXXXXXXXXXXXXXXMNQGFNEAVEHGENFVSRSHVQFG--TSMESLKKVESGSSKRNKK 778
E +NQG ++ ++ + F SRS Q + MES+++V+S K+NKK
Sbjct: 722 ETDPSSHSSLSRRGSINQG-SDPIDKDDKFDSRSDGQLARFSLMESMRQVDS-RHKKNKK 779
Query: 779 QEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIMXXXXXXXXXXXX 838
EFN +R P+P+G SQ ALN +KS NPVFG++KKFFSAS+PGSRI+
Sbjct: 780 YEFNSSRVSPIPSGSSQRGALNIAKSFNPVFGASKKFFSASVPGSRIVSRATSPISRRPS 839
Query: 839 XXXXXXXXXXLSGLASPKIVVDDAKRT----SEEVIKLRAQVEELTRKSQLQEIELERTT 894
LSGLA+PK VVDD KRT S+EV+KLR+QVE LTRK+QLQE+ELERTT
Sbjct: 840 PPRSTTPTPTLSGLATPKFVVDDTKRTNDNLSQEVVKLRSQVESLTRKAQLQEVELERTT 899
Query: 895 RQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVR------NSNSFHSSP- 947
+QLKEALA+ EET +C+AAK+VIKSLTAQLKDMAE LPVG+ R + NSF SSP
Sbjct: 900 KQLKEALAITNEETTRCKAAKEVIKSLTAQLKDMAERLPVGSARTVKSPPSLNSFGSSPG 959
Query: 948 -TPAWDVSSAAIEQPSSPLTFQGAIPXXXXXXXXXXXXDFGDNRSPSQTEASHCEATTKN 1006
+++ + A Q S P P FG+ EAT +
Sbjct: 960 RIDPFNILNQANSQESEPNGI--TTPMFSNGTMTPA---FGNG-----------EATNEA 1003
Query: 1007 KNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANR 1066
+N EWVEQDE GVYITL AL GG +DLKRVRFSRK+FSE QAEQWWA NR
Sbjct: 1004 RNEK---------EWVEQDEPGVYITLTALAGGARDLKRVRFSRKRFSEIQAEQWWADNR 1054
Query: 1067 ARVYQQYNVSMVDKSSVSIGR 1087
RVY+QYNV MVDK+S + R
Sbjct: 1055 GRVYEQYNVRMVDKASEDLPR 1075
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 1840 (652.8 bits), Expect = 7.7e-254, Sum P(4) = 7.7e-254
Identities = 359/719 (49%), Positives = 476/719 (66%)
Query: 224 DGRTGHLKGLSGDTFRVXXXXXXXXXXXXXXXXXXXXXXXVFIWGECTGDGILGGGIHRS 283
D + K D FRV V+IWGE D ++ GI ++
Sbjct: 200 DNKNMQTKVSGSDGFRVSVSSAQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKN 259
Query: 284 GSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS 343
SY + D VPK +ES +VLDV IACG RHAA VT+QGE+F+WGEE GGRLGHG+
Sbjct: 260 ASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGK 319
Query: 344 DVSHPKLIDALK-NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP 402
DV HP+L+++L +V+ VACGE HTCAVTL+G++YTWG N GLLGHG+++S W+P
Sbjct: 320 DVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIP 379
Query: 403 KKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK 462
K++ G LEG+HV+SVSCGPWHTA++TS G+LFTFGDGTFGVLGHGD+ +V PREV+SL
Sbjct: 380 KRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLS 439
Query: 463 GLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCV 522
GLRT+ +CGVWHTAAVVE++V GKLFTW K+ RL PTCV
Sbjct: 440 GLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCV 499
Query: 523 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFV 582
AL++ NF +++CGHSLTV LTT+G V+TMGS VYGQLG+ + +GKLP VE KL FV
Sbjct: 500 PALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFV 559
Query: 583 EEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTS 642
EEI+CG YHVA LTSR EVYTWGKGANGRLGHGD +DR P++VEALKD+ VK I CG++
Sbjct: 560 EEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSN 619
Query: 643 FTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNP 702
+TAAICLHKWVSG +QS CS CR+ F F RKRHNCYNCGLV+CH+CSSKK+ +A++AP+
Sbjct: 620 YTAAICLHKWVSGAEQSQCSTCRLAFGFTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSA 679
Query: 703 NKPYRVCDNCFGKLTKATEXXXXXXXXXXXXXXMNQGFNEAVEHGENFVSRSHVQFGTS- 761
+ YRVCD+C+ KL+K +E + + ++ E +++ FGTS
Sbjct: 680 GRLYRVCDSCYVKLSKVSEINDTNRRNSAVPRLSGEN-RDRLDKSEIRLAK----FGTSN 734
Query: 762 MESLKKVESGSSKRNKKQE-FNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASL 820
M+ +K+++S ++K+ KK + F+ R LP+ + +A+ ++ + +T K A
Sbjct: 735 MDLIKQLDSKAAKQGKKTDTFSLGRNSQLPSLLQLKDAVQSNIGD--MRRATPKL--AQA 790
Query: 821 PGSRIMXXXXXXXXXXXXXXXXXXXXXXLSGLASPKIVVDDAKRTSE----EVIKLRAQV 876
P S I SGL P + D+ K+T+E E++KLR QV
Sbjct: 791 P-SGISSRSVSPFSRRSSPPRSATPMPSTSGLYFPVGIADNMKKTNEILNQEIVKLRTQV 849
Query: 877 EELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVG 935
+ LT+K + QE+EL+ + ++ +EALA+A EE+AK RAAK+ IKSL AQLKD+AE LP G
Sbjct: 850 DSLTQKCEFQEVELQNSVKKTQEALALAEEESAKSRAAKEAIKSLIAQLKDVAEKLPPG 908
Score = 393 (143.4 bits), Expect = 7.7e-254, Sum P(4) = 7.7e-254
Identities = 98/233 (42%), Positives = 123/233 (52%)
Query: 12 ERDIELAITALKKGAHLLKYGRRGKPKFCPFRLANDESILIWISGKEEKHLKLSHVSRII 71
+ ++E A+ LKKG LLKYGR+GKPKF PFRL++DE LIWIS EK LKL+ VS+I+
Sbjct: 11 DHNLEQALITLKKGTQLLKYGRKGKPKFYPFRLSSDEKSLIWISSSGEKRLKLASVSKIV 70
Query: 72 PGQRTPIFQRYPRPEKEYQSFSLIYNDR--SLDLICKDKDEAEVWFTGLKALISRSHYRK 129
PGQRT +FQRY RPEK+Y SFSL+YN + SLDLICKDK EAE+W GLK LIS +
Sbjct: 71 PGQRTAVFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDKVEAEIWIGGLKTLISTGQGGR 130
Query: 130 GRAESRSDEVSSVATSPRAHTQRXXXXXXXXXXXXXXQKD---GLDPLHLHTSYESPPKN 186
+ + S SV S R T +DP+ S E P
Sbjct: 131 SKIDGWSGGGLSVDAS-RELTSSSPSSSSASASRGHSSPGTPFNIDPITSPKSAE-PEVP 188
Query: 187 VLDKALSDAVLYAAPPKVLLP-SESACGSVNSLSSGGSDGRTGHLKGLSGDTF 238
D S L + + S+ SV+S S S G GD +
Sbjct: 189 PTDSEKSHVALDNKNMQTKVSGSDGFRVSVSSAQSSSSHGSAADDSDALGDVY 241
Score = 223 (83.6 bits), Expect = 7.7e-254, Sum P(4) = 7.7e-254
Identities = 40/65 (61%), Positives = 52/65 (80%)
Query: 1020 EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVD 1079
EW+EQ E GVYITLVAL G +DL+RVRFSR++F E QAE WW+ NR +VY++YNV + +
Sbjct: 1024 EWIEQYEPGVYITLVALHDGTRDLRRVRFSRRRFGEHQAETWWSENREKVYEKYNVRVSE 1083
Query: 1080 KSSVS 1084
KS+ S
Sbjct: 1084 KSTAS 1088
Score = 42 (19.8 bits), Expect = 7.7e-254, Sum P(4) = 7.7e-254
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 933 PVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQ 968
P + RNSN++ + P + S + I + P FQ
Sbjct: 970 PRASERNSNAYPADPRLS--SSGSVISERIEPFQFQ 1003
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 1652 (586.6 bits), Expect = 7.7e-254, Sum P(4) = 7.7e-254
Identities = 313/582 (53%), Positives = 407/582 (69%)
Query: 216 NSLSSG----GSDGRTGHLKGLSGDTFRVXXXXXXXXXXXXXXXXXXXXXXXVFIWGECT 271
NS+SS SD ++G D FRV V+IWGE
Sbjct: 179 NSVSSERSHVASDSPNMLVRGTGSDAFRVSVSSVQSSSSHGSAPDDCDALGDVYIWGEVL 238
Query: 272 GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 331
+ + G ++ Y G + D +PK +ES VVLDV +IACG +HAALV++QGEVF+WGE
Sbjct: 239 CENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGE 298
Query: 332 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLL 391
GGRLGHG+ DV+ P+LI++L +++ VACGE HTCAVT++G++YTWG N GLL
Sbjct: 299 ASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLL 358
Query: 392 GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 451
GHG ++S W+PK+++GPLEG+ ++SVSCGPWHTA++TS GQLFTFGDGTFGVLGHGD+ +
Sbjct: 359 GHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKET 418
Query: 452 VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXX 511
V PREV+SL GLRT+ ACGVWH AA+VEV+V GKLFTW
Sbjct: 419 VFYPREVESLSGLRTIAVACGVWHAAAIVEVIV-THSSSSVSSGKLFTWGDGDKSRLGHG 477
Query: 512 XKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT 571
KE RL PTCV+AL++ F +V+CGHSLTV LTT+G VYTMGS VYGQLG+P A+GKLP
Sbjct: 478 DKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPC 537
Query: 572 RVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKD 631
VE KLTK+ VEEIACG YHVAVLTSR EV+TWGKGANGRLGHGD +DR P+LV+ALK+
Sbjct: 538 LVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKE 597
Query: 632 KQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSK 691
+ VK+I CG++FTAAICLHKWVSG +QS CS CR F F RKRHNCYNCGLV+CH+CSSK
Sbjct: 598 RHVKNIACGSNFTAAICLHKWVSGTEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSK 657
Query: 692 KSVKASMAPNPNKPYRVCDNCFGKLTKATEXXXXXXXXXXXXXXMNQGFN-EAVEHGENF 750
KS+KA++APNP KPYRVCD+C KL+K +E G N + ++ E
Sbjct: 658 KSLKAALAPNPGKPYRVCDSCHSKLSKVSEANIDSRKNVMPRLS---GENKDRLDKTEIR 714
Query: 751 VSRSHVQFGTSMESLKKVESGSSKRNKKQE-FN--RTRGLPL 789
+++S + ++++ +K++++ ++++ KK + F+ RT PL
Sbjct: 715 LAKSGIP--SNIDLIKQLDNRAARQGKKADTFSLVRTSQTPL 754
Score = 413 (150.4 bits), Expect = 7.7e-254, Sum P(4) = 7.7e-254
Identities = 85/130 (65%), Positives = 101/130 (77%)
Query: 18 AITALKKGAHLLKYGRRGKPKFCPFRLANDESILIWISGKEEKHLKLSHVSRIIPGQRTP 77
A+ ALKKGA LLKYGR+GKPKFCPFRL+NDE+ LIWIS EK LKL+ VS+I+PGQRT
Sbjct: 12 ALIALKKGAQLLKYGRKGKPKFCPFRLSNDETSLIWISNGGEKRLKLATVSKIVPGQRTA 71
Query: 78 IFQRYPRPEKEYQSFSLIYNDR--SLDLICKDKDEAEVWFTGLKALISRSHYRKGRAESR 135
+FQRY RP+K+Y SFSLIY++R +LDLICKDK EAEVW GLKALIS R + +
Sbjct: 72 VFQRYLRPDKDYLSFSLIYSNRKRTLDLICKDKVEAEVWIAGLKALISGQAGRS-KIDGW 130
Query: 136 SDEVSSVATS 145
SD S+A S
Sbjct: 131 SDGGLSIADS 140
Score = 229 (85.7 bits), Expect = 7.7e-254, Sum P(4) = 7.7e-254
Identities = 41/65 (63%), Positives = 53/65 (81%)
Query: 1020 EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVD 1079
EW+EQ E GVYITL+AL G +DLKRVRFSR++F E+QAE WW+ NR RVY++YN+ D
Sbjct: 1000 EWIEQYEPGVYITLLALGDGTRDLKRVRFSRRRFREQQAETWWSENRERVYEKYNIRGTD 1059
Query: 1080 KSSVS 1084
+SSV+
Sbjct: 1060 RSSVA 1064
Score = 204 (76.9 bits), Expect = 7.7e-254, Sum P(4) = 7.7e-254
Identities = 41/90 (45%), Positives = 66/90 (73%)
Query: 851 GLASPKIVVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGE 906
GL + + K+T+E EV++LRAQ E L + ++QE E++++ ++++EA+++A E
Sbjct: 805 GLGFSTSIAESLKKTNELLNQEVVRLRAQAESLRHRCEVQEFEVQKSVKKVQEAMSLAAE 864
Query: 907 ETAKCRAAKDVIKSLTAQLKDMAEMLPVGA 936
E+AK AAK+VIKSLTAQ+KD+A +LP GA
Sbjct: 865 ESAKSEAAKEVIKSLTAQVKDIAALLPPGA 894
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 1535 (545.4 bits), Expect = 1.2e-217, Sum P(3) = 1.2e-217
Identities = 278/494 (56%), Positives = 359/494 (72%)
Query: 228 GHLKGLSGDTFRVXXXXXXXXXXXXXXXXXXXXXXXVFIWGECTGDGILGGGIHRSGSYA 287
G++ S D FR+ V++WGE +GIL G + S
Sbjct: 177 GNMLRPSTDGFRISVSSTPSCSSGGSGPDDIESLGDVYVWGEVWTEGILPDG---TASNE 233
Query: 288 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 347
VK D P+ +ES VVLDV I CG RH ALVT+QGEVF+WGEE+GGRLGHG+ D+S
Sbjct: 234 TVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISR 293
Query: 348 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 407
PKL++ L N++ VACGE+HTC V+ SGD+++WG N GLLGHG+++S W+PK+++G
Sbjct: 294 PKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSG 353
Query: 408 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 467
PLEG+ V SV+CG WH+A+ T+ G+LFTFGDG FGVLGHG+R SVS P+EV SL GL+TV
Sbjct: 354 PLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTV 413
Query: 468 RAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVE 527
+ AC +WHTAA+VEVM G KLFTW KE L+PTCV++L++
Sbjct: 414 KVACSIWHTAAIVEVM-GQTATSMSSR-KLFTWGDGDKNRLGHGNKETYLLPTCVSSLID 471
Query: 528 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC 587
NF +++CGH+ TVALTT+GHV+TMG +GQLG+ ++GKLP V+ +L FVEEIAC
Sbjct: 472 YNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIAC 531
Query: 588 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
G +HVAVLTSR+EV+TWGKGANGRLGHGDT+D+ P+LVEAL+D+ VKS+ CG++FT++I
Sbjct: 532 GAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSI 591
Query: 648 CLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYR 707
C+HKWVSG DQS+CSGCR F F RKRHNCYNCGLV+CH CSSKK++KA++AP P KP+R
Sbjct: 592 CIHKWVSGADQSICSGCRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHR 651
Query: 708 VCDNCFGKLTKATE 721
VCD C+ KL KA E
Sbjct: 652 VCDACYSKL-KAAE 664
Score = 368 (134.6 bits), Expect = 1.2e-217, Sum P(3) = 1.2e-217
Identities = 76/124 (61%), Positives = 90/124 (72%)
Query: 12 ERDIELAITALKKGAHLLKYGRRGKPKFCPFRLANDESILIWISGKEEKHLKLSHVSRII 71
ERD++ A+ LKKG LLKY R+GKPKF FRL+ DE LIW S EEK LKL VSRI+
Sbjct: 12 ERDVDQALVVLKKGTQLLKYSRKGKPKFRAFRLSPDEKTLIWFSRGEEKGLKLFEVSRIV 71
Query: 72 PGQRTPIFQRYPRPEKEYQSFSLIYN--DRSLDLICKDKDEAEVWFTGLKALISRSHYRK 129
PGQRT R+ RPEK++ SFSL+YN +RSLDLICKDK E EVWF LK LI +S R+
Sbjct: 72 PGQRT----RFLRPEKDHLSFSLLYNNRERSLDLICKDKAETEVWFAALKFLIEKSRNRR 127
Query: 130 GRAE 133
R+E
Sbjct: 128 ARSE 131
Score = 239 (89.2 bits), Expect = 1.2e-217, Sum P(3) = 1.2e-217
Identities = 69/231 (29%), Positives = 113/231 (48%)
Query: 858 VVDDAKRTSE----EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRA 913
V+D ++T+E E+ KL +Q ++ Q E+ER + K+A +A +++K +A
Sbjct: 798 VIDSLRKTNEVMNQEMTKLHSQ-----QRCNNQGTEIERFQKAAKDASELAARQSSKHKA 852
Query: 914 AKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPX 973
A + +KS+ QLK++ E LP V S +F S + A +A +SPLT G
Sbjct: 853 ATEALKSVAEQLKELKEKLPP-EVSESEAFESINSQAEAYLNANKVSETSPLTTSGQEQE 911
Query: 974 XXXXXXXXXXXDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITL 1033
+ + PS + + ++++ + + G E EQ E GVY+T
Sbjct: 912 TYQKT---------EEQVPSNSSITETSSSSRAPSTEASSSRISGKESKEQFEPGVYVTY 962
Query: 1034 VALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVS 1084
G K +RVRFS+K+F E QAE WW N+ R+ + Y+ + SS S
Sbjct: 963 EVDMNGNKIFRRVRFSKKRFDEHQAEDWWTKNKDRLLKCYSSNSSSSSSSS 1013
Score = 48 (22.0 bits), Expect = 1.7e-197, Sum P(3) = 1.7e-197
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 907 ETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSP 964
E++ RA++ + SL QLKD+A + A++N+ F P + PSSP
Sbjct: 718 ESSNARASQ--VPSLQ-QLKDIAFPSSLSAIQNA--FKPVVAPTTTPPRTLVIGPSSP 770
Score = 43 (20.2 bits), Expect = 5.7e-197, Sum P(3) = 5.7e-197
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 939 NSNSFHSSPTPAWDVSSAAIEQPSSP 964
NS+S SS P S A + PS P
Sbjct: 1005 NSSSSSSSSNPTASDSPVAPQPPSDP 1030
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 1819 (645.4 bits), Expect = 3.2e-199, Sum P(2) = 3.2e-199
Identities = 361/711 (50%), Positives = 464/711 (65%)
Query: 8 AAPVERDIELAITALKKGAHLLKYGRRGKPKFCPFRLANDESILIWISGKEEKHLKLSHV 67
+ P +R+ E AI LKKGA+LLKYGRRGKPKF PFRL++DE L+W GK+EK LKLS V
Sbjct: 10 SVPTDRENEQAIAILKKGAYLLKYGRRGKPKFYPFRLSSDEIYLLWYCGKKEKRLKLSSV 69
Query: 68 SRIIPGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHY 127
+RIIPGQRT +F+RYP+P KEYQSFSLIY +RSLDL DKDEAE W T L+AL+SR++
Sbjct: 70 TRIIPGQRTAVFRRYPQPTKEYQSFSLIYGERSLDL---DKDEAEFWLTTLRALLSRNNS 126
Query: 128 RKGRAESRSDEVSSVATSPRAHTQRXXXXXXXXXXXXXXQKDGLDPLHLHTSYESPPKNV 187
SRS ++ + +Q ++ H + +P +
Sbjct: 127 SALVLHSRSRSLAPENGEQSSSSQNSKSNIRSVSSDTSYEEHAKKASGSHCN--TPQR-- 182
Query: 188 LDKALSDAVLYAAPPKVLLPSESACGSVNSLSSGGSDGRTGHLK-GLSGDTFRVXXXXXX 246
L K S+ + A K L E S + T H G+ DT +
Sbjct: 183 LGKVFSEVLSQTAVLKALSLDELVHKPHTSPPETIENRPTNHSSPGV--DTSKYSISSAV 240
Query: 247 XXXXXXXXXXXXXXXXXVFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLD 306
VF+WGE GDG+LGGG+H+SGS + + DSF+PK ++S V LD
Sbjct: 241 SSSSQGSTFEDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALD 300
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
Q+I+CG +A LVTKQG+++SWGEE GGRLGHGV S V HPKLID VEL CGE
Sbjct: 301 AQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGE 360
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 426
HTCAVT SGD+Y WG + N GLLG G+ S W P ++ G +EGI+V ++SCGPWHTA
Sbjct: 361 FHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAF 420
Query: 427 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGX 486
VTS G+LFTFGDGTFG LGHGDRIS + PREV++L G RT++AACGVWH+AAVV V G
Sbjct: 421 VTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVF-GE 479
Query: 487 XXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
GKLFTW E RL+P+CV L +F QV+CG S+TVAL+ +
Sbjct: 480 ATSS----GKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMS 535
Query: 547 GHVYTMGSPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 605
G VY MG+ DP + + P+ +EG L K+FV+E+ACG +H+AVL S+ EVYTWG
Sbjct: 536 GQVYAMGT------ADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWG 589
Query: 606 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCR 665
KG+NG+LGHGDT+ R P+LV+ALK KQV+ +VCG+++TA ICLHK ++G D + CSGCR
Sbjct: 590 KGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSTKCSGCR 649
Query: 666 IPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKL 716
PFN+ RK HNCYNCG V+C++C+SKKS+ A+MAP N+PYRVCD+C+ KL
Sbjct: 650 HPFNYMRKLHNCYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKL 700
Score = 132 (51.5 bits), Expect = 3.2e-199, Sum P(2) = 3.2e-199
Identities = 29/78 (37%), Positives = 52/78 (66%)
Query: 866 SEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQL 925
S E+ L+AQVEELT KS+ E EL +T+++L+ A+ +A ++ K ++++++++SLT QL
Sbjct: 877 SHEISVLKAQVEELTLKSKKLETELGKTSKKLEVAVLMARDDAEKIKSSEEIVRSLTLQL 936
Query: 926 KDMAEMLPVGAVRNSNSF 943
+ + R+ NSF
Sbjct: 937 MNTTKKEVDKTRRHRNSF 954
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 1178 (419.7 bits), Expect = 3.0e-179, Sum P(3) = 3.0e-179
Identities = 230/459 (50%), Positives = 307/459 (66%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
+ IWG TG ++ G +++ D+ PK +ESA + DVQ+I+ G +HAALVT+Q
Sbjct: 261 IMIWGAITG--LIDGSKNQN--------DALSPKLLESATMFDVQSISLGAKHAALVTRQ 310
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
GEVF WG G+LG V+ D+ HPK +++L+++ V VAC +H TCAVT SG++Y WG
Sbjct: 311 GEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWG- 369
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEG-IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 442
+ G + S +L +K++ L G + V SV+CG WHTA+VTS+GQLFT+G GTFG
Sbjct: 370 --IDGGTIEQSG--SQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFG 425
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXX 502
VLGHG SV+ P+EV+SL+ ++ + +CG WHTAA+VE GKLFTW
Sbjct: 426 VLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGD 485
Query: 503 XXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 562
+ +LVPTCV L++ +F +VSCG +LTVAL+ +G VYTMGS ++GQLG
Sbjct: 486 GDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGC 545
Query: 563 PKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 622
P+A K V G LT+ FV++IA G +HVAVLTS VYTWGKG NG+LG GD DRN
Sbjct: 546 PRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNS 605
Query: 623 PSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGL 682
P LVE L D+ V+SI CG + TAAICLHK +S DQ+ CS C+ F F R++HNCYNCGL
Sbjct: 606 PVLVEPLGDRLVESIACGLNLTAAICLHKEISLNDQTACSSCKSAFGFTRRKHNCYNCGL 665
Query: 683 VYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLTKATE 721
++C+ CSSKK+V AS+APN +K RVCD+CF L TE
Sbjct: 666 LFCNACSSKKAVNASLAPNKSKLSRVCDSCFDHLWSITE 704
Score = 348 (127.6 bits), Expect = 3.0e-179, Sum P(3) = 3.0e-179
Identities = 73/150 (48%), Positives = 96/150 (64%)
Query: 6 AAAAPVERDIELAITALKKGAHLLKYGRRGKPKFCPFRLANDESILIWISGKEEKHLKLS 65
+ P +R E AI ALKKGA LLK RRG PKFCPF+L+ DE LIW SG+EE+ L+LS
Sbjct: 7 SVTVPRDRTDEQAILALKKGAQLLKCRRRGNPKFCPFKLSMDEKYLIWYSGEEERQLRLS 66
Query: 66 HVSRIIPGQRTPIFQRYPRPEKEYQSFSLIY--NDRSLDLICKDKDEAEVWFTGLKALIS 123
V I+ GQ TP FQ+ + +++ QSFSLIY + +LDLICKDK +A+ WF GL+A+I+
Sbjct: 67 SVITIVRGQITPNFQKQAQSDRKEQSFSLIYANGEHTLDLICKDKAQADSWFKGLRAVIT 126
Query: 124 RSHYRKGRAESRSDE-VSSVATSPRAHTQR 152
+ H + RS S SP +R
Sbjct: 127 KHHNIRNSVNHRSSRGAQSCINSPAGFMRR 156
Score = 279 (103.3 bits), Expect = 5.9e-73, Sum P(3) = 5.9e-73
Identities = 102/359 (28%), Positives = 158/359 (44%)
Query: 325 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 384
++ WG G G +D PKL+++ +V+ ++ G H VT G+++ WG
Sbjct: 260 DIMIWGAITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWG-- 317
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG-DGTFGV 443
N N G LG + + PK++ LE + V SV+C T VT +G+L+ +G DG G
Sbjct: 318 NGNSGKLGLKVNIDIDHPKRVES-LEDVAVRSVACSDHQTCAVTESGELYLWGIDG--GT 374
Query: 444 LGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXX 502
+ T + D L G TV + ACG WHTA V G+LFT+
Sbjct: 375 IEQSGS-QFLTRKISDVLGGSLTVLSVACGAWHTAIVTS------------SGQLFTYGS 421
Query: 503 XXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT------------GHVY 550
E+ P V +L VSCG T A+ T G ++
Sbjct: 422 GTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLF 481
Query: 551 TMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACG-DYHVAVLTSRTEVYTWGKGA 608
T G G+LG + KL PT V + +F++ ++CG VA+ S T VYT G
Sbjct: 482 TWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIK-VSCGWTLTVALSISGT-VYTMGSSI 539
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSG 663
+G+LG D++ ++ L + VK I G+ A + ++ W G++ + G
Sbjct: 540 HGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLG 598
Score = 252 (93.8 bits), Expect = 3.0e-179, Sum P(3) = 3.0e-179
Identities = 68/216 (31%), Positives = 113/216 (52%)
Query: 863 KRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLT 922
K +EE+ +L+A ++ L R+ +L ++E ++L + VA EE K +AAK++IK+L
Sbjct: 796 KILTEEIERLKAVIKNLQRQCELGNEKMEECQQELDKTWEVAKEEAEKSKAAKEIIKALA 855
Query: 923 AQLKDMAEMLPVGAVRNSNSFHSSP-TPAWDVSSAAIEQPSSPLTFQGAIPXXXXXXXXX 981
++L+ E P ++ + + S +P +D S +I + T +
Sbjct: 856 SKLQANKEK-PSNPLKTGIACNPSQVSPIFD-DSMSIPYLTPITTARSQHETKQHVEKCV 913
Query: 982 XXXDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLK 1041
D+ +AS A T+ + + + ++ VEQ E GVYIT ALP G K
Sbjct: 914 TKSSNRDSNIKLLVDAS--PAITRTGYLQNETQDSSAEQ-VEQYEPGVYITFTALPCGQK 970
Query: 1042 DLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSM 1077
LKRVRFSRK+FSEK+A++WW + VY +Y+ +
Sbjct: 971 TLKRVRFSRKRFSEKEAQRWWEEKQVLVYNKYDAEI 1006
Score = 52 (23.4 bits), Expect = 3.7e-158, Sum P(3) = 3.7e-158
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 854 SPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEAL--AVAGEETAKC 911
S KI+ ++ +R + L+ Q E K + + EL++T KE + A +E K
Sbjct: 794 SNKILTEEIERLKAVIKNLQRQCELGNEKMEECQQELDKTWEVAKEEAEKSKAAKEIIKA 853
Query: 912 RAAK 915
A+K
Sbjct: 854 LASK 857
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 476 (172.6 bits), Expect = 9.8e-46, Sum P(2) = 9.8e-46
Identities = 123/362 (33%), Positives = 177/362 (48%)
Query: 271 TGDGILGGGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG-EVFS 328
+GD + G G G D P + + + ++ CG H ++ G EV+S
Sbjct: 32 SGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYS 91
Query: 329 WGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF 388
WG GRLGHG SD+ P I AL I ++ +ACG+ H AVT+ G++ +WG N N
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWG-RNQN- 149
Query: 389 GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 448
G LG G+ +P+K+ EGI + V+ G HTA VT G L+ +G G +G LG GD
Sbjct: 150 GQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGD 208
Query: 449 RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXX 508
R P V S G + ACG HT +V G L+T+
Sbjct: 209 RTDRLVPERVTSTGGEKMSMVACGWRHTISV------------SYSGALYTYGWSKYGQL 256
Query: 509 XXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANG 567
E L+P + AL Q+S G T+ALT+ G +Y G +GQ+G +
Sbjct: 257 GHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQ 316
Query: 568 KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 627
P +V + V+ ++CG H +T R V+ WG+G NG+LG G++ DRNFP ++E
Sbjct: 317 CSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIE 375
Query: 628 AL 629
AL
Sbjct: 376 AL 377
Score = 436 (158.5 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 114/369 (30%), Positives = 172/369 (46%)
Query: 310 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 369
I+ G H+ + V SWG G+LGHG D P + AL + V CG HT
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 370 CAVTLSG-DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 428
A + SG ++Y+WG + FG LGHGN L+ P + L GI + ++CG H VT
Sbjct: 80 VAYSQSGMEVYSWGWGD--FGRLGHGNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVT 136
Query: 429 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
G++ ++G G LG GD P+++ + +G+R A G HTAAV E
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 189
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 548
G L+ W + RLVP V + V+CG T++++ +G
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244
Query: 549 VYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 607
+YT G YGQLG L P ++E L+ +F+ +I+ G H LTS ++Y WG
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWN 303
Query: 608 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSG 663
G++G G+ D+ P V D++V + CG T A+ + W G + + G
Sbjct: 304 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 363
Query: 664 CRIPFNFKR 672
+ NF +
Sbjct: 364 ESVDRNFPK 372
Score = 345 (126.5 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 98/300 (32%), Positives = 140/300 (46%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
V+ WG GD G LG H + S D F P +++ + ++ IACG H VT
Sbjct: 89 VYSWG--WGDFGRLG---HGNSS------DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137
Query: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
+GEV SWG G+LG G D P+ I A + I +++VA G HT AVT GD+Y WG
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWG 197
Query: 383 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 442
+G LG G+ +P+++ G +S V+CG HT V+ +G L+T+G +G
Sbjct: 198 WGR--YGNLGLGDRTDRLVPERVTST-GGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVW-HTAAVVEVMVGXXXXXXXXXGKLFTWX 501
LGHGD P ++++L + G W HT A+ GKL+ W
Sbjct: 255 QLGHGDLEDHLIPHKLEALSN-SFISQISGGWRHTMALTS------------DGKLYGWG 301
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
+ P V + QVSCG T+A+T +V+ G GQLG
Sbjct: 302 WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361
Score = 307 (113.1 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 90/293 (30%), Positives = 140/293 (47%)
Query: 359 VELVACGEHHTCAVTLSGDMY-TWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS 416
V +++ G H+ A+ LSGD+ +WG G + G LGHG+ P +L+ L+G + S
Sbjct: 17 VLIISAGASHSVAL-LSGDIVCSWGRGED---GQLGHGDAEDRPSPTQLSA-LDGHQIVS 71
Query: 417 VSCGPWHTAVVTSAG-QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 475
V+CG HT + +G +++++G G FG LGHG+ + TP + +L G+R + ACG H
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSH 131
Query: 476 TAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSC 535
AV G++ +W E LVP + A V+
Sbjct: 132 CLAVT------------MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 179
Query: 536 GHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAV 594
G T A+T G +Y G YG LG + + +P RV + + +ACG H
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK-MSMVACGWRHTIS 238
Query: 595 LTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
++ +YT+G G+LGHGD +D P +EAL + + I G T A+
Sbjct: 239 VSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMAL 291
Score = 40 (19.1 bits), Expect = 9.8e-46, Sum P(2) = 9.8e-46
Identities = 9/39 (23%), Positives = 14/39 (35%)
Query: 988 DNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDE 1026
D P EA + + + +P+ G WV E
Sbjct: 367 DRNFPKIIEALSVDGASGQHIESSNIDPSSGKSWVSPAE 405
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 461 (167.3 bits), Expect = 4.7e-39, P = 4.7e-39
Identities = 136/435 (31%), Positives = 208/435 (47%)
Query: 279 GIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
G++ G+K VP E+ L+V +A G + VT +G+V++ GE GRL
Sbjct: 2969 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3028
Query: 338 GHGVDSD-VSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G G+ S V P+ I AL N V+ VA G H A+T+ G +++WG + G LGH
Sbjct: 3029 GLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD--GKLGHF 3086
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+ M+ P+ + L+ + ++CG H+A +TS+G+L+T+G G +G LGHGD +
Sbjct: 3087 SRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLK 3145
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKE 514
P+ V L G R ++ ACG A + + G +F+W E
Sbjct: 3146 PKMVKVLLGHRVIQVACGS-RDAQTLAL---------TDEGLVFSWGDGDFGKLGRGGSE 3195
Query: 515 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRV 573
+P + L CQ+ CG ++ALT +G V+T G Y +LG + + P V
Sbjct: 3196 GCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVV 3255
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 633
EG K V +A G H +T +VY WG +G+ G+G T P+LV+ L+ ++
Sbjct: 3256 EGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3314
Query: 634 VKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGL-VYCHTCSSKK 692
+ + CG+S + A W + VD + S P F+ R L V SS
Sbjct: 3315 ITRVACGSSHSVA-----WTT-VDVATPS-VHEPVLFQTARDPLGASYLGVPSDADSSAA 3367
Query: 693 SVKASMAPNPNKPYR 707
S K S A N +KP R
Sbjct: 3368 SNKISGA-NSSKPNR 3381
Score = 455 (165.2 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 120/382 (31%), Positives = 183/382 (47%)
Query: 272 GDG-ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSW 329
G G I G G + G G++ VP E+ L + G + VT G++++
Sbjct: 3955 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 330 GEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCN 387
G GGRLG G VS P L+++++++ ++ VA G H A++ G++Y+WG
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAE 4072
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G LGHGN P+ + L GI V ++ G H+A +T+AG LFT+G G +G LGHG
Sbjct: 4073 DGKLGHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHG 4131
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
D P+ V++L+G R + ACG + +++W
Sbjct: 4132 DSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC----------LTDDDTVWSWGDGDYGK 4181
Query: 508 XXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG 567
+ VP + +L + +V CG +VALT +G VYT G Y +LG +
Sbjct: 4182 LGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4241
Query: 568 -KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT--EVYTWGKGANGRLGHGDTDDRNFPS 624
+ P +V+G K + IA G H T EVYTWG G+LG G T+ P
Sbjct: 4242 VRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPR 4300
Query: 625 LVEALKDKQVKSIVCGTSFTAA 646
LV AL+ K++ + CG++ T A
Sbjct: 4301 LVAALQGKKINRVACGSAHTLA 4322
Score = 380 (138.8 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 109/337 (32%), Positives = 159/337 (47%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ GE T +G LG GI SG+ V + + A+ + VV V + GGRHA +T
Sbjct: 3017 VYACGEAT-NGRLGLGIS-SGT---VPIPRQIT-ALSNYVVKKVA-VHSGGRHAMALTVD 3069
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G++FSWGE G+LGH + P+LI+ALK + +ACG H+ A+T SG++YTWG
Sbjct: 3070 GKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGL 3129
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTF 441
+G LGHG+ + PK + L G V V+CG T +T G +F++GDG F
Sbjct: 3130 GE--YGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
G LG G + P+ ++ L G + CG + A+ + G ++TW
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWTWG 3234
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
P V L V+ G +A+T TG VY G +GQ G
Sbjct: 3235 KGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294
Query: 562 DPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+ + PT V+G L + +ACG H T+
Sbjct: 3295 NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3330
Score = 364 (133.2 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 100/337 (29%), Positives = 153/337 (45%)
Query: 271 TGDGILGGGIHRSGSYAGVKMDSFV--PKAVESAVVLDVQNIAC--GGRHAALVTKQGEV 326
T DG L + +G G+ V P +ES + ++ +A GG+H ++ +GEV
Sbjct: 4006 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065
Query: 327 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
+SWGE G+LGHG S P++I++L+ I V +A G H+ +T +GD++TWG
Sbjct: 4066 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGR- 4124
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTFGVL 444
+G LGHG+ PK + L+G V ++CG T +T ++++GDG +G L
Sbjct: 4125 -YGRLGHGDSEDQLKPKLVEA-LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4182
Query: 445 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXX 504
G G P ++DSL L V+ CG + A+ + G ++TW
Sbjct: 4183 GRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTK------------SGAVYTWGKGD 4230
Query: 505 XXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG--HVYTMGSPVYGQLGD 562
+ P V L ++ G V T G VYT G GQLGD
Sbjct: 4231 YHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGD 4290
Query: 563 PKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSR 598
N R+ L + +ACG H +A TS+
Sbjct: 4291 GTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSK 4327
Score = 363 (132.8 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 101/338 (29%), Positives = 166/338 (49%)
Query: 342 DSDVSHPKLIDALKNINVELVACGE--HHTCAVTLSGDMYTWGGSNC-NFGLLGHGNEMS 398
+SD P+L+ +L + N+ +A HH A++ +G++++WG C + G LGHG+ +
Sbjct: 479 NSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWG---CGDGGRLGHGDTVP 535
Query: 399 LWLPK---KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 455
L PK L+G G HV ++CG ++A +T+ G+L+T+G G +G LGHG + P
Sbjct: 536 LEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595
Query: 456 REVDSLKGLRTVRAACGVW--HTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXK 513
V LKGL+ + +CG T AV E G++++W
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTE------------NGQVWSWGDGDYGKLGRGGS 643
Query: 514 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTR 572
+ P + L + + +V CG ++ALT G VYT G +LG + + + P
Sbjct: 644 DGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKL 703
Query: 573 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT--DDRNFPSLVEALK 630
+EG K ++ +A G H LT +EV++WG +N + H DT + P+ + L
Sbjct: 704 LEGLKGKKVID-VAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRITKPEPAALPGLD 760
Query: 631 DKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPF 668
K + I CG + + A W S + S+ G R+PF
Sbjct: 761 TKHIVGIACGPAQSFA-----WSSCSEWSI--GLRVPF 791
Score = 356 (130.4 bits), Expect = 9.1e-28, P = 9.1e-28
Identities = 99/306 (32%), Positives = 146/306 (47%)
Query: 292 DSFVPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 349
D+ P+ V+S ++ IA G H ++ GEVFSWG GGRLGHG + PK
Sbjct: 481 DTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPK 540
Query: 350 LIDALKNI----NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 405
LI AL +V +ACG ++ A+T G++YTWG N +G LGHG+ +P +
Sbjct: 541 LISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN--YGRLGHGSSEDQTIPMLV 598
Query: 406 NGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 463
G L+G+ V VSCG T VT GQ++++GDG +G LG G TP+ ++ L+
Sbjct: 599 TG-LKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657
Query: 464 LRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVA 523
L V+ CG + A+ + G+++TW +E P +
Sbjct: 658 LDIVKVRCGSQFSIALTK------------DGQVYTWGKGDNQRLGHGTEEHVRYPKLLE 705
Query: 524 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP-KANGKLPTRVEGKLTKNFV 582
L V+ G + +ALT V++ GS Q D + P + G TK+ V
Sbjct: 706 GLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKHIV 765
Query: 583 EEIACG 588
IACG
Sbjct: 766 G-IACG 770
Score = 352 (129.0 bits), Expect = 2.5e-27, P = 2.5e-27
Identities = 91/283 (32%), Positives = 137/283 (48%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WGE DG LG G +RS D P+ +ES ++V +IA GG H+A +T
Sbjct: 4065 VYSWGEAE-DGKLGHG-NRS------PCDR--PRVIESLRGIEVVDIAAGGAHSACITAA 4114
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G++F+WG+ GRLGHG D PKL++AL+ V +ACG + L+ D W
Sbjct: 4115 GDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSW 4174
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 443
+ ++G LG G +P K++ L + V V CG + +T +G ++T+G G +
Sbjct: 4175 GDGDYGKLGRGGSDGCKVPMKIDS-LTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4233
Query: 444 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXX 503
LGHG V PR+V L+G + + A G H E G+++TW
Sbjct: 4234 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE----------DGLGEVYTWGDN 4283
Query: 504 XXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
A P VAAL +V+CG + T+A +T+
Sbjct: 4284 DEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4326
Score = 347 (127.2 bits), Expect = 8.4e-27, P = 8.4e-27
Identities = 109/348 (31%), Positives = 164/348 (47%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V+ A G AA + + +VF WG +LG S + P + L +NV VA G
Sbjct: 2948 VRKKAAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3005
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 423
AVT+ G +Y G + N G LG G + ++ +P+++ L V V+ G H
Sbjct: 3006 KSLFAVTVEGKVYACGEAT-N-GRLGLGISSGTVPIPRQITA-LSNYVVKKVAVHSGGRH 3062
Query: 424 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 483
+T G++F++G+G G LGH R++ PR +++LK R ACG H+AA+
Sbjct: 3063 AMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS-- 3120
Query: 484 VGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGH--SLTV 541
G+L+TW +L P V L+ QV+CG + T+
Sbjct: 3121 ----------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3170
Query: 542 ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 600
ALT G V++ G +G+LG + G +P +E +L V +I CG LT
Sbjct: 3171 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3229
Query: 601 VYTWGKGANGRLGHG-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
V+TWGKG RLGHG D R P +VE L+ K++ + G A+
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRK-PQVVEGLRGKKIVHVAVGALHCLAV 3276
Score = 300 (110.7 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 73/220 (33%), Positives = 110/220 (50%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG C G LG H G ++ + V +IACG ++A +T +
Sbjct: 517 VFSWG-CGDGGRLG---H--GDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMYTW 381
GE+++WG GRLGHG D + P L+ LK + V V+CG + T AVT +G +++W
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSW 630
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G + +G LG G PK + L+ + + V CG + +T GQ++T+G G
Sbjct: 631 GDGD--YGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDN 687
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
LGHG V P+ ++ LKG + + A G H A+ E
Sbjct: 688 QRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727
Score = 265 (98.3 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 79/265 (29%), Positives = 116/265 (43%)
Query: 222 GSDGRTGHLKGLSGDTFRVXXXXXXXXXXXXXXXXXXXXXXXVFIWGECTGDGILGGGIH 281
G DG+ GH ++ D R+ + GE G+ G
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA--ITSSGELYTWGL--GEYG 3133
Query: 282 RSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELGGRLGH 339
R G G PK V+ + V +ACG R A + T +G VFSWG+ G+LG
Sbjct: 3134 RLGH--GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3191
Query: 340 GVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL 399
G + P+ I+ L V + CG + A+T SG ++TWG + + LGHG ++ +
Sbjct: 3192 GGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHGTDVHV 3249
Query: 400 WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD 459
P+ + G L G + V+ G H VT GQ++ +GD G G+G P V
Sbjct: 3250 RKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308
Query: 460 SLKGLRTVRAACGVWHTAAVVEVMV 484
L+G + R ACG H+ A V V
Sbjct: 3309 GLEGQKITRVACGSSHSVAWTTVDV 3333
Score = 246 (91.7 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 62/194 (31%), Positives = 101/194 (52%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
P E L V IAC + ++++ G V++ +SD P+L+ +L
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYT----------QAYNSDTLGPQLVQSLA 492
Query: 356 NINVELVACGE--HHTCAVTLSGDMYTWGGSNC-NFGLLGHGNEMSLWLPK---KLNGPL 409
+ N+ +A HH A++ +G++++WG C + G LGHG+ + L PK L+G
Sbjct: 493 SRNIVKIAAHSDGHHYLALSANGEVFSWG---CGDGGRLGHGDTVPLEEPKLISALSGKQ 549
Query: 410 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 469
G HV ++CG ++A +T+ G+L+T+G G +G LGHG + P V LKGL+ +
Sbjct: 550 AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDV 609
Query: 470 ACGVW--HTAAVVE 481
+CG T AV E
Sbjct: 610 SCGSGDAQTLAVTE 623
Score = 219 (82.2 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 84/287 (29%), Positives = 125/287 (43%)
Query: 422 WHTAVVTSAGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
W T +G ++ +G G LG G ++ V TP E +L LR V+ G AV
Sbjct: 3949 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCE--ALATLRPVQLIGGEQTLFAV 4005
Query: 480 VEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAAL--VEPNFCQVSCGH 537
GKL+ E+ PT + ++ V V+ G
Sbjct: 4006 T------------ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4053
Query: 538 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+AL++ G VY+ G G+LG + RV L V +IA G H A +T+
Sbjct: 4054 KHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA 4113
Query: 598 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH------K 651
+++TWGKG GRLGHGD++D+ P LVEAL+ +V I CG+ +CL
Sbjct: 4114 AGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWS 4173
Query: 652 WVSG----VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 694
W G + + GC++P K + + G+V C S+ SV
Sbjct: 4174 WGDGDYGKLGRGGSDGCKVPM----KIDSLTDLGVVKVE-CGSQFSV 4215
Score = 218 (81.8 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 74/291 (25%), Positives = 126/291 (43%)
Query: 375 SGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 432
SG +Y WG ++ G LG G ++ + P + L + + G VT+ G+
Sbjct: 3956 SGTIYGWGHNHR--GQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4010
Query: 433 LFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGXXXXX 490
L+ G G G LG G SVSTP ++S++ ++ V G H A+
Sbjct: 4011 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL----------- 4059
Query: 491 XXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 550
G++++W + P + +L ++ G + + +T G ++
Sbjct: 4060 -SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLF 4118
Query: 551 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGA 608
T G YG+LG + +L ++ L V +IACG D LT V++WG G
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 655
G+LG G +D P +++L D V + CG+ F+ A+ ++ W G
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKG 4229
Score = 217 (81.4 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 55/161 (34%), Positives = 86/161 (53%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
V+ WG+ GD G LG R GS G K PK +E LD+ + CG + + +TK
Sbjct: 627 VWSWGD--GDYGKLG----RGGS-DGCK----TPKLIEKLQDLDIVKVRCGSQFSIALTK 675
Query: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G+V++WG+ RLGHG + V +PKL++ LK V VA G H A+T ++++WG
Sbjct: 676 DGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 383 GSN-CNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 421
++ C H + + + P+ P L+ H+ ++CGP
Sbjct: 736 SNDQCQ-----HFDTLRITKPEPAALPGLDTKHIVGIACGP 771
Score = 199 (75.1 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 54/188 (28%), Positives = 86/188 (45%)
Query: 475 HTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVS 534
+T ++V K+F W VP+ L N QV+
Sbjct: 2943 NTGSLVRKKAAGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 3002
Query: 535 CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFV-EEIAC--GDYH 591
G A+T G VY G G+LG ++G +P + N+V +++A G H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC--- 648
LT ++++WG+G +G+LGH + + P L+EALK K+++ I CG+S +AAI
Sbjct: 3063 AMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSG 3122
Query: 649 -LHKWVSG 655
L+ W G
Sbjct: 3123 ELYTWGLG 3130
Score = 162 (62.1 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 46/133 (34%), Positives = 65/133 (48%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGD-Y 590
Q++C + L+ G VYT Y D P V+ ++N V+ A D +
Sbjct: 456 QIACAEKRFLILSRNGRVYTQA---YNS--DTLG----PQLVQSLASRNIVKIAAHSDGH 506
Query: 591 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ----VKSIVCGTSFTAA 646
H L++ EV++WG G GRLGHGDT P L+ AL KQ V I CG++++AA
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAA 566
Query: 647 IC----LHKWVSG 655
I L+ W G
Sbjct: 567 ITAEGELYTWGRG 579
Score = 130 (50.8 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 44/159 (27%), Positives = 77/159 (48%)
Query: 325 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 384
EV +WG +G ++VS P + L N+ V +AC E ++ +G +YT
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQA-- 477
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 444
N LG SL + + + +++ S G H +++ G++F++G G G L
Sbjct: 478 -YNSDTLGPQLVQSL-ASRNI------VKIAAHSDGH-HYLALSANGEVFSWGCGDGGRL 528
Query: 445 GHGDRISVSTPREVDSLKGLRT----VRAACGVWHTAAV 479
GHGD + + P+ + +L G + V ACG ++AA+
Sbjct: 529 GHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAI 567
Score = 57 (25.1 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 25/91 (27%), Positives = 38/91 (41%)
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
G+++TW A P VAAL +V+CG + T+A +T+
Sbjct: 4275 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS-------- 4326
Query: 555 PVYGQLGDPKANGKLPTRVEGKLTKNFVEEI 585
P GKLPT+V + N ++EI
Sbjct: 4327 -------KPANAGKLPTQVP--MEYNHLQEI 4348
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 461 (167.3 bits), Expect = 4.7e-39, P = 4.7e-39
Identities = 136/435 (31%), Positives = 208/435 (47%)
Query: 279 GIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
G++ G+K VP E+ L+V +A G + VT +G+V++ GE GRL
Sbjct: 2969 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3028
Query: 338 GHGVDSD-VSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G G+ S V P+ I AL N V+ VA G H A+T+ G +++WG + G LGH
Sbjct: 3029 GLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD--GKLGHF 3086
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+ M+ P+ + L+ + ++CG H+A +TS+G+L+T+G G +G LGHGD +
Sbjct: 3087 SRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLK 3145
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKE 514
P+ V L G R ++ ACG A + + G +F+W E
Sbjct: 3146 PKMVKVLLGHRVIQVACGS-RDAQTLAL---------TDEGLVFSWGDGDFGKLGRGGSE 3195
Query: 515 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRV 573
+P + L CQ+ CG ++ALT +G V+T G Y +LG + + P V
Sbjct: 3196 GCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVV 3255
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 633
EG K V +A G H +T +VY WG +G+ G+G T P+LV+ L+ ++
Sbjct: 3256 EGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3314
Query: 634 VKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGL-VYCHTCSSKK 692
+ + CG+S + A W + VD + S P F+ R L V SS
Sbjct: 3315 ITRVACGSSHSVA-----WTT-VDVATPS-VHEPVLFQTARDPLGASYLGVPSDADSSAA 3367
Query: 693 SVKASMAPNPNKPYR 707
S K S A N +KP R
Sbjct: 3368 SNKISGA-NSSKPNR 3381
Score = 455 (165.2 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 120/382 (31%), Positives = 183/382 (47%)
Query: 272 GDG-ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSW 329
G G I G G + G G++ VP E+ L + G + VT G++++
Sbjct: 3955 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 330 GEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCN 387
G GGRLG G VS P L+++++++ ++ VA G H A++ G++Y+WG
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAE 4072
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G LGHGN P+ + L GI V ++ G H+A +T+AG LFT+G G +G LGHG
Sbjct: 4073 DGKLGHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHG 4131
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
D P+ V++L+G R + ACG + +++W
Sbjct: 4132 DSEDQLKPKLVEALQGYRVIDIACGSGDAQTLC----------LTDDDTVWSWGDGDYGK 4181
Query: 508 XXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG 567
+ VP + +L + +V CG +VALT +G VYT G Y +LG +
Sbjct: 4182 LGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4241
Query: 568 -KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT--EVYTWGKGANGRLGHGDTDDRNFPS 624
+ P +V+G K + IA G H T EVYTWG G+LG G T+ P
Sbjct: 4242 VRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPR 4300
Query: 625 LVEALKDKQVKSIVCGTSFTAA 646
LV AL+ K++ + CG++ T A
Sbjct: 4301 LVAALQGKKINRVACGSAHTLA 4322
Score = 380 (138.8 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 109/337 (32%), Positives = 159/337 (47%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ GE T +G LG GI SG+ V + + A+ + VV V + GGRHA +T
Sbjct: 3017 VYACGEAT-NGRLGLGIS-SGT---VPIPRQIT-ALSNYVVKKVA-VHSGGRHAMALTVD 3069
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G++FSWGE G+LGH + P+LI+ALK + +ACG H+ A+T SG++YTWG
Sbjct: 3070 GKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGL 3129
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTF 441
+G LGHG+ + PK + L G V V+CG T +T G +F++GDG F
Sbjct: 3130 GE--YGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
G LG G + P+ ++ L G + CG + A+ + G ++TW
Sbjct: 3187 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWTWG 3234
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
P V L V+ G +A+T TG VY G +GQ G
Sbjct: 3235 KGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294
Query: 562 DPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+ + PT V+G L + +ACG H T+
Sbjct: 3295 NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3330
Score = 364 (133.2 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 100/337 (29%), Positives = 153/337 (45%)
Query: 271 TGDGILGGGIHRSGSYAGVKMDSFV--PKAVESAVVLDVQNIAC--GGRHAALVTKQGEV 326
T DG L + +G G+ V P +ES + ++ +A GG+H ++ +GEV
Sbjct: 4006 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065
Query: 327 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
+SWGE G+LGHG S P++I++L+ I V +A G H+ +T +GD++TWG
Sbjct: 4066 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGR- 4124
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTFGVL 444
+G LGHG+ PK + L+G V ++CG T +T ++++GDG +G L
Sbjct: 4125 -YGRLGHGDSEDQLKPKLVEA-LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKL 4182
Query: 445 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXX 504
G G P ++DSL L V+ CG + A+ + G ++TW
Sbjct: 4183 GRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTK------------SGAVYTWGKGD 4230
Query: 505 XXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG--HVYTMGSPVYGQLGD 562
+ P V L ++ G V T G VYT G GQLGD
Sbjct: 4231 YHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGD 4290
Query: 563 PKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSR 598
N R+ L + +ACG H +A TS+
Sbjct: 4291 GTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSK 4327
Score = 363 (132.8 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 101/338 (29%), Positives = 166/338 (49%)
Query: 342 DSDVSHPKLIDALKNINVELVACGE--HHTCAVTLSGDMYTWGGSNC-NFGLLGHGNEMS 398
+SD P+L+ +L + N+ +A HH A++ +G++++WG C + G LGHG+ +
Sbjct: 479 NSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWG---CGDGGRLGHGDTVP 535
Query: 399 LWLPK---KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 455
L PK L+G G HV ++CG ++A +T+ G+L+T+G G +G LGHG + P
Sbjct: 536 LEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595
Query: 456 REVDSLKGLRTVRAACGVW--HTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXK 513
V LKGL+ + +CG T AV E G++++W
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTE------------NGQVWSWGDGDYGKLGRGGS 643
Query: 514 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTR 572
+ P + L + + +V CG ++ALT G VYT G +LG + + + P
Sbjct: 644 DGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKL 703
Query: 573 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT--DDRNFPSLVEALK 630
+EG K ++ +A G H LT +EV++WG +N + H DT + P+ + L
Sbjct: 704 LEGLKGKKVID-VAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRITKPEPAALPGLD 760
Query: 631 DKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPF 668
K + I CG + + A W S + S+ G R+PF
Sbjct: 761 TKHIVGIACGPAQSFA-----WSSCSEWSI--GLRVPF 791
Score = 356 (130.4 bits), Expect = 9.1e-28, P = 9.1e-28
Identities = 99/306 (32%), Positives = 146/306 (47%)
Query: 292 DSFVPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 349
D+ P+ V+S ++ IA G H ++ GEVFSWG GGRLGHG + PK
Sbjct: 481 DTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPK 540
Query: 350 LIDALKNI----NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 405
LI AL +V +ACG ++ A+T G++YTWG N +G LGHG+ +P +
Sbjct: 541 LISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN--YGRLGHGSSEDQTIPMLV 598
Query: 406 NGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 463
G L+G+ V VSCG T VT GQ++++GDG +G LG G TP+ ++ L+
Sbjct: 599 TG-LKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657
Query: 464 LRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVA 523
L V+ CG + A+ + G+++TW +E P +
Sbjct: 658 LDIVKVRCGSQFSIALTK------------DGQVYTWGKGDNQRLGHGTEEHVRYPKLLE 705
Query: 524 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP-KANGKLPTRVEGKLTKNFV 582
L V+ G + +ALT V++ GS Q D + P + G TK+ V
Sbjct: 706 GLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKHIV 765
Query: 583 EEIACG 588
IACG
Sbjct: 766 G-IACG 770
Score = 352 (129.0 bits), Expect = 2.5e-27, P = 2.5e-27
Identities = 91/283 (32%), Positives = 137/283 (48%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WGE DG LG G +RS D P+ +ES ++V +IA GG H+A +T
Sbjct: 4065 VYSWGEAE-DGKLGHG-NRS------PCDR--PRVIESLRGIEVVDIAAGGAHSACITAA 4114
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G++F+WG+ GRLGHG D PKL++AL+ V +ACG + L+ D W
Sbjct: 4115 GDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSW 4174
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 443
+ ++G LG G +P K++ L + V V CG + +T +G ++T+G G +
Sbjct: 4175 GDGDYGKLGRGGSDGCKVPMKIDS-LTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4233
Query: 444 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXX 503
LGHG V PR+V L+G + + A G H E G+++TW
Sbjct: 4234 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE----------DGLGEVYTWGDN 4283
Query: 504 XXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
A P VAAL +V+CG + T+A +T+
Sbjct: 4284 DEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4326
Score = 347 (127.2 bits), Expect = 8.4e-27, P = 8.4e-27
Identities = 109/348 (31%), Positives = 164/348 (47%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V+ A G AA + + +VF WG +LG S + P + L +NV VA G
Sbjct: 2948 VRKKAAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3005
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 423
AVT+ G +Y G + N G LG G + ++ +P+++ L V V+ G H
Sbjct: 3006 KSLFAVTVEGKVYACGEAT-N-GRLGLGISSGTVPIPRQITA-LSNYVVKKVAVHSGGRH 3062
Query: 424 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 483
+T G++F++G+G G LGH R++ PR +++LK R ACG H+AA+
Sbjct: 3063 AMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS-- 3120
Query: 484 VGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGH--SLTV 541
G+L+TW +L P V L+ QV+CG + T+
Sbjct: 3121 ----------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3170
Query: 542 ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 600
ALT G V++ G +G+LG + G +P +E +L V +I CG LT
Sbjct: 3171 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3229
Query: 601 VYTWGKGANGRLGHG-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
V+TWGKG RLGHG D R P +VE L+ K++ + G A+
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRK-PQVVEGLRGKKIVHVAVGALHCLAV 3276
Score = 300 (110.7 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 73/220 (33%), Positives = 110/220 (50%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG C G LG H G ++ + V +IACG ++A +T +
Sbjct: 517 VFSWG-CGDGGRLG---H--GDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAE 570
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMYTW 381
GE+++WG GRLGHG D + P L+ LK + V V+CG + T AVT +G +++W
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSW 630
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G + +G LG G PK + L+ + + V CG + +T GQ++T+G G
Sbjct: 631 GDGD--YGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDN 687
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
LGHG V P+ ++ LKG + + A G H A+ E
Sbjct: 688 QRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727
Score = 265 (98.3 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 79/265 (29%), Positives = 116/265 (43%)
Query: 222 GSDGRTGHLKGLSGDTFRVXXXXXXXXXXXXXXXXXXXXXXXVFIWGECTGDGILGGGIH 281
G DG+ GH ++ D R+ + GE G+ G
Sbjct: 3078 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA--ITSSGELYTWGL--GEYG 3133
Query: 282 RSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELGGRLGH 339
R G G PK V+ + V +ACG R A + T +G VFSWG+ G+LG
Sbjct: 3134 RLGH--GDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGR 3191
Query: 340 GVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL 399
G + P+ I+ L V + CG + A+T SG ++TWG + + LGHG ++ +
Sbjct: 3192 GGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHGTDVHV 3249
Query: 400 WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD 459
P+ + G L G + V+ G H VT GQ++ +GD G G+G P V
Sbjct: 3250 RKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308
Query: 460 SLKGLRTVRAACGVWHTAAVVEVMV 484
L+G + R ACG H+ A V V
Sbjct: 3309 GLEGQKITRVACGSSHSVAWTTVDV 3333
Score = 246 (91.7 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 62/194 (31%), Positives = 101/194 (52%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
P E L V IAC + ++++ G V++ +SD P+L+ +L
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYT----------QAYNSDTLGPQLVQSLA 492
Query: 356 NINVELVACGE--HHTCAVTLSGDMYTWGGSNC-NFGLLGHGNEMSLWLPK---KLNGPL 409
+ N+ +A HH A++ +G++++WG C + G LGHG+ + L PK L+G
Sbjct: 493 SRNIVKIAAHSDGHHYLALSANGEVFSWG---CGDGGRLGHGDTVPLEEPKLISALSGKQ 549
Query: 410 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 469
G HV ++CG ++A +T+ G+L+T+G G +G LGHG + P V LKGL+ +
Sbjct: 550 AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDV 609
Query: 470 ACGVW--HTAAVVE 481
+CG T AV E
Sbjct: 610 SCGSGDAQTLAVTE 623
Score = 219 (82.2 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 84/287 (29%), Positives = 125/287 (43%)
Query: 422 WHTAVVTSAGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
W T +G ++ +G G LG G ++ V TP E +L LR V+ G AV
Sbjct: 3949 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCE--ALATLRPVQLIGGEQTLFAV 4005
Query: 480 VEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAAL--VEPNFCQVSCGH 537
GKL+ E+ PT + ++ V V+ G
Sbjct: 4006 T------------ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4053
Query: 538 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+AL++ G VY+ G G+LG + RV L V +IA G H A +T+
Sbjct: 4054 KHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA 4113
Query: 598 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH------K 651
+++TWGKG GRLGHGD++D+ P LVEAL+ +V I CG+ +CL
Sbjct: 4114 AGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWS 4173
Query: 652 WVSG----VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 694
W G + + GC++P K + + G+V C S+ SV
Sbjct: 4174 WGDGDYGKLGRGGSDGCKVPM----KIDSLTDLGVVKVE-CGSQFSV 4215
Score = 218 (81.8 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 74/291 (25%), Positives = 126/291 (43%)
Query: 375 SGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 432
SG +Y WG ++ G LG G ++ + P + L + + G VT+ G+
Sbjct: 3956 SGTIYGWGHNHR--GQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4010
Query: 433 LFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGXXXXX 490
L+ G G G LG G SVSTP ++S++ ++ V G H A+
Sbjct: 4011 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL----------- 4059
Query: 491 XXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 550
G++++W + P + +L ++ G + + +T G ++
Sbjct: 4060 -SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLF 4118
Query: 551 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGA 608
T G YG+LG + +L ++ L V +IACG D LT V++WG G
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4178
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 655
G+LG G +D P +++L D V + CG+ F+ A+ ++ W G
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKG 4229
Score = 217 (81.4 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 55/161 (34%), Positives = 86/161 (53%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
V+ WG+ GD G LG R GS G K PK +E LD+ + CG + + +TK
Sbjct: 627 VWSWGD--GDYGKLG----RGGS-DGCK----TPKLIEKLQDLDIVKVRCGSQFSIALTK 675
Query: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G+V++WG+ RLGHG + V +PKL++ LK V VA G H A+T ++++WG
Sbjct: 676 DGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 383 GSN-CNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 421
++ C H + + + P+ P L+ H+ ++CGP
Sbjct: 736 SNDQCQ-----HFDTLRITKPEPAALPGLDTKHIVGIACGP 771
Score = 199 (75.1 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 54/188 (28%), Positives = 86/188 (45%)
Query: 475 HTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVS 534
+T ++V K+F W VP+ L N QV+
Sbjct: 2943 NTGSLVRKKAAGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVA 3002
Query: 535 CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFV-EEIAC--GDYH 591
G A+T G VY G G+LG ++G +P + N+V +++A G H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC--- 648
LT ++++WG+G +G+LGH + + P L+EALK K+++ I CG+S +AAI
Sbjct: 3063 AMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSG 3122
Query: 649 -LHKWVSG 655
L+ W G
Sbjct: 3123 ELYTWGLG 3130
Score = 162 (62.1 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 46/133 (34%), Positives = 65/133 (48%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGD-Y 590
Q++C + L+ G VYT Y D P V+ ++N V+ A D +
Sbjct: 456 QIACAEKRFLILSRNGRVYTQA---YNS--DTLG----PQLVQSLASRNIVKIAAHSDGH 506
Query: 591 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ----VKSIVCGTSFTAA 646
H L++ EV++WG G GRLGHGDT P L+ AL KQ V I CG++++AA
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAA 566
Query: 647 IC----LHKWVSG 655
I L+ W G
Sbjct: 567 ITAEGELYTWGRG 579
Score = 130 (50.8 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 44/159 (27%), Positives = 77/159 (48%)
Query: 325 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 384
EV +WG +G ++VS P + L N+ V +AC E ++ +G +YT
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQA-- 477
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 444
N LG SL + + + +++ S G H +++ G++F++G G G L
Sbjct: 478 -YNSDTLGPQLVQSL-ASRNI------VKIAAHSDGH-HYLALSANGEVFSWGCGDGGRL 528
Query: 445 GHGDRISVSTPREVDSLKGLRT----VRAACGVWHTAAV 479
GHGD + + P+ + +L G + V ACG ++AA+
Sbjct: 529 GHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAI 567
Score = 57 (25.1 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 25/91 (27%), Positives = 38/91 (41%)
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
G+++TW A P VAAL +V+CG + T+A +T+
Sbjct: 4275 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS-------- 4326
Query: 555 PVYGQLGDPKANGKLPTRVEGKLTKNFVEEI 585
P GKLPT+V + N ++EI
Sbjct: 4327 -------KPANAGKLPTQVP--MEYNHLQEI 4348
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 460 (167.0 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 136/435 (31%), Positives = 208/435 (47%)
Query: 279 GIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
G++ G+K VP E+ L+V +A G + VT +G+V+S GE GRL
Sbjct: 2966 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 3025
Query: 338 GHGVDSD-VSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G G+ S V P+ I AL + V+ VA G H A+T+ G +++WG + G LGH
Sbjct: 3026 GLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD--GKLGHF 3083
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+ M+ P+ + L+ + ++CG H+A +TS+G+L+T+G G +G LGHGD +
Sbjct: 3084 SRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3142
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKE 514
P+ V L G R ++ ACG A + + G +F+W E
Sbjct: 3143 PKMVKVLLGHRVIQVACGS-RDAQTLAL---------TDEGLVFSWGDGDFGKLGRGGSE 3192
Query: 515 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRV 573
+P + L CQ+ CG ++ALT +G V+T G Y +LG + + P V
Sbjct: 3193 GCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 633
EG K V +A G H +T +VY WG +G+ G+G T P+LV+ L+ ++
Sbjct: 3253 EGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311
Query: 634 VKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGL-VYCHTCSSKK 692
+ + CG+S + A W + VD + S P F+ R L V SS
Sbjct: 3312 ITRVACGSSHSVA-----WTT-VDVATPS-VHEPVLFQTARDPLGASYLGVPSDADSSSS 3364
Query: 693 SVKASMAPN--PNKP 705
S K S A N PN+P
Sbjct: 3365 SNKISGANNCKPNRP 3379
Score = 454 (164.9 bits), Expect = 2.7e-38, P = 2.7e-38
Identities = 121/380 (31%), Positives = 181/380 (47%)
Query: 272 GDG-ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSW 329
G G I G G + G G++ VP E+ L + G + VT G++++
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 330 GEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCN 387
G GGRLG G VS P L+++++++ ++ VA G H A++ G++Y+WG
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAE 4069
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G LGHGN P+ + L GI V V+ G H+A VT+AG L+T+G G +G LGH
Sbjct: 4070 DGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4128
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
D P+ V++L+G R + ACG + +++W
Sbjct: 4129 DSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC----------LTDDDTVWSWGDGDYGK 4178
Query: 508 XXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG 567
+ VP + +L +V CG +VALT +G VYT G Y +LG +
Sbjct: 4179 LGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4238
Query: 568 -KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV 626
+ P +V+G K + IA G H T EVYTWG G+LG G T+ P LV
Sbjct: 4239 VRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4297
Query: 627 EALKDKQVKSIVCGTSFTAA 646
AL+ K+V + CG++ T A
Sbjct: 4298 AALQGKKVNRVACGSAHTLA 4317
Score = 379 (138.5 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 114/405 (28%), Positives = 189/405 (46%)
Query: 275 ILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELG 334
++G G+ YA V P E L V +AC + ++++ G V++
Sbjct: 426 VIGWGLIGWKYYANV----IGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT------ 475
Query: 335 GRLGHGVDSDVSHPKLIDALKNINVELVACGE--HHTCAVTLSGDMYTWGGSNC-NFGLL 391
+SD+ P+L+ L + N+ +A HH A+ +G++Y+WG C + G L
Sbjct: 476 ----QAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG---CGDGGRL 528
Query: 392 GHGNEMSLWLPKKLN---GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 448
GHG+ + L PK ++ G G HV ++CG ++A +T+ G+L+T+G G +G LGHG
Sbjct: 529 GHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS 588
Query: 449 RISVSTPREVDSLKGLRTVRAACGVW--HTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXX 506
+ P V LKGL+ + ACG T AV E G++++W
Sbjct: 589 SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE------------NGQVWSWGDGDYG 636
Query: 507 XXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKA 565
+ P + L + + +V CG ++ALT G VY+ G +LG +
Sbjct: 637 KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 696
Query: 566 NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT--DDRNFP 623
+ + P +EG K ++ +A G H LT +EV++WG +N + H DT + P
Sbjct: 697 HVRYPKLLEGLQGKKVID-VAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEP 753
Query: 624 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPF 668
+ + L K + I CG + + A W S + S+ G R+PF
Sbjct: 754 TALPGLDSKHIVGIACGPAQSFA-----WSSCSEWSI--GLRVPF 791
Score = 375 (137.1 bits), Expect = 8.3e-30, P = 8.3e-30
Identities = 109/337 (32%), Positives = 159/337 (47%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ GE T +G LG G+ SG+ V + + A+ S VV V + GGRHA +T
Sbjct: 3014 VYSCGEAT-NGRLGLGMS-SGT---VPIPRQIT-ALSSYVVKKVA-VHSGGRHATALTVD 3066
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G+VFSWGE G+LGH + P+LI+ALK + +ACG H+ A+T SG++YTWG
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3126
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTF 441
+G LGHG+ + PK + L G V V+CG T +T G +F++GDG F
Sbjct: 3127 GE--YGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
G LG G + P+ ++ L G + CG + A+ + G ++TW
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWTWG 3231
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
P V L V+ G +A+T +G VY G +GQ G
Sbjct: 3232 KGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291
Query: 562 DPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+ + PT V+G L + +ACG H T+
Sbjct: 3292 NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327
Score = 345 (126.5 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 90/283 (31%), Positives = 137/283 (48%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WGE DG LG G +RS D P+ +ES ++V ++A GG H+A VT
Sbjct: 4062 VYSWGEAE-DGKLGHG-NRS------PCDR--PRVIESLRGIEVVDVAAGGAHSACVTAA 4111
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G++++WG+ GRLGH D PKL++AL+ V +ACG + L+ D W
Sbjct: 4112 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSW 4171
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 443
+ ++G LG G +P K++ L G+ V V CG + +T +G ++T+G G +
Sbjct: 4172 GDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4230
Query: 444 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXX 503
LGHG V PR+V L+G + + A G H E G+++TW
Sbjct: 4231 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYTWGDN 4278
Query: 504 XXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
A P VAAL +V+CG + T+A +T+
Sbjct: 4279 DEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4321
Score = 342 (125.4 bits), Expect = 2.9e-26, P = 2.9e-26
Identities = 103/333 (30%), Positives = 157/333 (47%)
Query: 321 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 380
T + +VF WG +LG S + P + L +NV VA G AVT+ G +Y+
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016
Query: 381 WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 437
G + N G LG G + ++ +P+++ L V V+ G H +T G++F++G
Sbjct: 3017 CGEAT-N-GRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073
Query: 438 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKL 497
+G G LGH R++ PR +++LK R ACG H+AA+ G+L
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS------------SGEL 3121
Query: 498 FTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGH--SLTVALTTTGHVYTMGSP 555
+TW +L P V L+ QV+CG + T+ALT G V++ G
Sbjct: 3122 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 556 VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 614
+G+LG + G +P +E +L V +I CG LT V+TWGKG RLGH
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240
Query: 615 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
G P +VE L+ K++ + G A+
Sbjct: 3241 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Score = 294 (108.6 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 75/220 (34%), Positives = 112/220 (50%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG C G LG G V + +F K VV +IACG ++A +T +
Sbjct: 517 VYSWG-CGDGGRLGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAE 570
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMYTW 381
GE+++WG GRLGHG D + P L+ LK + V VACG + T AVT +G +++W
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G + +G LG G PK + L+ + V V CG + +T GQ++++G G
Sbjct: 631 GDGD--YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDN 687
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
LGHG V P+ ++ L+G + + A G H A+ E
Sbjct: 688 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 267 (99.0 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 79/270 (29%), Positives = 121/270 (44%)
Query: 222 GSDGRTGHLKGLSGDTFRVXXXXXXXXXXX----XXXXXXXXXXXXVFIWGECTGD-GIL 276
G DG+ GH ++ D R+ ++ WG G+ G L
Sbjct: 3075 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3132
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 334
G G + + PK V+ + V +ACG R A + T +G VFSWG+
Sbjct: 3133 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 335 GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G+LG G + P+ I+ L V + CG + A+T SG ++TWG + + LGHG
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3241
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+++ + P+ + G L G + V+ G H VT +GQ++ +GD G G+G
Sbjct: 3242 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3300
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
P V L+G + R ACG H+ A V V
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWTTVDV 3330
Score = 219 (82.2 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 75/291 (25%), Positives = 126/291 (43%)
Query: 375 SGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 432
SG +Y WG ++ G LG G ++ + P + L + + G VT+ G+
Sbjct: 3953 SGTIYGWGHNHR--GQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4007
Query: 433 LFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGXXXXX 490
L+ G G G LG G SVSTP ++S++ ++ V G H A+
Sbjct: 4008 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL----------- 4056
Query: 491 XXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 550
G++++W + P + +L V+ G + + +T G +Y
Sbjct: 4057 -SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4115
Query: 551 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGA 608
T G YG+LG + +L ++ L + V +IACG D LT V++WG G
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 655
G+LG G +D P +++L V + CG+ F+ A+ ++ W G
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226
Score = 217 (81.4 bits), Expect = 4.5e-29, Sum P(2) = 4.5e-29
Identities = 56/161 (34%), Positives = 86/161 (53%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
V+ WG+ GD G LG R GS G K PK +E LDV + CG + + +TK
Sbjct: 627 VWSWGD--GDYGKLG----RGGS-DGCK----TPKLIEKLQDLDVIKVRCGSQFSIALTK 675
Query: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G+V+SWG+ RLGHG + V +PKL++ L+ V VA G H A+T ++++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 383 GSN-CNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 421
++ C H + + + P+ P L+ H+ ++CGP
Sbjct: 736 SNDQCQ-----HFDTLRVTKPEPTALPGLDSKHIVGIACGP 771
Score = 215 (80.7 bits), Expect = 4.5e-29, Sum P(2) = 4.5e-29
Identities = 83/287 (28%), Positives = 123/287 (42%)
Query: 422 WHTAVVTSAGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
W T +G ++ +G G LG G ++ V TP E +L LR V+ G AV
Sbjct: 3946 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCE--ALATLRPVQLIGGEQTLFAV 4002
Query: 480 VEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAAL--VEPNFCQVSCGH 537
GKL+ E+ PT + ++ V V+ G
Sbjct: 4003 T------------ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4050
Query: 538 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+AL++ G VY+ G G+LG + RV L V ++A G H A +T+
Sbjct: 4051 KHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA 4110
Query: 598 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH------K 651
++YTWGKG GRLGH D++D+ P LVEAL+ +V I CG+ +CL
Sbjct: 4111 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWS 4170
Query: 652 WVSG----VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 694
W G + + GC++P K + G+V C S+ SV
Sbjct: 4171 WGDGDYGKLGRGGSDGCKVPM----KIDSLTGLGVVKVE-CGSQFSV 4212
Score = 41 (19.5 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 630 KDKQVKSIVCGTSFTAA-ICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC--YNCGLV-YC 685
KD+ S GT + + +C H+W G D S I N + +N + C + YC
Sbjct: 1360 KDEDHCSSPGGTPISKSRLCSHRWALG-DHSQAFLQAIADN-NIQDYNVKDFLCQIERYC 1417
Query: 686 HTC 688
C
Sbjct: 1418 RQC 1420
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 457 (165.9 bits), Expect = 9.0e-39, P = 9.0e-39
Identities = 135/435 (31%), Positives = 207/435 (47%)
Query: 279 GIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
G++ G+K VP E+ L+V +A G + VT +G+V+S GE GRL
Sbjct: 1774 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 1833
Query: 338 GHGVDSD-VSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G G+ S V P+ I AL + V+ VA G H A+T+ G +++WG + G LGH
Sbjct: 1834 GLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD--GKLGHF 1891
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+ M+ P+ + L+ + ++CG H+A +TS+G+L+T+G G +G LGHGD +
Sbjct: 1892 SRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 1950
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKE 514
P+ V L G R ++ ACG A + + G +F+W E
Sbjct: 1951 PKMVKVLLGHRVIQVACGS-RDAQTLAL---------TDEGLVFSWGDGDFGKLGRGGSE 2000
Query: 515 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRV 573
+P + L CQ+ CG ++ALT +G V+T G Y +LG + + P V
Sbjct: 2001 GCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 2060
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 633
EG K V +A G H +T +VY WG +G+ G+G T P+LV+ L+ ++
Sbjct: 2061 EGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 2119
Query: 634 VKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGL-VYCHTCSSKK 692
+ + CG+S + A W + VD + S P F+ R L V SS
Sbjct: 2120 ITRVACGSSHSVA-----WTT-VDVATPS-VHEPVLFQTARDPLGASYLGVPSDADSSSS 2172
Query: 693 SVKASMAPN--PNKP 705
S K S N PN+P
Sbjct: 2173 SNKISGVSNCKPNRP 2187
Score = 454 (164.9 bits), Expect = 1.9e-38, P = 1.9e-38
Identities = 121/380 (31%), Positives = 181/380 (47%)
Query: 272 GDG-ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSW 329
G G I G G + G G++ VP E+ L + G + VT G++++
Sbjct: 2724 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 2783
Query: 330 GEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCN 387
G GGRLG G VS P L+++++++ ++ VA G H A++ G++Y+WG
Sbjct: 2784 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAE 2841
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G LGHGN P+ + L GI V V+ G H+A VT+AG L+T+G G +G LGH
Sbjct: 2842 DGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 2900
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
D P+ V++L+G R + ACG + +++W
Sbjct: 2901 DSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC----------LTDDDTVWSWGDGDYGK 2950
Query: 508 XXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG 567
+ VP + +L +V CG +VALT +G VYT G Y +LG +
Sbjct: 2951 LGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 3010
Query: 568 -KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV 626
+ P +V+G K + IA G H T EVYTWG G+LG G T+ P LV
Sbjct: 3011 VRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 3069
Query: 627 EALKDKQVKSIVCGTSFTAA 646
AL+ K+V + CG++ T A
Sbjct: 3070 AALQGKKVNRVACGSAHTLA 3089
Score = 375 (137.1 bits), Expect = 6.0e-30, P = 6.0e-30
Identities = 109/337 (32%), Positives = 159/337 (47%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ GE T +G LG G+ SG+ V + + A+ S VV V + GGRHA +T
Sbjct: 1822 VYSCGEAT-NGRLGLGMS-SGT---VPIPRQIT-ALSSYVVKKVA-VHSGGRHATALTVD 1874
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G+VFSWGE G+LGH + P+LI+ALK + +ACG H+ A+T SG++YTWG
Sbjct: 1875 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 1934
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTF 441
+G LGHG+ + PK + L G V V+CG T +T G +F++GDG F
Sbjct: 1935 GE--YGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 1991
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
G LG G + P+ ++ L G + CG + A+ + G ++TW
Sbjct: 1992 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWTWG 2039
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
P V L V+ G +A+T +G VY G +GQ G
Sbjct: 2040 KGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2099
Query: 562 DPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+ + PT V+G L + +ACG H T+
Sbjct: 2100 NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 2135
Score = 345 (126.5 bits), Expect = 9.9e-27, P = 9.9e-27
Identities = 90/283 (31%), Positives = 137/283 (48%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WGE DG LG G +RS D P+ +ES ++V ++A GG H+A VT
Sbjct: 2834 VYSWGEAE-DGKLGHG-NRS------PCDR--PRVIESLRGIEVVDVAAGGAHSACVTAA 2883
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G++++WG+ GRLGH D PKL++AL+ V +ACG + L+ D W
Sbjct: 2884 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSW 2943
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 443
+ ++G LG G +P K++ L G+ V V CG + +T +G ++T+G G +
Sbjct: 2944 GDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 3002
Query: 444 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXX 503
LGHG V PR+V L+G + + A G H E G+++TW
Sbjct: 3003 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYTWGDN 3050
Query: 504 XXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
A P VAAL +V+CG + T+A +T+
Sbjct: 3051 DEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 3093
Score = 342 (125.4 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 103/333 (30%), Positives = 157/333 (47%)
Query: 321 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 380
T + +VF WG +LG S + P + L +NV VA G AVT+ G +Y+
Sbjct: 1765 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 1824
Query: 381 WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 437
G + N G LG G + ++ +P+++ L V V+ G H +T G++F++G
Sbjct: 1825 CGEAT-N-GRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 1881
Query: 438 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKL 497
+G G LGH R++ PR +++LK R ACG H+AA+ G+L
Sbjct: 1882 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS------------SGEL 1929
Query: 498 FTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGH--SLTVALTTTGHVYTMGSP 555
+TW +L P V L+ QV+CG + T+ALT G V++ G
Sbjct: 1930 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 1989
Query: 556 VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 614
+G+LG + G +P +E +L V +I CG LT V+TWGKG RLGH
Sbjct: 1990 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2048
Query: 615 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
G P +VE L+ K++ + G A+
Sbjct: 2049 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2081
Score = 267 (99.0 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 79/270 (29%), Positives = 121/270 (44%)
Query: 222 GSDGRTGHLKGLSGDTFRVXXXXXXXXXXX----XXXXXXXXXXXXVFIWGECTGD-GIL 276
G DG+ GH ++ D R+ ++ WG G+ G L
Sbjct: 1883 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 1940
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 334
G G + + PK V+ + V +ACG R A + T +G VFSWG+
Sbjct: 1941 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 1991
Query: 335 GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G+LG G + P+ I+ L V + CG + A+T SG ++TWG + + LGHG
Sbjct: 1992 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 2049
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+++ + P+ + G L G + V+ G H VT +GQ++ +GD G G+G
Sbjct: 2050 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 2108
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
P V L+G + R ACG H+ A V V
Sbjct: 2109 PTLVQGLEGQKITRVACGSSHSVAWTTVDV 2138
Score = 219 (82.2 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 75/291 (25%), Positives = 126/291 (43%)
Query: 375 SGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 432
SG +Y WG ++ G LG G ++ + P + L + + G VT+ G+
Sbjct: 2725 SGTIYGWGHNHR--GQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 2779
Query: 433 LFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGXXXXX 490
L+ G G G LG G SVSTP ++S++ ++ V G H A+
Sbjct: 2780 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL----------- 2828
Query: 491 XXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 550
G++++W + P + +L V+ G + + +T G +Y
Sbjct: 2829 -SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 2887
Query: 551 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGA 608
T G YG+LG + +L ++ L + V +IACG D LT V++WG G
Sbjct: 2888 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 2947
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 655
G+LG G +D P +++L V + CG+ F+ A+ ++ W G
Sbjct: 2948 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 2998
Score = 215 (80.7 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 83/287 (28%), Positives = 123/287 (42%)
Query: 422 WHTAVVTSAGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
W T +G ++ +G G LG G ++ V TP E +L LR V+ G AV
Sbjct: 2718 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCE--ALATLRPVQLIGGEQTLFAV 2774
Query: 480 VEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAAL--VEPNFCQVSCGH 537
GKL+ E+ PT + ++ V V+ G
Sbjct: 2775 T------------ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 2822
Query: 538 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+AL++ G VY+ G G+LG + RV L V ++A G H A +T+
Sbjct: 2823 KHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA 2882
Query: 598 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH------K 651
++YTWGKG GRLGH D++D+ P LVEAL+ +V I CG+ +CL
Sbjct: 2883 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWS 2942
Query: 652 WVSG----VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 694
W G + + GC++P K + G+V C S+ SV
Sbjct: 2943 WGDGDYGKLGRGGSDGCKVPM----KIDSLTGLGVVKVE-CGSQFSV 2984
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 457 (165.9 bits), Expect = 9.2e-39, P = 9.2e-39
Identities = 135/435 (31%), Positives = 207/435 (47%)
Query: 279 GIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
G++ G+K VP E+ L+V +A G + VT +G+V+S GE GRL
Sbjct: 1774 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 1833
Query: 338 GHGVDSD-VSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G G+ S V P+ I AL + V+ VA G H A+T+ G +++WG + G LGH
Sbjct: 1834 GLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD--GKLGHF 1891
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+ M+ P+ + L+ + ++CG H+A +TS+G+L+T+G G +G LGHGD +
Sbjct: 1892 SRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 1950
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKE 514
P+ V L G R ++ ACG A + + G +F+W E
Sbjct: 1951 PKMVKVLLGHRVIQVACGS-RDAQTLAL---------TDEGLVFSWGDGDFGKLGRGGSE 2000
Query: 515 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRV 573
+P + L CQ+ CG ++ALT +G V+T G Y +LG + + P V
Sbjct: 2001 GCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 2060
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 633
EG K V +A G H +T +VY WG +G+ G+G T P+LV+ L+ ++
Sbjct: 2061 EGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 2119
Query: 634 VKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGL-VYCHTCSSKK 692
+ + CG+S + A W + VD + S P F+ R L V SS
Sbjct: 2120 ITRVACGSSHSVA-----WTT-VDVATPS-VHEPVLFQTARDPLGASYLGVPSDADSSSS 2172
Query: 693 SVKASMAPN--PNKP 705
S K S N PN+P
Sbjct: 2173 SNKISGVSNCKPNRP 2187
Score = 454 (164.9 bits), Expect = 1.9e-38, P = 1.9e-38
Identities = 121/380 (31%), Positives = 181/380 (47%)
Query: 272 GDG-ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSW 329
G G I G G + G G++ VP E+ L + G + VT G++++
Sbjct: 2760 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 2819
Query: 330 GEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCN 387
G GGRLG G VS P L+++++++ ++ VA G H A++ G++Y+WG
Sbjct: 2820 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAE 2877
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G LGHGN P+ + L GI V V+ G H+A VT+AG L+T+G G +G LGH
Sbjct: 2878 DGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 2936
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
D P+ V++L+G R + ACG + +++W
Sbjct: 2937 DSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC----------LTDDDTVWSWGDGDYGK 2986
Query: 508 XXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG 567
+ VP + +L +V CG +VALT +G VYT G Y +LG +
Sbjct: 2987 LGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 3046
Query: 568 -KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV 626
+ P +V+G K + IA G H T EVYTWG G+LG G T+ P LV
Sbjct: 3047 VRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 3105
Query: 627 EALKDKQVKSIVCGTSFTAA 646
AL+ K+V + CG++ T A
Sbjct: 3106 AALQGKKVNRVACGSAHTLA 3125
Score = 375 (137.1 bits), Expect = 6.0e-30, P = 6.0e-30
Identities = 109/337 (32%), Positives = 159/337 (47%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ GE T +G LG G+ SG+ V + + A+ S VV V + GGRHA +T
Sbjct: 1822 VYSCGEAT-NGRLGLGMS-SGT---VPIPRQIT-ALSSYVVKKVA-VHSGGRHATALTVD 1874
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G+VFSWGE G+LGH + P+LI+ALK + +ACG H+ A+T SG++YTWG
Sbjct: 1875 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 1934
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTF 441
+G LGHG+ + PK + L G V V+CG T +T G +F++GDG F
Sbjct: 1935 GE--YGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 1991
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
G LG G + P+ ++ L G + CG + A+ + G ++TW
Sbjct: 1992 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWTWG 2039
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
P V L V+ G +A+T +G VY G +GQ G
Sbjct: 2040 KGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2099
Query: 562 DPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+ + PT V+G L + +ACG H T+
Sbjct: 2100 NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 2135
Score = 345 (126.5 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 90/283 (31%), Positives = 137/283 (48%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WGE DG LG G +RS D P+ +ES ++V ++A GG H+A VT
Sbjct: 2870 VYSWGEAE-DGKLGHG-NRS------PCDR--PRVIESLRGIEVVDVAAGGAHSACVTAA 2919
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G++++WG+ GRLGH D PKL++AL+ V +ACG + L+ D W
Sbjct: 2920 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSW 2979
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 443
+ ++G LG G +P K++ L G+ V V CG + +T +G ++T+G G +
Sbjct: 2980 GDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 3038
Query: 444 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXX 503
LGHG V PR+V L+G + + A G H E G+++TW
Sbjct: 3039 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYTWGDN 3086
Query: 504 XXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
A P VAAL +V+CG + T+A +T+
Sbjct: 3087 DEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 3129
Score = 342 (125.4 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 103/333 (30%), Positives = 157/333 (47%)
Query: 321 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 380
T + +VF WG +LG S + P + L +NV VA G AVT+ G +Y+
Sbjct: 1765 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 1824
Query: 381 WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 437
G + N G LG G + ++ +P+++ L V V+ G H +T G++F++G
Sbjct: 1825 CGEAT-N-GRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 1881
Query: 438 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKL 497
+G G LGH R++ PR +++LK R ACG H+AA+ G+L
Sbjct: 1882 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS------------SGEL 1929
Query: 498 FTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGH--SLTVALTTTGHVYTMGSP 555
+TW +L P V L+ QV+CG + T+ALT G V++ G
Sbjct: 1930 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 1989
Query: 556 VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 614
+G+LG + G +P +E +L V +I CG LT V+TWGKG RLGH
Sbjct: 1990 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2048
Query: 615 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
G P +VE L+ K++ + G A+
Sbjct: 2049 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2081
Score = 267 (99.0 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 79/270 (29%), Positives = 121/270 (44%)
Query: 222 GSDGRTGHLKGLSGDTFRVXXXXXXXXXXX----XXXXXXXXXXXXVFIWGECTGD-GIL 276
G DG+ GH ++ D R+ ++ WG G+ G L
Sbjct: 1883 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 1940
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 334
G G + + PK V+ + V +ACG R A + T +G VFSWG+
Sbjct: 1941 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 1991
Query: 335 GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G+LG G + P+ I+ L V + CG + A+T SG ++TWG + + LGHG
Sbjct: 1992 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 2049
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+++ + P+ + G L G + V+ G H VT +GQ++ +GD G G+G
Sbjct: 2050 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 2108
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
P V L+G + R ACG H+ A V V
Sbjct: 2109 PTLVQGLEGQKITRVACGSSHSVAWTTVDV 2138
Score = 219 (82.2 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 75/291 (25%), Positives = 126/291 (43%)
Query: 375 SGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 432
SG +Y WG ++ G LG G ++ + P + L + + G VT+ G+
Sbjct: 2761 SGTIYGWGHNHR--GQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 2815
Query: 433 LFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGXXXXX 490
L+ G G G LG G SVSTP ++S++ ++ V G H A+
Sbjct: 2816 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL----------- 2864
Query: 491 XXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 550
G++++W + P + +L V+ G + + +T G +Y
Sbjct: 2865 -SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 2923
Query: 551 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGA 608
T G YG+LG + +L ++ L + V +IACG D LT V++WG G
Sbjct: 2924 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 2983
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 655
G+LG G +D P +++L V + CG+ F+ A+ ++ W G
Sbjct: 2984 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3034
Score = 215 (80.7 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 83/287 (28%), Positives = 123/287 (42%)
Query: 422 WHTAVVTSAGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
W T +G ++ +G G LG G ++ V TP E +L LR V+ G AV
Sbjct: 2754 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCE--ALATLRPVQLIGGEQTLFAV 2810
Query: 480 VEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAAL--VEPNFCQVSCGH 537
GKL+ E+ PT + ++ V V+ G
Sbjct: 2811 T------------ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 2858
Query: 538 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+AL++ G VY+ G G+LG + RV L V ++A G H A +T+
Sbjct: 2859 KHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA 2918
Query: 598 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH------K 651
++YTWGKG GRLGH D++D+ P LVEAL+ +V I CG+ +CL
Sbjct: 2919 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWS 2978
Query: 652 WVSG----VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 694
W G + + GC++P K + G+V C S+ SV
Sbjct: 2979 WGDGDYGKLGRGGSDGCKVPM----KIDSLTGLGVVKVE-CGSQFSV 3020
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 458 (166.3 bits), Expect = 1.0e-38, P = 1.0e-38
Identities = 135/435 (31%), Positives = 208/435 (47%)
Query: 279 GIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
G++ G+K VP E+ L+V +A G + VT +G+V++ GE GRL
Sbjct: 2965 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3024
Query: 338 GHGVDSD-VSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G G+ S V P+ I AL + V+ VA G H A+T+ G +++WG + G LGH
Sbjct: 3025 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD--GKLGHF 3082
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+ M+ P+ + L+ + ++CG H+A +TS+G+L+T+G G +G LGHGD +
Sbjct: 3083 SRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3141
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKE 514
P+ V L G R ++ ACG A + + G +F+W E
Sbjct: 3142 PKMVKVLLGHRVIQVACGS-RDAQTLAL---------TDEGLVFSWGDGDFGKLGRGGSE 3191
Query: 515 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRV 573
+P + L CQ+ CG ++ALT +G V+T G Y +LG + + P V
Sbjct: 3192 GCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 3251
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 633
EG K V +A G H +T +VY WG +G+ G+G T P+LV+ L+ ++
Sbjct: 3252 EGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3310
Query: 634 VKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGL-VYCHTCSSKK 692
+ + CG+S + A W + VD + S P F+ R L V SS
Sbjct: 3311 ITRVACGSSHSVA-----WTT-VDVATPS-VHEPVLFQTARDPLGASYLGVPSDADSSAA 3363
Query: 693 SVKASMAPN--PNKP 705
S K S A N PN+P
Sbjct: 3364 SNKISGASNSKPNRP 3378
Score = 455 (165.2 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 122/380 (32%), Positives = 181/380 (47%)
Query: 272 GDG-ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSW 329
G G I G G + G G++ VP E+ L + G + VT G++++
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 330 GEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCN 387
G GGRLG G VS P L+++++++ ++ VA G H A++ G++Y+WG
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAE 4067
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G LGHGN P+ + L GI V V+ G H+A VT+AG L+T+G G +G LGH
Sbjct: 4068 DGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4126
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
D P+ V++L+G R V ACG + +++W
Sbjct: 4127 DSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC----------LTDDDTVWSWGDGDYGK 4176
Query: 508 XXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG 567
+ VP + +L +V CG +VALT +G VYT G Y +LG +
Sbjct: 4177 LGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4236
Query: 568 -KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV 626
+ P +V+G K + IA G H T EVYTWG G+LG G T+ P LV
Sbjct: 4237 VRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Query: 627 EALKDKQVKSIVCGTSFTAA 646
AL+ K+V + CG++ T A
Sbjct: 4296 AALQGKKVNRVACGSAHTLA 4315
Score = 379 (138.5 bits), Expect = 3.1e-30, P = 3.1e-30
Identities = 110/337 (32%), Positives = 159/337 (47%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ GE T +G LG GI SG+ V + + A+ S VV V + GGRHA +T
Sbjct: 3013 VYACGEAT-NGRLGLGIS-SGT---VPIPRQIT-ALSSYVVKKVA-VHSGGRHATALTVD 3065
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G+VFSWGE G+LGH + P+LI+ALK + +ACG H+ A+T SG++YTWG
Sbjct: 3066 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3125
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTF 441
+G LGHG+ + PK + L G V V+CG T +T G +F++GDG F
Sbjct: 3126 GE--YGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
G LG G + P+ ++ L G + CG + A+ + G ++TW
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWTWG 3230
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
P V L V+ G +A+T +G VY G +GQ G
Sbjct: 3231 KGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290
Query: 562 DPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+ + PT V+G L + +ACG H T+
Sbjct: 3291 NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326
Score = 359 (131.4 bits), Expect = 6.2e-26, Sum P(2) = 6.2e-26
Identities = 101/338 (29%), Positives = 164/338 (48%)
Query: 342 DSDVSHPKLIDALKNINVELVACGE--HHTCAVTLSGDMYTWGGSNC-NFGLLGHGNEMS 398
+SD P+L+ L + N+ +A HH A+ +G++Y+WG C + G LGHG+ +
Sbjct: 478 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG---CGDGGRLGHGDTVP 534
Query: 399 LWLPKKLN---GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 455
L PK ++ G G HV ++CG ++A +T+ G+L+T+G G +G LGHG + P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594
Query: 456 REVDSLKGLRTVRAACGVW--HTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXK 513
V LKGL+ + ACG T AV E G++++W
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTE------------NGQVWSWGDGDYGKLGRGGS 642
Query: 514 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTR 572
+ P + L + + +V CG ++ALT G VY+ G +LG + + + P
Sbjct: 643 DGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKL 702
Query: 573 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT--DDRNFPSLVEALK 630
+EG K ++ +A G H LT +EV++WG +N + H DT + P+ + L
Sbjct: 703 LEGLQGKKVID-VAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEPAALPGLD 759
Query: 631 DKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPF 668
K + I CG + + A W S + S+ G R+PF
Sbjct: 760 TKHIVGIACGPAQSFA-----WSSCSEWSI--GLRVPF 790
Score = 346 (126.9 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 90/283 (31%), Positives = 137/283 (48%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WGE DG LG G +RS D P+ +ES ++V ++A GG H+A VT
Sbjct: 4060 VYSWGEAE-DGKLGHG-NRS------PCDR--PRVIESLRGIEVVDVAAGGAHSACVTAA 4109
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G++++WG+ GRLGH D PKL++AL+ V +ACG + L+ D W
Sbjct: 4110 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSW 4169
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 443
+ ++G LG G +P K++ L G+ V V CG + +T +G ++T+G G +
Sbjct: 4170 GDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4228
Query: 444 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXX 503
LGHG V PR+V L+G + + A G H E G+++TW
Sbjct: 4229 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYTWGDN 4276
Query: 504 XXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
A P VAAL +V+CG + T+A +T+
Sbjct: 4277 DEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4319
Score = 344 (126.2 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 106/347 (30%), Positives = 162/347 (46%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
++ A G AA + + +VF WG +LG S + P + L +NV VA G
Sbjct: 2944 IRKKAAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 423
AVT+ G +Y G + N G LG G + ++ +P+++ L V V+ G H
Sbjct: 3002 KSLFAVTVEGKVYACGEAT-N-GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058
Query: 424 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 483
+T G++F++G+G G LGH R++ PR +++LK R ACG H+AA+
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS-- 3116
Query: 484 VGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGH--SLTV 541
G+L+TW +L P V L+ QV+CG + T+
Sbjct: 3117 ----------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166
Query: 542 ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 600
ALT G V++ G +G+LG + G +P +E +L V +I CG LT
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225
Query: 601 VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
V+TWGKG RLGHG P +VE L+ K++ + G A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Score = 334 (122.6 bits), Expect = 2.9e-23, Sum P(2) = 2.9e-23
Identities = 93/306 (30%), Positives = 143/306 (46%)
Query: 292 DSFVPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 349
D+ P+ V+ ++ IA G H + GEV+SWG GGRLGHG + PK
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPK 539
Query: 350 LIDALKNI----NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 405
+I A +V +ACG ++ A+T G++YTWG N +G LGHG+ +P +
Sbjct: 540 VISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN--YGRLGHGSSEDEAIPMLV 597
Query: 406 NGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 463
G L+G+ V V+CG T VT GQ++++GDG +G LG G TP+ ++ L+
Sbjct: 598 AG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 656
Query: 464 LRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVA 523
L V+ CG + A+ + G++++W +E P +
Sbjct: 657 LDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 704
Query: 524 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP-KANGKLPTRVEGKLTKNFV 582
L V+ G + +ALT V++ GS Q D + P + G TK+ V
Sbjct: 705 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIV 764
Query: 583 EEIACG 588
IACG
Sbjct: 765 G-IACG 769
Score = 294 (108.6 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 75/220 (34%), Positives = 112/220 (50%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG C G LG G V + +F K VV +IACG ++A +T +
Sbjct: 516 VYSWG-CGDGGRLGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAE 569
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMYTW 381
GE+++WG GRLGHG D + P L+ LK + V VACG + T AVT +G +++W
Sbjct: 570 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 629
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G + +G LG G PK + L+ + V V CG + +T GQ++++G G
Sbjct: 630 GDGD--YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDN 686
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
LGHG V P+ ++ L+G + + A G H A+ E
Sbjct: 687 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 267 (99.0 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 79/270 (29%), Positives = 121/270 (44%)
Query: 222 GSDGRTGHLKGLSGDTFRVXXXXXXXXXXX----XXXXXXXXXXXXVFIWGECTGD-GIL 276
G DG+ GH ++ D R+ ++ WG G+ G L
Sbjct: 3074 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3131
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 334
G G + + PK V+ + V +ACG R A + T +G VFSWG+
Sbjct: 3132 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 335 GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G+LG G + P+ I+ L V + CG + A+T SG ++TWG + + LGHG
Sbjct: 3183 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3240
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+++ + P+ + G L G + V+ G H VT +GQ++ +GD G G+G
Sbjct: 3241 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
P V L+G + R ACG H+ A V V
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWTTVDV 3329
Score = 250 (93.1 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 275 ILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELG 334
++G G+ YA V P E L V IAC + ++++ G V++
Sbjct: 425 VIGWGLIGWKYYANV----IGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT------ 474
Query: 335 GRLGHGVDSDVSHPKLIDALKNINVELVACGE--HHTCAVTLSGDMYTWGGSNC-NFGLL 391
+SD P+L+ L + N+ +A HH A+ +G++Y+WG C + G L
Sbjct: 475 ----QAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG---CGDGGRL 527
Query: 392 GHGNEMSLWLPKKLN---GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 448
GHG+ + L PK ++ G G HV ++CG ++A +T+ G+L+T+G G +G LGHG
Sbjct: 528 GHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS 587
Query: 449 RISVSTPREVDSLKGLRTVRAACGVW--HTAAVVE 481
+ P V LKGL+ + ACG T AV E
Sbjct: 588 SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 622
Score = 220 (82.5 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 75/291 (25%), Positives = 126/291 (43%)
Query: 375 SGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 432
SG +Y WG ++ G LG G ++ + P + L + + G VT+ G+
Sbjct: 3951 SGTIYGWGHNHR--GQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4005
Query: 433 LFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGXXXXX 490
L+ G G G LG G SVSTP ++S++ ++ V G H A+
Sbjct: 4006 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL----------- 4054
Query: 491 XXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 550
G++++W + P + +L V+ G + + +T G +Y
Sbjct: 4055 -SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4113
Query: 551 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGA 608
T G YG+LG + +L ++ L + V +IACG D LT V++WG G
Sbjct: 4114 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 655
G+LG G +D P +++L V + CG+ F+ A+ ++ W G
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Score = 216 (81.1 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 56/161 (34%), Positives = 86/161 (53%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
V+ WG+ GD G LG R GS G K PK +E LDV + CG + + +TK
Sbjct: 626 VWSWGD--GDYGKLG----RGGS-DGCK----TPKLIEKLQDLDVVKVRCGSQFSIALTK 674
Query: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G+V+SWG+ RLGHG + V +PKL++ L+ V VA G H A+T ++++WG
Sbjct: 675 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Query: 383 GSN-CNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 421
++ C H + + + P+ P L+ H+ ++CGP
Sbjct: 735 SNDQCQ-----HFDTLRVTKPEPAALPGLDTKHIVGIACGP 770
Score = 216 (81.1 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 83/287 (28%), Positives = 123/287 (42%)
Query: 422 WHTAVVTSAGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
W T +G ++ +G G LG G ++ V TP E +L LR V+ G AV
Sbjct: 3944 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCE--ALATLRPVQLIGGEQTLFAV 4000
Query: 480 VEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAAL--VEPNFCQVSCGH 537
GKL+ E+ PT + ++ V V+ G
Sbjct: 4001 T------------ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4048
Query: 538 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+AL++ G VY+ G G+LG + RV L V ++A G H A +T+
Sbjct: 4049 KHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA 4108
Query: 598 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH------K 651
++YTWGKG GRLGH D++D+ P LVEAL+ +V I CG+ +CL
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWS 4168
Query: 652 WVSG----VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 694
W G + + GC++P K + G+V C S+ SV
Sbjct: 4169 WGDGDYGKLGRGGSDGCKVPM----KIDSLTGLGVVKVE-CGSQFSV 4210
Score = 167 (63.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 47/133 (35%), Positives = 65/133 (48%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGD-Y 590
Q++C + L+ G VYT Y D A P V+G ++N V+ A D +
Sbjct: 455 QIACAEKRFLILSRNGRVYTQA---YNS--DTLA----PQLVQGLASRNIVKIAAHSDGH 505
Query: 591 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ----VKSIVCGTSFTAA 646
H L + EVY+WG G GRLGHGDT P ++ A KQ V I CG++++AA
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 647 IC----LHKWVSG 655
I L+ W G
Sbjct: 566 ITAEGELYTWGRG 578
Score = 40 (19.1 bits), Expect = 6.2e-26, Sum P(2) = 6.2e-26
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 901 LAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTP 949
+A G E+A A I+ + A+ + E N+++FH S TP
Sbjct: 939 MADGGLESALHAAITAEIQDIEAKKEAQKEKEIDEQEANASTFHRSRTP 987
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 457 (165.9 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 135/435 (31%), Positives = 207/435 (47%)
Query: 279 GIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
G++ G+K VP E+ L+V +A G + VT +G+V+S GE GRL
Sbjct: 2909 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 2968
Query: 338 GHGVDSD-VSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G G+ S V P+ I AL + V+ VA G H A+T+ G +++WG + G LGH
Sbjct: 2969 GLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD--GKLGHF 3026
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+ M+ P+ + L+ + ++CG H+A +TS+G+L+T+G G +G LGHGD +
Sbjct: 3027 SRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3085
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKE 514
P+ V L G R ++ ACG A + + G +F+W E
Sbjct: 3086 PKMVKVLLGHRVIQVACGS-RDAQTLAL---------TDEGLVFSWGDGDFGKLGRGGSE 3135
Query: 515 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRV 573
+P + L CQ+ CG ++ALT +G V+T G Y +LG + + P V
Sbjct: 3136 GCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 3195
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 633
EG K V +A G H +T +VY WG +G+ G+G T P+LV+ L+ ++
Sbjct: 3196 EGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3254
Query: 634 VKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGL-VYCHTCSSKK 692
+ + CG+S + A W + VD + S P F+ R L V SS
Sbjct: 3255 ITRVACGSSHSVA-----WTT-VDVATPS-VHEPVLFQTARDPLGASYLGVPSDADSSSS 3307
Query: 693 SVKASMAPN--PNKP 705
S K S N PN+P
Sbjct: 3308 SNKISGVSNCKPNRP 3322
Score = 454 (164.9 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 121/380 (31%), Positives = 181/380 (47%)
Query: 272 GDG-ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSW 329
G G I G G + G G++ VP E+ L + G + VT G++++
Sbjct: 3895 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3954
Query: 330 GEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCN 387
G GGRLG G VS P L+++++++ ++ VA G H A++ G++Y+WG
Sbjct: 3955 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAE 4012
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G LGHGN P+ + L GI V V+ G H+A VT+AG L+T+G G +G LGH
Sbjct: 4013 DGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4071
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
D P+ V++L+G R + ACG + +++W
Sbjct: 4072 DSEDQLKPKLVEALQGHRVIDIACGSGDAQTLC----------LTDDDTVWSWGDGDYGK 4121
Query: 508 XXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG 567
+ VP + +L +V CG +VALT +G VYT G Y +LG +
Sbjct: 4122 LGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4181
Query: 568 -KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV 626
+ P +V+G K + IA G H T EVYTWG G+LG G T+ P LV
Sbjct: 4182 VRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4240
Query: 627 EALKDKQVKSIVCGTSFTAA 646
AL+ K+V + CG++ T A
Sbjct: 4241 AALQGKKVNRVACGSAHTLA 4260
Score = 378 (138.1 bits), Expect = 4.3e-28, Sum P(2) = 4.3e-28
Identities = 114/405 (28%), Positives = 189/405 (46%)
Query: 275 ILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELG 334
++G G+ YA V P E L V +AC + ++++ G V++
Sbjct: 371 VIGWGLIGWKYYANV----IGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT------ 420
Query: 335 GRLGHGVDSDVSHPKLIDALKNINVELVACGE--HHTCAVTLSGDMYTWGGSNC-NFGLL 391
+SD+ P+L+ L + N+ +A HH A+ +G++Y+WG C + G L
Sbjct: 421 ----QAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG---CGDGGRL 473
Query: 392 GHGNEMSLWLPKKLN---GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 448
GHG+ + L PK ++ G G HV ++CG ++A +T+ G+L+T+G G +G LGHG
Sbjct: 474 GHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS 533
Query: 449 RISVSTPREVDSLKGLRTVRAACGVW--HTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXX 506
+ P V LKGL+ + ACG T AV E G++++W
Sbjct: 534 SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE------------NGQVWSWGDGDYG 581
Query: 507 XXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKA 565
+ P + L + + +V CG ++ALT G VY+ G +LG +
Sbjct: 582 KLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 641
Query: 566 NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT--DDRNFP 623
+ + P +EG K ++ +A G H LT +EV++WG +N + H DT + P
Sbjct: 642 HVRYPKLLEGLQGKKVID-VAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEP 698
Query: 624 SLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPF 668
+ + L K + I CG + + A W S + S+ G R+PF
Sbjct: 699 TALPGLDTKHIVGIACGPAQSFA-----WSSCSEWSI--GLRVPF 736
Score = 375 (137.1 bits), Expect = 8.2e-30, P = 8.2e-30
Identities = 109/337 (32%), Positives = 159/337 (47%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ GE T +G LG G+ SG+ V + + A+ S VV V + GGRHA +T
Sbjct: 2957 VYSCGEAT-NGRLGLGMS-SGT---VPIPRQIT-ALSSYVVKKVA-VHSGGRHATALTVD 3009
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G+VFSWGE G+LGH + P+LI+ALK + +ACG H+ A+T SG++YTWG
Sbjct: 3010 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3069
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTF 441
+G LGHG+ + PK + L G V V+CG T +T G +F++GDG F
Sbjct: 3070 GE--YGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3126
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
G LG G + P+ ++ L G + CG + A+ + G ++TW
Sbjct: 3127 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWTWG 3174
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
P V L V+ G +A+T +G VY G +GQ G
Sbjct: 3175 KGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3234
Query: 562 DPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+ + PT V+G L + +ACG H T+
Sbjct: 3235 NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3270
Score = 345 (126.5 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 90/283 (31%), Positives = 137/283 (48%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WGE DG LG G +RS D P+ +ES ++V ++A GG H+A VT
Sbjct: 4005 VYSWGEAE-DGKLGHG-NRS------PCDR--PRVIESLRGIEVVDVAAGGAHSACVTAA 4054
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G++++WG+ GRLGH D PKL++AL+ V +ACG + L+ D W
Sbjct: 4055 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSW 4114
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 443
+ ++G LG G +P K++ L G+ V V CG + +T +G ++T+G G +
Sbjct: 4115 GDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4173
Query: 444 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXX 503
LGHG V PR+V L+G + + A G H E G+++TW
Sbjct: 4174 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYTWGDN 4221
Query: 504 XXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
A P VAAL +V+CG + T+A +T+
Sbjct: 4222 DEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4264
Score = 342 (125.4 bits), Expect = 2.9e-26, P = 2.9e-26
Identities = 103/333 (30%), Positives = 157/333 (47%)
Query: 321 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 380
T + +VF WG +LG S + P + L +NV VA G AVT+ G +Y+
Sbjct: 2900 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 2959
Query: 381 WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 437
G + N G LG G + ++ +P+++ L V V+ G H +T G++F++G
Sbjct: 2960 CGEAT-N-GRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3016
Query: 438 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKL 497
+G G LGH R++ PR +++LK R ACG H+AA+ G+L
Sbjct: 3017 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS------------SGEL 3064
Query: 498 FTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGH--SLTVALTTTGHVYTMGSP 555
+TW +L P V L+ QV+CG + T+ALT G V++ G
Sbjct: 3065 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3124
Query: 556 VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 614
+G+LG + G +P +E +L V +I CG LT V+TWGKG RLGH
Sbjct: 3125 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3183
Query: 615 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
G P +VE L+ K++ + G A+
Sbjct: 3184 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3216
Score = 294 (108.6 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 75/220 (34%), Positives = 112/220 (50%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG C G LG G V + +F K VV +IACG ++A +T +
Sbjct: 462 VYSWG-CGDGGRLGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAE 515
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMYTW 381
GE+++WG GRLGHG D + P L+ LK + V VACG + T AVT +G +++W
Sbjct: 516 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 575
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G + +G LG G PK + L+ + V V CG + +T GQ++++G G
Sbjct: 576 GDGD--YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDN 632
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
LGHG V P+ ++ L+G + + A G H A+ E
Sbjct: 633 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 672
Score = 267 (99.0 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 79/270 (29%), Positives = 121/270 (44%)
Query: 222 GSDGRTGHLKGLSGDTFRVXXXXXXXXXXX----XXXXXXXXXXXXVFIWGECTGD-GIL 276
G DG+ GH ++ D R+ ++ WG G+ G L
Sbjct: 3018 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3075
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 334
G G + + PK V+ + V +ACG R A + T +G VFSWG+
Sbjct: 3076 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3126
Query: 335 GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G+LG G + P+ I+ L V + CG + A+T SG ++TWG + + LGHG
Sbjct: 3127 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3184
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+++ + P+ + G L G + V+ G H VT +GQ++ +GD G G+G
Sbjct: 3185 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3243
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
P V L+G + R ACG H+ A V V
Sbjct: 3244 PTLVQGLEGQKITRVACGSSHSVAWTTVDV 3273
Score = 219 (82.2 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 75/291 (25%), Positives = 126/291 (43%)
Query: 375 SGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 432
SG +Y WG ++ G LG G ++ + P + L + + G VT+ G+
Sbjct: 3896 SGTIYGWGHNHR--GQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 3950
Query: 433 LFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGXXXXX 490
L+ G G G LG G SVSTP ++S++ ++ V G H A+
Sbjct: 3951 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL----------- 3999
Query: 491 XXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 550
G++++W + P + +L V+ G + + +T G +Y
Sbjct: 4000 -SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4058
Query: 551 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGA 608
T G YG+LG + +L ++ L + V +IACG D LT V++WG G
Sbjct: 4059 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGD 4118
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 655
G+LG G +D P +++L V + CG+ F+ A+ ++ W G
Sbjct: 4119 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4169
Score = 215 (80.7 bits), Expect = 7.2e-29, Sum P(2) = 7.2e-29
Identities = 56/161 (34%), Positives = 86/161 (53%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
V+ WG+ GD G LG R GS G K PK +E LDV + CG + + +TK
Sbjct: 572 VWSWGD--GDYGKLG----RGGS-DGCK----TPKLIEKLQDLDVIKVRCGSQFSIALTK 620
Query: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G+V+SWG+ RLGHG + V +PKL++ L+ V VA G H A+T ++++WG
Sbjct: 621 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680
Query: 383 GSN-CNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 421
++ C H + + + P+ P L+ H+ ++CGP
Sbjct: 681 SNDQCQ-----HFDTLRVTKPEPTALPGLDTKHIVGIACGP 716
Score = 215 (80.7 bits), Expect = 7.2e-29, Sum P(2) = 7.2e-29
Identities = 83/287 (28%), Positives = 123/287 (42%)
Query: 422 WHTAVVTSAGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
W T +G ++ +G G LG G ++ V TP E +L LR V+ G AV
Sbjct: 3889 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCE--ALATLRPVQLIGGEQTLFAV 3945
Query: 480 VEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAAL--VEPNFCQVSCGH 537
GKL+ E+ PT + ++ V V+ G
Sbjct: 3946 T------------ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 3993
Query: 538 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+AL++ G VY+ G G+LG + RV L V ++A G H A +T+
Sbjct: 3994 KHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA 4053
Query: 598 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH------K 651
++YTWGKG GRLGH D++D+ P LVEAL+ +V I CG+ +CL
Sbjct: 4054 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWS 4113
Query: 652 WVSG----VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 694
W G + + GC++P K + G+V C S+ SV
Sbjct: 4114 WGDGDYGKLGRGGSDGCKVPM----KIDSLTGLGVVKVE-CGSQFSV 4155
Score = 41 (19.5 bits), Expect = 4.3e-28, Sum P(2) = 4.3e-28
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 630 KDKQVKSIVCGTSFTAA-ICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC--YNCGLV-YC 685
KD+ S GT + + +C H+W G D S I N + +N + C + YC
Sbjct: 1303 KDEDHCSSPGGTPISKSRLCSHRWALG-DHSQAFLQAIADN-NIQDYNVKDFLCQIERYC 1360
Query: 686 HTC 688
C
Sbjct: 1361 RQC 1363
Score = 40 (19.1 bits), Expect = 5.5e-28, Sum P(2) = 5.5e-28
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 901 LAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTP 949
+A G E+A A I+ + A+ + E N+++FH S TP
Sbjct: 883 MADGGLESALNAAITAEIQDIEAKKEAQKEKEIDEQEANASTFHRSRTP 931
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 456 (165.6 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 122/380 (32%), Positives = 181/380 (47%)
Query: 272 GDG-ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSW 329
G G I G G + G G++ VP E+ L + G + VT G++++
Sbjct: 3953 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4012
Query: 330 GEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCN 387
G GGRLG G VS P L+++++++ ++ VA G H A++ G++Y+WG
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAE 4070
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G LGHGN P+ + L GI V V+ G H+A VT+AG L+T+G G +G LGH
Sbjct: 4071 DGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4129
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
D P+ V++L+G R V ACG + +++W
Sbjct: 4130 DSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC----------LTDDDTVWSWGDGDYGK 4179
Query: 508 XXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG 567
+ VP + +L +V CG +VALT +G VYT G Y +LG +
Sbjct: 4180 LGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4239
Query: 568 -KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV 626
+ P +V+G K + IA G H T EVYTWG G+LG G T+ P LV
Sbjct: 4240 VRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4298
Query: 627 EALKDKQVKSIVCGTSFTAA 646
AL+ K+V + CG++ T A
Sbjct: 4299 AALQGKKVNRVACGSAHTLA 4318
Score = 451 (163.8 bits), Expect = 5.7e-38, P = 5.7e-38
Identities = 116/373 (31%), Positives = 185/373 (49%)
Query: 279 GIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
G++ G+K VP E+ L+V +A G + VT +G+V++ GE GRL
Sbjct: 2966 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3025
Query: 338 GHGVDSD-VSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G G+ S V P+ I AL + V+ VA G H A+T+ G +++WG + G LGH
Sbjct: 3026 GLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD--GKLGHF 3083
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+ M+ P+ + L+ + ++CG H+A +TS+G+L+T+G G +G LGHGD +
Sbjct: 3084 SRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3142
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKE 514
P+ V L G R ++ ACG A + + G +F+W E
Sbjct: 3143 PKMVKVLLGHRVIQVACGS-RDAQTLAL---------TDEGLVFSWGDGDFGKLGRGGSE 3192
Query: 515 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRV 573
+P + L CQ+ CG ++ALT +G V+T G Y +LG + + P V
Sbjct: 3193 GCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 633
EG K V +A G H +T +VY WG +G+ G+G T P+LV+ L+ ++
Sbjct: 3253 EGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3311
Query: 634 VKSIVCGTSFTAA 646
+ + CG+S + A
Sbjct: 3312 ITRVACGSSHSVA 3324
Score = 376 (137.4 bits), Expect = 6.5e-30, P = 6.5e-30
Identities = 109/337 (32%), Positives = 158/337 (46%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ GE T +G LG G+ SG+ V + + A+ S VV V + GGRHA +T
Sbjct: 3014 VYACGEAT-NGRLGLGLS-SGT---VPIPRQIT-ALSSYVVKKVA-VHSGGRHATALTVD 3066
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G+VFSWGE G+LGH + P+LI+ALK + +ACG H+ A+T SG++YTWG
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3126
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTF 441
+G LGHG+ + PK + L G V V+CG T +T G +F++GDG F
Sbjct: 3127 GE--YGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
G LG G + P+ ++ L G + CG + A+ + G ++TW
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWTWG 3231
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
P V L V+ G +A+T G VY G +GQ G
Sbjct: 3232 KGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291
Query: 562 DPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+ + PT V+G L + +ACG H T+
Sbjct: 3292 NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327
Score = 359 (131.4 bits), Expect = 4.4e-28, P = 4.4e-28
Identities = 101/338 (29%), Positives = 164/338 (48%)
Query: 342 DSDVSHPKLIDALKNINVELVACGE--HHTCAVTLSGDMYTWGGSNC-NFGLLGHGNEMS 398
+SD P+L+ L + N+ +A HH A+ +G++Y+WG C + G LGHG+ +
Sbjct: 479 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG---CGDGGRLGHGDTVP 535
Query: 399 LWLPKKLN---GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 455
L PK ++ G G HV ++CG ++A +T+ G+L+T+G G +G LGHG + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 456 REVDSLKGLRTVRAACGVW--HTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXK 513
V LKGL+ + ACG T AV E G++++W
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTE------------NGQVWSWGDGDYGKLGRGGS 643
Query: 514 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTR 572
+ P + L + + +V CG ++ALT G VY+ G +LG + + + P
Sbjct: 644 DGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKL 703
Query: 573 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT--DDRNFPSLVEALK 630
+EG K ++ +A G H LT +EV++WG +N + H DT + P+ + L
Sbjct: 704 LEGLQGKKVID-VAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEPAALPGLD 760
Query: 631 DKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPF 668
K + I CG + + A W S + S+ G R+PF
Sbjct: 761 TKHIVGIACGPAQSFA-----WSSCSEWSI--GLRVPF 791
Score = 347 (127.2 bits), Expect = 8.4e-27, P = 8.4e-27
Identities = 91/283 (32%), Positives = 137/283 (48%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WGE DG LG G +RS D P+ +ES ++V ++A GG H+A VT
Sbjct: 4063 VYSWGEAE-DGKLGHG-NRS------PCDR--PRVIESLRGIEVVDVAAGGAHSACVTAA 4112
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G++++WG+ GRLGH D PKL++AL+ V VACG + L+ D W
Sbjct: 4113 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSW 4172
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 443
+ ++G LG G +P K++ L G+ V V CG + +T +G ++T+G G +
Sbjct: 4173 GDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4231
Query: 444 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXX 503
LGHG V PR+V L+G + + A G H E G+++TW
Sbjct: 4232 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYTWGDN 4279
Query: 504 XXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
A P VAAL +V+CG + T+A +T+
Sbjct: 4280 DEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4322
Score = 344 (126.2 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 106/347 (30%), Positives = 162/347 (46%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
++ A G AA + + +VF WG +LG S + P + L +NV VA G
Sbjct: 2945 IRKKAAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 423
AVT+ G +Y G + N G LG G + ++ +P+++ L V V+ G H
Sbjct: 3003 KSLFAVTVEGKVYACGEAT-N-GRLGLGLSSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3059
Query: 424 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 483
+T G++F++G+G G LGH R++ PR +++LK R ACG H+AA+
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS-- 3117
Query: 484 VGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGH--SLTV 541
G+L+TW +L P V L+ QV+CG + T+
Sbjct: 3118 ----------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167
Query: 542 ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 600
ALT G V++ G +G+LG + G +P +E +L V +I CG LT
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3226
Query: 601 VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
V+TWGKG RLGHG P +VE L+ K++ + G A+
Sbjct: 3227 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Score = 334 (122.6 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 93/306 (30%), Positives = 143/306 (46%)
Query: 292 DSFVPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 349
D+ P+ V+ ++ IA G H + GEV+SWG GGRLGHG + PK
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPK 540
Query: 350 LIDALKNI----NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 405
+I A +V +ACG ++ A+T G++YTWG N +G LGHG+ +P +
Sbjct: 541 VISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN--YGRLGHGSSEDEAIPMLV 598
Query: 406 NGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 463
G L+G+ V V+CG T VT GQ++++GDG +G LG G TP+ ++ L+
Sbjct: 599 AG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657
Query: 464 LRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVA 523
L V+ CG + A+ + G++++W +E P +
Sbjct: 658 LDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Query: 524 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP-KANGKLPTRVEGKLTKNFV 582
L V+ G + +ALT V++ GS Q D + P + G TK+ V
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIV 765
Query: 583 EEIACG 588
IACG
Sbjct: 766 G-IACG 770
Score = 294 (108.6 bits), Expect = 3.8e-36, Sum P(2) = 3.8e-36
Identities = 75/220 (34%), Positives = 112/220 (50%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG C G LG G V + +F K VV +IACG ++A +T +
Sbjct: 517 VYSWG-CGDGGRLGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAE 570
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMYTW 381
GE+++WG GRLGHG D + P L+ LK + V VACG + T AVT +G +++W
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G + +G LG G PK + L+ + V V CG + +T GQ++++G G
Sbjct: 631 GDGD--YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDN 687
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
LGHG V P+ ++ L+G + + A G H A+ E
Sbjct: 688 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 269 (99.8 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 78/264 (29%), Positives = 119/264 (45%)
Query: 222 GSDGRTGHLKGLSGDTFRVXXXXXXXXXXX----XXXXXXXXXXXXVFIWGECTGD-GIL 276
G DG+ GH ++ D R+ ++ WG G+ G L
Sbjct: 3075 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3132
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 334
G G + + PK V+ + V +ACG R A + T +G VFSWG+
Sbjct: 3133 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183
Query: 335 GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G+LG G + P+ I+ L V + CG + A+T SG ++TWG + + LGHG
Sbjct: 3184 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3241
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+++ + P+ + G L G + V+ G H VT AGQ++ +GD G G+G
Sbjct: 3242 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3300
Query: 455 PREVDSLKGLRTVRAACGVWHTAA 478
P V L+G + R ACG H+ A
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVA 3324
Score = 250 (93.1 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 275 ILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELG 334
++G G+ YA V P E L V IAC + ++++ G V++
Sbjct: 426 VIGWGLIGWKYYANV----IGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT------ 475
Query: 335 GRLGHGVDSDVSHPKLIDALKNINVELVACGE--HHTCAVTLSGDMYTWGGSNC-NFGLL 391
+SD P+L+ L + N+ +A HH A+ +G++Y+WG C + G L
Sbjct: 476 ----QAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG---CGDGGRL 528
Query: 392 GHGNEMSLWLPKKLN---GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 448
GHG+ + L PK ++ G G HV ++CG ++A +T+ G+L+T+G G +G LGHG
Sbjct: 529 GHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS 588
Query: 449 RISVSTPREVDSLKGLRTVRAACGVW--HTAAVVE 481
+ P V LKGL+ + ACG T AV E
Sbjct: 589 SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623
Score = 219 (82.2 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 74/291 (25%), Positives = 126/291 (43%)
Query: 375 SGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 432
SG +Y WG ++ G LG G ++ + P + L + + G VT+ G+
Sbjct: 3954 SGTIYGWGHNHR--GQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4008
Query: 433 LFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGXXXXX 490
L+ G G G LG G SVSTP ++S++ ++ V G H A+
Sbjct: 4009 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL----------- 4057
Query: 491 XXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 550
G++++W + P + +L V+ G + + +T G +Y
Sbjct: 4058 -SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 4116
Query: 551 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGA 608
T G YG+LG + +L ++ L + V ++ACG D LT V++WG G
Sbjct: 4117 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4176
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 655
G+LG G +D P +++L V + CG+ F+ A+ ++ W G
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4227
Score = 216 (81.1 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 56/161 (34%), Positives = 86/161 (53%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
V+ WG+ GD G LG R GS G K PK +E LDV + CG + + +TK
Sbjct: 627 VWSWGD--GDYGKLG----RGGS-DGCK----TPKLIEKLQDLDVVKVRCGSQFSIALTK 675
Query: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G+V+SWG+ RLGHG + V +PKL++ L+ V VA G H A+T ++++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 383 GSN-CNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 421
++ C H + + + P+ P L+ H+ ++CGP
Sbjct: 736 SNDQCQ-----HFDTLRVTKPEPAALPGLDTKHIVGIACGP 771
Score = 215 (80.7 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 82/287 (28%), Positives = 123/287 (42%)
Query: 422 WHTAVVTSAGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
W T +G ++ +G G LG G ++ V TP E +L LR V+ G AV
Sbjct: 3947 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCE--ALATLRPVQLIGGEQTLFAV 4003
Query: 480 VEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAAL--VEPNFCQVSCGH 537
GKL+ E+ PT + ++ V V+ G
Sbjct: 4004 T------------ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG 4051
Query: 538 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+AL++ G VY+ G G+LG + RV L V ++A G H A +T+
Sbjct: 4052 KHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA 4111
Query: 598 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH------K 651
++YTWGKG GRLGH D++D+ P LVEAL+ +V + CG+ +CL
Sbjct: 4112 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWS 4171
Query: 652 WVSG----VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 694
W G + + GC++P K + G+V C S+ SV
Sbjct: 4172 WGDGDYGKLGRGGSDGCKVPM----KIDSLTGLGVVKVE-CGSQFSV 4213
Score = 204 (76.9 bits), Expect = 3.8e-36, Sum P(2) = 3.8e-36
Identities = 56/164 (34%), Positives = 77/164 (46%)
Query: 520 TCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLT 578
T +++ V S G T ALT G V++ G G+LG + N P +E T
Sbjct: 3041 TALSSYVVKKVAVHSGGRHAT-ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKT 3099
Query: 579 KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 638
K + +IACG H A LTS E+YTWG G GRLGHGD + P +V+ L +V +
Sbjct: 3100 KR-IRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVA 3158
Query: 639 CGTSFTAAICL------HKWVSG----VDQSMCSGCRIPFNFKR 672
CG+ + L W G + + GC IP N +R
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 3202
Score = 167 (63.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 47/133 (35%), Positives = 65/133 (48%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGD-Y 590
Q++C + L+ G VYT Y D A P V+G ++N V+ A D +
Sbjct: 456 QIACAEKRFLILSRNGRVYTQA---YNS--DTLA----PQLVQGLASRNIVKIAAHSDGH 506
Query: 591 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ----VKSIVCGTSFTAA 646
H L + EVY+WG G GRLGHGDT P ++ A KQ V I CG++++AA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 647 IC----LHKWVSG 655
I L+ W G
Sbjct: 567 ITAEGELYTWGRG 579
Score = 111 (44.1 bits), Expect = 7.9e-17, Sum P(2) = 7.9e-17
Identities = 40/161 (24%), Positives = 73/161 (45%)
Query: 325 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 384
EV WG +G ++V P + L N+ V +AC E ++ +G +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAY- 478
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEG--IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 442
N +L P+ + G + +++ S G H + + G+++++G G G
Sbjct: 479 ----------NSDTL-APQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526
Query: 443 VLGHGDRISVSTPREVDSLKGLRT----VRAACGVWHTAAV 479
LGHGD + + P+ + + G + V ACG ++AA+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI 567
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 454 (164.9 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 134/435 (30%), Positives = 208/435 (47%)
Query: 279 GIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
G++ G+K VP E+ L+V +A G + VT +G+V++ GE GRL
Sbjct: 2886 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 2945
Query: 338 GHGVDSD-VSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G G+ S V P+ I AL + V+ VA G H A+T+ G +++WG + G LGH
Sbjct: 2946 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD--GKLGHF 3003
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+ M+ P+ + L+ + ++CG H+A +TS+G+L+T+G G +G LGHGD +
Sbjct: 3004 SRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3062
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKE 514
P+ V L G R ++ ACG A + + G +F+W E
Sbjct: 3063 PKMVKVLLGHRVIQVACGS-RDAQTLAL---------TDEGLVFSWGDGDFGKLGRGGSE 3112
Query: 515 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRV 573
+P + L CQ+ CG ++ALT +G V+T G Y +LG + + P V
Sbjct: 3113 GCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 3172
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 633
EG K V +A G H +T +VY WG +G+ G+G T P+LV+ L+ ++
Sbjct: 3173 EGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3231
Query: 634 VKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGL-VYCHTCSSKK 692
+ + CG+S + A W + VD + S P F+ R L V SS
Sbjct: 3232 ITRVACGSSHSVA-----WTT-VDVATPS-VHEPVLFQTARDPLGASYLGVPSDADSSPA 3284
Query: 693 SVKASMAPN--PNKP 705
S K + A N PN+P
Sbjct: 3285 SNKINGANNSKPNRP 3299
Score = 447 (162.4 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 120/380 (31%), Positives = 180/380 (47%)
Query: 272 GDG-ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSW 329
G G I G G + G G++ VP E+ L + G + VT G++++
Sbjct: 3873 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 3932
Query: 330 GEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCN 387
G GGRLG G VS P L+++++++ ++ VA G H A++ G++Y+WG
Sbjct: 3933 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAE 3990
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G LGHGN P+ + L G V V+ G H+A VT+AG L+T+G G +G LGH
Sbjct: 3991 DGKLGHGNRSPCDRPRVIES-LRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4049
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
D P+ V++L+G R V ACG + +++W
Sbjct: 4050 DSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC----------LTDDDTVWSWGDGDYGK 4099
Query: 508 XXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG 567
+ VP + +L +V CG +VALT +G VYT G Y +LG +
Sbjct: 4100 LGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4159
Query: 568 -KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV 626
+ P +V+G K + IA G H + EVYTWG G+LG G T+ P LV
Sbjct: 4160 VRRPRQVQGLQGKKVIA-IATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4218
Query: 627 EALKDKQVKSIVCGTSFTAA 646
AL+ K+V + CG++ T A
Sbjct: 4219 AALQGKKVNRVACGSAHTLA 4238
Score = 378 (138.1 bits), Expect = 3.9e-30, P = 3.9e-30
Identities = 110/337 (32%), Positives = 158/337 (46%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ GE T +G LG GI SG+ V + + A+ S VV V + GGRHA +T
Sbjct: 2934 VYACGEAT-NGRLGLGIS-SGT---VPIPRQIT-ALSSYVVKKVA-VHSGGRHATALTVD 2986
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G+VFSWGE G+LGH + P+LI+ALK + +ACG H+ A+T SG++YTWG
Sbjct: 2987 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3046
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTF 441
+G LGHG+ + PK + L G V V+CG T +T G +F++GDG F
Sbjct: 3047 GE--YGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3103
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
G LG G + P+ ++ L G + CG + A+ + G ++TW
Sbjct: 3104 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWTWG 3151
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
P V L V+ G +A+T G VY G +GQ G
Sbjct: 3152 KGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3211
Query: 562 DPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+ + PT V+G L + +ACG H T+
Sbjct: 3212 NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3247
Score = 363 (132.8 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 103/338 (30%), Positives = 164/338 (48%)
Query: 342 DSDVSHPKLIDALKNINVELVACGE--HHTCAVTLSGDMYTWGGSNC-NFGLLGHGNEMS 398
+SD P+L+ L + N+ +A HH A+ +G++Y+WG C + G LGHG+ +
Sbjct: 389 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG---CGDGGRLGHGDTVP 445
Query: 399 LWLPKKLN---GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 455
L PK ++ G G HV ++CG ++A +T+ G+L+T+G G +G LGHG + P
Sbjct: 446 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 505
Query: 456 REVDSLKGLRTVRAACGVW--HTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXK 513
V LKGL+ + ACG T AV E G++++W
Sbjct: 506 MLVAGLKGLKVIDVACGSGDAQTLAVTE------------NGQVWSWGDGDYGKLGRGGS 553
Query: 514 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTR 572
+ P + L + + +V CG +VALT G VY+ G +LG + + + P
Sbjct: 554 DGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKL 613
Query: 573 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT--DDRNFPSLVEALK 630
+EG K ++ +A G H LT +EV++WG +N + H DT + PS + L
Sbjct: 614 LEGLQGKKVID-VAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEPSALPGLD 670
Query: 631 DKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPF 668
K + I CG + + A W S + S+ G R+PF
Sbjct: 671 TKHIVGIACGPAQSFA-----WSSCSEWSI--GLRVPF 701
Score = 344 (126.2 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 106/347 (30%), Positives = 162/347 (46%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
++ A G AA + + +VF WG +LG S + P + L +NV VA G
Sbjct: 2865 IRKKAAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2922
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 423
AVT+ G +Y G + N G LG G + ++ +P+++ L V V+ G H
Sbjct: 2923 KSLFAVTVEGKVYACGEAT-N-GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 2979
Query: 424 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 483
+T G++F++G+G G LGH R++ PR +++LK R ACG H+AA+
Sbjct: 2980 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS-- 3037
Query: 484 VGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGH--SLTV 541
G+L+TW +L P V L+ QV+CG + T+
Sbjct: 3038 ----------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3087
Query: 542 ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 600
ALT G V++ G +G+LG + G +P +E +L V +I CG LT
Sbjct: 3088 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3146
Query: 601 VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
V+TWGKG RLGHG P +VE L+ K++ + G A+
Sbjct: 3147 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3193
Score = 342 (125.4 bits), Expect = 2.8e-26, P = 2.8e-26
Identities = 91/283 (32%), Positives = 136/283 (48%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WGE DG LG G +RS D P+ +ES +V ++A GG H+A VT
Sbjct: 3983 VYSWGEAE-DGKLGHG-NRS------PCDR--PRVIESLRGTEVVDVAAGGAHSACVTAA 4032
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G++++WG+ GRLGH D PKL++AL+ V VACG + L+ D W
Sbjct: 4033 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSW 4092
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 443
+ ++G LG G +P K++ L G+ V V CG + +T +G ++T+G G +
Sbjct: 4093 GDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4151
Query: 444 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXX 503
LGHG V PR+V L+G + + A G H E G+++TW
Sbjct: 4152 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSE------------DGEVYTWGDN 4199
Query: 504 XXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
A P VAAL +V+CG + T+A +T+
Sbjct: 4200 DEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4242
Score = 336 (123.3 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 93/306 (30%), Positives = 144/306 (47%)
Query: 292 DSFVPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 349
D+ P+ V+ ++ IA G H + GEV+SWG GGRLGHG + PK
Sbjct: 391 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPK 450
Query: 350 LIDALKNI----NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 405
+I A +V +ACG ++ A+T G++YTWG N +G LGHG+ +P +
Sbjct: 451 VISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN--YGRLGHGSSEDEAIPMLV 508
Query: 406 NGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 463
G L+G+ V V+CG T VT GQ++++GDG +G LG G TP+ ++ L+
Sbjct: 509 AG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 567
Query: 464 LRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVA 523
L V+ CG + A+ + G++++W +E P +
Sbjct: 568 LDVVKVRCGSQFSVALTK------------DGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 615
Query: 524 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP-KANGKLPTRVEGKLTKNFV 582
L V+ G + +ALT V++ GS Q D + P+ + G TK+ V
Sbjct: 616 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIV 675
Query: 583 EEIACG 588
IACG
Sbjct: 676 G-IACG 680
Score = 295 (108.9 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 75/220 (34%), Positives = 112/220 (50%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG C G LG G V + +F K VV +IACG ++A +T +
Sbjct: 427 VYSWG-CGDGGRLGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAE 480
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMYTW 381
GE+++WG GRLGHG D + P L+ LK + V VACG + T AVT +G +++W
Sbjct: 481 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 540
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G + +G LG G PK + L+ + V V CG + +T GQ++++G G
Sbjct: 541 GDGD--YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDN 597
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
LGHG V P+ ++ L+G + + A G H A+ E
Sbjct: 598 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 637
Score = 270 (100.1 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 80/270 (29%), Positives = 121/270 (44%)
Query: 222 GSDGRTGHLKGLSGDTFRVXXXXXXXXXXX----XXXXXXXXXXXXVFIWGECTGD-GIL 276
G DG+ GH ++ D R+ ++ WG G+ G L
Sbjct: 2995 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3052
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 334
G G + + PK V+ + V +ACG R A + T +G VFSWG+
Sbjct: 3053 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3103
Query: 335 GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G+LG G + P+ I+ L V + CG + A+T SG ++TWG + + LGHG
Sbjct: 3104 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3161
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+++ + P+ + G L G + V+ G H VT AGQ++ +GD G G+G
Sbjct: 3162 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3220
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
P V L+G + R ACG H+ A V V
Sbjct: 3221 PTLVQGLEGQKITRVACGSSHSVAWTTVDV 3250
Score = 250 (93.1 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 275 ILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELG 334
++G G+ YA V P E L V IAC + ++++ G V++
Sbjct: 336 VIGWGLIGWKYYANV----IGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT------ 385
Query: 335 GRLGHGVDSDVSHPKLIDALKNINVELVACGE--HHTCAVTLSGDMYTWGGSNC-NFGLL 391
+SD P+L+ L + N+ +A HH A+ +G++Y+WG C + G L
Sbjct: 386 ----QAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG---CGDGGRL 438
Query: 392 GHGNEMSLWLPKKLN---GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 448
GHG+ + L PK ++ G G HV ++CG ++A +T+ G+L+T+G G +G LGHG
Sbjct: 439 GHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS 498
Query: 449 RISVSTPREVDSLKGLRTVRAACGVW--HTAAVVE 481
+ P V LKGL+ + ACG T AV E
Sbjct: 499 SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 533
Score = 221 (82.9 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 73/289 (25%), Positives = 123/289 (42%)
Query: 375 SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 434
SG +Y WG ++ G LG + +P L + + G VT+ G+L+
Sbjct: 3874 SGTIYGWGHNHR--GQLGGIEGAKVKVPTPCEA-LAALRPVQLIGGEQTLFAVTADGKLY 3930
Query: 435 TFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGXXXXXXX 492
G G G LG G SVSTP ++S++ ++ V G H A+
Sbjct: 3931 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL------------S 3978
Query: 493 XXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 552
G++++W + P + +L V+ G + + +T G +YT
Sbjct: 3979 SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTW 4038
Query: 553 GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGANG 610
G YG+LG + +L ++ L + V ++ACG D LT V++WG G G
Sbjct: 4039 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYG 4098
Query: 611 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 655
+LG G +D P +++L V + CG+ F+ A+ ++ W G
Sbjct: 4099 KLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4147
Score = 220 (82.5 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 82/287 (28%), Positives = 123/287 (42%)
Query: 422 WHTAVVTSAGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
W T +G ++ +G G LG G ++ V TP E +L LR V+ G AV
Sbjct: 3867 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCE--ALAALRPVQLIGGEQTLFAV 3923
Query: 480 VEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAAL--VEPNFCQVSCGH 537
GKL+ E+ PT + ++ V V+ G
Sbjct: 3924 T------------ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGG 3971
Query: 538 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+AL++ G VY+ G G+LG + RV L V ++A G H A +T+
Sbjct: 3972 KHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTA 4031
Query: 598 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH------K 651
++YTWGKG GRLGH D++D+ P LVEAL+ +V + CG+ +CL
Sbjct: 4032 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWS 4091
Query: 652 WVSG----VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 694
W G + + GC++P K + G+V C S+ SV
Sbjct: 4092 WGDGDYGKLGRGGSDGCKVPM----KIDSLTGLGVVKVE-CGSQFSV 4133
Score = 216 (81.1 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 56/161 (34%), Positives = 86/161 (53%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
V+ WG+ GD G LG R GS G K PK +E LDV + CG + + +TK
Sbjct: 537 VWSWGD--GDYGKLG----RGGS-DGCK----TPKLIEKLQDLDVVKVRCGSQFSVALTK 585
Query: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G+V+SWG+ RLGHG + V +PKL++ L+ V VA G H A+T ++++WG
Sbjct: 586 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 645
Query: 383 GSN-CNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 421
++ C H + + + P+ P L+ H+ ++CGP
Sbjct: 646 SNDQCQ-----HFDTLRVTKPEPSALPGLDTKHIVGIACGP 681
Score = 167 (63.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 47/133 (35%), Positives = 65/133 (48%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGD-Y 590
Q++C + L+ G VYT Y D A P V+G ++N V+ A D +
Sbjct: 366 QIACAEKRFLILSRNGRVYTQA---YNS--DTLA----PQLVQGLASRNIVKIAAHSDGH 416
Query: 591 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ----VKSIVCGTSFTAA 646
H L + EVY+WG G GRLGHGDT P ++ A KQ V I CG++++AA
Sbjct: 417 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 476
Query: 647 IC----LHKWVSG 655
I L+ W G
Sbjct: 477 ITAEGELYTWGRG 489
Score = 40 (19.1 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 901 LAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTP 949
+A G E+A A I+ + A+ + E N+++FH S TP
Sbjct: 850 MADGGLESALNAAITAEIQDIEAKKEAQKEKEIDEQEANASTFHRSRTP 898
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 454 (164.9 bits), Expect = 2.7e-38, P = 2.7e-38
Identities = 134/435 (30%), Positives = 208/435 (47%)
Query: 279 GIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
G++ G+K VP E+ L+V +A G + VT +G+V++ GE GRL
Sbjct: 2976 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 3035
Query: 338 GHGVDSD-VSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G G+ S V P+ I AL + V+ VA G H A+T+ G +++WG + G LGH
Sbjct: 3036 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD--GKLGHF 3093
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+ M+ P+ + L+ + ++CG H+A +TS+G+L+T+G G +G LGHGD +
Sbjct: 3094 SRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 3152
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKE 514
P+ V L G R ++ ACG A + + G +F+W E
Sbjct: 3153 PKMVKVLLGHRVIQVACGS-RDAQTLAL---------TDEGLVFSWGDGDFGKLGRGGSE 3202
Query: 515 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRV 573
+P + L CQ+ CG ++ALT +G V+T G Y +LG + + P V
Sbjct: 3203 GCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 3262
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 633
EG K V +A G H +T +VY WG +G+ G+G T P+LV+ L+ ++
Sbjct: 3263 EGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3321
Query: 634 VKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGL-VYCHTCSSKK 692
+ + CG+S + A W + VD + S P F+ R L V SS
Sbjct: 3322 ITRVACGSSHSVA-----WTT-VDVATPS-VHEPVLFQTARDPLGASYLGVPSDADSSPA 3374
Query: 693 SVKASMAPN--PNKP 705
S K + A N PN+P
Sbjct: 3375 SNKINGANNSKPNRP 3389
Score = 447 (162.4 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 120/380 (31%), Positives = 180/380 (47%)
Query: 272 GDG-ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSW 329
G G I G G + G G++ VP E+ L + G + VT G++++
Sbjct: 3963 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4022
Query: 330 GEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCN 387
G GGRLG G VS P L+++++++ ++ VA G H A++ G++Y+WG
Sbjct: 4023 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG--EAE 4080
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G LGHGN P+ + L G V V+ G H+A VT+AG L+T+G G +G LGH
Sbjct: 4081 DGKLGHGNRSPCDRPRVIES-LRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHS 4139
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
D P+ V++L+G R V ACG + +++W
Sbjct: 4140 DSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC----------LTDDDTVWSWGDGDYGK 4189
Query: 508 XXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG 567
+ VP + +L +V CG +VALT +G VYT G Y +LG +
Sbjct: 4190 LGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4249
Query: 568 -KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV 626
+ P +V+G K + IA G H + EVYTWG G+LG G T+ P LV
Sbjct: 4250 VRRPRQVQGLQGKKVIA-IATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4308
Query: 627 EALKDKQVKSIVCGTSFTAA 646
AL+ K+V + CG++ T A
Sbjct: 4309 AALQGKKVNRVACGSAHTLA 4328
Score = 378 (138.1 bits), Expect = 4.0e-30, P = 4.0e-30
Identities = 110/337 (32%), Positives = 158/337 (46%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ GE T +G LG GI SG+ V + + A+ S VV V + GGRHA +T
Sbjct: 3024 VYACGEAT-NGRLGLGIS-SGT---VPIPRQIT-ALSSYVVKKVA-VHSGGRHATALTVD 3076
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G+VFSWGE G+LGH + P+LI+ALK + +ACG H+ A+T SG++YTWG
Sbjct: 3077 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 3136
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTF 441
+G LGHG+ + PK + L G V V+CG T +T G +F++GDG F
Sbjct: 3137 GE--YGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3193
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
G LG G + P+ ++ L G + CG + A+ + G ++TW
Sbjct: 3194 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWTWG 3241
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
P V L V+ G +A+T G VY G +GQ G
Sbjct: 3242 KGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3301
Query: 562 DPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+ + PT V+G L + +ACG H T+
Sbjct: 3302 NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3337
Score = 363 (132.8 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
Identities = 103/338 (30%), Positives = 164/338 (48%)
Query: 342 DSDVSHPKLIDALKNINVELVACGE--HHTCAVTLSGDMYTWGGSNC-NFGLLGHGNEMS 398
+SD P+L+ L + N+ +A HH A+ +G++Y+WG C + G LGHG+ +
Sbjct: 479 NSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG---CGDGGRLGHGDTVP 535
Query: 399 LWLPKKLN---GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 455
L PK ++ G G HV ++CG ++A +T+ G+L+T+G G +G LGHG + P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595
Query: 456 REVDSLKGLRTVRAACGVW--HTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXK 513
V LKGL+ + ACG T AV E G++++W
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTE------------NGQVWSWGDGDYGKLGRGGS 643
Query: 514 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTR 572
+ P + L + + +V CG +VALT G VY+ G +LG + + + P
Sbjct: 644 DGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKL 703
Query: 573 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT--DDRNFPSLVEALK 630
+EG K ++ +A G H LT +EV++WG +N + H DT + PS + L
Sbjct: 704 LEGLQGKKVID-VAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEPSALPGLD 760
Query: 631 DKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPF 668
K + I CG + + A W S + S+ G R+PF
Sbjct: 761 TKHIVGIACGPAQSFA-----WSSCSEWSI--GLRVPF 791
Score = 344 (126.2 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 106/347 (30%), Positives = 162/347 (46%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
++ A G AA + + +VF WG +LG S + P + L +NV VA G
Sbjct: 2955 IRKKAAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3012
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWH 423
AVT+ G +Y G + N G LG G + ++ +P+++ L V V+ G H
Sbjct: 3013 KSLFAVTVEGKVYACGEAT-N-GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3069
Query: 424 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 483
+T G++F++G+G G LGH R++ PR +++LK R ACG H+AA+
Sbjct: 3070 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS-- 3127
Query: 484 VGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGH--SLTV 541
G+L+TW +L P V L+ QV+CG + T+
Sbjct: 3128 ----------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3177
Query: 542 ALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 600
ALT G V++ G +G+LG + G +P +E +L V +I CG LT
Sbjct: 3178 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3236
Query: 601 VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
V+TWGKG RLGHG P +VE L+ K++ + G A+
Sbjct: 3237 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3283
Score = 342 (125.4 bits), Expect = 2.9e-26, P = 2.9e-26
Identities = 91/283 (32%), Positives = 136/283 (48%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WGE DG LG G +RS D P+ +ES +V ++A GG H+A VT
Sbjct: 4073 VYSWGEAE-DGKLGHG-NRS------PCDR--PRVIESLRGTEVVDVAAGGAHSACVTAA 4122
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G++++WG+ GRLGH D PKL++AL+ V VACG + L+ D W
Sbjct: 4123 GDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSW 4182
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 443
+ ++G LG G +P K++ L G+ V V CG + +T +G ++T+G G +
Sbjct: 4183 GDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4241
Query: 444 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXX 503
LGHG V PR+V L+G + + A G H E G+++TW
Sbjct: 4242 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSE------------DGEVYTWGDN 4289
Query: 504 XXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
A P VAAL +V+CG + T+A +T+
Sbjct: 4290 DEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4332
Score = 336 (123.3 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 93/306 (30%), Positives = 144/306 (47%)
Query: 292 DSFVPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 349
D+ P+ V+ ++ IA G H + GEV+SWG GGRLGHG + PK
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPK 540
Query: 350 LIDALKNI----NVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 405
+I A +V +ACG ++ A+T G++YTWG N +G LGHG+ +P +
Sbjct: 541 VISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN--YGRLGHGSSEDEAIPMLV 598
Query: 406 NGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 463
G L+G+ V V+CG T VT GQ++++GDG +G LG G TP+ ++ L+
Sbjct: 599 AG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657
Query: 464 LRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVA 523
L V+ CG + A+ + G++++W +E P +
Sbjct: 658 LDVVKVRCGSQFSVALTK------------DGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Query: 524 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP-KANGKLPTRVEGKLTKNFV 582
L V+ G + +ALT V++ GS Q D + P+ + G TK+ V
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIV 765
Query: 583 EEIACG 588
IACG
Sbjct: 766 G-IACG 770
Score = 295 (108.9 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 75/220 (34%), Positives = 112/220 (50%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG C G LG G V + +F K VV +IACG ++A +T +
Sbjct: 517 VYSWG-CGDGGRLGHGDTVPLEEPKV-ISAFSGKQAGKHVV----HIACGSTYSAAITAE 570
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMYTW 381
GE+++WG GRLGHG D + P L+ LK + V VACG + T AVT +G +++W
Sbjct: 571 GELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSW 630
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G + +G LG G PK + L+ + V V CG + +T GQ++++G G
Sbjct: 631 GDGD--YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDN 687
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
LGHG V P+ ++ L+G + + A G H A+ E
Sbjct: 688 QRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 270 (100.1 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 80/270 (29%), Positives = 121/270 (44%)
Query: 222 GSDGRTGHLKGLSGDTFRVXXXXXXXXXXX----XXXXXXXXXXXXVFIWGECTGD-GIL 276
G DG+ GH ++ D R+ ++ WG G+ G L
Sbjct: 3085 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG--LGEYGRL 3142
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELG 334
G G + + PK V+ + V +ACG R A + T +G VFSWG+
Sbjct: 3143 GHGDNTT---------QLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3193
Query: 335 GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G+LG G + P+ I+ L V + CG + A+T SG ++TWG + + LGHG
Sbjct: 3194 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHG 3251
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+++ + P+ + G L G + V+ G H VT AGQ++ +GD G G+G
Sbjct: 3252 SDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3310
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
P V L+G + R ACG H+ A V V
Sbjct: 3311 PTLVQGLEGQKITRVACGSSHSVAWTTVDV 3340
Score = 250 (93.1 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 275 ILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELG 334
++G G+ YA V P E L V IAC + ++++ G V++
Sbjct: 426 VIGWGLIGWKYYANV----IGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT------ 475
Query: 335 GRLGHGVDSDVSHPKLIDALKNINVELVACGE--HHTCAVTLSGDMYTWGGSNC-NFGLL 391
+SD P+L+ L + N+ +A HH A+ +G++Y+WG C + G L
Sbjct: 476 ----QAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWG---CGDGGRL 528
Query: 392 GHGNEMSLWLPKKLN---GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 448
GHG+ + L PK ++ G G HV ++CG ++A +T+ G+L+T+G G +G LGHG
Sbjct: 529 GHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS 588
Query: 449 RISVSTPREVDSLKGLRTVRAACGVW--HTAAVVE 481
+ P V LKGL+ + ACG T AV E
Sbjct: 589 SEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTE 623
Score = 221 (82.9 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 73/289 (25%), Positives = 123/289 (42%)
Query: 375 SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 434
SG +Y WG ++ G LG + +P L + + G VT+ G+L+
Sbjct: 3964 SGTIYGWGHNHR--GQLGGIEGAKVKVPTPCEA-LAALRPVQLIGGEQTLFAVTADGKLY 4020
Query: 435 TFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGXXXXXXX 492
G G G LG G SVSTP ++S++ ++ V G H A+
Sbjct: 4021 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL------------S 4068
Query: 493 XXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTM 552
G++++W + P + +L V+ G + + +T G +YT
Sbjct: 4069 SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTW 4128
Query: 553 GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGANG 610
G YG+LG + +L ++ L + V ++ACG D LT V++WG G G
Sbjct: 4129 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYG 4188
Query: 611 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 655
+LG G +D P +++L V + CG+ F+ A+ ++ W G
Sbjct: 4189 KLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4237
Score = 220 (82.5 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 82/287 (28%), Positives = 123/287 (42%)
Query: 422 WHTAVVTSAGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
W T +G ++ +G G LG G ++ V TP E +L LR V+ G AV
Sbjct: 3957 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCE--ALAALRPVQLIGGEQTLFAV 4013
Query: 480 VEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAAL--VEPNFCQVSCGH 537
GKL+ E+ PT + ++ V V+ G
Sbjct: 4014 T------------ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGG 4061
Query: 538 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+AL++ G VY+ G G+LG + RV L V ++A G H A +T+
Sbjct: 4062 KHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTA 4121
Query: 598 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH------K 651
++YTWGKG GRLGH D++D+ P LVEAL+ +V + CG+ +CL
Sbjct: 4122 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWS 4181
Query: 652 WVSG----VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 694
W G + + GC++P K + G+V C S+ SV
Sbjct: 4182 WGDGDYGKLGRGGSDGCKVPM----KIDSLTGLGVVKVE-CGSQFSV 4223
Score = 216 (81.1 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 56/161 (34%), Positives = 86/161 (53%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
V+ WG+ GD G LG R GS G K PK +E LDV + CG + + +TK
Sbjct: 627 VWSWGD--GDYGKLG----RGGS-DGCK----TPKLIEKLQDLDVVKVRCGSQFSVALTK 675
Query: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G+V+SWG+ RLGHG + V +PKL++ L+ V VA G H A+T ++++WG
Sbjct: 676 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Query: 383 GSN-CNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGP 421
++ C H + + + P+ P L+ H+ ++CGP
Sbjct: 736 SNDQCQ-----HFDTLRVTKPEPSALPGLDTKHIVGIACGP 771
Score = 167 (63.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 47/133 (35%), Positives = 65/133 (48%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGD-Y 590
Q++C + L+ G VYT Y D A P V+G ++N V+ A D +
Sbjct: 456 QIACAEKRFLILSRNGRVYTQA---YNS--DTLA----PQLVQGLASRNIVKIAAHSDGH 506
Query: 591 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ----VKSIVCGTSFTAA 646
H L + EVY+WG G GRLGHGDT P ++ A KQ V I CG++++AA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 647 IC----LHKWVSG 655
I L+ W G
Sbjct: 567 ITAEGELYTWGRG 579
Score = 40 (19.1 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 901 LAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTP 949
+A G E+A A I+ + A+ + E N+++FH S TP
Sbjct: 940 MADGGLESALNAAITAEIQDIEAKKEAQKEKEIDEQEANASTFHRSRTP 988
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 457 (165.9 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 117/380 (30%), Positives = 182/380 (47%)
Query: 272 GDG-ILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSW 329
G G I G G + G G++ VP E+ L + G + VT G++++
Sbjct: 3948 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYAT 4007
Query: 330 GEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCN 387
G GGRLG G VS P L+++++++ + VA G H A++ G++Y+WG
Sbjct: 4008 GYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWG--EAE 4065
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G LGHGN P+ + L G+ V ++ G H+A +T++G+L+T+G G +G LGHG
Sbjct: 4066 DGKLGHGNRSPCDRPRVIES-LRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHG 4124
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
D P+ V++L+G R + ACG + +++W
Sbjct: 4125 DSEDQLKPKLVEALQGHRVIDVACGSGDAQTLC----------LTDDDMVWSWGDGDYGK 4174
Query: 508 XXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG 567
+ VP + +L +V CG +VALT +G VYT G Y +LG +
Sbjct: 4175 LGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4234
Query: 568 -KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV 626
+ P +V+G K + IA G H T EVYTWG G+LG G T+ P LV
Sbjct: 4235 VRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4293
Query: 627 EALKDKQVKSIVCGTSFTAA 646
AL+ K++ + CG++ T A
Sbjct: 4294 AALQGKKINRVACGSAHTLA 4313
Score = 454 (164.9 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
Identities = 115/373 (30%), Positives = 185/373 (49%)
Query: 279 GIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
G++ G+K VP E+ L+V +A G + VT +G+V++ GE GRL
Sbjct: 2961 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRL 3020
Query: 338 GHGVDSD-VSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
G G+ S + P+ I AL N V+ VA G H A+T+ G +++WG + G LGH
Sbjct: 3021 GLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD--GKLGHF 3078
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST 454
+ M+ P+ + L+ + ++CG H+A +TS+G+L+++G G +G LGHGD +
Sbjct: 3079 SRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLR 3137
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKE 514
P+ V L G R V+ ACG A + + G +F+W E
Sbjct: 3138 PKLVKVLLGHRVVQVACGS-RDAQTLAL---------TDEGMVFSWGDGDFGKLGRGGSE 3187
Query: 515 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRV 573
+P + L CQ+ CG ++ALT +G V+T G Y +LG + + P V
Sbjct: 3188 GCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMV 3247
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 633
EG K V +A G H +T +V+ WG +G+ G+G T P+LV+ L+ ++
Sbjct: 3248 EGLRGKKIVH-VAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK 3306
Query: 634 VKSIVCGTSFTAA 646
+ + CG+S + A
Sbjct: 3307 ITRVACGSSHSVA 3319
Score = 373 (136.4 bits), Expect = 7.8e-26, Sum P(3) = 7.8e-26
Identities = 107/337 (31%), Positives = 158/337 (46%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ GE T +G LG G+ SG+ + S A+ + VV V + GGRHA +T
Sbjct: 3009 VYACGEAT-NGRLGLGLS-SGTIPIPRQIS----ALSNYVVKKVA-VHSGGRHAMALTVD 3061
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G+VFSWGE G+LGH + P+LI+ALK + +ACG H+ A+T SG++Y+WG
Sbjct: 3062 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGL 3121
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTF 441
+G LGHG+ + PK + L G V V+CG T +T G +F++GDG F
Sbjct: 3122 GE--YGRLGHGDNTTQLRPKLVK-VLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDF 3178
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
G LG G + P+ ++ L G + CG + A+ + G ++TW
Sbjct: 3179 GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWTWG 3226
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
P V L V+ G +A+T TG V+ G +GQ G
Sbjct: 3227 KGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQG 3286
Query: 562 DPKAN-GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+ + PT V+G L + +ACG H T+
Sbjct: 3287 NGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3322
Score = 354 (129.7 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 92/283 (32%), Positives = 138/283 (48%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
++ WGE DG LG G +RS D P+ +ES ++V +IA GG H+A +T
Sbjct: 4058 LYSWGEAE-DGKLGHG-NRS------PCDR--PRVIESLRGVEVVDIAAGGAHSACITAS 4107
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
GE+++WG+ GRLGHG D PKL++AL+ V VACG + L+ D W
Sbjct: 4108 GELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSW 4167
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 443
+ ++G LG G +P K++ L G+ V V CG + +T +G ++T+G G +
Sbjct: 4168 GDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4226
Query: 444 LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXX 503
LGHG V PR+V L+G + + A G H E G+++TW
Sbjct: 4227 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYTWGDN 4274
Query: 504 XXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
A P VAAL +V+CG + T+A +T+
Sbjct: 4275 DEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4317
Score = 339 (124.4 bits), Expect = 3.4e-22, Sum P(3) = 3.4e-22
Identities = 104/334 (31%), Positives = 158/334 (47%)
Query: 321 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 380
T + +VF WG +LG S + P + L +NV VA G AVT G +Y
Sbjct: 2952 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYA 3011
Query: 381 WGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSC--GPWHTAVVTSAGQLFTFG 437
G + N G LG G + ++ +P++++ L V V+ G H +T G++F++G
Sbjct: 3012 CGEAT-N-GRLGLGLSSGTIPIPRQISA-LSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 3068
Query: 438 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKL 497
+G G LGH R++ PR +++LK R ACG H+AA+ G+L
Sbjct: 3069 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS------------SGEL 3116
Query: 498 FTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGH--SLTVALTTTGHVYTMGSP 555
++W +L P V L+ QV+CG + T+ALT G V++ G
Sbjct: 3117 YSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDG 3176
Query: 556 VYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 614
+G+LG + G +P +E +L V +I CG LT V+TWGKG RLGH
Sbjct: 3177 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3235
Query: 615 G-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
G D R P +VE L+ K++ + G A+
Sbjct: 3236 GTDVHVRK-PQMVEGLRGKKIVHVAVGALHCLAV 3268
Score = 329 (120.9 bits), Expect = 6.2e-23, Sum P(2) = 6.2e-23
Identities = 98/323 (30%), Positives = 156/323 (48%)
Query: 348 PKLIDALKNINVELVAC---GEHHTCAVTLSGDMYTWGGSNC-NFGLLGHGNEMSLWLPK 403
P L+ AL + + +A G+H+ A++++G++++WG C + G LGHG+ L P
Sbjct: 474 PMLVHALTSRKIMKLAAHPDGQHYL-ALSVNGEVFSWG---CGDGGRLGHGDTTYLEEPT 529
Query: 404 KLN---GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS 460
++ G G V ++CG ++A +T+ G+L T+G G +G LGHG +TP V +
Sbjct: 530 MISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTA 589
Query: 461 LKGLRTVRAACGVW--HTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLV 518
LKGL+ + ACG T AV E G++++W +
Sbjct: 590 LKGLKVIDVACGSGDAQTLAVTE------------NGQVWSWGDGDYGKLGRGGSDGCKT 637
Query: 519 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKL 577
P V L + + +V CG +VALT G VYT G +LG + + P ++
Sbjct: 638 PKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQ 697
Query: 578 TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT--DDRNFPSLVEALKDKQVK 635
K V+ IA G H LT EV++WG +N +L H DT ++ P + L K +
Sbjct: 698 GKRVVD-IAVGSTHCLALTEEGEVHSWG--SNDKLQHFDTLFSNKKQPKALPGLNSKHIV 754
Query: 636 SIVCGT--SFTAAICLHKWVSGV 656
I CG SF+ + C +W G+
Sbjct: 755 GISCGPGQSFSWSSC-SEWSVGL 776
Score = 323 (118.8 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 91/308 (29%), Positives = 144/308 (46%)
Query: 290 KMDSFVPKAVESAVVLDVQNIAC--GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 347
K + P V + + +A G+H ++ GEVFSWG GGRLGHG + +
Sbjct: 468 KSTTLAPMLVHALTSRKIMKLAAHPDGQHYLALSVNGEVFSWGCGDGGRLGHGDTTYLEE 527
Query: 348 PKLIDALKN--INVELV--ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK 403
P +I + ++V ACG ++ A+T G+++TWG N +G LGHG+ P
Sbjct: 528 PTMISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGN--YGRLGHGSSEDQTTPM 585
Query: 404 KLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 461
+ L+G+ V V+CG T VT GQ++++GDG +G LG G TP+ V+ L
Sbjct: 586 LVTA-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKL 644
Query: 462 KGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTC 521
+ L V+ CG + A+ + G+++TW E P
Sbjct: 645 QDLDIVKVCCGSQFSVALTK------------DGQVYTWGKGDNQRLGHGTDEHVRYPKL 692
Query: 522 VAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKN 580
+ +L ++ G + +ALT G V++ GS Q D +N K P + G +K+
Sbjct: 693 LDSLQGKRVVDIAVGSTHCLALTEEGEVHSWGSNDKLQHFDTLFSNKKQPKALPGLNSKH 752
Query: 581 FVEEIACG 588
V I+CG
Sbjct: 753 IVG-ISCG 759
Score = 311 (114.5 bits), Expect = 3.6e-36, Sum P(3) = 3.6e-36
Identities = 79/220 (35%), Positives = 113/220 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG C G LG H +Y ++ + + V V +IACG ++A +T
Sbjct: 506 VFSWG-CGDGGRLG---HGDTTY--LEEPTMISVFSGRPVGKQVVHIACGSTYSAAITAD 559
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMYTW 381
GE+ +WG GRLGHG D + P L+ ALK + V VACG + T AVT +G +++W
Sbjct: 560 GELHTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTLAVTENGQVWSW 619
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G + +G LG G PK + L+ + + V CG + +T GQ++T+G G
Sbjct: 620 GDGD--YGKLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDN 676
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
LGHG V P+ +DSL+G R V A G H A+ E
Sbjct: 677 QRLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLALTE 716
Score = 272 (100.8 bits), Expect = 4.2e-15, Sum P(3) = 4.2e-15
Identities = 80/265 (30%), Positives = 116/265 (43%)
Query: 222 GSDGRTGHLKGLSGDTFRVXXXXXXXXXXXXXXXXXXXXXXXVFIWGECTGDGILGGGIH 281
G DG+ GH ++ D R+ + GE G+ G
Sbjct: 3070 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA--ITSSGELYSWGL--GEYG 3125
Query: 282 RSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV--TKQGEVFSWGEELGGRLGH 339
R G G PK V+ + V +ACG R A + T +G VFSWG+ G+LG
Sbjct: 3126 RLGH--GDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGR 3183
Query: 340 GVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL 399
G + P+ I+ L V + CG + A+T SG ++TWG + + LGHG ++ +
Sbjct: 3184 GGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD--YFRLGHGTDVHV 3241
Query: 400 WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD 459
P+ + G L G + V+ G H VT GQ+F +GD G G+G P V
Sbjct: 3242 RKPQMVEG-LRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQ 3300
Query: 460 SLKGLRTVRAACGVWHTAAVVEVMV 484
L+G + R ACG H+ A V V
Sbjct: 3301 GLEGQKITRVACGSSHSVAWTTVDV 3325
Score = 236 (88.1 bits), Expect = 4.9e-32, Sum P(2) = 4.9e-32
Identities = 61/161 (37%), Positives = 88/161 (54%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
V+ WG+ GD G LG R GS G K PK VE LD+ + CG + + +TK
Sbjct: 616 VWSWGD--GDYGKLG----RGGS-DGCK----TPKLVEKLQDLDIVKVCCGSQFSVALTK 664
Query: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G+V++WG+ RLGHG D V +PKL+D+L+ V +A G H A+T G++++WG
Sbjct: 665 DGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWG 724
Query: 383 GSNC--NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 421
++ +F L N+ PK L G L H+ +SCGP
Sbjct: 725 SNDKLQHFDTL-FSNKKQ---PKALPG-LNSKHIVGISCGP 760
Score = 227 (85.0 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 75/291 (25%), Positives = 127/291 (43%)
Query: 375 SGDMYTWGGSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 432
SG +Y WG ++ G LG G ++ + P + L + + G VT+ G+
Sbjct: 3949 SGTIYGWGHNHR--GQLGGIEGAKVKVPTPTEALATLRPVQLIG---GEQTLFAVTADGK 4003
Query: 433 LFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTVRAACGVWHTAAVVEVMVGXXXXX 490
L+ G G G LG G SVSTP ++S++ +R V G H A+
Sbjct: 4004 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLAL----------- 4052
Query: 491 XXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 550
G+L++W + P + +L ++ G + + +T +G +Y
Sbjct: 4053 -SSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELY 4111
Query: 551 TMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGA 608
T G YG+LG + +L ++ L + V ++ACG D LT V++WG G
Sbjct: 4112 TWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 4171
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWVSG 655
G+LG G +D P +++L V + CG+ F+ A+ ++ W G
Sbjct: 4172 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4222
Score = 224 (83.9 bits), Expect = 4.9e-32, Sum P(2) = 4.9e-32
Identities = 84/287 (29%), Positives = 124/287 (43%)
Query: 422 WHTAVVTSAGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
W T +G ++ +G G LG G ++ V TP E +L LR V+ G AV
Sbjct: 3942 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTE--ALATLRPVQLIGGEQTLFAV 3998
Query: 480 VEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAAL--VEPNFCQVSCGH 537
GKL+ E+ PT + ++ V V+ G
Sbjct: 3999 T------------ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGG 4046
Query: 538 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+AL++ G +Y+ G G+LG + RV L V +IA G H A +T+
Sbjct: 4047 KHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA 4106
Query: 598 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH------K 651
E+YTWGKG GRLGHGD++D+ P LVEAL+ +V + CG+ +CL
Sbjct: 4107 SGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWS 4166
Query: 652 WVSG----VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 694
W G + + GC++P K + G+V C S+ SV
Sbjct: 4167 WGDGDYGKLGRGGSDGCKVPM----KIDSLTGLGVVKVE-CGSQFSV 4208
Score = 201 (75.8 bits), Expect = 3.6e-36, Sum P(3) = 3.6e-36
Identities = 52/151 (34%), Positives = 72/151 (47%)
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKLTKNFVEEIACGDYH 591
V G +ALT G V++ G G+LG + N P +E TK + +IACG H
Sbjct: 3048 VHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR-IRDIACGSSH 3106
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL-- 649
A +TS E+Y+WG G GRLGHGD + P LV+ L +V + CG+ + L
Sbjct: 3107 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTD 3166
Query: 650 ----HKWVSG----VDQSMCSGCRIPFNFKR 672
W G + + GC IP N +R
Sbjct: 3167 EGMVFSWGDGDFGKLGRGGSEGCNIPQNIER 3197
Score = 149 (57.5 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 47/146 (32%), Positives = 64/146 (43%)
Query: 519 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLT 578
P AL Q+ C + LT TG VYT Y K+ P V +
Sbjct: 432 PIQCKALSNLGVTQIVCSEKGFLILTITGAVYTQN---Y------KSTTLAPMLVHALTS 482
Query: 579 KNFVEEIACGD-YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKD----KQ 633
+ ++ A D H L+ EV++WG G GRLGHGDT P+++ KQ
Sbjct: 483 RKIMKLAAHPDGQHYLALSVNGEVFSWGCGDGGRLGHGDTTYLEEPTMISVFSGRPVGKQ 542
Query: 634 VKSIVCGTSFTAAIC----LHKWVSG 655
V I CG++++AAI LH W G
Sbjct: 543 VVHIACGSTYSAAITADGELHTWGRG 568
Score = 112 (44.5 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 43/160 (26%), Positives = 69/160 (43%)
Query: 325 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 384
EV WG LG ++V+ P AL N+ V + C E +T++G +YT
Sbjct: 414 EVIGWG-----LLGWKPYANVNGPIQCKALSNLGVTQIVCSEKGFLILTITGAVYTQNYK 468
Query: 385 NCNFG-LLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV 443
+ +L H ++ KL +G H ++S G++F++G G G
Sbjct: 469 STTLAPMLVHA--LTSRKIMKLAAHPDGQHYLALSVN----------GEVFSWGCGDGGR 516
Query: 444 LGHGDRISVSTPREVDSLKGL----RTVRAACGVWHTAAV 479
LGHGD + P + G + V ACG ++AA+
Sbjct: 517 LGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAI 556
Score = 88 (36.0 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 33/113 (29%), Positives = 50/113 (44%)
Query: 539 LTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
L A T V+ G QLG K + K+P+ E N V+ +A G + +T+
Sbjct: 2947 LESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ-VAGGSKSLFAVTA 3005
Query: 598 RTEVYTWGKGANGRLGHG-DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 649
+VY G+ NGRLG G + P + AL + VK + + A+ L
Sbjct: 3006 EGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMAL 3058
Score = 42 (19.8 bits), Expect = 3.6e-36, Sum P(3) = 3.6e-36
Identities = 25/79 (31%), Positives = 36/79 (45%)
Query: 898 KEALAVAGEETAKCRAAKDVIKSLTAQL-KD--MAEMLPVGAVRNSNSFHSSPTPAWDVS 954
K L++ G AK +A V+ SL +D + ++P + SSP P D S
Sbjct: 3378 KILLSLDGN-LAKQQALSHVLSSLQIMYARDAVVGALMP-SCMMPLECPSSSPVPPSDCS 3435
Query: 955 SAAIEQPSSPLTFQG-AIP 972
SA SSP +G A+P
Sbjct: 3436 SA-----SSPCEAEGPALP 3449
Score = 41 (19.5 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 10/39 (25%), Positives = 15/39 (38%)
Query: 344 DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
D+ K K I+ + + H C TL D+ G
Sbjct: 948 DIEAKKEAQKEKEIDEQEASASSLHRCRTTLDKDLINTG 986
Score = 37 (18.1 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 61 HLKLSHVSRIIPGQRTPIFQRYPRPEKEYQSFSLI--YNDRSLDLICKDKDEAEVWFTGL 118
H+K+ R+ P TP +Y ++S ++ ++ D+I D + W TGL
Sbjct: 2634 HIKIGDKVRVKPSVTTP---KYKWGSVTHRSVGVVKAFSANGKDVIV-DFPQQSHW-TGL 2688
Score = 37 (18.1 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 903 VAGEETAKCRAAKDVIKSLTAQLKDM 928
+AG + K R K + + LTA D+
Sbjct: 2283 LAGSKLEKQRMKKSLSRGLTADQVDV 2308
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 455 (165.2 bits), Expect = 3.6e-34, Sum P(3) = 3.6e-34
Identities = 131/385 (34%), Positives = 189/385 (49%)
Query: 268 GECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVF 327
G+C D L G R G A + VP A S Q + CG ++ G V
Sbjct: 3995 GKC--DVYLWGA-GRHGQLAEAGRNVMVPVAAPS--FSQAQQVVCGQNCTFVIQANGTVL 4049
Query: 328 SWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMYTWGGS 384
+ GE GRLG G D+ +I AL+ V +LV +CG + H+ A+T SG++++WG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 444
+ +G LGHGN P+++ L+G V +SCG H+AVVT+ G+LFTFG+G +G L
Sbjct: 4110 D--YGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRL 4166
Query: 445 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXX 504
G G+ + P V +L+G + + ACG+ HT AV GKL
Sbjct: 4167 GLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKL------- 4219
Query: 505 XXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 564
A+ P V L +V+CG +VALT GHVYT G +G P+
Sbjct: 4220 ----GLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPE 4275
Query: 565 A---NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 621
N P +V L+ F+E+IA G H L+S +VY WG + G+LG G T+
Sbjct: 4276 GRARNHNRPQQVP-VLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVR 4334
Query: 622 FPSLVEALKDKQVKSIVCGTSFTAA 646
P+L+ L+ K ++ I G +AA
Sbjct: 4335 EPTLITVLQGKNIRQISAGRCHSAA 4359
Score = 361 (132.1 bits), Expect = 4.9e-26, Sum P(2) = 4.9e-26
Identities = 106/347 (30%), Positives = 160/347 (46%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 365
D Q I G +++ G V + G+ GRLG G ++ S K + + +++ V+
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 366 ---EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 422
+ HT A T G++++WG + +G LGHGN + PK + GPL+G V VS G
Sbjct: 464 KGSDGHTLAFTTEGEVFSWGDGD--YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYR 521
Query: 423 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 482
H+A VT G+L+T+G+G FG LGHGD S + P V + + V +CG HT A+ +
Sbjct: 522 HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK- 578
Query: 483 MVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLV--PTCVAALVEPNFCQVSCGHSLT 540
G+ W + V P + AL +V G +
Sbjct: 579 -----------DGRT-VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS 626
Query: 541 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 600
+ALT+TG VY G G +A P +E +L + +I+ GD H L+ E
Sbjct: 627 LALTSTGQVYAWGCGACLGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNE 685
Query: 601 VYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
VY WG + G+ G G+ T P V L ++ I GTS + A
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLA 732
Score = 357 (130.7 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 98/306 (32%), Positives = 153/306 (50%)
Query: 295 VPKAVESAVVLDVQNIACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 353
V A++ VV + +CG H+ +T+ GEVFSWG+ G+LGHG P+ I+A
Sbjct: 4072 VISALQGFVVTQLVT-SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA 4130
Query: 354 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 413
L+ V ++CG H+ VT G ++T+G N ++G LG GN + LP+++ LEG
Sbjct: 4131 LQGEEVVQMSCGFKHSAVVTADGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQ 4187
Query: 414 VSSVSCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
+ V+CG HT V++ G + + FGDG +G LG G+ + S+P++VD L G+ + ACG
Sbjct: 4188 IGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACG 4247
Query: 473 VWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQ 532
+ A+ + G +L + VP +E
Sbjct: 4248 TQFSVALTKD--GHVYTFGQVSDRLI----GLPEGRARNHNRPQQVPVLSGVFIE----D 4297
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYH 591
++ G T+AL++TG VY GS GQLG N + PT + KN + +I+ G H
Sbjct: 4298 IAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKN-IRQISAGRCH 4356
Query: 592 VAVLTS 597
A T+
Sbjct: 4357 SAAWTA 4362
Score = 316 (116.3 bits), Expect = 5.1e-21, Sum P(2) = 5.1e-21
Identities = 98/336 (29%), Positives = 152/336 (45%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 376
A +V++ EV+ WG +L G + PKL + + + + G++ T ++ G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSD--AQTIEAGQYCTFVISTDG 422
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIH-VSSVSCGPWHTAVVTSAGQLF 434
+ G + +G LG G+ + KKL P I VSS HT T+ G++F
Sbjct: 423 SVRACGKGS--YGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 435 TFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXX 493
++GDG +G LGHG+ + P+ + L+G V + G H+AAV E
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------------ 528
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTM 552
G+L+TW +R +PT V + N +VSCG S T+AL+ G V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSF 586
Query: 553 GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 612
G G+LG N +V L F+ ++ G LTS +VY WG GA L
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--L 644
Query: 613 GHGDTDDRNF-PSLVEALKDKQVKSIVCGTSFTAAI 647
G G ++ P L+E L ++ I G S A+
Sbjct: 645 GCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL 680
Score = 248 (92.4 bits), Expect = 2.8e-11, Sum P(4) = 2.8e-11
Identities = 76/276 (27%), Positives = 126/276 (45%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
D+Y WG G L ++ +P + P V CG T V+ + G +
Sbjct: 3998 DVYLWGAGR--HGQLAEAGR-NVMVP--VAAPSFS-QAQQVVCGQNCTFVIQANGTVLAC 4051
Query: 437 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVR--AACGV-WHTAAVVEVMVGXXXXXXXX 493
G+G++G LG G+ + + +L+G + +CG H+ A+ E
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4099
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 553
G++F+W + + P + AL Q+SCG + +T G ++T G
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFG 4159
Query: 554 SPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGR 611
+ YG+LG +N KLP RV L + ++ACG H VAV T + V+ +G G G+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGK 4218
Query: 612 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
LG G++ ++ P V+ L +K + CGT F+ A+
Sbjct: 4219 LGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 4254
Score = 238 (88.8 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 80/296 (27%), Positives = 138/296 (46%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
++Y WG SN + L+ G + + PK P ++ G + T V+++ G +
Sbjct: 373 EVYVWG-SNSSHQLV-EGTQEKILQPKL--APSFS-DAQTIEAGQYCTFVISTDGSVRAC 427
Query: 437 GDGTFGVLGHGDRISVSTPREV--DSLKGLRTVRAACGV-WHTAAVVEVMVGXXXXXXXX 493
G G++G LG GD + ST +++ + + ++ V ++ G HT A
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT------------T 475
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNF--CQVSCGHSLTVALTTTGHVYT 551
G++F+W + P + ++ C VS G+ + A+T G +YT
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGELYT 534
Query: 552 MGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVYTWGKGA 608
G +G+LG +N + +PT V K N V E++CG H L+ RT V+++G G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VWSFGGGD 590
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGC 664
NG+LGHGDT+ P ++EAL+ ++ + G+ + A+ V C GC
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGC 646
Score = 231 (86.4 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 62/218 (28%), Positives = 107/218 (49%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
++ WGE GD G LG G S + +P V+ + +V ++CG H ++K
Sbjct: 532 LYTWGE--GDFGRLGHGDSNSRN---------IPTLVKD--ISNVGEVSCGSSHTIALSK 578
Query: 323 QGE-VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 381
G V+S+G G+LGHG + V PK+I+AL+ + + V G + A+T +G +Y W
Sbjct: 579 DGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G C LG G+ + L KL L + +S G H ++ +++ +G+ +
Sbjct: 639 GCGAC----LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Query: 442 GVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAA 478
G G G+ ++ P++V L G+ + + G H+ A
Sbjct: 695 GQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLA 732
Score = 177 (67.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 39/138 (28%), Positives = 73/138 (52%)
Query: 294 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 352
+ PK +E+ + ++ + G + + +T G+V++WG G LG G ++ PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 411
L + ++ G+ H A++ ++Y WG N + G G GN + PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717
Query: 412 IHVSSVSCGPWHTAVVTS 429
+ + +S G H+ T+
Sbjct: 718 VSIQQISAGTSHSLAWTA 735
Score = 74 (31.1 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 589 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
D+H L + +VY WG G +G+L RN V A Q + +VCG + T I
Sbjct: 3990 DWH---LGGKCDVYLWGAGRHGQLAEAG---RNVMVPVAAPSFSQAQQVVCGQNCTFVI 4042
Score = 42 (19.8 bits), Expect = 2.8e-11, Sum P(4) = 2.8e-11
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 352 DALKNINVELVACG-EHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
D +N+ ++ V+ E C + +G + T G +GL G
Sbjct: 2023 DEDENLPIQEVSFDPEKAQCCIVENGQILTHGSGGKGYGLASTG 2066
Score = 39 (18.8 bits), Expect = 4.9e-26, Sum P(2) = 4.9e-26
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 651 KWVSGVDQSMCS 662
KW++G+D+ + S
Sbjct: 3971 KWINGMDEQIMS 3982
Score = 37 (18.1 bits), Expect = 3.6e-34, Sum P(3) = 3.6e-34
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 625 LVEALKDKQVKSIVCG 640
L+ L KQ++ +VCG
Sbjct: 4716 LLSLLTAKQLEQMVCG 4731
Score = 37 (18.1 bits), Expect = 3.6e-34, Sum P(3) = 3.6e-34
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 43 RLANDESILIWISGKEEK 60
RL IL+ +SG EEK
Sbjct: 1637 RLEALHQILVLLSGMEEK 1654
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 404 (147.3 bits), Expect = 5.4e-34, P = 5.4e-34
Identities = 116/363 (31%), Positives = 181/363 (49%)
Query: 270 CTGDGILGG-GIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFS 328
C G LG GI S + G+ + V + V ++ +ACGG H+ + + GEV++
Sbjct: 3 CWGYWSLGQPGI--SSNLQGIVAEPQVCRFVSDR---SIKEVACGGNHSVFLLEDGEVYT 57
Query: 329 WGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCN 387
G G+LGH + + + P+ I AL + ++ VACGE H+ A++ G +++WG GS+
Sbjct: 58 CGVNTKGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
GL+ E S+ +P+ + L + VSCG WH + + GQ FT+G + G LG G
Sbjct: 116 LGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Query: 448 DRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXX 506
S ++P+ V SL+G+ + A G H+ A+ G +F W
Sbjct: 173 KEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL------------SLSGAVFGWGMNNAG 220
Query: 507 XXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN 566
++ R P V L +SCG T LT +G V+T G+ GQLG N
Sbjct: 221 QLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVN 280
Query: 567 GKL-PTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 624
++ P RV +L + V +IACG H +A++ S +Y +G GA G+LG G T + PS
Sbjct: 281 DEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPS 339
Query: 625 LVE 627
V+
Sbjct: 340 PVK 342
Score = 320 (117.7 bits), Expect = 7.1e-25, P = 7.1e-25
Identities = 97/324 (29%), Positives = 155/324 (47%)
Query: 329 WGEELGGRLG--HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
WG G+ G + V+ P++ + + +++ VACG +H+ + G++YT G N
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCG-VNT 62
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG- 445
G LGH E + P+++ G L H+ V+CG H+ ++ GQLF++G G+ G LG
Sbjct: 63 K-GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 446 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXX 505
SV+ PR + L ++ +CG WH A+ G+ FTW
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSH 166
Query: 506 XXXXXXXK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DP 563
+ ++ P V +L QV+ G + + AL+ +G V+ G GQLG
Sbjct: 167 GQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 564 KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 623
+ + + P V+ T+ V I+CG+ H AVLT V+T+G G+ G+LGH +D P
Sbjct: 227 EKDRESPCHVKLLRTQKVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP 285
Query: 624 SLVEALKDKQVKSIVCGTSFTAAI 647
V L +V I CG T A+
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAL 309
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 403 (146.9 bits), Expect = 9.6e-34, P = 9.6e-34
Identities = 108/325 (33%), Positives = 166/325 (51%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V+ +ACGG H+ + + GEV++ G G+LGH + + + P+ I AL + ++ VACGE
Sbjct: 36 VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADEHIVHVACGE 93
Query: 367 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 425
H+ A++ G +++WG GS+ GL+ E S+ +P+ + L + VSCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMT--TEESVAVPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 426 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
+ + GQ FT+G + G LG G S ++P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 485 GXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 544
G +F W +E R P V L +SCG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLT 258
Query: 545 TTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVY 602
+G V+T G+ GQLG N ++ P RV +L + V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 603 TWGKGANGRLGHGDTDDRNFPSLVE 627
+G GA G+LG G T + PS V+
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 315 (115.9 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 98/323 (30%), Positives = 152/323 (47%)
Query: 329 WGEELGGRLGHGVDSD--VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
WG G+ G + V+ P++ + + +V+ VACG H+ + G++YT G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCG-LNT 62
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG- 445
G LGH E + P+++ G L H+ V+CG H+ ++ GQLF++G G+ G LG
Sbjct: 63 K-GQLGHEREGNK--PEQI-GALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 446 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXX 505
SV+ PR + L ++ +CG WH A+ G+ FTW
Sbjct: 119 MTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSH 166
Query: 506 XXXXXXXK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DP 563
+ ++ P V +L QV+ G + + AL+ +G V+ G GQLG
Sbjct: 167 GQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 564 KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 623
+ + + P V+ L V I+CG+ H AVLT V+T+G G+ G+LGH +D P
Sbjct: 227 EEDRESPCHVK-LLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 624 SLVEALKDKQVKSIVCGTSFTAA 646
V L +V I CG T A
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLA 308
Score = 292 (107.8 bits), Expect = 9.7e-22, P = 9.7e-22
Identities = 83/301 (27%), Positives = 139/301 (46%)
Query: 279 GIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG 338
G++ G G + + P+ + + + ++ACG H+ ++ +G++FSWG G+LG
Sbjct: 59 GLNTKGQL-GHEREGNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG 117
Query: 339 -HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM 397
+ V+ P+LI L + V+CG H A+ G +TWG ++ G LG G E
Sbjct: 118 LMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS--HGQLGLGKEF 175
Query: 398 -SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPR 456
S P+++ LEGI ++ V+ G H+ ++ +G +F +G G LG D +P
Sbjct: 176 PSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 457 EVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEAR 516
V L+ + V +CG HTA + + G +FT+
Sbjct: 235 HVKLLRAQKVVYISCGEEHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDE 282
Query: 517 LVPTCVAALVEPNFCQVSCGHSLTVALT-TTGHVYTMGSPVYGQLGDPKA-NGKLPTRVE 574
+ P V L+ Q++CG T+A ++G +Y G GQLG N K P+ V+
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Query: 575 G 575
G
Sbjct: 343 G 343
Score = 237 (88.5 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 71/237 (29%), Positives = 108/237 (45%)
Query: 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 473
V V+CG H+ + G+++T G T G LGH +R + P ++ +L V ACG
Sbjct: 36 VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGH-EREG-NKPEQIGALADEHIVHVACGE 93
Query: 474 WHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXX-XXKEARLVPTCVAALVEPNFCQ 532
H+ A+ + G+LF+W +E+ VP + L + Q
Sbjct: 94 SHSLALSD------------RGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQ 141
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA--NGKLPTRVEGKLTKNFVEEIACGDY 590
VSCG+ +AL G +T G +GQLG K + P RV L + ++A G
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGA 200
Query: 591 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
H L+ V+ WG G+LG D +DR P V+ L+ ++V I CG TA +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVL 257
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 449 (163.1 bits), Expect = 1.0e-33, Sum P(3) = 1.0e-33
Identities = 131/383 (34%), Positives = 186/383 (48%)
Query: 268 GECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVF 327
G+C D L G R G A + VP A S Q + CG ++ G V
Sbjct: 3990 GKC--DVYLWGA-GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQANGTVL 4044
Query: 328 SWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMYTWGGS 384
+ GE GRLG G D+ +I AL+ V +LV +CG + H+ A+T SG++++WG
Sbjct: 4045 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4104
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 444
+ +G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G +G L
Sbjct: 4105 D--YGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL 4161
Query: 445 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXX 504
G G+ + P V +L+G + + ACG+ HT AV GKL
Sbjct: 4162 GLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL------- 4214
Query: 505 XXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 564
A+ P V L +V+CG +VALT GHVYT G L + +
Sbjct: 4215 ----GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGR 4270
Query: 565 A-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 623
A N P ++ L +E++A G H L S +VY WG + G+LG G T+ P
Sbjct: 4271 ARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREP 4329
Query: 624 SLVEALKDKQVKSIVCGTSFTAA 646
+LV L+ K V+ I G +AA
Sbjct: 4330 TLVTVLQGKNVRQISAGRCHSAA 4352
Score = 359 (131.4 bits), Expect = 3.2e-24, Sum P(3) = 3.2e-24
Identities = 106/347 (30%), Positives = 160/347 (46%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 365
D Q I G +++ G V + G+ GRLG G ++ S K + + +++ V+
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 366 ---EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 422
+ HT A T G++++WG + +G LGHGN + PK + GPL+G V VS G
Sbjct: 464 KGSDGHTLAFTTEGEVFSWGDGD--YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYR 521
Query: 423 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 482
H+A VT G+L+T+G+G FG LGHGD S + P V + + V +CG HT A+ +
Sbjct: 522 HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK- 578
Query: 483 MVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLV--PTCVAALVEPNFCQVSCGHSLT 540
G+ W + V P + AL +V G +
Sbjct: 579 -----------DGRT-VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS 626
Query: 541 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 600
+ALT+TG VY G G +A P +E +L + +I+ GD H L+ E
Sbjct: 627 LALTSTGQVYAWGCGACLGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNE 685
Query: 601 VYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
VY WG + G+ G G+ T P V L ++ I GTS + A
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 352 (129.0 bits), Expect = 2.9e-23, Sum P(3) = 2.9e-23
Identities = 100/306 (32%), Positives = 152/306 (49%)
Query: 295 VPKAVESAVVLDVQNIACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 353
V A++ VV + +CG H+ +T+ GEVFSWG+ G+LGHG P+ I+A
Sbjct: 4067 VISALQGFVVTQLVT-SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA 4125
Query: 354 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 413
L+ V ++CG H+ VT G ++T+G N ++G LG GN + LP+++ LEG
Sbjct: 4126 LQGEEVVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQ 4182
Query: 414 VSSVSCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
+ V+CG HT V++ G + + FGDG +G LG G+ + S+P++VD L G+ + ACG
Sbjct: 4183 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACG 4242
Query: 473 VWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQ 532
+ A+ + G ++T+ P + L
Sbjct: 4243 TQFSVALTK------------DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIED 4290
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYH 591
V+ G T+AL +TG VY GS GQLG N + PT V KN V +I+ G H
Sbjct: 4291 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKN-VRQISAGRCH 4349
Query: 592 VAVLTS 597
A T+
Sbjct: 4350 SAAWTA 4355
Score = 313 (115.2 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 97/334 (29%), Positives = 151/334 (45%)
Query: 319 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM 378
+V++ EV+ WG +L G + PKL + + + + G++ T ++ G +
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSD--AQTIEAGQYCTFVISTDGSV 424
Query: 379 YTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIH-VSSVSCGPWHTAVVTSAGQLFTF 436
G + +G LG G+ + KKL P I VSS HT T+ G++F++
Sbjct: 425 RACGKGS--YGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 437 GDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXG 495
GDG +G LGHG+ + P+ + L+G V + G H+AAV E G
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------------DG 530
Query: 496 KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTMGS 554
+L+TW +R +PT V + N +VSCG S T+AL+ G V++ G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 555 PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 614
G+LG N +V L F+ ++ G LTS +VY WG GA LG
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGC 646
Query: 615 GDTDDRNF-PSLVEALKDKQVKSIVCGTSFTAAI 647
G ++ P L+E L ++ I G S A+
Sbjct: 647 GSSEATALRPKLIEELAATRIVDISIGDSHCLAL 680
Score = 297 (109.6 bits), Expect = 2.0e-17, Sum P(3) = 2.0e-17
Identities = 90/328 (27%), Positives = 151/328 (46%)
Query: 325 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 384
+V+ WG G+L +V P + + V CG++ T + +G + G
Sbjct: 3993 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEG 4049
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGDGTF 441
+ +G LG GN L + ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4050 S--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4106
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
G LGHG+ PR++++L+G V+ +CG H+A V GKLFT+
Sbjct: 4107 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS------------DGKLFTFG 4154
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTMGSPVYGQL 560
+ +P V AL QV+CG + T+A++ G V+ G YG+L
Sbjct: 4155 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4214
Query: 561 GDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 619
G + K P +V+ L ++++ACG LT VYT+G+ L G +
Sbjct: 4215 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4273
Query: 620 RNFPSLVEALKDKQVKSIVCGTSFTAAI 647
N P + L ++ + G T A+
Sbjct: 4274 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4301
Score = 244 (91.0 bits), Expect = 5.7e-11, Sum P(4) = 5.7e-11
Identities = 77/289 (26%), Positives = 130/289 (44%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
D+Y WG G L ++ +P P V CG T V+ + G +
Sbjct: 3993 DVYLWGAGR--HGQLAEAGR-NVMVPAA--APSFS-QAQQVICGQNCTFVIQANGTVLAC 4046
Query: 437 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVR--AACGV-WHTAAVVEVMVGXXXXXXXX 493
G+G++G LG G+ + + +L+G + +CG H+ A+ E
Sbjct: 4047 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4094
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 553
G++F+W + + P + AL Q+SCG + +T+ G ++T G
Sbjct: 4095 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4154
Query: 554 SPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGR 611
+ YG+LG +N KLP RV L + ++ACG H +AV + V+ +G G G+
Sbjct: 4155 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4213
Query: 612 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL--HKWVSGVDQ 658
LG G++ ++ P V+ L +K + CGT F+ A+ H + G D+
Sbjct: 4214 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4262
Score = 239 (89.2 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 82/304 (26%), Positives = 142/304 (46%)
Query: 369 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 428
T V+ + ++Y WG SN + L+ G + + PK P ++ G + T V++
Sbjct: 365 TPIVSETCEVYVWG-SNSSHQLV-EGTQEKILQPKL--APSFS-DAQTIEAGQYCTFVIS 419
Query: 429 SAGQLFTFGDGTFGVLGHGDRISVSTPREV--DSLKGLRTVRAACGV-WHTAAVVEVMVG 485
+ G + G G++G LG GD + ST +++ + + ++ V ++ G HT A
Sbjct: 420 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT----- 474
Query: 486 XXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNF--CQVSCGHSLTVAL 543
G++F+W + P + ++ C VS G+ + A+
Sbjct: 475 -------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAV 526
Query: 544 TTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTE 600
T G +YT G +G+LG +N + +PT V K N V E++CG H L+ RT
Sbjct: 527 TEDGELYTWGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT- 582
Query: 601 VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 660
V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+ V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Query: 661 CSGC 664
C GC
Sbjct: 643 CLGC 646
Score = 232 (86.7 bits), Expect = 7.5e-14, Sum P(3) = 7.5e-14
Identities = 62/218 (28%), Positives = 107/218 (49%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
++ WGE GD G LG G S + +P V+ + +V ++CG H ++K
Sbjct: 532 LYTWGE--GDFGRLGHGDSNSRN---------IPTLVKD--ISNVGEVSCGSSHTIALSK 578
Query: 323 QGE-VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 381
G V+S+G G+LGHG + V PK+I+AL+ + + V G + A+T +G +Y W
Sbjct: 579 DGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G C LG G+ + L KL L + +S G H ++ +++ +G+ +
Sbjct: 639 GCGAC----LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Query: 442 GVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAA 478
G G G+ ++ P++V L G+ + + G H+ A
Sbjct: 695 GQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 177 (67.4 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 40/138 (28%), Positives = 73/138 (52%)
Query: 294 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 352
+ PK +E+ + ++ + G + + +T G+V++WG G LG G ++ PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 411
L + ++ G+ H A++ ++Y WG N + G G GN + PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717
Query: 412 IHVSSVSCGPWHTAVVTS 429
I + +S G H+ T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735
Score = 69 (29.3 bits), Expect = 7.5e-14, Sum P(3) = 7.5e-14
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 589 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
D+H L + +VY WG G +G+L RN A Q + ++CG + T I
Sbjct: 3985 DWH---LGGKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVI 4037
Score = 41 (19.5 bits), Expect = 5.7e-11, Sum P(4) = 5.7e-11
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 355 KNINVELVACG-EHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
+N+ ++ V+ E C + +G + T G +GL G
Sbjct: 2023 ENLPIQEVSFDPEKAQCCIVENGQILTHGSGGKGYGLASTG 2063
Score = 39 (18.8 bits), Expect = 1.0e-33, Sum P(3) = 1.0e-33
Identities = 17/73 (23%), Positives = 32/73 (43%)
Query: 1019 DEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMV 1078
D +V Q G + ++ PGG + +RK++ E+ E Y + +
Sbjct: 4647 DSFVGQSADGKMVPII--PGG-NSIPLTFSNRKEYVERAIE-------------YRLHEM 4690
Query: 1079 DKSSVSIGREGLA 1091
D+ V+ REG++
Sbjct: 4691 DRQQVAAVREGMS 4703
Score = 39 (18.8 bits), Expect = 3.2e-24, Sum P(3) = 3.2e-24
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 651 KWVSGVDQSMCS 662
KW++G+D+ + S
Sbjct: 3966 KWINGMDEQIMS 3977
Score = 37 (18.1 bits), Expect = 1.0e-33, Sum P(3) = 1.0e-33
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 43 RLANDESILIWISGKEEK 60
RL IL+ +SG EEK
Sbjct: 1637 RLEALHQILVLLSGMEEK 1654
Score = 37 (18.1 bits), Expect = 1.6e-33, Sum P(3) = 1.6e-33
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 625 LVEALKDKQVKSIVCG 640
L+ L KQ++ +VCG
Sbjct: 4710 LLSLLTAKQLEQMVCG 4725
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 448 (162.8 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 130/383 (33%), Positives = 186/383 (48%)
Query: 268 GECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVF 327
G+C D L G R G A + VP A S Q + CG ++ G V
Sbjct: 3252 GKC--DVYLWGA-GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQANGTVL 3306
Query: 328 SWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMYTWGGS 384
+ GE GRLG G D+ +I AL+ V +LV +CG + H+ A+T SG++++WG
Sbjct: 3307 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 3366
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 444
+ +G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G +G L
Sbjct: 3367 D--YGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL 3423
Query: 445 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXX 504
G G+ + P V +L+G + + ACG+ HT AV GKL
Sbjct: 3424 GLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL------- 3476
Query: 505 XXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 564
A+ P V L +V+CG +VALT GHVYT G L + +
Sbjct: 3477 ----GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGR 3532
Query: 565 A-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 623
A N P ++ L +E++A G H L S +VY WG + G+LG G T+ P
Sbjct: 3533 ARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREP 3591
Query: 624 SLVEALKDKQVKSIVCGTSFTAA 646
+LV L+ K ++ I G +AA
Sbjct: 3592 TLVTVLQGKNIRQISAGRCHSAA 3614
Score = 351 (128.6 bits), Expect = 3.4e-23, Sum P(3) = 3.4e-23
Identities = 99/306 (32%), Positives = 152/306 (49%)
Query: 295 VPKAVESAVVLDVQNIACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 353
V A++ VV + +CG H+ +T+ GEVFSWG+ G+LGHG P+ I+A
Sbjct: 3329 VISALQGFVVTQLVT-SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA 3387
Query: 354 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 413
L+ V ++CG H+ VT G ++T+G N ++G LG GN + LP+++ LEG
Sbjct: 3388 LQGEEVVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQ 3444
Query: 414 VSSVSCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
+ V+CG HT V++ G + + FGDG +G LG G+ + S+P++VD L G+ + ACG
Sbjct: 3445 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACG 3504
Query: 473 VWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQ 532
+ A+ + G ++T+ P + L
Sbjct: 3505 TQFSVALTK------------DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIED 3552
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYH 591
V+ G T+AL +TG VY GS GQLG N + PT V KN + +I+ G H
Sbjct: 3553 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKN-IRQISAGRCH 3611
Query: 592 VAVLTS 597
A T+
Sbjct: 3612 SAAWTA 3617
Score = 297 (109.6 bits), Expect = 1.9e-17, Sum P(3) = 1.9e-17
Identities = 90/328 (27%), Positives = 151/328 (46%)
Query: 325 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 384
+V+ WG G+L +V P + + V CG++ T + +G + G
Sbjct: 3255 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEG 3311
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGDGTF 441
+ +G LG GN L + ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 3312 S--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3368
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
G LGHG+ PR++++L+G V+ +CG H+A V GKLFT+
Sbjct: 3369 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS------------DGKLFTFG 3416
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTMGSPVYGQL 560
+ +P V AL QV+CG + T+A++ G V+ G YG+L
Sbjct: 3417 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 3476
Query: 561 GDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 619
G + K P +V+ L ++++ACG LT VYT+G+ L G +
Sbjct: 3477 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 3535
Query: 620 RNFPSLVEALKDKQVKSIVCGTSFTAAI 647
N P + L ++ + G T A+
Sbjct: 3536 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 3563
Score = 244 (91.0 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 77/289 (26%), Positives = 130/289 (44%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
D+Y WG G L ++ +P P V CG T V+ + G +
Sbjct: 3255 DVYLWGAGR--HGQLAEAGR-NVMVPAA--APSFS-QAQQVICGQNCTFVIQANGTVLAC 3308
Query: 437 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVR--AACGV-WHTAAVVEVMVGXXXXXXXX 493
G+G++G LG G+ + + +L+G + +CG H+ A+ E
Sbjct: 3309 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 3356
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 553
G++F+W + + P + AL Q+SCG + +T+ G ++T G
Sbjct: 3357 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 3416
Query: 554 SPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGR 611
+ YG+LG +N KLP RV L + ++ACG H +AV + V+ +G G G+
Sbjct: 3417 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 3475
Query: 612 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL--HKWVSGVDQ 658
LG G++ ++ P V+ L +K + CGT F+ A+ H + G D+
Sbjct: 3476 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 3524
Score = 52 (23.4 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 335 GRLGHGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVT 373
G+ G G + ++ PK + L I ++ ++ G H+ A T
Sbjct: 2 GQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 41
Score = 37 (18.1 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 625 LVEALKDKQVKSIVCG 640
L+ L KQ++ +VCG
Sbjct: 3971 LLSLLTAKQLEQMVCG 3986
Score = 37 (18.1 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 43 RLANDESILIWISGKEEK 60
RL IL+ +SG EEK
Sbjct: 944 RLEALHQILVLLSGMEEK 961
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 450 (163.5 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 130/383 (33%), Positives = 186/383 (48%)
Query: 268 GECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVF 327
G+C D L G R G A + VP A S Q + CG ++ G V
Sbjct: 3995 GKC--DVYLWGA-GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQANGTVL 4049
Query: 328 SWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMYTWGGS 384
+ GE GRLG G D+ +I AL+ V +LV +CG + H+ A+T SG++++WG
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 444
+ +G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G +G L
Sbjct: 4110 D--YGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL 4166
Query: 445 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXX 504
G G+ + P V +L+G + + ACG+ HT AV GKL
Sbjct: 4167 GLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL------- 4219
Query: 505 XXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 564
A+ P + L +V+CG +VALT GHVYT G L + +
Sbjct: 4220 ----GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGR 4275
Query: 565 A-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 623
A N P ++ L +E++A G H L S +VY WG + G+LG G T+ P
Sbjct: 4276 ARNHNRPQQIP-VLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREP 4334
Query: 624 SLVEALKDKQVKSIVCGTSFTAA 646
+LV L+ K V+ I G +AA
Sbjct: 4335 TLVTGLQGKNVRQISAGRCHSAA 4357
Score = 358 (131.1 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 105/347 (30%), Positives = 160/347 (46%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 365
D Q I G +++ G V + G+ GRLG G ++ S K + + +++ V+
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 366 ---EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 422
+ HT A T G++++WG + +G LGHGN + PK + GPL+G V VS G
Sbjct: 464 KGSDGHTLAFTTEGEVFSWGDGD--YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYR 521
Query: 423 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 482
H+A VT G+L+T+G+G FG LGHGD S + P V + + V +CG HT A+ +
Sbjct: 522 HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK- 578
Query: 483 MVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLV--PTCVAALVEPNFCQVSCGHSLT 540
G+ W + V P + AL +V G +
Sbjct: 579 -----------DGRT-VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS 626
Query: 541 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 600
+ALT+TG VY G G +A P +E +L + +++ GD H L+ E
Sbjct: 627 LALTSTGQVYAWGCGACLGCGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNE 685
Query: 601 VYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
VY WG + G+ G G+ T P V L ++ I GTS + A
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 355 (130.0 bits), Expect = 2.2e-23, Sum P(3) = 2.2e-23
Identities = 99/306 (32%), Positives = 152/306 (49%)
Query: 295 VPKAVESAVVLDVQNIACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 353
V A++ VV + +CG H+ +T+ GEVFSWG+ G+LGHG P+ I+A
Sbjct: 4072 VISALQGFVVTQLVT-SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA 4130
Query: 354 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 413
L+ V ++CG H+ VT G ++T+G N ++G LG GN + LP+++ LEG
Sbjct: 4131 LQGEEVVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQ 4187
Query: 414 VSSVSCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
+ V+CG HT V++ G + + FGDG +G LG G+ + S+P+++D L G+ + ACG
Sbjct: 4188 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACG 4247
Query: 473 VWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQ 532
+ A+ + G ++T+ P + L
Sbjct: 4248 TQFSVALTK------------DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIED 4295
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYH 591
V+ G T+AL + G VY GS GQLG N + PT V G KN V +I+ G H
Sbjct: 4296 VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKN-VRQISAGRCH 4354
Query: 592 VAVLTS 597
A T+
Sbjct: 4355 SAAWTA 4360
Score = 315 (115.9 bits), Expect = 6.5e-21, Sum P(2) = 6.5e-21
Identities = 97/336 (28%), Positives = 152/336 (45%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 376
A +V++ EV+ WG +L G + PKL + + + + G++ T ++ G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSD--AQTIEAGQYCTFVISTDG 422
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIH-VSSVSCGPWHTAVVTSAGQLF 434
+ G + +G LG G+ + KKL P I VSS HT T+ G++F
Sbjct: 423 SVRACGKGS--YGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 435 TFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXX 493
++GDG +G LGHG+ + P+ + L+G V + G H+AAV E
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------------ 528
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTM 552
G+L+TW +R +PT V + N +VSCG S T+AL+ G V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSF 586
Query: 553 GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 612
G G+LG N +V L F+ ++ G LTS +VY WG GA L
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--L 644
Query: 613 GHGDTDDRNF-PSLVEALKDKQVKSIVCGTSFTAAI 647
G G ++ P L+E L ++ + G S A+
Sbjct: 645 GCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL 680
Score = 295 (108.9 bits), Expect = 5.3e-17, Sum P(3) = 5.3e-17
Identities = 89/328 (27%), Positives = 151/328 (46%)
Query: 325 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 384
+V+ WG G+L +V P + + V CG++ T + +G + G
Sbjct: 3998 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEG 4054
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGDGTF 441
+ +G LG GN L + ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4055 S--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
G LGHG+ PR++++L+G V+ +CG H+A V GKLFT+
Sbjct: 4112 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS------------DGKLFTFG 4159
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTMGSPVYGQL 560
+ +P V AL QV+CG + T+A++ G V+ G YG+L
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4219
Query: 561 GDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 619
G + K P +++ L ++++ACG LT VYT+G+ L G +
Sbjct: 4220 GLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4278
Query: 620 RNFPSLVEALKDKQVKSIVCGTSFTAAI 647
N P + L ++ + G T A+
Sbjct: 4279 HNRPQQIPVLAGVIIEDVAVGAEHTLAL 4306
Score = 243 (90.6 bits), Expect = 9.4e-12, Sum P(3) = 9.4e-12
Identities = 76/289 (26%), Positives = 130/289 (44%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
D+Y WG G L ++ +P P V CG T V+ + G +
Sbjct: 3998 DVYLWGAGR--HGQLAEAGR-NVMVPAA--APSFS-QAQQVICGQNCTFVIQANGTVLAC 4051
Query: 437 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVR--AACGV-WHTAAVVEVMVGXXXXXXXX 493
G+G++G LG G+ + + +L+G + +CG H+ A+ E
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4099
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 553
G++F+W + + P + AL Q+SCG + +T+ G ++T G
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 554 SPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGR 611
+ YG+LG +N KLP RV L + ++ACG H +AV + V+ +G G G+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4218
Query: 612 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL--HKWVSGVDQ 658
LG G++ ++ P ++ L +K + CGT F+ A+ H + G D+
Sbjct: 4219 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4267
Score = 238 (88.8 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 80/296 (27%), Positives = 138/296 (46%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
++Y WG SN + L+ G + + PK P ++ G + T V+++ G +
Sbjct: 373 EVYVWG-SNSSHQLV-EGTQEKILQPKL--APSFS-DAQTIEAGQYCTFVISTDGSVRAC 427
Query: 437 GDGTFGVLGHGDRISVSTPREV--DSLKGLRTVRAACGV-WHTAAVVEVMVGXXXXXXXX 493
G G++G LG GD + ST +++ + + ++ V ++ G HT A
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT------------T 475
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNF--CQVSCGHSLTVALTTTGHVYT 551
G++F+W + P + ++ C VS G+ + A+T G +YT
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGELYT 534
Query: 552 MGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVYTWGKGA 608
G +G+LG +N + +PT V K N V E++CG H L+ RT V+++G G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VWSFGGGD 590
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGC 664
NG+LGHGDT+ P ++EAL+ ++ + G+ + A+ V C GC
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGC 646
Score = 233 (87.1 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 63/218 (28%), Positives = 107/218 (49%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
++ WGE GD G LG G S + +P V+ + +V ++CG H ++K
Sbjct: 532 LYTWGE--GDFGRLGHGDSNSRN---------IPTLVKD--ISNVGEVSCGSSHTIALSK 578
Query: 323 QGE-VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 381
G V+S+G G+LGHG + V PK+I+AL+ + + V G + A+T +G +Y W
Sbjct: 579 DGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G C LG G+ + L KL L + VS G H ++ +++ +G+ +
Sbjct: 639 GCGAC----LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Query: 442 GVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAA 478
G G G+ ++ P++V L G+ + + G H+ A
Sbjct: 695 GQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 178 (67.7 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 41/138 (29%), Positives = 73/138 (52%)
Query: 294 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 352
+ PK +E+ + ++ + G + + +T G+V++WG G LG G ++ PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 411
L + V+ G+ H A++ ++Y WG N + G G GN + PKK++G L+G
Sbjct: 661 ELAATRIVDVSIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717
Query: 412 IHVSSVSCGPWHTAVVTS 429
I + +S G H+ T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735
Score = 69 (29.3 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 589 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
D+H L + +VY WG G +G+L RN A Q + ++CG + T I
Sbjct: 3990 DWH---LGGKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVI 4042
Score = 43 (20.2 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 602 YTWGKGANGRLGH 614
+T GKG +GRL H
Sbjct: 1693 HTGGKGESGRLHH 1705
Score = 39 (18.8 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 651 KWVSGVDQSMCS 662
KW++G+D+ + S
Sbjct: 3971 KWINGMDEQIMS 3982
Score = 39 (18.8 bits), Expect = 9.4e-12, Sum P(3) = 9.4e-12
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 355 KNINVELVACG-EHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
+N+ ++ V+ E C + +G + T G +GL G
Sbjct: 2026 ENLPIQEVSFDPEKAQCCLVENGQILTHGSGGKGYGLASTG 2066
Score = 37 (18.1 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 625 LVEALKDKQVKSIVCG 640
L+ L KQ++ +VCG
Sbjct: 4714 LLSLLTAKQLEQMVCG 4729
Score = 37 (18.1 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 43 RLANDESILIWISGKEEK 60
RL IL+ +SG EEK
Sbjct: 1637 RLEALHQILVLLSGMEEK 1654
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 449 (163.1 bits), Expect = 1.6e-33, Sum P(3) = 1.6e-33
Identities = 131/383 (34%), Positives = 186/383 (48%)
Query: 268 GECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVF 327
G+C D L G R G A + VP A S Q + CG ++ G V
Sbjct: 3993 GKC--DVYLWGA-GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQANGTVL 4047
Query: 328 SWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMYTWGGS 384
+ GE GRLG G D+ +I AL+ V +LV +CG + H+ A+T SG++++WG
Sbjct: 4048 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 444
+ +G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G +G L
Sbjct: 4108 D--YGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL 4164
Query: 445 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXX 504
G G+ + P V +L+G + + ACG+ HT AV GKL
Sbjct: 4165 GLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL------- 4217
Query: 505 XXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 564
A+ P V L +V+CG +VALT GHVYT G L + +
Sbjct: 4218 ----GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGR 4273
Query: 565 A-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 623
A N P ++ L +E++A G H L S +VY WG + G+LG G T+ P
Sbjct: 4274 ARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREP 4332
Query: 624 SLVEALKDKQVKSIVCGTSFTAA 646
+LV L+ K V+ I G +AA
Sbjct: 4333 TLVTVLQGKNVRQISAGRCHSAA 4355
Score = 359 (131.4 bits), Expect = 8.0e-26, Sum P(2) = 8.0e-26
Identities = 106/347 (30%), Positives = 160/347 (46%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 365
D Q I G +++ G V + G+ GRLG G ++ S K + + +++ V+
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 366 ---EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 422
+ HT A T G++++WG + +G LGHGN + PK + GPL+G V VS G
Sbjct: 464 KGSDGHTLAFTTEGEVFSWGDGD--YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYR 521
Query: 423 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 482
H+A VT G+L+T+G+G FG LGHGD S + P V + + V +CG HT A+ +
Sbjct: 522 HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK- 578
Query: 483 MVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLV--PTCVAALVEPNFCQVSCGHSLT 540
G+ W + V P + AL +V G +
Sbjct: 579 -----------DGRT-VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS 626
Query: 541 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 600
+ALT+TG VY G G +A P +E +L + +I+ GD H L+ E
Sbjct: 627 LALTSTGQVYAWGCGACLGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNE 685
Query: 601 VYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
VY WG + G+ G G+ T P V L ++ I GTS + A
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 352 (129.0 bits), Expect = 4.6e-23, Sum P(3) = 4.6e-23
Identities = 100/306 (32%), Positives = 152/306 (49%)
Query: 295 VPKAVESAVVLDVQNIACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 353
V A++ VV + +CG H+ +T+ GEVFSWG+ G+LGHG P+ I+A
Sbjct: 4070 VISALQGFVVTQLVT-SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA 4128
Query: 354 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 413
L+ V ++CG H+ VT G ++T+G N ++G LG GN + LP+++ LEG
Sbjct: 4129 LQGEEVVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQ 4185
Query: 414 VSSVSCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
+ V+CG HT V++ G + + FGDG +G LG G+ + S+P++VD L G+ + ACG
Sbjct: 4186 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACG 4245
Query: 473 VWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQ 532
+ A+ + G ++T+ P + L
Sbjct: 4246 TQFSVALTK------------DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIED 4293
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYH 591
V+ G T+AL +TG VY GS GQLG N + PT V KN V +I+ G H
Sbjct: 4294 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKN-VRQISAGRCH 4352
Query: 592 VAVLTS 597
A T+
Sbjct: 4353 SAAWTA 4358
Score = 316 (116.3 bits), Expect = 5.1e-21, Sum P(2) = 5.1e-21
Identities = 98/336 (29%), Positives = 152/336 (45%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 376
A +V++ EV+ WG +L G + PKL + + + + G++ T ++ G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSD--AQTIEAGQYCTFVISTDG 422
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIH-VSSVSCGPWHTAVVTSAGQLF 434
+ G + +G LG G+ + KKL P I VSS HT T+ G++F
Sbjct: 423 SVRACGKGS--YGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 435 TFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXX 493
++GDG +G LGHG+ + P+ + L+G V + G H+AAV E
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------------ 528
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTM 552
G+L+TW +R +PT V + N +VSCG S T+AL+ G V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSF 586
Query: 553 GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 612
G G+LG N +V L F+ ++ G LTS +VY WG GA L
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--L 644
Query: 613 GHGDTDDRNF-PSLVEALKDKQVKSIVCGTSFTAAI 647
G G ++ P L+E L ++ I G S A+
Sbjct: 645 GCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL 680
Score = 297 (109.6 bits), Expect = 3.2e-17, Sum P(3) = 3.2e-17
Identities = 90/328 (27%), Positives = 151/328 (46%)
Query: 325 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 384
+V+ WG G+L +V P + + V CG++ T + +G + G
Sbjct: 3996 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEG 4052
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGDGTF 441
+ +G LG GN L + ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4053 S--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
G LGHG+ PR++++L+G V+ +CG H+A V GKLFT+
Sbjct: 4110 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS------------DGKLFTFG 4157
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTMGSPVYGQL 560
+ +P V AL QV+CG + T+A++ G V+ G YG+L
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4217
Query: 561 GDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 619
G + K P +V+ L ++++ACG LT VYT+G+ L G +
Sbjct: 4218 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4276
Query: 620 RNFPSLVEALKDKQVKSIVCGTSFTAAI 647
N P + L ++ + G T A+
Sbjct: 4277 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304
Score = 244 (91.0 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 77/289 (26%), Positives = 130/289 (44%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
D+Y WG G L ++ +P P V CG T V+ + G +
Sbjct: 3996 DVYLWGAGR--HGQLAEAGR-NVMVPAA--APSFS-QAQQVICGQNCTFVIQANGTVLAC 4049
Query: 437 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVR--AACGV-WHTAAVVEVMVGXXXXXXXX 493
G+G++G LG G+ + + +L+G + +CG H+ A+ E
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4097
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 553
G++F+W + + P + AL Q+SCG + +T+ G ++T G
Sbjct: 4098 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4157
Query: 554 SPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGR 611
+ YG+LG +N KLP RV L + ++ACG H +AV + V+ +G G G+
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4216
Query: 612 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL--HKWVSGVDQ 658
LG G++ ++ P V+ L +K + CGT F+ A+ H + G D+
Sbjct: 4217 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4265
Score = 238 (88.8 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 80/296 (27%), Positives = 138/296 (46%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
++Y WG SN + L+ G + + PK P ++ G + T V+++ G +
Sbjct: 373 EVYVWG-SNSSHQLV-EGTQEKILQPKL--APSFS-DAQTIEAGQYCTFVISTDGSVRAC 427
Query: 437 GDGTFGVLGHGDRISVSTPREV--DSLKGLRTVRAACGV-WHTAAVVEVMVGXXXXXXXX 493
G G++G LG GD + ST +++ + + ++ V ++ G HT A
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT------------T 475
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNF--CQVSCGHSLTVALTTTGHVYT 551
G++F+W + P + ++ C VS G+ + A+T G +YT
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGELYT 534
Query: 552 MGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVYTWGKGA 608
G +G+LG +N + +PT V K N V E++CG H L+ RT V+++G G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VWSFGGGD 590
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGC 664
NG+LGHGDT+ P ++EAL+ ++ + G+ + A+ V C GC
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGC 646
Score = 232 (86.7 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 62/218 (28%), Positives = 107/218 (49%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
++ WGE GD G LG G S + +P V+ + +V ++CG H ++K
Sbjct: 532 LYTWGE--GDFGRLGHGDSNSRN---------IPTLVKD--ISNVGEVSCGSSHTIALSK 578
Query: 323 QGE-VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 381
G V+S+G G+LGHG + V PK+I+AL+ + + V G + A+T +G +Y W
Sbjct: 579 DGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G C LG G+ + L KL L + +S G H ++ +++ +G+ +
Sbjct: 639 GCGAC----LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Query: 442 GVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAA 478
G G G+ ++ P++V L G+ + + G H+ A
Sbjct: 695 GQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 177 (67.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 40/138 (28%), Positives = 73/138 (52%)
Query: 294 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 352
+ PK +E+ + ++ + G + + +T G+V++WG G LG G ++ PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 411
L + ++ G+ H A++ ++Y WG N + G G GN + PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLALSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717
Query: 412 IHVSSVSCGPWHTAVVTS 429
I + +S G H+ T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735
Score = 69 (29.3 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 589 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
D+H L + +VY WG G +G+L RN A Q + ++CG + T I
Sbjct: 3988 DWH---LGGKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVI 4040
Score = 41 (19.5 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 355 KNINVELVACG-EHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
+N+ ++ V+ E C + +G + T G +GL G
Sbjct: 2024 ENLPIQEVSFDPEKAQCCIVENGQILTHGSGGKGYGLASTG 2064
Score = 39 (18.8 bits), Expect = 8.0e-26, Sum P(2) = 8.0e-26
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 651 KWVSGVDQSMCS 662
KW++G+D+ + S
Sbjct: 3969 KWINGMDEQIMS 3980
Score = 37 (18.1 bits), Expect = 1.6e-33, Sum P(3) = 1.6e-33
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 625 LVEALKDKQVKSIVCG 640
L+ L KQ++ +VCG
Sbjct: 4712 LLSLLTAKQLEQMVCG 4727
Score = 37 (18.1 bits), Expect = 1.6e-33, Sum P(3) = 1.6e-33
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 43 RLANDESILIWISGKEEK 60
RL IL+ +SG EEK
Sbjct: 1637 RLEALHQILVLLSGMEEK 1654
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 448 (162.8 bits), Expect = 1.6e-33, Sum P(3) = 1.6e-33
Identities = 130/383 (33%), Positives = 186/383 (48%)
Query: 268 GECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVF 327
G+C D L G R G A + VP A S Q + CG ++ G V
Sbjct: 3996 GKC--DVYLWGA-GRHGQLAEAGRNVMVPAAAPS--FSQAQQVICGQNCTFVIQANGTVL 4050
Query: 328 SWGEELGGRLGHGVDSDVSHPKLIDALKNINV-ELV-ACG-EHHTCAVTLSGDMYTWGGS 384
+ GE GRLG G D+ +I AL+ V +LV +CG + H+ A+T SG++++WG
Sbjct: 4051 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4110
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 444
+ +G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G +G L
Sbjct: 4111 D--YGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRL 4167
Query: 445 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXX 504
G G+ + P V +L+G + + ACG+ HT AV GKL
Sbjct: 4168 GLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL------- 4220
Query: 505 XXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 564
A+ P V L +V+CG +VALT GHVYT G L + +
Sbjct: 4221 ----GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGR 4276
Query: 565 A-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 623
A N P ++ L +E++A G H L S +VY WG + G+LG G T+ P
Sbjct: 4277 ARNHNRPQQIP-VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREP 4335
Query: 624 SLVEALKDKQVKSIVCGTSFTAA 646
+LV L+ K ++ I G +AA
Sbjct: 4336 TLVTVLQGKNIRQISAGRCHSAA 4358
Score = 354 (129.7 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 108/346 (31%), Positives = 159/346 (45%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 365
D Q I G +++ G V + G+ GRLG G ++ S K + + +++ V+
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 366 ---EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 422
+ HT A T G++++WG + +G LGHGN + PK + GPL+G V VS G
Sbjct: 464 KGSDGHTLAFTTEGEVFSWGDGD--YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYR 521
Query: 423 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV-E 481
H+A VT G+L+T+G+G FG LGHGD S + P V + + V +CG HT A+ +
Sbjct: 522 HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSKD 579
Query: 482 VMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTV 541
GKL K P V AL +V G ++
Sbjct: 580 GRTVWSFGGGDNVGKL------GHGDTNRVYK-----PKVVEALQGMFIRKVCAGSQSSL 628
Query: 542 ALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 601
ALT+TG VY G G +A P +E +L + +I+ GD HV + EV
Sbjct: 629 ALTSTGQVYAWGCGACLGCGSSEATALRPKLIE-ELAATRIVDISIGDSHVWLFVMDNEV 687
Query: 602 YTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
Y WG + G+ G G+ T P V L ++ I GTS + A
Sbjct: 688 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 733
Score = 351 (128.6 bits), Expect = 4.7e-23, Sum P(3) = 4.7e-23
Identities = 99/306 (32%), Positives = 152/306 (49%)
Query: 295 VPKAVESAVVLDVQNIACGGR-HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 353
V A++ VV + +CG H+ +T+ GEVFSWG+ G+LGHG P+ I+A
Sbjct: 4073 VISALQGFVVTQLVT-SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA 4131
Query: 354 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 413
L+ V ++CG H+ VT G ++T+G N ++G LG GN + LP+++ LEG
Sbjct: 4132 LQGEEVVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGLGNTSNKKLPERVTA-LEGYQ 4188
Query: 414 VSSVSCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
+ V+CG HT V++ G + + FGDG +G LG G+ + S+P++VD L G+ + ACG
Sbjct: 4189 IGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACG 4248
Query: 473 VWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQ 532
+ A+ + G ++T+ P + L
Sbjct: 4249 TQFSVALTK------------DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIED 4296
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYH 591
V+ G T+AL +TG VY GS GQLG N + PT V KN + +I+ G H
Sbjct: 4297 VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKN-IRQISAGRCH 4355
Query: 592 VAVLTS 597
A T+
Sbjct: 4356 SAAWTA 4361
Score = 309 (113.8 bits), Expect = 8.6e-19, Sum P(3) = 8.6e-19
Identities = 98/332 (29%), Positives = 151/332 (45%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 376
A +V++ EV+ WG +L G + PK+ AL + + + G++ T ++ G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKM--ALSFSDAQTIEAGQYCTFVISTDG 422
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIH-VSSVSCGPWHTAVVTSAGQLF 434
+ G + +G LG G+ + KKL P I VSS HT T+ G++F
Sbjct: 423 SVRACGKGS--YGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 435 TFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXX 493
++GDG +G LGHG+ + P+ + L+G V + G H+AAV E
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------------ 528
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTM 552
G+L+TW +R +PT V + N +VSCG S T+AL+ G V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSF 586
Query: 553 GS-PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 611
G G+LG N +V L F+ ++ G LTS +VY WG GA
Sbjct: 587 GGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC-- 644
Query: 612 LGHGDTDDRNF-PSLVEALKDKQVKSIVCGTS 642
LG G ++ P L+E L ++ I G S
Sbjct: 645 LGCGSSEATALRPKLIEELAATRIVDISIGDS 676
Score = 297 (109.6 bits), Expect = 2.6e-17, Sum P(3) = 2.6e-17
Identities = 90/328 (27%), Positives = 151/328 (46%)
Query: 325 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 384
+V+ WG G+L +V P + + V CG++ T + +G + G
Sbjct: 3999 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEG 4055
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGP-WHTAVVTSAGQLFTFGDGTF 441
+ +G LG GN L + ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4056 S--YGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4112
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
G LGHG+ PR++++L+G V+ +CG H+A V GKLFT+
Sbjct: 4113 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS------------DGKLFTFG 4160
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTMGSPVYGQL 560
+ +P V AL QV+CG + T+A++ G V+ G YG+L
Sbjct: 4161 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4220
Query: 561 GDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 619
G + K P +V+ L ++++ACG LT VYT+G+ L G +
Sbjct: 4221 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4279
Query: 620 RNFPSLVEALKDKQVKSIVCGTSFTAAI 647
N P + L ++ + G T A+
Sbjct: 4280 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4307
Score = 244 (91.0 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 77/289 (26%), Positives = 130/289 (44%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
D+Y WG G L ++ +P P V CG T V+ + G +
Sbjct: 3999 DVYLWGAGR--HGQLAEAGR-NVMVPAA--APSFS-QAQQVICGQNCTFVIQANGTVLAC 4052
Query: 437 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVR--AACGV-WHTAAVVEVMVGXXXXXXXX 493
G+G++G LG G+ + + +L+G + +CG H+ A+ E
Sbjct: 4053 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4100
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 553
G++F+W + + P + AL Q+SCG + +T+ G ++T G
Sbjct: 4101 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4160
Query: 554 SPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGR 611
+ YG+LG +N KLP RV L + ++ACG H +AV + V+ +G G G+
Sbjct: 4161 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4219
Query: 612 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL--HKWVSGVDQ 658
LG G++ ++ P V+ L +K + CGT F+ A+ H + G D+
Sbjct: 4220 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4268
Score = 234 (87.4 bits), Expect = 6.5e-11, Sum P(3) = 6.5e-11
Identities = 81/297 (27%), Positives = 138/297 (46%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
++Y WG SN + L+ G + + PK L ++ G + T V+++ G +
Sbjct: 373 EVYVWG-SNSSHQLV-EGTQEKILQPKMA---LSFSDAQTIEAGQYCTFVISTDGSVRAC 427
Query: 437 GDGTFGVLGHGDRISVSTPREV--DSLKGLRTVRAACGV-WHTAAVVEVMVGXXXXXXXX 493
G G++G LG GD + ST +++ + + ++ V ++ G HT A
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT------------T 475
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNF--CQVSCGHSLTVALTTTGHVYT 551
G++F+W + P + ++ C VS G+ + A+T G +YT
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGELYT 534
Query: 552 MGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVYTWGKGA 608
G +G+LG +N + +PT V K N V E++CG H L+ RT V+++G G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VWSFGGGD 590
Query: 609 N-GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGC 664
N G+LGHGDT+ P +VEAL+ ++ + G+ + A+ V C GC
Sbjct: 591 NVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGC 647
Score = 221 (82.9 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 61/219 (27%), Positives = 107/219 (48%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
++ WGE GD G LG G S + +P V+ + +V ++CG H ++K
Sbjct: 532 LYTWGE--GDFGRLGHGDSNSRN---------IPTLVKD--ISNVGEVSCGSSHTIALSK 578
Query: 323 QGE-VFSWGE-ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 380
G V+S+G + G+LGHG + V PK+++AL+ + + V G + A+T +G +Y
Sbjct: 579 DGRTVWSFGGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYA 638
Query: 381 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 440
WG C LG G+ + L KL L + +S G H + +++ +G+ +
Sbjct: 639 WGCGAC----LGCGSSEATALRPKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGNNS 694
Query: 441 FGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAA 478
G G G+ ++ P++V L G+ + + G H+ A
Sbjct: 695 MGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 733
Score = 175 (66.7 bits), Expect = 7.8e-08, Sum P(3) = 7.8e-08
Identities = 40/138 (28%), Positives = 71/138 (51%)
Query: 294 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 352
+ PK VE+ + ++ + G + + +T G+V++WG G LG G ++ PKLI+
Sbjct: 604 YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 661
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 411
L + ++ G+ H + ++Y WG N + G G GN + PKK++G L+G
Sbjct: 662 ELAATRIVDISIGDSHVWLFVMDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 718
Query: 412 IHVSSVSCGPWHTAVVTS 429
I + +S G H+ T+
Sbjct: 719 IAIQQISAGTSHSLAWTA 736
Score = 69 (29.3 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 589 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
D+H L + +VY WG G +G+L RN A Q + ++CG + T I
Sbjct: 3991 DWH---LGGKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVI 4043
Score = 39 (18.8 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 651 KWVSGVDQSMCS 662
KW++G+D+ + S
Sbjct: 3972 KWINGMDEQIMS 3983
Score = 39 (18.8 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 355 KNINVELVACG-EHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
+N+ ++ V+ E C + +G + T G +GL G
Sbjct: 2027 ENLPIQEVSFDPEKAQCCLVENGQILTHGSGGKGYGLASTG 2067
Score = 38 (18.4 bits), Expect = 1.6e-33, Sum P(3) = 1.6e-33
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 1019 DEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMV 1078
D ++ Q G + ++ PGG + +RK++ E+ E Y + +
Sbjct: 4653 DSFIGQSADGKMVPII--PGG-NSIPLTFSNRKEYVERAIE-------------YRLHEM 4696
Query: 1079 DKSSVSIGREGLA 1091
D+ V+ REG++
Sbjct: 4697 DRQQVAAVREGMS 4709
Score = 37 (18.1 bits), Expect = 1.6e-33, Sum P(3) = 1.6e-33
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 43 RLANDESILIWISGKEEK 60
RL IL+ +SG EEK
Sbjct: 1638 RLEALHQILVLLSGMEEK 1655
Score = 37 (18.1 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 625 LVEALKDKQVKSIVCG 640
L+ L KQ++ +VCG
Sbjct: 4716 LLSLLTAKQLEQMVCG 4731
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 397 (144.8 bits), Expect = 4.4e-33, P = 4.4e-33
Identities = 109/369 (29%), Positives = 175/369 (47%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
P+ + + V+++ CG RH V G V++ G G+LGH + P+ + AL
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD 82
Query: 356 NINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 414
N+ V+CGE HT A+ G +Y WG S+ GLLG +E + +P+ + L I +
Sbjct: 83 AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQI 139
Query: 415 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGV 473
V+CG +H+ ++ A ++F +G +G LG G D ++P+ + SL G+ ++ A G
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGG 199
Query: 474 WHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQV 533
H+ + G +F W + R VP + +L +
Sbjct: 200 AHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYI 247
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHV- 592
CG T ALT G V+T G+ YGQLG + ++ R +L + V +IACG H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Query: 593 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA--ICLH 650
A + S +Y++G G NG+LG G T +R P V+ + + C F + C+
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG--NWFPYNGQCPPDFDSEEYFCVK 365
Query: 651 KWVSGVDQS 659
+ SG DQS
Sbjct: 366 RIFSGGDQS 374
Score = 344 (126.2 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 102/326 (31%), Positives = 153/326 (46%)
Query: 329 WGEELGGRLG-HGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
WG G+LG G+D + V P+ D N V V CG HT V G +YT G C
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG---C 60
Query: 387 N-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFG 442
N G LGH E S P+++ L+ ++ +VSCG HT + GQ++ +G DG G
Sbjct: 61 NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXX 502
+LG + I V PR + SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKA------------SEVFCWGQ 163
Query: 503 XXXXXXXXXXK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
+ + P + +L+ F Q++ G + + LT +G ++ G +GQLG
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 562 DPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 620
N + +P ++ T+ V I CG+ H A LT V+T+G G G+LGH T
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 621 NFPSLVEALKDKQVKSIVCGTSFTAA 646
P V L V I CG T+A
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSA 308
Score = 306 (112.8 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 77/218 (35%), Positives = 112/218 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG DG LG GS ++ VP+ ++S + + +ACG H+ ++K
Sbjct: 105 VYAWG-LDSDGQLG----LLGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKA 155
Query: 324 GEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
EVF WG+ G+LG G+D + P+LI +L I +A G H+ +TLSG ++ WG
Sbjct: 156 SEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWG 215
Query: 383 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 442
+ FG LG +E ++P L L + + CG HTA +T G +FTFG G +G
Sbjct: 216 RNK--FGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
LGH PR+V L G + ACG HT+A V
Sbjct: 273 QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 273 (101.2 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 84/276 (30%), Positives = 128/276 (46%)
Query: 378 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
M WG N +FG LG G +E + P+K + + V V CG HT V G ++T
Sbjct: 1 MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57
Query: 436 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXG 495
G G LGH S P +V +L V +CG HT A+ + G
Sbjct: 58 CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103
Query: 496 KLFTWXXXXXXXXXXXXKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
+++ W E + VP + +L + QV+CG+ ++AL+ V+ G
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 555 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 611
YGQLG D K P ++ L F++ IA G H VLT ++ WG+ G+
Sbjct: 164 NKYGQLGLGIDCKKQAS-PQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 612 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
LG D +DR P+L+++L+ +++ I CG TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257
Score = 253 (94.1 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 65/193 (33%), Positives = 101/193 (52%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG+ G LG GI K S P+ ++S + + IA GG H+ ++T
Sbjct: 158 VFCWGQ-NKYGQLGLGIDCK------KQAS--PQLIKSLLGIPFMQIAAGGAHSFVLTLS 208
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G +F WG G+LG ++D P L+ +L+ + + CGE HT A+T G ++T+G
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGTFG 442
+G LGH + P+K+ L G V+ ++CG HT A V S+G++++FG G G
Sbjct: 269 GG--YGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 443 VLGHGDRISVSTP 455
LG G + +P
Sbjct: 326 QLGTGSTSNRKSP 338
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 407 (148.3 bits), Expect = 6.1e-33, Sum P(2) = 6.1e-33
Identities = 111/347 (31%), Positives = 172/347 (49%)
Query: 288 GVKMDSFVPKAVESAVVLD--VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 345
G + +P+ + D V+ +ACGG H+ + + GEV++ G G+LGH +S+
Sbjct: 15 GSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--ESEG 72
Query: 346 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSL-WLPK 403
S P+ I AL ++ VACGE H+ A++ G +++WG GS+ GL + +++ L K
Sbjct: 73 SKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIK 132
Query: 404 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLK 462
KLN + +SCG WH + + GQ FT+G ++G LG G S ++P+ V SL
Sbjct: 133 KLNQQT----ILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLD 188
Query: 463 GLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCV 522
G+ + A G H+ A+ G +F W + R P V
Sbjct: 189 GIPLAQVAAGGAHSFAL------------SLSGAVFGWGKNSSGQLGLSDERDRESPCHV 236
Query: 523 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNF 581
L +SCG T LT +G V+T G+ GQLG N ++ P RV +L +
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSE 295
Query: 582 VEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 627
V +IACG +H +A + S +Y +G G G+LG G T + PS V+
Sbjct: 296 VSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 330 (121.2 bits), Expect = 7.7e-26, P = 7.7e-26
Identities = 100/323 (30%), Positives = 154/323 (47%)
Query: 329 WGEELGGRLGHGVDSDV--SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
WG G+ G G + V P++ + + NV+ VACG +H+ + G++YT G N
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 446
G LGH +E S P+ + G L G H+ V+CG H+ ++ GQ+F++G G+ G LG
Sbjct: 63 K-GQLGHESEGSK--PEPI-GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL 118
Query: 447 GD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXX 505
+V+ PR + L ++ +CG WH A+ G+ FTW
Sbjct: 119 TTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA------------ADGQFFTWGQNSY 166
Query: 506 XXXXXXXK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DP 563
+ ++ P V +L QV+ G + + AL+ +G V+ G GQLG
Sbjct: 167 GQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSD 226
Query: 564 KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 623
+ + + P V+ L V I+CG+ H AVLT V+T+G G+ G+LGH +D P
Sbjct: 227 ERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 624 SLVEALKDKQVKSIVCGTSFTAA 646
V L +V I CG T A
Sbjct: 286 RRVLELMGSEVSQIACGRHHTLA 308
Score = 286 (105.7 bits), Expect = 4.3e-21, P = 4.3e-21
Identities = 82/274 (29%), Positives = 129/274 (47%)
Query: 378 MYTWGGSNCNFGLLGHGNEMSLWLPK-KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
M WG S+ FG G G+ + + +P+ ++ G + +V V+CG H+ + G+++T
Sbjct: 1 MLCWGYSS--FGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTC 58
Query: 437 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGK 496
G T G LGH S P + +L G V ACG H+ A+ + G+
Sbjct: 59 GLNTKGQLGHESE--GSKPEPIGALAGQHIVHVACGESHSVALSD------------QGQ 104
Query: 497 LFTWXXXXXXXXXXXX-KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
+F+W ++A VP + L + Q+SCG+ +AL G +T G
Sbjct: 105 VFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQN 164
Query: 556 VYGQLGDPKA--NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 613
YGQLG K + P RV+ L + ++A G H L+ V+ WGK ++G+LG
Sbjct: 165 SYGQLGLGKECPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223
Query: 614 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
D DR P V+ L+ ++V I CG TA +
Sbjct: 224 LSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Score = 264 (98.0 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 72/218 (33%), Positives = 105/218 (48%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG DG LG ++ VP+ ++ + I+CG H +
Sbjct: 105 VFSWG-AGSDGQLG--------LTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAAD 155
Query: 324 GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G+ F+WG+ G+LG G + + P+ + +L I + VA G H+ A++LSG ++ WG
Sbjct: 156 GQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWG 215
Query: 383 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 442
++ G LG +E P + L V +SCG HTAV+T +G +FTFG G+ G
Sbjct: 216 KNSS--GQLGLSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
LGH PR V L G + ACG HT A V
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFV 310
Score = 40 (19.1 bits), Expect = 6.1e-33, Sum P(2) = 6.1e-33
Identities = 10/57 (17%), Positives = 22/57 (38%)
Query: 611 RLGHGDTDDRNF---PSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGC 664
R +G T+ +N ++ KD + K + ++ +H+W + C
Sbjct: 861 RESYGVTEHKNLIEDGDKIQVQKDNREKFVEAYVNYIFNCSIHEWYTAFSTGFLKVC 917
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 370 (135.3 bits), Expect = 6.6e-33, P = 6.6e-33
Identities = 118/397 (29%), Positives = 185/397 (46%)
Query: 283 SGSYA--GV-KMDSFVPKAVESAVV-LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG 338
SG Y G+ +DS AV SA+ + +ACGG H +T+ VF+ G G+LG
Sbjct: 56 SGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQLG 115
Query: 339 -HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM 397
V S P + L ++ ++ G +H+ A+T+ G++Y WG ++ G LG G +
Sbjct: 116 VSDVKSHAMDPLEVSGLDK-DILHISAGYYHSAAITVDGELYMWGKNSS--GQLGLGKKA 172
Query: 398 S--LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-- 453
+ + +P K+ L GI + SV+ G H+ VT G++ ++G G G LGHG + S+
Sbjct: 173 ARVVRVPTKVEA-LHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGI 231
Query: 454 -------TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXX 506
TPR + L+G++ A G+ H+A E G F +
Sbjct: 232 LRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDE------------NGSAFMFGEKSIN 279
Query: 507 XXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKA 565
P+ ++ + P +V+CG T +T G +YT GS G LG D
Sbjct: 280 KMGFGGVRNATTPSIISEV--PYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTY 337
Query: 566 NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN------------GRLG 613
P RVEG ++ V +++CG H A + S V+TWG G + G+LG
Sbjct: 338 VSHSPVRVEGPFLESTVSQVSCGWKHTAAI-SDNNVFTWGWGGSHGTFSVDGHSSGGQLG 396
Query: 614 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH 650
HG D P++V+ K+ + I CG + TAA+ H
Sbjct: 397 HGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLEH 433
Score = 322 (118.4 bits), Expect = 9.2e-28, P = 9.2e-28
Identities = 86/231 (37%), Positives = 120/231 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDS-FVPKAVESAVVLDVQNIACGGRHAALVTK 322
V WG G G LG G H+S + ++ +S F P+ ++ + V N+A G H+A +
Sbjct: 209 VLSWGG-GGSGRLGHG-HQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDE 266
Query: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G F +GE+ ++G G + + P +I + E VACG +HTC VT G++YTWG
Sbjct: 267 NGSAFMFGEKSINKMGFGGVRNATTPSIISEVPY--AEEVACGGYHTCVVTRGGELYTWG 324
Query: 383 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG----D 438
SN N G LG + P ++ GP VS VSCG HTA + S +FT+G
Sbjct: 325 -SNEN-GCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAI-SDNNVFTWGWGGSH 381
Query: 439 GTFGV--------LGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
GTF V LGHG + + P VD K +R V +CG HTAAV+E
Sbjct: 382 GTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLE 432
Score = 284 (105.0 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 86/292 (29%), Positives = 133/292 (45%)
Query: 275 ILGGGIHRSGSY--AGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEE 332
+ G++ G + VK + P V S + D+ +I+ G H+A +T GE++ WG+
Sbjct: 103 VFATGLNDCGQLGVSDVKSHAMDPLEV-SGLDKDILHISAGYYHSAAITVDGELYMWGKN 161
Query: 333 LGGRLGHGVDSD--VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGL 390
G+LG G + V P ++AL I ++ VA G H+ AVT G++ +WGG G
Sbjct: 162 SSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGS--GR 219
Query: 391 LGHGNEMSLW--------LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 442
LGHG++ SL+ +L LEGI V++V+ G H+A G F FG+ +
Sbjct: 220 LGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSIN 279
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXX 502
+G G + +TP + + V ACG +HT V G+L+TW
Sbjct: 280 KMGFGGVRNATTPSIISEVPYAEEV--ACGGYHTCVVTR------------GGELYTWGS 325
Query: 503 XXXXXXXXXXKEARLVPTCVAA-LVEPNFCQVSCGHSLTVALTTTGHVYTMG 553
P V +E QVSCG T A++ +V+T G
Sbjct: 326 NENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDN-NVFTWG 376
Score = 279 (103.3 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 92/335 (27%), Positives = 147/335 (43%)
Query: 321 TKQGEVFS--WGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGD 377
++ G+ F+ WG GRLG G +DS + P + AL + ++ VACG HT +T +
Sbjct: 44 SESGKRFAAMWGSGDYGRLGLGNLDSQWT-PAVCSALSDHSITAVACGGAHTLFLTETRR 102
Query: 378 MYTWGGSNCNFGLLGHGNEMSLWL-PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
++ G ++C G LG + S + P +++G L+ + +S G +H+A +T G+L+ +
Sbjct: 103 VFATGLNDC--GQLGVSDVKSHAMDPLEVSG-LDK-DILHISAGYYHSAAITVDGELYMW 158
Query: 437 GDGTFGVLGHGDRIS--VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXX 494
G + G LG G + + V P +V++L G+ A G H+ AV + G
Sbjct: 159 GKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTD---GGEVLSWGGG 215
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
G + P + L V+ G + G + G
Sbjct: 216 GSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGE 275
Query: 555 PVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 613
++G N P+ + + EE+ACG YH V+T E+YTWG NG LG
Sbjct: 276 KSINKMGFGGVRNATTPSIIS---EVPYAEEVACGGYHTCVVTRGGELYTWGSNENGCLG 332
Query: 614 HGDTDDRNFPSLVEA-LKDKQVKSIVCGTSFTAAI 647
T + P VE + V + CG TAAI
Sbjct: 333 TDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAI 367
Score = 237 (88.5 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 73/226 (32%), Positives = 110/226 (48%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
+++WG+ G LG G + + V+ VP VE+ + +Q++A G H+ VT
Sbjct: 155 LYMWGK-NSSGQLGLG--KKAARV-VR----VPTKVEALHGITIQSVALGSEHSVAVTDG 206
Query: 324 GEVFSWGEELGGRLGHGVDSDV-----SH----PKLIDALKNINVELVACGEHHTCAVTL 374
GEV SWG GRLGHG S + S+ P+LI L+ I V VA G H+
Sbjct: 207 GEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDE 266
Query: 375 SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 434
+G + +G + N +G G + P ++ E + V+CG +HT VVT G+L+
Sbjct: 267 NGSAFMFGEKSIN--KMGFGGVRNATTPSIIS---EVPYAEEVACGGYHTCVVTRGGELY 321
Query: 435 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV-RAACGVWHTAAV 479
T+G G LG +P V+ TV + +CG HTAA+
Sbjct: 322 TWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAI 367
Score = 184 (69.8 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 69/236 (29%), Positives = 103/236 (43%)
Query: 213 GSVNSLSSGGSDGRTGHLKGLSGDTFRVXXXXXXXXXXXXXXXXXXXXXXXV--FIWGEC 270
G V S GGS GR GH G F + + C
Sbjct: 207 GEVLSWGGGGS-GRLGH--GHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSAC 263
Query: 271 T---GDGILGG--GIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGE 325
T G + G I++ G + GV+ ++ P + V + +ACGG H +VT+ GE
Sbjct: 264 TDENGSAFMFGEKSINKMG-FGGVR-NATTPSIISE--VPYAEEVACGGYHTCVVTRGGE 319
Query: 326 VFSWGEELGGRLGHGVDSD-VSH-PKLIDA-LKNINVELVACGEHHTCAVTLSGDMYTWG 382
+++WG G LG DS VSH P ++ V V+CG HT A++ +++TWG
Sbjct: 320 LYTWGSNENGCLG--TDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAIS-DNNVFTWG 376
Query: 383 --GSNCNF--------GLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVV 427
GS+ F G LGHG+++ P ++ G + + +SCG HTA V
Sbjct: 377 WGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLG--KNVRAVHISCGFNHTAAV 430
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 395 (144.1 bits), Expect = 7.2e-33, P = 7.2e-33
Identities = 112/388 (28%), Positives = 177/388 (45%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
P+ + V V+++ CG RH V G V++ G G+LGH + P+ + AL
Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD 82
Query: 356 NINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 414
N+ V+CGE HT A+ G +Y WG S+ GL G+E + +P+ + L I +
Sbjct: 83 AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--QGSEECIRVPRNIKS-LSDIQI 139
Query: 415 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST-PREVDSLKGLRTVRAACGV 473
V+CG +H+ ++ A ++F +G +G LG G T P+ + SL G+ ++ A G
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 474 WHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQV 533
H+ + G +F W + R VP + +L +
Sbjct: 200 AHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYI 247
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHV- 592
CG T ALT G V+T G+ YGQLG + ++ R +L + V +IACG H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Query: 593 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA---LKDKQVKSIVCGTSFTAAICL 649
A + S +Y++G G NG+LG G T +R P V+ + Q + + C+
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY---FCV 364
Query: 650 HKWVSGVDQSMC-----SGCRIPFNFKR 672
+ SG DQS C P +F+R
Sbjct: 365 KRIFSGGDQSFSHYSSPQSCGPPDDFRR 392
Score = 341 (125.1 bits), Expect = 5.0e-27, P = 5.0e-27
Identities = 98/323 (30%), Positives = 147/323 (45%)
Query: 329 WGEELGGRLG-HGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
WG G+LG G+D + V P+ D N V V CG HT V G +YT G C
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG---C 60
Query: 387 N-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
N G LGH E S P+++ L+ ++ +VSCG HT + GQ++ +G + G LG
Sbjct: 61 NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 446 -HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXX 504
G + PR + SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKA------------SEVFCWGQNK 165
Query: 505 XXXXXXXXK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 563
+ + + P + +L+ F QV+ G + + LT +G ++ G +GQLG
Sbjct: 166 YGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN 225
Query: 564 KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 623
N + + L + I CG+ H A LT V+T+G G G+LGH T P
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 624 SLVEALKDKQVKSIVCGTSFTAA 646
V L V I CG T+A
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSA 308
Score = 307 (113.1 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 77/218 (35%), Positives = 112/218 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG DG LG GS ++ VP+ ++S + + +ACG H+ ++K
Sbjct: 105 VYAWG-LDSDGQLG----LQGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKA 155
Query: 324 GEVFSWGEELGGRLGHGVDSDV-SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
EVF WG+ G+LG G++ + P+LI +L I VA G H+ +TLSG ++ WG
Sbjct: 156 SEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Query: 383 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 442
+ FG LG +E ++P L L + + CG HTA +T G +FTFG G +G
Sbjct: 216 RNK--FGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
LGH PR+V L G + ACG HT+A V
Sbjct: 273 QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 261 (96.9 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 79/274 (28%), Positives = 124/274 (45%)
Query: 378 MYTWGGSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
M WG N ++G LG G + + L + + V V CG HT V G ++T
Sbjct: 1 MLCWG--NASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 437 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGK 496
G G LGH S P +V +L V +CG HT A+ + G+
Sbjct: 59 GCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQ 104
Query: 497 LFTWXXXXXXXXXXXXKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
++ W E + VP + +L + QV+CG+ ++AL+ V+ G
Sbjct: 105 VYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQN 164
Query: 556 VYGQLGDPKANGKL--PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 613
YGQLG K P ++ L F++ +A G H VLT ++ WG+ G+LG
Sbjct: 165 KYGQLGLGIECQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 614 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
D +DR P+L+++L+ +++ I CG TAA+
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257
Score = 255 (94.8 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 64/193 (33%), Positives = 102/193 (52%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG+ G LG GI K S P+ ++S + + +A GG H+ ++T
Sbjct: 158 VFCWGQ-NKYGQLGLGIECQ------KQTS--PQLIKSLLGIPFMQVAAGGAHSFVLTLS 208
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G +F WG G+LG ++D P L+ +L++ + + CGE HT A+T G ++T+G
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGTFG 442
+G LGH + P+K+ L G V+ ++CG HT A V S+G++++FG G G
Sbjct: 269 GG--YGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 443 VLGHGDRISVSTP 455
LG G + +P
Sbjct: 326 QLGTGSTSNRKSP 338
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 394 (143.8 bits), Expect = 9.1e-33, P = 9.1e-33
Identities = 101/335 (30%), Positives = 162/335 (48%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
P+ + + V+++ CG RH V G V++ G G+LGH + P+ + AL
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD 82
Query: 356 NINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 414
N+ V+CGE HT A+ G +Y WG S+ GLLG +E + +P+ + L I +
Sbjct: 83 AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQI 139
Query: 415 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGV 473
V+CG +H+ ++ A ++F +G +G LG G D ++P+ + SL G+ ++ A G
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGG 199
Query: 474 WHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQV 533
H+ + G +F W + R VP + +L +
Sbjct: 200 AHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYI 247
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHV- 592
CG T ALT G V+T G+ YGQLG + ++ R +L + V +IACG H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Query: 593 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 627
A + S +Y++G G NG+LG G T +R P V+
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 345 (126.5 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 103/326 (31%), Positives = 153/326 (46%)
Query: 329 WGEELGGRLG-HGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
WG G+LG G+D + V P+ D N V V CG HT V G +YT G C
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG---C 60
Query: 387 N-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFG 442
N G LGH E S P+++ L+ ++ +VSCG HT + GQ++ +G DG G
Sbjct: 61 NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXX 502
+LG + I V PR + SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKA------------SEVFCWGQ 163
Query: 503 XXXXXXXXXXK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
+ + P + +L+ F QV+ G + + LT +G ++ G +GQLG
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 562 DPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 620
N + +P ++ T+ V I CG+ H A LT V+T+G G G+LGH T
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 621 NFPSLVEALKDKQVKSIVCGTSFTAA 646
P V L V I CG T+A
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSA 308
Score = 307 (113.1 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 78/218 (35%), Positives = 112/218 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG DG LG GS ++ VP+ ++S + + +ACG H+ ++K
Sbjct: 105 VYAWG-LDSDGQLG----LLGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKA 155
Query: 324 GEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
EVF WG+ G+LG G+D + P+LI +L I VA G H+ +TLSG ++ WG
Sbjct: 156 SEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Query: 383 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 442
+ FG LG +E ++P L L + + CG HTA +T G +FTFG G +G
Sbjct: 216 RNK--FGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
LGH PR+V L G + ACG HT+A V
Sbjct: 273 QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 295 (108.9 bits), Expect = 4.6e-22, P = 4.6e-22
Identities = 85/285 (29%), Positives = 134/285 (47%)
Query: 297 KAVESAVVLDVQNI---ACGGRHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKLID 352
K E V LD QNI +CG H + +G+V++WG + G+LG G + + P+ I
Sbjct: 73 KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIK 132
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 412
+L +I + VACG +H+ A++ + +++ WG + +G LG G + +L L GI
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK--YGQLGLGIDCKKQASPQLIKSLLGI 190
Query: 413 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
V+ G H+ V+T +G +F +G FG LG D P + SL+ + V CG
Sbjct: 191 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCG 250
Query: 473 VWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQ 532
HTAA+ + G +FT+ + P V L+ Q
Sbjct: 251 EDHTAALTK------------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 298
Query: 533 VSCGHSLTVALT-TTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEG 575
++CG T A ++G +Y+ G GQLG +N K P V+G
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 272 (100.8 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 83/276 (30%), Positives = 128/276 (46%)
Query: 378 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
M WG N +FG LG G +E + P+K + + V V CG HT V G ++T
Sbjct: 1 MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57
Query: 436 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXG 495
G G LGH S P +V +L V +CG HT A+ + G
Sbjct: 58 CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103
Query: 496 KLFTWXXXXXXXXXXXXKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
+++ W E + VP + +L + QV+CG+ ++AL+ V+ G
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 555 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 611
YGQLG D K P ++ L F++ +A G H VLT ++ WG+ G+
Sbjct: 164 NKYGQLGLGIDCKKQAS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 612 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
LG D +DR P+L+++L+ +++ I CG TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257
Score = 252 (93.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 64/193 (33%), Positives = 101/193 (52%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG+ G LG GI K S P+ ++S + + +A GG H+ ++T
Sbjct: 158 VFCWGQ-NKYGQLGLGIDCK------KQAS--PQLIKSLLGIPFMQVAAGGAHSFVLTLS 208
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G +F WG G+LG ++D P L+ +L+ + + CGE HT A+T G ++T+G
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGTFG 442
+G LGH + P+K+ L G V+ ++CG HT A V S+G++++FG G G
Sbjct: 269 GG--YGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 443 VLGHGDRISVSTP 455
LG G + +P
Sbjct: 326 QLGTGSTSNRKSP 338
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 394 (143.8 bits), Expect = 9.1e-33, P = 9.1e-33
Identities = 106/325 (32%), Positives = 165/325 (50%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V+ +ACGG H+ + + GEV++ G G+LGH + + + P+ I AL + ++ VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93
Query: 367 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 425
H+ A++ G +++WG GS+ GL+ E S+ +P+ + L + VSCG WH
Sbjct: 94 SHSLALSDQGQLFSWGAGSDGQLGLMTI--EDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 426 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
+ + GQ FT+G + G LG G S ++P+ V SL+G+ + G H+ A+
Sbjct: 151 ALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL----- 205
Query: 485 GXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 544
G +F W ++ R P V L +SCG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 545 TTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVY 602
+G V+T G+ GQLG N ++ P RV +L + V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 603 TWGKGANGRLGHGDTDDRNFPSLVE 627
+G GA G+LG G T + PS V+
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 314 (115.6 bits), Expect = 4.1e-24, P = 4.1e-24
Identities = 98/323 (30%), Positives = 153/323 (47%)
Query: 329 WGEELGGRLG--HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
WG G+ G + V+ P++ + + +V+ VACG +H+ + G++YT G N
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-VNT 62
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 446
G LGH E + P+++ G L H+ V+CG H+ ++ GQLF++G G+ G LG
Sbjct: 63 K-GQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL 118
Query: 447 GD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXX 505
SV+ PR + L ++ +CG WH A+ G+ FTW
Sbjct: 119 MTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGRNSH 166
Query: 506 XXXXXXXK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DP 563
+ ++ P V +L QV G + + AL+ +G V+ G GQLG
Sbjct: 167 GQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 564 KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 623
+ + + P V+ T+ V I+CG+ H AVLT V+T+G G+ G+LGH +D P
Sbjct: 227 EKDRESPCHVKLLRTQKVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 624 SLVEALKDKQVKSIVCGTSFTAA 646
V L +V I CG T A
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLA 308
Score = 296 (109.3 bits), Expect = 3.6e-22, P = 3.6e-22
Identities = 84/301 (27%), Positives = 139/301 (46%)
Query: 279 GIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG 338
G++ G G + + P+ + + + ++ACG H+ ++ QG++FSWG G+LG
Sbjct: 59 GVNTKGQL-GHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLG 117
Query: 339 -HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM 397
++ V+ P+LI L + V+CG H A+ G +TWG ++ G LG G E
Sbjct: 118 LMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNS--HGQLGLGKEF 175
Query: 398 -SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPR 456
S P+++ LEGI ++ V G H+ ++ +G +F +G G LG D +P
Sbjct: 176 PSQASPQRVRS-LEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 457 EVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEAR 516
V L+ + V +CG HTA + + G +FT+
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDE 282
Query: 517 LVPTCVAALVEPNFCQVSCGHSLTVALT-TTGHVYTMGSPVYGQLGDPKA-NGKLPTRVE 574
+ P V L+ Q++CG T+A ++G +Y G GQLG N K P+ V+
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Query: 575 G 575
G
Sbjct: 343 G 343
Score = 228 (85.3 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 70/237 (29%), Positives = 105/237 (44%)
Query: 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 473
V V+CG H+ + G+++T G T G LGH +R + P ++ +L V ACG
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH-EREG-NKPEQIGALADQHIVHVACGE 93
Query: 474 WHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARL-VPTCVAALVEPNFCQ 532
H+ A+ + G+LF+W E + VP + L + Q
Sbjct: 94 SHSLALSD------------QGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQ 141
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA--NGKLPTRVEGKLTKNFVEEIACGDY 590
VSCG+ +AL G +T G +GQLG K + P RV L + ++ G
Sbjct: 142 VSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVVAGGA 200
Query: 591 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
H L+ V+ WG G+LG D DR P V+ L+ ++V I CG TA +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 394 (143.8 bits), Expect = 9.2e-33, P = 9.2e-33
Identities = 101/335 (30%), Positives = 161/335 (48%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
P+ + V V+++ CG RH V G V++ G G+LGH + P+ + AL
Sbjct: 25 PRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD 82
Query: 356 NINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 414
N+ VACGE HT A+ G +Y WG S+ GL G+E + +P+ + L I +
Sbjct: 83 AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL--QGSEECIRVPRNIKS-LSDIQI 139
Query: 415 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGV 473
V+CG +H+ ++ A ++F +G +G LG G D ++P+ + SL G+ ++ A G
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 474 WHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQV 533
H+ + G +F W + R VP + +L +
Sbjct: 200 AHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYI 247
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHV- 592
CG T ALT G V+T G+ YGQLG + ++ R +L + V ++ACG H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTS 307
Query: 593 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 627
A + S +Y++G G NG+LG G T +R P V+
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 335 (123.0 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 96/323 (29%), Positives = 146/323 (45%)
Query: 329 WGEELGGRLG-HGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
WG G+LG G+D + V P+ D N V V CG HT V G +YT G C
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG---C 60
Query: 387 N-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
N G LGH E S P+++ L+ ++ +V+CG HT + GQ++ +G + G LG
Sbjct: 61 NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 446 -HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXX 504
G + PR + SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKA------------SEVFCWGQNK 165
Query: 505 XXXXXXXXK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 563
+ + P + +L+ F QV+ G + + LT +G ++ G +GQLG
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN 225
Query: 564 KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 623
N + + L + I CG+ H A LT V+T+G G G+LGH T P
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 624 SLVEALKDKQVKSIVCGTSFTAA 646
V L V + CG T+A
Sbjct: 286 RKVFELMGSIVTQVACGRQHTSA 308
Score = 312 (114.9 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 78/218 (35%), Positives = 112/218 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG DG LG GS ++ VP+ ++S + + +ACG H+ ++K
Sbjct: 105 VYAWG-LDSDGQLG----LQGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKA 155
Query: 324 GEVFSWGEELGGRLGHGVDSDV-SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
EVF WG+ G+LG G+D + P+LI +L I VA G H+ +TLSG ++ WG
Sbjct: 156 SEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Query: 383 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 442
+ FG LG +E ++P L L + + CG HTA +T G +FTFG G +G
Sbjct: 216 RNK--FGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
LGH PR+V L G + ACG HT+A V
Sbjct: 273 QLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFV 310
Score = 304 (112.1 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 87/285 (30%), Positives = 134/285 (47%)
Query: 297 KAVESAVVLDVQNI---ACGGRHAALVTKQGEVFSWGEELGGRLG-HGVDSDVSHPKLID 352
K E V LD QNI ACG H + +G+V++WG + G+LG G + + P+ I
Sbjct: 73 KKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIK 132
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 412
+L +I + VACG +H+ A++ + +++ WG + +G LG G + +L L GI
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK--YGQLGLGIDCQKQTSPQLIKSLLGI 190
Query: 413 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
V+ G H+ V+T +G +F +G FG LG D P + SL+ + V CG
Sbjct: 191 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCG 250
Query: 473 VWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQ 532
HTAA+ + G +FT+ + P V L+ Q
Sbjct: 251 EDHTAALTK------------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 298
Query: 533 VSCGHSLTVALT-TTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEG 575
V+CG T A ++G +Y+ G GQLG +N K P V+G
Sbjct: 299 VACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 266 (98.7 bits), Expect = 6.3e-19, P = 6.3e-19
Identities = 80/275 (29%), Positives = 125/275 (45%)
Query: 378 MYTWGGSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
M WG N ++G LG G + + L + + V V CG HT V G ++T
Sbjct: 1 MLCWG--NASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTC 58
Query: 437 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGK 496
G G LGH S P +V +L V ACG HT A+ + G+
Sbjct: 59 GCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVACGEAHTLALND------------KGQ 104
Query: 497 LFTWXXXXXXXXXXXXKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
++ W E + VP + +L + QV+CG+ ++AL+ V+ G
Sbjct: 105 VYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQN 164
Query: 556 VYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 612
YGQLG D + P ++ L F++ +A G H VLT ++ WG+ G+L
Sbjct: 165 KYGQLGLGIDCQKQTS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQL 222
Query: 613 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
G D +DR P+L+++L+ +++ I CG TAA+
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257
Score = 255 (94.8 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 65/193 (33%), Positives = 102/193 (52%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG+ G LG GI K S P+ ++S + + +A GG H+ ++T
Sbjct: 158 VFCWGQ-NKYGQLGLGIDCQ------KQTS--PQLIKSLLGIPFMQVAAGGAHSFVLTLS 208
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G +F WG G+LG ++D P L+ +L++ + + CGE HT A+T G ++T+G
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGTFG 442
+G LGH + P+K+ L G V+ V+CG HT A V S+G++++FG G G
Sbjct: 269 GG--YGQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 443 VLGHGDRISVSTP 455
LG G + +P
Sbjct: 326 QLGTGSTSNRKSP 338
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 394 (143.8 bits), Expect = 9.2e-33, P = 9.2e-33
Identities = 101/335 (30%), Positives = 162/335 (48%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
P+ + + V+++ CG RH V G V++ G G+LGH + P+ + AL
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD 82
Query: 356 NINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 414
N+ V+CGE HT A+ G +Y WG S+ GLLG +E + +P+ + L I +
Sbjct: 83 AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQI 139
Query: 415 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGV 473
V+CG +H+ ++ A ++F +G +G LG G D ++P+ + SL G+ ++ A G
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGG 199
Query: 474 WHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQV 533
H+ + G +F W + R VP + +L +
Sbjct: 200 AHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYI 247
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHV- 592
CG T ALT G V+T G+ YGQLG + ++ R +L + V +IACG H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Query: 593 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 627
A + S +Y++G G NG+LG G T +R P V+
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 345 (126.5 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 103/326 (31%), Positives = 153/326 (46%)
Query: 329 WGEELGGRLG-HGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
WG G+LG G+D + V P+ D N V V CG HT V G +YT G C
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG---C 60
Query: 387 N-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFG 442
N G LGH E S P+++ L+ ++ +VSCG HT + GQ++ +G DG G
Sbjct: 61 NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXX 502
+LG + I V PR + SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKA------------SEVFCWGQ 163
Query: 503 XXXXXXXXXXK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
+ + P + +L+ F QV+ G + + LT +G ++ G +GQLG
Sbjct: 164 NKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 562 DPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 620
N + +P ++ T+ V I CG+ H A LT V+T+G G G+LGH T
Sbjct: 224 LNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 621 NFPSLVEALKDKQVKSIVCGTSFTAA 646
P V L V I CG T+A
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSA 308
Score = 307 (113.1 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 78/218 (35%), Positives = 112/218 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG DG LG GS ++ VP+ ++S + + +ACG H+ ++K
Sbjct: 105 VYAWG-LDSDGQLG----LLGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKA 155
Query: 324 GEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
EVF WG+ G+LG G+D + P+LI +L I VA G H+ +TLSG ++ WG
Sbjct: 156 SEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Query: 383 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 442
+ FG LG +E ++P L L + + CG HTA +T G +FTFG G +G
Sbjct: 216 RNK--FGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
LGH PR+V L G + ACG HT+A V
Sbjct: 273 QLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 295 (108.9 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 85/285 (29%), Positives = 134/285 (47%)
Query: 297 KAVESAVVLDVQNI---ACGGRHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKLID 352
K E V LD QNI +CG H + +G+V++WG + G+LG G + + P+ I
Sbjct: 73 KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIK 132
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 412
+L +I + VACG +H+ A++ + +++ WG + +G LG G + +L L GI
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK--YGQLGLGIDCKKQASPQLIKSLLGI 190
Query: 413 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
V+ G H+ V+T +G +F +G FG LG D P + SL+ + V CG
Sbjct: 191 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCG 250
Query: 473 VWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQ 532
HTAA+ + G +FT+ + P V L+ Q
Sbjct: 251 EDHTAALTK------------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 298
Query: 533 VSCGHSLTVALT-TTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEG 575
++CG T A ++G +Y+ G GQLG +N K P V+G
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 272 (100.8 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 83/276 (30%), Positives = 128/276 (46%)
Query: 378 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
M WG N +FG LG G +E + P+K + + V V CG HT V G ++T
Sbjct: 1 MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-KVRDVGCGLRHTVFVLDDGTVYT 57
Query: 436 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXG 495
G G LGH S P +V +L V +CG HT A+ + G
Sbjct: 58 CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103
Query: 496 KLFTWXXXXXXXXXXXXKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
+++ W E + VP + +L + QV+CG+ ++AL+ V+ G
Sbjct: 104 QVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 555 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 611
YGQLG D K P ++ L F++ +A G H VLT ++ WG+ G+
Sbjct: 164 NKYGQLGLGIDCKKQAS-PQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 612 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
LG D +DR P+L+++L+ +++ I CG TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257
Score = 252 (93.8 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 64/193 (33%), Positives = 101/193 (52%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG+ G LG GI K S P+ ++S + + +A GG H+ ++T
Sbjct: 158 VFCWGQ-NKYGQLGLGIDCK------KQAS--PQLIKSLLGIPFMQVAAGGAHSFVLTLS 208
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G +F WG G+LG ++D P L+ +L+ + + CGE HT A+T G ++T+G
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGTFG 442
+G LGH + P+K+ L G V+ ++CG HT A V S+G++++FG G G
Sbjct: 269 GG--YGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 443 VLGHGDRISVSTP 455
LG G + +P
Sbjct: 326 QLGTGSTSNRKSP 338
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 394 (143.8 bits), Expect = 9.2e-33, P = 9.2e-33
Identities = 106/356 (29%), Positives = 167/356 (46%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V+++ CG RH V G V++ G G+LGH + P+ + AL N+ V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 367 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 425
HT A+ G +Y WG S+ GL+G +E + +P+ + L I + V+CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 426 VVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
++ A ++F +G +G LG G D ++P+ + SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 485 GXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 544
G +F W + R VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 545 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYT 603
G V+T G+ YGQLG + ++ R +L + V EIACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYS 318
Query: 604 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQS 659
+G G NG+LG G T +R P V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQS 374
Score = 338 (124.0 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 100/325 (30%), Positives = 149/325 (45%)
Query: 329 WGEELGGRLG-HGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
WG G+LG G+D + V P+ D N V V CG HT V G +YT G C
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG---C 60
Query: 387 N-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFG 442
N G LGH E S P+++ L+ ++ +VSCG HT + GQ++ +G DG G
Sbjct: 61 NDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXX 502
++G + I V PR + SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKA------------SEVFCWGQ 163
Query: 503 XXXXXXXXXXK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
+ + P + +L+ F QV+ G + + LT +G ++ G +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 562 DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 621
N + + L + I CG+ H A LT V+T+G G G+LGH T
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 622 FPSLVEALKDKQVKSIVCGTSFTAA 646
P V L V I CG T+A
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSA 308
Score = 303 (111.7 bits), Expect = 6.4e-23, P = 6.4e-23
Identities = 77/218 (35%), Positives = 110/218 (50%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG DG LG GS ++ VP+ ++S + + +ACG H+ ++K
Sbjct: 105 VYAWG-LDSDGQLG----LVGSEECIR----VPRNIKSLSDIQIVQVACGYYHSLALSKA 155
Query: 324 GEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
EVF WG+ G+LG G D + P+L+ +L I VA G H+ +TLSG ++ WG
Sbjct: 156 SEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 215
Query: 383 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 442
+ FG LG +E ++P L L + + CG HTA +T G +FTFG G +G
Sbjct: 216 RNK--FGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
LGH PR+V L G ACG HT+A V
Sbjct: 273 QLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFV 310
Score = 297 (109.6 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 84/285 (29%), Positives = 134/285 (47%)
Query: 297 KAVESAVVLDVQNI---ACGGRHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKLID 352
K E V LD QNI +CG H + +G+V++WG + G+LG G + + P+ I
Sbjct: 73 KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIK 132
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 412
+L +I + VACG +H+ A++ + +++ WG + +G LG G + +L L GI
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK--YGQLGLGTDCKKQTSPQLLKSLLGI 190
Query: 413 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
V+ G H+ V+T +G +F +G FG LG D P + SL+ + V CG
Sbjct: 191 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCG 250
Query: 473 VWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQ 532
HTAA+ + G +FT+ + P V L+ +
Sbjct: 251 EDHTAALTK------------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTE 298
Query: 533 VSCGHSLTVALT-TTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEG 575
++CG T A ++G +Y+ G GQLG +N K P V+G
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 270 (100.1 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 83/276 (30%), Positives = 128/276 (46%)
Query: 378 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
M WG N +FG LG G +E + P+K + + V V CG HT V G ++T
Sbjct: 1 MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFINK-RVRDVGCGLRHTVFVLDDGTVYT 57
Query: 436 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXG 495
G G LGH S P +V +L V +CG HT A+ + G
Sbjct: 58 CGCNDLGQLGHEK--SRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KG 103
Query: 496 KLFTWXXXXXXXXXXXXKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
+++ W E + VP + +L + QV+CG+ ++AL+ V+ G
Sbjct: 104 QVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ 163
Query: 555 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 611
YGQLG D K P ++ L F++ +A G H VLT ++ WG+ G+
Sbjct: 164 NKYGQLGLGTDCKKQTS-PQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 612 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
LG D +DR P+L+++L+ +++ I CG TAA+
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257
Score = 247 (92.0 bits), Expect = 7.0e-17, P = 7.0e-17
Identities = 63/193 (32%), Positives = 101/193 (52%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG+ G LG G K S P+ ++S + + +A GG H+ ++T
Sbjct: 158 VFCWGQ-NKYGQLGLGTDCK------KQTS--PQLLKSLLGIPFMQVAAGGAHSFVLTLS 208
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G +F WG G+LG ++D P L+ +L++ + + CGE HT A+T G ++T+G
Sbjct: 209 GAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGTFG 442
+G LGH + P+K+ L G V+ ++CG HT A V S+G++++FG G G
Sbjct: 269 GG--YGQLGHNSTSHEINPRKVF-ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 443 VLGHGDRISVSTP 455
LG G + +P
Sbjct: 326 QLGTGSTSNRKSP 338
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 445 (161.7 bits), Expect = 1.6e-32, Sum P(4) = 1.6e-32
Identities = 118/386 (30%), Positives = 181/386 (46%)
Query: 267 WGECTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGE 325
WG + I G G + G G++ P E+ +L +A G + VT G+
Sbjct: 4045 WGGAST--IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGK 4102
Query: 326 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG- 382
+F+ G GGRLG G + P L+ +L+++ V+ VA G H A+T G++Y WG
Sbjct: 4103 LFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGE 4162
Query: 383 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 442
G + G LGHGN MS PK + L G+ V+ ++CG H+A +T++G + T+G G +G
Sbjct: 4163 GED---GKLGHGNRMSYDRPKLVEH-LNGMSVADIACGSAHSAAITASGHVLTWGKGRYG 4218
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXX 502
LGHGD P+ V++L G R + ACG + +++W
Sbjct: 4219 RLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC----------ITDDDNVWSWGD 4268
Query: 503 XXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 562
+ +P + +L +V CG +VALT +G VYT G + +LG
Sbjct: 4269 GDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGH 4328
Query: 563 PKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 621
+ + P +V K + IA G H + EVYTWG G+LG G
Sbjct: 4329 GSVDHVRRPKKVAALQGKKIIS-IATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4387
Query: 622 FPSLVEALKDKQVKSIVCGTSFTAAI 647
P LV AL+ K + + CG++ T A+
Sbjct: 4388 RPRLVAALQGKHIVKVTCGSAHTLAL 4413
Score = 410 (149.4 bits), Expect = 1.1e-29, Sum P(3) = 1.1e-29
Identities = 119/384 (30%), Positives = 181/384 (47%)
Query: 270 CTGDGILGGGIHRSGSYAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFS 328
CT ++ G++ G+K VP ++ L +IA G + +V++ G+V++
Sbjct: 2986 CT---VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYA 3042
Query: 329 WGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--GEHHTCAVTLSGDMYTWG-GSN 385
GE GRLG GV +V P + L+ V+ VA G H A+TL G +++WG G +
Sbjct: 3043 CGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGED 3102
Query: 386 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
G LGHGN +L P+ + L + V+CG H+A ++S G+L+T+G G +G LG
Sbjct: 3103 ---GKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG 3158
Query: 446 HGDRISVSTPREVDSLKGLRTVRAACGVW--HTAAVVEVMVGXXXXXXXXXGKLFTWXXX 503
HGD + P+ V +L G R V+ ACG T A+ E G +F+W
Sbjct: 3159 HGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTE------------DGAVFSWGDG 3206
Query: 504 XXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 563
E P + L Q+ CG ++ALT G V+T G Y +LG
Sbjct: 3207 DFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3266
Query: 564 -KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 622
+ + P + G L V +A G H +T +VY WG +G+ G G+T
Sbjct: 3267 GDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKK 3325
Query: 623 PSLVEALKDKQVKSIVCGTSFTAA 646
P+LV L V + CG+S + A
Sbjct: 3326 PALVIGLDAVFVNRVACGSSHSIA 3349
Score = 381 (139.2 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 106/331 (32%), Positives = 155/331 (46%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ GE T +G LG G+ + V + +P + VV V + GG+HA +T
Sbjct: 3040 VYACGEGT-NGRLGLGVTHN-----VPLPHQLP-VLRQYVVKKVA-VHSGGKHALALTLD 3091
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G+VFSWGE G+LGHG + + P+L++AL+ + VACG H+ A++ G++YTWG
Sbjct: 3092 GKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGL 3151
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTF 441
+G LGHG+ + PK + L G V V+CG T +T G +F++GDG F
Sbjct: 3152 GE--YGRLGHGDNTTQLKPKLVTA-LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDF 3208
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
G LG G TP E++ L G+ V+ CG + A+ G+++TW
Sbjct: 3209 GKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRA------------GEVWTWG 3256
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
+ P + L V+ G +A+T G VY G +GQ G
Sbjct: 3257 KGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3316
Query: 562 DPKAN-GKLPTRVEGKLTKNFVEEIACGDYH 591
K P V G L FV +ACG H
Sbjct: 3317 SGNTFVNKKPALVIG-LDAVFVNRVACGSSH 3346
Score = 380 (138.8 bits), Expect = 1.8e-25, Sum P(4) = 1.8e-25
Identities = 101/333 (30%), Positives = 153/333 (45%)
Query: 271 TGDGILGGGIHRSGSYAGVK-MDSF-VPKAVESAVVLDVQNIAC--GGRHAALVTKQGEV 326
T DG L + SG GV DS+ +P + S + V+ +A GG+H +T +GEV
Sbjct: 4098 TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEV 4157
Query: 327 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
++WGE G+LGHG PKL++ L ++V +ACG H+ A+T SG + TWG
Sbjct: 4158 YAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGR- 4216
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW--HTAVVTSAGQLFTFGDGTFGVL 444
+G LGHG+ PK + L G ++CG T +T ++++GDG +G L
Sbjct: 4217 -YGRLGHGDSEDQLRPKLVEALL-GYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL 4274
Query: 445 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXX 504
G G P +++SL GL V+ CG + A+ + G ++TW
Sbjct: 4275 GRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTK------------SGAVYTWGKGD 4322
Query: 505 XXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 564
+ P VAAL ++ G VA + +G VYT G GQLGD
Sbjct: 4323 FHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGT 4382
Query: 565 ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
R+ L + ++ CG H L++
Sbjct: 4383 VTAIQRPRLVAALQGKHIVKVTCGSAHTLALST 4415
Score = 350 (128.3 bits), Expect = 2.9e-22, Sum P(4) = 2.9e-22
Identities = 96/285 (33%), Positives = 140/285 (49%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WGE DG LG G +R SY D PK VE + V +IACG H+A +T
Sbjct: 4157 VYAWGEGE-DGKLGHG-NRM-SY-----DR--PKLVEHLNGMSVADIACGSAHSAAITAS 4206
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMYTW 381
G V +WG+ GRLGHG D PKL++AL +ACG + T +T ++++W
Sbjct: 4207 GHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSW 4266
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G + +G LG G LP K+ L G+ V V CG + +T +G ++T+G G F
Sbjct: 4267 GDGD--YGKLGRGGSDGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDF 4323
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWX 501
LGHG V P++V +L+G + + A G H A + G+++TW
Sbjct: 4324 HRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSD------------SGEVYTWG 4371
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
A P VAAL + +V+CG + T+AL+T+
Sbjct: 4372 DNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4416
Score = 314 (115.6 bits), Expect = 2.3e-19, Sum P(4) = 2.3e-19
Identities = 102/333 (30%), Positives = 152/333 (45%)
Query: 326 VFSWG----EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 381
V WG E+LGG G S V P + + +A G V+ G +Y
Sbjct: 2988 VMVWGLNDKEQLGGLKG----SKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYAC 3043
Query: 382 G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS---SVSCGPWHTAVVTSAGQLFTFG 437
G G+N G LG G ++ LP +L P+ +V +V G H +T G++F++G
Sbjct: 3044 GEGTN---GRLGLGVTHNVPLPHQL--PVLRQYVVKKVAVHSGGKHALALTLDGKVFSWG 3098
Query: 438 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKL 497
+G G LGHG+R ++ PR V++L+ + ACG H+AA+ G+L
Sbjct: 3099 EGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI------------SSQGEL 3146
Query: 498 FTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGH--SLTVALTTTGHVYTMGSP 555
+TW +L P V AL QV+CG + T+ALT G V++ G
Sbjct: 3147 YTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDG 3206
Query: 556 VYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 614
+G+LG + G P +E +L+ V +I CG LT EV+TWGKG RLGH
Sbjct: 3207 DFGKLGRGGSEGSDTPHEIE-RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3265
Query: 615 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
G P + L+ ++V + G A+
Sbjct: 3266 GGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAV 3298
Score = 241 (89.9 bits), Expect = 9.8e-12, Sum P(4) = 9.8e-12
Identities = 89/280 (31%), Positives = 121/280 (43%)
Query: 430 AGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXX 487
A ++ +G G LG G RI TP E SL LR V+ A G AV
Sbjct: 4048 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSL--LRPVQLAGGEQSLFAVTP------ 4099
Query: 488 XXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAAL--VEPNFCQVSCGHSLTVALTT 545
GKLF ++ +PT + +L V V+ G +ALTT
Sbjct: 4100 ------DGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4153
Query: 546 TGHVYTMGSPVYGQLGDP-KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 604
G VY G G+LG + + P VE L V +IACG H A +T+ V TW
Sbjct: 4154 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITASGHVLTW 4212
Query: 605 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLH------KWVSG--- 655
GKG GRLGHGD++D+ P LVEAL + I CG+ +C+ W G
Sbjct: 4213 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYG 4272
Query: 656 -VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSV 694
+ + GC++P+ K + G+V C S+ SV
Sbjct: 4273 KLGRGGSDGCKLPY----KIESLAGLGVVKVE-CGSQFSV 4307
Score = 224 (83.9 bits), Expect = 7.2e-27, Sum P(2) = 7.2e-27
Identities = 69/245 (28%), Positives = 108/245 (44%)
Query: 312 CGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA 371
C GRH + +SWG RLGHG + P I AL+ V+ V CG ++ A
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAA 682
Query: 372 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS-SVSCGPWHTAVVTSA 430
+T G++ TWG + LGHGN LP + + + V ++ G H+ +TS
Sbjct: 683 ITCGGNLLTWGRGT--YARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 740
Query: 431 GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXX 490
G +F +GDG +G LG+G+ P V+SL R R G + A+
Sbjct: 741 GLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVAL----------- 787
Query: 491 XXXXGKLFTWXXXXXXXXXXXXKEAR--LVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 548
G+L+TW + + VP V++L V+ + +AL+++G
Sbjct: 788 -SSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGE 846
Query: 549 VYTMG 553
V+ G
Sbjct: 847 VFGWG 851
Score = 207 (77.9 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 69/245 (28%), Positives = 102/245 (41%)
Query: 364 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 423
C H A+ + + Y+WG + LGHG+ + +P K+ LE V SV CG +
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDH--RLGHGDTHARAVPTKI-AALEQHCVQSVYCGCSY 679
Query: 424 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 483
+A +T G L T+G GT+ LGHG+ S P V +L V A G ++
Sbjct: 680 SAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLA--- 736
Query: 484 VGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 543
G +F W L P V +L P +V G +VAL
Sbjct: 737 -------LTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSVAL 787
Query: 544 TTTGHVYTMGSPV-YG-QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 601
++ G +YT G G QL + G R+ L + ++A H L+S EV
Sbjct: 788 SSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEV 847
Query: 602 YTWGK 606
+ WG+
Sbjct: 848 FGWGR 852
Score = 206 (77.6 bits), Expect = 3.4e-23, Sum P(3) = 3.4e-23
Identities = 73/214 (34%), Positives = 101/214 (47%)
Query: 278 GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
G HR G G VP + + VQ++ CG ++A +T G + +WG RL
Sbjct: 643 GEDHRLGH--GDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARL 700
Query: 338 GHGVDSDVSHPKLIDALKNINVELVACG--EHHTCAVTLSGDMYTWGGSNCNFGLLGHGN 395
GHG D S P L+ AL + V VA G + H+ A+T G ++ WG + +G LG+GN
Sbjct: 701 GHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGD--YGKLGNGN 758
Query: 396 EMSLWLPKKLNGPLEGIHVSS------VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-- 447
NG L+ I V S V G + ++S GQL+T+G T LGH
Sbjct: 759 ---------CNGSLQPILVESLPRVQRVFAGSQFSVALSSEGQLYTWGKAT--CLGHQLV 807
Query: 448 DRI--SVSTPREVDSLKGLRTVRAACGVWHTAAV 479
+R S PR V SL+ R V A V H A+
Sbjct: 808 ERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLAL 841
Score = 199 (75.1 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 64/214 (29%), Positives = 101/214 (47%)
Query: 498 FTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 557
++W AR VPT +AAL + V CG S + A+T G++ T G Y
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTY 697
Query: 558 GQLGDPKANGK-LPTRVEGKLTKNFVEEIACG--DYHVAVLTSRTEVYTWGKGANGRLGH 614
+LG ++ + LPT V L+ + V ++A G D H LTS V+ WG G G+LG+
Sbjct: 698 ARLGHGNSDDRSLPTLVVA-LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN 756
Query: 615 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG-------VDQSMCSG 663
G+ + P LVE+L +V+ + G+ F+ A+ L+ W V++S+ G
Sbjct: 757 GNCNGSLQPILVESLP--RVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSV-QG 813
Query: 664 CRIP---FNFKRKRHNCYNCGLVYCHTCSSKKSV 694
C +P + + KR + +C SS V
Sbjct: 814 CSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEV 847
Score = 187 (70.9 bits), Expect = 7.2e-27, Sum P(2) = 7.2e-27
Identities = 43/118 (36%), Positives = 61/118 (51%)
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDP-KANGKLPTRVEGKLTKNFVEEIACGDYH 591
V G +ALT G V++ G G+LG + P VE K + ++ACG H
Sbjct: 3078 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKK-IRDVACGSSH 3136
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 649
A ++S+ E+YTWG G GRLGHGD + P LV AL ++V + CG+ + L
Sbjct: 3137 SAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLAL 3194
Score = 166 (63.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 44/158 (27%), Positives = 78/158 (49%)
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVS--CGHSLTVALTTTGHVYTM 552
GKL+TW EA +P + + F ++ C +A+ + + Y+
Sbjct: 591 GKLYTWRLAK--------PEAEPLP--MEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSW 640
Query: 553 GSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 611
G+ +LG + + +PT++ L ++ V+ + CG + A +T + TWG+G R
Sbjct: 641 GTGEDHRLGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYAR 699
Query: 612 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 649
LGHG++DDR+ P+LV AL D V + G+ ++ L
Sbjct: 700 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLAL 737
Score = 153 (58.9 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 46/167 (27%), Positives = 78/167 (46%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACG 365
++ +AC +++++G++++W L + +V+H I + C
Sbjct: 574 IKQVACCETQMLILSQEGKLYTW--RLAKPEAEPLPMEEVAHDVFISIAGH-------CE 624
Query: 366 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 425
H A+ + + Y+WG + LGHG+ + +P K+ LE V SV CG ++A
Sbjct: 625 GRHFLAIDSNHNAYSWGTGEDH--RLGHGDTHARAVPTKI-AALEQHCVQSVYCGCSYSA 681
Query: 426 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
+T G L T+G GT+ LGHG+ S P V +L V A G
Sbjct: 682 AITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALG 728
Score = 152 (58.6 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 41/118 (34%), Positives = 60/118 (50%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIA--CGD 589
QV+C + + L+ G +YT +L P+A P +E F+ IA C
Sbjct: 576 QVACCETQMLILSQEGKLYTW------RLAKPEAE---PLPMEEVAHDVFIS-IAGHCEG 625
Query: 590 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
H + S Y+WG G + RLGHGDT R P+ + AL+ V+S+ CG S++AAI
Sbjct: 626 RHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 683
Score = 86 (35.3 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 33/114 (28%), Positives = 51/114 (44%)
Query: 559 QLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT 617
QLG K + K+PT + +++ IA G + +++ +VY G+G NGRLG G T
Sbjct: 2998 QLGGLKGSKVKVPTFSQ-TISRLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVT 3056
Query: 618 DDRNFPSLVEALKDKQVKSIVC--GTSFTAAICLH----KWVSGVDQSMCSGCR 665
+ P + L+ VK + G A+ L W G D + G R
Sbjct: 3057 HNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR 3110
Score = 71 (30.1 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 29/121 (23%), Positives = 53/121 (43%)
Query: 359 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 418
++ VAC E ++ G +YTW + L E++ + + G EG H ++
Sbjct: 574 IKQVACCETQMLILSQEGKLYTWRLAKPEAEPLPM-EEVAHDVFISIAGHCEGRHFLAID 632
Query: 419 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 478
H A +++G G LGHGD + + P ++ +L+ CG ++AA
Sbjct: 633 SN--HNA--------YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAA 682
Query: 479 V 479
+
Sbjct: 683 I 683
Score = 60 (26.2 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 295 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG 330
VP+ V S + ++A H ++ GEVF WG
Sbjct: 816 VPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWG 851
Score = 50 (22.7 bits), Expect = 2.3e-19, Sum P(4) = 2.3e-19
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 272 GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 331
G+G GG +H G + + DS V K S L ++A + + + G + WG+
Sbjct: 1886 GEGATGGQVH--GELSILYEDS-VLKQKSSKAQLSGPDLAKLMKIGTRIVR-GADWKWGD 1941
Query: 332 ELGGRLGHG-VDSDV 345
+ G G G + S+V
Sbjct: 1942 QDGNPPGEGRIISEV 1956
Score = 41 (19.5 bits), Expect = 1.6e-32, Sum P(4) = 1.6e-32
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 182 SPPKNVLDKALSDAVLYAAPPKVLLPSESACGSVNSLSS 220
S P L +L D+ L P VLL SA + + L +
Sbjct: 3772 SQPSMALVMSLLDSRLAPRQPSVLLRLASALAACSQLGA 3810
Score = 41 (19.5 bits), Expect = 1.6e-32, Sum P(4) = 1.6e-32
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 102 DLICKDKDEAEVWFTGLKALISRSHYRKGRAESRSDEVSSVATSPRAHTQ 151
+L C+ D++ + GL+ L + + + + E+RS S +T+ T+
Sbjct: 1411 ELQCRQLDKSSLLSGGLQLLQPSNPFDEEKGEARSSH-SCHSTAGNTPTE 1459
Score = 39 (18.8 bits), Expect = 3.4e-23, Sum P(3) = 3.4e-23
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 517 LVPTCVAALVEPNFCQVSC 535
L+P CVA L + + + C
Sbjct: 1168 LIPACVATLQKAHELALQC 1186
Score = 37 (18.1 bits), Expect = 1.6e-32, Sum P(4) = 1.6e-32
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 21 ALKKGAHLLKYGRRGKPKFCPFRLAND 47
AL + +GR + CP ++++
Sbjct: 840 ALSSSGEVFGWGRNDSQQICPASVSSE 866
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 401 (146.2 bits), Expect = 2.8e-32, Sum P(2) = 2.8e-32
Identities = 109/347 (31%), Positives = 170/347 (48%)
Query: 288 GVKMDSFVPKAVESAVVLD--VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 345
G + +P+ + D V+ +ACGG H+ + + GEV++ G G+LGH +S+
Sbjct: 15 GSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--ESEG 72
Query: 346 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSL-WLPK 403
S P + L ++ VACGE H+ A++ G +++WG GS+ GL + +++ L K
Sbjct: 73 SKPAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIK 132
Query: 404 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLK 462
KLN + +SCG WH + + GQ FT+G ++G LG G S ++P+ V SL
Sbjct: 133 KLNQQT----ILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLD 188
Query: 463 GLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCV 522
G+ + A G H+ A+ G +F W + R P V
Sbjct: 189 GIPLAQVAAGGAHSFAL------------SLSGAVFGWGKNSSGQLGLSDERDRESPCHV 236
Query: 523 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNF 581
L +SCG T LT +G V+T G+ GQLG N ++ P RV +L +
Sbjct: 237 KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSE 295
Query: 582 VEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 627
V +IACG +H +A + S +Y +G G G+LG G T + PS V+
Sbjct: 296 VSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 326 (119.8 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 100/325 (30%), Positives = 153/325 (47%)
Query: 329 WGEELGGRLGHGVDSDV--SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
WG G+ G G + V P++ + + NV+ VACG +H+ + G++YT G N
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 387 NFGLLGHGNEMS--LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 444
G LGH +E S W+ G L G H+ V+CG H+ ++ GQ+F++G G+ G L
Sbjct: 63 K-GQLGHESEGSKPAWV-----GTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQL 116
Query: 445 GHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXX 503
G +V+ PR + L ++ +CG WH A+ G+ FTW
Sbjct: 117 GLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA------------ADGQFFTWGQN 164
Query: 504 XXXXXXXXXK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG- 561
+ ++ P V +L QV+ G + + AL+ +G V+ G GQLG
Sbjct: 165 SYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGL 224
Query: 562 DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN 621
+ + + P V+ L V I+CG+ H AVLT V+T+G G+ G+LGH +D
Sbjct: 225 SDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEV 283
Query: 622 FPSLVEALKDKQVKSIVCGTSFTAA 646
P V L +V I CG T A
Sbjct: 284 NPRRVLELMGSEVSQIACGRHHTLA 308
Score = 284 (105.0 bits), Expect = 7.1e-21, P = 7.1e-21
Identities = 83/274 (30%), Positives = 129/274 (47%)
Query: 378 MYTWGGSNCNFGLLGHGNEMSLWLPK-KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
M WG S+ FG G G+ + + +P+ ++ G + +V V+CG H+ + G+++T
Sbjct: 1 MLCWGYSS--FGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTC 58
Query: 437 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGK 496
G T G LGH S P V +L G V ACG H+ A+ + G+
Sbjct: 59 GLNTKGQLGHESE--GSKPAWVGTLAGQHIVHVACGESHSVALSD------------QGQ 104
Query: 497 LFTWXXXXXXXXXXXX-KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
+F+W ++A VP + L + Q+SCG+ +AL G +T G
Sbjct: 105 VFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQN 164
Query: 556 VYGQLGDPKA--NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 613
YGQLG K + P RV+ L + ++A G H L+ V+ WGK ++G+LG
Sbjct: 165 SYGQLGLGKECPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223
Query: 614 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
D DR P V+ L+ ++V I CG TA +
Sbjct: 224 LSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Score = 264 (98.0 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 72/218 (33%), Positives = 105/218 (48%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG DG LG ++ VP+ ++ + I+CG H +
Sbjct: 105 VFSWG-AGSDGQLG--------LTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAAD 155
Query: 324 GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G+ F+WG+ G+LG G + + P+ + +L I + VA G H+ A++LSG ++ WG
Sbjct: 156 GQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWG 215
Query: 383 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 442
++ G LG +E P + L V +SCG HTAV+T +G +FTFG G+ G
Sbjct: 216 KNSS--GQLGLSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
LGH PR V L G + ACG HT A V
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFV 310
Score = 40 (19.1 bits), Expect = 2.8e-32, Sum P(2) = 2.8e-32
Identities = 10/57 (17%), Positives = 22/57 (38%)
Query: 611 RLGHGDTDDRNF---PSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGC 664
R +G T+ +N ++ KD + K + ++ +H+W + C
Sbjct: 861 RESYGVTEHKNLIEDGDKIQVQKDNREKFVEAYVNYIFNCSIHEWYTAFSTGFLKVC 917
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 403 (146.9 bits), Expect = 3.5e-32, Sum P(2) = 3.5e-32
Identities = 108/325 (33%), Positives = 166/325 (51%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V+ +ACGG H+ + + GEV++ G G+LGH + + + P+ I AL + ++ VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93
Query: 367 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 425
H+ A++ G +++WG GS+ GL+ E S+ +P+ + L + VSCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 426 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
+ + GQ FT+G + G LG G S ++P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 485 GXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 544
G +F W +E R P V L +SCG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 545 TTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVY 602
+G V+T G+ GQLG N ++ P RV +L + V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 603 TWGKGANGRLGHGDTDDRNFPSLVE 627
+G GA G+LG G T + PS V+
Sbjct: 318 AFGCGAKGQLGTGHTCNVKCPSPVK 342
Score = 319 (117.4 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 98/323 (30%), Positives = 154/323 (47%)
Query: 329 WGEELGGRLGHGVDSD--VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
WG G+ G + V+ P++ + + +V+ VACG +H+ + G++YT G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG- 445
G LGH E + P+++ G L H+ V+CG H+ ++ GQLF++G G+ G LG
Sbjct: 63 K-GQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 446 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXX 505
SV+ PR + L ++ +CG WH A+ G+ FTW
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSH 166
Query: 506 XXXXXXXK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DP 563
+ ++ P V +L QV+ G + + AL+ +G V+ G GQLG
Sbjct: 167 GQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 564 KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 623
+ + + P V+ T+ V I+CG+ H AVLT V+T+G G+ G+LGH +D P
Sbjct: 227 EEDRESPCHVKLLRTQKVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 624 SLVEALKDKQVKSIVCGTSFTAA 646
V L +V I CG T A
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLA 308
Score = 291 (107.5 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 84/301 (27%), Positives = 139/301 (46%)
Query: 279 GIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG 338
G++ G G + + P+ + + + ++ACG H+ ++ +G++FSWG G+LG
Sbjct: 59 GLNTKGQL-GHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG 117
Query: 339 HGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM 397
D V+ P+LI L + V+CG H A+ G +TWG ++ G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS--HGQLGLGKEY 175
Query: 398 -SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPR 456
S P+++ LEGI ++ V+ G H+ ++ +G +F +G G LG D +P
Sbjct: 176 PSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 457 EVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEAR 516
V L+ + V +CG HTA + + G +FT+
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDE 282
Query: 517 LVPTCVAALVEPNFCQVSCGHSLTVALT-TTGHVYTMGSPVYGQLGDPKA-NGKLPTRVE 574
+ P V L+ Q++CG T+A ++G +Y G GQLG N K P+ V+
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVK 342
Query: 575 G 575
G
Sbjct: 343 G 343
Score = 237 (88.5 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 71/237 (29%), Positives = 107/237 (45%)
Query: 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 473
V V+CG H+ + G+++T G T G LGH +R + P ++ +L V ACG
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREG-NKPEQIGALADQHIVHVACGE 93
Query: 474 WHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARL-VPTCVAALVEPNFCQ 532
H+ A+ + G+LF+W E + VP + L + Q
Sbjct: 94 SHSLALSD------------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA--NGKLPTRVEGKLTKNFVEEIACGDY 590
VSCG+ +AL G +T G +GQLG K + P RV L + ++A G
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRS-LEGIPLAQVAAGGA 200
Query: 591 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
H L+ V+ WG G+LG D +DR P V+ L+ ++V I CG TA +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVL 257
Score = 37 (18.1 bits), Expect = 3.5e-32, Sum P(2) = 3.5e-32
Identities = 7/39 (17%), Positives = 15/39 (38%)
Query: 626 VEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGC 664
V KD + + + ++ I +H+W + C
Sbjct: 879 VTVCKDNRQEFVDAYVNYVFQISVHEWYTAFSSGFLKVC 917
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 385 (140.6 bits), Expect = 3.9e-32, Sum P(3) = 3.9e-32
Identities = 114/342 (33%), Positives = 168/342 (49%)
Query: 310 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 369
I+CG H ALVT+ G++F +G G+LG G + V+ P + ALK+ V+L ACG HT
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100
Query: 370 CAVTLSGDMYTWGGSNCNFGLLGHGN---EMSLWLPKKLN--GPLEGIHVSSVSCGPWHT 424
T G++Y GG+N G LG G+ S L + N GP++ ++ G +
Sbjct: 101 LVFTSRGNLYACGGNN--EGQLGLGDCNDRTSFHLVEFFNKQGPIK-----MLAAGSNTS 153
Query: 425 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
A +T G+L+ +GD + G +G G + TP+EV G R +CG +H+A V
Sbjct: 154 AALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVT---- 207
Query: 485 GXXXXXXXXXGKLFTWXXXXXXXXXXXXKEA--RLVPTCVAALVEPNFCQVSCGHSLTVA 542
G L+T+ ++ VP V + + QV+CG TVA
Sbjct: 208 --------VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVA 258
Query: 543 LTTTGHVYTMGSPVYGQLGDPKA--NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 600
LT VY+ G +GQLG +LP VE K V+ ACG+ H A++T
Sbjct: 259 LTEN-EVYSFGLGQFGQLGHGTFIFESRLPRVVE-HFRKGRVKHAACGENHTALITDNGL 316
Query: 601 VYTWGKGANGRLGHGDTDDRN-F-PSLVEALKDKQVKSIVCG 640
+YT+G G +G+LG G+ + N F P+L D V S+ CG
Sbjct: 317 LYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358
Score = 283 (104.7 bits), Expect = 4.4e-21, Sum P(3) = 4.4e-21
Identities = 92/299 (30%), Positives = 139/299 (46%)
Query: 354 LKNINVEL-VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 412
LKN +V L ++CG+ HT VT +G ++ +G SN N+G LG G + ++ P + L+
Sbjct: 33 LKN-DVPLRISCGDEHTALVTENGKLFMFG-SN-NWGQLGLGTKTTVNKPTCVKA-LKSE 88
Query: 413 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
V +CG HT V TS G L+ G G LG GD ++ V+ ++
Sbjct: 89 RVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAA 148
Query: 473 VWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQ 532
+T+A + G+L+ W + L P V+ V
Sbjct: 149 GSNTSAAL-----------TQDGRLYMWGDNSEGQIGLGKESNALTPQEVS--VGKRVFW 195
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGD 589
VSCG+ + +T G +YT G G+LG + AN K+P +V + V ++ACG
Sbjct: 196 VSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTD--IPDRVVQVACGG 253
Query: 590 YHVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
H LT EVY++G G G+LGHG + P +VE + +VK CG + TA I
Sbjct: 254 GHTVALTEN-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALI 311
Score = 263 (97.6 bits), Expect = 6.2e-19, Sum P(3) = 6.2e-19
Identities = 90/319 (28%), Positives = 147/319 (46%)
Query: 288 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 347
G K P V++ V+ ACG H + T +G +++ G G+LG G +D +
Sbjct: 71 GTKTTVNKPTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTS 130
Query: 348 PKLIDAL-KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 406
L++ K ++++A G + + A+T G +Y WG ++ G +G G E + P++++
Sbjct: 131 FHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNS--EGQIGLGKESNALTPQEVS 188
Query: 407 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRISV-STPREVDSLKGL 464
G V VSCG +H+A VT G L+TFG+ G LG ++++ P++V +
Sbjct: 189 ---VGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD- 244
Query: 465 RTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAA 524
R V+ ACG HT A+ E V G+L E+RL P V
Sbjct: 245 RVVQVACGGGHTVALTENEV--YSFGLGQFGQL---------GHGTFIFESRL-PRVVEH 292
Query: 525 LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN--GKLPTRVEGKLTKNFV 582
+ +CG + T +T G +YT G +G+LG + N + + + V
Sbjct: 293 FRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHV 352
Query: 583 EEIACGDYHVAVLTS-RTE 600
+ CG H+ VL RTE
Sbjct: 353 HSVTCGGCHMLVLAKPRTE 371
Score = 216 (81.1 bits), Expect = 6.2e-14, Sum P(3) = 6.2e-14
Identities = 61/188 (32%), Positives = 102/188 (54%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
+++WG+ +G +G G + ++ P+ V +V V ++CG H+A VT
Sbjct: 162 LYMWGD-NSEGQIG---------LGKESNALTPQEV--SVGKRVFWVSCGYYHSAFVTVD 209
Query: 324 GEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 381
G ++++GE+ G+LG + +H P+ + + + V+ VACG HT A+T ++Y++
Sbjct: 210 GALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ-VACGGGHTVALT-ENEVYSF 267
Query: 382 GGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 440
G FG LGHG + LP+ + +G V +CG HTA++T G L+TFGDG
Sbjct: 268 GLGQ--FGQLGHGTFIFESRLPRVVEHFRKG-RVKHAACGENHTALITDNGLLYTFGDGR 324
Query: 441 FGVLGHGD 448
G LG G+
Sbjct: 325 HGKLGLGE 332
Score = 57 (25.1 bits), Expect = 3.9e-32, Sum P(3) = 3.9e-32
Identities = 12/52 (23%), Positives = 24/52 (46%)
Query: 747 GENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNA 798
G + H + S + +KK + +++N++ E R++G P G A
Sbjct: 613 GSKSLKLKHTELMESSDKVKKQSTEKTQQNQEVEVQRSKGTSKPTQEGTGKA 664
Score = 51 (23.0 bits), Expect = 3.9e-32, Sum P(3) = 3.9e-32
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 1001 EATTKNKNRTM-KAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRK 1051
+ T+KN + K + +GD + + E ++ G KDLK + +++
Sbjct: 702 DLTSKNSKEVLPKVQKVKGDTKIAETENKSFVPQSKKSGSEKDLKSSKTTKE 753
Score = 47 (21.6 bits), Expect = 4.3e-31, Sum P(3) = 4.3e-31
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 871 KLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMA 929
K++ Q E T+++Q E+E++R+ K E T K +A KD + +QL+++A
Sbjct: 630 KVKKQSTEKTQQNQ--EVEVQRSKGTSKPTQ----EGTGKAKA-KDHQLEVKSQLQNVA 681
Score = 46 (21.3 bits), Expect = 1.3e-31, Sum P(3) = 1.3e-31
Identities = 30/148 (20%), Positives = 55/148 (37%)
Query: 880 TRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRN 939
T+KS+ ++ ++E ++ K V E + +A ++S Q+KD ++
Sbjct: 770 TKKSRAEQRQVEDKLKKTKMVPTVVSEAASVSESA---LESEENQMKDNPLTKVTSLLQG 826
Query: 940 SNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPXXXXXXXXXXXXDFGDNRSPSQTEASH 999
S+ V+S + Q S+P + + D Q EA
Sbjct: 827 MGMGGSALLVGEAVASQLLSQ-STPQEMPKPLSRQRTLSDVSSLSESYD--VSGQEEARE 883
Query: 1000 CEATTKNKNRTMKAEPAQGDEWVEQDET 1027
E T N +KA+P D E+ +
Sbjct: 884 AERTAVTIN--VKADPDTSDRDTERSRS 909
Score = 44 (20.5 bits), Expect = 8.8e-31, Sum P(3) = 8.8e-31
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 862 AKRTSEEVIKLRAQVEELTRKSQLQEI 888
+K T E K +A+ +L KSQLQ +
Sbjct: 654 SKPTQEGTGKAKAKDHQLEVKSQLQNV 680
Score = 42 (19.8 bits), Expect = 3.4e-31, Sum P(3) = 3.4e-31
Identities = 36/179 (20%), Positives = 64/179 (35%)
Query: 853 ASPKIVVDDAKRTS--EEVIKLRAQVEELTRKS---QLQEIELERTTRQLKEALAVAGEE 907
A + V D K+T V+ A V E +S Q+++ L + T L + + + G
Sbjct: 775 AEQRQVEDKLKKTKMVPTVVSEAASVSESALESEENQMKDNPLTKVT-SLLQGMGMGGSA 833
Query: 908 TAKCRA-AKDVIKSLTAQL--KDMAEMLPVGAVRN-SNSFH-SSPTPAWDVSSAA--IEQ 960
A A ++ T Q K ++ + V + S S+ S A + A I
Sbjct: 834 LLVGEAVASQLLSQSTPQEMPKPLSRQRTLSDVSSLSESYDVSGQEEAREAERTAVTINV 893
Query: 961 PSSPLTFQGAIPXXXXXXXXXXXXDFGD-NRSPSQTEASHCEATTKNKNRTMKAEPAQG 1018
+ P T + G NR +++ E + ++ T E + G
Sbjct: 894 KADPDTSDRDTERSRSESKTDAHSEMGTYNRKEEESDEEESEGSVNERDETEDVEESDG 952
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 399 (145.5 bits), Expect = 9.6e-32, Sum P(2) = 9.6e-32
Identities = 107/325 (32%), Positives = 166/325 (51%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V+ +ACGG H+ + + GEV++ G G+LGH + + + P+ I AL + ++ VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93
Query: 367 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 425
H+ A++ G +++WG GS+ GL+ E S+ +P+ + L + VSCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMT--TEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 426 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
+ + GQ FT+G + G LG G S ++P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 485 GXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 544
G +F W ++ R P V L +SCG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 545 TTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVY 602
+G V+T G+ GQLG N ++ P RV +L + V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 603 TWGKGANGRLGHGDTDDRNFPSLVE 627
+G GA G+LG G T + PS V+
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 319 (117.4 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 98/323 (30%), Positives = 154/323 (47%)
Query: 329 WGEELGGRLGHGVDSD--VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
WG G+ G + V+ P++ + + +V+ VACG +H+ + G++YT G N
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG-LNT 62
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG- 445
G LGH E + P+++ G L H+ V+CG H+ ++ GQLF++G G+ G LG
Sbjct: 63 K-GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 446 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXX 505
SV+ PR + L ++ +CG WH A+ G+ FTW
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGKNSH 166
Query: 506 XXXXXXXK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DP 563
+ ++ P V +L QV+ G + + AL+ +G V+ G GQLG
Sbjct: 167 GQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 564 KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 623
+ + + P V+ T+ V I+CG+ H AVLT V+T+G G+ G+LGH +D P
Sbjct: 227 EKDRESPCHVKLLRTQKVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 624 SLVEALKDKQVKSIVCGTSFTAA 646
V L +V I CG T A
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLA 308
Score = 291 (107.5 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 84/301 (27%), Positives = 139/301 (46%)
Query: 279 GIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG 338
G++ G G + + P+ + + + ++ACG H+ ++ +G++FSWG G+LG
Sbjct: 59 GLNTKGQL-GHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG 117
Query: 339 HGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM 397
D V+ P+LI L + V+CG H A+ G +TWG ++ G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNS--HGQLGLGKEF 175
Query: 398 -SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPR 456
S P+++ LEGI ++ V+ G H+ ++ +G +F +G G LG D +P
Sbjct: 176 PSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 457 EVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEAR 516
V L+ + V +CG HTA + + G +FT+
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDE 282
Query: 517 LVPTCVAALVEPNFCQVSCGHSLTVALT-TTGHVYTMGSPVYGQLGDPKA-NGKLPTRVE 574
+ P V L+ Q++CG T+A ++G +Y G GQLG N K P+ V+
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Query: 575 G 575
G
Sbjct: 343 G 343
Score = 233 (87.1 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14
Identities = 70/237 (29%), Positives = 106/237 (44%)
Query: 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 473
V V+CG H+ + G+++T G T G LGH +R + P ++ +L + ACG
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH-EREG-NKPEQIGALADQHIIHVACGE 93
Query: 474 WHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARL-VPTCVAALVEPNFCQ 532
H+ A+ + G+LF+W E + VP + L + Q
Sbjct: 94 SHSLALSD------------RGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA--NGKLPTRVEGKLTKNFVEEIACGDY 590
VSCG+ +AL G +T G +GQLG K + P RV L + ++A G
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGA 200
Query: 591 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
H L+ V+ WG G+LG D DR P V+ L+ ++V I CG TA +
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257
Score = 37 (18.1 bits), Expect = 9.6e-32, Sum P(2) = 9.6e-32
Identities = 7/39 (17%), Positives = 15/39 (38%)
Query: 626 VEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGC 664
V KD + + + ++ I +H+W + C
Sbjct: 879 VTVCKDNRQEFVDAYVNYVFQISVHEWYTAFSSGFLKVC 917
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 391 (142.7 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 110/364 (30%), Positives = 174/364 (47%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
P+ +E+ L + A G RH+ L+ V+S G+ G+LG P+ I AL
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 78
Query: 356 NINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 414
++++LV+CG+ H+ AV G ++TWG GS G+ G E+S ++P K+N L GI +
Sbjct: 79 TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI-GESKEIS-FMPTKINS-LAGIKI 135
Query: 415 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGV 473
VSCG +H+ ++ GQ+F++G G LG G+ + S ++P++V SL+G+ + A G
Sbjct: 136 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 195
Query: 474 WHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQV 533
H+ A+ +M G+L KE P + AL N +
Sbjct: 196 THSFAL-SLMGTSFGWGNNRSGQL--------ALSGNSAKEQIYKPHSIGALKTLNVVYI 246
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH- 591
SCG+ T LT G V+T G QL P++ P +EG V +I CG YH
Sbjct: 247 SCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG--IGGHVSQIECGSYHT 304
Query: 592 VAVLTSRTEVYTWGKGAN--GRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGTSFT-AA 646
+A + + +V + G+G + H + + L+ A L D +VK I G
Sbjct: 305 IAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAGAHANFVT 364
Query: 647 ICLH 650
C H
Sbjct: 365 TCRH 368
Score = 275 (101.9 bits), Expect = 6.5e-19, Sum P(2) = 6.5e-19
Identities = 69/219 (31%), Positives = 113/219 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG +G LG G S K SF+P + S + + ++CG H+ +++
Sbjct: 101 VFTWG-AGSEGQLGIG--ES------KEISFMPTKINSLAGIKIIQVSCGHYHSLALSED 151
Query: 324 GEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G+VFSWG G+LG G + + P+ + +L+ I + VA G H+ A++L G + WG
Sbjct: 152 GQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWG 211
Query: 383 GSNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
+ L G+ + ++ P + G L+ ++V +SCG HT+V+T GQ+FTFG +
Sbjct: 212 NNRSGQLALSGNSAKEQIYKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSS 270
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
L H R P+ ++ + G + CG +HT A V
Sbjct: 271 EQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYV 308
Score = 140 (54.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 36/116 (31%), Positives = 61/116 (52%)
Query: 277 GGGIHRSGSYA----GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEE 332
G G +RSG A K + P ++ + L+V I+CG H +++T+ G+VF++G
Sbjct: 209 GWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGS 268
Query: 333 LGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG-GSNC 386
+L H S P+LI+ + +V + CG +HT A V +G + + G G +C
Sbjct: 269 SSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYVYTTGQVVSLGRGPSC 323
Score = 43 (20.2 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 868 EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVA 904
EV R LT S L ++ T R++KEAL VA
Sbjct: 988 EVFSERDNPRSLTCHSIL-DLPKYSTMRRMKEALQVA 1023
Score = 38 (18.4 bits), Expect = 5.3e-31, Sum P(2) = 5.3e-31
Identities = 22/78 (28%), Positives = 34/78 (43%)
Query: 854 SPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAV----AGEET- 908
S KI+ + + T V K RA + + +EI L ++ A + AGE
Sbjct: 375 SMKILPEIIRITQPLVKKWRAAKKGKVHEDAKREISLIFSSPACLTASFLKKRDAGENNF 434
Query: 909 --AKCRAAKDVIKSLTAQ 924
+ A+DV K LTA+
Sbjct: 435 INVDLKLARDVFKMLTAE 452
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 381 (139.2 bits), Expect = 2.4e-31, P = 2.4e-31
Identities = 113/404 (27%), Positives = 189/404 (46%)
Query: 264 VFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
++ WG T G LG GGI + S +P ++AV Q +ACG RH +T
Sbjct: 7 LYCWGS-TSHGQLGLGGIEDEQ----ILTPSQIPWTPDTAV----QQVACGHRHTLFLTA 57
Query: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G+V++ G +LGH D P LI L++ + + CG H+ A++ G + +WG
Sbjct: 58 TGKVYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG 115
Query: 383 GSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
++C G LGH + + LPK + L V ++CG H+ +TS G+L+++G +
Sbjct: 116 DNDC--GQLGHATDKEIVQLPKVVR-QLVTKTVVQIACGNNHSLALTSCGELYSWGSNIY 172
Query: 442 GVLG---HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLF 498
G LG D + P + +L G+ ACG H+ + + G +F
Sbjct: 173 GQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK------------SGAVF 220
Query: 499 TWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 558
W + R PT + L V+CG +V LT G V+T G+ YG
Sbjct: 221 GWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYG 280
Query: 559 QLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDT 617
QLG ++ ++ R+ +L + + ++ACG+ H +A++ SR VY +G G++G+LG T
Sbjct: 281 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRST 340
Query: 618 DDRNFPSLVEA-LKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 660
P +V +++ ++ + + SG DQS+
Sbjct: 341 KSLMLPQVVIGPWVSPSGSALLQSNDSQVSLVIRQIFSGGDQSI 384
Score = 311 (114.5 bits), Expect = 8.8e-24, P = 8.8e-24
Identities = 93/332 (28%), Positives = 149/332 (44%)
Query: 325 EVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
E++ WG G+LG G D + P I + V+ VACG HT +T +G +Y G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 383 GSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 440
SN ++ LGH + L +P+ L+ + + CG H+ ++ GQ+ ++GD
Sbjct: 66 -SN-DYSQLGHDLPTKRPLLIPE-----LQDYVIIQICCGSRHSLALSDWGQVLSWGDND 118
Query: 441 FGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFT 499
G LGH D+ V P+ V L V+ ACG H+ A+ G+L++
Sbjct: 119 CGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSC------------GELYS 166
Query: 500 WXXXXXXXXXXXXKEARL---VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 556
W P + L+ ++CG + + ++ +G V+ G
Sbjct: 167 WGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 226
Query: 557 YGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 615
GQLG + + N PT+++ T V +ACGD LT+ V+T G GA G+LGHG
Sbjct: 227 CGQLGLNDETNRSYPTQLKTLRTLG-VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Query: 616 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
+ + P +V L + + CG T A+
Sbjct: 286 FSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 317 (116.6 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 99/334 (29%), Positives = 147/334 (44%)
Query: 319 LVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVE---LVACGEHHTCAVTL 374
L T +G + +WG +LG V + D S P + L N N+ ++ G +++ +T
Sbjct: 709 LDTSRG-LMTWGSASNCKLGFKVTAKDQSQPTP-ERLPNFNIPDICSISSGSYYSSVLTE 766
Query: 375 SGDMYTWGGSNCN---FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
+GD+Y WG +LG LP KL + V SVS G H A V + G
Sbjct: 767 NGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSD---VVSVSIGFCHGAAVRANG 823
Query: 432 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXX 491
+L T+G G G LGHGD + P+ + SL + CG HT + +
Sbjct: 824 ELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTK---------- 873
Query: 492 XXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 551
GK+++W P V+AL + N Q++ G + LTT+ V
Sbjct: 874 --NGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLV 931
Query: 552 MGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 611
G+ G + LPT V L ++ + CG Y A +T +VYTWG G
Sbjct: 932 FGN---GAAMGAASVVSLPTLVPS-LKYLHIDRLCCGHYSTAAITECGDVYTWGTGQE-- 985
Query: 612 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 645
LGHG P L+EAL+++ ++ I CG TA
Sbjct: 986 LGHGGNSTETSPKLIEALRNQSIRQISCGGRHTA 1019
Score = 274 (101.5 bits), Expect = 4.5e-31, Sum P(3) = 4.5e-31
Identities = 67/190 (35%), Positives = 102/190 (53%)
Query: 292 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 351
D +P +ES + DV +++ G H A V GE+ +WG G+LGHG ++ PK+I
Sbjct: 793 DQLLPFKLES--LSDVVSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKII 850
Query: 352 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 411
+L + + V CGE HT +T +G +Y+WG S +G LG G+ P +++ LE
Sbjct: 851 QSLTSFWITQVQCGEKHTICLTKNGKVYSWGASE--YGQLGLGDVTQHSSPMQVSA-LEK 907
Query: 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 471
+V ++ G H AV+T++ ++ FG+G G VS P V SLK L R C
Sbjct: 908 YNVLQIASGSTHCAVLTTSKEVLVFGNGA----AMGAASVVSLPTLVPSLKYLHIDRLCC 963
Query: 472 GVWHTAAVVE 481
G + TAA+ E
Sbjct: 964 GHYSTAAITE 973
Score = 251 (93.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 62/188 (32%), Positives = 97/188 (51%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
P V + +V IA G H A++T EV +G G +G S VS P L+ +LK
Sbjct: 899 PMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGN--GAAMGAA--SVVSLPTLVPSLK 954
Query: 356 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 415
++++ + CG + T A+T GD+YTWG LGHG + PK + L +
Sbjct: 955 YLHIDRLCCGHYSTAAITECGDVYTWGTGQ----ELGHGGNSTETSPKLIEA-LRNQSIR 1009
Query: 416 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH--GDRISVSTPREVDSLKGLRTVRAACGV 473
+SCG HTA +T +G++FT G +FG LG GD+ + P+ ++SL + +CG
Sbjct: 1010 QISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQ---NKPKRIESLTKTTFISVSCGE 1066
Query: 474 WHTAAVVE 481
+ A+ +
Sbjct: 1067 NYNVALFD 1074
Score = 243 (90.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 90/302 (29%), Positives = 131/302 (43%)
Query: 368 HTCAVTL--SGDMYTWGG-SNCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCGPWH 423
H A+ L S + TWG SNC G + S P++L P I + S+S G ++
Sbjct: 703 HRSAIHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPTPERL--PNFNIPDICSISSGSYY 760
Query: 424 TAVVTSAGQLFTFGDGTFG-----VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 478
++V+T G ++ +G G +LG P +++SL + V + G H AA
Sbjct: 761 SSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDV--VSVSIGFCHGAA 818
Query: 479 VVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHS 538
V G+L TW ++ P + +L QV CG
Sbjct: 819 V------------RANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEK 866
Query: 539 LTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
T+ LT G VY+ G+ YGQLG P +V L K V +IA G H AVLT+
Sbjct: 867 HTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSA-LEKYNVLQIASGSTHCAVLTT 925
Query: 598 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI--C--LHKWV 653
EV +G GA G + P+LV +LK + + CG TAAI C ++ W
Sbjct: 926 SKEVLVFGNGA----AMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWG 981
Query: 654 SG 655
+G
Sbjct: 982 TG 983
Score = 222 (83.2 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 69/266 (25%), Positives = 122/266 (45%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
P+ + + + D+ +I+ G +++++T+ G+V+ WG G + + P++ D L
Sbjct: 740 PERLPNFNIPDICSISSGSYYSSVLTENGDVYLWGR---GAVKTPAVPILGIPQIEDQLL 796
Query: 356 NINVEL------VACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGP 408
+E V+ G H AV +G++ TWG G N G LGHG+ + PK +
Sbjct: 797 PFKLESLSDVVSVSIGFCHGAAVRANGELLTWGVGEN---GQLGHGDTNNQIEPKIIQS- 852
Query: 409 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 468
L ++ V CG HT +T G+++++G +G LG GD S+P +V +L+ ++
Sbjct: 853 LTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQ 912
Query: 469 AACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEP 528
A G H A + ++ + +PT V +L
Sbjct: 913 IASGSTHCAVLT------------TSKEVLVFGNGAAMGAASVVS----LPTLVPSLKYL 956
Query: 529 NFCQVSCGHSLTVALTTTGHVYTMGS 554
+ ++ CGH T A+T G VYT G+
Sbjct: 957 HIDRLCCGHYSTAAITECGDVYTWGT 982
Score = 195 (73.7 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 48/140 (34%), Positives = 76/140 (54%)
Query: 283 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 342
+G+ G +P V S L + + CG A +T+ G+V++WG G LGHG +
Sbjct: 934 NGAAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGT--GQELGHGGN 991
Query: 343 SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGH--GNEMSLW 400
S + PKLI+AL+N ++ ++CG HT +T SG ++T G + FG LG G++
Sbjct: 992 STETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDS--FGQLGQMSGDQNK-- 1047
Query: 401 LPKKLNGPLEGIHVSSVSCG 420
PK++ + +S VSCG
Sbjct: 1048 -PKRIESLTKTTFIS-VSCG 1065
Score = 169 (64.5 bits), Expect = 4.5e-31, Sum P(3) = 4.5e-31
Identities = 42/131 (32%), Positives = 68/131 (51%)
Query: 518 VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ-LGDPKANGKLPTRVEGK 576
+PT V +L + ++ CGH T A+T G VYT G+ GQ LG + + ++
Sbjct: 946 LPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGT---GQELGHGGNSTETSPKLIEA 1002
Query: 577 LTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKS 636
L + +I+CG H A LT ++T GK + G+LG + D+N P +E+L S
Sbjct: 1003 LRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQM-SGDQNKPKRIESLTKTTFIS 1061
Query: 637 IVCGTSFTAAI 647
+ CG ++ A+
Sbjct: 1062 VSCGENYNVAL 1072
Score = 168 (64.2 bits), Expect = 5.7e-31, Sum P(3) = 5.7e-31
Identities = 50/157 (31%), Positives = 72/157 (45%)
Query: 452 VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXX 511
VS P V SLK L R CG + TAA+ E G ++TW
Sbjct: 944 VSLPTLVPSLKYLHIDRLCCGHYSTAAITEC------------GDVYTWGTGQELGHGGN 991
Query: 512 XKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT 571
E P + AL + Q+SCG T LT +G ++T G +GQLG + P
Sbjct: 992 STETS--PKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQNKPK 1049
Query: 572 RVEGKLTKNFVEEIACGD-YHVAVL-TSRT--EVYTW 604
R+E LTK ++CG+ Y+VA+ T+R+ + + W
Sbjct: 1050 RIES-LTKTTFISVSCGENYNVALFDTTRSFRDKFCW 1085
Score = 51 (23.0 bits), Expect = 4.5e-31, Sum P(3) = 4.5e-31
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 181 ESPPKNVLDKALSDAVLYAAPPKVLLPSESACGSVNSL-SSGGS 223
+ PP K+ S L P + P+ ++ G++NSL SSGG+
Sbjct: 150 QQPPSQQPPKSTSPPAL---PRREWPPNNTSSGNLNSLNSSGGN 190
Score = 41 (19.5 bits), Expect = 4.9e-30, Sum P(3) = 4.9e-30
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 197 LYAAPPKVLLPSESACGSVNSLSSGGSDGRTG 228
L+ PP + + ++ G++NSL S + +G
Sbjct: 333 LFNTPP-ISVSQSTSSGNLNSLYSSSAPTNSG 363
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 377 (137.8 bits), Expect = 6.3e-31, P = 6.3e-31
Identities = 101/356 (28%), Positives = 162/356 (45%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
++++ CG RH V G V++ G G+LGH + P+ + AL N+ V+CGE
Sbjct: 36 IRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGE 93
Query: 367 HHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 425
HT A+ G +Y WG ++ GL G E + +P+ + L I + V+CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLATDGQLGL--PGTEECIRVPRNIKS-LSEIQIVQVACGYYHSL 150
Query: 426 VVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
++ ++F++G +G LG G + ++P + SL G+ + A G H+ +
Sbjct: 151 ALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT---- 206
Query: 485 GXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 544
G +F W R VPT + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALT 258
Query: 545 TTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYT 603
G V+T G+ YGQLG + ++ R +L + V +I CG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYS 318
Query: 604 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQS 659
+G G NG+LG G T +R P V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGTTSNRKSPFTVKGNWLPYSTQCLIPADSEQYYCVKRIFSGGDQS 374
Score = 349 (127.9 bits), Expect = 6.8e-28, P = 6.8e-28
Identities = 100/324 (30%), Positives = 152/324 (46%)
Query: 329 WGEELGGRLG-HGVDSD-VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
WG G+LG G+D + V P+ D N + V CG HT V G +YT G C
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCG---C 60
Query: 387 N-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
N G LGH E + P+ + G L+ ++ +VSCG HT + GQ++ +G T G LG
Sbjct: 61 NDLGQLGH--EKARKRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLG 117
Query: 446 -HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXX 504
G + PR + SL ++ V+ ACG +H+ A+ + ++F+W
Sbjct: 118 LPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSK------------GSEVFSWGQNK 165
Query: 505 XXXXXXXXK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 563
+ + + P + +L+ F Q++ G + + LT +G ++ G +GQLG
Sbjct: 166 YGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN 225
Query: 564 KANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 622
N + +PT ++ T+ V I CG+ H A LT V+T+G G G+LGH T
Sbjct: 226 DDNDRYVPTLLKSLRTQKVVH-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN 284
Query: 623 PSLVEALKDKQVKSIVCGTSFTAA 646
P V L V I CG T A
Sbjct: 285 PRKVFELMGSLVTQITCGRQHTTA 308
Score = 295 (108.9 bits), Expect = 4.6e-22, P = 4.6e-22
Identities = 75/218 (34%), Positives = 110/218 (50%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG T DG LG G+ ++ VP+ ++S + + +ACG H+ ++K
Sbjct: 105 VYAWGLAT-DGQLG----LPGTEECIR----VPRNIKSLSEIQIVQVACGYYHSLALSKG 155
Query: 324 GEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
EVFSWG+ G+LG G + + P +I +L I +A G H+ +TLSG ++ WG
Sbjct: 156 SEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWG 215
Query: 383 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 442
+ FG LG ++ ++P L L V + CG HTA +T G +FTFG G +G
Sbjct: 216 RNK--FGQLGLNDDNDRYVPTLLKS-LRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYG 272
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
LGH PR+V L G + CG HT A V
Sbjct: 273 QLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFV 310
Score = 290 (107.1 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 87/290 (30%), Positives = 134/290 (46%)
Query: 297 KAVESAVVLDVQNI---ACGGRHAALVTKQGEVFSWGEELGGRLG-HGVDSDVSHPKLID 352
K E LD QNI +CG H + +G+V++WG G+LG G + + P+ I
Sbjct: 73 KRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIK 132
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP---- 408
+L I + VACG +H+ A++ ++++WG + +G LG G E KK N P
Sbjct: 133 SLSEIQIVQVACGYYHSLALSKGSEVFSWGQNK--YGQLGLGYEY-----KKQNSPHVIK 185
Query: 409 -LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 467
L GI + ++ G H+ V+T +G +F +G FG LG D P + SL+ + V
Sbjct: 186 SLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVV 245
Query: 468 RAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVE 527
CG HTAA+ + G +FT+ + P V L+
Sbjct: 246 HICCGEDHTAALTK------------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMG 293
Query: 528 PNFCQVSCGHSLTVALT-TTGHVYTMGSPVYGQLGD-PKANGKLPTRVEG 575
Q++CG T A ++G +Y+ G GQLG +N K P V+G
Sbjct: 294 SLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKG 343
Score = 270 (100.1 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 84/276 (30%), Positives = 127/276 (46%)
Query: 378 MYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
M WG N +FG LG G +E + P+K + L + V CG HT V G ++T
Sbjct: 1 MLCWG--NASFGQLGLGGIDEEIVLEPRKSDFFLNK-RIRDVGCGLRHTVFVLDDGTVYT 57
Query: 436 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXG 495
G G LGH + P V +L V +CG HT A+ + G
Sbjct: 58 CGCNDLGQLGHEK--ARKRPEHVGALDAQNIVAVSCGEAHTLALND------------KG 103
Query: 496 KLFTWXXXXXXXXXX-XXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
+++ W +E VP + +L E QV+CG+ ++AL+ V++ G
Sbjct: 104 QVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQ 163
Query: 555 PVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 611
YGQLG + K P ++ L F + IA G H VLT ++ WG+ G+
Sbjct: 164 NKYGQLGLGYEYKKQNS-PHVIKSLLGIPFAQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 612 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
LG D +DR P+L+++L+ ++V I CG TAA+
Sbjct: 222 LGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257
Score = 255 (94.8 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 67/193 (34%), Positives = 101/193 (52%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG+ G LG G Y K +S P ++S + + IA GG H+ ++T
Sbjct: 158 VFSWGQ-NKYGQLGLG------YEYKKQNS--PHVIKSLLGIPFAQIAAGGAHSFVLTLS 208
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G +F WG G+LG D+D P L+ +L+ V + CGE HT A+T G ++T+G
Sbjct: 209 GAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGA 268
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGTFG 442
+G LGH + P+K+ L G V+ ++CG HT A V S+G++++FG G G
Sbjct: 269 GG--YGQLGHNSTSHEINPRKVF-ELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNG 325
Query: 443 VLGHGDRISVSTP 455
LG G + +P
Sbjct: 326 QLGTGTTSNRKSP 338
Score = 166 (63.5 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 42/142 (29%), Positives = 67/142 (47%)
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHV 592
V CG TV + G VYT G GQLG KA K P V G L + ++CG+ H
Sbjct: 39 VGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKAR-KRPEHV-GALDAQNIVAVSCGEAHT 96
Query: 593 AVLTSRTEVYTWGKGANGRLGHGDTDDR-NFPSLVEALKDKQVKSIVCGTSFTAAICLHK 651
L + +VY WG +G+LG T++ P +++L + Q+ + CG + A+
Sbjct: 97 LALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGS 156
Query: 652 WVSGVDQSMCSGCRIPFNFKRK 673
V Q+ + + +K++
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQ 178
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 390 (142.3 bits), Expect = 6.4e-31, Sum P(2) = 6.4e-31
Identities = 110/342 (32%), Positives = 164/342 (47%)
Query: 311 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 370
A G H+ L+ G V S G+ G+LG P+ I AL+ +NV LV+CG+ H+
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSL 88
Query: 371 AVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 429
AV G ++ WG ++ G LG G + + ++PKK+ L GI + V+CG +H+ ++
Sbjct: 89 AVCHKGRVFAWGAAS--EGQLGIGEFKETTFIPKKIK-TLAGIKIIQVACGHYHSVALSE 145
Query: 430 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
GQ+F++G + G LG G S ++P+ V SL+G+ + A G H+ A+
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL--------- 196
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEA---RLVPTCVAALVEPNFCQVSCGHSLTVALTT 545
G F W A R P + AL +SCG+ T LT
Sbjct: 197 ---SLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253
Query: 546 TGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACG-DYHVAVLTSRTEVYT 603
G V+T G YGQLG DP A + P VE + V +I CG D+ +A + + +V +
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQVVS 311
Query: 604 WGKGAN--GRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGT 641
+G+G R H + + LV A L D QVK I GT
Sbjct: 312 FGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGT 353
Score = 323 (118.8 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 76/220 (34%), Positives = 124/220 (56%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG + +G LG G + K +F+PK +++ + + +ACG H+ +++
Sbjct: 96 VFAWGAAS-EGQLG-----IGEF---KETTFIPKKIKTLAGIKIIQVACGHYHSVALSED 146
Query: 324 GEVFSWGEELGGRLGHGVD--SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 381
G+VFSWG G+LG G + S S P+ + +L+ I + VA G HH+ A++LSG + W
Sbjct: 147 GQVFSWGTNSHGQLGLGKEFPSQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGW 205
Query: 382 GGSNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 440
G ++ L G+ + + P + G L+ + V S+SCG HTAV+T G++FTFGD +
Sbjct: 206 GSNSAGQLALSGNNAPVQRYKPVSI-GALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNS 264
Query: 441 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
+G LGH P+ V+ ++GL + + CG HT A +
Sbjct: 265 YGQLGHDPTAEKRGPQLVERIEGLVS-QIDCGSDHTLAYI 303
Score = 271 (100.5 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 92/313 (29%), Positives = 144/313 (46%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDAL 354
P+ + + L+V ++CG H+ V +G VF+WG G+LG G + + PK I L
Sbjct: 66 PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125
Query: 355 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIH 413
I + VACG +H+ A++ G +++WG +N + G LG G E S P+++ LEGI
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSWG-TNSH-GQLGLGKEFPSQASPQRVRS-LEGIP 182
Query: 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRISVST--PREVDSLKGLRTVRAA 470
++ V+ G H+ ++ +G F +G + G L G+ V P + +LK L V +
Sbjct: 183 LAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSIS 242
Query: 471 CGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNF 530
CG HTA + + GK+FT+ + P V +E
Sbjct: 243 CGYKHTAVLTQ------------DGKVFTFGDNSYGQLGHDPTAEKRGPQLVER-IEGLV 289
Query: 531 CQVSCGHSLTVA-LTTTGHVYTMG-SP-VYGQLGDPKANGK-LPTRVEGK-LTKNFVEEI 585
Q+ CG T+A + TTG V + G P + P A + V K L V+ I
Sbjct: 290 SQIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHI 349
Query: 586 ACGDYHVAVLTSR 598
G Y V TS+
Sbjct: 350 FAGTYANFVTTSQ 362
Score = 198 (74.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 65/234 (27%), Positives = 99/234 (42%)
Query: 420 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
G H+ ++ S G + + GD + G LG P + +L+ L +CG H+ AV
Sbjct: 31 GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAV 90
Query: 480 VEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXX-KEARLVPTCVAALVEPNFCQVSCGHS 538
G++F W KE +P + L QV+CGH
Sbjct: 91 CH------------KGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHY 138
Query: 539 LTVALTTTGHVYTMGSPVYGQLGDPKA--NGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 596
+VAL+ G V++ G+ +GQLG K + P RV L + ++A G +H L+
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGHHSFALS 197
Query: 597 SRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
+ WG + G+L G+ R P + ALK V SI CG TA +
Sbjct: 198 LSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251
Score = 154 (59.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 34/111 (30%), Positives = 66/111 (59%)
Query: 278 GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
G + SG+ A V+ + P ++ + L V +I+CG +H A++T+ G+VF++G+ G+L
Sbjct: 211 GQLALSGNNAPVQR--YKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQL 268
Query: 338 GHGVDSDVSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG-GSNC 386
GH ++ P+L++ ++ + V + CG HT A + +G + ++G G C
Sbjct: 269 GHDPTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIYTTGQVVSFGRGPGC 318
Score = 128 (50.1 bits), Expect = 0.00041, P = 0.00041
Identities = 32/118 (27%), Positives = 55/118 (46%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDY 590
Q + G ++ L + G V + G GQLG G+ P R+ T N V ++CG
Sbjct: 27 QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLN-VALVSCGKE 85
Query: 591 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF-PSLVEALKDKQVKSIVCGTSFTAAI 647
H + + V+ WG + G+LG G+ + F P ++ L ++ + CG + A+
Sbjct: 86 HSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVAL 143
Score = 38 (18.4 bits), Expect = 6.4e-31, Sum P(2) = 6.4e-31
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 619 DRNFPSLVEALKDKQVKSIVCGT 641
+ + SLV+ LK + +VC T
Sbjct: 526 ESSLSSLVQMLKTAIISQMVCWT 548
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 373 (136.4 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 110/351 (31%), Positives = 168/351 (47%)
Query: 305 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKLIDALKNINVELVA 363
++++ A G RH+ L+ G+V S G+ G+LG G + I AL+ ++V+LV+
Sbjct: 23 VELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRALETLHVDLVS 82
Query: 364 CGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 422
CG+ H+ AV G ++ WG GS G G E +L +P K+ L I + VSCG +
Sbjct: 83 CGKEHSLAVCHKGRVFAWGAGSEGQLGT-GEFKETNL-IPMKIK-TLNDIKIKQVSCGHY 139
Query: 423 HTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
H+ ++ GQ+F++G + G LG G + S ++P+ V SL G+ + A G H+ A+
Sbjct: 140 HSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFAL-- 197
Query: 482 VMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEAR---LVPTCVAALVEPNFCQVSCGHS 538
G F W P ++AL +SCG+
Sbjct: 198 ----------SLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYE 247
Query: 539 LTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLT 596
TV LT G V+T G YGQLG P A P VEG V +I CG YH +A +
Sbjct: 248 HTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEG--IDGLVSQIDCGSYHTLAYVY 305
Query: 597 SRTEVYTWGKGANGRLG--HGD--TDDRNFPSLVEA--LKDKQVKSIVCGT 641
+ +V ++G+ + H + T++ +F L+ A L D QVK I GT
Sbjct: 306 TTGKVVSFGREPTCKSSPTHPEALTENVDFTCLISADDLVDFQVKHIFAGT 356
Score = 298 (110.0 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 75/221 (33%), Positives = 120/221 (54%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG +G LG +G + K + +P +++ + ++ ++CG H+ +++
Sbjct: 97 VFAWG-AGSEGQLG-----TGEF---KETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEG 147
Query: 324 GEVFSWGEELGGRLGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 381
G+VFSWG G+LG G S S P+ + +L I + VA G H+ A++LSG + W
Sbjct: 148 GQVFSWGSNSDGQLGLGKKFPSQAS-PQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGW 206
Query: 382 GGSNCNFGLLGHGNEMS--LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDG 439
G +N L H N +S + P ++ L+ + V +SCG HT V+T G++FTFGD
Sbjct: 207 GRNNAG-QLALHKNNVSGQSYKPYSISA-LKNLGVIYISCGYEHTVVLTQNGKVFTFGDN 264
Query: 440 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
T+G LGH S P+ V+ + GL + + CG +HT A V
Sbjct: 265 TYGQLGHSPTAEKSGPQLVEGIDGLVS-QIDCGSYHTLAYV 304
Score = 276 (102.2 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 91/315 (28%), Positives = 146/315 (46%)
Query: 338 GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGH-GNE 396
G G VS ++ L + + A GE H+ + +G +++ G + G LG G
Sbjct: 6 GPGPRGPVSRRRV--GLGGVELRQAASGERHSLLLLSNGQVHSCGDNGR--GQLGQRGAP 61
Query: 397 MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST-P 455
S L +++ LE +HV VSCG H+ V G++F +G G+ G LG G+ + P
Sbjct: 62 CSAQLKERIRA-LETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIP 120
Query: 456 REVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXK-E 514
++ +L ++ + +CG +H+ A+ E G++F+W K
Sbjct: 121 MKIKTLNDIKIKQVSCGHYHSLALSE------------GGQVFSWGSNSDGQLGLGKKFP 168
Query: 515 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN--GKLPTR 572
++ P V +L QV+ G + + AL+ +G + G GQL K N G+
Sbjct: 169 SQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKP 228
Query: 573 VEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKD 631
KN V I+CG H VLT +V+T+G G+LGH T +++ P LVE + D
Sbjct: 229 YSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGI-D 287
Query: 632 KQVKSIVCGTSFTAA 646
V I CG+ T A
Sbjct: 288 GLVSQIDCGSYHTLA 302
Score = 249 (92.7 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 73/272 (26%), Positives = 128/272 (47%)
Query: 288 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 347
G + + + + + L V ++CG H+ V +G VF+WG G+LG G + +
Sbjct: 59 GAPCSAQLKERIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNL 118
Query: 348 -PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKL 405
P I L +I ++ V+CG +H+ A++ G +++WG SN + G LG G + S P+++
Sbjct: 119 IPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWG-SNSD-GQLGLGKKFPSQASPQRV 176
Query: 406 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRISVST--PREVDSLK 462
L+GI ++ V+ G H+ ++ +G F +G G L H + +S + P + +LK
Sbjct: 177 RS-LDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALK 235
Query: 463 GLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCV 522
L + +CG HT + + GK+FT+ + P V
Sbjct: 236 NLGVIYISCGYEHTVVLTQ------------NGKVFTFGDNTYGQLGHSPTAEKSGPQLV 283
Query: 523 AALVEPNFCQVSCGHSLTVALT-TTGHVYTMG 553
++ Q+ CG T+A TTG V + G
Sbjct: 284 EG-IDGLVSQIDCGSYHTLAYVYTTGKVVSFG 314
Score = 197 (74.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 66/248 (26%), Positives = 108/248 (43%)
Query: 409 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH-GDRISVSTPREVDSLKGLRTV 467
L G+ + + G H+ ++ S GQ+ + GD G LG G S + +L+ L
Sbjct: 20 LGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRALETLHVD 79
Query: 468 RAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXX-KEARLVPTCVAALV 526
+CG H+ AV G++F W KE L+P + L
Sbjct: 80 LVSCGKEHSLAVCH------------KGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLN 127
Query: 527 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----V 582
+ QVSCGH ++AL+ G V++ GS GQLG K K P++ + ++ +
Sbjct: 128 DIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGK---KFPSQASPQRVRSLDGIPL 184
Query: 583 EEIACGDYHVAVLTSRTEVYTWGKGANGRLG-H-GDTDDRNF-PSLVEALKDKQVKSIVC 639
++A G H L+ + WG+ G+L H + +++ P + ALK+ V I C
Sbjct: 185 AQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISC 244
Query: 640 GTSFTAAI 647
G T +
Sbjct: 245 GYEHTVVL 252
Score = 154 (59.3 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 39/143 (27%), Positives = 69/143 (48%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA--NGKLPTRVEGKLTKNFVEEIACGD 589
Q + G ++ L + G V++ G GQLG A + +L R+ T + V+ ++CG
Sbjct: 27 QAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRALETLH-VDLVSCGK 85
Query: 590 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF-PSLVEALKDKQVKSIVCGTSFTAAIC 648
H + + V+ WG G+ G+LG G+ + N P ++ L D ++K + CG + A+
Sbjct: 86 EHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALS 145
Query: 649 ----LHKWVSGVDQSMCSGCRIP 667
+ W S D + G + P
Sbjct: 146 EGGQVFSWGSNSDGQLGLGKKFP 168
Score = 149 (57.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 34/111 (30%), Positives = 62/111 (55%)
Query: 277 GGGIHRSGSYA----GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEE 332
G G + +G A V S+ P ++ + L V I+CG H ++T+ G+VF++G+
Sbjct: 205 GWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDN 264
Query: 333 LGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG 382
G+LGH ++ S P+L++ + + V + CG +HT A V +G + ++G
Sbjct: 265 TYGQLGHSPTAEKSGPQLVEGIDGL-VSQIDCGSYHTLAYVYTTGKVVSFG 314
Score = 53 (23.7 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 17/81 (20%), Positives = 37/81 (45%)
Query: 866 SEEVIKLRAQVEELTRK--SQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTA 923
+E V K+R Q ++ ++ + LQE L + LK A+ + + +K+L
Sbjct: 507 AEAVCKMRDQSSKILKQCWASLQESSLNTLVQMLKTAIISQFYHRTQTNQSHCNLKALLG 566
Query: 924 QLKDMAEMLPVGAVRNSNSFH 944
+K++ ++ N+F+
Sbjct: 567 MMKEVHKVNTANCQLPENTFN 587
Score = 37 (18.1 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 1042 DLKRVRFSRKKFSEKQ 1057
DLK+ R + KK +E Q
Sbjct: 438 DLKKARDTFKKLTETQ 453
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 377 (137.8 bits), Expect = 5.4e-30, Sum P(2) = 5.4e-30
Identities = 109/365 (29%), Positives = 173/365 (47%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL-IDAL 354
P+ +E+ L + A G RH+ L+ V+S G+ G+LG P+ I AL
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQAL 78
Query: 355 KNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 413
++++LV+CG+ H+ AV G ++TWG GS G+ G E+S ++P K+N L GI
Sbjct: 79 STVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI-GESKEIS-FMPTKINS-LAGIK 135
Query: 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACG 472
+ VSCG +H+ ++ GQ+F++G G LG G+ + S ++P++V SL+G+ + A G
Sbjct: 136 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAG 195
Query: 473 VWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQ 532
H+ A+ +M G+L E P + AL N
Sbjct: 196 GTHSFAL-SLMGTSFGWGNNRSGQL-------ALSGNSAKAEQIYKPHSIGALKTLNVVY 247
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH 591
+SCG+ T LT G V+T G QL P++ P +EG V +I CG YH
Sbjct: 248 ISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG--IGGHVSQIECGSYH 305
Query: 592 -VAVLTSRTEVYTWGKGAN--GRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGTSFT-A 645
+A + + +V + G+G + H + + L+ A L D +VK I G
Sbjct: 306 TIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAGAHANFV 365
Query: 646 AICLH 650
C H
Sbjct: 366 TTCRH 370
Score = 267 (99.0 bits), Expect = 9.1e-18, Sum P(3) = 9.1e-18
Identities = 69/220 (31%), Positives = 113/220 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG +G LG G S K SF+P + S + + ++CG H+ +++
Sbjct: 102 VFTWG-AGSEGQLGIG--ES------KEISFMPTKINSLAGIKIIQVSCGHYHSLALSED 152
Query: 324 GEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G+VFSWG G+LG G + + P+ + +L+ I + VA G H+ A++L G + WG
Sbjct: 153 GQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWG 212
Query: 383 GSNCN-FGLLGHGNEMS-LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 440
+ L G+ + ++ P + G L+ ++V +SCG HT+V+T GQ+FTFG +
Sbjct: 213 NNRSGQLALSGNSAKAEQIYKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSS 271
Query: 441 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
L H R P+ ++ + G + CG +HT A V
Sbjct: 272 SEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYV 310
Score = 136 (52.9 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 36/117 (30%), Positives = 62/117 (52%)
Query: 277 GGGIHRSGSYA----GVKMDS-FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 331
G G +RSG A K + + P ++ + L+V I+CG H +++T+ G+VF++G
Sbjct: 210 GWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGG 269
Query: 332 ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG-GSNC 386
+L H S P+LI+ + +V + CG +HT A V +G + + G G +C
Sbjct: 270 SSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYVYTTGQVVSLGRGPSC 325
Score = 44 (20.5 bits), Expect = 9.1e-18, Sum P(3) = 9.1e-18
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 73 GQRTPIFQRYPRPEKEYQSFSLIYND 98
GQ++P Q RPE+ Q+ S ++ D
Sbjct: 61 GQKSP--QSTKRPEEPIQALSTVHID 84
Score = 43 (20.2 bits), Expect = 5.4e-30, Sum P(2) = 5.4e-30
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 868 EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVA 904
EV R LT S L ++ T R++KEAL VA
Sbjct: 990 EVFSERDNPRSLTCHSIL-DLPKYSTMRRMKEALQVA 1025
Score = 38 (18.4 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 22/78 (28%), Positives = 34/78 (43%)
Query: 854 SPKIVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAV----AGEET- 908
S KI+ + + T V K RA + + +EI L ++ A + AGE
Sbjct: 377 SMKILPEIIRITQPLVKKWRAAKKGKVHEDAKREISLIFSSPACLTASFLKKRDAGENNF 436
Query: 909 --AKCRAAKDVIKSLTAQ 924
+ A+DV K LTA+
Sbjct: 437 INVDLKLARDVFKMLTAE 454
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 357 (130.7 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 106/347 (30%), Positives = 160/347 (46%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACG 365
D Q I G +++ G V + G+ GRLG G ++ S K + + +++ V+
Sbjct: 404 DAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSS 463
Query: 366 ---EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 422
+ HT A T G++++WG + +G LGHGN + PK + GPL+G V VS G
Sbjct: 464 KGSDGHTLAFTTEGEVFSWGDGD--YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYR 521
Query: 423 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 482
H+A VT G+L+T+G+G FG LGHGD S + P V + + V +CG HT A+ +
Sbjct: 522 HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK- 578
Query: 483 MVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLV--PTCVAALVEPNFCQVSCGHSLT 540
G+ W + V P + AL +V G +
Sbjct: 579 -----------DGRT-VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS 626
Query: 541 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 600
+ALT+TG VY G G +A P +E +L + +I+ GD H L+ E
Sbjct: 627 LALTSTGQVYAWGCGACLGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNE 685
Query: 601 VYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
VY WG + G+ G G+ T P V L ++ I GTS + A
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 313 (115.2 bits), Expect = 6.6e-24, P = 6.6e-24
Identities = 97/331 (29%), Positives = 150/331 (45%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 376
A +V++ EV+ WG +L G + PKL + + + + G++ T ++ G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSD--AQTIEAGQYCTFVISTDG 422
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIH-VSSVSCGPWHTAVVTSAGQLF 434
+ G + +G LG G+ + KKL P I VSS HT T+ G++F
Sbjct: 423 SVRACGKGS--YGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 435 TFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXX 493
++GDG +G LGHG+ + P+ + L+G V + G H+AAV E
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------------ 528
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH-VYTM 552
G+L+TW +R +PT V + N +VSCG S T+AL+ G V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSF 586
Query: 553 GSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 612
G G+LG N +V L F+ ++ G LTS +VY WG GA L
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--L 644
Query: 613 GHGDTDDRNF-PSLVEALKDKQVKSIVCGTS 642
G G ++ P L+E L ++ I G S
Sbjct: 645 GCGSSEATALRPKLIEELAATRIVDISIGDS 675
Score = 238 (88.8 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 80/296 (27%), Positives = 138/296 (46%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
++Y WG SN + L+ G + + PK P ++ G + T V+++ G +
Sbjct: 373 EVYVWG-SNSSHQLV-EGTQEKILQPKL--APSFS-DAQTIEAGQYCTFVISTDGSVRAC 427
Query: 437 GDGTFGVLGHGDRISVSTPREV--DSLKGLRTVRAACGV-WHTAAVVEVMVGXXXXXXXX 493
G G++G LG GD + ST +++ + + ++ V ++ G HT A
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT------------T 475
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNF--CQVSCGHSLTVALTTTGHVYT 551
G++F+W + P + ++ C VS G+ + A+T G +YT
Sbjct: 476 EGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGELYT 534
Query: 552 MGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTS--RTEVYTWGKGA 608
G +G+LG +N + +PT V K N V E++CG H L+ RT V+++G G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLV--KDISN-VGEVSCGSSHTIALSKDGRT-VWSFGGGD 590
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGC 664
NG+LGHGDT+ P ++EAL+ ++ + G+ + A+ V C GC
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGC 646
Score = 230 (86.0 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 62/218 (28%), Positives = 107/218 (49%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
++ WGE GD G LG G S + +P V+ + +V ++CG H ++K
Sbjct: 532 LYTWGE--GDFGRLGHGDSNSRN---------IPTLVKD--ISNVGEVSCGSSHTIALSK 578
Query: 323 QGE-VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 381
G V+S+G G+LGHG + V PK+I+AL+ + + V G + A+T +G +Y W
Sbjct: 579 DGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAW 638
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G C LG G+ + L KL L + +S G H ++ +++ +G+ +
Sbjct: 639 GCGAC----LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694
Query: 442 GVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAA 478
G G G+ ++ P++V L G+ + + G H+ A
Sbjct: 695 GQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 174 (66.3 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 39/138 (28%), Positives = 73/138 (52%)
Query: 294 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV-DSDVSHPKLID 352
+ PK +E+ + ++ + G + + +T G+V++WG G LG G ++ PKLI+
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIE 660
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEG 411
L + ++ G+ H +++ ++Y WG N + G G GN + PKK++G L+G
Sbjct: 661 ELAATRIVDISIGDSHCLSLSHDNEVYAWG--NNSMGQCGQGNSTGPITKPKKVSG-LDG 717
Query: 412 IHVSSVSCGPWHTAVVTS 429
I + +S G H+ T+
Sbjct: 718 IAIQQISAGTSHSLAWTA 735
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 350 (128.3 bits), Expect = 5.3e-28, P = 5.3e-28
Identities = 97/313 (30%), Positives = 149/313 (47%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
++ +ACG +H+ + G V++ G G+LGH D S P+L+ AL + V+CG+
Sbjct: 36 LKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGH--DKGGSRPELVGALDAQKISGVSCGQ 93
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 425
H+ AV G ++ WG + G LG G E ++ +P+ + E +S V CG H
Sbjct: 94 AHSLAVNEQGQVFAWGAGDG--GQLGLGTAEEAVRVPRLIKKLCEH-RISQVMCGNHHCI 150
Query: 426 VVTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
++ GQLF +G+ + G LG G S +P+ + SL G+ + + G H+ A+
Sbjct: 151 ALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFAL----- 205
Query: 485 GXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 544
G +F W ++ R VP + L +SCG T ALT
Sbjct: 206 -------SFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALT 258
Query: 545 TTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVY 602
G ++T G+ GQLG D N LP RV +L V +IACG H +A + S +Y
Sbjct: 259 KEGGLFTFGNGSKGQLGHDSTRNEPLPRRVM-ELMGTEVSQIACGRNHTLAFVPSTGLIY 317
Query: 603 TWGKGANGRLGHG 615
+G G+LG G
Sbjct: 318 AFGCNTQGQLGTG 330
Score = 332 (121.9 bits), Expect = 4.6e-26, P = 4.6e-26
Identities = 99/322 (30%), Positives = 146/322 (45%)
Query: 329 WGEELGGRLGHGV-DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN 387
WG G+LG G ++ V P+ ++ VACG H+ + G +YT G ++C
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSC- 63
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G LGH S P+ L G L+ +S VSCG H+ V GQ+F +G G G LG G
Sbjct: 64 -GQLGHDKGGSR--PE-LVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLG 119
Query: 448 D-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXX 506
+V PR + L R + CG H A+ + G+LF W
Sbjct: 120 TAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSK------------DGQLFVWGENSSG 167
Query: 507 XXXXXXKE-ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPK 564
E + L P + +L Q+S G + AL+ +G V+ G GQLG + +
Sbjct: 168 QLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDE 227
Query: 565 ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 624
+ +P ++ L V I+CG+ H A LT ++T+G G+ G+LGH T + P
Sbjct: 228 QDRAVPCHIKF-LRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPR 286
Query: 625 LVEALKDKQVKSIVCGTSFTAA 646
V L +V I CG + T A
Sbjct: 287 RVMELMGTEVSQIACGRNHTLA 308
Score = 281 (104.0 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 82/271 (30%), Positives = 120/271 (44%)
Query: 213 GSVNSLSSGGSDGRTGHLKGLSGDTF--RVXXXXXXXXXXXXXXXXXXXXXXXVFIWGEC 270
GSV + S S G+ GH KG S + VF WG
Sbjct: 53 GSVYTCGSN-SCGQLGHDKGGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWG-- 109
Query: 271 TGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG 330
GDG G + + V++ + K E + + CG H ++K G++F WG
Sbjct: 110 AGDG---GQLGLGTAEEAVRVPRLIKKLCEHRI----SQVMCGNHHCIALSKDGQLFVWG 162
Query: 331 EELGGRLGHGV-DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFG 389
E G+LG G + P+ + +L I + ++ G H+ A++ SG ++ WG ++ G
Sbjct: 163 ENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSA--G 220
Query: 390 LLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 449
LG +E +P + L V +SCG HTA +T G LFTFG+G+ G LGH
Sbjct: 221 QLGLNDEQDRAVPCHIKF-LRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDST 279
Query: 450 ISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
+ PR V L G + ACG HT A V
Sbjct: 280 RNEPLPRRVMELMGTEVSQIACGRNHTLAFV 310
Score = 264 (98.0 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 69/202 (34%), Positives = 108/202 (53%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
+F+WGE G LG G G + + P+ ++S + + I+ GG H+ ++
Sbjct: 158 LFVWGE-NSSGQLGLG---KG-----EPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFS 208
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G VF WG+ G+LG + D + P I L++ V ++CGE HT A+T G ++T+G
Sbjct: 209 GAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFG- 267
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGTFG 442
N + G LGH + + LP+++ L G VS ++CG HT A V S G ++ FG T G
Sbjct: 268 -NGSKGQLGHDSTRNEPLPRRVM-ELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQG 325
Query: 443 VLGHGDRISVSTPREVDSLKGL 464
LG G R S +P V +++ L
Sbjct: 326 QLGTGIRGSAKSPVPVSNIQPL 347
Score = 254 (94.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 81/276 (29%), Positives = 124/276 (44%)
Query: 378 MYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
M WG S G LG G +E S++ P+ +G + V+CG H+ + G ++T
Sbjct: 2 MLCWGSSGA--GQLGIGASEASVFEPRSCC-VFDGRGLKEVACGNQHSLFLLHDGSVYTC 58
Query: 437 GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGK 496
G + G LGH D+ S P V +L + +CG H+ AV E G+
Sbjct: 59 GSNSCGQLGH-DK-GGSRPELVGALDAQKISGVSCGQAHSLAVNE------------QGQ 104
Query: 497 LFTWXXXXXXXXXX-XXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
+F W +EA VP + L E QV CG+ +AL+ G ++ G
Sbjct: 105 VFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGEN 164
Query: 556 VYGQLGDPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAVLTSRTEVYTWGKGANGR 611
GQLG K P+ + + K+ + +I+ G H L+ V+ WGK + G+
Sbjct: 165 SSGQLGLGKGE---PSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQ 221
Query: 612 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
LG D DR P ++ L+ ++V I CG TAA+
Sbjct: 222 LGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAAL 257
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 353 (129.3 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 104/340 (30%), Positives = 166/340 (48%)
Query: 309 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 368
+I+CG H A+VT G+++ +G G+LG G + V P + ALK +L CG +H
Sbjct: 41 HISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNH 100
Query: 369 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 428
T T G++Y GG++ G LG G+ ++ + ++ G + +A VT
Sbjct: 101 TLVYTEKGNVYAAGGNS--EGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVT 158
Query: 429 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
GQLF +GD + G +G D+ VS P +VD K + ++ +CG +H+A +
Sbjct: 159 EDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSI--SCGYYHSAFIT-------- 208
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEAR--LVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
G+L+T+ ++ + VP V ++E +V+CG TV LT T
Sbjct: 209 ----GDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME-KVNKVACGGEHTVVLTET 263
Query: 547 GHVYTMGSPVYGQLGDPKANGK--LPTRVEGKLTKNFVEEIACGDYHVAVL--TSRTEVY 602
G VYT G YGQLG K +P V+ L + + + CG+ H AV+ T ++
Sbjct: 264 G-VYTFGLGQYGQLGHGTLLFKTSVPKSVK-HLRSHKIHNVTCGESHTAVIADTENGLMF 321
Query: 603 TWGKGANGRLGHGDTDDRN-F-PSLVEALKDKQVKSIVCG 640
T+G G +G+LG G+ + N F P+L V + CG
Sbjct: 322 TFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACG 361
Score = 310 (114.2 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 93/298 (31%), Positives = 141/298 (47%)
Query: 355 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 414
KN ++CG+ HT VT +G +Y +G SN ++G LG G++ ++ P + L+
Sbjct: 35 KNDKPVHISCGDEHTAVVTGNGKLYMFG-SN-DWGQLGLGSKNTVRKPTCVKA-LKPEKT 91
Query: 415 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACGV 473
CG HT V T G ++ G + G LG GD +T + ++ A G
Sbjct: 92 KLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGS 151
Query: 474 WHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQV 533
+ +AAV E G+LF W K VP C + +P +
Sbjct: 152 YTSAAVTE------------DGQLFVWGDNSEGQIGLADKTCVSVP-CQVDVGKP-VSSI 197
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGDY 590
SCG+ + +T G +YT G P G+LG + N ++P V G + K V ++ACG
Sbjct: 198 SCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEK--VNKVACGGE 255
Query: 591 HVAVLTSRTEVYTWGKGANGRLGHGDTDDR-NFPSLVEALKDKQVKSIVCGTSFTAAI 647
H VLT T VYT+G G G+LGHG + + P V+ L+ ++ ++ CG S TA I
Sbjct: 256 HTVVLTE-TGVYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVI 312
Score = 252 (93.8 bits), Expect = 7.5e-17, Sum P(2) = 7.5e-17
Identities = 60/181 (33%), Positives = 99/181 (54%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
++ +A G +A VT+ G++F WG+ G++G + VS P +D K ++ ++CG
Sbjct: 144 IKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSS--ISCGY 201
Query: 367 HHTCAVTLSGDMYTWGG-SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 425
+H+ +T G++YT+G N GLL + S +P+ + G +E V+ V+CG HT
Sbjct: 202 YHSAFITGDGELYTFGEPENGKLGLLPEQLKNSR-VPQPVLGIME--KVNKVACGGEHTV 258
Query: 426 VVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
V+T G ++TFG G +G LGHG + S P+ V L+ + CG HTA + +
Sbjct: 259 VLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIADTEN 317
Query: 485 G 485
G
Sbjct: 318 G 318
Score = 222 (83.2 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 71/221 (32%), Positives = 109/221 (49%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
+F+WG+ +G +G K VP V+ V V +I+CG H+A +T
Sbjct: 163 LFVWGD-NSEGQIG---------LADKTCVSVPCQVD--VGKPVSSISCGYYHSAFITGD 210
Query: 324 GEVFSWGEELGGRLG----HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 379
GE++++GE G+LG +S V P ++ ++ +N VACG HT +T +G +Y
Sbjct: 211 GELYTFGEPENGKLGLLPEQLKNSRVPQP-VLGIMEKVNK--VACGGEHTVVLTETG-VY 266
Query: 380 TWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGIHVSSVSCGPWHTAVV--TSAGQLFTF 436
T+G +G LGHG + +PK + L + +V+CG HTAV+ T G +FTF
Sbjct: 267 TFGLGQ--YGQLGHGTLLFKTSVPKSVKH-LRSHKIHNVTCGESHTAVIADTENGLMFTF 323
Query: 437 GDGTFGVLGHGDRISVST--PREVDSLKGLRTVRAACGVWH 475
GDG G LG G+ + P + + ACG H
Sbjct: 324 GDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCH 364
Score = 136 (52.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 41/116 (35%), Positives = 54/116 (46%)
Query: 366 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 425
E V SG ++T+G SN W K + P +H+S CG HTA
Sbjct: 4 EEEELPVPESGAVFTFGKSN-----FAENIPSKFWF--KNDKP---VHIS---CGDEHTA 50
Query: 426 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
VVT G+L+ FG +G LG G + +V P V +LK +T A CG HT E
Sbjct: 51 VVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHTLVYTE 106
Score = 42 (19.8 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 990 RSPSQTEASHCEATTKNKNRTMKAEPAQG 1018
R P +TE S +TK K ++ K A G
Sbjct: 692 REPGRTENSAVSKSTKQKMKS-KQHAANG 719
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 348 (127.6 bits), Expect = 8.0e-28, P = 8.0e-28
Identities = 102/349 (29%), Positives = 164/349 (46%)
Query: 305 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 364
+++ A G H+ L+ V+S G+ G+LG D P+ I AL +++V+LV+C
Sbjct: 22 IELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSC 81
Query: 365 GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 423
G+ H+ AV G ++ WG GS G+ G E+S ++P K+ L GI + VSCG +H
Sbjct: 82 GKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEIS-FMPTKIKA-LAGIKIIQVSCGHYH 138
Query: 424 TAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 482
+ ++ G +F++G + G LG G S + P++V SL+G+ + A G H+ A+
Sbjct: 139 SLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL--- 195
Query: 483 MVGXXXXXXXXXGKLFTWXXXXXXXXXXXX---KEARLVPTCVAALVEPNFCQVSCGHSL 539
G F W KE P + AL + +SCG+
Sbjct: 196 ---------SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEH 246
Query: 540 TVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTS 597
T LT G V+T G GQL P++ + P +EG V +I C YH +A + +
Sbjct: 247 TAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG--IGGRVSQIECASYHTIAYVYT 304
Query: 598 RTEVYTWGKG----ANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCG 640
+V + G+G +N ++ + L+ A L D +VK I G
Sbjct: 305 TGQVVSLGRGPSHTSNPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAG 353
Score = 277 (102.6 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 71/220 (32%), Positives = 117/220 (53%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG +G LG G + + SF+P +++ + + ++CG H+ +++
Sbjct: 95 VFAWG-AGSEGQLG-----IGEFKEI---SFMPTKIKALAGIKIIQVSCGHYHSLALSED 145
Query: 324 GEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G VFSWG G+LG G +S + P+ + +L+ I + VA G H+ A++L+G + WG
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWG 205
Query: 383 GSNCNFGLLGHGNEMS--LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 440
SN + L GN++ ++ P + G L+ + V +SCG HTAV+T GQ+FTFG +
Sbjct: 206 -SNRSGQLALSGNKVKEQIYKPHSI-GALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNS 263
Query: 441 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
G L R P+ ++ + G R + C +HT A V
Sbjct: 264 SGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYV 302
Score = 273 (101.2 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 86/331 (25%), Positives = 154/331 (46%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDAL 354
P+ +++ L V ++CG H+ V +G+VF+WG G+LG G ++S P I AL
Sbjct: 65 PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL 124
Query: 355 KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG-NEMSLWLPKKLNGPLEGIH 413
I + V+CG +H+ A++ G +++WG ++ G LG G N S +P+K+ LEGI
Sbjct: 125 AGIKIIQVSCGHYHSLALSEDGHVFSWGRNS--EGQLGLGKNSRSQAIPQKVKS-LEGIP 181
Query: 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRIS--VSTPREVDSLKGLRTVRAA 470
++ V+ G H+ ++ G F +G G L G+++ + P + +LK L + +
Sbjct: 182 LAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYIS 241
Query: 471 CGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNF 530
CG HTA + E G++FT+ + + P + +
Sbjct: 242 CGYEHTAVLTE------------EGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG-IGGRV 288
Query: 531 CQVSCGHSLTVALT-TTGHVYTMG-------SPVYGQLGDPKANGKLPTRVEGK-LTKNF 581
Q+ C T+A TTG V ++G +P + + P N + + + L
Sbjct: 289 SQIECASYHTIAYVYTTGQVVSLGRGPSHTSNPTHQEA--PAENSDITCLLAAEDLVDIE 346
Query: 582 VEEIACGDYHVAVLTSRTEVYTWGKGANGRL 612
V++I G H +T+R +T G + ++
Sbjct: 347 VKDIFAGA-HANFVTTRRVSHTRSTGVSMKI 376
Score = 228 (85.3 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 70/252 (27%), Positives = 111/252 (44%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 461
P++L GI + + G H+ ++ S ++++ GD ++G LG S P + +L
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 462 KGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXX-KEARLVPT 520
L +CG H+ AV GK+F W KE +PT
Sbjct: 72 NDLHVDLVSCGKEHSVAVCH------------KGKVFAWGAGSEGQLGIGEFKEISFMPT 119
Query: 521 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK--LPTRVEGKLT 578
+ AL QVSCGH ++AL+ GHV++ G GQLG K + +P +V+ L
Sbjct: 120 KIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS-LE 178
Query: 579 KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVK 635
+ ++A G H L+ + WG +G+L G+ + P + ALK+ V
Sbjct: 179 GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVI 238
Query: 636 SIVCGTSFTAAI 647
I CG TA +
Sbjct: 239 YISCGYEHTAVL 250
Score = 130 (50.8 bits), Expect = 0.00025, P = 0.00025
Identities = 38/117 (32%), Positives = 60/117 (51%)
Query: 271 TGDGILGGGIHRSGSYA--G--VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 326
TG G G +RSG A G VK + P ++ + L V I+CG H A++T++G+V
Sbjct: 198 TGTSF-GWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQV 256
Query: 327 FSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG 382
F++G G+L S P+LI+ + V + C +HT A V +G + + G
Sbjct: 257 FTFGGNSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLG 312
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 326 (119.8 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 107/344 (31%), Positives = 153/344 (44%)
Query: 325 EVFSWGEELGGRLGHGVD---------------SDVSH-----PKLIDALKNINVELVAC 364
++FSWG G+LG G++ SD S P IDA + ++C
Sbjct: 49 QLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISC 108
Query: 365 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 424
G H+ +T+ GD++ WG + G LG G E S+++P LN E + ++ G H+
Sbjct: 109 GLFHS-GLTIDGDLWIWGKGDG--GRLGFGQENSVFVPN-LNPLFEEHSIRCIALGGLHS 164
Query: 425 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
+T G +FT+G G FG LGH PR VD + A HTAA+ E
Sbjct: 165 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGE 224
Query: 485 GXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALT 544
G+L VP+ V AL P VSCG T+ALT
Sbjct: 225 LYMWGREEGDGRLGLGPGRGPNEGGGLS-----VPSKVKALTVP-VASVSCGGFFTMALT 278
Query: 545 TTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 603
G ++ G+ +LG G P V L + +IACG YH LT +V +
Sbjct: 279 KEGQLWNWGANSNYELGRGDNLGGWEPMPVPS-LEGVRITQIACGGYHSLALTEEGKVLS 337
Query: 604 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
WG G +G+LG ++ P+ +EAL DK++ I G S +AAI
Sbjct: 338 WGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAI 381
Score = 320 (117.7 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 106/335 (31%), Positives = 157/335 (46%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
++IWG+ GDG G R G G + FVP ++ IA GG H+ +T Q
Sbjct: 121 LWIWGK--GDG---G---RLGF--GQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQ 170
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G+VF+WG G LGH V + P+ +D + + +A HT A+T SG++Y WG
Sbjct: 171 GDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGR 230
Query: 384 SNCNFGL-LGHG---NEMS-LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 438
+ L LG G NE L +P K+ + V+SVSCG + T +T GQL+ +G
Sbjct: 231 EEGDGRLGLGPGRGPNEGGGLSVPSKVKALT--VPVASVSCGGFFTMALTKEGQLWNWGA 288
Query: 439 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLF 498
+ LG GD + P V SL+G+R + ACG +H+ A+ E GK+
Sbjct: 289 NSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE------------EGKVL 336
Query: 499 TWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 558
+W + VPT + AL + ++ G S + A+T G ++ G+
Sbjct: 337 SWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDF 396
Query: 559 QLGDPKANGKLPTRVEGKLTKNFV-EEIACGDYHV 592
QLG P G LP + NF+ EE C + V
Sbjct: 397 QLGVP---G-LPEIQTTPVEVNFLTEEDECQPHKV 427
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 333 (122.3 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 78/193 (40%), Positives = 108/193 (55%)
Query: 287 AGVKMDSFVPKAVESAVVLD--VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 344
+GV M S V+ VL V+ IACGGRH+A++T G + ++G L G+ G G D
Sbjct: 295 SGVNMSS----VVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDD 350
Query: 345 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKK 404
P + +L I +E VA G HT + GD+Y +GG+ FG LG G + + LPK
Sbjct: 351 ELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQ--FGQLGTGCDQAETLPKL 408
Query: 405 LNGP-LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 463
L P LE ++V ++SCG HTAV+T G++F +G +G LG GD I + P EV +K
Sbjct: 409 LEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEV-RIKD 467
Query: 464 LRTVRAACGVWHT 476
ACG WHT
Sbjct: 468 CFPKNIACGWWHT 480
Score = 244 (91.0 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 75/245 (30%), Positives = 112/245 (45%)
Query: 411 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLK----GLR 465
G+ + SV+ G HT ++ GQ++ +G G G LG G R+ VS+P + ++ G
Sbjct: 233 GVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKA 292
Query: 466 TVRAA-------CGVWHTAAVVEVMVGXXXXXXXX-XGKLFTWXXXXXXXXXXXXKEARL 517
T CG + V ++ G G L T+ + L
Sbjct: 293 TSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDEL 352
Query: 518 VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGK 576
PTCV++L+ +V+ G T ++ G VY G +GQLG + LP +E
Sbjct: 353 SPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAP 412
Query: 577 LTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 635
+N V+ I+CG H AV+T V+ WG G+LG GD DRN P+ V +KD K
Sbjct: 413 NLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVR-IKDCFPK 471
Query: 636 SIVCG 640
+I CG
Sbjct: 472 NIACG 476
Score = 203 (76.5 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 41/138 (29%), Positives = 76/138 (55%)
Query: 292 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 351
D P V S + + ++ +A G H + G+V+++G G+LG G D + PKL+
Sbjct: 350 DELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLL 409
Query: 352 DA--LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPL 409
+A L+N+NV+ ++CG HT +T G ++ WG + +G LG G+ + P ++ +
Sbjct: 410 EAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNK--YGQLGIGDVIDRNAPAEVR--I 465
Query: 410 EGIHVSSVSCGPWHTAVV 427
+ +++CG WHT ++
Sbjct: 466 KDCFPKNIACGWWHTLLL 483
Score = 167 (63.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 42/119 (35%), Positives = 62/119 (52%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDY 590
+++CG + +T TG + T G +YGQ G + +L PT V L +EE+A G +
Sbjct: 315 KIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIR-IEEVAAGLW 373
Query: 591 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGTSFTAAI 647
H +S +VY +G G+LG G P L+EA L++ VK+I CG TA I
Sbjct: 374 HTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVI 432
Score = 95 (38.5 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V++WG + G RS + V++ +P AVES+ DV CG A +
Sbjct: 33 VYMWGY-----LPGASPQRSPLMSPVEVK--IPPAVESSWK-DVSGGGCG--FAMATAES 82
Query: 324 GEVFSWG--EELG-GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 380
G++ +WG ++LG + G + P + + V+ G H AVT + +YT
Sbjct: 83 GKLITWGSTDDLGQSYVTSGKHGETPEPFPLPP--EVCVQKAEAGWAHCVAVTENQQVYT 140
Query: 381 WGGSNC 386
WG C
Sbjct: 141 WGWREC 146
Score = 76 (31.8 bits), Expect = 9.9e-12, Sum P(2) = 9.9e-12
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 293 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG 340
S +P V A + + ++A GGRH ++ G+V+ WG G+LG G
Sbjct: 222 SALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLG 269
Score = 58 (25.5 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 59/256 (23%), Positives = 92/256 (35%)
Query: 320 VTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 379
V Q V+ WG G K+ A+++ ++ G A SG +
Sbjct: 27 VVSQRVVYMWGYLPGASPQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAESGKLI 86
Query: 380 TWGGSNC---NFGLLG-HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
TWG ++ ++ G HG P+ P E + V G H VT Q++T
Sbjct: 87 TWGSTDDLGQSYVTSGKHGET-----PEPFPLPPE-VCVQKAEAGWAHCVAVTENQQVYT 140
Query: 436 FG----DGTFGVLGH--GD----RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 485
+G T V G GD IS ST + S +G ++ + G T++ VE G
Sbjct: 141 WGWRECIPTGRVFGQVDGDSCERNISFSTEQVSSSSQGKKS---SGG---TSSQVE---G 191
Query: 486 XXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 545
++ + +P V+ V+ G T+AL+
Sbjct: 192 RGGGEPTKKRRISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSD 251
Query: 546 TGHVYTMGSPVYGQLG 561
G V+ G GQLG
Sbjct: 252 IGQVWGWGYGGEGQLG 267
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 319 (117.4 bits), Expect = 5.0e-25, P = 5.0e-25
Identities = 99/334 (29%), Positives = 150/334 (44%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSW-GEELGGRLGHGVDSDVSHP------KLIDALKNIN 358
+V +A G A VT+ G + W LG G + V P + ++ +
Sbjct: 333 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVT 392
Query: 359 VELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 417
++ VACG+ T +T G + T+G GSN G LGHG+ + P + L G + V
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSN---GCLGHGSLTDISQPTIVEALL-GYEMVQV 448
Query: 418 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTA 477
+CG H +++ +LF +G G G LG G R S S P++V G R CG+ ++
Sbjct: 449 ACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGI-DSS 507
Query: 478 AVVEVMVGXXXXXXXXXGKL-FTWXXXXXXXXXXXXKEARLVPTCV--AALVEPNFCQVS 534
++ V KL E L T + A L + +
Sbjct: 508 MILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSID 567
Query: 535 CGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVA 593
G + + A+T +G YT GS +GQLG G + P +V+G L + +ACGD
Sbjct: 568 LGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG-LEGIKMAMVACGDAFTV 626
Query: 594 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 627
+ + +EVY+WGKGA GRLG D +D P V+
Sbjct: 627 AIGAESEVYSWGKGARGRLGRRD-EDAGLPRPVQ 659
Score = 254 (94.5 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 78/317 (24%), Positives = 135/317 (42%)
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GGG G+ + F+ + +E + ++++ACG A +T +G + ++G G
Sbjct: 364 GGGSLLPGAVEQPQ-PQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGC 422
Query: 337 LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 396
LGHG +D+S P +++AL + VACG H A++ +++ WG + G LG G
Sbjct: 423 LGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDS--GRLGLGTR 480
Query: 397 MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--- 453
S P+++ P G V CG + ++T GQ G F LG D +S+
Sbjct: 481 ESHSCPQQVPMP-PGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGL-DHLSLGEEP 538
Query: 454 TP-REVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXX-XXXGKLFTWXXXXXXXXXXX 511
P ++V+ + +A ++ + +G G +T+
Sbjct: 539 VPHQQVEEALSFTLLGSA--PLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTN 596
Query: 512 XKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT 571
+ P V L V+CG + TVA+ VY+ G G+LG + LP
Sbjct: 597 TRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPR 656
Query: 572 RVEGKLTKNF-VEEIAC 587
V+ T + V ++C
Sbjct: 657 PVQLDETHPYTVTSVSC 673
Score = 254 (94.5 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 99/359 (27%), Positives = 147/359 (40%)
Query: 308 QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 367
+ I G A+ V++WG GG LG + + P L N V VA G
Sbjct: 296 RGIPRGPVRPAIPPPLSSVYAWG---GG-LG----TPLRLPML-----NTEVVQVAAGRT 342
Query: 368 HTCAVTLSGDMYTWGGSNCNFG---LLGHGNEMSL--WLPKKLNGPLEGIHVSSVSCGPW 422
VT SG + W G LL E ++ + L G G+ + V+CG +
Sbjct: 343 QKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQ-SGVTIKHVACGDF 401
Query: 423 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 482
TA +T G + TFG G+ G LGHG +S P V++L G V+ ACG H A+
Sbjct: 402 FTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLAL--- 458
Query: 483 MVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVA 542
+LF W +E+ P V +V CG ++
Sbjct: 459 ---------STERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMI 509
Query: 543 LTTTGHVYTMGSPVYGQLG-DPKANGKLPT---RVEGKLTKNFV------EE----IACG 588
LT G GS + +LG D + G+ P +VE L+ + +E I G
Sbjct: 510 LTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLG 569
Query: 589 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
H A +T+ + YT+G +G+LG P V+ L+ ++ + CG +FT AI
Sbjct: 570 TAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAI 628
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 294 (108.6 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 91/325 (28%), Positives = 136/325 (41%)
Query: 326 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 385
V +WG G+LG G D + ++DAL+ NV V G ++ A+ G ++TWG +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 386 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
G LGH E L L + + + G WH V G+ + +G +G G
Sbjct: 67 R--GTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 446 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXX 505
+ T R V + + + C T V G G ++TW
Sbjct: 125 E-EPSKDETGRPVR--RDI-VIPKRCAQQLTVRQVAAG-GTHSVVLTREGYVWTWGQPWP 179
Query: 506 XXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA 565
K+ VP V L V H+L AL G ++ G+ YGQLG
Sbjct: 180 PGDI---KQIS-VPVRVQGLENVRLIAVGAFHNL--ALKEDGTLWAWGNNEYGQLGTGDT 233
Query: 566 NGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD--DRNF 622
+ P V+G L + +IA G +H LT+ EVY WG+G +GRLG GD D +
Sbjct: 234 QPRSYPIPVQG-LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKML 292
Query: 623 PSLVEALKDKQVKSIVCGTSFTAAI 647
P V L + + + CG + + A+
Sbjct: 293 PQKVNLLAGEDIIQVSCGGTHSVAL 317
Score = 287 (106.1 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 90/352 (25%), Positives = 155/352 (44%)
Query: 275 ILGGGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 333
++ G G G + + V++ +V+++ G R++ + G++F+WG
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 334 GGRLGHGVDSDV-SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG 392
G LGH ++ S P L+ +L N+ + A G H AV G Y WGG+ +G G
Sbjct: 67 RGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNE--YGQCG 124
Query: 393 HG---NEMSLWLPKKLNGP---LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 446
+E + + + P + + V V+ G H+ V+T G ++T+G
Sbjct: 125 EEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPW----PP 180
Query: 447 GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXX 506
GD +S P V L+ +R + A G +H A+ E G L+ W
Sbjct: 181 GDIKQISVPVRVQGLENVRLI--AVGAFHNLALKE------------DGTLWAWGNNEYG 226
Query: 507 XXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DP 563
+ R P V L + ++ G + ALT G VY G +G+LG +
Sbjct: 227 QLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDND 286
Query: 564 KANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 615
K++ LP +V L + +++CG H LT ++++G+G +GRLG+G
Sbjct: 287 KSSKMLPQKVN-LLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Score = 230 (86.0 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 54/165 (32%), Positives = 90/165 (54%)
Query: 295 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 354
VP V+ + +V+ IA G H + + G +++WG G+LG G S+P + L
Sbjct: 188 VPVRVQG--LENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGL 245
Query: 355 KNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 413
++ + +A G H+ A+T G++Y WG G + G G ++ S LP+K+N L G
Sbjct: 246 DDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGF-GDNDKSSKMLPQKVN-LLAGED 303
Query: 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 458
+ VSCG H+ +T G++F+FG G G LG+G +++ P E+
Sbjct: 304 IIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLEL 348
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 331 (121.6 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 107/347 (30%), Positives = 158/347 (45%)
Query: 311 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 370
A G RH+ L+ V S G+ G+LG P+ I AL+ + V+LV+CG+ H+
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88
Query: 371 AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 429
AV G ++ WG GS G+ G E+S + PKK+ L I + VSCG +H+ ++
Sbjct: 89 AVCHKGRVFAWGAGSEGQLGI-GEFKEIS-FTPKKIM-TLNDIKIIQVSCGHYHSLALSK 145
Query: 430 AGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
Q+F++G + G LG G S ++P+ V SL+G+ + A G H+ A+
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL--------- 196
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEARLV---PTCVAALVEPNFCQVSCGHSLTVALTT 545
G F W + + P V AL +SCG + T LT
Sbjct: 197 ---SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQ 253
Query: 546 TGHVYTMGSPVYGQLG---DPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT-E 600
G V+T G GQLG P+ G +L R++G V +I CG YH T +
Sbjct: 254 DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQ 308
Query: 601 VYTWGKGAN--GRLGHGDTDDRNFP--SLVEA--LKDKQVKSIVCGT 641
V ++G G + + H + NF L+ A D QVK I GT
Sbjct: 309 VVSFGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGT 355
Score = 279 (103.3 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 73/219 (33%), Positives = 115/219 (52%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG +G LG G + + SF PK + + + + ++CG H+ ++K
Sbjct: 96 VFAWG-AGSEGQLG-----IGEFKEI---SFTPKKIMTLNDIKIIQVSCGHYHSLALSKD 146
Query: 324 GEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
+VFSWG+ G+LG G + + P+ + +L+ I + VA G H+ A++L G + WG
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206
Query: 383 GSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
SN L G + + K L+ G L+ + V +SCG HTAV+T G++FTFGD
Sbjct: 207 -SNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRS 265
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
G LG+ P+ V+ + GL + + CG +HT A V
Sbjct: 266 GQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYV 303
Score = 263 (97.6 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 77/265 (29%), Positives = 127/265 (47%)
Query: 295 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDA 353
+P+ +++ L V ++CG H+ V +G VF+WG G+LG G ++S PK I
Sbjct: 65 LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT 124
Query: 354 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEGI 412
L +I + V+CG +H+ A++ +++WG ++ G LG G E S P+++ LEGI
Sbjct: 125 LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNS--HGQLGLGKEFPSQASPQRVRS-LEGI 181
Query: 413 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRISVST--PREVDSLKGLRTVRA 469
++ V+ G H+ ++ G F +G + G L G + V + P V +LK L V
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYI 241
Query: 470 ACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPN 529
+CG HTA + + GK+FT+ + P V ++
Sbjct: 242 SCGDAHTAVLTQ------------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVER-IDGL 288
Query: 530 FCQVSCGHSLTVALT-TTGHVYTMG 553
Q+ CG T+A TTG V + G
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 171 (65.3 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 63/243 (25%), Positives = 99/243 (40%)
Query: 411 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 470
G + + G H+ ++ + ++ + GD + G LG P + +L+ L +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 471 CGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXX-KEARLVPTCVAALVEPN 529
CG H+ AV G++F W KE P + L +
Sbjct: 82 CGKEHSLAVCH------------KGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK 129
Query: 530 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA--NGKLPTRVEGKLTKNFVEEIAC 587
QVSCGH ++AL+ V++ G +GQLG K + P RV L + ++A
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAA 188
Query: 588 GDYHVAVLTSRTEVYTWGKGANGRL---GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 644
G H L+ + WG + G+L G N P V ALK+ V I CG + T
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHT 248
Query: 645 AAI 647
A +
Sbjct: 249 AVL 251
Score = 140 (54.3 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 34/111 (30%), Positives = 61/111 (54%)
Query: 277 GGGIHRSGSYA----GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEE 332
G G + +G A V + S P +V + L V I+CG H A++T+ G+VF++G+
Sbjct: 204 GWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDN 263
Query: 333 LGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWG 382
G+LG+ + P+L++ + + V + CG +HT A V +G + ++G
Sbjct: 264 RSGQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 42 (19.8 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 26/90 (28%), Positives = 37/90 (41%)
Query: 986 FGDNRSPSQT-EASHCEATTKNKNRT--MKAEPAQGDEWVEQDETGVYITLVALPGGLKD 1042
FG PS T + +H EA T+N + + + AE D V+ G Y V +D
Sbjct: 312 FG--HGPSDTSKPTHPEALTENFDISCLISAEDFV-DVQVKHIFAGTYANFVTTH---QD 365
Query: 1043 LKRVRFSRK------KFSEKQAEQWWAANR 1066
R K + S+ AE+W A R
Sbjct: 366 TSSTRAPGKTLPEISRISQSMAEKWIAVKR 395
Score = 37 (18.1 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 20/96 (20%), Positives = 38/96 (39%)
Query: 858 VVDDAKRTSEEVIKLRAQVEELTRKSQ---------LQEIELERTTRQLKEALAVAGEET 908
V+ D+K V+ V E++++S LQE L + LK A+
Sbjct: 490 VMHDSKNWKNLVVPFAKAVCEMSKQSLQVLKKCWAFLQESSLNPLIQMLKAAIISQLLHQ 549
Query: 909 AKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFH 944
K +K+L +K++ ++ N+F+
Sbjct: 550 TKTEQDHCNVKALLGMMKELHKVNKANCRLPENTFN 585
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 311 (114.5 bits), Expect = 3.8e-24, P = 3.8e-24
Identities = 103/349 (29%), Positives = 155/349 (44%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSW-----GEELGGRLGHGVDSDVSH--PKLIDALKNIN 358
+V +A G A VT+ G + W G G L V+ + ++ +
Sbjct: 339 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSRFLEGQSGVT 398
Query: 359 VELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 417
++ VACG+ T +T G + T+G GSN G LGHG + P + L G + V
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSN---GCLGHGGLNDISQPTIVEALL-GYEMVQV 454
Query: 418 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTA 477
+CG H +++ +LF +G G G LG G R S S P++V G R CG+ ++
Sbjct: 455 ACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVPMPPGQEAQRVICGI-DSS 513
Query: 478 AVVEVMVGXXXXXXXXXGKLFT--WXXXXXXXXXXXXKEA-RLVPTCVAALVEPNFCQVS 534
++ V KL +EA P A L + V
Sbjct: 514 VILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPLGSAPLDQEPLLSVD 573
Query: 535 CGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVA 593
G + + A+T +G YT GS +GQLG + + + P +V+G L + +ACGD
Sbjct: 574 LGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQG-LQGIKIAMVACGDAFTV 632
Query: 594 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ---VKSIVC 639
+ + EVY+WGKGA GRLG D +D P V+ L + Q V S+ C
Sbjct: 633 AIGAEGEVYSWGKGARGRLGRRD-EDAALPRPVQ-LDETQPYTVTSVSC 679
Score = 266 (98.7 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 79/315 (25%), Positives = 132/315 (41%)
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GGG G+ + FV + +E + ++++ACG A +T +G + ++G G
Sbjct: 370 GGGALLPGAVEQ-QQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGC 428
Query: 337 LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 396
LGHG +D+S P +++AL + VACG H A++ +++ WG + G LG G
Sbjct: 429 LGHGGLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDG--GRLGLGTR 486
Query: 397 MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPR 456
S P+++ P G V CG + ++T GQ G F LG D +S+
Sbjct: 487 ESHSCPQQVPMP-PGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGL-DHLSLGEEP 544
Query: 457 EVDSL--KGLRTVRAACGVWHTAAVVEVMVGXXXXXX-XXXGKLFTWXXXXXXXXXXXXK 513
+ + L ++ V +G G +T+ +
Sbjct: 545 ALHQQVEEALNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNAR 604
Query: 514 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV 573
P V L V+CG + TVA+ G VY+ G G+LG + LP V
Sbjct: 605 RVSRAPCQVQGLQGIKIAMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAALPRPV 664
Query: 574 EGKLTKNF-VEEIAC 587
+ T+ + V ++C
Sbjct: 665 QLDETQPYTVTSVSC 679
Score = 247 (92.0 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 99/356 (27%), Positives = 143/356 (40%)
Query: 313 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 372
G A+ V++WG GG +S P + L N V VA G V
Sbjct: 307 GPARPAIPPPLSSVYTWG---GG---------LSAPLRLPML-NTEVVQVAAGRTQKAGV 353
Query: 373 TLSGDMYTWGGSNCNFG---LLGHGNEMSL--WLPKKLNGPLEGIHVSSVSCGPWHTAVV 427
T SG + W G LL E ++ + L G G+ + V+CG TA +
Sbjct: 354 TRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSRFLEGQ-SGVTIKHVACGDLFTACL 412
Query: 428 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXX 487
T G + TFG G+ G LGHG +S P V++L G V+ ACG H A+
Sbjct: 413 TDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQVACGASHVLAL-------- 464
Query: 488 XXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 547
+LF W +E+ P V +V CG +V LT G
Sbjct: 465 ----STERELFAWGRGDGGRLGLGTRESHSCPQQVPMPPGQEAQRVICGIDSSVILTVPG 520
Query: 548 HVYTMGSPVYGQLG-DPKANGKLPT---RVEGKLTKNFV--------EE----IACGDYH 591
GS + +LG D + G+ P +VE L NF +E + G H
Sbjct: 521 QALACGSNRFNKLGLDHLSLGEEPALHQQVEEAL--NFTPLGSAPLDQEPLLSVDLGTAH 578
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
A +T+ + YT+G +G+LG P V+ L+ ++ + CG +FT AI
Sbjct: 579 SAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQGIKIAMVACGDAFTVAI 634
Score = 157 (60.3 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 43/154 (27%), Positives = 72/154 (46%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE-------- 583
QV+ G + +T +G + +P G G G + + + + F+E
Sbjct: 342 QVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQ-QPQFVSRFLEGQSGVTIK 400
Query: 584 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 643
+ACGD A LT R + T+G G+NG LGHG +D + P++VEAL ++ + CG S
Sbjct: 401 HVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQVACGASH 460
Query: 644 TAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 677
A+ + + + G R+ R+ H+C
Sbjct: 461 VLALSTERELFAWGRG--DGGRLGLG-TRESHSC 491
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 322 (118.4 bits), Expect = 8.4e-24, Sum P(2) = 8.4e-24
Identities = 65/176 (36%), Positives = 106/176 (60%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVAC 364
++ I CG H+ ++K GE+F+WG+ L G+LG G + + S P++++ L + + ++
Sbjct: 149 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 208
Query: 365 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 424
GE H+ A+++SG++Y+WG ++C G LG G+ + P + L+ V ++CG HT
Sbjct: 209 GEAHSMALSMSGNVYSWGRNDC--GQLGLGHTYNKESPSCIEA-LDDQKVEFLACGGCHT 265
Query: 425 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
A++T +G +FTFGDG +G LGH + PR V L G R + ACG HT A V
Sbjct: 266 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYV 321
Score = 266 (98.7 bits), Expect = 9.9e-18, Sum P(2) = 9.9e-18
Identities = 69/231 (29%), Positives = 114/231 (49%)
Query: 409 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRT 466
L+ ++ ++CG +H+ ++ G+LF +G G LG G RI S STP V++L G+
Sbjct: 145 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVG-RIFASTSTPEIVENLSGVPL 203
Query: 467 VRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALV 526
V+ + G H+ A+ G +++W + P+C+ AL
Sbjct: 204 VQISAGEAHSMAL------------SMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALD 251
Query: 527 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIA 586
+ ++CG T LT +G V+T G YGQLG +L R+ L N V +IA
Sbjct: 252 DQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIA 311
Query: 587 CGDYHVAVLTSRT-EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKS 636
CG H S T +V+++G G G+LG+G T ++ P ++ L +++KS
Sbjct: 312 CGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEELKS 362
Score = 256 (95.2 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 69/200 (34%), Positives = 104/200 (52%)
Query: 264 VFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
+F WG+ DG LG G I S S P+ VE+ + + I+ G H+ ++
Sbjct: 169 LFAWGQNL-DGQLGVGRIFASTS---------TPEIVENLSGVPLVQISAGEAHSMALSM 218
Query: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G V+SWG G+LG G + P I+AL + VE +ACG HT +T SG ++T+G
Sbjct: 219 SGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFG 278
Query: 383 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGTF 441
+G LGH + + P+ + G L G V+ ++CG HT A V+ G++F+FG G
Sbjct: 279 DGK--YGQLGHNSTQNELRPRLVTG-LVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKE 335
Query: 442 GVLGHGDRISVSTPREVDSL 461
G LG+G + PR + L
Sbjct: 336 GQLGNGGTRNQLIPRPMKLL 355
Score = 188 (71.2 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 53/154 (34%), Positives = 72/154 (46%)
Query: 495 GKLFTWXXXXXXXXXXXXKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 553
G+LF W A P V L Q+S G + ++AL+ +G+VY+ G
Sbjct: 167 GELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWG 226
Query: 554 SPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 612
GQLG N + P+ +E L VE +ACG H A+LT V+T+G G G+L
Sbjct: 227 RNDCGQLGLGHTYNKESPSCIEA-LDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQL 285
Query: 613 GHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
GH T + P LV L +V I CG T A
Sbjct: 286 GHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLA 319
Score = 182 (69.1 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 44/129 (34%), Positives = 72/129 (55%)
Query: 521 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLT 578
C+ L E N Q++CG ++AL+ G ++ G + GQLG + A+ P VE L+
Sbjct: 143 CI--LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVEN-LS 199
Query: 579 KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 638
+ +I+ G+ H L+ VY+WG+ G+LG G T ++ PS +EAL D++V+ +
Sbjct: 200 GVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLA 259
Query: 639 CGTSFTAAI 647
CG TA +
Sbjct: 260 CGGCHTALL 268
Score = 161 (61.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 40/186 (21%), Positives = 87/186 (46%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
PK ++ + + ++ G H +++ G+ F + + H + L+
Sbjct: 99 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQ 146
Query: 356 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 415
N+ + CG++H+ A++ G+++ WG N + G LG G + ++ L G+ +
Sbjct: 147 EKNIIQITCGDYHSLALSKGGELFAWG-QNLD-GQLGVGRIFASTSTPEIVENLSGVPLV 204
Query: 416 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 475
+S G H+ ++ +G ++++G G LG G + +P +++L + ACG H
Sbjct: 205 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCH 264
Query: 476 TAAVVE 481
TA + +
Sbjct: 265 TALLTK 270
Score = 40 (19.1 bits), Expect = 8.4e-24, Sum P(2) = 8.4e-24
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 904 AGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSS-PT 948
+ E + +A +V+K L + K A M G V S SS PT
Sbjct: 570 SSENNSHIKALLEVLKKLYREKKFRACMRLAGIVDQERSALSSLPT 615
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 306 (112.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 100/348 (28%), Positives = 152/348 (43%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSW-----GEELGGRLGHGVDSDVSH--PKLIDALKNIN 358
+V +A G A VT+ G + W G G L V+ + ++ +
Sbjct: 342 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSRFLEGQSGVT 401
Query: 359 VELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 417
++ VACG+ T +T G + T+G GSN G LGHG+ + P + L G + V
Sbjct: 402 IKHVACGDLFTACLTDRGIIMTFGSGSN---GCLGHGSLNDISQPTIVEALL-GYEMVQV 457
Query: 418 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTA 477
+CG H +++ +LF +G G G LG G R S S P++V G R CG+ ++
Sbjct: 458 ACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGI-DSS 516
Query: 478 AVVEVMVGXXXXXXXXXGKLFT--WXXXXXXXXXXXXKEA-RLVPTCVAALVEPNFCQVS 534
++ V KL +EA P A V
Sbjct: 517 MILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDREPLLSVD 576
Query: 535 CGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVA 593
G + + A+T +G YT GS +GQLG + + + P +V+G L + +ACGD
Sbjct: 577 LGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQG-LQNIKIAMVACGDAFTV 635
Query: 594 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVC 639
+ + EVY+WGKGA GRLG D +D P V+ + V S+ C
Sbjct: 636 AVGAEGEVYSWGKGARGRLGRRD-EDAGLPRPVQLDEIHPYTVTSVSC 682
Score = 270 (100.1 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 79/315 (25%), Positives = 135/315 (42%)
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GGG G+ + FV + +E + ++++ACG A +T +G + ++G G
Sbjct: 373 GGGALLPGAVEQ-QQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGC 431
Query: 337 LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 396
LGHG +D+S P +++AL + VACG H A++ +++ WG + G LG G
Sbjct: 432 LGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDG--GRLGLGTR 489
Query: 397 MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST-P 455
S P++++ P G V CG + ++T G+ G F LG DR+S+ P
Sbjct: 490 ESHSCPQQVSMP-PGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGL-DRLSLGEEP 547
Query: 456 REVDSLK-GLRTVRAACGVWHTAAVVEVMVGXXXXXX-XXXGKLFTWXXXXXXXXXXXXK 513
++ L + ++ V +G G +T+ +
Sbjct: 548 APNQQVEEALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNAR 607
Query: 514 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV 573
P V L V+CG + TVA+ G VY+ G G+LG + LP V
Sbjct: 608 RVSRAPCQVQGLQNIKIAMVACGDAFTVAVGAEGEVYSWGKGARGRLGRRDEDAGLPRPV 667
Query: 574 E-GKLTKNFVEEIAC 587
+ ++ V ++C
Sbjct: 668 QLDEIHPYTVTSVSC 682
Score = 249 (92.7 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 89/322 (27%), Positives = 134/322 (41%)
Query: 345 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFG---LLGHGNEMSL-- 399
+S P + L N V VA G VT SG + W G LL E
Sbjct: 330 LSAPLRLPML-NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQ 388
Query: 400 WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD 459
++ + L G G+ + V+CG TA +T G + TFG G+ G LGHG +S P V+
Sbjct: 389 FVSRFLEGQ-SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVE 447
Query: 460 SLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVP 519
+L G V+ ACG H A+ +LF W +E+ P
Sbjct: 448 ALLGYEMVQVACGASHVLAL------------STERELFAWGRGDGGRLGLGTRESHSCP 495
Query: 520 TCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPT---RVEG 575
V+ +V CG ++ LT G GS + +LG D + G+ P +VE
Sbjct: 496 QQVSMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEE 555
Query: 576 KLTKN------FVEE----IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSL 625
L+ F E + G H A +T+ + YT+G +G+LG P
Sbjct: 556 ALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQ 615
Query: 626 VEALKDKQVKSIVCGTSFTAAI 647
V+ L++ ++ + CG +FT A+
Sbjct: 616 VQGLQNIKIAMVACGDAFTVAV 637
Score = 158 (60.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 43/154 (27%), Positives = 72/154 (46%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE-------- 583
QV+ G + +T +G + +P G G G + + + + F+E
Sbjct: 345 QVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQ-QPQFVSRFLEGQSGVTIK 403
Query: 584 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 643
+ACGD A LT R + T+G G+NG LGHG +D + P++VEAL ++ + CG S
Sbjct: 404 HVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASH 463
Query: 644 TAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNC 677
A+ + + + G R+ R+ H+C
Sbjct: 464 VLALSTERELFAWGRG--DGGRLGLG-TRESHSC 494
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 265 (98.3 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 81/316 (25%), Positives = 136/316 (43%)
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GGG G+ + FV + +E + ++++ACG A +T +G + ++G G
Sbjct: 370 GGGTLLPGAVE-LPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGC 428
Query: 337 LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 396
LGHG +D+S P +++AL + VACG H A++ G+++ WG + G LG G
Sbjct: 429 LGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDG--GRLGLGTR 486
Query: 397 MSLWLPKKLNGPLE-GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST- 454
S P+++ P+ G V CG + ++TS G++ G F LG D +S+
Sbjct: 487 ESHNCPQQV--PVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGL-DHLSLDEE 543
Query: 455 PREVDSLK-GLRTVRAACGVWHTAAVVEVMVGXXXXXX-XXXGKLFTWXXXXXXXXXXXX 512
P ++ L ++ V +G G +T+
Sbjct: 544 PVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSS 603
Query: 513 KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTR 572
+ P V L V+CG + TVA+ G VY+ G G+LG + LP
Sbjct: 604 RRVSRAPCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRP 663
Query: 573 VEGKLTKNF-VEEIAC 587
V+ T + V ++C
Sbjct: 664 VQLDETHPYMVTSVSC 679
Score = 263 (97.6 bits), Expect = 6.4e-19, P = 6.4e-19
Identities = 92/329 (27%), Positives = 139/329 (42%)
Query: 338 GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFG---LLGHG 394
G G+ S + P L N V VA G VT SG + W G LL
Sbjct: 324 GGGLSSPLRLPML-----NTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGA 378
Query: 395 NEMSL--WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV 452
E+ ++ + L G G+ + V+CG TA +T G + TFG G+ G LGHG+ +
Sbjct: 379 VELPQPQFVSRFLEGQ-SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDI 437
Query: 453 STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXX 512
S P V++L G V+ ACG H A+ G+LF W
Sbjct: 438 SQPTIVEALLGYEMVQVACGASHVLAL------------STDGELFAWGRGDGGRLGLGT 485
Query: 513 KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPT 571
+E+ P V +V CG ++ LT+ G V GS + +LG D + + P
Sbjct: 486 RESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPV 545
Query: 572 ---RVEGKLTKNFV-------EEIAC---GDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 618
+VE L+ + E + C G H A +T+ + YT+G +G+LG
Sbjct: 546 PYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRR 605
Query: 619 DRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
P V+ L+ ++ + CG +FT A+
Sbjct: 606 VSRAPCRVQGLEGIKMVMVACGDAFTVAV 634
Score = 193 (73.0 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 55/176 (31%), Positives = 83/176 (47%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSW-GEELGGRLGHGVDSDVSHP------KLIDALKNIN 358
+V +A G A VT+ G + W LG G + V P + ++ +
Sbjct: 339 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELPQPQFVSRFLEGQSGVT 398
Query: 359 VELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 417
++ VACG+ T +T G + T+G GSN G LGHGN + P + L G + V
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSN---GCLGHGNLTDISQPTIVEALL-GYEMVQV 454
Query: 418 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 473
+CG H +++ G+LF +G G G LG G R S + P++V G R CG+
Sbjct: 455 ACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGI 510
Score = 167 (63.8 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 40/102 (39%), Positives = 53/102 (51%)
Query: 527 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEI 585
EP C V G + + A+T +G YT GS +GQLG + P RV+G V +
Sbjct: 567 EPLLC-VDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVM-V 624
Query: 586 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 627
ACGD + + EVY+WGKG GRLG D +D P V+
Sbjct: 625 ACGDAFTVAVGAEGEVYSWGKGTRGRLGRRD-EDAGLPRPVQ 665
Score = 163 (62.4 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 50/158 (31%), Positives = 76/158 (48%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG--KLP-----TR-VEGKLTKNFVE 583
QV+ G + +T +G + +P G G G +LP +R +EG+ ++
Sbjct: 342 QVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELPQPQFVSRFLEGQSGVT-IK 400
Query: 584 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 643
+ACGD A LT R + T+G G+NG LGHG+ D + P++VEAL ++ + CG S
Sbjct: 401 HVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASH 460
Query: 644 TAAIC----LHKWVSGVDQSMCSGCRIPFNFKRKRHNC 677
A+ L W G G R+ R+ HNC
Sbjct: 461 VLALSTDGELFAWGRG------DGGRLGLG-TRESHNC 491
Score = 43 (20.2 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 168 KDGLDPLHLHTSYESPPKNVLDKALSDAVLYAAP 201
K GLD HL E P +++ALS L +AP
Sbjct: 532 KLGLD--HLSLDEEPVPYQQVEEALSFTPLGSAP 563
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 304 (112.1 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 97/334 (29%), Positives = 148/334 (44%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSW-GEELGGRLGHGVDSDVSHP------KLIDALKNIN 358
+V +A G A VT+ G + W LG G + + P + ++ +
Sbjct: 341 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAIEQPQPQFVSRFLEGQSGVT 400
Query: 359 VELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 417
++ VACG+ T +T G + T+G GSN G LGHG+ + P + L G + V
Sbjct: 401 IKHVACGDLFTACLTDRGIIMTFGSGSN---GCLGHGSLNDISQPTIVEALL-GYEMVQV 456
Query: 418 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTA 477
+CG H +++ +LF +G G G LG G R S P+ V G R CG+ ++
Sbjct: 457 ACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGI-DSS 515
Query: 478 AVVEVMVGXXXXXXXXXGKLFT--WXXXXXXXXXXXXKEA-RLVPTCVAALVEPNFCQVS 534
++ V KL +EA P A L + V
Sbjct: 516 MILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVD 575
Query: 535 CGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVA 593
G + ++ LT +G YT GS +GQLG + + + P RV+G L + +ACGD
Sbjct: 576 LGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQG-LQGIKISTVACGDAFTV 634
Query: 594 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 627
+ + EV++WGKGA GRLG D +D P V+
Sbjct: 635 AIGAEGEVFSWGKGARGRLGRKD-EDAGLPRPVQ 667
Score = 258 (95.9 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 96/354 (27%), Positives = 144/354 (40%)
Query: 313 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 372
G A+ V++WG GG +S P + L N V VA G V
Sbjct: 309 GPARPAIPPPLSSVYTWG---GG---------LSAPLRLPML-NTEVVQVAAGRTQKAGV 355
Query: 373 TLSGDMYTWGGSNCNFG---LLGHGNEMSL--WLPKKLNGPLEGIHVSSVSCGPWHTAVV 427
T SG + W G LL E ++ + L G G+ + V+CG TA +
Sbjct: 356 TRSGRLILWEAPPLGAGGGALLPGAIEQPQPQFVSRFLEGQ-SGVTIKHVACGDLFTACL 414
Query: 428 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXX 487
T G + TFG G+ G LGHG +S P V++L G V+ ACG H A+
Sbjct: 415 TDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLAL-------- 466
Query: 488 XXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 547
+LF W +E+ P V +V CG ++ LT G
Sbjct: 467 ----STERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPG 522
Query: 548 HVYTMGSPVYGQLG-DPKANGKLPT---RVEGKLT----------KNFVEEIACGDYHVA 593
GS + +LG DP + G+ P +VE +T + + + G H
Sbjct: 523 QALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSL 582
Query: 594 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
+LT+ + YT+G +G+LG P V+ L+ ++ ++ CG +FT AI
Sbjct: 583 LLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQGLQGIKISTVACGDAFTVAI 636
Score = 248 (92.4 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 79/315 (25%), Positives = 131/315 (41%)
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GGG G+ + FV + +E + ++++ACG A +T +G + ++G G
Sbjct: 372 GGGALLPGAIEQPQ-PQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGC 430
Query: 337 LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 396
LGHG +D+S P +++AL + VACG H A++ +++ WG + G LG G
Sbjct: 431 LGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDG--GRLGLGTR 488
Query: 397 MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST-P 455
S P+ + P G V CG + ++T GQ G F LG D +S+ P
Sbjct: 489 ESHCCPQLVPMP-PGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGL-DPLSLGEEP 546
Query: 456 REVDSLKGLRTVRA-ACGVWHTAAVVEVMVG-XXXXXXXXXGKLFTWXXXXXXXXXXXXK 513
++ T ++ V +G G +T+ +
Sbjct: 547 APHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNAR 606
Query: 514 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV 573
P V L V+CG + TVA+ G V++ G G+LG + LP V
Sbjct: 607 RVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRPV 666
Query: 574 EGKLTKNF-VEEIAC 587
+ T + V ++C
Sbjct: 667 QLDETHPYTVTSVSC 681
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 321 (118.1 bits), Expect = 4.3e-23, Sum P(3) = 4.3e-23
Identities = 98/340 (28%), Positives = 161/340 (47%)
Query: 309 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 368
+I+CG H+A VT+QG +F +G+ G+LG + V+ P + LK + VACG H
Sbjct: 38 HISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDH 97
Query: 369 TCAVTLSGDMYTWGG-SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 427
T T G++ GG S+ GL GH N+ + ++L + + +S G +A +
Sbjct: 98 TLVSTSQGEILAAGGNSDGQLGL-GHCNDSISF--QRLRPFCDYAPIKLLSAGDHTSAAL 154
Query: 428 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXX 487
T G+LF +GD + G LG G+ P+E++ + + V +CG H+A V +
Sbjct: 155 TEDGRLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHWV--SCGYRHSALVTD------ 206
Query: 488 XXXXXXXGKLFTWXXXXXXXXXXXXKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTT 545
G ++++ + P V +L + QV+CG T+ALT
Sbjct: 207 ------SGDVYSFGESADGRLGLSAHQLANHSYPQRVESL--HSVLQVACGGKHTLALTE 258
Query: 546 TG-HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 604
+ + G LG P V G K V + CG+ H A++T +YT+
Sbjct: 259 DELYCFGGGEFGQLGLGTLVFVADSPVAV-GHFRKGRVTHVTCGEQHSALITDSGLLYTF 317
Query: 605 GKGANGRLGHGDTDDRN-F-PSLVEALKDKQVKSIVCGTS 642
G G +G+LGHGD + N F P++ + + V ++ CG+S
Sbjct: 318 GDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSS 357
Score = 286 (105.7 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
Identities = 87/293 (29%), Positives = 139/293 (47%)
Query: 308 QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVACGE 366
Q++ACG H + T QGE+ + G G+LG G +D +S +L ++L++ G+
Sbjct: 89 QSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGD 148
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 426
H + A+T G ++ WG ++ G LG GN+ LPK+LN + IH VSCG H+A+
Sbjct: 149 HTSAALTEDGRLFLWGDNSA--GQLGFGNDSHALLPKELNMG-QSIHW--VSCGYRHSAL 203
Query: 427 VTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 483
VT +G +++FG DG G+ H + S P+ V+SL + ++ ACG HT A+ E
Sbjct: 204 VTDSGDVYSFGESADGRLGLSAH-QLANHSYPQRVESLHSV--LQVACGGKHTLALTEDE 260
Query: 484 VGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 543
+ G+L P V + V+CG + +
Sbjct: 261 L--YCFGGGEFGQLGLGTLVFVADS----------PVAVGHFRKGRVTHVTCGEQHSALI 308
Query: 544 TTTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAV 594
T +G +YT G +G+LG D + V + + V +ACG H+ V
Sbjct: 309 TDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSHMLV 361
Score = 269 (99.8 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 74/216 (34%), Positives = 113/216 (52%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
+F+WG+ + G LG G + S+A +PK + + ++CG RH+ALVT
Sbjct: 160 LFLWGDNSA-GQLGFG---NDSHA------LLPKELNMGQ--SIHWVSCGYRHSALVTDS 207
Query: 324 GEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 381
G+V+S+GE GRLG +H P+ +++L ++ ++ VACG HT A+T ++Y +
Sbjct: 208 GDVYSFGESADGRLGLSAHQLANHSYPQRVESLHSV-LQ-VACGGKHTLALT-EDELYCF 264
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
GG FG LG G + + G V+ V+CG H+A++T +G L+TFGDG
Sbjct: 265 GGGE--FGQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALITDSGLLYTFGDGRH 322
Query: 442 GVLGHGDRISVS--TPREVDSLKGLRTVRAACGVWH 475
G LGHGD + TP + ACG H
Sbjct: 323 GKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSH 358
Score = 226 (84.6 bits), Expect = 5.6e-13, Sum P(3) = 5.6e-13
Identities = 67/212 (31%), Positives = 108/212 (50%)
Query: 273 DGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEE 332
DG LG G H + S + ++ F A ++ ++ G +A +T+ G +F WG+
Sbjct: 115 DGQLGLG-HCNDSISFQRLRPFCDYA-------PIKLLSAGDHTSAALTEDGRLFLWGDN 166
Query: 333 LGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS-NCNFGLL 391
G+LG G DS PK ++ ++I+ V+CG H+ VT SGD+Y++G S + GL
Sbjct: 167 SAGQLGFGNDSHALLPKELNMGQSIH--WVSCGYRHSALVTDSGDVYSFGESADGRLGLS 224
Query: 392 GHGNEMSLWLPKKLNGPLEGIH-VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 450
H + P+++ E +H V V+CG HT +T +L+ FG G FG LG G +
Sbjct: 225 AHQLANHSY-PQRV----ESLHSVLQVACGGKHTLALTE-DELYCFGGGEFGQLGLGTLV 278
Query: 451 SVS-TPREVDSLKGLRTVRAACGVWHTAAVVE 481
V+ +P V + R CG H+A + +
Sbjct: 279 FVADSPVAVGHFRKGRVTHVTCGEQHSALITD 310
Score = 54 (24.1 bits), Expect = 4.3e-23, Sum P(3) = 4.3e-23
Identities = 37/157 (23%), Positives = 58/157 (36%)
Query: 860 DDAKRTSEEVIKLRAQVEELTRKSQLQEIELERTT-RQLKEALAVAGEETAKCRAAKDVI 918
D + T IK+ LT S +QE+E RTT +E + +E A
Sbjct: 656 DTEQETKSSSIKI-----PLT-SSSVQEVEKVRTTPTSTQEVQSPISKEAGIPEKAS--- 706
Query: 919 KSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPXXXXXX 978
K + + +K + EM P G + S PTP D+ + IE + + P
Sbjct: 707 KRVNSPIK-VQEM-PTGEMEVSKV---KPTPQSDIEPS-IETLINTQEQRNLTPVKITAE 760
Query: 979 XXXXXXDFGDNRSPSQTEASHCEATTKNKNRTMKAEP 1015
G+ + T + H KNK ++ P
Sbjct: 761 MQSTLKK-GNEKMDVNTPSDHTAKKAKNKRTAVERGP 796
Score = 49 (22.3 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 25/123 (20%), Positives = 47/123 (38%)
Query: 850 SGLASPKIVVDDAK-RTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEET 908
S +PK + DA TS V+ +T+ + +E + L + + EE
Sbjct: 471 SAKGTPKHINTDAPVDTSITVLSKEPSFTPITKSPDDCQC-VETSENSLSDKNSAGREEN 529
Query: 909 AKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQ 968
+A ++ + + E + +SN H P P ++A +E+ SS Q
Sbjct: 530 VFQQALPTELQVASVSHPSITE-----SQSSSNLMHKKPRPGDAENNAEVEEQSSVTALQ 584
Query: 969 GAI 971
+
Sbjct: 585 SKV 587
Score = 45 (20.9 bits), Expect = 1.7e-21, Sum P(4) = 1.7e-21
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 616 DTDDRNFPSLVEALKDKQVKSIV 638
+TDDRN +VE L+++ V V
Sbjct: 1048 ETDDRNKQEIVEDLQNELVSDKV 1070
Score = 42 (19.8 bits), Expect = 7.3e-22, Sum P(3) = 7.3e-22
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 863 KRTSEE---VIKLRAQVEE-LTRKSQLQEIELERTTRQLKEALAVAGEETAK 910
KRT+ E + +L Q L+ +Q ++E E ++ QL+ A+ E T K
Sbjct: 788 KRTAVERGPIAELSPQTPSPLSVSTQKSKVEPENSSLQLRSAMQTQ-EATEK 838
Score = 40 (19.1 bits), Expect = 5.4e-21, Sum P(4) = 5.4e-21
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 754 SHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLP 788
S +Q ++M++ + E G + N Q + R P
Sbjct: 822 SSLQLRSAMQTQEATEKGETNSNSPQS-SENRSFP 855
Score = 39 (18.8 bits), Expect = 1.7e-21, Sum P(4) = 1.7e-21
Identities = 13/59 (22%), Positives = 29/59 (49%)
Query: 861 DAKRTSEEVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVA--GEETAKCRAAKDV 917
+ ++ EV + +E ++Q +E E E ++KE + GEE+ + + ++V
Sbjct: 1269 EGEQEESEVGNEDEENQEEEEENQTKEEEEEENNEEMKEENSSEDEGEESVREKEEQEV 1327
Score = 38 (18.4 bits), Expect = 2.1e-21, Sum P(4) = 2.1e-21
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 877 EELTRKSQLQEIELERTTRQLKE 899
EE R+ + QE+E E+ + + E
Sbjct: 1316 EESVREKEEQEVEEEKLSEEGSE 1338
Score = 37 (18.1 bits), Expect = 4.3e-23, Sum P(3) = 4.3e-23
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 1013 AEPAQGDEWVEQ-DETG 1028
+E +GDE +E+ DE G
Sbjct: 1337 SERQEGDEQIEEEDEEG 1353
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 295 (108.9 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 99/352 (28%), Positives = 158/352 (44%)
Query: 274 GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 333
G+ G+ GS + +F P +E V ++ H+A V + G+V + G+
Sbjct: 135 GVSLSGVLAHGSET-TQCVAFTP--IEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDNS 191
Query: 334 GGRLGHGVDSD--VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLL 391
GH +D+ + PKL++ALK + VA G H T ++ G YT G SN + G L
Sbjct: 192 SHCCGH-LDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCG-SNTH-GQL 248
Query: 392 GHGNEMSLWLPKKLNGPLEGIH-VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 450
GHG+ + +PK + L+ I V ++ GP + VT G +++FG G+ LGHG++
Sbjct: 249 GHGDTLDRPVPKVVEF-LKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQ 307
Query: 451 SVSTPREVDSLK--GLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXX 508
PR + + K G+ +R + G H A+ G+++TW
Sbjct: 308 DELQPRVIQAFKRKGIHILRVSAGDEHAVAL------------DSNGRVYTWGKGYCGAL 355
Query: 509 XXXXKEARLVPTCVAALVEPNFC---QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK- 564
+ ++ P LV N C QV T L G +Y G +G LG P
Sbjct: 356 GHGDENDKITPQ---VLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDR 412
Query: 565 -ANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 614
+ K L RV L + V +++ G YH V+T R ++ +G +LGH
Sbjct: 413 GVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGH 464
Score = 276 (102.2 bits), Expect = 8.6e-21, P = 8.6e-21
Identities = 82/284 (28%), Positives = 126/284 (44%)
Query: 294 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 353
F PK VE+ + +A G ++++G ++ G G+LGHG D PK+++
Sbjct: 205 FRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEF 264
Query: 354 LKNIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG-PLEG 411
LK I V +A G + AVT G +Y++G S NF LGHG + P+ + +G
Sbjct: 265 LKTIGPVVQIAAGPSYVLAVTQDGSVYSFG-SGSNF-CLGHGEQQDELQPRVIQAFKRKG 322
Query: 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 471
IH+ VS G H + S G+++T+G G G LGHGD TP+ + +L V+
Sbjct: 323 IHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCA 382
Query: 472 GVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPN-F 530
T +VE G F W +++ V ++P+
Sbjct: 383 RKRKTFVLVE--------GGLLYG--FGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRV 432
Query: 531 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRV 573
QVS G T+ +T G ++ G QLG G L PT +
Sbjct: 433 SQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
Score = 232 (86.7 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 80/276 (28%), Positives = 121/276 (43%)
Query: 362 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP-KKLNGPLEGIHVSSVSCG 420
+A G++HT + S +Y+ G S G+L HG+E + + + P V+ VS
Sbjct: 116 IATGKYHTLLINNS-KVYSCGVSLS--GVLAHGSETTQCVAFTPIEFPFPA-QVAQVSAT 171
Query: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAACGVWHTAAV 479
H+A V +GQ+ T GD + GH D + P+ V++LKG + A G+ T +
Sbjct: 172 QNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFL 231
Query: 480 VEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAAL--VEPNFCQVSCGH 537
G +T R VP V L + P Q++ G
Sbjct: 232 ------------SREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGP-VVQIAAGP 278
Query: 538 SLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE--EIACGDYHVAVL 595
S +A+T G VY+ GS LG + +L RV + + ++ GD H L
Sbjct: 279 SYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVAL 338
Query: 596 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKD 631
S VYTWGKG G LGHGD +D+ P ++ L +
Sbjct: 339 DSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNN 374
Score = 169 (64.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 44/117 (37%), Positives = 60/117 (51%)
Query: 519 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKL 577
P V AL QV+ G TV L+ GH YT GS +GQLG + +P VE
Sbjct: 207 PKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLK 266
Query: 578 TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQV 634
T V +IA G +V +T VY++G G+N LGHG+ D P +++A K K +
Sbjct: 267 TIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGI 323
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 301 (111.0 bits), Expect = 9.6e-23, P = 9.6e-23
Identities = 100/337 (29%), Positives = 155/337 (45%)
Query: 310 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 369
++CG H A+VT +++ +G G+LG G + + P I ALK V+L ACG +HT
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 370 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 429
T +G +Y GG+N LG ++ + P + I +S G +A +T
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI--KQLSAGANTSAALTE 157
Query: 430 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXX 489
G+LF +GD + G +G D+ +V P EV K + + +CG +H+A V
Sbjct: 158 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT--------- 206
Query: 490 XXXXXGKLFTWXXXXXXXXXXXXKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 547
G+L+T+ + P V + E QV+CG TV LT
Sbjct: 207 ---MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEKV 262
Query: 548 HVYTMGSPVYGQLGDPKA--NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 605
VY G +GQLG P +E ++ + I+CG+ H A++T +YT+G
Sbjct: 263 -VYAFGLGQFGQLGLGTFLFETSEPKIIE-RIKDQKICHISCGENHTALMTELGLLYTFG 320
Query: 606 KGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 640
G +G+LG G + N FP+L V+ I CG
Sbjct: 321 DGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 357
Score = 283 (104.7 bits), Expect = 8.4e-21, P = 8.4e-21
Identities = 88/289 (30%), Positives = 136/289 (47%)
Query: 362 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 421
++CG+ HT VT + +Y +G SN N+G LG G++ ++ P + L+ V +CG
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFG-SN-NWGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGR 96
Query: 422 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA-ACGVWHTAAVV 480
HT V T G ++ G G LG GD T ++ T++ + G +AA+
Sbjct: 97 NHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALT 156
Query: 481 EVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLT 540
E GKLF W K +P V V +SCG+ +
Sbjct: 157 E------------DGKLFMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHS 202
Query: 541 VALTTTGHVYTMGSPVYGQLGDPKA---NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+T G +YT G P G+LG P N + P RV G + + ++ +ACG H VLT
Sbjct: 203 AFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLG-IPERVIQ-VACGGGHTVVLTE 260
Query: 598 RTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTA 645
+ VY +G G G+LG G + + P ++E +KD+++ I CG + TA
Sbjct: 261 KV-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTA 308
Score = 253 (94.1 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 83/317 (26%), Positives = 146/317 (46%)
Query: 288 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGV--DSDV 345
G K P +++ V+ ACG H + T G V++ G G+LG G D D
Sbjct: 70 GSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDT 129
Query: 346 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 405
H +++ ++ ++ G + + A+T G ++ WG ++ G +G ++ ++ +P ++
Sbjct: 130 FH-QIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNS--EGQIGLEDKSNVCIPHEV 186
Query: 406 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKG 463
G +S +SCG +H+A VT G+L+TFG+ G LG + + ++ +P+ V +
Sbjct: 187 T---VGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE 243
Query: 464 LRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVA 523
R ++ ACG HT + E +V G+L E P +
Sbjct: 244 -RVIQVACGGGHTVVLTEKVV--YAFGLGQFGQL------GLGTFLFETSE----PKIIE 290
Query: 524 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKN 580
+ + C +SCG + T +T G +YT G +G+LG + N PT L +
Sbjct: 291 RIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFL-RF 349
Query: 581 FVEEIACGDYHVAVLTS 597
V+ IACG H+ V +
Sbjct: 350 AVQLIACGGCHMLVFAT 366
Score = 191 (72.3 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 59/179 (32%), Positives = 89/179 (49%)
Query: 271 TGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG 330
T DG L S G++ S V E V + I+CG H+A VT GE++++G
Sbjct: 156 TEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFG 215
Query: 331 EELGGRLGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF 388
E G+LG + ++H P+ + + ++ VACG HT +T +Y +G F
Sbjct: 216 EPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLT-EKVVYAFGLGQ--F 271
Query: 389 GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G LG G + K+ ++ + +SCG HTA++T G L+TFGDG G LG G
Sbjct: 272 GQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLG 330
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 268 (99.4 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 82/317 (25%), Positives = 139/317 (43%)
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GGG G+ + FV + +E + ++++ACG A +T +G + ++G G
Sbjct: 370 GGGTLLPGAVE-LPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGC 428
Query: 337 LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 396
LGHG +D+S P +++AL + VACG H A++ G+++ WG + G LG G
Sbjct: 429 LGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDG--GRLGLGTR 486
Query: 397 MSLWLPKKLNGPL-EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS-- 453
S P+++ P+ G V CG + ++TS G++ G F LG D +S+
Sbjct: 487 ESHNCPQQV--PMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGL-DCLSLEEE 543
Query: 454 -TP-REVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXX 511
P ++V+ + +A T V++ G +T+
Sbjct: 544 PVPHQQVEEALSFTPLGSAPLDRETLLCVDLGTAHSAAVTAS-GACYTFGSNQHGQLGTS 602
Query: 512 XKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT 571
+ P V L V+CG + TVA+ G VY+ G G+LG + LP
Sbjct: 603 SRRVSRAPCRVQGLEGIKMVMVACGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAGLPR 662
Query: 572 RVEGKLTKNF-VEEIAC 587
V+ T + V ++C
Sbjct: 663 PVQLDETHPYTVTSVSC 679
Score = 256 (95.2 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 88/313 (28%), Positives = 132/313 (42%)
Query: 354 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFG---LLGHGNEMSL--WLPKKLNGP 408
+ N V VA G VT SG + W G LL E+ ++ + L G
Sbjct: 335 MPNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLLPGAVELPQPQFVSRFLEGQ 394
Query: 409 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 468
G+ + V+CG TA +T G + TFG G+ G LGHG +S P V++L G V+
Sbjct: 395 -SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQ 453
Query: 469 AACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEP 528
ACG H A+ G+LF W +E+ P V +
Sbjct: 454 VACGASHVLAL------------SADGELFAWGRGDGGRLGLGTRESHNCPQQVPMVPGQ 501
Query: 529 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPT---RVEGKLTKNFV-- 582
+V CG ++ LT+ G V GS + +LG D + + P +VE L+ +
Sbjct: 502 EAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGS 561
Query: 583 -----EEIAC---GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQV 634
E + C G H A +T+ YT+G +G+LG P V+ L+ ++
Sbjct: 562 APLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKM 621
Query: 635 KSIVCGTSFTAAI 647
+ CG +FT AI
Sbjct: 622 VMVACGDAFTVAI 634
Score = 189 (71.6 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 54/176 (30%), Positives = 84/176 (47%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSW-GEELGGRLGHGVDSDVSHP------KLIDALKNIN 358
+V +A G A VT+ G + W LG G + V P + ++ +
Sbjct: 339 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLLPGAVELPQPQFVSRFLEGQSGVT 398
Query: 359 VELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 417
++ VACG+ T +T G + T+G GSN G LGHG+ + P + L G + V
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSN---GCLGHGSLTDISQPTIVEALL-GYEMVQV 454
Query: 418 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 473
+CG H +++ G+LF +G G G LG G R S + P++V + G R CG+
Sbjct: 455 ACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQRVVCGI 510
Score = 162 (62.1 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 40/102 (39%), Positives = 53/102 (51%)
Query: 527 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEI 585
E C V G + + A+T +G YT GS +GQLG + P RV+G V +
Sbjct: 567 ETLLC-VDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVM-V 624
Query: 586 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 627
ACGD + + EVY+WGKGA GRLG D +D P V+
Sbjct: 625 ACGDAFTVAIGAEGEVYSWGKGARGRLGRRD-EDAGLPRPVQ 665
Score = 162 (62.1 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 50/158 (31%), Positives = 75/158 (47%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG--KLP-----TR-VEGKLTKNFVE 583
QV+ G + +T +G + +P G G G +LP +R +EG+ ++
Sbjct: 342 QVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLLPGAVELPQPQFVSRFLEGQSGVT-IK 400
Query: 584 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 643
+ACGD A LT R + T+G G+NG LGHG D + P++VEAL ++ + CG S
Sbjct: 401 HVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASH 460
Query: 644 TAAIC----LHKWVSGVDQSMCSGCRIPFNFKRKRHNC 677
A+ L W G G R+ R+ HNC
Sbjct: 461 VLALSADGELFAWGRG------DGGRLGLG-TRESHNC 491
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 280 (103.6 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 70/204 (34%), Positives = 106/204 (51%)
Query: 279 GIHRSGSYAGVKM-DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
G G K+ D +P+ + + + +ACGG H +T G+VF+WG G+L
Sbjct: 21 GAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSGQL 80
Query: 338 GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM 397
GHG +++ PKL+ + + A G H+ V+ SG ++T G N +FG LGHG+ +
Sbjct: 81 GHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCG--NGSFGQLGHGDTL 138
Query: 398 SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRI-SVSTP 455
SL P K++ V V+CG H+ V+ + Q+ FG G G LG DRI SV+ P
Sbjct: 139 SLSTPAKVSH-FNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLP 197
Query: 456 REVDSLKGLRTVRAACGVWHTAAV 479
V LK + VR + H+AA+
Sbjct: 198 CVVSGLKDVEVVRISANGDHSAAI 221
Score = 253 (94.1 bits), Expect = 9.5e-19, P = 9.5e-19
Identities = 71/251 (28%), Positives = 119/251 (47%)
Query: 322 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 381
++ +V+SWG G+LG D P+L+ ++ ++ACG H A+T G ++TW
Sbjct: 13 EEEQVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTW 72
Query: 382 G-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 440
G GS+ G LGHG+ +++ LPK ++ + + ++ + G H+ V+ +G +FT G+G+
Sbjct: 73 GRGSS---GQLGHGDILNITLPKLVSFFDDSV-ITQAAAGWSHSGFVSDSGCIFTCGNGS 128
Query: 441 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTW 500
FG LGHGD +S+STP +V ACG+ H+ V+ GK
Sbjct: 129 FGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSL----VLFAGNQVCGFGSGK---- 180
Query: 501 XXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 560
K L P V+ L + ++S + A++ G ++ G G
Sbjct: 181 -RGQLGFSSDRIKSVNL-PCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCGG- 237
Query: 561 GDPKANGKLPT 571
D A LP+
Sbjct: 238 PDVHAPQSLPS 248
Score = 220 (82.5 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 83/275 (30%), Positives = 125/275 (45%)
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 444
N +FG LGHG+ +SL P K++ V V+CG H+ V+ + Q+ FG G G L
Sbjct: 126 NGSFGQLGHGDTLSLSTPAKVSH-FNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQL 184
Query: 445 GHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMV-GXXXXXXXXXGKLFTWXX 502
G DRI V S GL+ V VV + G G+ F+W
Sbjct: 185 GFSSDRIKSVNLPCVVS--GLKDVE----------VVRISANGDHSAAISADGQFFSWGR 232
Query: 503 XXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD 562
++ +P+ ++ F +V+ G + + LT G V+ +GS + Q
Sbjct: 233 GFCGGPDVHAPQS--LPSPLS------FREVAVGWNHALLLTVDGEVFKLGSTLNKQ--- 281
Query: 563 PKANGKLPTRVEGKLTK--NF----VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 616
P+ E K +F V +IA G H A +T EV TWG G +G+LG G+
Sbjct: 282 PEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGN 341
Query: 617 TDDRNFPSLVEA----LKDKQVKSIVCGTSFTAAI 647
T+D+ P LV L+ K++K + CG+ FT A+
Sbjct: 342 TNDQTSPELVSLGSIDLRTKEIK-VYCGSGFTYAV 375
Score = 162 (62.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 42/161 (26%), Positives = 72/161 (44%)
Query: 496 KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
++++W + L+P ++ P+ ++CG + +ALT+ G V+T G
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRG 75
Query: 556 VYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 614
GQLG N LP V + + + A G H ++ ++T G G+ G+LGH
Sbjct: 76 SSGQLGHGDILNITLPKLVSF-FDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGH 134
Query: 615 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSG 655
GDT + P+ V + VK + CG + + V G
Sbjct: 135 GDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCG 175
Score = 154 (59.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 60/216 (27%), Positives = 104/216 (48%)
Query: 272 GDGILGGGIHRSGS--YAGVKMDSF-VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFS 328
G+ + G G + G ++ ++ S +P V ++V I+ G H+A ++ G+ FS
Sbjct: 170 GNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFS 229
Query: 329 WGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS-NCN 387
WG G G DV P+ + + ++ VA G +H +T+ G+++ G + N
Sbjct: 230 WGRGFCG--G----PDVHAPQSLPS--PLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQ 281
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
+ S L +K+ +G+ V ++ G H+A VT G++ T+G G G LG G
Sbjct: 282 PEKQQLQIDSSEALFEKVPD-FDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLG 340
Query: 448 DRISVSTPREVDSLKG--LRT--VRAACGVWHTAAV 479
+ ++P E+ SL LRT ++ CG T AV
Sbjct: 341 NTNDQTSP-ELVSLGSIDLRTKEIKVYCGSGFTYAV 375
Score = 122 (48.0 bits), Expect = 0.00047, P = 0.00047
Identities = 41/148 (27%), Positives = 66/148 (44%)
Query: 292 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG---VDSDVSHP 348
D P+++ S L + +A G HA L+T GEVF G L + +DS +
Sbjct: 239 DVHAPQSLPSP--LSFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALF 296
Query: 349 KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-G 407
+ + + V +A G H+ AVT +G++ TWG G LG GN P+ ++ G
Sbjct: 297 EKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGE--HGQLGLGNTNDQTSPELVSLG 354
Query: 408 PLEGIHVSSVS--CGPWHTAVVTSAGQL 433
++ + + CG T V +L
Sbjct: 355 SID-LRTKEIKVYCGSGFTYAVKRKQEL 381
Score = 37 (18.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 1031 ITLVALPGGLKDLKRVRFS 1049
+ L + GLKD++ VR S
Sbjct: 194 VNLPCVVSGLKDVEVVRIS 212
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 282 (104.3 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 91/356 (25%), Positives = 152/356 (42%)
Query: 271 TGDGILGGGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSW 329
T I+ G G G + VE+ V+++ G R++ + G +F+W
Sbjct: 3 TATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTW 62
Query: 330 GEELGGRLGHGVDSDVSH-PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF 388
G G LGH ++ + P + AL N+ + A G H AV G Y WGG+ +
Sbjct: 63 GWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNE--Y 120
Query: 389 GLLGHG---NEMSLWLPKKLNGPLE---GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 442
G G +EM + + + P + V V+ G H+ V+T G ++T+G
Sbjct: 121 GQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPW-- 178
Query: 443 VLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXX 502
GD +S P V L+ +R + A G +H A+ E G+L W
Sbjct: 179 --PPGDIKQISVPVRVQGLENVRLI--AVGAFHNLALEE------------DGRLLAWGN 222
Query: 503 XXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG- 561
+ P V L + ++ G + ALT G VY G +G+LG
Sbjct: 223 NEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGL 282
Query: 562 --DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 615
+ K++ +P +V L + + +++CG H LT ++++G+G +GRLG+G
Sbjct: 283 GDNDKSSKMVPQKVN-LLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Score = 281 (104.0 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 88/328 (26%), Positives = 140/328 (42%)
Query: 326 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 385
+ +WG G+LG G + + +++AL+ +V V G ++ A+ G M+TWG +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66
Query: 386 CNFGLLGHGNEMSLW-LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 444
G LGH E +P ++ L + ++ + G WH V G+ + +G +G
Sbjct: 67 R--GTLGHQPETKTENIPSRVKA-LANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 123
Query: 445 GHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXX 503
G + + P D + + C T V G G ++TW
Sbjct: 124 GEEPLKDEMGRPVRRDIV-----IPKRCAPKLTVRQVAAG-GTHSVVLTREGHVWTWGQP 177
Query: 504 XXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-- 561
K+ VP V L V H+L AL G + G+ YGQLG
Sbjct: 178 WPPGDI---KQIS-VPVRVQGLENVRLIAVGAFHNL--ALEEDGRLLAWGNNEYGQLGTG 231
Query: 562 DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD--D 619
D + P V+G L + +IA G +H LT + EVY WG+G +GRLG GD D
Sbjct: 232 DTQPTSH-PVPVQG-LDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSS 289
Query: 620 RNFPSLVEALKDKQVKSIVCGTSFTAAI 647
+ P V L ++ + + CG + + A+
Sbjct: 290 KMVPQKVNLLAEEDIIQVSCGGTHSVAL 317
Score = 249 (92.7 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 92/327 (28%), Positives = 140/327 (42%)
Query: 295 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG---------EELGGRLGHGVDSDV 345
+P V++ + + A GG H V QG ++WG E L +G V D+
Sbjct: 81 IPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDI 140
Query: 346 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 405
PK A K + V VA G H+ +T G ++TWG G+ + +P ++
Sbjct: 141 VIPKRC-APK-LTVRQVAAGGTHSVVLTREGHVWTWGQP------WPPGDIKQISVPVRV 192
Query: 406 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR 465
G LE + + +V G +H + G+L +G+ +G LG GD S P V L L
Sbjct: 193 QG-LENVRLIAV--GAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLT 249
Query: 466 TVRAACGVWHTAAVVEVMVGXXXX-XXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAA 524
V A G WH+ A+ + G G+L K +++VP V
Sbjct: 250 LVDIAAGGWHSTALTDK--GEVYGWGRGEHGRL---------GLGDNDKSSKMVPQKVNL 298
Query: 525 LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK--ANGK---LPTRV---EGK 576
L E + QVSCG + +VALT G +++ G +G+LG + G+ LP ++ EG
Sbjct: 299 LAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGS 358
Query: 577 LTKNFVEE--------IACGDYHVAVL 595
EE IACG H +
Sbjct: 359 FNHTDEEEEGKWSAKSIACGGRHTLAI 385
Score = 232 (86.7 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 63/204 (30%), Positives = 104/204 (50%)
Query: 295 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 354
VP V+ + +V+ IA G H + + G + +WG G+LG G SHP + L
Sbjct: 188 VPVRVQG--LENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGL 245
Query: 355 KNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 413
++ + +A G H+ A+T G++Y WG G + GL G ++ S +P+K+N E
Sbjct: 246 DDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGL-GDNDKSSKMVPQKVNLLAEE-D 303
Query: 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV--------------- 458
+ VSCG H+ +T G++F+FG G G LG+G +++ P E+
Sbjct: 304 IIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTD 363
Query: 459 DSLKGLRTVRA-ACGVWHTAAVVE 481
+ +G + ++ ACG HT A+VE
Sbjct: 364 EEEEGKWSAKSIACGGRHTLAIVE 387
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 291 (107.5 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 87/297 (29%), Positives = 129/297 (43%)
Query: 314 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH-HTCAV 372
G T E+F G G LG G P+ +D+L + ++ G H
Sbjct: 55 GNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLA 114
Query: 373 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 432
T G+++TWG N + LG+G +P ++ L V V+CG +H+ V+TS G+
Sbjct: 115 TTEGEVFTWG-HNA-YSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 433 LFTFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGXXXXXX 491
+F +G G +G G ++ PR V L+ V ACG AVV+
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT--------- 223
Query: 492 XXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 551
G+++ W + P VAAL +V+CG++ T+ LT G VY
Sbjct: 224 ---GEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYA 280
Query: 552 MGSPVYGQLGDP-KANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGK 606
G+ YGQLG K+N PT V + + +E AC H A T VY WG+
Sbjct: 281 WGANSYGQLGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 285 (105.4 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 77/265 (29%), Positives = 127/265 (47%)
Query: 296 PKAVESAVVLDVQNIAC----GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI 351
P+ ++S L+ + IAC G H L T +GEVF+WG +LG+G + P I
Sbjct: 89 PRRLDS---LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHI 145
Query: 352 DA-LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 410
L N V VACG +H+ +T G+++ WG +N G +G G+ ++ +P+++ G L+
Sbjct: 146 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS--GQVGSGSTVNQPIPRRVTGCLQ 203
Query: 411 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 470
V +++CG V G+++ +G G LG G+ + TP V +L+G+R R A
Sbjct: 204 NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVA 263
Query: 471 CGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNF 530
CG HT + + G+++ W K + PT V + +
Sbjct: 264 CGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPVT-VEKDRI 310
Query: 531 CQVSCGHSL--TVALTTTGHVYTMG 553
+++ HS + A T GHVY G
Sbjct: 311 IEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 273 (101.2 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 75/278 (26%), Positives = 129/278 (46%)
Query: 373 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW-HTAVVTSAG 431
T++ +++ G +NC G LG G+ S P++L+ L G ++ +S G H + T+ G
Sbjct: 62 TVNDEIFVLG-TNC-CGCLGLGDVQSTIEPRRLDS-LNGKKIACLSYGSGPHIVLATTEG 118
Query: 432 QLFTFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGXXXXX 490
++FT+G + LG+G P + + L + + ACG +H+ +
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS--------- 169
Query: 491 XXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFC-QVSCGHSLTVALTTTGHV 549
G++F W + +P V ++ ++CG +A+ TG V
Sbjct: 170 ---DGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEV 226
Query: 550 YTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 608
Y G GQLG N P RV L V+ +ACG H VLT +VY WG +
Sbjct: 227 YVWGYNGNGQLGLGNSGNQPTPCRVAA-LQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
G+LG G+ ++++P+ V KD+ ++ C ++ T+A
Sbjct: 286 YGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 323
Score = 233 (87.1 bits), Expect = 7.1e-16, P = 7.1e-16
Identities = 65/218 (29%), Positives = 95/218 (43%)
Query: 432 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXX 491
++F G G LG GD S PR +DSL G + AC + + G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGS--------GPHIVLA 114
Query: 492 XXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAA-LVEPNFCQVSCGHSLTVALTTTGHVY 550
G++FTW LVP ++ L +V+CG ++ LT+ G V+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 551 TMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 609
G GQ+G N +P RV G L V IACG + EVY WG N
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 234
Query: 610 GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
G+LG G++ ++ P V AL+ +V+ + CG + T +
Sbjct: 235 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Score = 203 (76.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 57/182 (31%), Positives = 86/182 (47%)
Query: 271 TGDG-ILGGGIHRSGSY-AGVKMDSFVPKAVESAVVLDVQ-NIACGGRHAALVTKQGEVF 327
T DG + G + SG +G ++ +P+ V + V IACG V GEV+
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVY 227
Query: 328 SWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN 387
WG G+LG G + P + AL+ I V+ VACG HT +T G +Y WG ++
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS-- 285
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGD--GTFGVL 444
+G LG GN+ + P + + I + +C HT A T G ++ +G G +L
Sbjct: 286 YGQLGTGNKSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 344
Query: 445 GH 446
H
Sbjct: 345 PH 346
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 309 (113.8 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 66/172 (38%), Positives = 99/172 (57%)
Query: 310 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHH 368
I CG H+ ++K GE+F+WG+ L G+LG G + P++++ L + + ++ GE H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202
Query: 369 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 428
+ A+++SG++Y+WG + C G LG G+ S P + G L+ V V+CG H+A++T
Sbjct: 203 SMALSMSGNIYSWGKNEC--GQLGLGHTESKDDPSLIEG-LDNQKVEFVACGGSHSALLT 259
Query: 429 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
G LFTFG G G LGH + P V L G R + ACG WHT A V
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYV 311
Score = 253 (94.1 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 60/174 (34%), Positives = 93/174 (53%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
P+ VE + + I+ G H+ ++ G ++SWG+ G+LG G P LI+ L
Sbjct: 182 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLD 241
Query: 356 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 415
N VE VACG H+ +T G ++T+G G LGH + + P L L G V+
Sbjct: 242 NQKVEFVACGGSHSALLTQDGLLFTFGAGK--HGQLGHNSTQNELRPC-LVAELVGYRVT 298
Query: 416 SVSCGPWHT-AVVTSAGQLFTFGDGTFGVLGHG---DRISVSTPREVDSLKGLR 465
++CG WHT A V+ G++F+FG G G LG+G D++ + P +V S + L+
Sbjct: 299 QIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQL-MPLPVKVSSSEELK 351
Score = 235 (87.8 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 59/224 (26%), Positives = 110/224 (49%)
Query: 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAACG 472
+ ++CG +H+ ++ G+LF +G G LG G + S +TP+ V+ L G+ + + G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199
Query: 473 VWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQ 532
H+ A+ G +++W E++ P+ + L
Sbjct: 200 EAHSMAL------------SMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEF 247
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH- 591
V+CG S + LT G ++T G+ +GQLG +L + +L V +IACG +H
Sbjct: 248 VACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHT 307
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 635
+A ++ +V+++G G +G+LG+G T D+ P V+ +++K
Sbjct: 308 LAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351
Score = 198 (74.8 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 60/201 (29%), Positives = 91/201 (45%)
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
D S+ R L+ + ++ CG +H+ A+ + G+LF W
Sbjct: 122 DNYSMKHLRFESILQEKKIIQITCGDYHSLALSK------------GGELFAWGQNLHGQ 169
Query: 508 XXXXXK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN 566
K + P V L Q+S G + ++AL+ +G++Y+ G GQLG
Sbjct: 170 LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTE 229
Query: 567 GKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSL 625
K P+ +EG L VE +ACG H A+LT ++T+G G +G+LGH T + P L
Sbjct: 230 SKDDPSLIEG-LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCL 288
Query: 626 VEALKDKQVKSIVCGTSFTAA 646
V L +V I CG T A
Sbjct: 289 VAELVGYRVTQIACGRWHTLA 309
Score = 183 (69.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 38/127 (29%), Positives = 71/127 (55%)
Query: 525 LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF--- 581
L E Q++CG ++AL+ G ++ G ++GQLG K P+ ++ ++
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLAGV 191
Query: 582 -VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 640
+ +I+ G+ H L+ +Y+WGK G+LG G T+ ++ PSL+E L +++V+ + CG
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACG 251
Query: 641 TSFTAAI 647
S +A +
Sbjct: 252 GSHSALL 258
Score = 166 (63.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 43/205 (20%), Positives = 92/205 (44%)
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
G G+ AG + PK ++ + + ++ G H +++ G+ F +
Sbjct: 70 GAGVQVHQLLAG-SGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYD------ 122
Query: 337 LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 396
+ + H + L+ + + CG++H+ A++ G+++ WG N + G LG G +
Sbjct: 123 -----NYSMKHLRFESILQEKKIIQITCGDYHSLALSKGGELFAWG-QNLH-GQLGVGRK 175
Query: 397 MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPR 456
++ L G+ ++ +S G H+ ++ +G ++++G G LG G S P
Sbjct: 176 FPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPS 235
Query: 457 EVDSLKGLRTVRAACGVWHTAAVVE 481
++ L + ACG H+A + +
Sbjct: 236 LIEGLDNQKVEFVACGGSHSALLTQ 260
Score = 37 (18.1 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 122 ISRSHYRKGRAESRSDEVSSVATSP 146
+ R RK R RS + AT P
Sbjct: 1 MERRSRRKSRRNGRSTAGKAAATQP 25
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 288 (106.4 bits), Expect = 6.4e-22, P = 6.4e-22
Identities = 80/286 (27%), Positives = 133/286 (46%)
Query: 273 DGILGGGIHRSGSYAGVKMDSFV-PKAVESAVVLDVQNIACG-GRHAALVTKQGEVFSWG 330
D I G + SG + S + P+ ++S + +++ G G H L T GEVF+WG
Sbjct: 65 DEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWG 124
Query: 331 EELGGRLGHGVDSDVSHPKLIDA-LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFG 389
+LG+G + P I L N V VACG +H+ +T G+++ WG +N G
Sbjct: 125 HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS--G 182
Query: 390 LLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 449
+G G+ + +P+++ G L+ V +++CG + V G+++ +G G LG G
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSS 242
Query: 450 ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXX 509
+ TP V +L+G+R R ACG HT + + G+++ W
Sbjct: 243 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQIYAWGANSYGQLG 290
Query: 510 XXXKEARLVPTCVAALVEPNFCQVSCGHSL--TVALTTTGHVYTMG 553
K + PT V + + +++ HS + A T GHVY G
Sbjct: 291 TGNKSNQSYPTPVV-VEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 287 (106.1 bits), Expect = 8.2e-22, P = 8.2e-22
Identities = 85/297 (28%), Positives = 129/297 (43%)
Query: 314 GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH-HTCAV 372
G T E+F G G LG G P+ +D+L + ++ G H
Sbjct: 55 GNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLA 114
Query: 373 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQ 432
T G+++TWG N + LG+G +P ++ L V V+CG +H+ V+TS G+
Sbjct: 115 TTDGEVFTWG-HNA-YSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 433 LFTFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGXXXXXX 491
+F +G G +G G + PR V L+ + ACG + AVV+
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDT--------- 223
Query: 492 XXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 551
G+++ W + P VAAL +V+CG++ T+ LT G +Y
Sbjct: 224 ---GEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYA 280
Query: 552 MGSPVYGQLGDP-KANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGK 606
G+ YGQLG K+N PT V + + +E AC H A T VY WG+
Sbjct: 281 WGANSYGQLGTGNKSNQSYPTPVVVEKDR-IIEIAACHSAHTSAAKTQGGHVYMWGQ 336
Score = 281 (104.0 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 75/278 (26%), Positives = 132/278 (47%)
Query: 373 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW-HTAVVTSAG 431
T++ +++ G +NC+ G LG G+ S P++L+ L G ++S+S G H + T+ G
Sbjct: 62 TVNDEIFVLG-TNCS-GCLGVGDIQSTIEPRRLDS-LTGKKIASLSYGSGPHIVLATTDG 118
Query: 432 QLFTFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGXXXXX 490
++FT+G + LG+G P + + L + + ACG +H+ +
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS--------- 169
Query: 491 XXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQ-VSCGHSLTVALTTTGHV 549
G++F W + +P V ++ ++CG ++A+ TG V
Sbjct: 170 ---DGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEV 226
Query: 550 YTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 608
Y G GQLG N P RV L V+ +ACG H VLT ++Y WG +
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAA-LQGIRVQRVACGYAHTLVLTDEGQIYAWGANS 285
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
G+LG G+ ++++P+ V KD+ ++ C ++ T+A
Sbjct: 286 YGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 323
Score = 235 (87.8 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 65/218 (29%), Positives = 93/218 (42%)
Query: 432 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXX 491
++F G G LG GD S PR +DSL G + + G G
Sbjct: 66 EIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGS-----------GPHIVLA 114
Query: 492 XXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAA-LVEPNFCQVSCGHSLTVALTTTGHVY 550
G++FTW LVP ++ L +V+CG ++ LT+ G V+
Sbjct: 115 TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 551 TMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 609
G GQ+G AN +P RV G L V IACG + EVY WG N
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGN 234
Query: 610 GRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
G+LG G + ++ P V AL+ +V+ + CG + T +
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Score = 207 (77.9 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 58/182 (31%), Positives = 87/182 (47%)
Query: 271 TGDG-ILGGGIHRSGSY-AGVKMDSFVPKAVESAVVLDV-QNIACGGRHAALVTKQGEVF 327
T DG + G + SG +G + +P+ V + V NIACG + V GEV+
Sbjct: 168 TSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVY 227
Query: 328 SWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN 387
WG G+LG G + P + AL+ I V+ VACG HT +T G +Y WG ++
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANS-- 285
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGD--GTFGVL 444
+G LG GN+ + P + + I + +C HT A T G ++ +G G +L
Sbjct: 286 YGQLGTGNKSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 344
Query: 445 GH 446
H
Sbjct: 345 PH 346
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 290 (107.1 bits), Expect = 7.2e-22, P = 7.2e-22
Identities = 104/351 (29%), Positives = 155/351 (44%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSW-GEELGGRLGHGVD--SDVSHPKLI----DALKNIN 358
+V ++ G A VTK G + W +G G + ++ P+ + + +
Sbjct: 339 EVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQPQFVSRFLEGQSGVT 398
Query: 359 VELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV 417
++ V+CG+ T +T G + T+G GSN G LGHGN + PK + L G + V
Sbjct: 399 IKHVSCGDLFTACLTDRGIIMTFGSGSN---GCLGHGNFTDVSQPKIVEALL-GYEMVQV 454
Query: 418 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTA 477
+CG H V++ ++F +G G G LG G ++P++V R CG+ ++
Sbjct: 455 ACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGI-DSS 513
Query: 478 AVVEVMVGXXXXXXXXXGKL-FTWXXXXXXXXXXXXKEARLVPTCV--AAL-VEPNFC-Q 532
V+ V KL E V TC A L EP C
Sbjct: 514 MVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCAD 573
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYH 591
+ HS A+T +G YT GS +GQLG N ++P V G L V +ACGD
Sbjct: 574 IGTAHS--AAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVG-LRAMKVTVVACGDAF 630
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ---VKSIVC 639
+ + EV TWGKGA GRLG D ++ P V+ L++ V S+ C
Sbjct: 631 TVAIGADGEVCTWGKGARGRLGRKD-EETGMPRPVQ-LEETHPYVVTSVAC 679
Score = 262 (97.3 bits), Expect = 8.0e-19, P = 8.0e-19
Identities = 91/324 (28%), Positives = 136/324 (41%)
Query: 343 SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG----GSNCNFGLLGHGNEMS 398
S ++ P + L N V V+ G VT SG + W G+ L G ++
Sbjct: 325 SGITTPLRLPML-NTEVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQ 383
Query: 399 -LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPRE 457
++ + L G G+ + VSCG TA +T G + TFG G+ G LGHG+ VS P+
Sbjct: 384 PQFVSRFLEGQ-SGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKI 442
Query: 458 VDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARL 517
V++L G V+ ACG H AV ++F W E
Sbjct: 443 VEALLGYEMVQVACGASHVLAV------------SNEREVFAWGRGDNGRLGLGTLECHN 490
Query: 518 VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPT---RV 573
P VA E +V CG ++ LT + GS +LG D ++ + P+ +V
Sbjct: 491 SPQQVAVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQV 550
Query: 574 EGKLTKNFV-------EEIACGDY---HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 623
E E + C D H A +T+ + YT+G +G+LG + P
Sbjct: 551 EEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVP 610
Query: 624 SLVEALKDKQVKSIVCGTSFTAAI 647
LV L+ +V + CG +FT AI
Sbjct: 611 HLVVGLRAMKVTVVACGDAFTVAI 634
Score = 254 (94.5 bits), Expect = 5.9e-18, P = 5.9e-18
Identities = 83/299 (27%), Positives = 127/299 (42%)
Query: 294 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 353
FV + +E + +++++CG A +T +G + ++G G LGHG +DVS PK+++A
Sbjct: 386 FVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEA 445
Query: 354 LKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 412
L + VACG H AV+ +++ WG G N G LG G P+++ P E
Sbjct: 446 LLGYEMVQVACGASHVLAVSNEREVFAWGRGDN---GRLGLGTLECHNSPQQVAVPPEH- 501
Query: 413 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSLKGLRTVRAAC 471
V CG + V+T Q+ G LG DRIS P D ++ A
Sbjct: 502 EAQRVICGIDSSMVLTVNNQILACGSNRCNKLGL-DRISSAEEPSPEDQVEEATVFTCAQ 560
Query: 472 GV-WHTAAVVEVMVGXXXXXX-XXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPN 529
+ VV +G G+ +T+ VP V L
Sbjct: 561 SAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMK 620
Query: 530 FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFV-EEIAC 587
V+CG + TVA+ G V T G G+LG +P V+ + T +V +AC
Sbjct: 621 VTVVACGDAFTVAIGADGEVCTWGKGARGRLGRKDEETGMPRPVQLEETHPYVVTSVAC 679
Score = 182 (69.1 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 41/131 (31%), Positives = 63/131 (48%)
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYH 591
VSCG T LT G + T GS G LG + P VE L V+ +ACG H
Sbjct: 402 VSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQ-VACGASH 460
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHK 651
V +++ EV+ WG+G NGRLG G + N P V + + + ++CG + + ++
Sbjct: 461 VLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMVLTVNN 520
Query: 652 WVSGVDQSMCS 662
+ + C+
Sbjct: 521 QILACGSNRCN 531
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 305 (112.4 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 98/338 (28%), Positives = 157/338 (46%)
Query: 309 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 368
+++CG H+A+VT +++ +G G+LG G S +S P + ALK V+L ACG +H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH 98
Query: 369 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 428
T T G++Y GG+N G LG G+ ++ + +S G +A +T
Sbjct: 99 TLVSTEGGNVYATGGNN--EGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156
Query: 429 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
G+LF +GD + G +G + +V P++V K + + +CG +H+A V
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-------- 206
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
G+L+ + + P V+ + E QV+CG TV LT
Sbjct: 207 ----TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLTEN 261
Query: 547 GHVYTMGSPVYGQLGDPKA--NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 604
VYT G +GQLG P +E + + I+CG+ H A++T +YT+
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIEN-IRDQTISYISCGENHTALITDIGLMYTF 319
Query: 605 GKGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCG 640
G G +G+LG G + N P+L VK + CG
Sbjct: 320 GDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACG 357
Score = 265 (98.3 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 86/298 (28%), Positives = 137/298 (45%)
Query: 355 KN-INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 413
KN + V L +CG+ H+ VT + +Y +G SN N+G LG G++ ++ P + L+
Sbjct: 33 KNDVPVHL-SCGDEHSAVVTGNNKLYMFG-SN-NWGQLGLGSKSAISKPTCVKA-LKPEK 88
Query: 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 473
V +CG HT V T G ++ G G LG GD +T + ++
Sbjct: 89 VKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAG 148
Query: 474 WHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQV 533
+T+A + G+LF W VP V + +P +
Sbjct: 149 SNTSAAL-----------TEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVT-IGKP-VSWI 195
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDY 590
SCG+ + +TT G +Y G P G+LG P N + P V ++ + ++ +ACG
Sbjct: 196 SCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVS-EIPEKVIQ-VACGGE 253
Query: 591 HVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
H VLT VYT+G G G+LG G + + P ++E ++D+ + I CG + TA I
Sbjct: 254 HTVVLTENA-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALI 310
Score = 235 (87.8 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 79/308 (25%), Positives = 144/308 (46%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
P V++ V+ ACG H + T+ G V++ G G+LG G + + +I
Sbjct: 78 PTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFT 137
Query: 356 NIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV 414
+ + ++ ++ G + + A+T G ++ WG ++ G +G N ++ +P+++ G V
Sbjct: 138 SEHKIKQLSAGSNTSAALTEDGRLFMWGDNS--EGQIGLKNVSNVCVPQQVT---IGKPV 192
Query: 415 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACG 472
S +SCG +H+A VT+ G+L+ FG+ G LG +++ + TP+ V + + ++ ACG
Sbjct: 193 SWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACG 251
Query: 473 VWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQ 532
HT + E V G+L E P + + +
Sbjct: 252 GEHTVVLTENAV--YTFGLGQFGQL------GLGTFLFETSE----PKVIENIRDQTISY 299
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNFVEEIACGD 589
+SCG + T +T G +YT G +G+LG + N +PT L + V+ +ACG
Sbjct: 300 ISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFL-RFIVKLVACGG 358
Query: 590 YHVAVLTS 597
H+ V +
Sbjct: 359 CHMVVFAA 366
Score = 204 (76.9 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 61/179 (34%), Positives = 89/179 (49%)
Query: 271 TGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG 330
T DG L S G+K S V + + V I+CG H+A VT GE++ +G
Sbjct: 156 TEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFG 215
Query: 331 EELGGRLGHGVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNF 388
E G+LG +H P+L+ + ++ VACG HT +T + +YT+G F
Sbjct: 216 EPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGEHTVVLTENA-VYTFGLGQ--F 271
Query: 389 GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G LG G + K+ + +S +SCG HTA++T G ++TFGDG G LG G
Sbjct: 272 GQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 38 (18.4 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 1032 TLVALPGGLKDLKRVRFSRKKFS 1054
T +A G+KDL+ S KK S
Sbjct: 647 TKLAEIAGMKDLREREKSTKKMS 669
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 304 (112.1 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 99/341 (29%), Positives = 155/341 (45%)
Query: 310 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 369
++CG H A+VT +++ +G G+LG G S VS P + ALK V+ ACG +HT
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 370 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 429
T G +Y GG+N G LG G+ ++ + +S G +A +T
Sbjct: 100 LVSTEGGKVYAAGGNN--EGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTE 157
Query: 430 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXX 489
G+LF +GD + G +G + +V P++V K + + +CG +H+A V
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI--SCGYYHSAFVT--------- 206
Query: 490 XXXXXGKLFTWXXXXXXXXXXXXKEA--RLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 547
G+L+T+ + +P V + QV+CG TV LT
Sbjct: 207 ---TEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPG-IPGKVVQVACGGGHTVVLTEKA 262
Query: 548 HVYTMGSPVYGQLGDPKA--NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 605
VYT G +GQLG +P +E + + IACG+ H A++T +YT+G
Sbjct: 263 -VYTFGLGQFGQLGLGTFLFETSVPKAIE-HIKDQKISFIACGENHTALITDMGLMYTFG 320
Query: 606 KGANGRLGHGDTDDRN--FPSLVEALKDKQVKSIVCGTSFT 644
G +G+LG G + N P+L V+ + CG T
Sbjct: 321 DGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHT 361
Score = 296 (109.3 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 90/290 (31%), Positives = 135/290 (46%)
Query: 362 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 421
++CG+ HT VT + +Y +G SN N+G LG G++ ++ P + L+ V +CG
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFG-SN-NWGQLGLGSKSTVSKPTCVKA-LKPEKVKFAACGR 96
Query: 422 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
HT V T G+++ G G LG GD ST + R ++ +T+A +
Sbjct: 97 NHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAAL- 155
Query: 482 VMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTV 541
G+LF W VP V V +SCG+ +
Sbjct: 156 ----------TEDGELFMWGDNSEGQIGLENVTNVCVPQQVT--VGKPISWISCGYYHSA 203
Query: 542 ALTTTGHVYTMGSPVYGQLGDPK---ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 598
+TT G +YT G P G+LG P N ++P V G K V ++ACG H VLT +
Sbjct: 204 FVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK--VVQVACGGGHTVVLTEK 261
Query: 599 TEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
VYT+G G G+LG G + + P +E +KD+++ I CG + TA I
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310
Score = 266 (98.7 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 84/316 (26%), Positives = 148/316 (46%)
Query: 288 GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH 347
G K P V++ V+ ACG H + T+ G+V++ G G+LG G + S
Sbjct: 70 GSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129
Query: 348 PKLIDALKNIN-VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN 406
LI + ++ ++ G + + A+T G+++ WG ++ G +G N ++ +P+++
Sbjct: 130 FHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNS--EGQIGLENVTNVCVPQQVT 187
Query: 407 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--TPREVDSLKGL 464
G +S +SCG +H+A VT+ GQL+TFG+ G LG +++ V+ P+ V + G
Sbjct: 188 ---VGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG- 243
Query: 465 RTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAA 524
+ V+ ACG HT + E V L T+ VP +
Sbjct: 244 KVVQVACGGGHTVVLTEKAVYTFGLGQFGQLGLGTFLFETS------------VPKAIEH 291
Query: 525 LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLTKNF 581
+ + ++CG + T +T G +YT G +G+LG + N +PT L +
Sbjct: 292 IKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFL-RFI 350
Query: 582 VEEIACGDYHVAVLTS 597
V+ ++CG H V +
Sbjct: 351 VQLVSCGGCHTLVFAT 366
Score = 207 (77.9 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 65/198 (32%), Positives = 103/198 (52%)
Query: 295 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLID 352
VP+ V V + I+CG H+A VT +G+++++GE G+LG V+H P+ +
Sbjct: 182 VPQQV--TVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVP 239
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKKLNGPLEG 411
+ V+ VACG HT +T +YT+G FG LG G + +PK + ++
Sbjct: 240 GIPGKVVQ-VACGGGHTVVLTEKA-VYTFGLGQ--FGQLGLGTFLFETSVPKAIEH-IKD 294
Query: 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG--LRTV-- 467
+S ++CG HTA++T G ++TFGDG G LG G + ST + + +L LR +
Sbjct: 295 QKISFIACGENHTALITDMGLMYTFGDGRHGKLGLG--LENSTNQFIPTLCSNFLRFIVQ 352
Query: 468 RAACGVWHTAAVVEVMVG 485
+CG HT +G
Sbjct: 353 LVSCGGCHTLVFATPRLG 370
Score = 37 (18.1 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 9/39 (23%), Positives = 23/39 (58%)
Query: 883 SQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSL 921
S + + + + T +LK+ A G + +K A++++ K++
Sbjct: 520 SPIDKQKKQETIEKLKQHTAHFGNDDSKGCASEEMSKTV 558
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 214 (80.4 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 63/183 (34%), Positives = 94/183 (51%)
Query: 272 GDGILGG-GIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG 330
GDG LG G+ S S G+ MD++ P V S + D+ +I+ G H+ VT GE+++WG
Sbjct: 50 GDGNLGALGLS-SSSIPGMGMDAYEPTVV-SNLPSDISSISAGHYHSLAVTSSGEIWAWG 107
Query: 331 EELGGRLGHGV-DSDV---SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
G+LG V DS S PK ++ L+N+NV+ + A+ G ++ WG S
Sbjct: 108 RNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSLWVWGRSKR 167
Query: 387 NFGLLGHGNEM-SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFG 442
G LG GN + +P ++ L HV VS G H +T G++F +G DG G
Sbjct: 168 --GQLGLGNGIIEARVPSRVEN-LAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVG 224
Query: 443 VLG 445
+G
Sbjct: 225 NVG 227
Score = 157 (60.3 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 52/187 (27%), Positives = 89/187 (47%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
P VE V +IACG H+ ++ G + S G + G+LG D+ K +D +
Sbjct: 277 PCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRS-KQDLGM-KPVDITE 334
Query: 356 NINVELVACGEHHTCAVTLSGD--MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH 413
+ + +A G H+ A+ G+ + +WG + LG G +L P+++ G +G
Sbjct: 335 S-PIS-IAAGLGHSLAICNRGERNILSWGWNRSR--QLGRGKPENL--PREVEG-FDGES 387
Query: 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 473
+SVS G H+ VT G+ + +G G G LG G P ++ ++G ++A G
Sbjct: 388 PASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVEGC-VLQAVAGF 446
Query: 474 WHTAAVV 480
H+ +V
Sbjct: 447 DHSLILV 453
Score = 131 (51.2 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 54/219 (24%), Positives = 96/219 (43%)
Query: 264 VFIWGECT-GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
+++WG G LG GI +++ VP VE+ V ++ G HA +T
Sbjct: 159 LWVWGRSKRGQLGLGNGI----------IEARVPSRVENLAAEHVVKVSLGWGHALALTV 208
Query: 323 QGEVFSWGEELGGRLGH-GVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 381
G+VF WG GR+G+ G+ + S L+D++ + +++ G HH +GD+
Sbjct: 209 DGKVFGWGYVADGRVGNVGLPLEAS---LLDSITDGSMK----G-HHA-----AGDLNLE 255
Query: 382 GGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 440
+ N+M + W P + V+ ++CG H+ ++ G L + G
Sbjct: 256 AAEKKVVEAMSKENDMPIAWEPCLVEETCNE-KVADIACGSDHSLILCHDGTLLSAGSNI 314
Query: 441 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
+G LG + P VD + + A G+ H+ A+
Sbjct: 315 YGQLGRSKQDLGMKP--VDITES--PISIAAGLGHSLAI 349
Score = 122 (48.0 bits), Expect = 0.00062, P = 0.00062
Identities = 41/143 (28%), Positives = 65/143 (45%)
Query: 519 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG----DPKANGKL-PTRV 573
PT V+ L + +S GH ++A+T++G ++ G GQLG D + + P RV
Sbjct: 74 PTVVSNLPS-DISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRV 132
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDK 632
EG N A G A+ + ++ WG+ G+LG G+ + PS VE L +
Sbjct: 133 EGLENVNVQAAFASGVVSAAIGDDGS-LWVWGRSKRGQLGLGNGIIEARVPSRVENLAAE 191
Query: 633 QVKSIVCGTSFTAAICLHKWVSG 655
V + G A+ + V G
Sbjct: 192 HVVKVSLGWGHALALTVDGKVFG 214
Score = 118 (46.6 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 31/92 (33%), Positives = 42/92 (45%)
Query: 536 GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVL 595
GHSL + ++ + G QLG K LP VEG ++ G H +
Sbjct: 344 GHSLAICNRGERNILSWGWNRSRQLGRGKPEN-LPREVEG-FDGESPASVSAGRVHSLCV 401
Query: 596 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 627
T + E + WG G NGRLG G + D P L+E
Sbjct: 402 TEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLE 433
Score = 106 (42.4 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 37/142 (26%), Positives = 60/142 (42%)
Query: 519 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKAN-GKLPTRVEGKL 577
P V ++CG ++ L G + + GS +YGQLG K + G P +
Sbjct: 277 PCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDI---- 332
Query: 578 TKNFVEEIACGDYHVAVLTSRTE--VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 635
T++ + IA G H + +R E + +WG + +LG G + N P VE +
Sbjct: 333 TESPIS-IAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPE--NLPREVEGFDGESPA 389
Query: 636 SIVCGTSFTAAICL--HKWVSG 655
S+ G + + WV G
Sbjct: 390 SVSAGRVHSLCVTEKGEAWVWG 411
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 289 (106.8 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 63/175 (36%), Positives = 101/175 (57%)
Query: 310 IACGGRHAALVTKQ--GEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVACGE 366
I CG H+ ++K GE+F+WG+ L G+LG G + + + P+L++ L + + ++ G+
Sbjct: 140 ITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGK 199
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 426
H+ A+++SG++Y+WG ++ G LG G+ P + L+ V ++CG HTA+
Sbjct: 200 AHSMALSMSGNIYSWGRND--LGQLGLGHTNGEDFPSLIEA-LDNQKVEFLACGGSHTAL 256
Query: 427 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV-WHTAAVV 480
+T G +FTFG G +G LGH + PR V L G R + ACG WHT A V
Sbjct: 257 LTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYV 311
Score = 248 (92.4 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 56/154 (36%), Positives = 85/154 (55%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
P+ VE + + I+ G H+ ++ G ++SWG G+LG G + P LI+AL
Sbjct: 181 PQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALD 240
Query: 356 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 415
N VE +ACG HT +T G ++T+G +G LGH + + P+ + L G V+
Sbjct: 241 NQKVEFLACGGSHTALLTKDGLVFTFGAGK--YGQLGHNSTQNELRPRLVT-ELAGNRVT 297
Query: 416 SVSCGP-WHT-AVVTSAGQLFTFGDGTFGVLGHG 447
V+CG WHT A V+ G++F+FG G G LG+G
Sbjct: 298 QVACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNG 331
Score = 233 (87.1 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 74/277 (26%), Positives = 130/277 (46%)
Query: 414 VSSVSCGPWHTAVVTSA--GQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRTVRAA 470
+ ++CG +H+ ++ G+LF +G G LG G S+ TP+ V+ L G+ V+ +
Sbjct: 137 IIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQIS 196
Query: 471 CGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNF 530
G H+ A+ G +++W P+ + AL
Sbjct: 197 AGKAHSMAL------------SMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKV 244
Query: 531 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGD- 589
++CG S T LT G V+T G+ YGQLG +L R+ +L N V ++ACG
Sbjct: 245 EFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSR 304
Query: 590 YH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 648
+H +A ++ +V+++G G G+LG+G T ++ P ++ ++++K TS I
Sbjct: 305 WHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELK-FESRTSEKELIM 363
Query: 649 LHKWVSGVDQSMC--SGCRIPFNFKRKRHNCYNCGLV 683
++G +QS+ G + P+ R+R N G V
Sbjct: 364 ----IAGGNQSILLWMGKKNPYVNLRRRIPTLNEGTV 396
Score = 192 (72.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 43/130 (33%), Positives = 75/130 (57%)
Query: 521 CVAALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT-RVEGKL 577
C+ L E + Q++CG HSL ++ G ++ G ++GQLG + +PT ++ L
Sbjct: 130 CI--LQEKSIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHL 187
Query: 578 TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 637
+ + +I+ G H L+ +Y+WG+ G+LG G T+ +FPSL+EAL +++V+ +
Sbjct: 188 SGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFL 247
Query: 638 VCGTSFTAAI 647
CG S TA +
Sbjct: 248 ACGGSHTALL 257
Score = 163 (62.4 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 52/146 (35%), Positives = 75/146 (51%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
++ WG D G LG G H +G + F P +E+ V+ +ACGG H AL+TK
Sbjct: 211 IYSWGR--NDLGQLGLG-HTNG-------EDF-PSLIEALDNQKVEFLACGGSHTALLTK 259
Query: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH-HTCA-VTLSGDMYT 380
G VF++G G+LGH + P+L+ L V VACG HT A V+ G +++
Sbjct: 260 DGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYVSDLGKVFS 319
Query: 381 WG-GSNCNFGLLGHGNEMSLWLPKKL 405
+G G G G N++ + LP KL
Sbjct: 320 FGSGKEGQLGNGGTHNQL-IPLPMKL 344
Score = 37 (18.1 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
PKK + + + SV G H +++S G+ F +
Sbjct: 84 PKKCIKLGKKMKIHSVDQGAEHMLILSSDGKPFEY 118
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 282 (104.3 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 76/272 (27%), Positives = 131/272 (48%)
Query: 288 GVKMDSFVPKAVESAVVLDVQNIACG-GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 346
G + VPK +E+ + +++ G G H L T+ GEV++WG +LG+G +
Sbjct: 57 GDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGV 116
Query: 347 HPKLIDA---LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK 403
P + LK + +E VACG HH+ A++ GD+Y WG +NC G +G G+ + P+
Sbjct: 117 TPVQVCTNLLLKKV-IE-VACGSHHSMALSFDGDLYAWGYNNC--GQVGSGSTANQPTPR 172
Query: 404 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKG 463
+++ L+ V ++CG + V + G+++ +G G LG G+ + TP V +L G
Sbjct: 173 RVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHG 232
Query: 464 LRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVA 523
+ ++ ACG HT A+ + G L+ W K +L P +
Sbjct: 233 VCILQIACGYAHTLALTD------------EGLLYAWGANTYGQLGTGNKSNQLSPLQIM 280
Query: 524 ALVEPNFCQVSCGHSL--TVALTTTGHVYTMG 553
+ + +++ HS + A T +G VY G
Sbjct: 281 -MEKERVVEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 263 (97.6 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 87/295 (29%), Positives = 128/295 (43%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH-HTCAVTLS 375
A T EVF +G LG G PK ++AL + ++ G H T
Sbjct: 34 AIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTED 93
Query: 376 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
G++Y WG + + LG+G P ++ L V V+CG H+ ++ G L+
Sbjct: 94 GEVYAWGHNG--YSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYA 151
Query: 436 FGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXX 494
+G G +G G + TPR V + L+ V ACG + AVV
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVN------------N 199
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
G+++ W +L P VAAL Q++CG++ T+ALT G +Y G+
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGA 259
Query: 555 PVYGQLGDP-KANGKLPTRVEGKLTKNFVEEIA-CGDYHV-AVLTSRTEVYTWGK 606
YGQLG K+N P ++ + K V EIA C H A T +VY WG+
Sbjct: 260 NTYGQLGTGNKSNQLSPLQI--MMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ 312
Score = 229 (85.7 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 75/268 (27%), Positives = 117/268 (43%)
Query: 383 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW-HTAVVTSAGQLFTFGDGTF 441
G NC+ LG G+ S +PKKL L G +SS+S G H + T G+++ +G +
Sbjct: 47 GLNCS-NCLGTGDSQSTIVPKKLEA-LCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGY 104
Query: 442 GVLGHGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTW 500
LG+G TP +V +L + + ACG H+ A+ G L+ W
Sbjct: 105 SQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMAL------------SFDGDLYAW 152
Query: 501 XXXXXXXXXXXXKEARLVPTCVA-ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 559
+ P V+ L + ++CG + ++A+ G VY G GQ
Sbjct: 153 GYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQ 212
Query: 560 LG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 618
LG N P RV L + +IACG H LT +Y WG G+LG G+
Sbjct: 213 LGLGNNGNQLTPCRVAA-LHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKS 271
Query: 619 DRNFPSLVEALKDKQVKSIVCGTSFTAA 646
++ P + K++ V+ C ++ T+A
Sbjct: 272 NQLSPLQIMMEKERVVEIAACHSAHTSA 299
Score = 192 (72.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 54/167 (32%), Positives = 81/167 (48%)
Query: 283 SGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD 342
SGS A V ++ +V+ IACG + V GEV+ WG G+LG G +
Sbjct: 162 SGSTANQPTPRRVSNCLQDKMVV---GIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNN 218
Query: 343 SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP 402
+ P + AL + + +ACG HT A+T G +Y WG + +G LG GN+ + P
Sbjct: 219 GNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANT--YGQLGTGNKSNQLSP 276
Query: 403 KKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGD--GTFGVLGH 446
++ E + V +C HT A T +GQ++ +G G VL H
Sbjct: 277 LQIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVVLPH 322
Score = 191 (72.3 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 61/223 (27%), Positives = 91/223 (40%)
Query: 428 TSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW-HTAAVVEVMVGX 486
T ++F FG LG GD S P+++++L G + + G H E
Sbjct: 38 THNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTE----- 92
Query: 487 XXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAA-LVEPNFCQVSCGHSLTVALTT 545
G+++ W + P V L+ +V+CG ++AL+
Sbjct: 93 -------DGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSF 145
Query: 546 TGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 604
G +Y G GQ+G AN P RV L V IACG + + EVY W
Sbjct: 146 DGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGW 205
Query: 605 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
G NG+LG G+ ++ P V AL + I CG + T A+
Sbjct: 206 GYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLAL 248
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 278 (102.9 bits), Expect = 7.2e-21, P = 7.2e-21
Identities = 86/296 (29%), Positives = 132/296 (44%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH-HTCAVTLS 375
A +T EV+ G LG G PK +D L + ++ G H VT
Sbjct: 34 AIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTED 93
Query: 376 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
G++Y WG + + LG+G P ++ L+G V+ VSCG H+ +T G++F
Sbjct: 94 GELYAWGHNG--YSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFA 151
Query: 436 FGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXX 494
+G G +G G + TPR+V + L+ V ACG + AV +
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTD------------N 199
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFC--QVSCGHSLTVALTTTGHVYTM 552
G+++ W +L P + AL FC Q++ G++ ++ALT G +Y
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPCRLIAL--QGFCVLQIASGYAHSLALTDEGLLYAW 257
Query: 553 GSPVYGQLGDP-KANGKLPTRVEGKLTKNFVEEIACGDYHV-AVLTSRTEVYTWGK 606
G+ YGQLG K+N P +V + + VE AC H A T +VY WG+
Sbjct: 258 GANTYGQLGTGNKSNQLSPVQVMTE-KERIVEIAACHSTHTSAAKTQSGQVYMWGQ 312
Score = 265 (98.3 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 72/270 (26%), Positives = 128/270 (47%)
Query: 288 GVKMDSFVPKAVESAVVLDVQNIACG-GRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 346
G + PK ++ + +++ G G H LVT+ GE+++WG +LG+G +
Sbjct: 57 GDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGV 116
Query: 347 HPKLIDA-LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 405
P L+ L+ V V+CG HH+ A+T G+++ WG +NC G +G G+ + P+K+
Sbjct: 117 SPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNC--GQVGSGSTANQPTPRKV 174
Query: 406 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR 465
+ L+ + +++CG + VT G+++ +G G LG G+ + TP + +L+G
Sbjct: 175 SNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFC 234
Query: 466 TVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAAL 525
++ A G H+ A+ + G L+ W K +L P V
Sbjct: 235 VLQIASGYAHSLALTD------------EGLLYAWGANTYGQLGTGNKSNQLSPVQVMTE 282
Query: 526 VEPNFCQVSCGHSL--TVALTTTGHVYTMG 553
E +++ HS + A T +G VY G
Sbjct: 283 KE-RIVEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 228 (85.3 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 78/279 (27%), Positives = 123/279 (44%)
Query: 372 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW-HTAVVTSA 430
+T ++Y G NC+ LG G+ S PKKL+ L G + S+S G H +VT
Sbjct: 37 ITHDDEVYVLG-LNCS-NCLGTGDSQSTIAPKKLDC-LSGKKLISLSYGSGPHVLLVTED 93
Query: 431 GQLFTFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGXXXX 489
G+L+ +G + LG+G +P V + L+G R +CG H+ A+
Sbjct: 94 GELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTH-------- 145
Query: 490 XXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPN-FCQVSCGHSLTVALTTTGH 548
G++F W + P V+ ++ ++CG + ++A+T G
Sbjct: 146 ----EGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGE 201
Query: 549 VYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 607
VY G GQLG N P R+ L V +IA G H LT +Y WG
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLTPCRLIA-LQGFCVLQIASGYAHSLALTDEGLLYAWGAN 260
Query: 608 ANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
G+LG G+ ++ P V K++ V+ C ++ T+A
Sbjct: 261 TYGQLGTGNKSNQLSPVQVMTEKERIVEIAACHSTHTSA 299
Score = 195 (73.7 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 62/186 (33%), Positives = 90/186 (48%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG G +G SGS A V +++ V++ NIACG + VT
Sbjct: 149 VFAWGY-NNCGQVG-----SGSTANQPTPRKVSNCLQNKVIV---NIACGQTSSMAVTDN 199
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
GEV+ WG G+LG G + + P + AL+ V +A G H+ A+T G +Y WG
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGA 259
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGD--GT 440
+ +G LG GN+ + P ++ E I V +C HT A T +GQ++ +G G
Sbjct: 260 NT--YGQLGTGNKSNQLSPVQVMTEKERI-VEIAACHSTHTSAAKTQSGQVYMWGQCRGQ 316
Query: 441 FGVLGH 446
VL H
Sbjct: 317 AIVLPH 322
Score = 193 (73.0 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 60/224 (26%), Positives = 93/224 (41%)
Query: 427 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW-HTAAVVEVMVG 485
+T +++ G LG GD S P+++D L G + + + G H V E
Sbjct: 37 ITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTE---- 92
Query: 486 XXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVE-PNFCQVSCGHSLTVALT 544
G+L+ W + P V+ ++ +VSCG ++ALT
Sbjct: 93 --------DGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALT 144
Query: 545 TTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 603
G V+ G GQ+G AN P +V L + IACG +T EVY
Sbjct: 145 HEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYG 204
Query: 604 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
WG NG+LG G+ ++ P + AL+ V I G + + A+
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLAL 248
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 277 (102.6 bits), Expect = 9.3e-21, P = 9.3e-21
Identities = 90/295 (30%), Positives = 131/295 (44%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH-HTCAVTLS 375
A VT EVF +G LG G + PK ++AL ++ ++ G H T
Sbjct: 34 AIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTED 93
Query: 376 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
G +Y WG + + LG+G P ++ L V V+CG H+ + + G+LF
Sbjct: 94 GVVYAWGHNG--YSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFA 151
Query: 436 FGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXX 494
+G G +G G + TPR+V + L R V ACG + AV++
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLD------------S 199
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
G+++ W +L P VAAL Q+ CG++ T+ALT G +Y G+
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 555 PVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIA-CGDYHV-AVLTSRTEVYTWGK 606
YGQLG N L PT++ + K V EIA C H A T VY WG+
Sbjct: 260 NTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 273 (101.2 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 77/288 (26%), Positives = 131/288 (45%)
Query: 273 DGILGGGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACG-GRHAALVTKQGEVFSWG 330
D + G++ S G + VPK +E+ +++++ G G H L T+ G V++WG
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWG 100
Query: 331 EELGGRLGHGVDSDVSHPKLIDALKNINVELV---ACGEHHTCAVTLSGDMYTWGGSNCN 387
+LG+G + P + N+ ++ V ACG HH+ A+ G+++ WG +NC
Sbjct: 101 HNGYSQLGNGTTNQGIAP--VQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNC- 157
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G +G G+ + P+K+ L V +++CG + V +G+++ +G G LG G
Sbjct: 158 -GQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLG 216
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
+ + TP V +L G+ + CG HT A+ + G L+ W
Sbjct: 217 NNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTD------------EGLLYAWGANTYGQ 264
Query: 508 XXXXXKEARLVPTCVAALVEPNFCQVSCGHSL--TVALTTTGHVYTMG 553
K L PT + E +++ HS + A T GHVY G
Sbjct: 265 LGTGSKNNLLSPTQIMVEKE-RVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 222 (83.2 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 76/281 (27%), Positives = 120/281 (42%)
Query: 372 VTLSGDMYTWG--GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW-HTAVVT 428
VT + +++ +G SNC LG G+ S +PKKL L G + S+S G H + T
Sbjct: 37 VTDNDEVFVFGLNYSNC----LGTGDNQSTLVPKKLEA-LCGKKIKSLSYGSGPHVLLTT 91
Query: 429 SAGQLFTFGDGTFGVLGHGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGXX 487
G ++ +G + LG+G P +V +L + + ACG H+ A+
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALA------- 144
Query: 488 XXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVA-ALVEPNFCQVSCGHSLTVALTTT 546
G+LF W + P V L ++CG + ++A+ +
Sbjct: 145 -----ADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDS 199
Query: 547 GHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 605
G VY G GQLG N P RV L V +I CG H LT +Y WG
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAA-LHGMCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 606 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
G+LG G ++ P+ + K++ ++ C ++ T+A
Sbjct: 259 ANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA 299
Score = 195 (73.7 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 65/225 (28%), Positives = 94/225 (41%)
Query: 427 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGX 486
VT ++F FG LG GD S P+++++L G + + G G
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGS-----------GP 85
Query: 487 XXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPT--CVAALVEPNFCQVSCGHSLTVALT 544
G ++ W + P C L++ +V+CG ++AL
Sbjct: 86 HVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIK-QVIEVACGSHHSMALA 144
Query: 545 TTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVY 602
G ++ G GQ+G AN P +V L V IACG +AVL S EVY
Sbjct: 145 ADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSG-EVY 203
Query: 603 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
WG NG+LG G+ ++ P V AL V IVCG + T A+
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLAL 248
Score = 190 (71.9 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 54/180 (30%), Positives = 85/180 (47%)
Query: 273 DG-ILGGGIHRSGSY-AGVKMDSFVPKAVESAV-VLDVQNIACGGRHAALVTKQGEVFSW 329
DG + G + G +G + P+ V + + V NIACG + V GEV+ W
Sbjct: 146 DGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGW 205
Query: 330 GEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFG 389
G G+LG G + + P + AL + V + CG HT A+T G +Y WG + +G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANT--YG 263
Query: 390 LLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGD--GTFGVLGH 446
LG G++ +L P ++ E + + +C HT A T G ++ +G G +L H
Sbjct: 264 QLGTGSKNNLLSPTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 322
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 176 (67.0 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 39/81 (48%), Positives = 49/81 (60%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 461
P L+ PLE V++VSCG HTA +T G+L T+G G +G LGHGDR S PR V+ L
Sbjct: 107 PALLDLPLEPA-VAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQL 165
Query: 462 --KGLRTVRAACGVWHTAAVV 480
+GLR CG W+T V
Sbjct: 166 WAEGLRAQEVVCGPWNTYVCV 186
Score = 148 (57.2 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 33/87 (37%), Positives = 46/87 (52%)
Query: 348 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 407
P L+D V V+CG HT A+T G++ TWG +G LGHG+ S P+++
Sbjct: 107 PALLDLPLEPAVAAVSCGSRHTAALTRGGELNTWGWGK--YGQLGHGDRASCDHPRRVEQ 164
Query: 408 P-LEGIHVSSVSCGPWHTAV-VTSAGQ 432
EG+ V CGPW+T V V G+
Sbjct: 165 LWAEGLRAQEVVCGPWNTYVCVLQQGE 191
Score = 124 (48.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 27/90 (30%), Positives = 48/90 (53%)
Query: 287 AGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 346
A + + +F P ++ + V ++CG RH A +T+ GE+ +WG G+LGHG +
Sbjct: 99 AFISIQAF-PALLDLPLEPAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCD 157
Query: 347 HPKLIDAL--KNINVELVACGEHHTCAVTL 374
HP+ ++ L + + + V CG +T L
Sbjct: 158 HPRRVEQLWAEGLRAQEVVCGPWNTYVCVL 187
Score = 121 (47.7 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 582 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL--KDKQVKSIVC 639
V ++CG H A LT E+ TWG G G+LGHGD + P VE L + + + +VC
Sbjct: 118 VAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLWAEGLRAQEVVC 177
Query: 640 GTSFTAAICL 649
G + +C+
Sbjct: 178 GP-WNTYVCV 186
Score = 107 (42.7 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 335 GRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG 392
G+LGHG P+L++AL + + VA G H+ V+ GD+Y WG + G LG
Sbjct: 11 GQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNES--GQLG 66
Score = 103 (41.3 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 28/78 (35%), Positives = 38/78 (48%)
Query: 519 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKANGKLPTRVEGKL 577
P + +EP VSCG T ALT G + T G YGQLG +A+ P RVE
Sbjct: 107 PALLDLPLEPAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLW 166
Query: 578 TKNF-VEEIACGDYHVAV 594
+ +E+ CG ++ V
Sbjct: 167 AEGLRAQEVVCGPWNTYV 184
Score = 94 (38.1 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 389 GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
G LGHG+ S P+ + L G+ + +V+ G WH+A V+ G L+ +G G LG
Sbjct: 11 GQLGHGSLESEQQPRLVEA-LGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 85 (35.0 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 281 HRSGSYAGVKMDSFV-PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG 338
HR G ++S P+ VE+ + ++ +A GG H+A V+ G+++ WG G+LG
Sbjct: 8 HRHGQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 77 (32.2 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
G LGHG S PR V++L G+ A G WH+A V
Sbjct: 11 GQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACV 48
Score = 51 (23.0 bits), Expect = 0.00058, Sum P(2) = 0.00057
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 622 FPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSGCRIPFNFKRKRHNC 677
FP+L++ + V ++ CG+ TAA+ L+ W G + G R + R+
Sbjct: 106 FPALLDLPLEPAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQL 165
Query: 678 YNCGL 682
+ GL
Sbjct: 166 WAEGL 170
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 514 EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP 563
E+ P V AL V+ G + ++ G +Y G GQLG P
Sbjct: 19 ESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGLP 68
Score = 38 (18.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 183 PPKNVLDKALSDAVLYAAPPKVLLPSE 209
P + V ++ D + A P LLP E
Sbjct: 68 PSRAVAEEQAEDEDMGAGPEDPLLPGE 94
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 278 (102.9 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 97/349 (27%), Positives = 151/349 (43%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSW-------GEE-LGGRLGHGVDSDVSHPKLIDALKNI 357
+V ++ G VTK G + +W GE L G + +S + ++ +
Sbjct: 341 EVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFIS--RFLEGQSGV 398
Query: 358 NVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS 416
++ V+CG+ T +T G + T+G GSN G LGHGN + PK + L G +
Sbjct: 399 TIKSVSCGDLFTTCLTDRGIIMTFGSGSN---GCLGHGNFNDVTQPKIVEALL-GYELVQ 454
Query: 417 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 476
VSCG H VT+ ++F++G G G LG + S + P++V R CGV
Sbjct: 455 VSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGV-DC 513
Query: 477 AAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXX--XKEARLVPTCVAA-LVEPNFCQV 533
+ ++ KL +E L +A L +
Sbjct: 514 SMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYI 573
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHV 592
G + +VA+T G +T GS +GQLG + + ++P +V G + ACGD
Sbjct: 574 DIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGL---QGITMAACGDAFT 630
Query: 593 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ--VKSIVC 639
+ + EVYTWGKGA GRLG + +D P V+ + V S+ C
Sbjct: 631 LAIGAEGEVYTWGKGARGRLGRKE-EDFGIPKPVQLDESHAFTVTSVAC 678
Score = 266 (98.7 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 77/301 (25%), Positives = 143/301 (47%)
Query: 294 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 353
F+ + +E + +++++CG +T +G + ++G G LGHG +DV+ PK+++A
Sbjct: 387 FISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEA 446
Query: 354 LKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 412
L + V+CG H AVT ++++WG G N G LG + S P++++ P +
Sbjct: 447 LLGYELVQVSCGASHVLAVTNEREVFSWGRGDN---GRLGLATQDSHNCPQQVSLPAD-F 502
Query: 413 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS-VSTPR---EVDSLKGLRTVR 468
V CG + ++++ Q+ G+ F LG D++S P +V+ + + V+
Sbjct: 503 EAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGL-DKVSGTEEPSSFCQVEEVHLFQLVQ 561
Query: 469 AACGVWHTAAVVEVMVGXXXXXXXXX-GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVE 527
+A +T +V + +G G+ FT+ + + VP V+ L
Sbjct: 562 SA--PLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGL-- 617
Query: 528 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF-VEEIA 586
+CG + T+A+ G VYT G G+LG + + +P V+ + F V +A
Sbjct: 618 QGITMAACGDAFTLAIGAEGEVYTWGKGARGRLGRKEEDFGIPKPVQLDESHAFTVTSVA 677
Query: 587 C 587
C
Sbjct: 678 C 678
Score = 238 (88.8 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 84/323 (26%), Positives = 137/323 (42%)
Query: 343 SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFG---LLGHGNEMS- 398
S +S P + L N V V+ G VT SG + TW + G L G +M
Sbjct: 327 SGISTPLRLPML-NTEVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQP 385
Query: 399 LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 458
++ + L G G+ + SVSCG T +T G + TFG G+ G LGHG+ V+ P+ V
Sbjct: 386 QFISRFLEGQ-SGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIV 444
Query: 459 DSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLV 518
++L G V+ +CG H AV ++F+W +++
Sbjct: 445 EALLGYELVQVSCGASHVLAVTNER------------EVFSWGRGDNGRLGLATQDSHNC 492
Query: 519 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPT---RVE 574
P V+ + +V CG ++ ++T + G+ + +LG K +G + P+ +VE
Sbjct: 493 PQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVE 552
Query: 575 ----------GKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 624
L + I G H +T + + +T+G +G+LG P
Sbjct: 553 EVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPY 612
Query: 625 LVEALKDKQVKSIVCGTSFTAAI 647
V L+ + CG +FT AI
Sbjct: 613 QVSGLQG--ITMAACGDAFTLAI 633
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 253 (94.1 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 96/351 (27%), Positives = 141/351 (40%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN-INVELVACGEHHTCAVTLS 375
A + ++ EV+ WG GG+ S P+ +DA+K+ + V G H VT+
Sbjct: 350 AVVTSRTSEVYVWG---GGK---------STPQKLDAIKSGCSARQVCAGNTHFAVVTVE 397
Query: 376 GDMYTW----GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
++YTW GG+ + G LGHG+ S PK + L+G + VSCG T +T G
Sbjct: 398 KELYTWVNMQGGTKLH-GQLGHGDRASYRQPKHVE-KLQGKAIRQVSCGDDFTVCITDEG 455
Query: 432 QLFTFGDGTFGVLGHGDRIS--VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXX 489
QL+ FG +G +G V P ++D + +CG H A +
Sbjct: 456 QLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTR-------- 507
Query: 490 XXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHV 549
+++TW +E P V N V CG T LT TG V
Sbjct: 508 ----NREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTFLLTQTGKV 563
Query: 550 YTMGSPVYGQLG-DPKANG--------KLPTRVEGKLTKNF----VEEIACGDYHVAVLT 596
G + +LG + +G ++P L K + I+ G H A +
Sbjct: 564 LACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTASID 623
Query: 597 SRTEVYTWGKGANGRLGHGDTDDR-NFPSLVEALKDKQVKSIVCGTSFTAA 646
R + T+G G+LG GD L L KQV + CG FT A
Sbjct: 624 ERGRLLTFGSNKCGQLGVGDYKKHLGINLLAGPLGGKQVIRVSCGDEFTIA 674
Score = 218 (81.8 bits), Expect = 2.1e-20, Sum P(4) = 2.1e-20
Identities = 57/176 (32%), Positives = 90/176 (51%)
Query: 308 QNIACGGRHAALVTKQGEVFSW-----GEELGGRLGHGVDSDVSHPKLIDALKNINVELV 362
+ + G H A+VT + E+++W G +L G+LGHG + PK ++ L+ + V
Sbjct: 382 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQGKAIRQV 441
Query: 363 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLG----HGNEM--SLWLPKKLNGPLEGIHVSS 416
+CG+ T +T G +Y +G +G +G +G+E+ L L L P+E
Sbjct: 442 SCGDDFTVCITDEGQLYAFGSDY--YGCIGIDKAYGSEVLEPLQLDFFLTNPVE-----Q 494
Query: 417 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
VSCG H AV+T +++T+G G +G LG TP++VD K L V CG
Sbjct: 495 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCG 550
Score = 218 (81.8 bits), Expect = 7.7e-14, Sum P(3) = 7.7e-14
Identities = 77/319 (24%), Positives = 138/319 (43%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDA 353
PK VE ++ ++CG +T +G+++++G + G +G S+V P +D
Sbjct: 427 PKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDF 486
Query: 354 LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN-FGLLGHGNEMSLWLPKKLNGPLEGI 412
VE V+CG++H +T + ++YTWG C +G LG +E + P+K++ P + +
Sbjct: 487 FLTNPVEQVSCGDNHVAVLTRNREVYTWG---CGEYGRLGLDSEEDHYTPQKVDVP-KTL 542
Query: 413 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR----ISVSTPREVDSLKGLRTVR 468
++ SV CG T ++T G++ G F LG I+ T EV L T+
Sbjct: 543 NIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSL-TLA 601
Query: 469 AACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAA-LVE 527
+ + G+L T+ + L +A L
Sbjct: 602 KQLSFYKIRTISPGKT--HTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAGPLGG 659
Query: 528 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DP--KANGK-----LPTRVEGKLTK 579
+VSCG T+A T H++ G+ G+L P +A+G P + G L
Sbjct: 660 KQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWPRPIFGSL-- 717
Query: 580 NFVEEIACGDYHVAVLTSR 598
+ V +++C +H ++ +
Sbjct: 718 HHVPDLSCRGWHTIIVVEK 736
Score = 182 (69.1 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 64/237 (27%), Positives = 103/237 (43%)
Query: 284 GSYAGVKMDS----FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG----EELG- 334
G Y + +DS + P+ V+ L++ ++ CG L+T+ G+V + G +LG
Sbjct: 517 GEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGL 576
Query: 335 -----GRLGHGVDSDVSHPKLIDALKNIN---VELVACGEHHTCAVTLSGDMYTWGGSNC 386
G + H +V + + K ++ + ++ G+ HT ++ G + T+G + C
Sbjct: 577 NQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKC 636
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG- 445
G LG G+ L GPL G V VSCG T T +F +G+G G L
Sbjct: 637 --GQLGVGDYKKHLGINLLAGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM 694
Query: 446 ------HGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXG 495
HG I S PR + SL + + +C WHT VVE ++ G
Sbjct: 695 TPTERAHGSDICTSWPRPIFGSLHHVPDL--SCRGWHTIIVVEKVLNSKTIRSNSSG 749
Score = 128 (50.1 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 567 GK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW-----GKGANGRLGHGDTDDR 620
GK P +++ + ++ G+ H AV+T E+YTW G +G+LGHGD
Sbjct: 365 GKSTPQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASY 424
Query: 621 NFPSLVEALKDKQVKSIVCGTSFTAAI 647
P VE L+ K ++ + CG FT I
Sbjct: 425 RQPKHVEKLQGKAIRQVSCGDDFTVCI 451
Score = 108 (43.1 bits), Expect = 2.1e-20, Sum P(4) = 2.1e-20
Identities = 28/88 (31%), Positives = 41/88 (46%)
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDY 590
+S G + T ++ G + T GS GQLG D K + + + G L V ++CGD
Sbjct: 612 ISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGI-NLLAGPLGGKQVIRVSCGDE 670
Query: 591 HVAVLTSRTEVYTWGKGANGRLGHGDTD 618
T ++ WG G NGRL T+
Sbjct: 671 FTIAATDDNHIFAWGNGGNGRLAMTPTE 698
Score = 61 (26.5 bits), Expect = 2.1e-20, Sum P(4) = 2.1e-20
Identities = 13/47 (27%), Positives = 29/47 (61%)
Query: 859 VDDAKRTSEEVIKLRAQVEELTRKSQ-LQEIELE-RTTRQLKEALAV 903
+DD K+ +E ++L AQ++ ++ +Q++E+ + T+ KE + V
Sbjct: 915 LDDQKKLQQETLRLSAQLQRFCSGTEGIQQVEVHSKGTQTAKEEMEV 961
Score = 38 (18.4 bits), Expect = 2.1e-20, Sum P(4) = 2.1e-20
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 42 FRLANDESILIWISGKEEKHLKLSHVSR 69
+R D+S+++W KE +LS R
Sbjct: 79 YRRTEDDSLVVW---KEVDLTRLSEKER 103
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 274 (101.5 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 105/374 (28%), Positives = 170/374 (45%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWG--EELG-GRL--------GHGVDSDVSH--PKLID- 352
V ++A GG H+A ++ G V++WG ++ GRL G VD+D+ P ++
Sbjct: 110 VVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEG 169
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL-PKKLNGPLEG 411
AL ++ V V C ++ T A+T +G +TWG C+ G+LG+ + P ++ P
Sbjct: 170 ALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLP--- 226
Query: 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG----DRISVSTPREVDSLKGLRTV 467
+ ++ G H +T+ G+++T+G+G LG R+ TP+ + +LK + +V
Sbjct: 227 -EICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPL-ALKNIISV 284
Query: 468 RAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX---XXXXXKEARLV--PTCV 522
A G +H+ A+ G+++ W +E ++ PT V
Sbjct: 285 GA--GSYHSFAI------------DNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLV 330
Query: 523 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG------------DPKANG--- 567
AL N ++ G T+AL G V G QLG D K N
Sbjct: 331 DALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYL 390
Query: 568 KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD-DRNFPSLV 626
PT + G LT V ++ CG +H +TS +VY+WG N +G GD D D P+LV
Sbjct: 391 STPTIIPG-LTN--VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLV 447
Query: 627 EALKDKQVKSIVCG 640
+ K+V V G
Sbjct: 448 RSKAIKEVAIRVAG 461
Score = 187 (70.9 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 81/299 (27%), Positives = 129/299 (43%)
Query: 377 DMYTWGGSNCNFGLLGHGNE-MSLWLPKKLNGPL--EGIHVSSVSCGPWHTAVVTSAGQL 433
++Y +G + N LG G E M + +LN L + + V ++ G H+A ++ G++
Sbjct: 72 NVYVFGSGSMNE--LGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRV 129
Query: 434 FTFG---DGTFGVLG------HGDRIS----VSTPREVD-SLKGLRTVRAACGVWHTAAV 479
+T+G D G L +GD++ TP +V+ +L LR + C TAA+
Sbjct: 130 YTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAI 189
Query: 480 VEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSL 539
+ G FTW +++ + P CQ++ G
Sbjct: 190 TD------------NGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPEICQLATGTDH 237
Query: 540 TVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLT------KNFVEEIACGDYHVA 593
+ALTTTG VYT G+ QLG + R++G LT KN + + G YH
Sbjct: 238 IIALTTTGKVYTWGNGQQFQLGRRMLERR---RLQG-LTPQPLALKNIIS-VGAGSYHSF 292
Query: 594 VLTSRTEVYTWGKGANGRLGHGDTDDRNF-----PSLVEALKDKQVKSIVCGTSFTAAI 647
+ ++ VY WG + G D+ P+LV+AL+ VKSI G T A+
Sbjct: 293 AIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLAL 351
Score = 177 (67.4 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 92/341 (26%), Positives = 135/341 (39%)
Query: 319 LVTKQGEVFSWGEELGGRLGHGVDS-DVSH-PKLIDALKNINVELV--ACGEHHTCAVTL 374
L T++ V+ +G LG G + DV + P+L L V +V A G H+ A++
Sbjct: 66 LPTERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSH 125
Query: 375 SGDMYTWG-GSNCNFGLLG------HG----NEMSLWLPKKLNGPLEGIHVSSVSCGPWH 423
G +YTWG + G L +G N++ P K+ G L + V+ V C
Sbjct: 126 DGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNL 185
Query: 424 TAVVTSAGQLFTFGDGTF----GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
TA +T G FT+G TF GVLG+ D S E ++ + A G H A+
Sbjct: 186 TAAITDNGCCFTWG--TFRCSDGVLGYSD--SQKRTAEPTQMRLPEICQLATGTDHIIAL 241
Query: 480 VEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEAR-LVPTCVAALVEPNFCQVSCGHS 538
GK++TW E R L L N V G
Sbjct: 242 T------------TTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSY 289
Query: 539 LTVALTTTGHVYTMGSPVYGQLG---DPKANGKL---PTRVEGKLTKNFVEEIACGDYHV 592
+ A+ G VY G + Q G + + G + PT V+ N V+ I G++H
Sbjct: 290 HSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYN-VKSITGGEHHT 348
Query: 593 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 633
L V WG+ +LG D P V +KD++
Sbjct: 349 LALLEDGRVLAWGRDDRHQLG---IPDNALPETV--VKDEK 384
Score = 172 (65.6 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 93/346 (26%), Positives = 137/346 (39%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFV----PKAVESAVV-LDVQNIACGGRHAA 318
V+ WG D LG G K+D+ + P VE A+ L V + C A
Sbjct: 129 VYTWG-VNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTA 187
Query: 319 LVTKQGEVFSWGEEL--GGRLGHGVDSD--VSHPKLIDALKNINVELVACGEHHTCAVTL 374
+T G F+WG G LG+ DS + P + L I +L A G H A+T
Sbjct: 188 AITDNGCCFTWGTFRCSDGVLGYS-DSQKRTAEPTQM-RLPEI-CQL-ATGTDHIIALTT 243
Query: 375 SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG----PLEGIHVSSVSCGPWHTAVVTSA 430
+G +YTWG F L G M ++L G PL ++ SV G +H+ + +
Sbjct: 244 TGKVYTWGNGQ-QFQL---GRRMLE--RRRLQGLTPQPLALKNIISVGAGSYHSFAIDNK 297
Query: 431 GQLFTFGDGTFGVLG-----HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV--M 483
G+++ +G G + ++ P VD+L+G G HT A++E +
Sbjct: 298 GRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRV 357
Query: 484 VGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 543
+ G PT + L N QV CG +A+
Sbjct: 358 LAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLT--NVIQVVCGTHHNLAV 415
Query: 544 TTTGHVYTMGSPV-Y--GQLGDPKANGKLPTRVEGKLTKNFVEEIA 586
T+ G VY+ GS Y GQ GD + +PT V K K +A
Sbjct: 416 TSDGKVYSWGSAENYEVGQ-GDNDEDVAVPTLVRSKAIKEVAIRVA 460
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 272 (100.8 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 89/295 (30%), Positives = 131/295 (44%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH-HTCAVTLS 375
A VT EVF +G LG G + PK ++AL ++ ++ G H T
Sbjct: 34 AIYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTED 93
Query: 376 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
G +Y WG + + LG+G P ++ L V V+CG H+ + + G+LF
Sbjct: 94 GVVYAWGHNG--YSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFA 151
Query: 436 FGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXX 494
+G G +G G + TPR+V + L + V ACG + AV++
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLD------------S 199
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
G+++ W +L P VAAL Q+ CG++ T+ALT G +Y G+
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 555 PVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIA-CGDYHV-AVLTSRTEVYTWGK 606
YGQLG N L PT++ + K V EIA C H A T VY WG+
Sbjct: 260 NTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 270 (100.1 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 79/288 (27%), Positives = 131/288 (45%)
Query: 273 DGILGGGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACG-GRHAALVTKQGEVFSWG 330
D + G++ S G + VPK +E+ +++++ G G H L T+ G V++WG
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 331 EELGGRLGHGVDSDVSHPKLIDALKNINVELV---ACGEHHTCAVTLSGDMYTWGGSNCN 387
+LG+G + P I N+ V+ V ACG HH+ A+ G+++ WG +NC
Sbjct: 101 HNGYSQLGNGTTNQGIAP--IQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNC- 157
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G +G G+ + P+K+ L V +++CG + V +G+++ +G G LG G
Sbjct: 158 -GQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLG 216
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
+ + TP V +L G+ + CG HT A+ + G L+ W
Sbjct: 217 NNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTD------------EGLLYAWGANTYGQ 264
Query: 508 XXXXXKEARLVPTCVAALVEPNFCQVSCGHSL--TVALTTTGHVYTMG 553
K L PT + E +++ HS + A T GHVY G
Sbjct: 265 LGTGSKNNLLSPTQIMVEKE-RVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 225 (84.3 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 78/281 (27%), Positives = 120/281 (42%)
Query: 372 VTLSGDMYTWG--GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW-HTAVVT 428
VT S +++ +G SNC LG G+ S +PKKL L G + S+S G H + T
Sbjct: 37 VTDSDEVFVFGLNYSNC----LGTGDNQSTLVPKKLEA-LCGKRIKSLSYGSGPHVLLST 91
Query: 429 SAGQLFTFGDGTFGVLGHGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGXX 487
G ++ +G + LG+G P +V +L + V ACG H+ A+
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALA------- 144
Query: 488 XXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVA-ALVEPNFCQVSCGHSLTVALTTT 546
G+LF W + P V L ++CG + ++A+ +
Sbjct: 145 -----ADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDS 199
Query: 547 GHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 605
G VY G GQLG N P RV L V +I CG H LT +Y WG
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAA-LHGVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 606 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
G+LG G ++ P+ + K++ ++ C ++ T+A
Sbjct: 259 ANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA 299
Score = 201 (75.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 67/225 (29%), Positives = 95/225 (42%)
Query: 427 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGX 486
VT + ++F FG LG GD S P+++++L G R + G G
Sbjct: 37 VTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGS-----------GP 85
Query: 487 XXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVP--TCVAALVEPNFCQVSCGHSLTVALT 544
G ++ W + P C LV+ +V+CG ++AL
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVK-QVVEVACGSHHSMALA 144
Query: 545 TTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVY 602
G ++ G GQ+G AN P +V L V IACG +AVL S EVY
Sbjct: 145 ADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSG-EVY 203
Query: 603 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
WG NG+LG G+ ++ P V AL V IVCG + T A+
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLAL 248
Score = 193 (73.0 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 54/180 (30%), Positives = 85/180 (47%)
Query: 273 DG-ILGGGIHRSGSY-AGVKMDSFVPKAVESAV-VLDVQNIACGGRHAALVTKQGEVFSW 329
DG + G + G +G + P+ V + + V NIACG + V GEV+ W
Sbjct: 146 DGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGW 205
Query: 330 GEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFG 389
G G+LG G + + P + AL + V + CG HT A+T G +Y WG + +G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANT--YG 263
Query: 390 LLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGD--GTFGVLGH 446
LG G++ +L P ++ E + + +C HT A T G ++ +G G +L H
Sbjct: 264 QLGTGSKNNLLSPTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPH 322
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 277 (102.6 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 67/204 (32%), Positives = 105/204 (51%)
Query: 284 GSYAGVKMDS-----FVPKAVESAVVLDVQN-----IACGGRHAALVTKQGEVFSWGEEL 333
G Y V +D + K+ E + + ++N IACG +H+ +T G++F WGE
Sbjct: 87 GEYGAVLLDDGGKVLIMDKSTECSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENA 146
Query: 334 GGRLG-HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG 392
G+LG + P+ + +L I V ++ G +H+ ++LSG ++ WGG++ G LG
Sbjct: 147 LGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSA--GQLG 204
Query: 393 HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV 452
G+ ++P +N L+ + S+SCG HTA + G +FTFG G FG LGH
Sbjct: 205 LGDTTDRFVPTVVNS-LKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDE 263
Query: 453 STPREVDSLKGLRTVRAACGVWHT 476
PR V L G + + CG HT
Sbjct: 264 HHPRLVAELWGSKVSQVTCGRNHT 287
Score = 265 (98.3 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 66/197 (33%), Positives = 106/197 (53%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
+F+WGE G LG ++G+ + P+ ++S + V I+ GG H+ +++
Sbjct: 139 LFVWGE-NALGQLGLRKEQAGTQS--------PRHLQSLCGIPVAQISAGGNHSFVLSLS 189
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G VF WG G+LG G +D P ++++LK + ++CG HT A+ G ++T+G
Sbjct: 190 GVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGS 249
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL-FTFGDGTFG 442
FG LGH + P+ L L G VS V+CG HT V T++ +L ++FG G G
Sbjct: 250 GG--FGQLGHNSFKDEHHPR-LVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQG 306
Query: 443 VLGHGDRISVSTPREVD 459
LG+G+++ S P VD
Sbjct: 307 QLGNGEQVKQSVPLPVD 323
Score = 246 (91.7 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 73/268 (27%), Positives = 123/268 (45%)
Query: 390 LLGHGNEMSLWLPKKLN-GPLEGIH---VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
LL G ++ L + K PL+G+ V ++CG H+ +T+ GQLF +G+ G LG
Sbjct: 93 LLDDGGKV-LIMDKSTECSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLG 151
Query: 446 -HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXX 504
++ +PR + SL G+ + + G H+ + G +F W
Sbjct: 152 LRKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVL------------SLSGVVFGWGGNS 199
Query: 505 XXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 564
R VPT V +L +SCG T AL G V+T GS +GQLG
Sbjct: 200 AGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNS 259
Query: 565 ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE-VYTWGKGANGRLGHGDTDDRNFP 623
+ R+ +L + V ++ CG H V T+ + +Y++G G G+LG+G+ ++ P
Sbjct: 260 FKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVP 319
Query: 624 SLVEA---LKDKQ-VKSIVCGTSFTAAI 647
V+ D+ ++ +V G + + A+
Sbjct: 320 LPVDQPTEYNDEYTIQKLVAGENHSFAL 347
Score = 194 (73.4 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 48/139 (34%), Positives = 70/139 (50%)
Query: 275 ILGGGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 333
+ G G + +G G D FVP V S + +I+CGG H A + K G VF++G
Sbjct: 192 VFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGG 251
Query: 334 GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM-YTWGGSNCNF-GLL 391
G+LGH D HP+L+ L V V CG +HT T S + Y++G C G L
Sbjct: 252 FGQLGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFG---CGMQGQL 308
Query: 392 GHGNEMSLWLPKKLNGPLE 410
G+G ++ +P ++ P E
Sbjct: 309 GNGEQVKQSVPLPVDQPTE 327
Score = 181 (68.8 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 57/213 (26%), Positives = 89/213 (41%)
Query: 439 GTFG--VLGHGDRISV-STPREVDSLKGL---RTVRAACGVWHTAAVVEVMVGXXXXXXX 492
G +G +L G ++ + E LKGL + ++ ACG H+ A+
Sbjct: 87 GEYGAVLLDDGGKVLIMDKSTECSPLKGLENRQVIQIACGDQHSMALTN----------- 135
Query: 493 XXGKLFTWXXXXXXXXXXXXKEARLV-PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 551
G+LF W ++A P + +L Q+S G + + L+ +G V+
Sbjct: 136 -DGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFG 194
Query: 552 MGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGR 611
G GQLG + V L + + I+CG H A L V+T+G G G+
Sbjct: 195 WGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQ 254
Query: 612 LGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 644
LGH D + P LV L +V + CG + T
Sbjct: 255 LGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHT 287
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 165 (63.1 bits), Expect = 5.0e-20, Sum P(2) = 5.0e-20
Identities = 34/87 (39%), Positives = 52/87 (59%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
P+A+ A L + + G HA L+ + G+VFSWG+ G+LGHG P+L++AL+
Sbjct: 88 PRAL--APELRARRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQ 145
Query: 356 NINVELVACGEHHTCAVTLSGDMYTWG 382
+ V VA G H+ V+ +GD+Y WG
Sbjct: 146 GLPVAEVAAGGWHSVCVSETGDIYIWG 172
Score = 149 (57.5 bits), Expect = 5.0e-20, Sum P(2) = 5.0e-20
Identities = 34/77 (44%), Positives = 44/77 (57%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 461
P L+ PL G V SCG HTAVVT G+L+T+G G +G LGH D S+ P V+
Sbjct: 228 PALLDLPL-GADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYF 286
Query: 462 --KGLRTVRAACGVWHT 476
K L+ +CG W+T
Sbjct: 287 VDKQLQVRAVSCGPWNT 303
Score = 144 (55.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 31/80 (38%), Positives = 46/80 (57%)
Query: 348 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 407
P L+D +V +CG HT VT +G++YTWG +G LGH + SL P ++
Sbjct: 228 PALLDLPLGADVVKASCGSRHTAVVTGTGELYTWGWGK--YGQLGHKDTTSLDRPCRVEY 285
Query: 408 PLEG-IHVSSVSCGPWHTAV 426
++ + V +VSCGPW+T V
Sbjct: 286 FVDKQLQVRAVSCGPWNTYV 305
Score = 137 (53.3 bits), Expect = 9.0e-19, Sum P(2) = 9.0e-19
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 582 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ--VKSIVC 639
V + +CG H AV+T E+YTWG G G+LGH DT + P VE DKQ V+++ C
Sbjct: 239 VVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRAVSC 298
Query: 640 GTSFTAAICLHK 651
G T + K
Sbjct: 299 GPWNTYVYAVEK 310
Score = 124 (48.7 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 420 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
G H ++ AGQ+F++G G G LGHG + PR +++L+GL A G WH+ V
Sbjct: 103 GAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHSVCV 162
Query: 480 VE 481
E
Sbjct: 163 SE 164
Score = 120 (47.3 bits), Expect = 0.00053, P = 0.00052
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL- 354
P ++ + DV +CG RH A+VT GE+++WG G+LGH + + P ++
Sbjct: 228 PALLDLPLGADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFV 287
Query: 355 -KNINVELVACGEHHT 369
K + V V+CG +T
Sbjct: 288 DKQLQVRAVSCGPWNT 303
Score = 96 (38.9 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 25/71 (35%), Positives = 33/71 (46%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNF-VEEIACGD 589
+ SCG T +T TG +YT G YGQLG P RVE + K V ++CG
Sbjct: 241 KASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRAVSCGP 300
Query: 590 YHVAVLTSRTE 600
++ V E
Sbjct: 301 WNTYVYAVEKE 311
Score = 80 (33.2 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
G G H + ++ + P+ +E+ L V +A GG H+ V++ G+++ WG G+
Sbjct: 120 GQGRHGQLGHGSLEAEP-EPRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQ 178
Query: 337 L 337
L
Sbjct: 179 L 179
Score = 48 (22.0 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 455 PREVDSLKGLRTVRAACGVWHTAAV 479
P +D G V+A+CG HTA V
Sbjct: 228 PALLDLPLGADVVKASCGSRHTAVV 252
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 268 (99.4 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 93/314 (29%), Positives = 136/314 (43%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH-HTCAVTLS 375
A VT EVF +G LG G + PK ++AL ++ ++ G H T
Sbjct: 63 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 122
Query: 376 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
G +Y WG + + LG+G P ++ L V V+CG H+ + + G++F
Sbjct: 123 GVVYAWGHNG--YSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 180
Query: 436 FGDGTFGVLGHGDRISVSTPREVDSLKGL-RTVRAACGVWHTAAVVEVMVGXXXXXXXXX 494
+G G +G G + TPR+V + + R V ACG + AV++
Sbjct: 181 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLD------------N 228
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
G+++ W +L P VAAL Q+ CG++ T+ALT G +Y G+
Sbjct: 229 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGA 288
Query: 555 PVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIA-CGDYHV-AVLTSRTEVYTWG--KGAN 609
YGQLG N L P + + K V EIA C H A T VY WG +G +
Sbjct: 289 NTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQS 346
Query: 610 GRLGH----GDTDD 619
L H TDD
Sbjct: 347 VTLPHLTHFSSTDD 360
Score = 256 (95.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 77/288 (26%), Positives = 128/288 (44%)
Query: 273 DGILGGGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACG-GRHAALVTKQGEVFSWG 330
D + G++ S G + VPK +E+ +++++ G G H L T+ G V++WG
Sbjct: 70 DEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWG 129
Query: 331 EELGGRLGHGVDSDVSHPKLIDALKNINVELV---ACGEHHTCAVTLSGDMYTWGGSNCN 387
+LG+G + P I N+ ++ V ACG HH+ A+ G+++ WG +NC
Sbjct: 130 HNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNC- 186
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G +G G+ + P+K+ L V S++CG + V G+++ +G G LG G
Sbjct: 187 -GQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 245
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
+ + TP V +L + + CG HT A+ + G L+ W
Sbjct: 246 NNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD------------EGLLYAWGANTYGQ 293
Query: 508 XXXXXKEARLVPTCVAALVEPNFCQVSCGHSL--TVALTTTGHVYTMG 553
K L P + E +++ HS + A T GHVY G
Sbjct: 294 LGTGNKNNLLSPAHIMVEKE-RVVEIAACHSAHTSAAKTQGGHVYMWG 340
Score = 217 (81.4 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 76/281 (27%), Positives = 120/281 (42%)
Query: 372 VTLSGDMYTWG--GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW-HTAVVT 428
VT + +++ +G SNC LG G+ S +PKKL L G + S+S G H + T
Sbjct: 66 VTDNDEVFVFGLNYSNC----LGTGDNQSTLVPKKLEA-LCGKKIKSLSYGSGPHVLLST 120
Query: 429 SAGQLFTFGDGTFGVLGHGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGXX 487
G ++ +G + LG+G P +V +L + V ACG H+ A+
Sbjct: 121 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALA------- 173
Query: 488 XXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVE-PNFCQVSCGHSLTVALTTT 546
G++F W + P V + ++CG + ++A+
Sbjct: 174 -----ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDN 228
Query: 547 GHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 605
G VY G GQLG N P RV L V +I CG H LT +Y WG
Sbjct: 229 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAA-LHSVCVNQIVCGYAHTLALTDEGLLYAWG 287
Query: 606 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
G+LG G+ ++ P+ + K++ V+ C ++ T+A
Sbjct: 288 ANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSA 328
Score = 195 (73.7 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 62/224 (27%), Positives = 90/224 (40%)
Query: 427 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGX 486
VT ++F FG LG GD S P+++++L G + + G G
Sbjct: 66 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGS-----------GP 114
Query: 487 XXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVP--TCVAALVEPNFCQVSCGHSLTVALT 544
G ++ W + P C L++ +V+CG ++AL
Sbjct: 115 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIK-QVVEVACGSHHSMALA 173
Query: 545 TTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 603
G V+ G GQ+G AN P +V L V IACG + EVY
Sbjct: 174 ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYG 233
Query: 604 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
WG NG+LG G+ ++ P V AL V IVCG + T A+
Sbjct: 234 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLAL 277
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 266 (98.7 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 93/314 (29%), Positives = 136/314 (43%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH-HTCAVTLS 375
A VT EVF +G LG G + PK ++AL ++ ++ G H T
Sbjct: 34 ALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 376 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
G +Y WG + + LG+G P ++ L V V+CG H+ + + G++F
Sbjct: 94 GVVYAWGHNG--YSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151
Query: 436 FGDGTFGVLGHGDRISVSTPREVDSLKGL-RTVRAACGVWHTAAVVEVMVGXXXXXXXXX 494
+G G +G G + TPR+V + + R V ACG + AV++
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLD------------N 199
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
G+++ W +L P VAAL Q+ CG++ T+ALT G +Y G+
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 555 PVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIA-CGDYHV-AVLTSRTEVYTWG--KGAN 609
YGQLG N L P + + K V EIA C H A T VY WG +G +
Sbjct: 260 NTYGQLGTGNKNNLLSPAHI--MVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQS 317
Query: 610 GRLGH----GDTDD 619
L H TDD
Sbjct: 318 VTLPHLTHLSSTDD 331
Score = 250 (93.1 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 76/288 (26%), Positives = 127/288 (44%)
Query: 273 DGILGGGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACG-GRHAALVTKQGEVFSWG 330
D + G++ S G + VPK +E+ +++++ G G H L T+ G V++WG
Sbjct: 41 DEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 331 EELGGRLGHGVDSDVSHPKLIDALKNINVELV---ACGEHHTCAVTLSGDMYTWGGSNCN 387
+LG+G + P I N+ ++ V ACG HH+ A+ G+++ WG +NC
Sbjct: 101 HNGYSQLGNGTTNQGLAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNC- 157
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G +G G+ + P+K+ L V ++CG + V G+++ +G G LG G
Sbjct: 158 -GQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
+ + TP V +L + + CG HT A+ + G L+ W
Sbjct: 217 NNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD------------EGLLYAWGANTYGQ 264
Query: 508 XXXXXKEARLVPTCVAALVEPNFCQVSCGHSL--TVALTTTGHVYTMG 553
K L P + E +++ HS + A T GHVY G
Sbjct: 265 LGTGNKNNLLSPAHIMVEKE-RVIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 210 (79.0 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 74/280 (26%), Positives = 119/280 (42%)
Query: 372 VTLSGDMYTWGGSNCNFG-LLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW-HTAVVTS 429
VT S +++ +G N+ LG G+ S +PKKL L G + S+S G H + T
Sbjct: 37 VTDSDEVFVFG---LNYSSCLGTGDNHSTLVPKKLEA-LCGKKIKSLSYGSGPHVLLSTE 92
Query: 430 AGQLFTFGDGTFGVLGHGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
G ++ +G + LG+G P +V +L + V ACG H+ A+
Sbjct: 93 DGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALA-------- 144
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVE-PNFCQVSCGHSLTVALTTTG 547
G++F W + P V + ++CG + ++A+ G
Sbjct: 145 ----ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 548 HVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 606
VY G GQLG N P RV L V +I CG H LT +Y WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAA-LHSVCVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 607 GANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
G+LG G+ ++ P+ + K++ ++ C ++ T+A
Sbjct: 260 NTYGQLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSA 299
Score = 198 (74.8 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 63/224 (28%), Positives = 91/224 (40%)
Query: 427 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGX 486
VT + ++F FG LG GD S P+++++L G + + G G
Sbjct: 37 VTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGS-----------GP 85
Query: 487 XXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVP--TCVAALVEPNFCQVSCGHSLTVALT 544
G ++ W L P C L++ +V+CG ++AL
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIK-QVVEVACGSHHSMALA 144
Query: 545 TTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 603
G V+ G GQ+G AN P +V L V IACG + EVY
Sbjct: 145 ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYG 204
Query: 604 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
WG NG+LG G+ ++ P V AL V IVCG + T A+
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLAL 248
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 264 (98.0 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 90/302 (29%), Positives = 123/302 (40%)
Query: 378 MYTWGGSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSS------VSCGPWHTAVVTSA 430
+Y WG + G G E L +PK+L L G + +SCG HTA V S
Sbjct: 22 IYVWGYNQS--GQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREHTAAVASD 79
Query: 431 GQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXX 490
G LF +G +G LG G + P++V L+ +CG + TAA+ E
Sbjct: 80 GSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEPRENDGTLS 139
Query: 491 XXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVY 550
+L+ W A T + QVSCG + VAL+ G +
Sbjct: 140 TS---RLWVWGQNQGSNLPRLFSGAFPATTAIR--------QVSCGTAHVVALSEEGLLQ 188
Query: 551 TMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEE---------IACGDYHVAVLTSRTE 600
G GQLG G RV K F++E ++CG+YH A L+ E
Sbjct: 189 AWGYNEQGQLGRGVTCEGLQAPRVINAYAK-FLDEAPELVKIMQLSCGEYHTAALSDAGE 247
Query: 601 VYTWGKGANGRLGHGDT---DDRNFPSLVEALKDKQVKSIVCGTSFTAAI----CLHKWV 653
VYTWG G+ G+LGH D P V L +K + CG T A+ L+ W
Sbjct: 248 VYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGALYAWG 307
Query: 654 SG 655
G
Sbjct: 308 GG 309
Score = 253 (94.1 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 93/362 (25%), Positives = 150/362 (41%)
Query: 309 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHH 368
+I+CG H A V G +F+WG G+LG G + HPK + L++ V+ V+CG
Sbjct: 65 DISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFC 124
Query: 369 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIH-VSSVSCGPWHTAVV 427
T A+ + G+ L G LP+ +G + VSCG H +
Sbjct: 125 TAAIAEPREN---DGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVVAL 181
Query: 428 TSAGQLFTFGDGTFGVLGHGDRIS-VSTPREVDSL-KGL-------RTVRAACGVWHTAA 478
+ G L +G G LG G + PR +++ K L + ++ +CG +HTAA
Sbjct: 182 SEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAA 241
Query: 479 VVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEA---RLVPTCVAALVEPNFCQVSC 535
+ + G+++TW ++ L+P V L + +V+C
Sbjct: 242 LSDA------------GEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVAC 289
Query: 536 GHSLTVALTTTGHVYTMGSPVYGQLG-DPKA-------NGK--LPTRVEGKLTKNFVEEI 585
G T AL+ G +Y G GQLG P++ NG L V + V +
Sbjct: 290 GGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLV 349
Query: 586 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 645
ACG H V + WG + G+ + + +PS V+ QV+ + G +A
Sbjct: 350 ACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVG-QVRKLAAGGGHSA 408
Query: 646 AI 647
+
Sbjct: 409 VL 410
Score = 216 (81.1 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 53/175 (30%), Positives = 94/175 (53%)
Query: 288 GVKMDSFVPKAVESA--VVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD- 344
G S +P+ A ++ ++CG H ++++G + +WG G+LG GV +
Sbjct: 147 GQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEG 206
Query: 345 VSHPKLIDALKN--------INVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGN 395
+ P++I+A + + ++CGE+HT A++ +G++YTWG GS G LGH +
Sbjct: 207 LQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEVYTWGLGS---MGQLGHVS 263
Query: 396 EMS---LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
S +P+++ G L+G+ + V+CG HT ++ G L+ +G G G LG G
Sbjct: 264 LQSGDKELIPRRVVG-LDGVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLG 317
Score = 216 (81.1 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 65/228 (28%), Positives = 107/228 (46%)
Query: 267 WGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 326
WG G LG G+ G A ++++ E+ ++ + ++CG H A ++ GEV
Sbjct: 190 WGY-NEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEV 248
Query: 327 FSWGEELGGRLGH-GVDSDVSH--PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
++WG G+LGH + S P+ + L ++++ VACG HTCA++L G +Y WGG
Sbjct: 249 YTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGALYAWGG 308
Query: 384 SNCN-FGL---------LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 433
GL + +G+EM L L P + V V+CG HT V G++
Sbjct: 309 GQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTD---VRLVACGHSHTLVYMREGRI 365
Query: 434 FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
+G ++G + P VD G + + A G H+A + +
Sbjct: 366 CGWGYNSYGQAANEKSSYAWYPSPVDWCVG-QVRKLAAGGGHSAVLTD 412
Score = 146 (56.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 53/182 (29%), Positives = 85/182 (46%)
Query: 264 VFIWGECTGD-GILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
V+ WG G G LG H S +G K +P+ V + ++ +ACGG H ++
Sbjct: 248 VYTWG--LGSMGQLG---HVS-LQSGDK--ELIPRRVVGLDGVSMKEVACGGVHTCALSL 299
Query: 323 QGEVFSWGEELGGRLGHGVDS----DVSHPKLIDALKNI-------NVELVACGEHHTCA 371
+G +++WG G+LG G S VS+ + L+N+ +V LVACG HT
Sbjct: 300 EGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEM-LLRNVPVLVIPTDVRLVACGHSHTLV 358
Query: 372 VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
G + WG ++ +G + W P ++ + G V ++ G H+AV+T A
Sbjct: 359 YMREGRICGWGYNS--YGQAANEKSSYAWYPSPVDWCV-G-QVRKLAAGGGHSAVLTDAF 414
Query: 432 QL 433
L
Sbjct: 415 SL 416
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 185 (70.2 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 50/172 (29%), Positives = 87/172 (50%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDALKNINVELVAC 364
V +++CG H L+T + ++FS G G+LG + VDS V P +D L NV +
Sbjct: 76 VVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLP--VDTLSKFNVIKIKA 133
Query: 365 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN---EMSLWLPKKLNGPL-----------E 410
G + + A+T +GD+Y WG S +G LG+G ++ + P + PL +
Sbjct: 134 GNNVSAAITEAGDLYCWGSSA--YGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQ 191
Query: 411 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG--HGDRISVSTPREVDS 460
+ +++ G HT +++ G +F++G +G LG H + V P +D+
Sbjct: 192 NLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDN 243
Score = 179 (68.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 34/86 (39%), Positives = 52/86 (60%)
Query: 362 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 421
+ACG H+ +TL GD++ WG SN +G LG G+ + +PK + G LE + ++ ++ G
Sbjct: 275 IACGNFHSALLTLEGDLFLWG-SN-QYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGN 332
Query: 422 WHTAVVTSAGQLFTFGDGTFGVLGHG 447
HT ++T +FTFG F LGHG
Sbjct: 333 NHTILLTKEQDVFTFGSNEFYQLGHG 358
Score = 176 (67.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 43/119 (36%), Positives = 67/119 (56%)
Query: 294 FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID- 352
F K + VV +IACG H+AL+T +G++F WG G+LG G D S PK +
Sbjct: 263 FTAKTIHRIVV----DIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKG 318
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN---EMSLWLPKKLNGP 408
+L+ + + +A G +HT +T D++T+G SN F LGHG+ + L+ P ++ P
Sbjct: 319 SLEFVKINRMALGNNHTILLTKEQDVFTFG-SN-EFYQLGHGSIGGKNRLYFPTQIQKP 375
Score = 163 (62.4 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 62/259 (23%), Positives = 110/259 (42%)
Query: 326 VFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSN 385
+++WG+ G H +D P + L ++N++ ++ G +H+ A+ ++ + WG
Sbjct: 4 LYTWGKGKTGNTCHNIDKKYPSPPSV--LISLNLDQLSMGPNHSAAI-VNNECLMWGE-- 58
Query: 386 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
++G + + K V SVSCG HT ++TS ++F+ G G LG
Sbjct: 59 ----VMGRKHTTLFKIVWKRR-------VVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLG 107
Query: 446 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXX 505
+ + + P VD+L ++ G +AA+ E G L+ W
Sbjct: 108 IENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEA------------GDLYCWGSSAY 155
Query: 506 XXXXXXXKEARL---VPTCVAALVEPN------------FCQVSCGHSLTVALTTTGHVY 550
A+L PT + + P+ + + G T+A++TTG ++
Sbjct: 156 GQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIF 215
Query: 551 TMGSPVYGQLGDPKANGKL 569
+ GS YGQLG N KL
Sbjct: 216 SWGSNQYGQLGLGHCNAKL 234
Score = 139 (54.0 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYH 591
++CG+ + LT G ++ GS YGQLG + + +P V+G L + +A G+ H
Sbjct: 275 IACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNH 334
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTDDRN---FPSLVEALK 630
+LT +V+T+G +LGHG +N FP+ ++ K
Sbjct: 335 TILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQIQKPK 376
Score = 135 (52.6 bits), Expect = 3.2e-14, Sum P(3) = 3.2e-14
Identities = 40/153 (26%), Positives = 73/153 (47%)
Query: 275 ILGGGIHRSGSYAGVK--MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEE 332
I G +++G G++ +DS VP V++ +V I G +A +T+ G+++ WG
Sbjct: 95 IFSMGFNQTGQL-GIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSS 153
Query: 333 LGGRLGHG---------VDSDVSHPKLIDALK------NINVELVACGEHHTCAVTLSGD 377
G+LG+G + + +P + DA K N+ + G HT A++ +G
Sbjct: 154 AYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGA 213
Query: 378 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 410
+++WG + LGH N + +P L+ E
Sbjct: 214 IFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFE 246
Score = 125 (49.1 bits), Expect = 0.00046, Sum P(2) = 0.00045
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 518 VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL----PTRV 573
VP V L + N ++ G++++ A+T G +Y GS YGQLG+ K N KL PT +
Sbjct: 116 VPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTI 175
Query: 574 EGKLTKNFVEE-----------IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF 622
L + ++ I G H +++ +++WG G+LG G + +
Sbjct: 176 LNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLV 235
Query: 623 P 623
P
Sbjct: 236 P 236
Score = 119 (46.9 bits), Expect = 1.9e-17, Sum P(3) = 1.9e-17
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 571 TRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE-AL 629
T K V +IACG++H A+LT +++ WG G+LG GD+ D++ P V+ +L
Sbjct: 261 TDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSL 320
Query: 630 KDKQVKSIVCGTSFT 644
+ ++ + G + T
Sbjct: 321 EFVKINRMALGNNHT 335
Score = 117 (46.2 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 27/68 (39%), Positives = 40/68 (58%)
Query: 412 IH--VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD-SLKGLRTVR 468
IH V ++CG +H+A++T G LF +G +G LG GD + S P+ V SL+ ++ R
Sbjct: 268 IHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINR 327
Query: 469 AACGVWHT 476
A G HT
Sbjct: 328 MALGNNHT 335
Score = 59 (25.8 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 17/73 (23%), Positives = 36/73 (49%)
Query: 736 MNQGFNEAVEHGENFVSRSHVQFGTSMESL--KKVESGSSKRNKKQEFNRTRGLPLPNGV 793
+N G++ + H + + S G + S+ + + S + +N KQE R + N
Sbjct: 1263 INYGYDH-IGHSSSSNNNSTNNLGDYISSISPRAITSTTLTKNPKQEIERELENSVNNS- 1320
Query: 794 SQGNALNNSKSSN 806
+ N++NN+ ++N
Sbjct: 1321 NNNNSINNNSNNN 1333
Score = 41 (19.5 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 13/59 (22%), Positives = 23/59 (38%)
Query: 748 ENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSN 806
EN V+ S+ + S + ++ N N T N + N NN+ ++N
Sbjct: 1314 ENSVNNSNNNNSINNNSNNNNNNNTNNNNNTNNNNNTNNNNNNNNNNNNNNNNNNNNNN 1372
Score = 40 (19.1 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 8/41 (19%), Positives = 17/41 (41%)
Query: 766 KKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSN 806
+++E+ + N N N + N NN+ ++N
Sbjct: 1311 RELENSVNNSNNNNSINNNSNNNNNNNTNNNNNTNNNNNTN 1351
Score = 40 (19.1 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 10/70 (14%), Positives = 25/70 (35%)
Query: 737 NQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQG 796
N N ++ + N + ++ + + + ++ N N N +
Sbjct: 1319 NSNNNNSINNNSNNNNNNNTNNNNNTNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNN 1378
Query: 797 NALNNSKSSN 806
N NN+ ++N
Sbjct: 1379 NNNNNNNNNN 1388
Score = 38 (18.4 bits), Expect = 2.5e-17, Sum P(3) = 2.5e-17
Identities = 12/66 (18%), Positives = 26/66 (39%)
Query: 741 NEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALN 800
N A+ +F S + + + +K++ ++ N N N + N N
Sbjct: 923 NNAINKRLSF-SAEDIHSVKVLSNHRKIKLNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 981
Query: 801 NSKSSN 806
N+ ++N
Sbjct: 982 NNNNNN 987
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 263 (97.6 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 90/350 (25%), Positives = 152/350 (43%)
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLS 375
H+ ++T +G+++SWG G+LGHG + PKLI+ L + ACG +HT A+T +
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTEN 193
Query: 376 GDMYTWGGSNCNFGLLGHGNEMSLWL-PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 434
G +YT+G + G LG GN+ L P + G + V+CG + +V G L+
Sbjct: 194 GTVYTFGENK--LGQLGQGNQTDAVLSPATIQ--YNGQPIVKVACGAEFSMIVDCKGNLY 249
Query: 435 TFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAA--------VV--EVM 483
+FG +G LGH D ++ + ++ L R A + T VV +V
Sbjct: 250 SFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVA 309
Query: 484 VGXXXXXXXXXGK-LFTWXXXXXXXXXXXXKEARLVPTCVAALVEPN--FCQVSCGHSLT 540
G K +F+W ++ +VP V P Q+ CG+ +
Sbjct: 310 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCS 369
Query: 541 VALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 600
AL+ G ++ +G + + P V+ L + +ACG + V +
Sbjct: 370 FALSEMGGLF-----FWGVTNTSRESTMYPKAVQD-LCGWKIRSLACGKSSIIVAADDST 423
Query: 601 VYTWGKGAN-GRLGHGDTDDRNFPSL--VEALKDKQVKSIVCGTSFTAAI 647
+ +WG G LG+GD ++ + V+ L + +V G S + I
Sbjct: 424 I-SWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVI 472
Score = 215 (80.7 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 93/372 (25%), Positives = 156/372 (41%)
Query: 289 VKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVF-SWGEELGGRLGHGVDSDVSH 347
+K++ VPK ++ N GR V KQ F + G+ L G +G SDV
Sbjct: 68 IKLE--VPKVKGQLLIFGATNWDLIGRKE--VPKQQAAFRNLGQNLWGPHRYGCLSDVQV 123
Query: 348 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 407
++ C H + +T G +++WG ++ G LGHG+ L PK + G
Sbjct: 124 SCVVSG---------PCAAH-SLIITTEGKLWSWGRNDK--GQLGHGDTKRLEAPKLIEG 171
Query: 408 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGLRT 466
E + V++ +CG HT +T G ++TFG+ G LG G++ +V +P + G
Sbjct: 172 LGEEVIVAA-ACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPI 229
Query: 467 VRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXK-EARLVPTCVAAL 525
V+ ACG + +V+ G+L + + L+P VA
Sbjct: 230 VKVACGA-EFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIF 288
Query: 526 VE----------PNFC--QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV 573
+E PN V+CG + T+ L + V++ G YG+LG + ++ R+
Sbjct: 289 IEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRL 348
Query: 574 EGKLTK---NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 630
KL +I CG L+ ++ WG R + +P V+ L
Sbjct: 349 V-KLFDFPGRGATQIYCGYQCSFALSEMGGLFFWGVTNTSR------ESTMYPKAVQDLC 401
Query: 631 DKQVKSIVCGTS 642
+++S+ CG S
Sbjct: 402 GWKIRSLACGKS 413
Score = 177 (67.4 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 50/177 (28%), Positives = 86/177 (48%)
Query: 308 QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK--NINVELVACG 365
+++ACG H ++ Q VFSWG GRLGH D P+L+ + CG
Sbjct: 306 RDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCG 365
Query: 366 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 425
+ A++ G ++ WG +N + E +++ PK + L G + S++CG +
Sbjct: 366 YQCSFALSEMGGLFFWGVTNTS-------RESTMY-PKAVQD-LCGWKIRSLACGK-SSI 415
Query: 426 VVTSAGQLFTFGDG-TFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACGVWHTAAV 479
+V + ++G TFG LG+GD S +T +EV +L G+ + + G H+ +
Sbjct: 416 IVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVI 472
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 263 (97.6 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 87/295 (29%), Positives = 129/295 (43%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH-HTCAVTLS 375
A VT EVF +G LG G + PK ++AL ++ ++ G H T
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 376 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
G +Y WG + + LG+G P ++ L V V+CG H+ + + G++F
Sbjct: 94 GVVYAWGHNG--YSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151
Query: 436 FGDGTFGVLGHGDRISVSTPREVDSLKGL-RTVRAACGVWHTAAVVEVMVGXXXXXXXXX 494
+G G +G G + TPR+V + + R V ACG + AV++
Sbjct: 152 WGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLD------------N 199
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
G+++ W +L P VAAL Q+ CG++ T+ALT G +Y G+
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 555 PVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIA-CGDYHV-AVLTSRTEVYTWGK 606
YGQLG N L P + + K V EIA C H A T VY WG+
Sbjct: 260 NTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 252 (93.8 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 76/288 (26%), Positives = 127/288 (44%)
Query: 273 DGILGGGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACG-GRHAALVTKQGEVFSWG 330
D + G++ S G + VPK +E+ +++++ G G H L T+ G V++WG
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 331 EELGGRLGHGVDSDVSHPKLIDALKNINVELV---ACGEHHTCAVTLSGDMYTWGGSNCN 387
+LG+G + P I N+ ++ V ACG HH+ A+ G+++ WG +NC
Sbjct: 101 HNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNC- 157
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G +G G+ + P+K+ L V ++CG + V G+++ +G G LG G
Sbjct: 158 -GQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
+ + TP V +L + + CG HT A+ + G L+ W
Sbjct: 217 NNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD------------EGLLYAWGANTYGQ 264
Query: 508 XXXXXKEARLVPTCVAALVEPNFCQVSCGHSL--TVALTTTGHVYTMG 553
K L P + E +++ HS + A T GHVY G
Sbjct: 265 LGTGNKNNLLSPAHIMVEKE-RVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 215 (80.7 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 76/281 (27%), Positives = 120/281 (42%)
Query: 372 VTLSGDMYTWG--GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW-HTAVVT 428
VT + +++ +G SNC LG G+ S +PKKL L G + S+S G H + T
Sbjct: 37 VTDNDEVFVFGLNYSNC----LGTGDNQSTLVPKKLEA-LCGKKIKSLSYGSGPHVLLST 91
Query: 429 SAGQLFTFGDGTFGVLGHGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGXX 487
G ++ +G + LG+G P +V +L + V ACG H+ A+
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALA------- 144
Query: 488 XXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVE-PNFCQVSCGHSLTVALTTT 546
G++F W + P V + ++CG + ++A+
Sbjct: 145 -----ADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDN 199
Query: 547 GHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 605
G VY G GQLG N P RV L V +I CG H LT +Y WG
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAA-LHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 606 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
G+LG G+ ++ P+ + K++ V+ C ++ T+A
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSA 299
Score = 195 (73.7 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 56/180 (31%), Positives = 85/180 (47%)
Query: 273 DG-ILGGGIHRSGSY-AGVKMDSFVPKAVESAV-VLDVQNIACGGRHAALVTKQGEVFSW 329
DG + G + G +G + P+ V + + + V IACG + V GEV+ W
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205
Query: 330 GEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFG 389
G G+LG G + + P + AL ++ V + CG HT A+T G +Y WG + +G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANT--YG 263
Query: 390 LLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGD--GTFGVLGH 446
LG GN+ +L P + E + V +C HT A T G ++ +G G VL H
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVLPH 322
Score = 189 (71.6 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 61/224 (27%), Positives = 89/224 (39%)
Query: 427 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGX 486
VT ++F FG LG GD S P+++++L G + + G G
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGS-----------GP 85
Query: 487 XXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVP--TCVAALVEPNFCQVSCGHSLTVALT 544
G ++ W + P C L++ +V+CG ++AL
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIK-QVVEVACGSHHSMALA 144
Query: 545 TTGHVYTMGSPVYGQLGDPKA-NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 603
G V+ G GQ+G N P +V L V IACG + EVY
Sbjct: 145 ADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYG 204
Query: 604 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
WG NG+LG G+ ++ P V AL V IVCG + T A+
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLAL 248
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 171 (65.3 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 50/157 (31%), Positives = 78/157 (49%)
Query: 302 AVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINV 359
A + D +I+ GG H ++TK G+++S+G G LG D S P LID L
Sbjct: 71 AGIPDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPG-KA 128
Query: 360 ELVACGEHHTCAVTLSGDMYTWGG---SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS 416
++ G+ H+ + G ++ WG S+ N GL GN+ + P L +EG S
Sbjct: 129 LCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRT---PIDL---MEGTVCCS 182
Query: 417 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 453
++ G H ++T+AG++FT G G LG S+S
Sbjct: 183 IASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSIS 219
Score = 167 (63.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 89/359 (24%), Positives = 145/359 (40%)
Query: 321 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVEL-VACGEHHTCAVTLSGDMY 379
T G V G G+LG G D+ K + + I + ++ G H +T SGD+Y
Sbjct: 39 TVLGNVLVCGNGDVGQLGLG--EDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIY 96
Query: 380 TWGGSNCNF-GLLGH--GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
++G CN G LG + S P ++ P + + +S G H+A + G++F +
Sbjct: 97 SFG---CNDEGALGRDTSEDGSESKPDLIDLPGKAL---CISAGDSHSACLLEDGRVFAW 150
Query: 437 GD-----GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXX 491
G G G+ G++ TP +D ++G A G H V+ G
Sbjct: 151 GSFRDSHGNMGLTIDGNK---RTP--IDLMEGTVCCSIASGADHL--VILTTAGKVFTVG 203
Query: 492 -XXXGKLFTWXXXXXXXXXXXXKEARLVPT-CVAALVEPNFCQVSCGHSLTVALTTTGHV 549
G+L K L PT + +P + + + + T +
Sbjct: 204 CAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVI 263
Query: 550 YTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN 609
+ G + QL + GK K + IA G +H +LT+ + G+
Sbjct: 264 WATGLNNFKQLAH-ETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEY 322
Query: 610 GRLGHGDTDDR-NFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSG 663
GRLG GD D P++V+ L +K V S+ CG + A+ L+ W SGV+ + G
Sbjct: 323 GRLGLGDVKDVVEKPTIVKKLTEKIV-SVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVG 380
Score = 143 (55.4 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 40/108 (37%), Positives = 59/108 (54%)
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDY 590
++ G TV LTT +G P YG+LG D K + PT V+ KLT+ V + CG+
Sbjct: 298 IAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVK-KLTEKIVS-VGCGEV 355
Query: 591 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 638
+T ++Y+WG G N +LG GD DD P +V + K+ Q K ++
Sbjct: 356 CSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVS-KNTQGKHML 402
Score = 100 (40.3 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 36/138 (26%), Positives = 62/138 (44%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
++ +G C +G LG GS + + KA+ I+ G H+A + +
Sbjct: 95 IYSFG-CNDEGALGRDTSEDGSESKPDLIDLPGKAL---------CISAGDSHSACLLED 144
Query: 324 GEVFSWGE--ELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 381
G VF+WG + G +G +D + P ID ++ +A G H +T +G ++T
Sbjct: 145 GRVFAWGSFRDSHGNMGLTIDGNKRTP--IDLMEGTVCCSIASGADHLVILTTAGKVFTV 202
Query: 382 GGSNCNFGLLGHGNEMSL 399
G + G LG +E S+
Sbjct: 203 GCAEQ--GQLGRLSERSI 218
Score = 39 (18.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 113 VWFTGLKALISRSHYRKGR 131
+W TGL +H KG+
Sbjct: 263 IWATGLNNFKQLAHETKGK 281
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 260 (96.6 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 86/295 (29%), Positives = 128/295 (43%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH-HTCAVTLS 375
A VT EVF +G LG G + PK ++ L ++ ++ G H T
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTED 93
Query: 376 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
G +Y WG + + LG+G P ++ L V V+CG H+ + + G++F
Sbjct: 94 GVVYAWGHNG--YSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151
Query: 436 FGDGTFGVLGHGDRISVSTPREVDSLKGL-RTVRAACGVWHTAAVVEVMVGXXXXXXXXX 494
+G G +G G + TPR+V + + R V ACG + AV++
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLD------------N 199
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
G+++ W +L P VAAL Q+ CG++ T+ALT G +Y G+
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 555 PVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIA-CGDYHV-AVLTSRTEVYTWGK 606
YGQLG N L P + + K V EIA C H A T VY WG+
Sbjct: 260 NTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 250 (93.1 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 77/288 (26%), Positives = 127/288 (44%)
Query: 273 DGILGGGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACG-GRHAALVTKQGEVFSWG 330
D + G++ S G + VPK +E +++++ G G H L T+ G V++WG
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 331 EELGGRLGHGVDSDVSHPKLIDA---LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN 387
+LG+G + P + +K + VE VACG HH+ A+ G+++ WG +NC
Sbjct: 101 HNGYSQLGNGTTNQGIAPVQVCTNLLIKQV-VE-VACGSHHSMALAADGEVFAWGYNNC- 157
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 447
G +G G+ + P+K+ L V ++CG + V G+++ +G G LG G
Sbjct: 158 -GQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
Query: 448 DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX 507
+ + TP V +L + + CG HT A+ + G L+ W
Sbjct: 217 NNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD------------EGLLYAWGANTYGQ 264
Query: 508 XXXXXKEARLVPTCVAALVEPNFCQVSCGHSL--TVALTTTGHVYTMG 553
K L P + E +++ HS + A T GHVY G
Sbjct: 265 LGTGNKNNLLSPAHIMVEKE-RVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 221 (82.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 77/281 (27%), Positives = 121/281 (43%)
Query: 372 VTLSGDMYTWG--GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW-HTAVVT 428
VT + +++ +G SNC LG G+ S +PKKL G L G + S+S G H + T
Sbjct: 37 VTDNDEVFVFGLNYSNC----LGTGDNQSTLVPKKLEG-LCGKKIKSLSYGSGPHVLLST 91
Query: 429 SAGQLFTFGDGTFGVLGHGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGXX 487
G ++ +G + LG+G P +V +L + V ACG H+ A+
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALA------- 144
Query: 488 XXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVE-PNFCQVSCGHSLTVALTTT 546
G++F W + P V + ++CG + ++A+
Sbjct: 145 -----ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDN 199
Query: 547 GHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 605
G VY G GQLG N P RV L V +I CG H LT +Y WG
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAA-LHSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 606 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
G+LG G+ ++ P+ + K++ V+ C ++ T+A
Sbjct: 259 ANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSA 299
Score = 194 (73.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 55/180 (30%), Positives = 85/180 (47%)
Query: 273 DG-ILGGGIHRSGSY-AGVKMDSFVPKAVESAV-VLDVQNIACGGRHAALVTKQGEVFSW 329
DG + G + G +G + P+ V + + + V IACG + V GEV+ W
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205
Query: 330 GEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFG 389
G G+LG G + + P + AL ++ V + CG HT A+T G +Y WG + +G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANT--YG 263
Query: 390 LLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGD--GTFGVLGH 446
LG GN+ +L P + E + V +C HT A T G ++ +G G +L H
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPH 322
Score = 192 (72.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 62/224 (27%), Positives = 89/224 (39%)
Query: 427 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGX 486
VT ++F FG LG GD S P++++ L G + + G G
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGS-----------GP 85
Query: 487 XXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPT--CVAALVEPNFCQVSCGHSLTVALT 544
G ++ W + P C L++ +V+CG ++AL
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIK-QVVEVACGSHHSMALA 144
Query: 545 TTGHVYTMGSPVYGQLGDPK-ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 603
G V+ G GQ+G AN P +V L V IACG + EVY
Sbjct: 145 ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYG 204
Query: 604 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
WG NG+LG G+ ++ P V AL V IVCG + T A+
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLAL 248
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 265 (98.3 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 64/193 (33%), Positives = 99/193 (51%)
Query: 291 MD-SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG-HGVDSDVSHP 348
MD S V + ++S V IACG +H+ ++ G++F WGE G+LG + P
Sbjct: 100 MDQSTVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSP 159
Query: 349 KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 408
+ + +L I V ++ G +H+ ++LSG ++ WG ++ G LG G+ ++P +
Sbjct: 160 QHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSA--GQLGLGDTKDRFVPTIVKS- 216
Query: 409 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 468
L G S+SCG HTA ++ G +FTFG G FG LGH PR + L G + +
Sbjct: 217 LCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQ 276
Query: 469 AACGVWHTAAVVE 481
CG HT E
Sbjct: 277 VTCGRHHTLVFEE 289
Score = 248 (92.4 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 63/196 (32%), Positives = 100/196 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
+F+WGE T G LG ++G+ + P+ ++S + V I+ GG H+ +++
Sbjct: 136 LFVWGENT-HGQLGLRKEQAGTQS--------PQHLQSLCEIPVAQISAGGNHSFVLSLS 186
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G VF WG G+LG G D P ++ +L ++CG HT ++ G ++T+G
Sbjct: 187 GVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGS 246
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL-FTFGDGTFG 442
FG LGH + P+ L L G VS V+CG HT V + +L ++FG G G
Sbjct: 247 GG--FGQLGHNSLKDEHHPR-LIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQG 303
Query: 443 VLGHGDRISVSTPREV 458
LG+G+++ S P V
Sbjct: 304 QLGNGEQVKQSVPLPV 319
Score = 227 (85.0 bits), Expect = 9.0e-15, P = 9.0e-15
Identities = 58/217 (26%), Positives = 100/217 (46%)
Query: 409 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRISVSTPREVDSLKGLRTV 467
LE V ++CG H+ +++ GQLF +G+ T G LG ++ +P+ + SL +
Sbjct: 112 LENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVA 171
Query: 468 RAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVE 527
+ + G H+ + G +F W + R VPT V +L
Sbjct: 172 QISAGGNHSFVL------------SLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCG 219
Query: 528 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC 587
+SCG T L+ G V+T GS +GQLG + R+ +L + V ++ C
Sbjct: 220 KKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTC 279
Query: 588 GDYHVAVLTSRTE-VYTWGKGANGRLGHGDTDDRNFP 623
G +H V ++ +Y++G G G+LG+G+ ++ P
Sbjct: 280 GRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVP 316
Score = 217 (81.4 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 72/254 (28%), Positives = 118/254 (46%)
Query: 343 SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWL 401
S V P + +L+N V +ACG+ H+ A++ G ++ WG N + G LG E +
Sbjct: 103 STVCRP--LKSLENRQVIQIACGDQHSMALSNDGQLFVWG-ENTH-GQLGLRKEQAGTQS 158
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 461
P+ L E I V+ +S G H+ V++ +G +F +G + G LG GD P V SL
Sbjct: 159 PQHLQSLCE-IPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSL 217
Query: 462 KGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTC 521
G +TV +CG HTA + + G +FT+ + P
Sbjct: 218 CGKKTVSISCGGEHTATLSK------------GGTVFTFGSGGFGQLGHNSLKDEHHPRL 265
Query: 522 VAALVEPNFCQVSCGHSLTVALTTTGH-VYTMGSPVYGQLGDP---KANGKLPTRVEGKL 577
+A L QV+CG T+ + +Y+ G + GQLG+ K + LP + +
Sbjct: 266 IAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTEC 325
Query: 578 TKNFVEEIACGDYH 591
T+ +E++ G++H
Sbjct: 326 TEFTMEKLITGEHH 339
Score = 191 (72.3 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 49/139 (35%), Positives = 69/139 (49%)
Query: 275 ILGGGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 333
+ G G + +G G D FVP V+S +I+CGG H A ++K G VF++G
Sbjct: 189 VFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGG 248
Query: 334 GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDM-YTWGGSNCNF-GLL 391
G+LGH D HP+LI L V V CG HHT S + Y++G C G L
Sbjct: 249 FGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFG---CGMQGQL 305
Query: 392 GHGNEMSLWLPKKLNGPLE 410
G+G ++ +P + P E
Sbjct: 306 GNGEQVKQSVPLPVLLPTE 324
Score = 191 (72.3 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 64/222 (28%), Positives = 99/222 (44%)
Query: 426 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 485
V AG + DG ++ D+ +V P + SL+ + ++ ACG H+ A+
Sbjct: 82 VCGEAGAVLLADDGKVLIM---DQSTVCRP--LKSLENRQVIQIACGDQHSMAL------ 130
Query: 486 XXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLV-PTCVAALVEPNFCQVSCGHSLTVALT 544
G+LF W ++A P + +L E Q+S G + + L+
Sbjct: 131 ------SNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLS 184
Query: 545 TTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 602
+G V+ GS GQLG D K + +PT V+ K V I+CG H A L+ V+
Sbjct: 185 LSGVVFGWGSNSAGQLGLGDTK-DRFVPTIVKSLCGKKTVS-ISCGGEHTATLSKGGTVF 242
Query: 603 TWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 644
T+G G G+LGH D + P L+ L +V + CG T
Sbjct: 243 TFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHT 284
Score = 180 (68.4 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 55/174 (31%), Positives = 86/174 (49%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
+++I CG A L+ G+V + S V P + +L+N V +ACG+
Sbjct: 78 IRSIVCGEAGAVLLADDGKVLIMDQ-----------STVCRP--LKSLENRQVIQIACGD 124
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEGIHVSSVSCGPWHTA 425
H+ A++ G ++ WG N + G LG E + P+ L E I V+ +S G H+
Sbjct: 125 QHSMALSNDGQLFVWG-ENTH-GQLGLRKEQAGTQSPQHLQSLCE-IPVAQISAGGNHSF 181
Query: 426 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
V++ +G +F +G + G LG GD P V SL G +TV +CG HTA +
Sbjct: 182 VLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATL 235
Score = 178 (67.7 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 42/118 (35%), Positives = 66/118 (55%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK--ANGKLPTRVEGKLTKNFVEEIACGD 589
Q++CG ++AL+ G ++ G +GQLG K A + P ++ L + V +I+ G
Sbjct: 119 QIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQS-LCEIPVAQISAGG 177
Query: 590 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
H VL+ V+ WG + G+LG GDT DR P++V++L K+ SI CG TA +
Sbjct: 178 NHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATL 235
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 258 (95.9 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 95/360 (26%), Positives = 150/360 (41%)
Query: 279 GIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
G + SG G D + V S + + A G L++ G+V++ G+E G
Sbjct: 168 GYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYACGKESFGEA 227
Query: 338 GHGVDSD--VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT--WGGSNCNFGLLGH 393
+G V+ P+L+ +LKNI V A G + T ++ G +YT WG N G LGH
Sbjct: 228 EYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWG----NDGRLGH 283
Query: 394 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT---SAGQLFTFGDGTFGVLGHGDRI 450
E + P+ L GPLE + V ++ G + + + +++ G G G LGHG R
Sbjct: 284 QTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRT 343
Query: 451 SVSTPREVDSLK--GLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXX 508
PR ++ + L+ A G WH A V + G++ TW
Sbjct: 344 DEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQ------------DGRVCTWGWGRYGCL 391
Query: 509 XXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS---------PVYGQ 559
+E VP V L V+ G T ++ G VY+ G P + +
Sbjct: 392 GHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDE 451
Query: 560 LGDPKANGKLPTRVEG--KLTKNFVE-EIACGDY---HVAVLTSRTEVYTWGKGANGRLG 613
G+ AN PT V ++ + V+ + Y H LT +++ +G G G+LG
Sbjct: 452 QGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLG 511
Score = 229 (85.7 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 93/354 (26%), Positives = 153/354 (43%)
Query: 308 QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEH 367
Q +A G H+ VT +GEV+++G G+LGHG D + + + +L+ + + A G
Sbjct: 147 QAVA-GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAA 205
Query: 368 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS--LWLPKKLNGPLEGIHVSSVSCGPWHTA 425
T ++ G +Y G + FG +G + + + P+ + L+ I V + G + TA
Sbjct: 206 RTMLISDDGKVYACGKES--FGEAEYGGQGTKPVTTPQLVTS-LKNIFVVQAAIGNYFTA 262
Query: 426 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAVVEVMV 484
V++ G+++TF G G LGH + PR + L+ + V+ A G + A+
Sbjct: 263 VLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPN 322
Query: 485 GXXXXXXX--XXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVA 542
G GKL K R++ ++P H+ V
Sbjct: 323 GMSVYSVGCGLGGKL-------GHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVG 375
Query: 543 LTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 601
G V T G YG LG + +P VEG L+ +A GDY V++ +V
Sbjct: 376 --QDGRVCTWGWGRYGCLGHGNEECESVPKVVEG-LSHVKAVHVATGDYTTFVVSDDGDV 432
Query: 602 YTWGKGANGRLGHGDTDDRN--------FPSLVEALKDKQVKSIVCGTSFTAAI 647
Y++G G + LGH + D P++V +LK QV + S T +I
Sbjct: 433 YSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLK--QVNERMVQISLTNSI 484
Score = 202 (76.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 71/254 (27%), Positives = 108/254 (42%)
Query: 415 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 474
S GP H+ VTS G+++TFG G LGHG + + V SL+G+R ++AA G
Sbjct: 146 SQAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAA 205
Query: 475 HTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLV--PTCVAALVEPNFCQ 532
T + + GK++ + + V P V +L Q
Sbjct: 206 RTMLISD------------DGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQ 253
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYH 591
+ G+ T L+ G VYT G+LG +A P + G L V +IA G +
Sbjct: 254 AAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCY 313
Query: 592 VAVLTSRTE---VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 648
+ L + VY+ G G G+LGHG D +P ++E + ++ V AA
Sbjct: 314 LLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRV-----VAAGA 368
Query: 649 LHKWVSGVDQSMCS 662
H V G D +C+
Sbjct: 369 WHAAVVGQDGRVCT 382
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 238 (88.8 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 94/352 (26%), Positives = 146/352 (41%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN-INVELVACGEHHTCAVTLS 375
A + ++ EV+ WG GG+ S P+ +D +K+ + V G H VT+
Sbjct: 338 AVVTSRTSEVYVWG---GGK---------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 385
Query: 376 GDMYTW----GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
++YTW GG+ + G LGHG++ S PK + L+G + VSCG T VT G
Sbjct: 386 KELYTWVNMQGGTKLH-GQLGHGDKASYRQPKHVE-KLQGKAIHQVSCGDDFTVCVTDEG 443
Query: 432 QLFTFGDGTFGVLGHGDRIS---VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
QL+ FG +G +G D++S V P +++ + +CG H +
Sbjct: 444 QLYAFGSDYYGCMGV-DKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTR------- 495
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 548
++++W +E P V V CG T LT +G
Sbjct: 496 -----NKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGK 550
Query: 549 VYTMGSPVYGQLG---------DPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAVL 595
V G + +LG + +A ++P L K + IA G H A +
Sbjct: 551 VLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAI 610
Query: 596 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA-LKDKQVKSIVCGTSFTAA 646
R + T+G G+LG G+ R +L+ L KQV + CG FT A
Sbjct: 611 DERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 662
Score = 211 (79.3 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 54/172 (31%), Positives = 84/172 (48%)
Query: 308 QNIACGGRHAALVTKQGEVFSW-----GEELGGRLGHGVDSDVSHPKLIDALKNINVELV 362
+ + G H A+VT + E+++W G +L G+LGHG + PK ++ L+ + V
Sbjct: 370 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQV 429
Query: 363 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS--LWLPKKLNGPLEGIHVSSVSCG 420
+CG+ T VT G +Y +G +G +G + P +LN L V VSCG
Sbjct: 430 SCGDDFTVCVTDEGQLYAFGSDY--YGCMGVDKVSGPEVLEPMQLNFFLSN-PVEQVSCG 486
Query: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
H V+T +++++G G +G LG TP+ VD K L V CG
Sbjct: 487 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCG 538
Score = 204 (76.9 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 80/338 (23%), Positives = 145/338 (42%)
Query: 278 GGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GG G G K PK VE + ++CG VT +G+++++G + G
Sbjct: 396 GGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGC 455
Query: 337 LGHGVDSDVSHPKLIDALK-NI---N-VELVACGEHHTCAVTLSGDMYTWGGSNCN-FGL 390
+G VD VS P++++ ++ N N VE V+CG++H +T + ++Y+WG C +G
Sbjct: 456 MG--VDK-VSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWG---CGEYGR 509
Query: 391 LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 450
LG +E + P++++ P + + + +V CG T ++T +G++ G F LG +
Sbjct: 510 LGLDSEEDYYTPQRVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCM 568
Query: 451 SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXX-GKLFTWXXXXXXXXX 509
S E T + + G G+L T+
Sbjct: 569 SGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 628
Query: 510 XXXKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DP--KA 565
+ RL + L +VSCG T+A T H++ G+ G+L P +
Sbjct: 629 VGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERP 688
Query: 566 NGK-----LPTRVEGKLTKNFVEEIACGDYHVAVLTSR 598
+G P + G L + V +++C +H ++ +
Sbjct: 689 HGSDICTSWPRPIFGSL--HHVPDLSCRGWHTILIVEK 724
Score = 184 (69.8 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 66/237 (27%), Positives = 100/237 (42%)
Query: 284 GSYAGVKMDS----FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG----EELG- 334
G Y + +DS + P+ V+ L + + CG L+T+ G+V + G +LG
Sbjct: 505 GEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGL 564
Query: 335 -----GRLGHGVDSDVSHPKLIDALKNIN---VELVACGEHHTCAVTLSGDMYTWGGSNC 386
G + H +V + K ++ + +A G+ HT A+ G + T+G + C
Sbjct: 565 NQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKC 624
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG- 445
G LG GN L GPL G V VSCG T T +F +G+G G L
Sbjct: 625 --GQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM 682
Query: 446 ------HGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXG 495
HG I S PR + SL + + +C WHT +VE ++ G
Sbjct: 683 TPTERPHGSDICTSWPRPIFGSLHHVPDL--SCRGWHTILIVEKVLNSKTIRSNSSG 737
Score = 146 (56.5 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 72/267 (26%), Positives = 109/267 (40%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD---GT--FGVLGHGDRISVSTPR 456
P+KL+ G V G H AVVT +L+T+ + GT G LGHGD+ S P+
Sbjct: 357 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 416
Query: 457 EVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEAR 516
V+ L+G + +CG T V + G+L+ +
Sbjct: 417 HVEKLQGKAIHQVSCGDDFTVCVTD------------EGQLYAFGSDYYGCMGVDKVSGP 464
Query: 517 --LVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRV 573
L P + + QVSCG + V LT VY+ G YG+LG D + + P RV
Sbjct: 465 EVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRV 524
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG-----HGDTDDRNF---P-- 623
+ V + CG +LT +V G +LG G + + P
Sbjct: 525 DVPKALIIVA-VQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYT 583
Query: 624 ---SLVEALKDKQVKSIVCGTSFTAAI 647
+L + L ++++I G + TAAI
Sbjct: 584 TSFTLAKQLSFYKIRTIAPGKTHTAAI 610
Score = 105 (42.0 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 26/87 (29%), Positives = 38/87 (43%)
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV-EGKLTKNFVEEIACGDYH 591
++ G + T A+ G + T G GQLG +L + G L V ++CGD
Sbjct: 600 IAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEF 659
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTD 618
T ++ WG G NGRL T+
Sbjct: 660 TIAATDDNHIFAWGNGGNGRLAMTPTE 686
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 270 (100.1 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 60/175 (34%), Positives = 93/175 (53%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVACG 365
V IACG +H+ ++ G++F WGE G+LG + + P+ + +L I V ++ G
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAG 179
Query: 366 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 425
+H+ ++LSG ++ WG ++ G LG G+ ++P + L G S+SCG HTA
Sbjct: 180 GNHSFVLSLSGVVFGWGSNSA--GQLGLGDTTDRFVPTIVKS-LSGKKTVSISCGGEHTA 236
Query: 426 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
++ G +FTFG G FG LGH PR V L G + + CG HT +V
Sbjct: 237 TLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLV 291
Score = 248 (92.4 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 78/299 (26%), Positives = 131/299 (43%)
Query: 390 LLGHGNEMSLWLPKKLNGPLEGIH---VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG- 445
LL G ++ L + PL+G+ V ++CG H+ +++ GQLF +G+ G LG
Sbjct: 93 LLADGGKVLLMDKYTVCRPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGL 152
Query: 446 HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXX 505
++ + +P+ + SL G+ + + G H+ + G +F W
Sbjct: 153 RKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVL------------SLSGVVFGWGSNSA 200
Query: 506 XXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKA 565
R VPT V +L +SCG T L+ G V+T GS +GQLG
Sbjct: 201 GQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSL 260
Query: 566 NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE-VYTWGKGANGRLGHGDTDDRNFPS 624
+ R+ +L + V ++ CG +H VL + T +Y++G G G+LG+G+ ++ P
Sbjct: 261 KDEHHPRLVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPL 320
Query: 625 LVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLV 683
V D C FT + K ++G S + P N K + N G++
Sbjct: 321 PVLLPTD-------CNCEFT----MEKIIAGEKHSFALFFKNPGNESTKPKSSMNGGIL 368
Score = 243 (90.6 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 61/196 (31%), Positives = 101/196 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
+F+WGE G LG + + + + S P+ ++S + V I+ GG H+ +++
Sbjct: 139 LFVWGE-NAHGQLG--LRKEQAL----IQS--PQHLQSLCGIPVAQISAGGNHSFVLSLS 189
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G VF WG G+LG G +D P ++ +L ++CG HT ++ G ++T+G
Sbjct: 190 GVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGS 249
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS-AGQLFTFGDGTFG 442
FG LGH + P+ L L G VS V+CG HT V+ + ++++FG G G
Sbjct: 250 GG--FGQLGHNSLKDEHHPR-LVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQG 306
Query: 443 VLGHGDRISVSTPREV 458
LG+G+++ S P V
Sbjct: 307 QLGNGEQVKQSVPLPV 322
Score = 234 (87.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 75/247 (30%), Positives = 113/247 (45%)
Query: 351 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPL 409
+ L N V +ACG+ H+ A++ G ++ WG N + G LG E +L P+ L L
Sbjct: 112 LKGLDNTKVIQIACGDQHSVALSNDGQLFVWG-ENAH-GQLGLRKEQALIQSPQHLQS-L 168
Query: 410 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRA 469
GI V+ +S G H+ V++ +G +F +G + G LG GD P V SL G +TV
Sbjct: 169 CGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSI 228
Query: 470 ACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPN 529
+CG HTA + + G +FT+ + P VA L
Sbjct: 229 SCGGEHTATLSK------------GGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSK 276
Query: 530 FCQVSCG-HSLTVALTTTGHVYTMGSPVYGQLGDP---KANGKLPTRVEGKLTKNF-VEE 584
QV+CG H V + T +Y+ G + GQLG+ K + LP + F +E+
Sbjct: 277 VSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTDCNCEFTMEK 336
Query: 585 IACGDYH 591
I G+ H
Sbjct: 337 IIAGEKH 343
Score = 44 (20.5 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 690 SKKSVKASM--APNPNKPYRVCDNCFGKL 716
SK+ +K S P+P+ CFG+L
Sbjct: 929 SKRRIKISTRDCPDPDDHLPKAQTCFGRL 957
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 269 (99.8 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 62/181 (34%), Positives = 95/181 (52%)
Query: 297 KAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG-HGVDSDVSHPKLIDALK 355
K +E+ V+ IACG +H+ +T G++F WGE G+LG + P+ + +L
Sbjct: 111 KGLENRQVIQ---IACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLC 167
Query: 356 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVS 415
I V ++ G +H+ ++LSG ++ WG ++ G LG G+ ++P + L G
Sbjct: 168 GIPVAQISAGGNHSFVLSLSGVVFGWGSNSA--GQLGLGDTTDRFIPTIVKS-LSGKKTV 224
Query: 416 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWH 475
S+SCG HTA ++ G +FTFG G FG LGH PR V L G + + CG H
Sbjct: 225 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHH 284
Query: 476 T 476
T
Sbjct: 285 T 285
Score = 252 (93.8 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 63/196 (32%), Positives = 101/196 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
+F+WGE G LG ++G+ + P+ ++S + V I+ GG H+ +++
Sbjct: 137 LFVWGE-NALGQLGLRKEQAGTQS--------PQHLQSLCGIPVAQISAGGNHSFVLSLS 187
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G VF WG G+LG G +D P ++ +L ++CG HT ++ G ++T+G
Sbjct: 188 GVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGS 247
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT-SAGQLFTFGDGTFG 442
FG LGH + P+ L L G VS V+CG HT V S+ Q+++FG G G
Sbjct: 248 GG--FGQLGHNSLKDEHHPR-LVAELWGSKVSQVTCGRHHTLVFEDSSNQIYSFGCGMQG 304
Query: 443 VLGHGDRISVSTPREV 458
LG+G+++ S P V
Sbjct: 305 QLGNGEQVKQSVPLPV 320
Score = 241 (89.9 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 74/283 (26%), Positives = 125/283 (44%)
Query: 403 KKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRISVSTPREVDSL 461
+ L G LE V ++CG H+ +T+ GQLF +G+ G LG ++ +P+ + SL
Sbjct: 108 RPLKG-LENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSL 166
Query: 462 KGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTC 521
G+ + + G H+ + G +F W R +PT
Sbjct: 167 CGIPVAQISAGGNHSFVL------------SLSGVVFGWGSNSAGQLGLGDTTDRFIPTI 214
Query: 522 VAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF 581
V +L +SCG T L+ G V+T GS +GQLG + R+ +L +
Sbjct: 215 VKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSK 274
Query: 582 VEEIACGDYHVAVLT-SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 640
V ++ CG +H V S ++Y++G G G+LG+G+ ++ P + L + C
Sbjct: 275 VSQVTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQSVP--LPVLLPTE-----C- 326
Query: 641 TSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLV 683
T FT + K ++G + S + P N K + N G++
Sbjct: 327 TEFT----MEKLIAGENHSFALFFKSPGNESEKPKSGSNGGIL 365
Score = 239 (89.2 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 83/290 (28%), Positives = 130/290 (44%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
+++I CG A L+ G+V + S V P + L+N V +ACG+
Sbjct: 79 IRSIVCGEAGAVLLADDGKVLVMDQ-----------STVCRP--LKGLENRQVIQIACGD 125
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEGIHVSSVSCGPWHTA 425
H+ A+T G ++ WG N G LG E + P+ L L GI V+ +S G H+
Sbjct: 126 QHSMALTNDGQLFVWG-ENA-LGQLGLRKEQAGTQSPQHLQS-LCGIPVAQISAGGNHSF 182
Query: 426 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 485
V++ +G +F +G + G LG GD P V SL G +TV +CG HTA + +
Sbjct: 183 VLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSK---- 238
Query: 486 XXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCG-HSLTVALT 544
G +FT+ + P VA L QV+CG H V
Sbjct: 239 --------GGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFED 290
Query: 545 TTGHVYTMGSPVYGQLGDP---KANGKLPTRVEGKLTKNFVEEIACGDYH 591
++ +Y+ G + GQLG+ K + LP + + T+ +E++ G+ H
Sbjct: 291 SSNQIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLIAGENH 340
Score = 189 (71.6 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 47/139 (33%), Positives = 69/139 (49%)
Query: 275 ILGGGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 333
+ G G + +G G D F+P V+S +I+CGG H A ++K G VF++G
Sbjct: 190 VFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGG 249
Query: 334 GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT-LSGDMYTWGGSNCNF-GLL 391
G+LGH D HP+L+ L V V CG HHT S +Y++G C G L
Sbjct: 250 FGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFEDSSNQIYSFG---CGMQGQL 306
Query: 392 GHGNEMSLWLPKKLNGPLE 410
G+G ++ +P + P E
Sbjct: 307 GNGEQVKQSVPLPVLLPTE 325
Score = 182 (69.1 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 62/221 (28%), Positives = 95/221 (42%)
Query: 426 VVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 485
V AG + DG V+ D+ +V P + L+ + ++ ACG H+ A+
Sbjct: 83 VCGEAGAVLLADDGKVLVM---DQSTVCRP--LKGLENRQVIQIACGDQHSMALTN---- 133
Query: 486 XXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLV-PTCVAALVEPNFCQVSCGHSLTVALT 544
G+LF W ++A P + +L Q+S G + + L+
Sbjct: 134 --------DGQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVAQISAGGNHSFVLS 185
Query: 545 TTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 603
+G V+ GS GQLG + +PT V+ K V I+CG H A L+ V+T
Sbjct: 186 LSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVS-ISCGGEHTATLSKGGTVFT 244
Query: 604 WGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 644
+G G G+LGH D + P LV L +V + CG T
Sbjct: 245 FGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHT 285
Score = 44 (20.5 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 611 RLGHGDTDDRNFPSLVEALKDKQVK-SIVCGTSFT 644
++ G+TDD++ L L+ Q+ I C T+ T
Sbjct: 533 QISRGETDDQSTRHLKNFLEILQMAYQICCSTNIT 567
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 255 (94.8 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 80/321 (24%), Positives = 142/321 (44%)
Query: 311 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 370
+C H+ L+T +G+++SWG G+LGHG V P+LI+AL + + L ACG +HT
Sbjct: 155 SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTL 213
Query: 371 AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 430
A+T +G ++ +G + G LG GN+ +P G ++ ++CG + ++
Sbjct: 214 ALTDTGSVFAFGENK--MGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMLMDCK 270
Query: 431 GQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHT----------AAV 479
G L++FG +G LGH D ++ + ++ L R A + T V
Sbjct: 271 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVV 330
Query: 480 VEVMVGXXXXXXXXXGK-LFTWXXXXXXXXXXXXKEARLVPTCVAALVEPN--FCQVSCG 536
+V G K +F+W ++ +VP V P Q+ G
Sbjct: 331 RDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAG 390
Query: 537 HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 596
++ + A++ G ++ +G + + P V+ L + +ACG + V
Sbjct: 391 YTCSFAVSEVGGLF-----FWGATNTSRESTMYPKAVQD-LCGWRIRSLACGKSSIIVAA 444
Query: 597 SRTEVYTWGKGAN-GRLGHGD 616
+ + +WG G LG+GD
Sbjct: 445 DESTI-SWGPSPTFGELGYGD 464
Score = 178 (67.7 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 51/179 (28%), Positives = 89/179 (49%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V+++ACG H ++ Q VFSWG GRLGH D P+L+
Sbjct: 330 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYA 389
Query: 367 HHTCAVTLS--GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 424
+TC+ +S G ++ WG +N + E +++ PK + L G + S++CG +
Sbjct: 390 GYTCSFAVSEVGGLFFWGATNTS-------RESTMY-PKAVQD-LCGWRIRSLACGK--S 438
Query: 425 AVVTSAGQ-LFTFGDG-TFGVLGHGDRI--SVSTPREVDSLKGLRTVRAACGVWHTAAV 479
+++ +A + ++G TFG LG+GD S + +EV +L G+ + + A G H+ +
Sbjct: 439 SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 497
Score = 177 (67.4 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 74/315 (23%), Positives = 126/315 (40%)
Query: 348 PKLIDALKNINVELVACGE--HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 405
P L + V V G H+ +T G +++WG + G LGHG+ + P+ +
Sbjct: 137 PHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEK--GQLGHGDTKRVEAPRLI 194
Query: 406 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGL 464
L + +CG HT +T G +F FG+ G LG G++ +V +P ++ G
Sbjct: 195 EA-LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQ 252
Query: 465 RTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKL-FTWXXXXXXXXXXXXKEARLVPTCVA 523
+ ACG + +++ G+L + LVP VA
Sbjct: 253 PITKMACGA-EFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVA 311
Query: 524 ALVE----------PNFC--QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT 571
+E PN V+CG + T+ L + V++ G YG+LG + ++
Sbjct: 312 IFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 371
Query: 572 RVEGKLTK---NFVEEIACGDYHVAVLTSRTE-VYTWGKGANGRLGHGDTDDRNFPSLVE 627
R+ KL +I G Y + S ++ WG R + +P V+
Sbjct: 372 RLV-KLFDFPGRGATQIYAG-YTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQ 423
Query: 628 ALKDKQVKSIVCGTS 642
L +++S+ CG S
Sbjct: 424 DLCGWRIRSLACGKS 438
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 246 (91.7 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 88/295 (29%), Positives = 130/295 (44%)
Query: 326 VFSWGEELGGRLGHGVDSDVSHPK-LIDALKNINVELVACGEHHTCAVTLSGDMYTWG-G 383
+F+WG G+LG G DV P+ L D K +V + G H+ VT GD++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLN 76
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH-TAVVTSAGQLFTFGDGTFG 442
+ GL GH ++ + P K L G + V+CG W T ++T GQ+ + G +FG
Sbjct: 77 KDGQLGL-GHTEDIPYFTPCK---SLFGCPIQQVACG-WDFTIMLTENGQVLSCGSNSFG 131
Query: 443 VLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHT-AAVVEVMVGXXXXXXXXXGKLFT 499
LG HG R V P+ ++ K + V A G+ H AA +V G+
Sbjct: 132 QLGVPHGPRRCV-VPQAIELHKE-KVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLC 189
Query: 500 WXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 559
KE P+ V L V G + +LT G VY GS +GQ
Sbjct: 190 --PGQTLPLFFTAKE----PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQ 243
Query: 560 LGDPKANGKLPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 613
L + A +P ++E +N V I G H+ T +++TWG+ G+LG
Sbjct: 244 LANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 183 (69.5 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 84/312 (26%), Positives = 133/312 (42%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFV-PKAVESAVVLDVQNIACGGRHAALVTK 322
+F WG G LG G H+ +++ F P++V + I GG H+A+VT
Sbjct: 17 LFAWG-ANSYGQLGLG-HKEDVLLPQQLNDFCKPRSV--------RRITGGGGHSAVVTD 66
Query: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G++F G G+LG G D+ + +L ++ VACG T +T +G + + G
Sbjct: 67 GGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCG 126
Query: 383 GSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 440
SN +FG LG HG + +P+ + L V ++ G H T++G +F +G G
Sbjct: 127 -SN-SFGQLGVPHGPRRCV-VPQAIE--LHKEKVVCIAAGLRHAVAATASGIVFQWGTGL 181
Query: 441 FGV---LGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXX-XG 495
L G + + T +E + GL +A C V+ G G
Sbjct: 182 ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMC----------VLAGSDHSASLTDAG 231
Query: 496 KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQ------VSCGHSLTVALTTTGHV 549
+++ W EA +P V +E + Q + G + VA T TG +
Sbjct: 232 EVYVWGSNKHGQLA---NEAAFLP--VPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKM 286
Query: 550 YTMGSPVYGQLG 561
+T G YGQLG
Sbjct: 287 FTWGRADYGQLG 298
Score = 176 (67.0 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 79/290 (27%), Positives = 124/290 (42%)
Query: 371 AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 430
A + ++ WG ++ +G LG G++ + LP++LN + V ++ G H+AVVT
Sbjct: 10 AAPAAAALFAWGANS--YGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDG 67
Query: 431 GQLFTFG---DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXX 487
G LF G DG G LGH + I TP + SL G + ACG W +M+
Sbjct: 68 GDLFVCGLNKDGQLG-LGHTEDIPYFTPCK--SLFGCPIQQVACG-WDFT----IML--- 116
Query: 488 XXXXXXXGKLFTWXXXXXXXXXXXXKEAR-LVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
G++ + R +VP + E C ++ G VA T +
Sbjct: 117 ----TENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVC-IAAGLRHAVAATAS 171
Query: 547 GHVYTMGSPVY--------GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 598
G V+ G+ + GQ K P+RV G L + + G H A LT
Sbjct: 172 GIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTG-LENSKAMCVLAGSDHSASLTDA 230
Query: 599 TEVYTWGKGANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGTSFTAA 646
EVY WG +G+L + + P +EA ++++V +I G + A
Sbjct: 231 GEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 279
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 65/236 (27%), Positives = 96/236 (40%)
Query: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
P + +A LF +G ++G LG G + V P++++ R+VR G +AVV
Sbjct: 5 PSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVV 64
Query: 481 EVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLT 540
G LF E T +L QV+CG T
Sbjct: 65 -----------TDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFT 113
Query: 541 VALTTTGHVYTMGSPVYGQLGDPKANGK--LPTRVEGKLTKNFVEEIACGDYHVAVLTSR 598
+ LT G V + GS +GQLG P + +P +E L K V IA G H T+
Sbjct: 114 IMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIE--LHKEKVVCIAAGLRHAVAATAS 171
Query: 599 TEVYTWGKG---ANGRLGHGDTDDRNF----PSLVEALKDKQVKSIVCGTSFTAAI 647
V+ WG G RL G T F PS V L++ + ++ G+ +A++
Sbjct: 172 GIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASL 227
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 154 (59.3 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 34/98 (34%), Positives = 52/98 (53%)
Query: 285 SYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 344
+Y + + P A E L + + G HA L+ G+VFSWG G+LGHG
Sbjct: 142 AYVSPRAPFYRPLAPE----LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEA 197
Query: 345 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
P+L++AL+ + + VA G H+ V+ +GD+Y WG
Sbjct: 198 ELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWG 235
Score = 149 (57.5 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 33/77 (42%), Positives = 43/77 (55%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 461
P L+ P+ G SCG HTAVVT G+L+T+G G +G LGH D S+ PR V+
Sbjct: 289 PALLDLPM-GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYF 347
Query: 462 --KGLRTVRAACGVWHT 476
K L+ CG W+T
Sbjct: 348 VDKQLQVKAVTCGPWNT 364
Score = 145 (56.1 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 348 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 407
P L+D + +CG HT VT +G++YTWG +G LGH + SL P+++
Sbjct: 289 PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGK--YGQLGHEDTTSLDRPRRVEY 346
Query: 408 PLEG-IHVSSVSCGPWHTAV 426
++ + V +V+CGPW+T V
Sbjct: 347 FVDKQLQVKAVTCGPWNTYV 366
Score = 139 (54.0 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 30/68 (44%), Positives = 38/68 (55%)
Query: 586 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ--VKSIVCGTSF 643
+CG H AV+T E+YTWG G G+LGH DT + P VE DKQ VK++ CG
Sbjct: 304 SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWN 363
Query: 644 TAAICLHK 651
T + K
Sbjct: 364 TYVYAVEK 371
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 27/94 (28%), Positives = 47/94 (50%)
Query: 278 GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
GG + + F P ++ + D +CG RH A+VT+ GE+++WG G+L
Sbjct: 272 GGAEDGAPAPFIAVQPF-PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQL 330
Query: 338 GHGVDSDVSHPKLIDAL--KNINVELVACGEHHT 369
GH + + P+ ++ K + V+ V CG +T
Sbjct: 331 GHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNT 364
Score = 121 (47.7 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 471
+ + G H ++ +AGQ+F++G G G LGHG + PR +++L+GL A
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAA 217
Query: 472 GVWHTAAVVE 481
G WH+ V E
Sbjct: 218 GGWHSVCVSE 227
Score = 116 (45.9 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 365 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 424
G H + +G +++WGG G LGHG + L +L L+G+ ++ V+ G WH+
Sbjct: 166 GAEHALLLDAAGQVFSWGGGR--HGQLGHGT-LEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 425 AVVTSAGQLFTFGDGTFGVL 444
V+ G ++ +G G L
Sbjct: 223 VCVSETGDIYIWGWNESGQL 242
Score = 96 (38.9 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNF-VEEIACGD 589
+ SCG T +T TG +YT G YGQLG P RVE + K V+ + CG
Sbjct: 302 KASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGP 361
Query: 590 YHVAV 594
++ V
Sbjct: 362 WNTYV 366
Score = 82 (33.9 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GGG H + ++ + P+ +E+ L + +A GG H+ V++ G+++ WG G+
Sbjct: 183 GGGRHGQLGHGTLEAE-LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 241
Query: 337 L 337
L
Sbjct: 242 L 242
Score = 75 (31.5 bits), Expect = 4.9e-11, Sum P(3) = 4.9e-11
Identities = 21/72 (29%), Positives = 31/72 (43%)
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
G++F+W EA L P + AL +V+ G +V ++ TG +Y G
Sbjct: 177 GQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGW 236
Query: 555 PVYGQLGDPKAN 566
GQL P N
Sbjct: 237 NESGQLALPTRN 248
Score = 61 (26.5 bits), Expect = 4.9e-11, Sum P(3) = 4.9e-11
Identities = 22/67 (32%), Positives = 28/67 (41%)
Query: 381 WGGSN-CNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 438
W G C FG LG G + P L G+ + VS +TA VT G+L G
Sbjct: 9 WFGFGFCGFGQELGSGRGRQVHSPSPLRA---GVDICRVSASWSYTAFVTRGGRLELSGS 65
Query: 439 GTFGVLG 445
+ G G
Sbjct: 66 AS-GAAG 71
Score = 48 (22.0 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 455 PREVDSLKGLRTVRAACGVWHTAAV 479
P +D G V+A+CG HTA V
Sbjct: 289 PALLDLPMGSDAVKASCGSRHTAVV 313
Score = 40 (19.1 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 441 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGV---W-HTAAV 479
FG G G + R+V S LR C V W +TA V
Sbjct: 12 FGFCGFGQELGSGRGRQVHSPSPLRAGVDICRVSASWSYTAFV 54
Score = 39 (18.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 529 NFCQVSCGHSLTVALTTTGHVYTMGS 554
+ C+VS S T +T G + GS
Sbjct: 40 DICRVSASWSYTAFVTRGGRLELSGS 65
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 278 (102.9 bits), Expect = 2.5e-18, Sum P(3) = 2.5e-18
Identities = 88/320 (27%), Positives = 139/320 (43%)
Query: 308 QNIACGGRHAALVTKQGEVFSW-----GEELGGRLGHGVDSDVSHPKLIDALKNINVELV 362
+ + G H A+VT + E+++W G +L G+LGHG + PK ++ L+ +V+ V
Sbjct: 354 RQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKV 413
Query: 363 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLG----HGNEM--SLWLPKKLNGPLEGIHVSS 416
+CG T +T G +Y++G +G LG G+E+ L + LN P V
Sbjct: 414 SCGSDFTVCITDEGQLYSFGSDY--YGCLGVNQSAGSEVLEPLLVDFFLNEP-----VDQ 466
Query: 417 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 476
VSCG H +T + ++++G G +G LG V +P++V+ +GL V CG
Sbjct: 467 VSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCG--SD 524
Query: 477 AAVVEVMVGXXXX-XXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAA--LVEPNFCQV 533
+ + + G KL +E + A L +
Sbjct: 525 GSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSI 584
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV-EGKLTKNFVEEIACGDYHV 592
S G + T A+ G + T GS GQLG L + G L V ++CGD
Sbjct: 585 SPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFT 644
Query: 593 AVLTSRTEVYTWGKGANGRL 612
T+ ++ WG G NGRL
Sbjct: 645 TAATADNHIFAWGNGGNGRL 664
Score = 235 (87.8 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 96/353 (27%), Positives = 141/353 (39%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN-INVELVACGEHHTCAVTLS 375
A + ++ EV+ WG GG+ + P+ +D K V G+ H VT+
Sbjct: 322 AVVTSRSSEVYVWG---GGK---------TTPQKLDVFKGGWRARQVCAGDAHFAVVTVE 369
Query: 376 GDMYTW----GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
++YTW GGS + G LGHG+ S PK + L+G V VSCG T +T G
Sbjct: 370 KELYTWVNMQGGSKLH-GQLGHGDRASYRQPKHVE-KLQGKSVQKVSCGSDFTVCITDEG 427
Query: 432 QLFTFGDGTFGVLGHGDRIS--VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXX 489
QL++FG +G LG V P VD + +CG H A+
Sbjct: 428 QLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTR-------- 479
Query: 490 XXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFC--QVSCGHSLTVALTTTG 547
+++W ++ P V V+ C V CG + LT TG
Sbjct: 480 ----SKSVYSWGCGEYGRLGLDSEDDVYSPQKVE--VQRGLCIVNVCCGSDGSFLLTLTG 533
Query: 548 HVYTMGSPVYGQLG---------DPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAV 594
V G + +LG + +A ++P L K + I+ G H A
Sbjct: 534 KVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAA 593
Query: 595 LTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA-LKDKQVKSIVCGTSFTAA 646
+ R + T+G G+LG GD +L+ L KQV + CG FT A
Sbjct: 594 IDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTA 646
Score = 199 (75.1 bits), Expect = 7.2e-10, Sum P(3) = 7.2e-10
Identities = 54/185 (29%), Positives = 89/185 (48%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
++ W G L G + G A + PK VE VQ ++CG +T +
Sbjct: 372 LYTWVNMQGGSKLHGQLGH-GDRASYRQ----PKHVEKLQGKSVQKVSCGSDFTVCITDE 426
Query: 324 GEVFSWGEELGGRLG--HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTW 381
G+++S+G + G LG S+V P L+D N V+ V+CG+ H A+T S +Y+W
Sbjct: 427 GQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSW 486
Query: 382 GGSNCN-FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 440
G C +G LG +E ++ P+K+ G+ + +V CG + ++T G++ G
Sbjct: 487 G---CGEYGRLGLDSEDDVYSPQKVEVQ-RGLCIVNVCCGSDGSFLLTLTGKVLACGLNE 542
Query: 441 FGVLG 445
LG
Sbjct: 543 HNKLG 547
Score = 182 (69.1 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 55/187 (29%), Positives = 84/187 (44%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V ++CG H +T+ V+SWG GRLG + DV P+ ++ + + + V CG
Sbjct: 464 VDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGS 523
Query: 367 HHTCAVTLSGDMYTWG-------GSN-CNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSS 416
+ +TL+G + G G N G++ H E+ L L + S
Sbjct: 524 DGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRS 583
Query: 417 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTVRAACG-VW 474
+S G HTA + G+L TFG G LG GD R + L G + +R +CG +
Sbjct: 584 ISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEF 643
Query: 475 HTAAVVE 481
TAA +
Sbjct: 644 TTAATAD 650
Score = 169 (64.5 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 80/294 (27%), Positives = 119/294 (40%)
Query: 375 SGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 434
S ++Y WGG P+KL+ G V G H AVVT +L+
Sbjct: 328 SSEVYVWGGGKTT--------------PQKLDVFKGGWRARQVCAGDAHFAVVTVEKELY 373
Query: 435 TF-----GDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXX 489
T+ G G LGHGDR S P+ V+ L+G + +CG T + +
Sbjct: 374 TWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITD-------- 425
Query: 490 XXXXXGKLFTWXXXXXXXXXXXXKEAR--LVPTCVAALVEPNFCQVSCGHSLTVALTTTG 547
G+L+++ L P V + QVSCG S +ALT +
Sbjct: 426 ----EGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSK 481
Query: 548 HVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 606
VY+ G YG+LG D + + P +VE + V + CG +LT +V G
Sbjct: 482 SVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVN-VCCGSDGSFLLTLTGKVLACGL 540
Query: 607 GANGRLG-----HGDTDDRNF---P-----SLVEALKDKQVKSIVCGTSFTAAI 647
+ +LG G + F P +L + L +++SI G + TAAI
Sbjct: 541 NEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAI 594
Score = 144 (55.7 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 47/172 (27%), Positives = 72/172 (41%)
Query: 335 GRLGHGVDSDVSHPKLIDALKNIN---VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLL 391
G + H +V + + K ++ + ++ G HT A+ G + T+G + C G L
Sbjct: 554 GIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKC--GQL 611
Query: 392 GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG------ 445
G G+ L GPL G V VSCG T T+ +F +G+G G L
Sbjct: 612 GVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNER 671
Query: 446 -HGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXG 495
G I S PR + SL + + +C WHT +VE ++ G
Sbjct: 672 PQGSDICTSWPRPIFGSLHHVTDL--SCRGWHTILIVEKVLNSKTIRSNSSG 721
Score = 40 (19.1 bits), Expect = 2.5e-18, Sum P(3) = 2.5e-18
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 766 KKVESGSSKRNKKQEFNRTRGLPLP---NGVSQGNALNNSKSSNPV 808
+ +ES S +QE +P+P N VS ++ N + S V
Sbjct: 773 ENMESSSCPSWLRQELEEAEFIPMPDTPNFVSAESSQNGTTSMQDV 818
Score = 39 (18.8 bits), Expect = 2.5e-18, Sum P(3) = 2.5e-18
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 28 LLKYGRRGKPKFCPFRLANDESILIWISGKEEKHLKLSHVSR 69
+L +G G+ +R D+S+++W KE +LS R
Sbjct: 39 VLGHGAYGEATL--YRRTEDDSLVVW---KEVGLARLSEKER 75
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 154 (59.3 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 34/98 (34%), Positives = 52/98 (53%)
Query: 285 SYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD 344
+Y + + P A E L + + G HA L+ G+VFSWG G+LGHG
Sbjct: 142 AYVSPRAPFYRPLAPE----LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEA 197
Query: 345 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
P+L++AL+ + + VA G H+ V+ +GD+Y WG
Sbjct: 198 ELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWG 235
Score = 149 (57.5 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 33/77 (42%), Positives = 43/77 (55%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 461
P L+ P+ G SCG HTAVVT G+L+T+G G +G LGH D S+ PR V+
Sbjct: 291 PALLDLPM-GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYF 349
Query: 462 --KGLRTVRAACGVWHT 476
K L+ CG W+T
Sbjct: 350 VDKQLQVKAVTCGPWNT 366
Score = 145 (56.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 348 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 407
P L+D + +CG HT VT +G++YTWG +G LGH + SL P+++
Sbjct: 291 PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGK--YGQLGHEDTTSLDRPRRVEY 348
Query: 408 PLEG-IHVSSVSCGPWHTAV 426
++ + V +V+CGPW+T V
Sbjct: 349 FVDKQLQVKAVTCGPWNTYV 368
Score = 139 (54.0 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 30/68 (44%), Positives = 38/68 (55%)
Query: 586 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ--VKSIVCGTSF 643
+CG H AV+T E+YTWG G G+LGH DT + P VE DKQ VK++ CG
Sbjct: 306 SCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWN 365
Query: 644 TAAICLHK 651
T + K
Sbjct: 366 TYVYAVEK 373
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 27/94 (28%), Positives = 47/94 (50%)
Query: 278 GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
GG + + F P ++ + D +CG RH A+VT+ GE+++WG G+L
Sbjct: 274 GGAEDGAPAPFIAVQPF-PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQL 332
Query: 338 GHGVDSDVSHPKLIDAL--KNINVELVACGEHHT 369
GH + + P+ ++ K + V+ V CG +T
Sbjct: 333 GHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNT 366
Score = 121 (47.7 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 471
+ + G H ++ +AGQ+F++G G G LGHG + PR +++L+GL A
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAA 217
Query: 472 GVWHTAAVVE 481
G WH+ V E
Sbjct: 218 GGWHSVCVSE 227
Score = 116 (45.9 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 365 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 424
G H + +G +++WGG G LGHG + L +L L+G+ ++ V+ G WH+
Sbjct: 166 GAEHALLLDAAGQVFSWGGGR--HGQLGHGT-LEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 425 AVVTSAGQLFTFGDGTFGVL 444
V+ G ++ +G G L
Sbjct: 223 VCVSETGDIYIWGWNESGQL 242
Score = 96 (38.9 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNF-VEEIACGD 589
+ SCG T +T TG +YT G YGQLG P RVE + K V+ + CG
Sbjct: 304 KASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGP 363
Query: 590 YHVAV 594
++ V
Sbjct: 364 WNTYV 368
Score = 82 (33.9 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GGG H + ++ + P+ +E+ L + +A GG H+ V++ G+++ WG G+
Sbjct: 183 GGGRHGQLGHGTLEAE-LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 241
Query: 337 L 337
L
Sbjct: 242 L 242
Score = 75 (31.5 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 21/72 (29%), Positives = 31/72 (43%)
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
G++F+W EA L P + AL +V+ G +V ++ TG +Y G
Sbjct: 177 GQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGW 236
Query: 555 PVYGQLGDPKAN 566
GQL P N
Sbjct: 237 NESGQLALPTRN 248
Score = 61 (26.5 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 22/67 (32%), Positives = 28/67 (41%)
Query: 381 WGGSN-CNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 438
W G C FG LG G + P L G+ + VS +TA VT G+L G
Sbjct: 9 WFGFGFCGFGQELGSGRGRQVHSPSPLRA---GVDICRVSASWSYTAFVTRGGRLELSGS 65
Query: 439 GTFGVLG 445
+ G G
Sbjct: 66 AS-GAAG 71
Score = 48 (22.0 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 455 PREVDSLKGLRTVRAACGVWHTAAV 479
P +D G V+A+CG HTA V
Sbjct: 291 PALLDLPMGSDAVKASCGSRHTAVV 315
Score = 40 (19.1 bits), Expect = 6.6e-09, Sum P(3) = 6.6e-09
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 441 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGV---W-HTAAV 479
FG G G + R+V S LR C V W +TA V
Sbjct: 12 FGFCGFGQELGSGRGRQVHSPSPLRAGVDICRVSASWSYTAFV 54
Score = 39 (18.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 529 NFCQVSCGHSLTVALTTTGHVYTMGS 554
+ C+VS S T +T G + GS
Sbjct: 40 DICRVSASWSYTAFVTRGGRLELSGS 65
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 236 (88.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 93/352 (26%), Positives = 146/352 (41%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN-INVELVACGEHHTCAVTLS 375
A + ++ EV+ WG GG+ S P+ +D +K+ + V G H VT+
Sbjct: 340 AVVTSRTSEVYVWG---GGK---------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387
Query: 376 GDMYTW----GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
++YTW GG+ + G LGHG++ S PK + L+G + VSCG T VT G
Sbjct: 388 KELYTWVNMQGGTKLH-GQLGHGDKASYRQPKHVE-KLQGKAIRQVSCGDDFTVCVTDEG 445
Query: 432 QLFTFGDGTFGVLGHGDRIS---VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
QL+ FG +G +G D+++ V P +++ + +CG H +
Sbjct: 446 QLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTR------- 497
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 548
++++W +E P V V CG T LT +G
Sbjct: 498 -----NKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGK 552
Query: 549 VYTMGSPVYGQLG---------DPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAVL 595
V G + +LG + +A ++P L K + IA G H A +
Sbjct: 553 VLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAI 612
Query: 596 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA-LKDKQVKSIVCGTSFTAA 646
R + T+G G+LG G+ R +L+ L KQV + CG FT A
Sbjct: 613 DERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 664
Score = 212 (79.7 bits), Expect = 5.2e-18, Sum P(3) = 5.2e-18
Identities = 54/172 (31%), Positives = 85/172 (49%)
Query: 308 QNIACGGRHAALVTKQGEVFSW-----GEELGGRLGHGVDSDVSHPKLIDALKNINVELV 362
+ + G H A+VT + E+++W G +L G+LGHG + PK ++ L+ + V
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQV 431
Query: 363 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS--LWLPKKLNGPLEGIHVSSVSCG 420
+CG+ T VT G +Y +G +G +G + P +LN L V VSCG
Sbjct: 432 SCGDDFTVCVTDEGQLYAFGSDY--YGCMGVDKVAGPEVLEPMQLNFFLNN-PVEQVSCG 488
Query: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
H V+T +++++G G +G LG TP++VD K L V CG
Sbjct: 489 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540
Score = 208 (78.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 85/350 (24%), Positives = 154/350 (44%)
Query: 278 GGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GG G G K PK VE ++ ++CG VT +G+++++G + G
Sbjct: 398 GGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457
Query: 337 LGHGVDSDVSHPKLIDALK-----NINVELVACGEHHTCAVTLSGDMYTWGGSNCN-FGL 390
+G VD V+ P++++ ++ N VE V+CG++H +T + ++Y+WG C +G
Sbjct: 458 MG--VDK-VAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNKEVYSWG---CGEYGR 511
Query: 391 LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF--------- 441
LG +E + P+K++ P + + + +V CG T ++T +G++ G F
Sbjct: 512 LGLDSEEDYYTPQKVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCM 570
Query: 442 -GVLGHG--DRISVSTPREVDSLKGLRTVRA-ACGVWHTAAVVEVMVGXXXXXXXXXGKL 497
G++ H I +T + +R A G HTAA+ E G+L
Sbjct: 571 SGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDE------------RGRL 618
Query: 498 FTWXXXXXXXXXXXXKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 556
T+ + RL + L +VSCG T+A T H++ G+
Sbjct: 619 LTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGG 678
Query: 557 YGQLG-DP--KANGK-----LPTRVEGKLTKNFVEEIACGDYHVAVLTSR 598
G+L P + +G P + G L + V +++C +H ++ +
Sbjct: 679 NGRLAMTPTERPHGSDICTSWPRPIFGSL--HHVPDLSCRGWHTILIVEK 726
Score = 184 (69.8 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 73/239 (30%), Positives = 105/239 (43%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG C G LG Y K+D VPKA+ +++ VQ CG L+T+
Sbjct: 501 VYSWG-CGEYGRLGLDSEED-YYTPQKVD--VPKAL---IIVAVQ---CGCDGTFLLTQS 550
Query: 324 GEVFSWG----EELG------GRLGHGVDSDVSHPKLIDALKNIN---VELVACGEHHTC 370
G+V + G +LG G + H ++ + K ++ + +A G+ HT
Sbjct: 551 GKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTA 610
Query: 371 AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 430
A+ G + T+G + C G LG GN L GPL G V VSCG T T
Sbjct: 611 AIDERGRLLTFGCNKC--GQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD 668
Query: 431 GQLFTFGDGTFGVLG-------HGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAVVE 481
+F +G+G G L HG I S PR + SL + + +C WHT +VE
Sbjct: 669 NHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDL--SCRGWHTILIVE 725
Score = 142 (55.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 71/267 (26%), Positives = 109/267 (40%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD---GT--FGVLGHGDRISVSTPR 456
P+KL+ G V G H AVVT +L+T+ + GT G LGHGD+ S P+
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418
Query: 457 EVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEAR 516
V+ L+G + +CG T V + G+L+ +
Sbjct: 419 HVEKLQGKAIRQVSCGDDFTVCVTD------------EGQLYAFGSDYYGCMGVDKVAGP 466
Query: 517 --LVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRV 573
L P + + QVSCG + V LT VY+ G YG+LG D + + P +V
Sbjct: 467 EVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKV 526
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG-----HGDTDDRNF---P-- 623
+ V + CG +LT +V G +LG G + + P
Sbjct: 527 DVPKALIIVA-VQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYT 585
Query: 624 ---SLVEALKDKQVKSIVCGTSFTAAI 647
+L + L ++++I G + TAAI
Sbjct: 586 TSFTLAKQLSFYKIRTIAPGKTHTAAI 612
Score = 105 (42.0 bits), Expect = 5.2e-18, Sum P(3) = 5.2e-18
Identities = 26/87 (29%), Positives = 38/87 (43%)
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV-EGKLTKNFVEEIACGDYH 591
++ G + T A+ G + T G GQLG +L + G L V ++CGD
Sbjct: 602 IAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEF 661
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTD 618
T ++ WG G NGRL T+
Sbjct: 662 TIAATDDNHIFAWGNGGNGRLAMTPTE 688
Score = 41 (19.5 bits), Expect = 5.2e-18, Sum P(3) = 5.2e-18
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 42 FRLANDESILIWISGKEEKHLKLSHVSR 69
+R D+S+++W KE ++LS R
Sbjct: 69 YRRTEDDSLVVW---KEVDLIRLSEKER 93
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 250 (93.1 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 87/353 (24%), Positives = 152/353 (43%)
Query: 279 GIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG 338
G HR G AGV++ + V S +C H+ L+T +G+++SWG G+LG
Sbjct: 138 GPHRYGCLAGVRV-----RTVVSG--------SCAA-HSLLITTEGKLWSWGRNEKGQLG 183
Query: 339 HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS 398
HG V P+LI+ L + + ACG +HT A+T +G ++ +G + G LG GN+
Sbjct: 184 HGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENK--MGQLGLGNQTD 241
Query: 399 LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPRE 457
+P G ++ ++CG + ++ G L++FG +G LGH D ++ +
Sbjct: 242 A-VPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQR 300
Query: 458 VDSLKGLRTVRAACGVWHT----------AAVVEVMVGXXXXXXXXXGK-LFTWXXXXXX 506
++ L R A + T V +V G K +F+W
Sbjct: 301 IEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYG 360
Query: 507 XXXXXXKEARLVPTCVAALVEPN--FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPK 564
++ +VP V P Q+ G++ + A++ G ++ +G +
Sbjct: 361 RLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLF-----FWGATNTSR 415
Query: 565 ANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGAN-GRLGHGD 616
+ P V+ L + +ACG + V + + +WG G LG+GD
Sbjct: 416 ESTMYPKAVQD-LCGWRIRSLACGKSSIIVAADESTI-SWGPSPTFGELGYGD 466
Score = 191 (72.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 76/315 (24%), Positives = 129/315 (40%)
Query: 348 PKLIDALKNINVELVACGE--HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 405
P L + V V G H+ +T G +++WG + G LGHG+ + P+ +
Sbjct: 139 PHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEK--GQLGHGDTKRVEAPRLI 196
Query: 406 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVDSLKGL 464
G + VS+ +CG HT +T G +F FG+ G LG G++ +V +P ++ G
Sbjct: 197 EGLSHEVIVSA-ACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQ 254
Query: 465 RTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKL-FTWXXXXXXXXXXXXKEARLVPTCVA 523
+ ACG + +++ G+L + LVP VA
Sbjct: 255 PITKMACGA-EFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVA 313
Query: 524 ALVE----------PNFC--QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPT 571
+E PN V+CG + T+ L + V++ G YG+LG + ++
Sbjct: 314 IFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 373
Query: 572 RVEGKLTK---NFVEEIACGDYHVAVLTSRTE-VYTWGKGANGRLGHGDTDDRNFPSLVE 627
R+ KL +I G Y + S ++ WG R + +P V+
Sbjct: 374 RLV-KLFDFPGRGASQIYAG-YTCSFAVSEVGGLFFWGATNTSR------ESTMYPKAVQ 425
Query: 628 ALKDKQVKSIVCGTS 642
L +++S+ CG S
Sbjct: 426 DLCGWRIRSLACGKS 440
Score = 133 (51.9 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 40/128 (31%), Positives = 61/128 (47%)
Query: 521 CVAALVEPNFCQVSCG-HSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKL 577
C+A + SC HSL + TT G +++ G GQLG D K + P +EG L
Sbjct: 144 CLAGVRVRTVVSGSCAAHSLLI--TTEGKLWSWGRNEKGQLGHGDTK-RVEAPRLIEG-L 199
Query: 578 TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ-VKS 636
+ + ACG H LT V+ +G+ G+LG G+ D PS + + + Q +
Sbjct: 200 SHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDA-VPSPAQIMYNGQPITK 258
Query: 637 IVCGTSFT 644
+ CG F+
Sbjct: 259 MACGAEFS 266
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 161 (61.7 bits), Expect = 9.4e-18, Sum P(2) = 9.4e-18
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 305 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKLIDALKNINVELVA 363
L V+ + G HA L+ + G+VFSWG G+LGHG +++++ P+L++AL+ + + VA
Sbjct: 161 LRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELE-PRLLEALQGLRMAEVA 219
Query: 364 CGEHHTCAVTLSGDMYTWG 382
G H+ V+ +GD+Y WG
Sbjct: 220 AGGWHSVCVSETGDIYIWG 238
Score = 136 (52.9 bits), Expect = 9.4e-18, Sum P(2) = 9.4e-18
Identities = 34/77 (44%), Positives = 43/77 (55%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS- 460
P L+ PL G SCG HTAVVT G+L+T+G G +G LGH D S P V+
Sbjct: 293 PALLDLPL-GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYF 351
Query: 461 LKGLRTVRAA-CGVWHT 476
++ VRA CG W+T
Sbjct: 352 VERQLEVRAVTCGPWNT 368
Score = 136 (52.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 348 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 407
P L+D + +CG HT VT +G++YTWG +G LGH + S P ++
Sbjct: 293 PALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGK--YGQLGHKDSTSSDQPCRVEY 350
Query: 408 PLEG-IHVSSVSCGPWHTAV 426
+E + V +V+CGPW+T V
Sbjct: 351 FVERQLEVRAVTCGPWNTYV 370
Score = 133 (51.9 bits), Expect = 3.5e-13, Sum P(3) = 3.5e-13
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 471
+ V + G H ++ AGQ+F++G G G LGHG + PR +++L+GLR A
Sbjct: 161 LRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAA 220
Query: 472 GVWHTAAVVE 481
G WH+ V E
Sbjct: 221 GGWHSVCVSE 230
Score = 125 (49.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 586 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ--VKSIVCG 640
+CG H AV+T E+YTWG G G+LGH D+ + P VE ++Q V+++ CG
Sbjct: 308 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQLEVRAVTCG 364
Score = 95 (38.5 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 24/71 (33%), Positives = 33/71 (46%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNF-VEEIACGD 589
+ SCG T +T TG +YT G YGQLG + P RVE + + V + CG
Sbjct: 306 KASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQLEVRAVTCGP 365
Query: 590 YHVAVLTSRTE 600
++ V E
Sbjct: 366 WNTYVYAVERE 376
Score = 85 (35.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GGG H + ++ + P+ +E+ L + +A GG H+ V++ G+++ WG G+
Sbjct: 186 GGGRHGQLGHGSLEAE-LEPRLLEALQGLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 244
Query: 337 L 337
L
Sbjct: 245 L 245
Score = 80 (33.2 bits), Expect = 5.2e-08, Sum P(4) = 5.2e-08
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
G++F+W EA L P + AL +V+ G +V ++ TG +Y G
Sbjct: 180 GQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAAGGWHSVCVSETGDIYIWGW 239
Query: 555 PVYGQLGDPKANGKLPTRVEGKLTK 579
GQL P +G V + T+
Sbjct: 240 NESGQLALPTRSGTEKKTVREEATE 264
Score = 47 (21.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 455 PREVDSLKGLRTVRAACGVWHTAAV 479
P +D G V+A+CG HTA V
Sbjct: 293 PALLDLPLGSDAVKASCGSRHTAVV 317
Score = 46 (21.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 531 CQVSCGHSLTVALTTTGHVYTMGS 554
CQVS S T +T G V GS
Sbjct: 43 CQVSASWSYTALVTRGGRVELSGS 66
Score = 40 (19.1 bits), Expect = 5.2e-08, Sum P(4) = 5.2e-08
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 392 GHGNEMSLWLP-KKLNGPLEGIHVSSVSCG 420
G G E+ W+P L G E + V +++ G
Sbjct: 92 GSGTELQAWVPGSALQG--EPLWVQNLASG 119
Score = 39 (18.8 bits), Expect = 3.5e-13, Sum P(3) = 3.5e-13
Identities = 23/78 (29%), Positives = 35/78 (44%)
Query: 265 FIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 324
F +G C LG G +G +A + S P+ + +A DV ++ + ALVT+ G
Sbjct: 10 FGFGFCGFGQALGSG---NGQHA---VHS--PEPLHAAD--DVCQVSASWSYTALVTRGG 59
Query: 325 EVFSWGEELGGRLGHGVD 342
V EL G + D
Sbjct: 60 RV-----ELSGSVSCAAD 72
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 236 (88.1 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 92/352 (26%), Positives = 146/352 (41%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN-INVELVACGEHHTCAVTLS 375
A + ++ EV+ WG GG+ S P+ +D +K+ + V G H VT+
Sbjct: 359 AVVTSRTSEVYVWG---GGK---------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 406
Query: 376 GDMYTW----GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
++YTW GG+ + G LGHG++ S PK + L+G + VSCG T VT G
Sbjct: 407 KELYTWVNMQGGTKLH-GQLGHGDKASYRQPKHVE-KLQGKAIRQVSCGDDFTVCVTDEG 464
Query: 432 QLFTFGDGTFGVLGHGDRIS---VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
QL+ FG +G +G D+++ V P +++ + +CG H +
Sbjct: 465 QLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTR------- 516
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 548
++++W +E P V V CG T LT +G
Sbjct: 517 -----NKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGK 571
Query: 549 VYTMGSPVYGQLG---------DPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAVL 595
V G + +LG + +A ++P L K + +A G H A +
Sbjct: 572 VLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAI 631
Query: 596 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA-LKDKQVKSIVCGTSFTAA 646
R + T+G G+LG G+ R +L+ L KQV + CG FT A
Sbjct: 632 DERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 683
Score = 211 (79.3 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 80/337 (23%), Positives = 141/337 (41%)
Query: 278 GGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GG G G K PK VE ++ ++CG VT +G+++++G + G
Sbjct: 417 GGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 476
Query: 337 LGHGVDS----DVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN-FGLL 391
+G VD +V P ++ N VE V+CG++H +T + ++Y+WG C +G L
Sbjct: 477 MG--VDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNKEVYSWG---CGEYGRL 531
Query: 392 GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRIS 451
G +E + P+K++ P + + + +V CG T ++T +G++ G F LG +S
Sbjct: 532 GLDSEEDYYTPQKVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMS 590
Query: 452 VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXX-GKLFTWXXXXXXXXXX 510
E T + V G G+L T+
Sbjct: 591 GIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGV 650
Query: 511 XXKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DP--KAN 566
+ RL + L +VSCG T+A T H++ G+ G+L P + +
Sbjct: 651 GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPH 710
Query: 567 GK-----LPTRVEGKLTKNFVEEIACGDYHVAVLTSR 598
G P + G L + V +++C +H ++ +
Sbjct: 711 GSDICTSWPRPIFGSL--HHVPDLSCRGWHTILIVEK 745
Score = 209 (78.6 bits), Expect = 9.6e-18, Sum P(3) = 9.6e-18
Identities = 53/172 (30%), Positives = 84/172 (48%)
Query: 308 QNIACGGRHAALVTKQGEVFSW-----GEELGGRLGHGVDSDVSHPKLIDALKNINVELV 362
+ + G H A+VT + E+++W G +L G+LGHG + PK ++ L+ + V
Sbjct: 391 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQV 450
Query: 363 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS--LWLPKKLNGPLEGIHVSSVSCG 420
+CG+ T VT G +Y +G +G +G + P +LN V VSCG
Sbjct: 451 SCGDDFTVCVTDEGQLYAFGSDY--YGCMGVDKVAGPEVLEPMQLNF-FSNNPVEQVSCG 507
Query: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
H V+T +++++G G +G LG TP++VD K L V CG
Sbjct: 508 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 559
Score = 188 (71.2 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 76/253 (30%), Positives = 108/253 (42%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG C G LG Y K+D VPKA+ +++ VQ CG L+T+
Sbjct: 520 VYSWG-CGEYGRLGLDSEED-YYTPQKVD--VPKAL---IIVAVQ---CGCDGTFLLTQS 569
Query: 324 GEVFSWG----EELG------GRLGHGVDSDVSHPKLIDALKNIN---VELVACGEHHTC 370
G+V + G +LG G + H +V + K ++ + VA G+ HT
Sbjct: 570 GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTA 629
Query: 371 AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 430
A+ G + T+G + C G LG GN L GPL G V VSCG T T
Sbjct: 630 AIDERGRLLTFGCNKC--GQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD 687
Query: 431 GQLFTFGDGTFGVLG-------HGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAVVEV 482
+F +G+G G L HG I S PR + SL + + +C WHT +VE
Sbjct: 688 NHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDL--SCRGWHTILIVEK 745
Query: 483 MVGXXXXXXXXXG 495
++ G
Sbjct: 746 VLNSKTIRSNSSG 758
Score = 106 (42.4 bits), Expect = 9.6e-18, Sum P(3) = 9.6e-18
Identities = 27/87 (31%), Positives = 38/87 (43%)
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV-EGKLTKNFVEEIACGDYH 591
V+ G + T A+ G + T G GQLG +L + G L V ++CGD
Sbjct: 621 VAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEF 680
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTD 618
T ++ WG G NGRL T+
Sbjct: 681 TIAATDDNHIFAWGNGGNGRLAMTPTE 707
Score = 41 (19.5 bits), Expect = 9.6e-18, Sum P(3) = 9.6e-18
Identities = 16/44 (36%), Positives = 17/44 (38%)
Query: 189 DKALSDAVLYAAPPKVLLPSESACGSVNS----LSSGGSDGRTG 228
D A AA VL E C S+NS S GG D G
Sbjct: 7 DTQAGPAAAAAAAMSVLGEYERHCDSLNSDFGSESGGGGDAGPG 50
Score = 38 (18.4 bits), Expect = 2.0e-17, Sum P(3) = 2.0e-17
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 42 FRLANDESILIWISGKEEKHLKLSHVSR 69
+R D+S+++W KE +LS R
Sbjct: 88 YRRTEDDSLVVW---KEVDLTRLSEKER 112
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 157 (60.3 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 302 AVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVEL 361
A L + + G HA L+ G+VFSWG G+LGHG P+L++AL+ + +
Sbjct: 156 APTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAE 215
Query: 362 VACGEHHTCAVTLSGDMYTWG 382
VA G H+ ++ +GD+Y WG
Sbjct: 216 VAAGGWHSVCLSETGDIYIWG 236
Score = 140 (54.3 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 30/70 (42%), Positives = 40/70 (57%)
Query: 584 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ--VKSIVCGT 641
+++CG H AVLT E+YTWG G G+LGH DT + P VE DKQ V+++ CG
Sbjct: 305 KVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQLQVRTVSCGP 364
Query: 642 SFTAAICLHK 651
T + K
Sbjct: 365 WNTYVYAVEK 374
Score = 140 (54.3 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 348 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 407
P L+D V+CG HT +T +G++YTWG +G LGH + +L P ++
Sbjct: 292 PALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGK--YGQLGHKDTTTLDRPCRVEY 349
Query: 408 PLEG-IHVSSVSCGPWHTAV 426
++ + V +VSCGPW+T V
Sbjct: 350 FVDKQLQVRTVSCGPWNTYV 369
Score = 135 (52.6 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 411 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL--KGLRTVR 468
G VSCG HTAV+T G+L+T+G G +G LGH D ++ P V+ K L+
Sbjct: 300 GSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQLQVRT 359
Query: 469 AACGVWHT 476
+CG W+T
Sbjct: 360 VSCGPWNT 367
Score = 125 (49.1 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 420 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
G H ++ +AGQ+F++G G G LGHG + PR +++L+GLR A G WH+ +
Sbjct: 167 GAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGGWHSVCL 226
Query: 480 VE 481
E
Sbjct: 227 SE 228
Score = 107 (42.7 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 365 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 424
G H + +G +++WG G LGHG + P+ L L+G+ ++ V+ G WH+
Sbjct: 167 GAEHALLLDAAGQVFSWGAGR--HGQLGHGTLEAEPEPRLLEA-LQGLRMAEVAAGGWHS 223
Query: 425 AVVTSAGQLFTFGDGTFGVL 444
++ G ++ +G G L
Sbjct: 224 VCLSETGDIYIWGWNESGQL 243
Score = 102 (41.0 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 27/71 (38%), Positives = 34/71 (47%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNF-VEEIACGD 589
+VSCG T LT TG +YT G YGQLG P RVE + K V ++CG
Sbjct: 305 KVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQLQVRTVSCGP 364
Query: 590 YHVAVLTSRTE 600
++ V E
Sbjct: 365 WNTYVYAVEKE 375
Score = 73 (30.8 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 15/61 (24%), Positives = 32/61 (52%)
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
G G H + ++ + P+ +E+ L + +A GG H+ +++ G+++ WG G+
Sbjct: 184 GAGRHGQLGHGTLEAEP-EPRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQ 242
Query: 337 L 337
L
Sbjct: 243 L 243
Score = 64 (27.6 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 380 TWGGSN-CNFG-LLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 433
TW G C FG LG G + P+ L P + V VS +TA VT G++
Sbjct: 8 TWFGFGFCGFGQALGSGLGRQVHSPEPLRTPGGSLGVCRVSASWSYTAFVTRGGRV 63
Score = 50 (22.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 441 FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 478
FG G G + R+V S + LRT + GV +A
Sbjct: 12 FGFCGFGQALGSGLGRQVHSPEPLRTPGGSLGVCRVSA 49
Score = 44 (20.5 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 455 PREVDSLKGLRTVRAACGVWHTAAV 479
P +D G V+ +CG HTA +
Sbjct: 292 PALLDLSPGSEAVKVSCGSRHTAVL 316
Score = 39 (18.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 531 CQVSCGHSLTVALTTTGHVYTMGS 554
C+VS S T +T G V G+
Sbjct: 45 CRVSASWSYTAFVTRGGRVQLSGA 68
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 235 (87.8 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 93/352 (26%), Positives = 146/352 (41%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN-INVELVACGEHHTCAVTLS 375
A + ++ EV+ WG GG+ S P+ +D +K+ + V G H VT+
Sbjct: 340 AVVTSRTSEVYVWG---GGK---------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387
Query: 376 GDMYTW----GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
++YTW GG+ + G LGHG++ S PK + L+G + VSCG T VT G
Sbjct: 388 KELYTWVNMQGGTKLH-GQLGHGDKASYRQPKHVE-KLQGKAIRQVSCGDDFTVCVTDEG 445
Query: 432 QLFTFGDGTFGVLGHGDRIS---VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
QL+ FG +G +G D+++ V P +++ + +CG H +
Sbjct: 446 QLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTR------- 497
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 548
++++W +E P V V CG T LT +G
Sbjct: 498 -----NKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGK 552
Query: 549 VYTMGSPVYGQLG---------DPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAVL 595
V G + +LG + +A ++P L K + IA G H A +
Sbjct: 553 VLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAI 612
Query: 596 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA-LKDKQVKSIVCGTSFTAA 646
R + T+G G+LG G+ R +L+ L KQV + CG FT A
Sbjct: 613 DERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 664
Score = 212 (79.7 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 54/172 (31%), Positives = 85/172 (49%)
Query: 308 QNIACGGRHAALVTKQGEVFSW-----GEELGGRLGHGVDSDVSHPKLIDALKNINVELV 362
+ + G H A+VT + E+++W G +L G+LGHG + PK ++ L+ + V
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQV 431
Query: 363 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS--LWLPKKLNGPLEGIHVSSVSCG 420
+CG+ T VT G +Y +G +G +G + P +LN L V VSCG
Sbjct: 432 SCGDDFTVCVTDEGQLYAFGSDY--YGCMGVDKVAGPEVLEPMQLNFFLSN-PVEQVSCG 488
Query: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
H V+T +++++G G +G LG TP++VD K L V CG
Sbjct: 489 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540
Score = 205 (77.2 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 80/338 (23%), Positives = 146/338 (43%)
Query: 278 GGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GG G G K PK VE ++ ++CG VT +G+++++G + G
Sbjct: 398 GGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457
Query: 337 LGHGVDSDVSHPKLIDALK-NI---N-VELVACGEHHTCAVTLSGDMYTWGGSNCN-FGL 390
+G VD V+ P++++ ++ N N VE V+CG++H +T + ++Y+WG C +G
Sbjct: 458 MG--VDK-VAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWG---CGEYGR 511
Query: 391 LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 450
LG +E + P+K++ P + + + +V CG T ++T +G++ G F LG +
Sbjct: 512 LGLDSEEDYYTPQKVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCM 570
Query: 451 SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXX-GKLFTWXXXXXXXXX 509
S E T + + G G+L T+
Sbjct: 571 SGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
Query: 510 XXXKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DP--KA 565
+ RL + L +VSCG T+A T H++ G+ G+L P +
Sbjct: 631 VGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERP 690
Query: 566 NGK-----LPTRVEGKLTKNFVEEIACGDYHVAVLTSR 598
+G P + G L + V +++C +H ++ +
Sbjct: 691 HGSDICTSWPRPIFGSL--HHVPDLSCRGWHTILIVEK 726
Score = 187 (70.9 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 75/253 (29%), Positives = 108/253 (42%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG C G LG Y K+D VPKA+ +++ VQ CG L+T+
Sbjct: 501 VYSWG-CGEYGRLGLDSEED-YYTPQKVD--VPKAL---IIVAVQ---CGCDGTFLLTQS 550
Query: 324 GEVFSWG----EELG------GRLGHGVDSDVSHPKLIDALKNIN---VELVACGEHHTC 370
G+V + G +LG G + H +V + K ++ + +A G+ HT
Sbjct: 551 GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTA 610
Query: 371 AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 430
A+ G + T+G + C G LG GN L GPL G V VSCG T T
Sbjct: 611 AIDERGRLLTFGCNKC--GQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD 668
Query: 431 GQLFTFGDGTFGVLG-------HGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAVVEV 482
+F +G+G G L HG I S PR + SL + + +C WHT +VE
Sbjct: 669 NHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDL--SCRGWHTILIVEK 726
Query: 483 MVGXXXXXXXXXG 495
++ G
Sbjct: 727 VLNSKTIRSNSSG 739
Score = 142 (55.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 71/267 (26%), Positives = 109/267 (40%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD---GT--FGVLGHGDRISVSTPR 456
P+KL+ G V G H AVVT +L+T+ + GT G LGHGD+ S P+
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418
Query: 457 EVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEAR 516
V+ L+G + +CG T V + G+L+ +
Sbjct: 419 HVEKLQGKAIRQVSCGDDFTVCVTD------------EGQLYAFGSDYYGCMGVDKVAGP 466
Query: 517 --LVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRV 573
L P + + QVSCG + V LT VY+ G YG+LG D + + P +V
Sbjct: 467 EVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKV 526
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG-----HGDTDDRNF---P-- 623
+ V + CG +LT +V G +LG G + + P
Sbjct: 527 DVPKALIIVA-VQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYT 585
Query: 624 ---SLVEALKDKQVKSIVCGTSFTAAI 647
+L + L ++++I G + TAAI
Sbjct: 586 TSFTLAKQLSFYKIRTIAPGKTHTAAI 612
Score = 105 (42.0 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 26/87 (29%), Positives = 38/87 (43%)
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV-EGKLTKNFVEEIACGDYH 591
++ G + T A+ G + T G GQLG +L + G L V ++CGD
Sbjct: 602 IAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEF 661
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTD 618
T ++ WG G NGRL T+
Sbjct: 662 TIAATDDNHIFAWGNGGNGRLAMTPTE 688
Score = 38 (18.4 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 42 FRLANDESILIWISGKEEKHLKLSHVSR 69
+R D+S+++W KE +LS R
Sbjct: 69 YRRTEDDSLVVW---KEVDLTRLSEKER 93
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 154 (59.3 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 302 AVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVEL 361
A L + + G HA L+ G+VFSWG G+LGHG P++++AL+ + +
Sbjct: 161 APTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAE 220
Query: 362 VACGEHHTCAVTLSGDMYTWG 382
VA G H+ V+ +GD+Y WG
Sbjct: 221 VAAGGWHSVCVSETGDIYIWG 241
Score = 143 (55.4 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 33/77 (42%), Positives = 43/77 (55%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 461
P L+ PL G SCG HTAVVT G+L+T+G G +G LGH D S+ P V+
Sbjct: 297 PALLDLPL-GSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYF 355
Query: 462 --KGLRTVRAACGVWHT 476
K L+ +CG W+T
Sbjct: 356 VDKQLQVRTVSCGPWNT 372
Score = 141 (54.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 348 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 407
P L+D + +CG HT VT +G++YTWG +G LGH + SL P ++
Sbjct: 297 PALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGK--YGQLGHKDTTSLDRPCRVEY 354
Query: 408 PLEG-IHVSSVSCGPWHTAV 426
++ + V +VSCGPW+T V
Sbjct: 355 FVDKQLQVRTVSCGPWNTYV 374
Score = 135 (52.6 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 586 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ--VKSIVCGTSF 643
+CG H AV+T E+YTWG G G+LGH DT + P VE DKQ V+++ CG
Sbjct: 312 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRTVSCGPWN 371
Query: 644 TAAICLHK 651
T + K
Sbjct: 372 TYVFAVEK 379
Score = 123 (48.4 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 420 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
G H ++ +AGQ+F++G G G LGHG + PR +++L+GL A G WH+ V
Sbjct: 172 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGGWHSVCV 231
Query: 480 VE 481
E
Sbjct: 232 SE 233
Score = 119 (46.9 bits), Expect = 0.00098, P = 0.00098
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL- 354
P ++ + D +CG RH A+VT+ GE+++WG G+LGH + + P ++
Sbjct: 297 PALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFV 356
Query: 355 -KNINVELVACGEHHT 369
K + V V+CG +T
Sbjct: 357 DKQLQVRTVSCGPWNT 372
Score = 115 (45.5 bits), Expect = 2.9e-13, Sum P(3) = 2.9e-13
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 365 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT 424
G H + +G +++WGG G LGHG + P+ L L+G+ ++ V+ G WH+
Sbjct: 172 GAEHALLLDAAGQVFSWGGGR--HGQLGHGTLEAEREPRVLEA-LQGLPMAEVAAGGWHS 228
Query: 425 AVVTSAGQLFTFGDGTFGVL 444
V+ G ++ +G G L
Sbjct: 229 VCVSETGDIYIWGWNESGQL 248
Score = 98 (39.6 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 25/71 (35%), Positives = 33/71 (46%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNF-VEEIACGD 589
+ SCG T +T TG +YT G YGQLG P RVE + K V ++CG
Sbjct: 310 KASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRTVSCGP 369
Query: 590 YHVAVLTSRTE 600
++ V E
Sbjct: 370 WNTYVFAVEKE 380
Score = 95 (38.5 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 588 GDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 640
G H +L + +V++WG G +G+LGHG + P ++EAL+ + + G
Sbjct: 172 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAG 224
Score = 84 (34.6 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GGG H + ++ + P+ +E+ L + +A GG H+ V++ G+++ WG G+
Sbjct: 189 GGGRHGQLGHGTLEAER-EPRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 247
Query: 337 L 337
L
Sbjct: 248 L 248
Score = 71 (30.1 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 20/55 (36%), Positives = 26/55 (47%)
Query: 381 WGGSN-CNFG-LLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 433
W G C FG LG G ++ P+ L P + V VS +TA VT G+L
Sbjct: 9 WFGFGFCGFGQALGSGRGRQVYSPEPLEVPGASLDVCRVSASWSYTATVTRGGRL 63
Score = 66 (28.3 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 19/69 (27%), Positives = 29/69 (42%)
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
G++F+W EA P + AL +V+ G +V ++ TG +Y G
Sbjct: 183 GQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGW 242
Query: 555 PVYGQLGDP 563
GQL P
Sbjct: 243 NESGQLALP 251
Score = 48 (22.0 bits), Expect = 4.4e-14, Sum P(3) = 4.4e-14
Identities = 25/84 (29%), Positives = 35/84 (41%)
Query: 268 GECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVF 327
G G G G G GS G ++ S P V A LDV ++ + A VT+ G +
Sbjct: 7 GAWFGFGFCGFG-QALGSGRGRQVYSPEPLEVPGAS-LDVCRVSASWSYTATVTRGGRLE 64
Query: 328 SWGEELGGRLGHGVDSDVSHPKLI 351
G + G G D+ S L+
Sbjct: 65 LSGS-VSGSAGGCRDAWASEALLV 87
Score = 47 (21.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 455 PREVDSLKGLRTVRAACGVWHTAAV 479
P +D G V+A+CG HTA V
Sbjct: 297 PALLDLPLGSDAVKASCGSRHTAVV 321
Score = 44 (20.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 531 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
C+VS S T +T G + GS V G G
Sbjct: 45 CRVSASWSYTATVTRGGRLELSGS-VSGSAG 74
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 242 (90.2 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 95/352 (26%), Positives = 146/352 (41%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN-INVELVACGEHHTCAVTLS 375
A + ++ EV+ WG GG+ S P+ +D +K+ + V G H VT+
Sbjct: 357 AVVTSRTSEVYVWG---GGK---------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 404
Query: 376 GDMYTW----GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
++YTW GG+ + G LGHG++ S PK + L+G + VSCG T VT G
Sbjct: 405 KELYTWVNMQGGTKLH-GQLGHGDKASYRQPKHVE-KLQGKAIRQVSCGDDFTVCVTDEG 462
Query: 432 QLFTFGDGTFGVLGHGDRIS---VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
QL+ FG +G +G D+++ V P ++D + +CG H +
Sbjct: 463 QLYAFGSDYYGCMGV-DKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVVLTR------- 514
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 548
++++W +E P V V CG T LT +G
Sbjct: 515 -----NKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGK 569
Query: 549 VYTMGSPVYGQLG---------DPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAVL 595
V G + +LG + +A ++P L K + IA G H A L
Sbjct: 570 VLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAL 629
Query: 596 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA-LKDKQVKSIVCGTSFTAA 646
R + T+G G+LG G+ R +L+ L KQV + CG FT A
Sbjct: 630 DERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 681
Score = 208 (78.3 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 53/172 (30%), Positives = 85/172 (49%)
Query: 308 QNIACGGRHAALVTKQGEVFSW-----GEELGGRLGHGVDSDVSHPKLIDALKNINVELV 362
+ + G H A+VT + E+++W G +L G+LGHG + PK ++ L+ + V
Sbjct: 389 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQV 448
Query: 363 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL--PKKLNGPLEGIHVSSVSCG 420
+CG+ T VT G +Y +G +G +G + P +L+ L V VSCG
Sbjct: 449 SCGDDFTVCVTDEGQLYAFGSDY--YGCMGVDKVAGAEVLEPMQLDFFLSN-PVEQVSCG 505
Query: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
H V+T +++++G G +G LG TP++VD K L V CG
Sbjct: 506 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 557
Score = 203 (76.5 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 69/289 (23%), Positives = 121/289 (41%)
Query: 278 GGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GG G G K PK VE ++ ++CG VT +G+++++G + G
Sbjct: 415 GGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 474
Query: 337 LGHG--VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN-FGLLGH 393
+G ++V P +D + VE V+CG++H +T + ++Y+WG C +G LG
Sbjct: 475 MGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVVLTRNKEVYSWG---CGEYGRLGL 531
Query: 394 GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 453
+E + P+K++ P + + + +V CG T ++T +G++ G F LG +S
Sbjct: 532 DSEEDYYTPQKVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGI 590
Query: 454 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXX-GKLFTWXXXXXXXXXXXX 512
E T + + G G+L T+
Sbjct: 591 INHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLGVGN 650
Query: 513 KEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 560
+ RL + L +VSCG T+A T H++ G+ G+L
Sbjct: 651 YKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 699
Score = 178 (67.7 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 74/253 (29%), Positives = 108/253 (42%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG C G LG Y K+D VPKA+ +++ VQ CG L+T+
Sbjct: 518 VYSWG-CGEYGRLGLDSEED-YYTPQKVD--VPKAL---IIVAVQ---CGCDGTFLLTQS 567
Query: 324 GEVFSWG----EELG------GRLGHGVDSDVSHPKLIDALKNIN---VELVACGEHHTC 370
G+V + G +LG G + H +V + K ++ + +A G+ HT
Sbjct: 568 GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTA 627
Query: 371 AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 430
A+ G + T+G + C G LG GN L GPL G V VSCG T T
Sbjct: 628 ALDERGRLLTFGCNKC--GQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD 685
Query: 431 GQLFTFGDGTFGVLG-------HGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAVVEV 482
+F +G+G G L HG I S PR + SL + + +C W+T +VE
Sbjct: 686 NHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDL--SCRGWNTILIVEK 743
Query: 483 MVGXXXXXXXXXG 495
++ G
Sbjct: 744 VLNSKTIRSNSSG 756
Score = 107 (42.7 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 27/87 (31%), Positives = 38/87 (43%)
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV-EGKLTKNFVEEIACGDYH 591
++ G + T AL G + T G GQLG +L + G L V ++CGD
Sbjct: 619 IAPGKTHTAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEF 678
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTD 618
T ++ WG G NGRL T+
Sbjct: 679 TIAATDDNHIFAWGNGGNGRLAMTPTE 705
Score = 40 (19.1 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 19/68 (27%), Positives = 30/68 (44%)
Query: 5 GAAAAPVERDIELAITALKKGAHLLKYGRRGKPKFCP---FRLANDESILIWISGKEEKH 61
G +A PV R A A ++ H + G+ F +R D+S+++W KE
Sbjct: 47 GPSAGPVPRASGGA--AEQEELHYIPIRVLGRGAFGEATLYRRTEDDSLVVW---KEVDL 101
Query: 62 LKLSHVSR 69
+LS R
Sbjct: 102 TRLSEKER 109
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 238 (88.8 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 94/352 (26%), Positives = 146/352 (41%)
Query: 317 AALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN-INVELVACGEHHTCAVTLS 375
A + ++ EV+ WG GG+ S P+ +D +K+ + V G H VT+
Sbjct: 340 AVVTSRTSEVYVWG---GGK---------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387
Query: 376 GDMYTW----GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
++YTW GG+ + G LGHG++ S PK + L+G + VSCG T VT G
Sbjct: 388 KELYTWVNMQGGTKLH-GQLGHGDKASYRQPKHVE-KLQGKAIHQVSCGDDFTVCVTDEG 445
Query: 432 QLFTFGDGTFGVLGHGDRIS---VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
QL+ FG +G +G D++S V P +++ + +CG H +
Sbjct: 446 QLYAFGSDYYGCMGV-DKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTR------- 497
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 548
++++W +E P V V CG T LT +G
Sbjct: 498 -----NKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGK 552
Query: 549 VYTMGSPVYGQLG---------DPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAVL 595
V G + +LG + +A ++P L K + IA G H A +
Sbjct: 553 VLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAI 612
Query: 596 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA-LKDKQVKSIVCGTSFTAA 646
R + T+G G+LG G+ R +L+ L KQV + CG FT A
Sbjct: 613 DERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 664
Score = 211 (79.3 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 54/172 (31%), Positives = 84/172 (48%)
Query: 308 QNIACGGRHAALVTKQGEVFSW-----GEELGGRLGHGVDSDVSHPKLIDALKNINVELV 362
+ + G H A+VT + E+++W G +L G+LGHG + PK ++ L+ + V
Sbjct: 372 RQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQV 431
Query: 363 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS--LWLPKKLNGPLEGIHVSSVSCG 420
+CG+ T VT G +Y +G +G +G + P +LN L V VSCG
Sbjct: 432 SCGDDFTVCVTDEGQLYAFGSDY--YGCMGVDKVSGPEVLEPMQLNFFLSN-PVEQVSCG 488
Query: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
H V+T +++++G G +G LG TP+ VD K L V CG
Sbjct: 489 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCG 540
Score = 204 (76.9 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 80/338 (23%), Positives = 145/338 (42%)
Query: 278 GGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GG G G K PK VE + ++CG VT +G+++++G + G
Sbjct: 398 GGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457
Query: 337 LGHGVDSDVSHPKLIDALK-NI---N-VELVACGEHHTCAVTLSGDMYTWGGSNCN-FGL 390
+G VD VS P++++ ++ N N VE V+CG++H +T + ++Y+WG C +G
Sbjct: 458 MG--VDK-VSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWG---CGEYGR 511
Query: 391 LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRI 450
LG +E + P++++ P + + + +V CG T ++T +G++ G F LG +
Sbjct: 512 LGLDSEEDYYTPQRVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCM 570
Query: 451 SVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXX-GKLFTWXXXXXXXXX 509
S E T + + G G+L T+
Sbjct: 571 SGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
Query: 510 XXXKEARL-VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DP--KA 565
+ RL + L +VSCG T+A T H++ G+ G+L P +
Sbjct: 631 VGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERP 690
Query: 566 NGK-----LPTRVEGKLTKNFVEEIACGDYHVAVLTSR 598
+G P + G L + V +++C +H ++ +
Sbjct: 691 HGSDICTSWPRPIFGSL--HHVPDLSCRGWHTILIVEK 726
Score = 184 (69.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 66/237 (27%), Positives = 100/237 (42%)
Query: 284 GSYAGVKMDS----FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG----EELG- 334
G Y + +DS + P+ V+ L + + CG L+T+ G+V + G +LG
Sbjct: 507 GEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGL 566
Query: 335 -----GRLGHGVDSDVSHPKLIDALKNIN---VELVACGEHHTCAVTLSGDMYTWGGSNC 386
G + H +V + K ++ + +A G+ HT A+ G + T+G + C
Sbjct: 567 NQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKC 626
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG- 445
G LG GN L GPL G V VSCG T T +F +G+G G L
Sbjct: 627 --GQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM 684
Query: 446 ------HGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXG 495
HG I S PR + SL + + +C WHT +VE ++ G
Sbjct: 685 TPTERPHGSDICTSWPRPIFGSLHHVPDL--SCRGWHTILIVEKVLNSKTIRSNSSG 739
Score = 146 (56.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 72/267 (26%), Positives = 109/267 (40%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD---GT--FGVLGHGDRISVSTPR 456
P+KL+ G V G H AVVT +L+T+ + GT G LGHGD+ S P+
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418
Query: 457 EVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEAR 516
V+ L+G + +CG T V + G+L+ +
Sbjct: 419 HVEKLQGKAIHQVSCGDDFTVCVTD------------EGQLYAFGSDYYGCMGVDKVSGP 466
Query: 517 --LVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRV 573
L P + + QVSCG + V LT VY+ G YG+LG D + + P RV
Sbjct: 467 EVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRV 526
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG-----HGDTDDRNF---P-- 623
+ V + CG +LT +V G +LG G + + P
Sbjct: 527 DVPKALIIVA-VQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYT 585
Query: 624 ---SLVEALKDKQVKSIVCGTSFTAAI 647
+L + L ++++I G + TAAI
Sbjct: 586 TSFTLAKQLSFYKIRTIAPGKTHTAAI 612
Score = 105 (42.0 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 26/87 (29%), Positives = 38/87 (43%)
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRV-EGKLTKNFVEEIACGDYH 591
++ G + T A+ G + T G GQLG +L + G L V ++CGD
Sbjct: 602 IAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEF 661
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTD 618
T ++ WG G NGRL T+
Sbjct: 662 TIAATDDNHIFAWGNGGNGRLAMTPTE 688
Score = 38 (18.4 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 42 FRLANDESILIWISGKEEKHLKLSHVSR 69
+R D+S+++W KE +LS R
Sbjct: 69 YRRTEDDSLVVW---KEVDLTRLSEKER 93
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 248 (92.4 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 90/317 (28%), Positives = 139/317 (43%)
Query: 349 KLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNG 407
+ ++ + ++ VACG+ T +T G + T+G GSN G LGHG+ + P +
Sbjct: 374 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSN---GCLGHGSLNDISQPTIVEA 430
Query: 408 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 467
L G + V+CG H +++ +LF +G G G LG G R S P+ V G
Sbjct: 431 LL-GYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQ 489
Query: 468 RAACGVWHTAAVVEVMVGXXXXXXXXXGKLFT--WXXXXXXXXXXXXKEA-RLVPTCVAA 524
R CG+ ++ ++ V KL +EA P A
Sbjct: 490 RVVCGI-DSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAP 548
Query: 525 LVEPNFCQVSCGHSLTVALTT-TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE 583
L + V G + + A+T +G YT GS + + + P RV+G L +
Sbjct: 549 LDQEPLLSVDLGTAHSAAVTXASGDCYTFGS-------NARRVSRAPCRVQG-LQGIKIS 600
Query: 584 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ--VKSIVCGT 641
+ACGD + + EV++WGKGA GRLG D +D P V+ + V S+ C
Sbjct: 601 TVACGDAFTVAIGAEGEVFSWGKGARGRLGRKD-EDAGLPRPVQLDETHPYTVTSVSCCH 659
Query: 642 SFTA-AICLHKWVSGVD 657
T A+ +WV GV+
Sbjct: 660 GNTLLAVRRPEWV-GVE 675
Score = 239 (89.2 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 81/329 (24%), Positives = 137/329 (41%)
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GGG G+ + FV + +E + ++++ACG A +T +G + ++G G
Sbjct: 355 GGGALLPGAIEQPQ-PQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGC 413
Query: 337 LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 396
LGHG +D+S P +++AL + VACG H A++ +++ WG + G LG G
Sbjct: 414 LGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDG--GRLGLGTR 471
Query: 397 MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--- 453
S P+ + P G V CG + ++T GQ G F LG D +S+
Sbjct: 472 ESHCCPQLVPMP-PGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGL-DPLSLGEEP 529
Query: 454 TP-REVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXX 512
P ++V+ + +A V++ G +T+
Sbjct: 530 APHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNA-------- 581
Query: 513 KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTR 572
+ P V L V+CG + TVA+ G V++ G G+LG + LP
Sbjct: 582 RRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRP 641
Query: 573 VEGKLTKNF-VEEIACGDYHVAVLTSRTE 600
V+ T + V ++C + + R E
Sbjct: 642 VQLDETHPYTVTSVSCCHGNTLLAVRRPE 670
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 203 (76.5 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 49/177 (27%), Positives = 92/177 (51%)
Query: 310 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 369
IACG H +++ G++ +WG G+ G G +++ +D +E +ACG+ H+
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGDWPA-IEKIACGQFHS 839
Query: 370 CAVTLSGDMYTWGGSNCNFGLLGHG--NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 427
+ G ++T+G +G LGHG N + +P ++NG + V+ ++CG HT V+
Sbjct: 840 AFICSDGSLWTFGWGV--WGQLGHGGRNNSNQLVPTRVNGLI--CKVTQIACGRAHTVVL 895
Query: 428 TSAGQLFTFGDGTFGVLGHGD---RISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
T G++ G G++G +G D ++ TP + L+ +R + A +H+ + E
Sbjct: 896 TDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR-VRDI--ATHYYHSICITE 949
Score = 190 (71.9 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 62/208 (29%), Positives = 89/208 (42%)
Query: 401 LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS 460
LP+ L P G +++CG H V++S+GQL +G FG G G ++ +VD
Sbjct: 767 LPRVLEYP--GGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDG 824
Query: 461 LKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFT--WXXXXXXXXXXXXKEARLV 518
+ ACG +H+A + G L+T W +LV
Sbjct: 825 -DWPAIEKIACGQFHSAFICS------------DGSLWTFGWGVWGQLGHGGRNNSNQLV 871
Query: 519 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLT 578
PT V L+ Q++CG + TV LT TG V GS YGQ+G K+ L
Sbjct: 872 PTRVNGLI-CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLG 930
Query: 579 KNFVEEIACGDYHVAVLTSRTEVYTWGK 606
V +IA YH +T V+ WG+
Sbjct: 931 PLRVRDIATHYYHSICITEDNRVFEWGR 958
Score = 145 (56.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 31/90 (34%), Positives = 53/90 (58%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI---DALKNINVELV 362
++ ++ACG H+AL+T +G +++WG+ L +LGHG ++ P + + K +NV L
Sbjct: 1023 NIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSL- 1081
Query: 363 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLG 392
G +HT A T G ++ WG ++ FG G
Sbjct: 1082 --GNNHTIASTDDGSVFAWGKND--FGQCG 1107
Score = 144 (55.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 40/125 (32%), Positives = 61/125 (48%)
Query: 528 PNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK---LPTRVEGKLTKNFVEE 584
P +++CG + + + G ++T G V+GQLG N +PTRV G + K V +
Sbjct: 827 PAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICK--VTQ 884
Query: 585 IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 644
IACG H VLT V G G+ G++G D + F L +V+ I T +
Sbjct: 885 IACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIA--THYY 942
Query: 645 AAICL 649
+IC+
Sbjct: 943 HSICI 947
Score = 132 (51.5 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 37/134 (27%), Positives = 68/134 (50%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVAC 364
++ IACG H+A + G ++++G + G+LGHG ++ + P ++ L V +AC
Sbjct: 829 IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI-CKVTQIAC 887
Query: 365 GEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 423
G HT +T +G + G GS G+ ++ + P L GPL V ++ +H
Sbjct: 888 GRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPL-GPLR---VRDIATHYYH 943
Query: 424 TAVVTSAGQLFTFG 437
+ +T ++F +G
Sbjct: 944 SICITEDNRVFEWG 957
Score = 118 (46.6 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 409 LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVR 468
L+G ++ SV+CG H+A++TS G L+T+G G LGHG++ P +V G + V
Sbjct: 1020 LDG-NIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVN 1078
Query: 469 AACGVWHTAA 478
+ G HT A
Sbjct: 1079 VSLGNNHTIA 1088
Score = 116 (45.9 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 563 PKANGKLPTRVE----G-KLTKNFVE----EIACGDYHVAVLTSRTEVYTWGKGANGRLG 613
P+ N LP + G + K+F++ +ACG H A++TS +YTWGKG + +LG
Sbjct: 996 PRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLG 1055
Query: 614 HGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
HG+ ++R P V + ++ G + T A
Sbjct: 1056 HGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIA 1088
Score = 101 (40.6 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 27/93 (29%), Positives = 44/93 (47%)
Query: 522 VAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKN 580
V ++ N V+CG S + +T+ G +YT G + QLG N ++ P +V
Sbjct: 1016 VKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAK 1075
Query: 581 FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 613
+V ++ G+ H T V+ WGK G+ G
Sbjct: 1076 WVN-VSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 97 (39.2 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 47/187 (25%), Positives = 71/187 (37%)
Query: 207 PSESACGSVNSL---SSGGSDGRTGHLKGLSG--DTFRVXXXXXXXXXXXXXXXXXXXXX 261
P ACG+ + L SSG G+ G G +FR+
Sbjct: 778 PRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGDWPAIEKIACGQF 837
Query: 262 XXVFIWGECTGDGIL---GGGIHRSGSYAGVK-MDSFVPKAVESAVVLDVQNIACGGRHA 317
FI C+ DG L G G+ + G + VP V + ++ V IACG H
Sbjct: 838 HSAFI---CS-DGSLWTFGWGVWGQLGHGGRNNSNQLVPTRV-NGLICKVTQIACGRAHT 892
Query: 318 ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK--NINVELVACGEHHTCAVTLS 375
++T G V G G++G VD D+ L + V +A +H+ +T
Sbjct: 893 VVLTDTGRVLVCGSGSYGQMG--VDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITED 950
Query: 376 GDMYTWG 382
++ WG
Sbjct: 951 NRVFEWG 957
Score = 93 (37.8 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 38/130 (29%), Positives = 55/130 (42%)
Query: 445 GHGDRISVSTPREV--DSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXX-GKLFTWX 501
G R++++ P E+ + L GLR V+ + +V V G G L+TW
Sbjct: 993 GSTPRVNLNLPAEIPREDL-GLREVKH----FLDGNIVSVACGLSHSALITSEGTLYTWG 1047
Query: 502 XXXXXXXXXXXKEARLVPTCVAALVEPN---FCQVSCGHSLTVALTTTGHVYTMGSPVYG 558
K R+ P V EPN + VS G++ T+A T G V+ G +G
Sbjct: 1048 KGLDYQLGHGNKNERMEPHQV---FEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFG 1104
Query: 559 QLGD-PKANG 567
Q G K NG
Sbjct: 1105 QCGVLTKKNG 1114
Score = 51 (23.0 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 626 VEALKDKQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSG 663
V+ D + S+ CG S +A I L+ W G+D + G
Sbjct: 1016 VKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHG 1057
Score = 37 (18.1 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 812 TKKFFSASLPGSRIM 826
TKKFF + G R M
Sbjct: 1120 TKKFFFQARDGRRFM 1134
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 155 (59.6 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 305 LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC 364
L V+ + G H L+ G+VFSWG G+LGHG P+L++AL+ + + VA
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAA 220
Query: 365 GEHHTCAVTLSGDMYTWG 382
G H+ ++ +GD+Y WG
Sbjct: 221 GGWHSVCLSETGDIYIWG 238
Score = 141 (54.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 348 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNG 407
P L+D + + +CG HT VT +G++YTWG +G LGH + SL P +
Sbjct: 292 PALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGK--YGQLGHKDSTSLDRPCCVEY 349
Query: 408 PLEG-IHVSSVSCGPWHTAV 426
+E + V +V+CGPW+T V
Sbjct: 350 FVERQLEVRAVTCGPWNTYV 369
Score = 134 (52.2 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 34/77 (44%), Positives = 44/77 (57%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS- 460
P L+ PL G SCG HTAVVT G+L+T+G G +G LGH D S+ P V+
Sbjct: 292 PALLDLPL-GSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYF 350
Query: 461 LKGLRTVRAA-CGVWHT 476
++ VRA CG W+T
Sbjct: 351 VERQLEVRAVTCGPWNT 367
Score = 131 (51.2 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 471
+ V + G H ++ +AGQ+F++G G G LGHG + PR +++L+GLR + A
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAA 220
Query: 472 GVWHTAAVVE 481
G WH+ + E
Sbjct: 221 GGWHSVCLSE 230
Score = 125 (49.1 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 586 ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ--VKSIVCG 640
+CG H AV+T E+YTWG G G+LGH D+ + P VE ++Q V+++ CG
Sbjct: 307 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCG 363
Score = 113 (44.8 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 23/88 (26%), Positives = 43/88 (48%)
Query: 357 INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSS 416
+ V + G H + +G +++WG G LGHG + L +L L+G+ ++
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGR--HGQLGHGT-LEAELEPRLLEALQGLRMAK 217
Query: 417 VSCGPWHTAVVTSAGQLFTFGDGTFGVL 444
V+ G WH+ ++ G ++ +G G L
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNESGQL 245
Score = 108 (43.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 582 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 640
V ++ G HV +L + +V++WG G +G+LGHG + P L+EAL+ ++ + G
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAG 221
Score = 84 (34.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 22/63 (34%), Positives = 30/63 (47%)
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNF-VEEIACGDYH 591
SCG T +T TG +YT G YGQLG + P VE + + V + CG ++
Sbjct: 307 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCGPWN 366
Query: 592 VAV 594
V
Sbjct: 367 TYV 369
Score = 83 (34.3 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 28/99 (28%), Positives = 43/99 (43%)
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
G++F+W EA L P + AL +V+ G +V L+ TG +Y G
Sbjct: 180 GQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGW 239
Query: 555 PVYGQLGDPKANG---KLPTRVEGKLTKNFV-EEIACGD 589
GQL P +G K +L ++ + EE+A D
Sbjct: 240 NESGQLALPTRSGTENKAEREEATELNEDGLKEELAVAD 278
Score = 79 (32.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 270 CTGDGILGGGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFS 328
C + G R G G P+ +E+ L + +A GG H+ +++ G+++
Sbjct: 177 CAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYI 236
Query: 329 WGEELGGRL 337
WG G+L
Sbjct: 237 WGWNESGQL 245
Score = 62 (26.9 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 381 WGGSN-CNFG-LLGHGNEM-SLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 433
W G C FG LG GN S++ P+ L+ + + VS G +TA+VT G++
Sbjct: 9 WFGFGFCGFGQALGSGNSHHSVYSPEPLHASDD---ICQVSAGWSYTALVTRGGRV 61
Score = 53 (23.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 529 NFCQVSCGHSLTVALTTTGHVYTMGS 554
+ CQVS G S T +T G V GS
Sbjct: 41 DICQVSAGWSYTALVTRGGRVELSGS 66
Score = 49 (22.3 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 23/84 (27%), Positives = 29/84 (34%)
Query: 455 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKE 514
P +D G V A+CG HTA V G+L+TW
Sbjct: 292 PALLDLPLGSDAVMASCGSRHTAVVTRT------------GELYTWGWGKYGQLGHKDST 339
Query: 515 ARLVPTCVAALVEPNF--CQVSCG 536
+ P CV VE V+CG
Sbjct: 340 SLDRPCCVEYFVERQLEVRAVTCG 363
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 238 (88.8 bits), Expect = 8.8e-17, P = 8.8e-17
Identities = 102/374 (27%), Positives = 159/374 (42%)
Query: 292 DSFVPKAVESAVVLD-VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 350
D P+ VES + + ++ + GG H+AL++ GE+ G+ G+LG G ++ +
Sbjct: 57 DQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQNHKGQLGLGHTLEIMTFQT 116
Query: 351 IDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPL 409
V+ V+CG T + L+GD GSN FG LG E + L L
Sbjct: 117 CPLPGFGRVQQVSCGWDFT--IILTGDGLVLACGSNA-FGQLGVSAEKTHSAEPLL---L 170
Query: 410 EGIH--VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 467
+ H V+SV+ G H T++G ++ +G G + H R+ P+ V S +
Sbjct: 171 KSFHEPVTSVAAGLRHALASTASGCVYQWGTG---LSSHAKRML--NPQPVPSHLSSKEP 225
Query: 468 RAACGVWHTAAVVEVMVGXXXXX-XXXXGKLFTWXXXXXXXXXXXXKEARLVPTCV--AA 524
G H +V+ G G+LF W L P + +
Sbjct: 226 CLVPGFAHVTTQ-KVIAGSAHCACLTVNGELFLWGSNKHGQLISGSLFLPL-PVALDRSM 283
Query: 525 LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTR-VEGKLTKNFVE 583
L + V G + VA T +G V+T G YGQLG + N + + + L ++ VE
Sbjct: 284 LQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLG--QTNHSMEKQSCDEHLVRSPVE 341
Query: 584 --------EIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQV 634
+I+CG H +AV+ R V++WG +G G G D P + AL D
Sbjct: 342 VKALFGATQISCGSEHNLAVVGGR--VFSWGWNEHGMCGDGSLQDITQPQPIPALADAVA 399
Query: 635 KSIVCGTSFTAAIC 648
I CG + A+C
Sbjct: 400 LLIGCGAGHSMALC 413
Score = 187 (70.9 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 83/335 (24%), Positives = 134/335 (40%)
Query: 326 VFSWGEELGGRLGHGVDSDVSHPKLIDA-LKNINVELVACGEHHTCAVTLSGDMYTWGGS 384
+++WG G+LG G D + P+ +++ L+ + V G H+ ++ SG++ G +
Sbjct: 39 LYTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQN 98
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCGPWH-TAVVTSAGQLFTFGDGTFG 442
+ G LG G+ + + + PL G V VSCG W T ++T G + G FG
Sbjct: 99 HK--GQLGLGHTLEIMTFQTC--PLPGFGRVQQVSCG-WDFTIILTGDGLVLACGSNAFG 153
Query: 443 VLG-HGDRISVSTPREVDSLKGLRTVRAACGVWHT-AAVVEVMVGXXXXXXXXXGKLFTW 500
LG ++ + P + S T AA G+ H A+ V K
Sbjct: 154 QLGVSAEKTHSAEPLLLKSFHEPVTSVAA-GLRHALASTASGCVYQWGTGLSSHAKRML- 211
Query: 501 XXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQL 560
KE LVP + +V G + LT G ++ GS +GQL
Sbjct: 212 -NPQPVPSHLSSKEPCLVPGFAHVTTQ----KVIAGSAHCACLTVNGELFLWGSNKHGQL 266
Query: 561 GDPKANGKLPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLG---HG- 615
LP ++ + ++ V ++ G H+ T V+TWG+ G+LG H
Sbjct: 267 ISGSLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSM 326
Query: 616 ---DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
D+ S VE I CG+ A+
Sbjct: 327 EKQSCDEHLVRSPVEVKALFGATQISCGSEHNLAV 361
Score = 181 (68.8 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 56/197 (28%), Positives = 86/197 (43%)
Query: 291 MDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKL 350
+ S P V + Q + G H A +T GE+F WG G+L G + P
Sbjct: 220 LSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQLISG-SLFLPLPVA 278
Query: 351 IDA--LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG---HGNEMSLWLPKKL 405
+D L++ V V G H A T SG ++TWG SN +G LG H E +
Sbjct: 279 LDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSN--YGQLGQTNHSMEKQSCDEHLV 336
Query: 406 NGPLEG---IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK 462
P+E + +SCG H V G++F++G G+ G G ++ P+ + +L
Sbjct: 337 RSPVEVKALFGATQISCGSEHNLAVVG-GRVFSWGWNEHGMCGDGSLQDITQPQPIPALA 395
Query: 463 GLRTVRAACGVWHTAAV 479
+ CG H+ A+
Sbjct: 396 DAVALLIGCGAGHSMAL 412
Score = 148 (57.2 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 86/313 (27%), Positives = 120/313 (38%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN--VELVAC 364
VQ ++CG ++T G V + G G+LG + S L+ LK+ + V VA
Sbjct: 125 VQQVSCGWDFTIILTGDGLVLACGSNAFGQLGVSAEKTHSAEPLL--LKSFHEPVTSVAA 182
Query: 365 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEM--SLWLPKKLNG--P--LEGI-HVSS- 416
G H A T SG +Y WG GL H M +P L+ P + G HV++
Sbjct: 183 GLRHALASTASGCVYQWGT-----GLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQ 237
Query: 417 -VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS--LKGLRTVRAACGV 473
V G H A +T G+LF +G G L G + + P +D L+ R G
Sbjct: 238 KVIAGSAHCACLTVNGELFLWGSNKHGQLISGS-LFLPLPVALDRSMLQDERVSDVHSGW 296
Query: 474 WHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXX----XXXXXXKEA---RLV--PTCVAA 524
H A E G++FTW K++ LV P V A
Sbjct: 297 THLVAQTE------------SGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLVRSPVEVKA 344
Query: 525 LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEE 584
L Q+SCG +A+ G V++ G +G GD + L
Sbjct: 345 LFGAT--QISCGSEHNLAVVG-GRVFSWGWNEHGMCGDGSLQDITQPQPIPALADAVALL 401
Query: 585 IACGDYHVAVLTS 597
I CG H L S
Sbjct: 402 IGCGAGHSMALCS 414
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 243 (90.6 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 81/284 (28%), Positives = 125/284 (44%)
Query: 349 KLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNG 407
+ ++ + ++ VACG+ T +T G + T+G GSN G LGHG+ + P +
Sbjct: 378 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSN---GCLGHGSLNDISQPTIVEA 434
Query: 408 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTV 467
L G + V+CG H +++ +LF +G G G LG G R S P+ V G
Sbjct: 435 LL-GYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQ 493
Query: 468 RAACGVWHTAAVVEVMVGXXXXXXXXXGKLFT--WXXXXXXXXXXXXKEA-RLVPTCVAA 524
R CG+ ++ ++ V KL +EA P A
Sbjct: 494 RVVCGI-DSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAP 552
Query: 525 LVEPNFCQVSCGHSLTVALTT-TGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE 583
L + V G + + A+T +G YT GS + + + P RV+G L +
Sbjct: 553 LDQEPLLSVDLGTAHSAAVTXASGDCYTFGS-------NARRVSRAPCRVQG-LQGIKIS 604
Query: 584 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE 627
+ACGD + + EV++WGKGA GRLG D +D P V+
Sbjct: 605 TVACGDAFTVAIGAEGEVFSWGKGARGRLGRKD-EDAGLPRPVQ 647
Score = 238 (88.8 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 79/316 (25%), Positives = 133/316 (42%)
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
GGG G+ + FV + +E + ++++ACG A +T +G + ++G G
Sbjct: 359 GGGALLPGAIEQPQ-PQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGC 417
Query: 337 LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 396
LGHG +D+S P +++AL + VACG H A++ +++ WG + G LG G
Sbjct: 418 LGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDG--GRLGLGTR 475
Query: 397 MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS--- 453
S P+ + P G V CG + ++T GQ G F LG D +S+
Sbjct: 476 ESHCCPQLVPMP-PGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGL-DPLSLGEEP 533
Query: 454 TP-REVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXX 512
P ++V+ + +A V++ G +T+
Sbjct: 534 APHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNA-------- 585
Query: 513 KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTR 572
+ P V L V+CG + TVA+ G V++ G G+LG + LP
Sbjct: 586 RRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRP 645
Query: 573 VEGKLTKNF-VEEIAC 587
V+ T + V ++C
Sbjct: 646 VQLDETHPYTVTSVSC 661
Score = 207 (77.9 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 69/252 (27%), Positives = 107/252 (42%)
Query: 411 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA 470
G+ + V+CG TA +T G + TFG G+ G LGHG +S P V++L G V+ A
Sbjct: 385 GVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVA 444
Query: 471 CGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNF 530
CG H A+ +LF W +E+ P V
Sbjct: 445 CGASHVLAL------------STERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEA 492
Query: 531 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPT---RVEGKLT-------- 578
+V CG ++ LT G GS + +LG DP + G+ P +VE +T
Sbjct: 493 QRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAP 552
Query: 579 --KNFVEEIACGDYHVAVLTSRT-EVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK 635
+ + + G H A +T + + YT+G A R+ P V+ L+ ++
Sbjct: 553 LDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNAR-RVSRA-------PCRVQGLQGIKIS 604
Query: 636 SIVCGTSFTAAI 647
++ CG +FT AI
Sbjct: 605 TVACGDAFTVAI 616
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 236 (88.1 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 103/368 (27%), Positives = 161/368 (43%)
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTL 374
H + T+ G V + G+ G+LG G + P L+ L+++ V+ A G H C +
Sbjct: 27 HRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV-VQAEAGGMHTVC-LNQ 84
Query: 375 SGDMYTWGGSNCNF-GLLGHGN--EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
SG +Y++G CN G LG E S +P K+ L+ V VS G HTA +T G
Sbjct: 85 SGQVYSFG---CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAALTEDG 138
Query: 432 QLFTFGD--GTFGVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
++F +G GV+G + + S P +V + V+ A G H ++
Sbjct: 139 RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DMPVVKVASGNDHLV-MLTTDGDLYT 195
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCV-----AALVEPNFCQVSCGHSLTVAL 543
G+L E LVP CV + F CG LT A+
Sbjct: 196 LGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAI 255
Query: 544 TTTGHVYTMGSPVYGQLGDP-KANGKLPTRVEG--KLTKNFVEEIACGDYHVAVLTSRTE 600
+ GHVY G Y QLG P A+ +P + TK++V + G +H + S +
Sbjct: 256 SREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVG-FSGGQHHTICMDSEGK 314
Query: 601 VYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG 655
Y+ G+ GRLG G+ ++++ P+L+ L V S+ CG S A+ + W G
Sbjct: 315 AYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAVSKDGRVFAWGMG 372
Query: 656 VDQSMCSG 663
+ + +G
Sbjct: 373 TNYQLGTG 380
Score = 149 (57.5 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV--A 363
DV GG H + + G+V+S+G G LG D+ V +++ + ++V +
Sbjct: 68 DVVQAEAGGMHTVCLNQSGQVYSFGCNDEGALGR--DTSVEGSEMVPGKVELQEKVVQVS 125
Query: 364 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPW 422
G+ HT A+T G ++ WG N G++G M +P ++ + + V+S G
Sbjct: 126 AGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDMPVVKVAS---GND 182
Query: 423 HTAVVTSAGQLFTFGDGTFGVLG 445
H ++T+ G L+T G G G LG
Sbjct: 183 HLVMLTTDGDLYTLGCGEQGQLG 205
Score = 123 (48.4 bits), Expect = 0.00043, P = 0.00043
Identities = 49/182 (26%), Positives = 81/182 (44%)
Query: 308 QNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVAC--G 365
Q+ CG ++++G V+ +G +LG + P+ + + KN V G
Sbjct: 243 QDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGG 302
Query: 366 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGN---EMSLWLPKKLNG-PLEGIHVSSVSCGP 421
+HHT + G Y+ G +G LG G E S+ P ++ P+ VSSV+CG
Sbjct: 303 QHHTICMDSEGKAYSLG--RAEYGRLGLGEGAEEKSI--PTLISRLPV----VSSVACGA 354
Query: 422 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS--LKGLRTVRAACGVWHTAAV 479
V+ G++F +G GT LG G +P E+ L+ + + G HT +
Sbjct: 355 SVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
Query: 480 VE 481
V+
Sbjct: 415 VK 416
Score = 107 (42.7 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYH 591
S G T+ + + G Y++G YG+LG + +PT + +L V +ACG
Sbjct: 300 SGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS-RLP--VVSSVACGASV 356
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV--EALKDKQVKSIVCGTSFTAAICL 649
++ V+ WG G N +LG G +D P + + L+++ V ++ G T +
Sbjct: 357 GYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVK 416
Query: 650 HK 651
K
Sbjct: 417 DK 418
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 230 (86.0 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 87/301 (28%), Positives = 130/301 (43%)
Query: 320 VTKQGEVFSWGEELGGRLGHGVDSDVSHPK-LIDALKNINVELVACGEHHTCAVTLSGDM 378
V+ +F+WG G+LG G DV P+ L D K+ ++ V G H+ VT G +
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGL 70
Query: 379 YTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH-TAVVTSAGQLFTF 436
+ G + GL GH E+ + K PL G + V+CG W T ++T GQ+ +
Sbjct: 71 FVCGLNKDGQLGL-GHTEEVLRFTICK---PLLGCPIRQVACG-WDFTIMLTEKGQVLSC 125
Query: 437 GDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV-MVGXXXXXXXX 493
G FG LG HG R V P+ ++ L+ + V A G+ H A +
Sbjct: 126 GSNAFGQLGVPHGPRKCV-VPQAIECLRE-KVVCVAAGLRHALATTDTGSTFQWGTGLAS 183
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 553
G+ KE V ++ V C V+ G + +LT TG +Y G
Sbjct: 184 SGRRLC--PGQNLPLFLTAKEPSRVTGLESSTV---VCAVA-GSDHSASLTDTGELYVWG 237
Query: 554 SPVYGQLGDPKANGKLPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRL 612
+GQL LP RVE ++ V + G H+ T +V+TWG+ G+L
Sbjct: 238 RNKHGQLASLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQL 297
Query: 613 G 613
G
Sbjct: 298 G 298
Score = 173 (66.0 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 79/289 (27%), Positives = 124/289 (42%)
Query: 371 AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 430
AV+ + ++ WG ++ +G LG G++ + LP++L+ + + SV+ G H+ VVT
Sbjct: 10 AVSAAAVLFAWGANS--YGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDG 67
Query: 431 GQLFTFG---DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXX 487
G LF G DG G LGH + + T + L G + ACG W ++
Sbjct: 68 GGLFVCGLNKDGQLG-LGHTEEVLRFTICK--PLLGCPIRQVACG-WDFTIMLTEKGQVL 123
Query: 488 XXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 547
G+L +VP + L E C V+ G +A T TG
Sbjct: 124 SCGSNAFGQL----------GVPHGPRKCVVPQAIECLREKVVC-VAAGLRHALATTDTG 172
Query: 548 HVYTMGSPVY--GQLGDPKAN------GKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRT 599
+ G+ + G+ P N K P+RV G + V +A D H A LT
Sbjct: 173 STFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSD-HSASLTDTG 231
Query: 600 EVYTWGKGANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGTSFTAA 646
E+Y WG+ +G+L T P VEA +D++V ++ G + A
Sbjct: 232 ELYVWGRNKHGQLASLATF-LPLPQRVEAHYFQDEKVTAVWSGWTHLVA 279
Score = 165 (63.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 82/309 (26%), Positives = 120/309 (38%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
+F WG G LG G H+ ++ F ++++ GG H+ +VT
Sbjct: 17 LFAWG-ANSYGQLGLG-HKEDVLLPQQLSDFCKSGC-------IKSVTGGGGHSVVVTDG 67
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G +F G G+LG G +V + L + VACG T +T G + + G
Sbjct: 68 GGLFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCG- 126
Query: 384 SNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
SN FG LG HG + +P+ + E V V+ G H T G F +G G
Sbjct: 127 SNA-FGQLGVPHGPRKCV-VPQAIECLRE--KVVCVAAGLRHALATTDTGSTFQWGTGLA 182
Query: 442 GV---LGHGDRISVS-TPREVDSLKGLRTVRAACGVW---HTAAVVEVMVGXXXXXXXXX 494
L G + + T +E + GL + C V H+A++ +
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDT------------ 230
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAA--LVEPNFCQVSCGHSLTVALTTTGHVYTM 552
G+L+ W L P V A + V G + VA T TG V+T
Sbjct: 231 GELYVWGRNKHGQLASLATFLPL-PQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTW 289
Query: 553 GSPVYGQLG 561
G YGQLG
Sbjct: 290 GRADYGQLG 298
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 65/238 (27%), Positives = 94/238 (39%)
Query: 427 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREV-DSLKG--LRTVRAACGVWHTAAVVEVM 483
V++A LF +G ++G LG G + V P+++ D K +++V G H+ V +
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGG--HSVVVTD-- 66
Query: 484 VGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVAL 543
G LF E L T L+ QV+CG T+ L
Sbjct: 67 ----------GGGLFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACGWDFTIML 116
Query: 544 TTTGHVYTMGSPVYGQLGDPKANGK--LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 601
T G V + GS +GQLG P K +P +E K V +A G H T
Sbjct: 117 TEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREK--VVCVAAGLRHALATTDTGST 174
Query: 602 YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQS 659
+ WG G G +N P + A K+ S V G + +C V+G D S
Sbjct: 175 FQWGTGLASS-GRRLCPGQNLPLFLTA-KEP---SRVTGLESSTVVCA---VAGSDHS 224
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 234 (87.4 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 96/359 (26%), Positives = 157/359 (43%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVAC 364
VQ +A GG H ++ G V+++G G LG + S P +D + I ++ V+
Sbjct: 70 VQAVA-GGMHTVCLSDTGNVYTFGCNDEGALGRDTSEEGSETVPAKVDLGEKI-IQ-VSA 126
Query: 365 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLNGPLEGIHVSSVSCGPWH 423
G+ H+ A+T G +Y WG N G++G M +P K+ P++ V VS G H
Sbjct: 127 GDSHSAALTEDGGVYVWGSFRDNNGVIGLLEPMKKCTVPVKV--PIDKPVVKIVS-GNDH 183
Query: 424 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL-RTVRAACGVWHTAAVV-- 480
++T+ G+L+T G G G LG R++ KGL R + + V
Sbjct: 184 LVMLTAHGELYTSGCGEQGQLG---RVAEHFANR-GGRKGLMRLLEPQMVIIKPRGKVVF 239
Query: 481 -EVMVGXXXXXXXXX-GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQV--SCG 536
+V G G ++ + VP +++ V S G
Sbjct: 240 TDVFCGAYFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGG 299
Query: 537 HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL--PTRVEGKLTKNFVEEIACGDYHVAV 594
T+ L + G Y++G YG+LG K G+ PT V G + V+ +ACG
Sbjct: 300 QHHTLCLNSEGKAYSLGRAEYGRLGLGKDVGEKSEPTVVPGI---SDVQVVACGASVSYA 356
Query: 595 LTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV--EALKDKQVKSIVCGTSFTAAICLHK 651
+T + V++WG G N +LG G+ +D P + + L+++ V S+ G T + K
Sbjct: 357 VTKQGSVFSWGMGTNLQLGTGEEEDEWSPVEMTGKQLENRVVLSVSSGGQHTVLLVKDK 415
Score = 166 (63.5 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 45/124 (36%), Positives = 65/124 (52%)
Query: 313 GGRHAAL-VTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTC 370
GG+H L + +G+ +S G GRLG G D + S P ++ + ++ V VACG +
Sbjct: 298 GGQHHTLCLNSEGKAYSLGRAEYGRLGLGKDVGEKSEPTVVPGISDVQV--VACGASVSY 355
Query: 371 AVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGPWHTAVVT 428
AVT G +++WG G+N LG G E W P ++ G LE V SVS G HT ++
Sbjct: 356 AVTKQGSVFSWGMGTNLQ---LGTGEEEDEWSPVEMTGKQLENRVVLSVSSGGQHTVLLV 412
Query: 429 SAGQ 432
Q
Sbjct: 413 KDKQ 416
Score = 120 (47.3 bits), Expect = 0.00089, P = 0.00089
Identities = 57/190 (30%), Positives = 81/190 (42%)
Query: 431 GQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXX 489
G + G G G LG G D + P V +G+ V+A G HT + +
Sbjct: 35 GLVLVLGQGDVGQLGLGEDVMERKKPALVTLPEGI--VQAVAGGMHTVCLSDT------- 85
Query: 490 XXXXXGKLFTWXXXXXXXXXXXXKE--ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 547
G ++T+ E + VP V L E QVS G S + ALT G
Sbjct: 86 -----GNVYTFGCNDEGALGRDTSEEGSETVPAKVD-LGE-KIIQVSAGDSHSAALTEDG 138
Query: 548 HVYTMGS--PVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 603
VY GS G +G +P +P +V + K V+ I G+ H+ +LT+ E+YT
Sbjct: 139 GVYVWGSFRDNNGVIGLLEPMKKCTVPVKVP--IDKPVVK-IVSGNDHLVMLTAHGELYT 195
Query: 604 WGKGANGRLG 613
G G G+LG
Sbjct: 196 SGCGEQGQLG 205
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 235 (87.8 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 88/302 (29%), Positives = 130/302 (43%)
Query: 320 VTKQGEVFSWGEELGGRLGHGVDSDVSHPK-LIDALKNINVELVACGEHHTCAVTLSGDM 378
V+ +F+WG G+LG G DV P+ L D + ++ V G H+ VT GD+
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDL 70
Query: 379 YTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH-TAVVTSAGQLFTF 436
+ G + GL GH E+ + K PL G + V+CG W T ++T GQ+ +
Sbjct: 71 FVCGLNKDGQLGL-GHTEEVLRFTICK---PLRGCPIRQVACG-WDFTIMLTEKGQVLSC 125
Query: 437 GDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV-MVGXXXXXXXX 493
G FG LG HG R V P+ ++ L+ + V A G+ H A V
Sbjct: 126 GSNAFGQLGVPHGPRKCV-VPQAIECLRE-KVVCVAAGLRHALATTATGSVFQWGTGLAS 183
Query: 494 XGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPN-FCQVSCGHSLTVALTTTGHVYTM 552
G+ KE P+ V L C V+ G + +LT TG +Y
Sbjct: 184 SGRRLC--PGQNLPLFLTAKE----PSRVTGLENSTAVCAVA-GSDHSASLTDTGELYVW 236
Query: 553 GSPVYGQLGDPKANGKLPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGR 611
G +GQL LP R+E ++ V + G H+ T +V+TWG+ G+
Sbjct: 237 GRNKHGQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQ 296
Query: 612 LG 613
LG
Sbjct: 297 LG 298
Score = 231 (86.4 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 101/386 (26%), Positives = 159/386 (41%)
Query: 288 GVKMDSFVPKAVESAVVLD-VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 346
G K D F+P+ + ++++ GG H+A+VT G++F G G+LG G +V
Sbjct: 31 GHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVL 90
Query: 347 HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG--HGNEMSLWLPKK 404
+ L+ + VACG T +T G + + G SN FG LG HG + +P+
Sbjct: 91 RFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCG-SNA-FGQLGVPHGPRKCV-VPQA 147
Query: 405 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL 464
+ E V V+ G H T+ G +F +G G + G R+ + +
Sbjct: 148 IECLRE--KVVCVAAGLRHALATTATGSVFQWGTG---LASSGRRLCPG--QNLPLFLTA 200
Query: 465 RTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAA 524
+ G+ ++ AV V G+L+ W L P + A
Sbjct: 201 KEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLASRAVFLPL-PQRIEA 259
Query: 525 --LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEGKLT- 578
+ V G + VA T TG V+T G YGQLG +P K P + L
Sbjct: 260 HYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQK-PVEQDSSLAF 318
Query: 579 ---KNFVE----------EIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 624
+N V EI+CG H +AV+ R + +WG +G G G + P+
Sbjct: 319 QGPQNSVPSPLHCLTGATEISCGSEHNLAVI--RDKCCSWGWNEHGMCGDGTESNVWTPT 376
Query: 625 LVEALKDKQVKSIV--CGTSFTAAIC 648
V+AL + ++ CG + A+C
Sbjct: 377 PVQALPPSPSRLLLVGCGAGHSLAVC 402
Score = 183 (69.5 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 80/294 (27%), Positives = 128/294 (43%)
Query: 369 TCA---VTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 425
+CA V+ + ++ WG ++ +G LG G++ ++LP++L+ + + SV+ G H+A
Sbjct: 5 SCASETVSAAAVLFAWGANS--YGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSA 62
Query: 426 VVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 482
VVT G LF G DG G LGH + + T + L+G + ACG W ++
Sbjct: 63 VVTDGGDLFVCGLNKDGQLG-LGHTEEVLRFTICK--PLRGCPIRQVACG-WDFTIMLTE 118
Query: 483 MVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVA 542
G+L +VP + L E C V+ G +A
Sbjct: 119 KGQVLSCGSNAFGQL----------GVPHGPRKCVVPQAIECLREKVVC-VAAGLRHALA 167
Query: 543 LTTTGHVYTMGSPVY--GQLGDPKAN------GKLPTRVEGKLTKNFVEEIACGDYHVAV 594
T TG V+ G+ + G+ P N K P+RV G V +A D H A
Sbjct: 168 TTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSD-HSAS 226
Query: 595 LTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGTSFTAA 646
LT E+Y WG+ +G+L P +EA +D++V ++ G + A
Sbjct: 227 LTDTGELYVWGRNKHGQLASRAVF-LPLPQRIEAHYFQDEKVTAVWSGWTHLVA 279
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 65/235 (27%), Positives = 93/235 (39%)
Query: 427 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGX 486
V++A LF +G ++G LG G + V P+++ +++ G +AVV
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVV------ 64
Query: 487 XXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
G LF E L T L QV+CG T+ LT
Sbjct: 65 -----TDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEK 119
Query: 547 GHVYTMGSPVYGQLGDPKANGK--LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTW 604
G V + GS +GQLG P K +P +E K V +A G H T+ V+ W
Sbjct: 120 GQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREK--VVCVAAGLRHALATTATGSVFQW 177
Query: 605 GKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQS 659
G G G +N P + A K+ S V G + A+C V+G D S
Sbjct: 178 GTGLASS-GRRLCPGQNLPLFLTA-KEP---SRVTGLENSTAVCA---VAGSDHS 224
Score = 127 (49.8 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 51/189 (26%), Positives = 80/189 (42%)
Query: 313 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA--LKNINVELVACGEHHTC 370
G H+A +T GE++ WG G+L + P+ I+A ++ V V G H
Sbjct: 220 GSDHSASLTDTGELYVWGRNKHGQLASRAVF-LPLPQRIEAHYFQDEKVTAVWSGWTHLV 278
Query: 371 AVTLSGDMYTWGGSNCNFGLLGHGNEM-SLWLPKK------LNGPLEGI----H----VS 415
A T +G ++TWG ++G LG E P + GP + H +
Sbjct: 279 AKTETGKVFTWG--RADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGAT 336
Query: 416 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL--KGLRTVRAACGV 473
+SCG H V + ++G G+ G G +V TP V +L R + CG
Sbjct: 337 EISCGSEHNLAVIR-DKCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGA 395
Query: 474 WHTAAVVEV 482
H+ AV ++
Sbjct: 396 GHSLAVCQL 404
Score = 41 (19.5 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 69 RIIPGQRTPIFQRYPRPEK 87
R+ PGQ P+F P +
Sbjct: 187 RLCPGQNLPLFLTAKEPSR 205
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 185 (70.2 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 56/198 (28%), Positives = 97/198 (48%)
Query: 293 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 352
S P+ + V A G +H L+T+ GEV+S+G L R + S P L +
Sbjct: 29 SVTPERLPGWTGKTVLQAALGVKHGVLLTEDGEVYSFGT-LPWR-SEPAELCPSSPILEN 86
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN------ 406
AL V VA G H+ AVT SG +Y WG ++ G N+ + P ++
Sbjct: 87 ALVGQYVVTVATGSFHSGAVTESGVVYMWGENSA--GQCAVANQQYVPEPNPVSISDSET 144
Query: 407 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT-FGVLGHGDRISVSTPREVDSLKGLR 465
PL + + ++CG HT ++ + +++ +G G G++ V+ P++V+ L G
Sbjct: 145 SPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLIT--TTFPVTKPQKVEHLAGRV 202
Query: 466 TVRAACGVWHTAAVVEVM 483
++ ACG +H+ A+V+ +
Sbjct: 203 VLQVACGAFHSLALVQCL 220
Score = 133 (51.9 bits), Expect = 0.00021, P = 0.00021
Identities = 48/157 (30%), Positives = 73/157 (46%)
Query: 331 EELGG--RLG-HGVDSDVSHPKLIDALKNINVELVAC-----GEHHTCAVTLSGDMYTWG 382
E GG RL G+ S VS P+L+ + V GE +L +++TWG
Sbjct: 468 ESEGGTRRLSLPGLLSQVS-PRLLRRAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWG 526
Query: 383 -GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G + G LGHG+ + P + L+G V + G +H+ +T+ Q++++G TF
Sbjct: 527 KGKD---GQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTF 582
Query: 442 GVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 478
G LGH D + PR L + + GVW AA
Sbjct: 583 GQLGHSD-FPTTVPR-------LAKMNSENGVWSVAA 611
Score = 115 (45.5 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 593 AVLTS-RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG----TSFTAAI 647
A+L S RTEV+TWGKG +G+LGHGD R P V+ L K+V + G + TA
Sbjct: 513 ALLPSLRTEVWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKS 572
Query: 648 CLHKWVS 654
++ W S
Sbjct: 573 QVYSWGS 579
Score = 114 (45.2 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 29/96 (30%), Positives = 43/96 (44%)
Query: 549 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 608
V+T G GQLG +L L V + G YH LT++++VY+WG
Sbjct: 522 VWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNT 581
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 644
G+LGH D P L + + V S+ G ++
Sbjct: 582 FGQLGHSDFPT-TVPRLAKMNSENGVWSVAAGQDYS 616
Score = 98 (39.6 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 36/129 (27%), Positives = 55/129 (42%)
Query: 496 KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
+++TW RL P CV L + G ++ALT VY+ GS
Sbjct: 521 EVWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 580
Query: 556 VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG-DYHVAVLTSRTEVYTWGKGANGRLGH 614
+GQLG +P R+ ++N V +A G DY + ++ TE + G +GR
Sbjct: 581 TFGQLGHSDFPTTVP-RLAKMNSENGVWSVAAGQDYSLFLVD--TEDFQPGLYYSGR--Q 635
Query: 615 GDTDDRNFP 623
T+ N P
Sbjct: 636 DPTEGDNLP 644
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 231 (86.4 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 87/361 (24%), Positives = 153/361 (42%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV--A 363
D+ GG H ++K G+V+S+G G LG D+ V +++ + ++V +
Sbjct: 68 DIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR--DTSVEGSEMVPGKVELQEKVVQVS 125
Query: 364 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE---GIHVSSVSCG 420
G+ HT A+T G ++ WG N G++G M KK P++ + V V+ G
Sbjct: 126 AGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPM-----KKSMVPVQVQLSMPVVKVASG 180
Query: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP-RE-VDSLKGLRTVRAAC-GVWHTA 477
H ++T+ G+L+T G G G LG + + R+ ++ L + V G
Sbjct: 181 NDHLVMLTADGELYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHV 240
Query: 478 AVVEVMVGXXXXXXXXX-GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEP--NFCQVS 534
+ G G ++ + E+ VP + + ++ + S
Sbjct: 241 RFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVRFS 300
Query: 535 CGHSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHV 592
G TV + + G Y++G YG+LG + +PT + +L V +ACG
Sbjct: 301 GGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLIS-RLPA--VSSVACGASVG 357
Query: 593 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV--EALKDKQVKSIVCGTSFTAAICLH 650
+T V+ WG G N +LG G +D P + + L+++ V S+ G T +
Sbjct: 358 YAVTKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRMVLSVSSGGQHTVLLVKD 417
Query: 651 K 651
K
Sbjct: 418 K 418
Score = 231 (86.4 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 101/368 (27%), Positives = 159/368 (43%)
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTL 374
H + T+ G V + G+ G+LG G + + P L+ ++I V+ A G H C ++
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVPIPEDI-VQAEAGGMHTVC-LSK 84
Query: 375 SGDMYTWGGSNCNF-GLLGHGN--EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
SG +Y++G CN G LG E S +P K+ L+ V VS G HTA +T G
Sbjct: 85 SGQVYSFG---CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAALTEDG 138
Query: 432 QLFTFGD--GTFGVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
++F +G GV+G + + S P +V + V+ A G H ++
Sbjct: 139 RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--SMPVVKVASGNDHLV-MLTADGELYT 195
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCV-----AALVEPNFCQVSCGHSLTVAL 543
G+L E LVP CV + F CG T A+
Sbjct: 196 LGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAI 255
Query: 544 TTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEG--KLTKNFVEEIACGDYHVAVLTSRTE 600
++ GHVY G Y QLG P +P + TK++V + G +H + S
Sbjct: 256 SSEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVR-FSGGQHHTVCMDSEGR 314
Query: 601 VYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG 655
Y+ G+ GRLG G+ ++++ P+L+ L V S+ CG S A+ + W G
Sbjct: 315 AYSLGRAEYGRLGLGEGAEEKSVPTLISRLP--AVSSVACGASVGYAVTKDGRVFAWGMG 372
Query: 656 VDQSMCSG 663
+ + +G
Sbjct: 373 TNYQLGTG 380
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 61/230 (26%), Positives = 100/230 (43%)
Query: 264 VFIWGECT-GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
VF+WG +G++G +K S VP V+ + + V +A G H ++T
Sbjct: 140 VFLWGSFRDNNGVIG-------LLEPMKK-SMVPVQVQLS--MPVVKVASGNDHLVMLTA 189
Query: 323 QGEVFSWGEELGGRLGH--------GVDSDVSH---PKLIDALKN------INVELVACG 365
GE+++ G G+LG G + PK + LK+ + + CG
Sbjct: 190 DGELYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCV-MLKSRGSRGHVRFQDAFCG 248
Query: 366 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGPWH 423
+ T A++ G +Y +G SN + LG S ++P+ L + S V S G H
Sbjct: 249 AYFTFAISSEGHVYGFGLSN--YHQLGTPGTESCFVPQNLTS-FKNSTKSWVRFSGGQHH 305
Query: 424 TAVVTSAGQLFTFGDGTFGVLGHGDRISV-STPREVDSLKGLRTVRAACG 472
T + S G+ ++ G +G LG G+ S P + L + +V ACG
Sbjct: 306 TVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRLPAVSSV--ACG 353
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 232 (86.7 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 109/411 (26%), Positives = 167/411 (40%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
+F WG G LG G H+ + ++ F ++ I GG H+A+VT +
Sbjct: 17 LFAWG-ANSYGQLGLG-HKEDVLSAQQLSDFCKSGC-------IKRITGGGGHSAVVTDE 67
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G +F G G+LG G +V + +L ++ VACG T +T +G + + G
Sbjct: 68 GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCG- 126
Query: 384 SNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
SN +FG LG HG + +P+ + E V S++ G H T++G +F +G G
Sbjct: 127 SN-SFGQLGVPHGPRRCV-IPQAIELLRE--KVVSIAAGLRHALAATASGTVFQWGTGLA 182
Query: 442 GV---LGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXX-XGK 496
L G + + T +E ++ GL +A C V+ G G+
Sbjct: 183 SSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVC----------VLAGSDHSASLTDAGE 232
Query: 497 LFTWXXXXXXXXXXXXKEARLVPTCVAALVEPN--FCQVSCGHSLTVALTTTGHVYTMGS 554
L+ W L+P + A N V G + VA T TG V+T G
Sbjct: 233 LYVWGSNKHGQLASQAAFL-LLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGR 291
Query: 555 PVYGQLG----------DPKANGKLPTRVEGKLTKNFVE------EIACGDYH-VAVLTS 597
YGQLG K + LP K T + + EI+CG H +AV+
Sbjct: 292 ADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLAVIGG 351
Query: 598 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 648
++WG +G G G D P V L+ + CG + A+C
Sbjct: 352 --VCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCGAGHSLALC 400
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 70/256 (27%), Positives = 106/256 (41%)
Query: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV-DSLKGLRTVRAACGVWHTAAV 479
P + V +A LF +G ++G LG G + V + +++ D K R G H+A V
Sbjct: 5 PHSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVV 64
Query: 480 VEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSL 539
+ G LF E L T +L+ QV+CG
Sbjct: 65 TD------------EGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDF 112
Query: 540 TVALTTTGHVYTMGSPVYGQLGDPKANGK--LPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
T+ LT G V + GS +GQLG P + +P +E L + V IA G H T+
Sbjct: 113 TIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIE--LLREKVVSIAAGLRHALAATA 170
Query: 598 RTEVYTWGKG--ANGR-LGHGDTDD----RNFPSLVEALKDKQVKSIVCGTSFTAAIC-- 648
V+ WG G ++GR L G T PS V L++ Q ++ G+ +A++
Sbjct: 171 SGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDA 230
Query: 649 --LHKWVSGVDQSMCS 662
L+ W S + S
Sbjct: 231 GELYVWGSNKHGQLAS 246
Score = 154 (59.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 50/190 (26%), Positives = 83/190 (43%)
Query: 310 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA--LKNINVELVACGEH 367
+ G H+A +T GE++ WG G+L + + P+ I+A +N + V G
Sbjct: 217 VLAGSDHSASLTDAGELYVWGSNKHGQLASQA-AFLLLPQRIEARCFQNEKIAAVWSGWT 275
Query: 368 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLN------GPLEGIH------- 413
H A T++G ++TWG ++G LG E W +K + GP +G
Sbjct: 276 HLVAQTVTGKVFTWG--RADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLT 333
Query: 414 -VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
+ +SCG H V G ++G G+ G G V P+ V L+ + CG
Sbjct: 334 GATEISCGSEHNLAVIG-GVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCG 392
Query: 473 VWHTAAVVEV 482
H+ A+ ++
Sbjct: 393 AGHSLALCQL 402
Score = 150 (57.9 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 65/258 (25%), Positives = 107/258 (41%)
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 426
H + AV + ++ WG ++ +G LG G++ + ++L+ + + ++ G H+AV
Sbjct: 6 HSSEAVPTAAALFAWGANS--YGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAV 63
Query: 427 VTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 483
VT G LF G DG G LGH + + TP + SL G + ACG W ++
Sbjct: 64 VTDEGSLFVCGLNKDGQLG-LGHTEEVLYFTPCK--SLLGCAIQQVACG-WDFTIIL--- 116
Query: 484 VGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEAR-LVPTCVAALVEPNFCQVSCGHSLTVA 542
G++ + R ++P + L E ++ G +A
Sbjct: 117 --------TENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLRE-KVVSIAAGLRHALA 167
Query: 543 LTTTGHVYTMGSPVY--------GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAV 594
T +G V+ G+ + GQ K P+ V G V +A D H A
Sbjct: 168 ATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSD-HSAS 226
Query: 595 LTSRTEVYTWGKGANGRL 612
LT E+Y WG +G+L
Sbjct: 227 LTDAGELYVWGSNKHGQL 244
Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 69 RIIPGQRTPIFQRYPRPE-----KEYQSFSLIY-NDRSLDLICKDKDEAEVW 114
R+ PGQ P+F P + Q+ ++ +D S L D E VW
Sbjct: 187 RLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLT--DAGELYVW 236
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 230 (86.0 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 100/370 (27%), Positives = 159/370 (42%)
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTL 374
H + T+ G V + G+ G+LG G + P L+ L+++ V+ A G H C ++
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV-VQAEAGGMHTVC-LSQ 84
Query: 375 SGDMYTWGGSNCNF-GLLGHGN--EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
SG +Y++G CN G LG E S +P K+ L+ V VS G HTA +T G
Sbjct: 85 SGQVYSFG---CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAALTEDG 138
Query: 432 QLFTFG-----DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGX 486
++F +G +G G+L + V ++D+ + V+ A G H ++
Sbjct: 139 RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDT----QVVKVASGNDHLV-MLTTDGDL 193
Query: 487 XXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCV-----AALVEPNFCQVSCGHSLTV 541
G+L E LVP CV F CG T
Sbjct: 194 YTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTF 253
Query: 542 ALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEG--KLTKNFVEEIACGDYHVAVLTSR 598
A++ GHVY G Y QLG P +P + TK++V + G +H + S
Sbjct: 254 AISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVG-FSGGQHHTVCMDSE 312
Query: 599 TEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWV 653
+ Y+ G+ GRLG G+ ++++ P+L+ L V S+ CG S A+ + W
Sbjct: 313 GKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAVSKDGRVFAWG 370
Query: 654 SGVDQSMCSG 663
G + + +G
Sbjct: 371 MGTNYQLGTG 380
Score = 214 (80.4 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 83/360 (23%), Positives = 147/360 (40%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV--A 363
DV GG H +++ G+V+S+G G LG D+ V +++ + ++V +
Sbjct: 68 DVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGR--DTSVEGSEMVPGKVELQEKVVQVS 125
Query: 364 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPW 422
G+ HT A+T G ++ WG N G++G M +P ++ + + V+S G
Sbjct: 126 AGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQVVKVAS---GND 182
Query: 423 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC----GVWHTAA 478
H ++T+ G L+T G G G LG + + L+ L R G
Sbjct: 183 HLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGR-QGLERLLVPRCVLLKSRGTRGRVR 241
Query: 479 VVEVMVGXXXXXXXXX-GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQV--SC 535
+ G G ++ + + +P + + V S
Sbjct: 242 FQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSG 301
Query: 536 GHSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVA 593
G TV + + G Y++G YG+LG + +PT + +L V +ACG
Sbjct: 302 GQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS-RLP--VVSSVACGASVGY 358
Query: 594 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV--EALKDKQVKSIVCGTSFTAAICLHK 651
++ V+ WG G N +LG G DD P + + L++++V ++ G T + K
Sbjct: 359 AVSKDGRVFAWGMGTNYQLGTGQEDDAWSPVEMTGKQLENREVLTVSSGGQHTVLLVKDK 418
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 226 (84.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 97/348 (27%), Positives = 152/348 (43%)
Query: 311 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHT 369
+C H + T+ G V + G+ G+LG G + + P L+ +++ V+ A G H
Sbjct: 39 SCQVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQAEAGGMHTV 97
Query: 370 CAVTLSGDMYTWGGSNCNF-GLLGHGN--EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 426
C ++ SG +Y++G CN G LG E S +P K+ L+ V VS G HTA
Sbjct: 98 C-LSKSGQVYSFG---CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAA 150
Query: 427 VTSAGQLFTFGD--GTFGVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVM 483
+T G++F +G GV+G + + S P +V + V+ A G H ++
Sbjct: 151 LTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLV-MLTAD 207
Query: 484 VGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCV-----AALVEPNFCQVSCGHS 538
G+L E LVP CV + F CG
Sbjct: 208 GDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAY 267
Query: 539 LTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEG--KLTKNFVEEIACGDYHVAVL 595
T A++ GHVY G Y QLG P +P + TK++V + G +H +
Sbjct: 268 FTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVG-FSGGQHHTVCM 326
Query: 596 TSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTS 642
S + Y+ G+ GRLG G+ ++++ P+L+ L V S+ CG S
Sbjct: 327 DSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--AVSSVACGAS 372
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 43/143 (30%), Positives = 72/143 (50%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV--A 363
DV GG H ++K G+V+S+G G LG D+ V +++ + ++V +
Sbjct: 85 DVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR--DTSVEGSEMVPGKVELQEKVVQVS 142
Query: 364 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPW 422
G+ HT A+T G ++ WG N G++G M +P ++ L+ + V V+ G
Sbjct: 143 AGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ--LD-VPVVKVASGND 199
Query: 423 HTAVVTSAGQLFTFGDGTFGVLG 445
H ++T+ G L+T G G G LG
Sbjct: 200 HLVMLTADGDLYTLGCGEQGQLG 222
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 209 (78.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 50/120 (41%), Positives = 71/120 (59%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG-DPK--ANGKLPTRVEGKLTKNFVEEIACG 588
Q+S G + + ALT G +YT G P G+LG PK N K+P V G K V ++ACG
Sbjct: 41 QLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEK--VIQVACG 98
Query: 589 DYHVAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
H VLT + VYT+G G G+LG G T + + P ++E++KDK++ + CG + TA I
Sbjct: 99 GGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 157
Score = 162 (62.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 49/160 (30%), Positives = 82/160 (51%)
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN-VELVACGEHHTCAVTLSGDMYTWG 382
G+V++ G G+LG G + S LI + + ++ ++ G + + A+T G++YT+G
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFG 62
Query: 383 GSNCNFGLLGHGNEMSL--WLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 440
G LG ++ + +P+ + G E V V+CG HT V+T ++TFG G
Sbjct: 63 EPES--GKLGLPPKLLVNHKVPQLVPGISE--KVIQVACGGGHTVVLTEKA-VYTFGLGQ 117
Query: 441 FGVLGHGD-RISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
FG LG G S P+ ++S+K + CG HTA +
Sbjct: 118 FGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 157
Score = 139 (54.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 39/125 (31%), Positives = 66/125 (52%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVELVAC 364
++ ++ G +A +T +GE++++GE G+LG V+H P+L+ + ++ VAC
Sbjct: 39 IKQLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQ-VAC 97
Query: 365 GEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWH 423
G HT +T +YT+G FG LG G PK + ++ +S V CG H
Sbjct: 98 GGGHTVVLTEKA-VYTFGLGQ--FGQLGLGTFTFETSEPKVIES-VKDKKISHVCCGENH 153
Query: 424 TAVVT 428
TA++T
Sbjct: 154 TALIT 158
Score = 126 (49.4 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 295 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDA 353
VP+ V +Q +ACGG H ++T++ V+++G G+LG G + + S PK+I++
Sbjct: 81 VPQLVPGISEKVIQ-VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIES 138
Query: 354 LKNINVELVACGEHHTCAVT 373
+K+ + V CGE+HT +T
Sbjct: 139 VKDKKISHVCCGENHTALIT 158
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 174 (66.3 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 56/199 (28%), Positives = 92/199 (46%)
Query: 269 ECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFS 328
+ T +L G ++ G +++ + + + + I+CG H ++ Q V+S
Sbjct: 333 QTTPTKVLSFGGSNDNNFLGGVINNELQMMTDQMNSIKIIQISCGSNHILALSDQYHVYS 392
Query: 329 WGEELGGRLGHGVD-SDVSH-------PKLIDAL--KNINVELVACGEHHTCAVTLSGDM 378
WG G+LGHG D S VS PK I +L K + V V+ G H A+TL +
Sbjct: 393 WGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSGI 452
Query: 379 YTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLE-GIHVSSVSCGPWHTAVVT-SAGQLFT 435
TWG GS+ G LG G +W P ++ ++ + + CG +++ +T +L+
Sbjct: 453 LTWGKGSD---GQLGTGFRHDIWSPFEIKRVIDKNEKIVQICCGYFNSFFITLEKRELYQ 509
Query: 436 FGDGTFGVLGHGDRISVST 454
FG LG D I + T
Sbjct: 510 FGWSI--PLGKSDDILIPT 526
Score = 164 (62.8 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 48/168 (28%), Positives = 84/168 (50%)
Query: 321 TKQGEVFSWGEELGGR-LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMY 379
T +V S+G LG +++++ + D + +I + ++CG +H A++ +Y
Sbjct: 334 TTPTKVLSFGGSNDNNFLGGVINNELQ--MMTDQMNSIKIIQISCGSNHILALSDQYHVY 391
Query: 380 TWGGSNCNFGLLGHGNEMSL------WL--PKKLNGPLE-GIHVSSVSCGPWHTAVVTSA 430
+WG + G LGHG + S W+ PKK+ E G+ V SVS G H +T
Sbjct: 392 SWGSAE--HGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLD 449
Query: 431 GQLFTFGDGTFGVLGHGDRISVSTPREVDSL--KGLRTVRAACGVWHT 476
+ T+G G+ G LG G R + +P E+ + K + V+ CG +++
Sbjct: 450 SGILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQICCGYFNS 497
Score = 156 (60.0 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 42/133 (31%), Positives = 64/133 (48%)
Query: 325 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 384
++F WG G G D + P + L N+ ++CG HT ++ SGD+Y+WG S
Sbjct: 11 QIFYWGR--GVNQG---DKHIIEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSS 65
Query: 385 NCNFGLLGHGNEMSLW-LPKKLNG-----PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGD 438
N + G LGHG+ + + PK + L G V VS G T V+T G ++ +G
Sbjct: 66 NSS-GQLGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGS 124
Query: 439 GTFGVLGHGDRIS 451
G L G ++
Sbjct: 125 NIEGQLALGQPVN 137
Score = 136 (52.9 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 43/132 (32%), Positives = 65/132 (49%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEG-KLTKNFVEE--- 584
Q+SCG + +AL+ HVY+ GS +G+LG D + P + K K+ E+
Sbjct: 373 QISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVT 432
Query: 585 ---IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVK--SIVC 639
++ G H LT + + TWGKG++G+LG G D P ++ + DK K I C
Sbjct: 433 VISVSSGYSHCMALTLDSGILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQICC 492
Query: 640 GTSFTAAICLHK 651
G + I L K
Sbjct: 493 GYFNSFFITLEK 504
Score = 118 (46.6 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 34/102 (33%), Positives = 52/102 (50%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEE-LGGRLGHGVDSDVSH--PK------LIDALKN 356
++ ++CG H +++ G+++SWG G+LGHG DS + PK LI AL
Sbjct: 39 NIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHG-DSKNQYGKPKNIKKFSLIKALSG 97
Query: 357 INVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS 398
+V V+ G T +T G +Y WG SN G L G ++
Sbjct: 98 DSVIQVSTGLDFTFVLTDQGSIYNWG-SNIE-GQLALGQPVN 137
Score = 114 (45.2 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 30/96 (31%), Positives = 49/96 (51%)
Query: 584 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDT------DDR--NFPSLVEALKDKQVK 635
+I+CG H+ L+ + VY+WG +G+LGHG+ + R N P +++L++K V
Sbjct: 373 QISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVT 432
Query: 636 --SIVCGTSFTAAICLHK----WVSGVDQSMCSGCR 665
S+ G S A+ L W G D + +G R
Sbjct: 433 VISVSSGYSHCMALTLDSGILTWGKGSDGQLGTGFR 468
Score = 96 (38.9 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 39/151 (25%), Positives = 56/151 (37%)
Query: 432 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXX 491
Q+F +G G + GD+ + P EV L V+ +CG HT + +
Sbjct: 11 QIFYWGRG----VNQGDK-HIIEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSS 65
Query: 492 XXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYT 551
G+L K+ L+ AL + QVS G T LT G +Y
Sbjct: 66 NSSGQLGHGDSKNQYGKPKNIKKFSLIK----ALSGDSVIQVSTGLDFTFVLTDQGSIYN 121
Query: 552 MGSPVYGQL--GDPKANGKLPTRVEGKLTKN 580
GS + GQL G P + + T N
Sbjct: 122 WGSNIEGQLALGQPVNKNEKENNINNNTTNN 152
Score = 92 (37.4 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL--------PTRVEGKLTKNFVE 583
Q+S G+S T+ L G ++G +GQLG P + + PT + L FVE
Sbjct: 568 QISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPA-LLPYFVE 626
Query: 584 EIACGDYH-VAVLTSR 598
+ CG +H VA++++R
Sbjct: 627 SVQCGRWHSVAIVSNR 642
Score = 89 (36.4 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG----HG--DRIS-VSTPREVDSLKGLRT 466
+ +S G HT ++ G+ + G G FG LG H D+ S V+ P + +L
Sbjct: 566 IKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYFV 625
Query: 467 VRAACGVWHTAAVV 480
CG WH+ A+V
Sbjct: 626 ESVQCGRWHSVAIV 639
Score = 86 (35.3 bits), Expect = 8.3e-15, Sum P(3) = 8.3e-15
Identities = 25/81 (30%), Positives = 40/81 (49%)
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG----HGDTD-DR--NFPSLV 626
E N +++I+ G H +L E + G+G G+LG H D D N+P+++
Sbjct: 558 ENNDNSNRIKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVI 617
Query: 627 EALKDKQVKSIVCGTSFTAAI 647
AL V+S+ CG + AI
Sbjct: 618 PALLPYFVESVQCGRWHSVAI 638
Score = 82 (33.9 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 264 VFIWGECTGDGILGGGIHRS--GSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 321
++ WG G LG G ++ G +K S + KA+ V+ V G ++T
Sbjct: 59 LYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFSLI-KALSGDSVIQVST---GLDFTFVLT 114
Query: 322 KQGEVFSWGEELGGRLGHG 340
QG +++WG + G+L G
Sbjct: 115 DQGSIYNWGSNIEGQLALG 133
Score = 72 (30.4 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDP-KANGKLPTRVEGKLTKNF-VEEIACGDY 590
VS G+S +ALT + T G GQLG + + P ++ + KN + +I CG +
Sbjct: 436 VSSGYSHCMALTLDSGILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQICCGYF 495
Query: 591 HVAVLT-SRTEVYTWG 605
+ +T + E+Y +G
Sbjct: 496 NSFFITLEKRELYQFG 511
Score = 42 (19.8 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 11/55 (20%), Positives = 21/55 (38%)
Query: 769 ESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGS 823
+ ++ N N RG L +S +N+ + N ++ S+S S
Sbjct: 268 DENNNNNNNNNNNNNKRGATL-GSLSSSTTTSNNSTPNTTANNSPNLLSSSSSSS 321
Score = 41 (19.5 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 519 PTCVAALVEPNFCQ-VSCGHSLTVALTT 545
PT + AL+ P F + V CG +VA+ +
Sbjct: 614 PTVIPALL-PYFVESVQCGRWHSVAIVS 640
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 223 (83.6 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 87/298 (29%), Positives = 134/298 (44%)
Query: 326 VFSWGEELGGRLGHGVDSDVSHPK-LIDALKNINVELVACGEHHTCAVTLSGDMYTWG-G 383
+F+WG G+LG G DV P+ L + K V+ + G H+ VT G ++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGLN 76
Query: 384 SNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH-TAVVTSAGQLFTFGDGTFG 442
+ GL GH ++ L+ L L G + V+CG W T ++T GQ+ + G +FG
Sbjct: 77 KDGQLGL-GHTEDV-LYFT--LCKSLLGCPIQQVACG-WDFTIILTKNGQVLSCGSNSFG 131
Query: 443 VLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHT-AAVVEVMVGXXXXXXXXXGKLFT 499
LG HG R V P+ ++ ++ + V A G+ H AA +V G+
Sbjct: 132 QLGVPHGPRRCV-VPQAIE-VQREKVVSIAAGLRHALAATASGLVFQWGTGLASSGRRLC 189
Query: 500 WXXXXXXXXXXXXKEARLVPTCVAALVEPN--FCQVS-CGHSLTVALTTTGHVYTMGSPV 556
KE P+ V +E + C ++ GHS +LT G +Y GS
Sbjct: 190 --PGQTLPLFLTAKE----PSKVTVGLENSQAVCVLAGSGHS--ASLTDAGELYVWGSNK 241
Query: 557 YGQLGDPKANGKLPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 613
+GQL A LP ++E +N V + G H+ T +V+TWG+ G+LG
Sbjct: 242 HGQLASQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLG 299
Score = 205 (77.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 79/279 (28%), Positives = 119/279 (42%)
Query: 288 GVKMDSFVPKAV-ESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 346
G K D +P+ + E V+ I GG H+A+VT QG +F G G+LG G DV
Sbjct: 31 GHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGLNKDGQLGLGHTEDVL 90
Query: 347 HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG--HGNEMSLWLPKK 404
+ L +L ++ VACG T +T +G + + G SN +FG LG HG + +P+
Sbjct: 91 YFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCG-SN-SFGQLGVPHGPRRCV-VPQA 147
Query: 405 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL 464
+ E V S++ G H T++G +F +G G + G R+ + L
Sbjct: 148 IEVQRE--KVVSIAAGLRHALAATASGLVFQWGTG---LASSGRRLCPGQTLPL-FLTAK 201
Query: 465 RTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAA 524
+ G+ ++ AV + G+L+ W L P + A
Sbjct: 202 EPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLASQAAFLPL-PQKIEA 260
Query: 525 --LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
V G + VA T TG V+T G YGQLG
Sbjct: 261 HRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLG 299
Score = 146 (56.5 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 72/266 (27%), Positives = 107/266 (40%)
Query: 430 AGQLFTFGDGTFGVLGHGDRISVSTPREVDSL-KGLRTVRAACGVWHTAAVVEVMVGXXX 488
A LF +G ++G LG G + V P+++ K R G H+A V +
Sbjct: 14 ATALFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTD------- 66
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 548
G LF E L T +L+ QV+CG T+ LT G
Sbjct: 67 -----QGSLFVCGLNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQ 121
Query: 549 VYTMGSPVYGQLGDPKANGK--LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGK 606
V + GS +GQLG P + +P +E + K V IA G H T+ V+ WG
Sbjct: 122 VLSCGSNSFGQLGVPHGPRRCVVPQAIEVQREK--VVSIAAGLRHALAATASGLVFQWGT 179
Query: 607 G--ANGR-LGHGDTDD----RNFPSLVEA-LKDKQVKSIVCGTSFTAAIC----LHKWVS 654
G ++GR L G T PS V L++ Q ++ G+ +A++ L+ W S
Sbjct: 180 GLASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGS 239
Query: 655 GVDQSMCSGCR-IPFNFKRKRHNCYN 679
+ S +P K + H N
Sbjct: 240 NKHGQLASQAAFLPLPQKIEAHRFQN 265
Score = 137 (53.3 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 67/283 (23%), Positives = 116/283 (40%)
Query: 378 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 437
++ WG ++ +G LG G++ + LP++L+ + V ++ G H+A+VT G LF G
Sbjct: 17 LFAWGANS--YGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCG 74
Query: 438 ---DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXX 494
DG G LGH + + T + SL G + ACG W ++
Sbjct: 75 LNKDGQLG-LGHTEDVLYFTLCK--SLLGCPIQQVACG-WDFTIIL-----------TKN 119
Query: 495 GKLFTWXXXXXXXXXXXXKEAR-LVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMG 553
G++ + R +VP + E ++ G +A T +G V+ G
Sbjct: 120 GQVLSCGSNSFGQLGVPHGPRRCVVPQAIEVQRE-KVVSIAAGLRHALAATASGLVFQWG 178
Query: 554 SPVY--------GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 605
+ + GQ K P++V L + + G H A LT E+Y WG
Sbjct: 179 TGLASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWG 238
Query: 606 KGANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGTSFTAA 646
+G+L P +EA ++++V ++ G + A
Sbjct: 239 SNKHGQLA-SQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVA 280
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 158 (60.7 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 58/201 (28%), Positives = 94/201 (46%)
Query: 290 KMDSFVPKAVESAVV-LD-VQ--NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 345
K+ ++ K+ E V +D VQ + ACG H + + V+SWG GRLGH D
Sbjct: 278 KVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDE 337
Query: 346 SHPKLIDAL--KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPK 403
P+L+ + V CG + V G ++ +G N G E +++ PK
Sbjct: 338 MVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLLFLFG-QNKKTG------EANMY-PK 389
Query: 404 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQ-LFTFGDG-TFGVLGHGDRISVST-PREVDS 460
+ L G +++ + C +T+++ SA L +G TFG LG G+ ST P+EV
Sbjct: 390 PVQD-LSGWNITDIGCA--NTSIMISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPK 446
Query: 461 LKGLRTVRAACGVWHTAAVVE 481
L ++ + G HT +V+
Sbjct: 447 LDNIKIPQVTMGYSHTVLLVD 467
Score = 156 (60.0 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 39/133 (29%), Positives = 63/133 (47%)
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVDSDVSH-PKLIDALKNINVELVACGEHHTCAVTL 374
H L+ + +G G+LG D ++ P +I AL+ +N+ A G HHT +T
Sbjct: 127 HTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTD 186
Query: 375 SGDMYTWGGSNCNFGLLGHGN-EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 433
+G +Y G + G G GN +++ P +N G + + CG + ++ G L
Sbjct: 187 TGTVYACGENKS--GQCGVGNTHANIYSPTPIN--YRGPPIIRIGCGAEFSVILDIKGSL 242
Query: 434 FTFGDGTFGVLGH 446
TFG +G LGH
Sbjct: 243 HTFGLPEYGQLGH 255
Score = 125 (49.1 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 582 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL--KDKQVKSIVC 639
+ + ACG+ H + S+ VY+WG G GRLGH + D P L++ + + +S+ C
Sbjct: 299 IVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFC 358
Query: 640 GTSFTAAI 647
G++F+ +
Sbjct: 359 GSTFSLIV 366
Score = 112 (44.5 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 53/215 (24%), Positives = 91/215 (42%)
Query: 399 LWLPKKLNG---PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 455
L++ K G P++G+ + +CG HT + S +++++G G FG LGH + P
Sbjct: 281 LYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVP 340
Query: 456 REV---DSL-KGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXX 511
R + D+ +G R+V CG + V E+ G LF +
Sbjct: 341 RLMKFFDTQGRGGRSV--FCGSTFSLIVNEL------------GLLFLFGQNKKTG---- 382
Query: 512 XKEARLVPTCVAALVEPNFCQVSCGH-SLTVALTTTGHVYTMGSPVYGQLG--DPKANGK 568
EA + P V L N + C + S+ ++ T + SP +G+LG + + +
Sbjct: 383 --EANMYPKPVQDLSGWNITDIGCANTSIMISADDTLIAWG-ASPTFGELGIGEFQKSST 439
Query: 569 LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYT 603
+P V KL + ++ G H +L T T
Sbjct: 440 VPKEVP-KLDNIKIPQVTMGYSHTVLLVDTTHEAT 473
Score = 101 (40.6 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 31/125 (24%), Positives = 57/125 (45%)
Query: 276 LGGGIHRSGSYAGVKMDSFV---PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEE 332
LG G + SG G+ D + P + + L++ A G H +T G V++ GE
Sbjct: 138 LGFGRNPSGQL-GLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGEN 196
Query: 333 LGGRLGHG-VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLL 391
G+ G G +++ P I+ + + + CG + + + G ++T+G +G L
Sbjct: 197 KSGQCGVGNTHANIYSPTPIN-YRGPPIIRIGCGAEFSVILDIKGSLHTFGLPE--YGQL 253
Query: 392 GHGNE 396
GH +
Sbjct: 254 GHNTD 258
Score = 62 (26.9 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 417 VSCGPW--HTAVVTSAGQLFTFGDGTFGVLGHGDRISVST-PREVDSLKGLRTVRAACGV 473
V+ GP HT ++ + FG G LG I ++ P + +L+ L V+AA G
Sbjct: 119 VASGPSAAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGR 178
Query: 474 WHT 476
HT
Sbjct: 179 HHT 181
Score = 55 (24.4 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 310 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS 343
I CG + ++ +G + ++G G+LGH D+
Sbjct: 226 IGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDA 259
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 227 (85.0 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 101/368 (27%), Positives = 161/368 (43%)
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTL 374
H + T+ G V + G+ G+LG G + + P L+ ++I V+ A G H C ++
Sbjct: 27 HRSHGTEPGVVLTLGQGDVGQLGLGENVMERKKPALVSIPEDI-VQAEAGGMHTVC-LSK 84
Query: 375 SGDMYTWGGSNCNF-GLLGHGN--EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
SG +Y++G CN G LG E S +P K++ L+ V VS G HTA +T G
Sbjct: 85 SGQVYSFG---CNDEGALGRDTSVEGSEMVPGKVD--LQE-KVIQVSAGDSHTAALTEDG 138
Query: 432 QLFTFGD--GTFGVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
++F +G GV+G + + S P +V + V+ A G H ++ V
Sbjct: 139 RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--SVPVVKVASGNDHLV-MLTVDGDLYT 195
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCV-----AALVEPNFCQVSCGHSLTVAL 543
G+L E LVP CV + F CG T A+
Sbjct: 196 LGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAI 255
Query: 544 TTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEG--KLTKNFVEEIACGDYHVAVLTSRTE 600
++ GHVY G Y QLG +P + TK++V + G +H + S +
Sbjct: 256 SSEGHVYGFGLSNYHQLGTQGTESCFVPQNLTSFKNSTKSWVG-FSGGQHHTVCMDSEGK 314
Query: 601 VYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG 655
Y+ G+ GRLG G+ ++++ P+L+ L V S+ CG S A+ + W G
Sbjct: 315 AYSLGRAEYGRLGLGEGAEEKSVPTLIPRLPT--VSSVACGASVGYAVTKDGRVFAWGMG 372
Query: 656 VDQSMCSG 663
+ + +G
Sbjct: 373 TNYQLGTG 380
Score = 221 (82.9 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 87/361 (24%), Positives = 149/361 (41%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVEL--VA 363
D+ GG H ++K G+V+S+G G LG D+ V +++ ++ ++ V+
Sbjct: 68 DIVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR--DTSVEGSEMVPGKVDLQEKVIQVS 125
Query: 364 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE---GIHVSSVSCG 420
G+ HT A+T G ++ WG N G++G M KK P++ + V V+ G
Sbjct: 126 AGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPM-----KKSMVPVQVQLSVPVVKVASG 180
Query: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP-RE-VDSLKGLRTVRAAC-GVWHTA 477
H ++T G L+T G G G LG + + R+ ++ L + V G
Sbjct: 181 NDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHV 240
Query: 478 AVVEVMVGXXXXXXXXX-GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQV--S 534
+ G G ++ + E+ VP + + V S
Sbjct: 241 RFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFVPQNLTSFKNSTKSWVGFS 300
Query: 535 CGHSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHV 592
G TV + + G Y++G YG+LG + +PT + T V +ACG
Sbjct: 301 GGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIPRLPT---VSSVACGASVG 357
Query: 593 AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV--EALKDKQVKSIVCGTSFTAAICLH 650
+T V+ WG G N +LG G +D P + + L+++ V ++ G T +
Sbjct: 358 YAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
Query: 651 K 651
K
Sbjct: 418 K 418
Score = 120 (47.3 bits), Expect = 0.00091, P = 0.00091
Identities = 61/230 (26%), Positives = 100/230 (43%)
Query: 264 VFIWGECT-GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
VF+WG +G++G +K S VP V+ +V V +A G H ++T
Sbjct: 140 VFLWGSFRDNNGVIG-------LLEPMKK-SMVPVQVQLSV--PVVKVASGNDHLVMLTV 189
Query: 323 QGEVFSWGEELGGRLGH--------GVDSDVSH---PKLIDALKN------INVELVACG 365
G++++ G G+LG G + PK + LK+ + + CG
Sbjct: 190 DGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCV-MLKSRGSRGHVRFQDAFCG 248
Query: 366 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSV--SCGPWH 423
+ T A++ G +Y +G SN + LG S ++P+ L + S V S G H
Sbjct: 249 AYFTFAISSEGHVYGFGLSN--YHQLGTQGTESCFVPQNLTS-FKNSTKSWVGFSGGQHH 305
Query: 424 TAVVTSAGQLFTFGDGTFGVLGHGDRISV-STPREVDSLKGLRTVRAACG 472
T + S G+ ++ G +G LG G+ S P + L + +V ACG
Sbjct: 306 TVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIPRLPTVSSV--ACG 353
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 187 (70.9 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 53/182 (29%), Positives = 91/182 (50%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V A G +H L+T+ GEV+S+G L + + S P L AL +V VA G
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGT-LPWK-SEAAEICPSSPLLESALVGHHVVTVATGS 100
Query: 367 HHTCAVTLSGDMYTWG---GSNCNFGLLGHGNEMS-LWLPKKLNGPLEGIHVSSVSCGPW 422
H+ AVT SG +Y WG C + +E S + + PL + + ++CG
Sbjct: 101 FHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLACGEE 160
Query: 423 HTAVVTSAGQLFTFGDGT-FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
HT ++ + +++ +G G G++ V+ P++V+ L G ++ ACG +H+ A+V+
Sbjct: 161 HTLALSISREIWAWGTGCQLGLIT--TTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Query: 482 VM 483
+
Sbjct: 219 CL 220
Score = 118 (46.6 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 593 AVLTS-RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
A+L S RTEV+TWGKG G+LGHGD R P V+ L K+V + G S + A+
Sbjct: 513 ALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLAL 568
Score = 102 (41.0 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
Identities = 38/131 (29%), Positives = 56/131 (42%)
Query: 496 KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
+++TW RL P CV L + G S ++ALT VY+ GS
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSN 580
Query: 556 VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRL--G 613
+GQLG + +P R+ +++ V +A G + L TE + G +GR
Sbjct: 581 TFGQLGHSEFPTTVP-RLSKVSSESGVWSVAAGHGYSLFLVD-TEDFQPGLYYSGRQDRA 638
Query: 614 HGDTDDRNFPS 624
GDT N PS
Sbjct: 639 EGDTLPEN-PS 648
Score = 101 (40.6 bits), Expect = 8.5e-14, Sum P(3) = 8.5e-14
Identities = 27/96 (28%), Positives = 42/96 (43%)
Query: 549 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 608
V+T G GQLG +L L V + G H LT++++VY+WG
Sbjct: 522 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNT 581
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 644
G+LGH + P L + + V S+ G ++
Sbjct: 582 FGQLGHSEFPT-TVPRLSKVSSESGVWSVAAGHGYS 616
Score = 101 (40.6 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 49/203 (24%), Positives = 82/203 (40%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 461
P++L G G V + G H ++T G++++FG T I S+P +L
Sbjct: 32 PERLPG-WGGKTVLQAALGVKHGVLLTEDGEVYSFG--TLPWKSEAAEICPSSPLLESAL 88
Query: 462 KGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTC 521
G V A G +H+ AV E G ++ W ++ P+
Sbjct: 89 VGHHVVTVATGSFHSGAVTE------------SGVVYMWGENAAGQCAVANQQYVSEPSP 136
Query: 522 VAA-------LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL--PTR 572
V+ L+ Q++CG T+AL+ + ++ G+ QLG + P +
Sbjct: 137 VSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTKPQK 194
Query: 573 VEGKLTKNFVEEIACGDYHVAVL 595
VE L V ++ACG +H L
Sbjct: 195 VE-HLAGRVVLQVACGAFHSLAL 216
Score = 38 (18.4 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 1015 PAQGDEWVEQDETGVYIT 1032
P QG+ W D V +T
Sbjct: 1303 PGQGEVWKAWDNIAVALT 1320
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 226 (84.6 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 100/368 (27%), Positives = 159/368 (43%)
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTL 374
H + T+ G V + G+ G+LG G + + P L+ +++ V+ A G H C ++
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQAEAGGMHTVC-LSK 84
Query: 375 SGDMYTWGGSNCNF-GLLGHGN--EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
SG +Y++G CN G LG E S +P K+ L+ V VS G HTA +T G
Sbjct: 85 SGQVYSFG---CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAALTDDG 138
Query: 432 QLFTFGD--GTFGVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
++F +G GV+G + + S P +V + V+ A G H ++
Sbjct: 139 RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLV-MLTADGDLYT 195
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCV-----AALVEPNFCQVSCGHSLTVAL 543
G+L E LVP CV + F CG T A+
Sbjct: 196 LGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAI 255
Query: 544 TTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEG--KLTKNFVEEIACGDYHVAVLTSRTE 600
+ GHVY G Y QLG P +P + TK++V + G +H + S +
Sbjct: 256 SHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVG-FSGGQHHTVCMDSEGK 314
Query: 601 VYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWVSG 655
Y+ G+ GRLG G+ ++++ P+L+ L V S+ CG S A+ + W G
Sbjct: 315 AYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--AVSSVACGASVGYAVTKDGRVFAWGMG 372
Query: 656 VDQSMCSG 663
+ + +G
Sbjct: 373 TNYQLGTG 380
Score = 222 (83.2 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 87/359 (24%), Positives = 151/359 (42%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV--A 363
DV GG H ++K G+V+S+G G LG D+ V +++ + ++V +
Sbjct: 68 DVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR--DTSVEGSEMVPGKVELQEKVVQVS 125
Query: 364 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPW 422
G+ HT A+T G ++ WG N G++G M +P ++ L+ + V V+ G
Sbjct: 126 AGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ--LD-VPVVKVASGND 182
Query: 423 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP-RE-VDSLKGLRTVRAAC-GVWHTAAV 479
H ++T+ G L+T G G G LG + + R+ ++ L + V G
Sbjct: 183 HLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRF 242
Query: 480 VEVMVGXXXXXXXXX-GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQV--SCG 536
+ G G ++ + E+ +P + + V S G
Sbjct: 243 QDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGG 302
Query: 537 HSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAV 594
TV + + G Y++G YG+LG + +PT + +L V +ACG
Sbjct: 303 QHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS-RLPA--VSSVACGASVGYA 359
Query: 595 LTSRTEVYTWGKGANGRLGHGDTDDRNFP--SLVEALKDKQVKSIVCGTSFTAAICLHK 651
+T V+ WG G N +LG G +D P + + L+++ V S+ G T + K
Sbjct: 360 VTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDK 418
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 186 (70.5 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 55/184 (29%), Positives = 94/184 (51%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V A G +H L+T+ GEV+S+G L R G V+ S P L +AL V VA G
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGT-LPWRSGP-VEICPSSPILENALVGQYVVTVATGS 100
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN------GPLEGIHVSSVSCG 420
H+ AVT +G Y WG ++ G N+ + P ++ PL + + ++CG
Sbjct: 101 FHSGAVTDNGVAYMWGENSA--GQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACG 158
Query: 421 PWHTAVVTSAGQLFTFGDGT-FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
HT ++ + +++ +G G G++ V+ P++V+ L G ++ ACG +H+ A+
Sbjct: 159 EEHTLALSISREIWAWGTGCQLGLITTA--FPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
Query: 480 VEVM 483
V+ +
Sbjct: 217 VQCL 220
Score = 145 (56.1 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 299 VESAVVLD-VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK---LIDA- 353
+E+A+V V +A G H+ VT G + WGE G+ V P + D+
Sbjct: 84 LENALVGQYVVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSE 143
Query: 354 ---LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 410
L + + +ACGE HT A+++S +++ WG + C GL+ + P+K+ L
Sbjct: 144 ASPLLAVRILQLACGEEHTLALSISREIWAWG-TGCQLGLIT--TAFPVTKPQKVEH-LA 199
Query: 411 GIHVSSVSCGPWHT 424
G V V+CG +H+
Sbjct: 200 GRVVLQVACGAFHS 213
Score = 116 (45.9 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 29/96 (30%), Positives = 43/96 (44%)
Query: 549 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 608
V+T G GQLG +L L V + G YH LT++++VY+WG
Sbjct: 528 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNT 587
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 644
G+LGH D P L + + V S+ G ++
Sbjct: 588 FGQLGHSDFPT-TVPRLAKISSENGVWSVAAGRDYS 622
Score = 114 (45.2 bits), Expect = 5.2e-15, Sum P(3) = 5.2e-15
Identities = 29/67 (43%), Positives = 38/67 (56%)
Query: 593 AVLTS-RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG----TSFTAAI 647
A+L S RTEV+TWGKG G+LGHGD R P V+ L K+V + G + TA
Sbjct: 519 ALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKS 578
Query: 648 CLHKWVS 654
++ W S
Sbjct: 579 QVYSWGS 585
Score = 97 (39.2 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 36/129 (27%), Positives = 55/129 (42%)
Query: 496 KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
+++TW RL P CV L + G ++ALT VY+ GS
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 586
Query: 556 VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG-DYHVAVLTSRTEVYTWGKGANGRLGH 614
+GQLG +P R+ ++N V +A G DY + ++ TE + G +GR
Sbjct: 587 TFGQLGHSDFPTTVP-RLAKISSENGVWSVAAGRDYSLFLVD--TEDFQPGLYYSGR--Q 641
Query: 615 GDTDDRNFP 623
T+ N P
Sbjct: 642 DPTEGDNLP 650
Score = 88 (36.0 bits), Expect = 6.6e-05, Sum P(3) = 6.6e-05
Identities = 44/194 (22%), Positives = 76/194 (39%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 461
P++L G G V + G H ++T G++++FG T I S+P ++L
Sbjct: 32 PERLPG-WGGKTVLQAALGVKHGVLLTEDGEVYSFG--TLPWRSGPVEICPSSPILENAL 88
Query: 462 KGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTC 521
G V A G +H+ AV + V G+ + +
Sbjct: 89 VGQYVVTVATGSFHSGAVTDNGVAYMWGENSA-GQC----AVANQQYVPEPNPVSIADSE 143
Query: 522 VAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF 581
+ L+ Q++CG T+AL+ + ++ G+ L P +VE L
Sbjct: 144 ASPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTAFPVTKPQKVE-HLAGRV 202
Query: 582 VEEIACGDYHVAVL 595
V ++ACG +H L
Sbjct: 203 VLQVACGAFHSLAL 216
Score = 72 (30.4 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 432 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
+++T+G G G LGHGD + P V L G + G +H+ A+
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLAL 574
Score = 46 (21.3 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 23/108 (21%), Positives = 46/108 (42%)
Query: 866 SEEVIKLRAQVEELTRKSQLQEI--ELERTTRQLKEALAVAGEE----TAKCRAAKDVIK 919
S E + + +V E T + Q + EL + Q+ + A++ ++ T + +A+++
Sbjct: 279 STETLDRQEEVFENTLVANDQSVATELNAVSAQITSSDAMSSQQNVMGTTEISSARNIPS 338
Query: 920 SLTAQ-LKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLT 966
Q + + L +VR + P P+ + AI SP T
Sbjct: 339 YPDTQAVNEYLRKLSDHSVREDSEHGEKPMPSQPLLEEAIPNLHSPPT 386
Score = 38 (18.4 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 1015 PAQGDEWVEQDETGVYIT 1032
P QG+ W D V +T
Sbjct: 1309 PGQGEVWKAWDNIAVALT 1326
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 185 (70.2 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 55/184 (29%), Positives = 94/184 (51%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V A G +H L+T+ GEV+S+G L R G V+ S P L +AL V VA G
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGT-LPWRSGP-VEICPSSPILENALVGQYVITVATGS 100
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN------GPLEGIHVSSVSCG 420
H+ AVT +G Y WG ++ G N+ + P ++ PL + + ++CG
Sbjct: 101 FHSGAVTDNGVAYMWGENSA--GQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLACG 158
Query: 421 PWHTAVVTSAGQLFTFGDGT-FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
HT ++ + +++ +G G G++ V+ P++V+ L G ++ ACG +H+ A+
Sbjct: 159 EEHTLALSISREIWAWGTGCQLGLITTA--FPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
Query: 480 VEVM 483
V+ +
Sbjct: 217 VQCL 220
Score = 144 (55.7 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 299 VESAVVLD-VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK---LIDA- 353
+E+A+V V +A G H+ VT G + WGE G+ V P + D+
Sbjct: 84 LENALVGQYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSE 143
Query: 354 ---LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 410
L + + +ACGE HT A+++S +++ WG + C GL+ + P+K+ L
Sbjct: 144 ASPLLAVRILQLACGEEHTLALSISREIWAWG-TGCQLGLIT--TAFPVTKPQKVEH-LA 199
Query: 411 GIHVSSVSCGPWHT 424
G V V+CG +H+
Sbjct: 200 GRVVLQVACGAFHS 213
Score = 117 (46.2 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 30/96 (31%), Positives = 43/96 (44%)
Query: 549 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 608
V+T G GQLG +L L V + G YH LT++++VY+WG
Sbjct: 528 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNT 587
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 644
G+LGH D P L + + V SI G ++
Sbjct: 588 FGQLGHSDFPT-TVPRLAKISSENGVWSIAAGRDYS 622
Score = 114 (45.2 bits), Expect = 6.7e-15, Sum P(3) = 6.7e-15
Identities = 29/67 (43%), Positives = 38/67 (56%)
Query: 593 AVLTS-RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG----TSFTAAI 647
A+L S RTEV+TWGKG G+LGHGD R P V+ L K+V + G + TA
Sbjct: 519 ALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKS 578
Query: 648 CLHKWVS 654
++ W S
Sbjct: 579 QVYSWGS 585
Score = 98 (39.6 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 37/129 (28%), Positives = 55/129 (42%)
Query: 496 KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
+++TW RL P CV L + G ++ALT VY+ GS
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 586
Query: 556 VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG-DYHVAVLTSRTEVYTWGKGANGRLGH 614
+GQLG +P R+ ++N V IA G DY + ++ TE + G +GR
Sbjct: 587 TFGQLGHSDFPTTVP-RLAKISSENGVWSIAAGRDYSLFLVD--TEDFQPGLYYSGR--Q 641
Query: 615 GDTDDRNFP 623
T+ N P
Sbjct: 642 DPTEGDNLP 650
Score = 87 (35.7 bits), Expect = 8.3e-05, Sum P(3) = 8.3e-05
Identities = 43/194 (22%), Positives = 76/194 (39%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 461
P++L G G V + G H ++T G++++FG T I S+P ++L
Sbjct: 32 PERLPG-WGGKTVLQAALGVKHGVLLTEDGEVYSFG--TLPWRSGPVEICPSSPILENAL 88
Query: 462 KGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTC 521
G + A G +H+ AV + V G+ + +
Sbjct: 89 VGQYVITVATGSFHSGAVTDNGVAYMWGENSA-GQC----AVANQQYVPEPNPVSIADSE 143
Query: 522 VAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF 581
+ L+ Q++CG T+AL+ + ++ G+ L P +VE L
Sbjct: 144 ASPLLAVRILQLACGEEHTLALSISREIWAWGTGCQLGLITTAFPVTKPQKVE-HLAGRV 202
Query: 582 VEEIACGDYHVAVL 595
V ++ACG +H L
Sbjct: 203 VLQVACGAFHSLAL 216
Score = 72 (30.4 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 432 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
+++T+G G G LGHGD + P V L G + G +H+ A+
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLAL 574
Score = 47 (21.6 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 23/108 (21%), Positives = 46/108 (42%)
Query: 866 SEEVIKLRAQVEELTRKSQLQEI--ELERTTRQLKEALAVAGEE----TAKCRAAKDVIK 919
S E + + +V E T + Q + EL + Q+ + A++ ++ T + +A+++
Sbjct: 279 STETLDRQEEVFENTLVANDQSVATELNAVSAQITSSDAMSSQQNVMGTTEISSARNIPS 338
Query: 920 SLTAQ-LKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLT 966
Q + + L +VR + P P+ + AI SP T
Sbjct: 339 YPDTQAVNEYLRKLSDHSVREDSEHGEKPVPSQPLLEEAIPNLHSPPT 386
Score = 38 (18.4 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 1015 PAQGDEWVEQDETGVYIT 1032
P QG+ W D V +T
Sbjct: 1309 PGQGEVWKAWDNIAVALT 1326
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 229 (85.7 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 77/318 (24%), Positives = 139/318 (43%)
Query: 313 GGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAV 372
G + ++T G V+S G G+ GH DV P I L N ++ +ACG HH+ A+
Sbjct: 202 GQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAM 261
Query: 373 TLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE--GIH--VSSVSCGPWHTAVVT 428
G +Y+WG N G LG GN+ S+ L + G + ++++ G ++ ++
Sbjct: 262 DDLGQVYSWG--NGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILG 319
Query: 429 SAGQLFTFGDGTFGVLGHGDRISV----STPREVDSLKGLRTVRAACGVWHTAAVVEVMV 484
S G +++FG LG+ + STP+++ S+ ++++ AC WH+ +++
Sbjct: 320 SNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQMKSI--ACASWHSV-FLDLKG 376
Query: 485 GXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALV--EPNFCQVSCGHSLTVA 542
G+L + + + + E Q++CG + T
Sbjct: 377 RVYTCGSSTNGRL---GRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFTTV 433
Query: 543 LTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF----VEEIACGDYHVAVLTSR 598
L+ +G +Y+ G QLG G + KL + A GD HV L+ +
Sbjct: 434 LSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHSFAVGDQHVVALSDQ 493
Query: 599 TEVYTWGKGANGRLGHGD 616
EV+ +G + + G G+
Sbjct: 494 GEVFCYGDNSTLQCGFGE 511
Score = 191 (72.3 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 79/305 (25%), Positives = 129/305 (42%)
Query: 278 GGIHRSG--SYAGV----KMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 331
G ++ SG SY K D +P + +++IACG H+ + G+V+SWG
Sbjct: 213 GAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAMDDLGQVYSWGN 272
Query: 332 ELGGRLGHGVD-SDVSHPKLIDALKNINV-EL---VACGEHHTCAVTLSGDMYTWGGSNC 386
GRLG G D S V P LI + E+ +A G ++ + +GD+Y++G SN
Sbjct: 273 GASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFG-SNL 331
Query: 387 NFGLLGHGN-EMSLWL---PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFG 442
++ L G+ + +L PKK+ L+ + S++C WH+ + G+++T G T G
Sbjct: 332 HYKL-GYKECDGALGFQSTPKKIPSILQ---MKSIACASWHSVFLDLKGRVYTCGSSTNG 387
Query: 443 VLGHG---------DRISVSTPREVDSLKGLRTVRA-ACGVWHTAAVVEVMVGXXXXXXX 492
LG +R+S++ + +L ++ ACG T + E
Sbjct: 388 RLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSE----------- 436
Query: 493 XXGKLFTWXXXXXXXXXXXX----KEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGH 548
G L++W E P V AL + G VAL+ G
Sbjct: 437 -SGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHSFAVGDQHVVALSDQGE 495
Query: 549 VYTMG 553
V+ G
Sbjct: 496 VFCYG 500
Score = 177 (67.4 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 62/255 (24%), Positives = 106/255 (41%)
Query: 420 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
G + ++T G +++ G ++G GH + V P ++ L R ACG H+ A+
Sbjct: 202 GQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAM 261
Query: 480 VEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNF------CQV 533
++ G++++W + +VPT V F +
Sbjct: 262 DDL------------GQVYSWGNGASGRLGLG-NDFSIVPTPTLISVINRFGSNEIATAI 308
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVE--EIACGDYH 591
+ G ++ L + G VY+ GS ++ +LG + +G L + K + ++ IAC +H
Sbjct: 309 AAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQMKSIACASWH 368
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGDTDDRNF-PSLVEALKDKQ---------VKSIVCGT 641
L + VYT G NGRLG + +F P V K +K I CGT
Sbjct: 369 SVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGT 428
Query: 642 SFTAAIC----LHKW 652
+FT + L+ W
Sbjct: 429 NFTTVLSESGSLYSW 443
Score = 154 (59.3 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 36/100 (36%), Positives = 54/100 (54%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDY 590
Q G + + LT TG VY+ G YG+ G K L PT++ +L+ ++ IACG +
Sbjct: 198 QTEFGQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVLIPTQIL-ELSNKRIKSIACGTH 256
Query: 591 HVAVLTSRTEVYTWGKGANGRLGHG-DTDDRNFPSLVEAL 629
H + +VY+WG GA+GRLG G D P+L+ +
Sbjct: 257 HSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVI 296
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 249 (92.7 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 102/367 (27%), Positives = 152/367 (41%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V ++A GG H + G +++ G G+LG G + + P + + VA G
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPG----TWKTVAAGT 89
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 426
H+ + G ++ WG SN FG LG P +NG L S + G + V
Sbjct: 90 THSLGIKADGSLWAWG-SNL-FGQLGQ--------PL-VNGQLATNKFSPIRIGTGNDWV 138
Query: 427 VTSAGQLFTFG---DGT--------FGVLGHGDRISVSTPREV--DSLKGLRTVRAACGV 473
SAG+L +FG DGT FG LG G +S P +V D L R V A G
Sbjct: 139 AVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGG 198
Query: 474 WHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQV 533
H A+ G L+ W PT + + ++ +
Sbjct: 199 EHALAL------------QADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAI 246
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLGD----PKANGKLPTRVEGKLTKNFVEEIACGD 589
S G +VAL G +++ G ++G+LG+ P AN PTRV G ++V IA G
Sbjct: 247 SAGEMHSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRV-GT-GSDWVA-IAAGA 303
Query: 590 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA-LKDKQVKSIVCGTSFTAAIC 648
H L V WG A G +G G +R+ P+L+ A + +I GT + ++
Sbjct: 304 LHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVL 363
Query: 649 LHKWVSG 655
+ V G
Sbjct: 364 ANGTVFG 370
Score = 218 (81.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 81/323 (25%), Positives = 138/323 (42%)
Query: 310 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 369
+A GG HA + G +++WG L G+LG G + +P + + + ++ GE H+
Sbjct: 194 VAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHS 253
Query: 370 CAVTLSGDMYTWGGSNCNFGLLGHGNEM---SLWLPKKLNGPLEGIHVSSVSCGPWHTAV 426
A+ G +++WG N FG LG+G + ++ P ++ + + +++ G HT
Sbjct: 254 VALKADGSLWSWG-QNL-FGELGNGVALPGANVTTPTRVGTGSDWV---AIAAGALHTVA 308
Query: 427 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL-RTVRAACGVWHTAAVVEVMVG 485
+ G + +G+ G +G G + STP + + L V A G T V+
Sbjct: 309 LHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAG---TGVSFSVLAN 365
Query: 486 XXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 545
G +F W A PT ++A + V G + ++ L +
Sbjct: 366 ---------GTVFGWGGNGAGQLGNGTFGAVTAPTVLSAGASA-WLGVEPGGAFSLGLRS 415
Query: 546 TGHVYTMGSPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 603
G ++ G GQLGD +P V G N+ A G H VAV T ++
Sbjct: 416 NGTLWAWGGNASGQLGDGTTTPSAIPVPVVGG-AGNW-RTTATGTAHSVAVRADGT-LWA 472
Query: 604 WGKGANGRLGHGDTDDRNFPSLV 626
WG ++G+LG G T + P +
Sbjct: 473 WGDNSSGQLGIGSTVAASTPQQI 495
Score = 200 (75.5 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 93/377 (24%), Positives = 149/377 (39%)
Query: 288 GVKMDSFVPKAVESAVVLDVQNIA-CGGRHAAL-VTKQGEVFSWGEELGGRLGHGVDSDV 345
G + P + + V L V N+A G + V G VF WG G+LG+G V
Sbjct: 329 GTVANRSTPTLIVAPVTL-VNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAV 387
Query: 346 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 405
+ P ++ A + + V G + + +G ++ WGG N + G LG G +P +
Sbjct: 388 TAPTVLSAGASAWLG-VEPGGAFSLGLRSNGTLWAWGG-NAS-GQLGDGTTTPSAIPVPV 444
Query: 406 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR 465
G ++ G H+ V + G L+ +GD + G LG G ++ STP+++
Sbjct: 445 VGGAGNWRTTAT--GTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITV----- 497
Query: 466 TVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEA-RLVPTCVAA 524
T A+ G TA G G L++W + R P +
Sbjct: 498 TNPASAGNDWTAVAGG---GAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVT 554
Query: 525 ----LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD------PKANGKLPTR-- 572
+ N+ V+ G ++AL G ++T G QLG P +P +
Sbjct: 555 GNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLA 614
Query: 573 VEGKLTKNFVEE---IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 629
V + F IA G H L + ++ WG + G+LG+G T P V
Sbjct: 615 VASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINA 674
Query: 630 KDKQVKSIVCGTSFTAA 646
+ S+ GTS + A
Sbjct: 675 EGVPYVSLAAGTSHSLA 691
Score = 192 (72.6 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 93/378 (24%), Positives = 152/378 (40%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG G G LG +G++ V + V A SA + + GG + +
Sbjct: 368 VFGWGG-NGAGQLG-----NGTFGAVTAPT-VLSAGASAWL----GVEPGGAFSLGLRSN 416
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G +++WG G+LG G + + P + N A G H+ AV G ++ WG
Sbjct: 417 GTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAG-NWRTTATGTAHSVAVRADGTLWAWGD 475
Query: 384 SNCNFGLLGHGNEMSLWLPKKL---NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 440
++ G LG G+ ++ P+++ N G ++V+ G H+ + + G L+++GD T
Sbjct: 476 NSS--GQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNT 533
Query: 441 FGVLGHGDRISV-STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFT 499
FG LG G S +TP ++ V G + V G G ++T
Sbjct: 534 FGQLGDGTGTSNRTTPVQI--------VTGNPGNFDRNWVAVAAGGVFSLALQADGTIWT 585
Query: 500 WXXXXXXXXXX-----XXKEARLVPTCVAALVEPN------FCQVSCGHSLTVALTTTGH 548
W R VP +A P+ + ++ G ++L G
Sbjct: 586 WGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGT 645
Query: 549 VYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 607
++ G+ GQLG+ P +V +V +A G H S ++ WG
Sbjct: 646 LWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVS-LAAGTSHSLAGRSDGTLWAWGNN 704
Query: 608 ANGRLG---H-GDTDDRN 621
+G+LG H GD D N
Sbjct: 705 TSGQLGTGPHPGDADPLN 722
Score = 145 (56.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 69/286 (24%), Positives = 117/286 (40%)
Query: 362 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKL---N-GPLEGIHVSS 416
VA G H+ + G +++WG + FG LG G S P ++ N G + V+
Sbjct: 510 VAGGGAHSLGLKADGTLWSWGDNT--FGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVA- 566
Query: 417 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 476
V+ G + + + G ++T+GD + LG ++ TP ++ V +
Sbjct: 567 VAAGGVFSLALQADGTIWTWGDNSLLQLGTDP--AMLTPATQRNVPAQLAVASPPSTAFN 624
Query: 477 AAVVEVMVGXXXXXXXXX-GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSC 535
++ V + G G L+ W A P V + ++
Sbjct: 625 SSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAA 684
Query: 536 GHSLTVALTTTGHVYTMGSPVYGQLG------DPKANGKLPTRVEGK-LTKNFVEE---- 584
G S ++A + G ++ G+ GQLG D P V + LT N V
Sbjct: 685 GTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDW 744
Query: 585 -IA-CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS-LVE 627
+A G H A L S ++TWG+ +G+LG+G T + + P+ L+E
Sbjct: 745 LVATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPTALLE 790
Score = 39 (18.8 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 17/77 (22%), Positives = 35/77 (45%)
Query: 747 GENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSN 806
G N + + V G L+ +++G +N + + T NG+ A NN+ ++
Sbjct: 1563 GTNGTTPALVAVGDFGTVLRSIDNG---QNWTEVTSGTINFAELNGI----AFNNTSNTY 1615
Query: 807 PVFGSTKKFFSASLPGS 823
G T + F+++ G+
Sbjct: 1616 AAIGITSEVFTSTDNGA 1632
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 249 (92.7 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 102/367 (27%), Positives = 152/367 (41%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V ++A GG H + G +++ G G+LG G + + P + + VA G
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPG----TWKTVAAGT 89
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 426
H+ + G ++ WG SN FG LG P +NG L S + G + V
Sbjct: 90 THSLGIKADGSLWAWG-SNL-FGQLGQ--------PL-VNGQLATNKFSPIRIGTGNDWV 138
Query: 427 VTSAGQLFTFG---DGT--------FGVLGHGDRISVSTPREV--DSLKGLRTVRAACGV 473
SAG+L +FG DGT FG LG G +S P +V D L R V A G
Sbjct: 139 AVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGG 198
Query: 474 WHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQV 533
H A+ G L+ W PT + + ++ +
Sbjct: 199 EHALAL------------QADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAI 246
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLGD----PKANGKLPTRVEGKLTKNFVEEIACGD 589
S G +VAL G +++ G ++G+LG+ P AN PTRV G ++V IA G
Sbjct: 247 SAGEMHSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRV-GT-GSDWVA-IAAGA 303
Query: 590 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEA-LKDKQVKSIVCGTSFTAAIC 648
H L V WG A G +G G +R+ P+L+ A + +I GT + ++
Sbjct: 304 LHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVL 363
Query: 649 LHKWVSG 655
+ V G
Sbjct: 364 ANGTVFG 370
Score = 218 (81.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 81/323 (25%), Positives = 138/323 (42%)
Query: 310 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHT 369
+A GG HA + G +++WG L G+LG G + +P + + + ++ GE H+
Sbjct: 194 VAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHS 253
Query: 370 CAVTLSGDMYTWGGSNCNFGLLGHGNEM---SLWLPKKLNGPLEGIHVSSVSCGPWHTAV 426
A+ G +++WG N FG LG+G + ++ P ++ + + +++ G HT
Sbjct: 254 VALKADGSLWSWG-QNL-FGELGNGVALPGANVTTPTRVGTGSDWV---AIAAGALHTVA 308
Query: 427 VTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL-RTVRAACGVWHTAAVVEVMVG 485
+ G + +G+ G +G G + STP + + L V A G T V+
Sbjct: 309 LHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAG---TGVSFSVLAN 365
Query: 486 XXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTT 545
G +F W A PT ++A + V G + ++ L +
Sbjct: 366 ---------GTVFGWGGNGAGQLGNGTFGAVTAPTVLSAGASA-WLGVEPGGAFSLGLRS 415
Query: 546 TGHVYTMGSPVYGQLGDPKAN-GKLPTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYT 603
G ++ G GQLGD +P V G N+ A G H VAV T ++
Sbjct: 416 NGTLWAWGGNASGQLGDGTTTPSAIPVPVVGG-AGNW-RTTATGTAHSVAVRADGT-LWA 472
Query: 604 WGKGANGRLGHGDTDDRNFPSLV 626
WG ++G+LG G T + P +
Sbjct: 473 WGDNSSGQLGIGSTVAASTPQQI 495
Score = 200 (75.5 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 93/377 (24%), Positives = 149/377 (39%)
Query: 288 GVKMDSFVPKAVESAVVLDVQNIA-CGGRHAAL-VTKQGEVFSWGEELGGRLGHGVDSDV 345
G + P + + V L V N+A G + V G VF WG G+LG+G V
Sbjct: 329 GTVANRSTPTLIVAPVTL-VNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAV 387
Query: 346 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKL 405
+ P ++ A + + V G + + +G ++ WGG N + G LG G +P +
Sbjct: 388 TAPTVLSAGASAWLG-VEPGGAFSLGLRSNGTLWAWGG-NAS-GQLGDGTTTPSAIPVPV 444
Query: 406 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLR 465
G ++ G H+ V + G L+ +GD + G LG G ++ STP+++
Sbjct: 445 VGGAGNWRTTAT--GTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITV----- 497
Query: 466 TVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEA-RLVPTCVAA 524
T A+ G TA G G L++W + R P +
Sbjct: 498 TNPASAGNDWTAVAGG---GAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVT 554
Query: 525 ----LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD------PKANGKLPTR-- 572
+ N+ V+ G ++AL G ++T G QLG P +P +
Sbjct: 555 GNPGNFDRNWVAVAAGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLA 614
Query: 573 VEGKLTKNFVEE---IACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 629
V + F IA G H L + ++ WG + G+LG+G T P V
Sbjct: 615 VASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINA 674
Query: 630 KDKQVKSIVCGTSFTAA 646
+ S+ GTS + A
Sbjct: 675 EGVPYVSLAAGTSHSLA 691
Score = 192 (72.6 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 93/378 (24%), Positives = 152/378 (40%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
VF WG G G LG +G++ V + V A SA + + GG + +
Sbjct: 368 VFGWGG-NGAGQLG-----NGTFGAVTAPT-VLSAGASAWL----GVEPGGAFSLGLRSN 416
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G +++WG G+LG G + + P + N A G H+ AV G ++ WG
Sbjct: 417 GTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAG-NWRTTATGTAHSVAVRADGTLWAWGD 475
Query: 384 SNCNFGLLGHGNEMSLWLPKKL---NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 440
++ G LG G+ ++ P+++ N G ++V+ G H+ + + G L+++GD T
Sbjct: 476 NSS--GQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNT 533
Query: 441 FGVLGHGDRISV-STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFT 499
FG LG G S +TP ++ V G + V G G ++T
Sbjct: 534 FGQLGDGTGTSNRTTPVQI--------VTGNPGNFDRNWVAVAAGGVFSLALQADGTIWT 585
Query: 500 WXXXXXXXXXX-----XXKEARLVPTCVAALVEPN------FCQVSCGHSLTVALTTTGH 548
W R VP +A P+ + ++ G ++L G
Sbjct: 586 WGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGT 645
Query: 549 VYTMGSPVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKG 607
++ G+ GQLG+ P +V +V +A G H S ++ WG
Sbjct: 646 LWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVS-LAAGTSHSLAGRSDGTLWAWGNN 704
Query: 608 ANGRLG---H-GDTDDRN 621
+G+LG H GD D N
Sbjct: 705 TSGQLGTGPHPGDADPLN 722
Score = 145 (56.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 69/286 (24%), Positives = 117/286 (40%)
Query: 362 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKL---N-GPLEGIHVSS 416
VA G H+ + G +++WG + FG LG G S P ++ N G + V+
Sbjct: 510 VAGGGAHSLGLKADGTLWSWGDNT--FGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVA- 566
Query: 417 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 476
V+ G + + + G ++T+GD + LG ++ TP ++ V +
Sbjct: 567 VAAGGVFSLALQADGTIWTWGDNSLLQLGTDP--AMLTPATQRNVPAQLAVASPPSTAFN 624
Query: 477 AAVVEVMVGXXXXXXXXX-GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSC 535
++ V + G G L+ W A P V + ++
Sbjct: 625 SSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAA 684
Query: 536 GHSLTVALTTTGHVYTMGSPVYGQLG------DPKANGKLPTRVEGK-LTKNFVEE---- 584
G S ++A + G ++ G+ GQLG D P V + LT N V
Sbjct: 685 GTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDW 744
Query: 585 -IA-CGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS-LVE 627
+A G H A L S ++TWG+ +G+LG+G T + + P+ L+E
Sbjct: 745 LVATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPTALLE 790
Score = 39 (18.8 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 17/77 (22%), Positives = 35/77 (45%)
Query: 747 GENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSN 806
G N + + V G L+ +++G +N + + T NG+ A NN+ ++
Sbjct: 1563 GTNGTTPALVAVGDFGTVLRSIDNG---QNWTEVTSGTINFAELNGI----AFNNTSNTY 1615
Query: 807 PVFGSTKKFFSASLPGS 823
G T + F+++ G+
Sbjct: 1616 AAIGITSEVFTSTDNGA 1632
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 183 (69.5 bits), Expect = 6.7e-15, Sum P(3) = 6.7e-15
Identities = 56/198 (28%), Positives = 97/198 (48%)
Query: 293 SFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 352
S P+ + V A G H L+T+ GEV+S+G+ L R G + + P L +
Sbjct: 29 SVTPERLPGLCGKTVLQAALGTNHGLLLTEGGEVYSFGK-LPWRSGPE-EFCANSPILEN 86
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN------ 406
L +V VA G H AVT G +Y WG N + G N+ + P+ ++
Sbjct: 87 TLLGQHVITVAAGSFHNGAVTEGGVVYMWG--NNSSGQCAVANQPYVPEPQPISISDSET 144
Query: 407 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT-FGVLGHGDRISVSTPREVDSLKGLR 465
PL + V ++CG HT ++ + +++ +G G G++ V+ P++V+ L G
Sbjct: 145 SPLLSVRVLQLACGEEHTLALSLSREIWAWGSGCQLGLIT--TTFPVTKPQKVEHLAGRV 202
Query: 466 TVRAACGVWHTAAVVEVM 483
++ ACG +H+ A+V+ +
Sbjct: 203 VLQIACGAYHSLALVQCL 220
Score = 113 (44.8 bits), Expect = 6.7e-15, Sum P(3) = 6.7e-15
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 593 AVLTS-RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG----TSFTAAI 647
A+L S RTEV++WG+G +G+LGHGD R P V++L K+V + G + TA
Sbjct: 514 ALLPSLRTEVWSWGRGKDGQLGHGDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKS 573
Query: 648 CLHKWVSGV 656
++ W S +
Sbjct: 574 QVYSWGSNI 582
Score = 100 (40.3 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 27/96 (28%), Positives = 46/96 (47%)
Query: 549 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 608
V++ G GQLG +L L V +++ G +H LT++++VY+WG
Sbjct: 523 VWSWGRGKDGQLGHGDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSNI 582
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 644
G+LGH ++ P L + D V S G+ ++
Sbjct: 583 FGQLGHTNSPT-TVPRLAKVCGDG-VWSTAAGSDYS 616
Score = 97 (39.2 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 28/76 (36%), Positives = 40/76 (52%)
Query: 516 RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEG 575
RL P CV +L Q+S G ++ALT VY+ GS ++GQLG + +P R+
Sbjct: 542 RLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSNIFGQLGHTNSPTTVP-RL-A 599
Query: 576 KLTKNFVEEIACG-DY 590
K+ + V A G DY
Sbjct: 600 KVCGDGVWSTAAGSDY 615
Score = 41 (19.5 bits), Expect = 6.7e-15, Sum P(3) = 6.7e-15
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 1015 PAQGDEWVEQDETGVYIT 1032
P +GD W D V +T
Sbjct: 1301 PGEGDRWKAWDNIAVALT 1318
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 202 (76.2 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 77/286 (26%), Positives = 121/286 (42%)
Query: 310 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN-VELVACGEHH 368
I+ G H VT G VF+WG G+LG ++S + ++ IN + VA G +H
Sbjct: 99 ISAGRSHTVSVTDDGRVFAWGSNEHGQLG--MESKFTWQGTPRRVQEINDIVQVASGSNH 156
Query: 369 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 428
A+ G ++ WG G + P+ + L G+ + V G H ++
Sbjct: 157 CIALDEGGRVFVWGEQ-------ADGR--CIHRPEPVE-QLSGVPIVRVLAGARHCLALS 206
Query: 429 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
++G +FT+G G LG D ++ + V + GL V AACG HT +
Sbjct: 207 ASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHC------ 260
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 547
G+ F++ K E R PT V+ L+ + +++ G T+A+ G
Sbjct: 261 ------GRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAICK-G 313
Query: 548 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF--VEEIACGDYH 591
Y G GQLG NGK+ T+ + T V + G YH
Sbjct: 314 APYPFGLNSSGQLG----NGKIMTQSTPRKTDELDHVTGVFAG-YH 354
Score = 191 (72.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 50/169 (29%), Positives = 78/169 (46%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG---VDSDVSHPKLID 352
P+ VE + + + G RH ++ G VF+WG+ G LG + V H +D
Sbjct: 181 PEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMD 240
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 412
L V ACG++HT +T G +++G G G G ++ L G
Sbjct: 241 GL---GVVEAACGDNHTVLLTHCGRTFSFGSDA--LGQCGFGKKVEKRTNPTAVSDLIGS 295
Query: 413 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 461
HV+ ++ G HT + G + FG + G LG+G ++ STPR+ D L
Sbjct: 296 HVTRIAAGACHTIAICK-GAPYPFGLNSSGQLGNGKIMTQSTPRKTDEL 343
Score = 165 (63.1 bits), Expect = 7.4e-15, Sum P(3) = 7.4e-15
Identities = 56/215 (26%), Positives = 99/215 (46%)
Query: 275 ILGGGIHRSGSYAGVKMDSF---VPKAVESAVV-LD---VQNIACGGRHAALVTKQGEVF 327
+LG G H GV++ VP+ + A +D V ++ CG +H +TK G+++
Sbjct: 5 LLGCG-HTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMW 63
Query: 328 SWGEELGGRLGHGVDSDVSHPKL-IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
S G + G+LG G ++ S + + + ++ G HT +VT G ++ WG SN
Sbjct: 64 SVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWG-SN- 121
Query: 387 NFGLLGHGNEMSLW--LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 444
G LG ++ + W P+++ + + V+S G H + G++F +G+
Sbjct: 122 EHGQLGMESKFT-WQGTPRRVQEINDIVQVAS---GSNHCIALDEGGRVFVWGE------ 171
Query: 445 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
D + P V+ L G+ VR G H A+
Sbjct: 172 -QADGRCIHRPEPVEQLSGVPIVRVLAGARHCLAL 205
Score = 126 (49.4 bits), Expect = 7.4e-15, Sum P(3) = 7.4e-15
Identities = 36/118 (30%), Positives = 53/118 (44%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH 591
+V G +AL+ +G V+T G G+LG + + ++ V E ACGD H
Sbjct: 194 RVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNH 253
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 648
+LT +++G A G+ G G + R P+ V L V I G T AIC
Sbjct: 254 TVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC 311
Score = 115 (45.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 45/180 (25%), Positives = 67/180 (37%)
Query: 452 VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXX 511
+ P V+ L G+ VR G H A+ G +FTW
Sbjct: 178 IHRPEPVEQLSGVPIVRVLAGARHCLAL------------SASGAVFTWGQNNSGELGID 225
Query: 512 XKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-- 569
+ V + + +CG + TV LT G ++ GS GQ G K K
Sbjct: 226 DLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTN 285
Query: 570 PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 629
PT V L + V IA G H + Y +G ++G+LG+G ++ P + L
Sbjct: 286 PTAVSD-LIGSHVTRIAAGACHTIAICKGAP-YPFGLNSSGQLGNGKIMTQSTPRKTDEL 343
Score = 113 (44.8 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 35/111 (31%), Positives = 53/111 (47%)
Query: 273 DGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEE 332
DG LG G GS+ S P + S+ + +Q I+ G H VT G VF+WG
Sbjct: 70 DGQLGRGSRTEGSF------SIYPVSWTSSAKI-IQ-ISAGRSHTVSVTDDGRVFAWGSN 121
Query: 333 LGGRLGHGVDSDVSHPKLIDALKNIN-VELVACGEHHTCAVTLSGDMYTWG 382
G+LG ++S + ++ IN + VA G +H A+ G ++ WG
Sbjct: 122 EHGQLG--MESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWG 170
Score = 39 (18.8 bits), Expect = 7.4e-15, Sum P(3) = 7.4e-15
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 785 RGLPLPNGVSQGNALNNSK 803
+G P P G++ L N K
Sbjct: 312 KGAPYPFGLNSSGQLGNGK 330
Score = 37 (18.1 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 264 VFIWGECTGDG 274
VF+WGE DG
Sbjct: 166 VFVWGE-QADG 175
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 202 (76.2 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 77/286 (26%), Positives = 121/286 (42%)
Query: 310 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNIN-VELVACGEHH 368
I+ G H VT G VF+WG G+LG ++S + ++ IN + VA G +H
Sbjct: 99 ISAGRSHTVSVTDDGRVFAWGSNEHGQLG--MESKFTWQGTPRRVQEINDIVQVASGSNH 156
Query: 369 TCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVT 428
A+ G ++ WG G + P+ + L G+ + V G H ++
Sbjct: 157 CIALDEGGRVFVWGEQ-------ADGR--CIHRPEPVE-QLSGVPIVRVLAGARHCLALS 206
Query: 429 SAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
++G +FT+G G LG D ++ + V + GL V AACG HT +
Sbjct: 207 ASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHC------ 260
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXK-EARLVPTCVAALVEPNFCQVSCGHSLTVALTTTG 547
G+ F++ K E R PT V+ L+ + +++ G T+A+ G
Sbjct: 261 ------GRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAICK-G 313
Query: 548 HVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF--VEEIACGDYH 591
Y G GQLG NGK+ T+ + T V + G YH
Sbjct: 314 APYPFGLNSSGQLG----NGKIMTQSTPRKTDELDHVTGVFAG-YH 354
Score = 191 (72.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 50/169 (29%), Positives = 78/169 (46%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG---VDSDVSHPKLID 352
P+ VE + + + G RH ++ G VF+WG+ G LG + V H +D
Sbjct: 181 PEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMD 240
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 412
L V ACG++HT +T G +++G G G G ++ L G
Sbjct: 241 GL---GVVEAACGDNHTVLLTHCGRTFSFGSDA--LGQCGFGKKVEKRTNPTAVSDLIGS 295
Query: 413 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 461
HV+ ++ G HT + G + FG + G LG+G ++ STPR+ D L
Sbjct: 296 HVTRIAAGACHTIAICK-GAPYPFGLNSSGQLGNGKIMTQSTPRKTDEL 343
Score = 165 (63.1 bits), Expect = 7.4e-15, Sum P(3) = 7.4e-15
Identities = 56/215 (26%), Positives = 99/215 (46%)
Query: 275 ILGGGIHRSGSYAGVKMDSF---VPKAVESAVV-LD---VQNIACGGRHAALVTKQGEVF 327
+LG G H GV++ VP+ + A +D V ++ CG +H +TK G+++
Sbjct: 5 LLGCG-HTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMW 63
Query: 328 SWGEELGGRLGHGVDSDVSHPKL-IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
S G + G+LG G ++ S + + + ++ G HT +VT G ++ WG SN
Sbjct: 64 SVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWG-SN- 121
Query: 387 NFGLLGHGNEMSLW--LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 444
G LG ++ + W P+++ + + V+S G H + G++F +G+
Sbjct: 122 EHGQLGMESKFT-WQGTPRRVQEINDIVQVAS---GSNHCIALDEGGRVFVWGE------ 171
Query: 445 GHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
D + P V+ L G+ VR G H A+
Sbjct: 172 -QADGRCIHRPEPVEQLSGVPIVRVLAGARHCLAL 205
Score = 126 (49.4 bits), Expect = 7.4e-15, Sum P(3) = 7.4e-15
Identities = 36/118 (30%), Positives = 53/118 (44%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYH 591
+V G +AL+ +G V+T G G+LG + + ++ V E ACGD H
Sbjct: 194 RVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNH 253
Query: 592 VAVLTSRTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 648
+LT +++G A G+ G G + R P+ V L V I G T AIC
Sbjct: 254 TVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC 311
Score = 115 (45.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 45/180 (25%), Positives = 67/180 (37%)
Query: 452 VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXX 511
+ P V+ L G+ VR G H A+ G +FTW
Sbjct: 178 IHRPEPVEQLSGVPIVRVLAGARHCLAL------------SASGAVFTWGQNNSGELGID 225
Query: 512 XKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-- 569
+ V + + +CG + TV LT G ++ GS GQ G K K
Sbjct: 226 DLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTN 285
Query: 570 PTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 629
PT V L + V IA G H + Y +G ++G+LG+G ++ P + L
Sbjct: 286 PTAVSD-LIGSHVTRIAAGACHTIAICKGAP-YPFGLNSSGQLGNGKIMTQSTPRKTDEL 343
Score = 113 (44.8 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 35/111 (31%), Positives = 53/111 (47%)
Query: 273 DGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEE 332
DG LG G GS+ S P + S+ + +Q I+ G H VT G VF+WG
Sbjct: 70 DGQLGRGSRTEGSF------SIYPVSWTSSAKI-IQ-ISAGRSHTVSVTDDGRVFAWGSN 121
Query: 333 LGGRLGHGVDSDVSHPKLIDALKNIN-VELVACGEHHTCAVTLSGDMYTWG 382
G+LG ++S + ++ IN + VA G +H A+ G ++ WG
Sbjct: 122 EHGQLG--MESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWG 170
Score = 39 (18.8 bits), Expect = 7.4e-15, Sum P(3) = 7.4e-15
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 785 RGLPLPNGVSQGNALNNSK 803
+G P P G++ L N K
Sbjct: 312 KGAPYPFGLNSSGQLGNGK 330
Score = 37 (18.1 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 264 VFIWGECTGDG 274
VF+WGE DG
Sbjct: 166 VFVWGE-QADG 175
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 180 (68.4 bits), Expect = 8.7e-15, Sum P(3) = 8.7e-15
Identities = 53/182 (29%), Positives = 89/182 (48%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V A G RH L+T+ GEV+S+G L + + S P L AL +V VA G
Sbjct: 43 VLQAALGVRHGVLLTEDGEVYSFGT-LPWK-SESAEICPSSPLLESALVGHHVITVATGS 100
Query: 367 HHTCAVTLSGDMYTWG---GSNCNFGLLGHGNEMS-LWLPKKLNGPLEGIHVSSVSCGPW 422
H+ AVT SG +Y WG C + E S + + P + + ++CG
Sbjct: 101 FHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRILQLACGEE 160
Query: 423 HTAVVTSAGQLFTFGDGT-FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
HT ++ + +++ +G G G++ V+ P++V+ L G ++ ACG +H+ A+V+
Sbjct: 161 HTLALSLSREIWAWGTGCQLGLIT--TTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Query: 482 VM 483
+
Sbjct: 219 CL 220
Score = 153 (58.9 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 42/134 (31%), Positives = 68/134 (50%)
Query: 299 VESAVV-LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLI-----D 352
+ESA+V V +A G H+ VT+ G V+ WGE G+ V P + +
Sbjct: 84 LESALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSE 143
Query: 353 ALKNINVELV--ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 410
++ V ++ ACGE HT A++LS +++ WG + C GL+ + P+K+ L
Sbjct: 144 TSPSLAVRILQLACGEEHTLALSLSREIWAWG-TGCQLGLIT--TTFPVTKPQKVEH-LA 199
Query: 411 GIHVSSVSCGPWHT 424
G V V+CG +H+
Sbjct: 200 GRVVLQVACGAFHS 213
Score = 118 (46.6 bits), Expect = 8.7e-15, Sum P(3) = 8.7e-15
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 593 AVLTS-RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
A+L S RTEV+TWGKG G+LGHGD R P V+ L K+V + G S + A+
Sbjct: 513 ALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLAL 568
Score = 110 (43.8 bits), Expect = 5.7e-14, Sum P(3) = 5.7e-14
Identities = 40/132 (30%), Positives = 59/132 (44%)
Query: 496 KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
+++TW RL P CV L + G S ++ALT VY+ GS
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSN 580
Query: 556 VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG-DYHVAVLTSRTEVYTWGKGANGRL-- 612
+GQLG + +P R+ ++N V +A G DY + ++ TE + G +GR
Sbjct: 581 TFGQLGHSEFPTTVP-RLSKVSSENGVWSVAAGQDYSLFLVD--TEDFQPGLYYSGRQDR 637
Query: 613 GHGDTDDRNFPS 624
GDT N PS
Sbjct: 638 AEGDTLPEN-PS 648
Score = 102 (41.0 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 27/96 (28%), Positives = 42/96 (43%)
Query: 549 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 608
V+T G GQLG +L L V + G H LT++++VY+WG
Sbjct: 522 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNT 581
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 644
G+LGH + P L + + V S+ G ++
Sbjct: 582 FGQLGHSEFPT-TVPRLSKVSSENGVWSVAAGQDYS 616
Score = 98 (39.6 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 48/203 (23%), Positives = 83/203 (40%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 461
P++L G G V + G H ++T G++++FG T I S+P +L
Sbjct: 32 PERLPG-WGGKTVLQAALGVRHGVLLTEDGEVYSFG--TLPWKSESAEICPSSPLLESAL 88
Query: 462 KGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTC 521
G + A G +H+ AV E G ++ W ++ P+
Sbjct: 89 VGHHVITVATGSFHSGAVTE------------SGVVYMWGENAAGQCAVANQQYVPEPSP 136
Query: 522 VA---ALVEPNFC----QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL--PTR 572
V+ + P+ Q++CG T+AL+ + ++ G+ QLG + P +
Sbjct: 137 VSISDSETSPSLAVRILQLACGEEHTLALSLSREIWAWGTGC--QLGLITTTFPVTKPQK 194
Query: 573 VEGKLTKNFVEEIACGDYHVAVL 595
VE L V ++ACG +H L
Sbjct: 195 VE-HLAGRVVLQVACGAFHSLAL 216
Score = 67 (28.6 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 432 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
+++T+G G G LGHGD + P V L G + G H+ A+
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLAL 568
Score = 38 (18.4 bits), Expect = 8.7e-15, Sum P(3) = 8.7e-15
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 1015 PAQGDEWVEQDETGVYIT 1032
P QG+ W D V +T
Sbjct: 1303 PGQGEVWKAWDNIAVALT 1320
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 174 (66.3 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 45/160 (28%), Positives = 80/160 (50%)
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLD--VQNIACGGRHAALVTKQGEVFSWGEELG 334
GG ++ G + + + + AV+ + V +A G H+ +VT+ G V WGE +
Sbjct: 56 GGQVYSFGELPWKQNQTSSAEPILEAVLSEQRVVFVAAGSAHSGVVTEDGGVHMWGENVH 115
Query: 335 GRLGHGVDSDVSHPKLIDAL-------KNINVELVACGEHHTCAVTLSGDMYTWGGSNCN 387
G+ G S + +P + L + + + VACG+ HT A++ +++ WG S C
Sbjct: 116 GQCGLLGLSVIPNPTPVGVLDSEATPPQTVKILEVACGDQHTLALSAKHEVWAWG-SGCQ 174
Query: 388 FGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 427
GL + + +W P+K++ L G HV V+CG H+ +
Sbjct: 175 LGL--NTSTFPVWKPQKVDH-LSGRHVLQVACGSAHSVAL 211
Score = 170 (64.9 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 52/182 (28%), Positives = 86/182 (47%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V A G RH L+ + G+V+S+GE L + + + P L L V VA G
Sbjct: 40 VLQAALGARHGVLLVEGGQVYSFGE-LPWKQNQ---TSSAEPILEAVLSEQRVVFVAAGS 95
Query: 367 HHTCAVTLSGDMYTWGGS-NCNFGLLGHG---NEMSLWLPKKLNGPLEGIHVSSVSCGPW 422
H+ VT G ++ WG + + GLLG N + + P + + + V+CG
Sbjct: 96 AHSGVVTEDGGVHMWGENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVKILEVACGDQ 155
Query: 423 HTAVVTSAGQLFTFGDGTFGVLG-HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
HT +++ +++ +G G LG + V P++VD L G ++ ACG H+ A+V
Sbjct: 156 HTLALSAKHEVWAWGSGC--QLGLNTSTFPVWKPQKVDHLSGRHVLQVACGSAHSVALVR 213
Query: 482 VM 483
+
Sbjct: 214 CL 215
Score = 149 (57.5 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 43/122 (35%), Positives = 60/122 (49%)
Query: 310 IACGG---RHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
+A GG A L + Q EV+SWG+ G+LGHG P + +L V VA G
Sbjct: 532 LASGGIPETDAHLPSLQTEVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGA 591
Query: 367 HHTCAVTLSGDMYTWGGSNCNF-GLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTA 425
HH+ A+T +++WG CN G LGH E P+ L +GI V + G HT
Sbjct: 592 HHSLALTAQSQVFSWG---CNTSGQLGH-MESPTTFPQ-LTKLSDGIRVWDIGAGLQHTL 646
Query: 426 VV 427
++
Sbjct: 647 LL 648
Score = 142 (55.0 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 56/207 (27%), Positives = 90/207 (43%)
Query: 519 PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG--------DPKANGKLP 570
P A L E V+ G + + +T G V+ G V+GQ G +P G L
Sbjct: 77 PILEAVLSEQRVVFVAAGSAHSGVVTEDGGVHMWGENVHGQCGLLGLSVIPNPTPVGVLD 136
Query: 571 TRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG-HGDTDDRNFPSLVEAL 629
+ T +E +ACGD H L+++ EV+ WG G +LG + T P V+ L
Sbjct: 137 SEATPPQTVKILE-VACGDQHTLALSAKHEVWAWGSGC--QLGLNTSTFPVWKPQKVDHL 193
Query: 630 KDKQVKSIVCGTSFTAAI--CLH--KWVSGVDQSMCSGC-RIPFNFKRKRHNC-----YN 679
+ V + CG++ + A+ CL + Q C C ++ + K + ++
Sbjct: 194 SGRHVLQVACGSAHSVALVRCLPPPQEPRKPPQDKCGQCHQLLYTMTDKEDHVIISDGHH 253
Query: 680 CGL-VYCHTCSSKKSVKASMAPNPNKP 705
C L V + K +V+ S P+P KP
Sbjct: 254 CPLGVEMDSTEIKSAVEGS--PDPGKP 278
Score = 112 (44.5 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 589 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
D H+ L +TEV++WG+G +G+LGHGD R P V++L K+V + G + A+
Sbjct: 541 DAHLPSL--QTEVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLAL 597
Score = 105 (42.0 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 28/96 (29%), Positives = 46/96 (47%)
Query: 549 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 608
V++ G GQLG +L L V ++A G +H LT++++V++WG
Sbjct: 551 VWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCNT 610
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 644
+G+LGH ++ FP L + +V I G T
Sbjct: 611 SGQLGHMESPT-TFPQLTKLSDGIRVWDIGAGLQHT 645
Score = 78 (32.5 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 25/81 (30%), Positives = 37/81 (45%)
Query: 516 RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEG 575
RL P CV +L +V+ G ++ALT V++ G GQLG ++ P
Sbjct: 570 RLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCNTSGQLGHMESPTTFPQLT-- 627
Query: 576 KLTKNF-VEEIACGDYHVAVL 595
KL+ V +I G H +L
Sbjct: 628 KLSDGIRVWDIGAGLQHTLLL 648
Score = 43 (20.2 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 283 SGSYAGVKMDSFV---PKAVESAVVLDVQNIACGGRHA-ALV 320
SG G+ +F P+ V+ V +ACG H+ ALV
Sbjct: 171 SGCQLGLNTSTFPVWKPQKVDHLSGRHVLQVACGSAHSVALV 212
Score = 40 (19.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 763 ESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNP 807
ES++ +S S +++E +R L LP +SQ + ++S P
Sbjct: 481 ESMQGKKSSSLGDIREEEAELSRRLSLPGLLSQVSPRLLRRTSRP 525
Score = 40 (19.1 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 199 AAPPKVLLPSESACGSVNSLS 219
A PP+ + E ACG ++L+
Sbjct: 139 ATPPQTVKILEVACGDQHTLA 159
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 218 (81.8 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 107/384 (27%), Positives = 154/384 (40%)
Query: 288 GVKMDSFVPKAVE--SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 345
G K D VP+ ++ S D+++IA GG H+A++T GE+F G G+LG DV
Sbjct: 11 GHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDV 70
Query: 346 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL-PKK 404
L AL V+ VACG T + +G + + G SN FG LG L P+K
Sbjct: 71 LCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCG-SNA-FGQLGVPQISGPCLIPQK 128
Query: 405 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD-SLKG 463
+ E ++ G H T +G +F +G G + R+ V + K
Sbjct: 129 IKSLKE--KAVGIAAGLRHALAATESGLVFQWGTG---MASRAKRVHQGKTLPVFWAAKE 183
Query: 464 LRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLV-PTCV 522
++ GV V + G L+ W KE LV P +
Sbjct: 184 PCEIKGNPGV--LLCQVSLSAYLTSLSTAGEGHLYVWGSNKHGQLVS--KEVFLVEPKKI 239
Query: 523 AA--LVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG--------DP--KANGKLP 570
V G + VA T TG V+T G YGQLG D K + LP
Sbjct: 240 DTQFFSHEKIGAVWSGWTHLVAQTETGKVFTWGRADYGQLGRHAAVYVADRVIKLDSFLP 299
Query: 571 TRVEGKLTKN-----FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSL 625
+ + KN + +IACG H + +WG +G G G + + P
Sbjct: 300 CCPQPEAEKNGNHTILLFQIACGSEHNLAVVGDC-CLSWGWNEHGMCGDGTEANVHVPKP 358
Query: 626 VEALK-DKQVKSIVCGTSFTAAIC 648
V+AL KQ+ I CG + A+C
Sbjct: 359 VKALGYAKQIL-IGCGAGHSLALC 381
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 81/295 (27%), Positives = 132/295 (44%)
Query: 335 GRLGHGVDSDVSHPKLID--ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG 392
G+LG G DV P+L+ + K +++ +A G H+ +T +G+++ G + G LG
Sbjct: 6 GQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKA--GQLG 63
Query: 393 HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH-TAVVTSAGQLFTFGDGTFGVLGHGDRIS 451
+ + L L L G V V+CG W T ++ AG + + G FG LG +IS
Sbjct: 64 LNHTEDV-LCFTLCTALSGFCVQEVACG-WDFTIILGRAGLVLSCGSNAFGQLGV-PQIS 120
Query: 452 --VSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXX 509
P+++ SLK + V A G+ H A E G +F W
Sbjct: 121 GPCLIPQKIKSLKE-KAVGIAAGLRHALAATE------------SGLVFQWGTGMASRAK 167
Query: 510 XXXKEARLVPTCVAAL----VEPN----FCQVSCGHSLTVALTTTG--HVYTMGSPVYGQ 559
+ + +P AA ++ N CQVS LT +L+T G H+Y GS +GQ
Sbjct: 168 RVH-QGKTLPVFWAAKEPCEIKGNPGVLLCQVSLSAYLT-SLSTAGEGHLYVWGSNKHGQ 225
Query: 560 LGDPKANGKLPTRVEGKL-TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 613
L + P +++ + + + + G H+ T +V+TWG+ G+LG
Sbjct: 226 LVSKEVFLVEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKVFTWGRADYGQLG 280
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 219 (82.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 99/370 (26%), Positives = 156/370 (42%)
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAVTL 374
H + T+ G V + G+ G+LG G + P L+ L+++ V+ A G H C ++
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV-VQAEAGGMHTVC-LSQ 84
Query: 375 SGDMYTWGGSNCNF-GLLGHGN--EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
SG +Y++G CN G LG E S +P K+ L+ V VS G HTA +T G
Sbjct: 85 SGQVYSFG---CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAALTEDG 138
Query: 432 QLFTFG-----DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGX 486
++F +G +G G+L + V ++D+ V+ A G H +
Sbjct: 139 RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDA----PVVKVASGNDHLVMLTNDG-DL 193
Query: 487 XXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCV-----AALVEPNFCQVSCGHSLTV 541
G+L LVP CV F CG T
Sbjct: 194 YTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTF 253
Query: 542 ALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEG--KLTKNFVEEIACGDYHVAVLTSR 598
A++ GHVY G Y QLG P +P + TK++V + G +H + S
Sbjct: 254 AISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVG-FSGGQHHTVCMDSE 312
Query: 599 TEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC----LHKWV 653
+ Y+ G+ GRLG G+ ++++ P+L+ L V S+ CG S A+ + W
Sbjct: 313 GKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAVSKDGRVFAWG 370
Query: 654 SGVDQSMCSG 663
G + + +G
Sbjct: 371 MGTNYQLGTG 380
Score = 202 (76.2 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 92/356 (25%), Positives = 151/356 (42%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV--A 363
DV GG H +++ G+V+S+G G LG D+ V +++ + ++V +
Sbjct: 68 DVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGR--DTSVEGSEMVPGKVELQEKVVQVS 125
Query: 364 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPW 422
G+ HT A+T G ++ WG N G++G M +P ++ L+ V V+ G
Sbjct: 126 AGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ--LDA-PVVKVASGND 182
Query: 423 HTAVVTSAGQLFTFGDGTFGVLGH--------GDRISVS---TPREVD-SLKGLR-TVR- 468
H ++T+ G L+T G G G LG G R + PR V +G R VR
Sbjct: 183 HLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRF 242
Query: 469 --AACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALV 526
A CG + T A+ G ++ + + +P + +
Sbjct: 243 QDAFCGAYFTFAI------------SREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFK 290
Query: 527 EPNFCQV--SCGHSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFV 582
V S G TV + + G Y++G YG+LG + +PT + +L V
Sbjct: 291 NSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS-RLP--VV 347
Query: 583 EEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 638
+ACG ++ V+ WG G N +LG G +D P VE + KQ+++ V
Sbjct: 348 SSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSP--VE-MTGKQLENRV 400
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 219 (82.2 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 106/415 (25%), Positives = 169/415 (40%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFV-PKAVESAVVLDVQNIACGGRHAALVTK 322
+F WG G LG G H+ +++ F P++V + I GG H+A+VT
Sbjct: 17 LFAWG-ANSYGQLGLG-HKEDVLLPQQLNDFCKPRSV--------RRITGGGGHSAVVTD 66
Query: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G++F G G+LG G D+ + +L ++ VACG T +T +G + + G
Sbjct: 67 GGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCG 126
Query: 383 GSNCNFGLLG--HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 440
SN +FG LG HG + +P+ + L V ++ G H T++G +F +G G
Sbjct: 127 -SN-SFGQLGVPHGPRRCV-VPQAIE--LHKEKVVCIAAGLRHAVAATASGIVFQWGTGL 181
Query: 441 FGV---LGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXX-XG 495
L G + + T +E + GL +A C V+ G G
Sbjct: 182 ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMC----------VLAGSDHSASLTDAG 231
Query: 496 KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQ------VSCGHSLTVALTTTGHV 549
+++ W EA +P V +E + Q + G + VA T TG +
Sbjct: 232 EVYVWGSNKHGQLA---NEAAFLP--VPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKM 286
Query: 550 YTMGSPVYGQLGDP----------KANGKLP-TRVEGKLTKN-----FVEEIACGDYHVA 593
+T G YGQLG K + LP +R + + E++CG H
Sbjct: 287 FTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNL 346
Query: 594 VLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAIC 648
+ Y+WG +G G G + P V+AL + CG + A+C
Sbjct: 347 AIIGGV-CYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLALC 400
Score = 176 (67.0 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 79/290 (27%), Positives = 124/290 (42%)
Query: 371 AVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSA 430
A + ++ WG ++ +G LG G++ + LP++LN + V ++ G H+AVVT
Sbjct: 10 AAPAAAALFAWGANS--YGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDG 67
Query: 431 GQLFTFG---DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXX 487
G LF G DG G LGH + I TP + SL G + ACG W +M+
Sbjct: 68 GDLFVCGLNKDGQLG-LGHTEDIPYFTPCK--SLFGCPIQQVACG-WDFT----IML--- 116
Query: 488 XXXXXXXGKLFTWXXXXXXXXXXXXKEAR-LVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
G++ + R +VP + E C ++ G VA T +
Sbjct: 117 ----TENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVC-IAAGLRHAVAATAS 171
Query: 547 GHVYTMGSPVY--------GQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSR 598
G V+ G+ + GQ K P+RV G L + + G H A LT
Sbjct: 172 GIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTG-LENSKAMCVLAGSDHSASLTDA 230
Query: 599 TEVYTWGKGANGRLGHGDTDDRNFPSLVEA--LKDKQVKSIVCGTSFTAA 646
EVY WG +G+L + + P +EA ++++V +I G + A
Sbjct: 231 GEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 279
Score = 155 (59.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 52/190 (27%), Positives = 83/190 (43%)
Query: 310 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA--LKNINVELVACGEH 367
+ G H+A +T GEV+ WG G+L + + + P+ I+A +N V + G
Sbjct: 217 VLAGSDHSASLTDAGEVYVWGSNKHGQLANEA-AFLPVPQKIEAHCFQNEKVTAIWSGWT 275
Query: 368 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLW--------LP--KKLNGPLEGIH--- 413
H A T +G M+TWG ++G LG E W LP + N H
Sbjct: 276 HLVAQTETGKMFTWG--RADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLT 333
Query: 414 -VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
+ VSCG H + G +++G G+ G G +V P+ V +L + CG
Sbjct: 334 GATEVSCGSEHNLAIIG-GVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCG 392
Query: 473 VWHTAAVVEV 482
H+ A+ ++
Sbjct: 393 AGHSLALCQL 402
Score = 152 (58.6 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 65/236 (27%), Positives = 96/236 (40%)
Query: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
P + +A LF +G ++G LG G + V P++++ R+VR G +AVV
Sbjct: 5 PSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVV 64
Query: 481 EVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLT 540
G LF E T +L QV+CG T
Sbjct: 65 -----------TDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFT 113
Query: 541 VALTTTGHVYTMGSPVYGQLGDPKANGK--LPTRVEGKLTKNFVEEIACGDYHVAVLTSR 598
+ LT G V + GS +GQLG P + +P +E L K V IA G H T+
Sbjct: 114 IMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIE--LHKEKVVCIAAGLRHAVAATAS 171
Query: 599 TEVYTWGKG---ANGRLGHGDTDDRNF----PSLVEALKDKQVKSIVCGTSFTAAI 647
V+ WG G RL G T F PS V L++ + ++ G+ +A++
Sbjct: 172 GIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASL 227
Score = 39 (18.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 69 RIIPGQRTPIFQRYPRPEK 87
R+ PGQ P+F P +
Sbjct: 187 RLCPGQTLPLFFTAKEPSR 205
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 170 (64.9 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 52/175 (29%), Positives = 82/175 (46%)
Query: 326 VFSWGEELGGRLGHGVDSDVSHPKLIDALKN---INVELVACGEHHTCAVTL-----SGD 377
++SWG G+LG G + P+ ++ + V +ACG HHT +T G
Sbjct: 229 LYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGP 288
Query: 378 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 437
W G LGH + S LP+ ++ E ++ SV CG +HT+VV+S G ++++G
Sbjct: 289 SICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWG 348
Query: 438 ---------DGTFGVLGHGDRISVSTPREVD--SLKGLRTVRAACGVWHTAAVVE 481
D F + GD S PR++ S + V+ +CG HT VV+
Sbjct: 349 MERGLGLCPDVNFTEVEAGDD---SVPRKISGGSSRFRDPVQVSCGAAHTVLVVD 400
Score = 139 (54.0 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 56/227 (24%), Positives = 98/227 (43%)
Query: 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK---GLRTVRAA 470
V+ V G H L+++G+ G LG GD S + P+ V++ GL A
Sbjct: 210 VALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIA 269
Query: 471 CGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNF 530
CG HTA ++ +T+ ++ +P V+ L E +
Sbjct: 270 CGAHHTA-----LLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAY 324
Query: 531 C-QVSCGHSLTVALTTTGHVYTMGSPV-YGQLGDPK------ANGKLPTRVEGKLTKNFV 582
V CG T +++ G+V++ G G D + +P ++ G ++ F
Sbjct: 325 LVSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSSR-FR 383
Query: 583 E--EIACGDYH-VAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLV 626
+ +++CG H V V+ ++++WG+G NG LG G+ D P+LV
Sbjct: 384 DPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLV 430
Score = 138 (53.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 57/202 (28%), Positives = 84/202 (41%)
Query: 305 LDVQNIACGGRHAALVTKQGEVFSWGE------ELGGRLGHGVDSDVSHPKLIDALKNIN 358
L V + G + + G ++ WG E RL + P ++D
Sbjct: 142 LKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSF-TSIPIPFP-ILD-FHGRT 198
Query: 359 VELVACGEHHTCAVTLSGD-----------MYTWGGSNCNFGLLGHGNEMSLWLPKKLN- 406
V VACG+ H A+ GD +Y+WG N + G LG G+ S P+ +
Sbjct: 199 VLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWG--NNHHGQLGLGDGESRARPQTVET 256
Query: 407 -GPLEGIHVSSVSCGPWHTAVVTSAGQL-------FTFGDGTFGVLGHGDRISVSTPREV 458
G+ V ++CG HTA++T + +TFG G G LGH S S P V
Sbjct: 257 FNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPV 316
Query: 459 DSL-KGLRTVRAACGVWHTAAV 479
L + V CG++HT+ V
Sbjct: 317 SDLPEHAYLVSVDCGLFHTSVV 338
Score = 132 (51.5 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 35/96 (36%), Positives = 50/96 (52%)
Query: 309 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKN-----INVELVA 363
++A G H +T G V+SWG + GRLG G +SD P L++ I + VA
Sbjct: 20 SLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVA 79
Query: 364 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL 399
G +H+ AV+ G ++ WG N +G LG E SL
Sbjct: 80 AGAYHSLAVSDDGSVWCWG-YNI-YGQLGFDGENSL 113
Score = 125 (49.1 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 39/126 (30%), Positives = 64/126 (50%)
Query: 549 VYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKN--FVEEIACGDYHVAVLTSRTEV--- 601
+Y+ G+ +GQLG D ++ + P VE K+ V +IACG +H A+LT R E
Sbjct: 229 LYSWGNNHHGQLGLGDGESRAR-PQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKG 287
Query: 602 ----YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ-VKSIVCGTSFTAAICL--HKWVS 654
+T+G G NG+LGH + P V L + + S+ CG T+ + + W
Sbjct: 288 PSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSW 347
Query: 655 GVDQSM 660
G+++ +
Sbjct: 348 GMERGL 353
Score = 121 (47.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 31/88 (35%), Positives = 46/88 (52%)
Query: 362 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP--LEG--IHVSSV 417
+A GE HT A+T G +Y+WG FG LG G E +P + P EG I + V
Sbjct: 21 LAAGEAHTIALTGDGCVYSWGRGM--FGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGV 78
Query: 418 SCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
+ G +H+ V+ G ++ +G +G LG
Sbjct: 79 AAGAYHSLAVSDDGSVWCWGYNIYGQLG 106
Score = 119 (46.9 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 38/138 (27%), Positives = 57/138 (41%)
Query: 531 CQVSCGHSLTVALTTTGHVYTMGS-PVYGQLGDPKAN-GKLPTRVEG-KLTKNFVEEIAC 587
C V G +++A+ G ++ G+ P DP+ + +P V ++AC
Sbjct: 145 CTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVAC 204
Query: 588 GDYHVAVLTSRTEV-----------YTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ--- 633
GD HV L ++ Y+WG +G+LG GD + R P VE K
Sbjct: 205 GDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLT 264
Query: 634 VKSIVCGTSFTAAICLHK 651
V I CG TA + K
Sbjct: 265 VYDIACGAHHTALLTYRK 282
Score = 106 (42.4 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 56/245 (22%), Positives = 91/245 (37%)
Query: 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVST---PREVDSLKGLRTVR 468
+ V +V G + + + G L+ +G+ R+S ++ P + G ++
Sbjct: 142 LKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLK 201
Query: 469 AACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEP 528
ACG H A+V L++W E+R P V +
Sbjct: 202 VACGDEHVVALVGPG-DIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQK 260
Query: 529 N---FCQVSCGHSLTVALTTTGHV-------YTMGSPVYGQLGD-PKANGKLPTRVEGKL 577
+ ++CG T LT +T G GQLG + LP V
Sbjct: 261 SGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLP 320
Query: 578 TKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 637
++ + CG +H +V++S V++WG G G D NF VEA D + I
Sbjct: 321 EHAYLVSVDCGLFHTSVVSSEGYVWSWGM----ERGLGLCPDVNFTE-VEAGDDSVPRKI 375
Query: 638 VCGTS 642
G+S
Sbjct: 376 SGGSS 380
Score = 85 (35.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR------ISVSTPREVDSLKGLRTV 467
+ S++ G HT +T G ++++G G FG LG G + V P + + + +R V
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDR-IRIV 76
Query: 468 RAACGVWHTAAV 479
A G +H+ AV
Sbjct: 77 GVAAGAYHSLAV 88
Score = 82 (33.9 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 29/93 (31%), Positives = 45/93 (48%)
Query: 271 TGDGIL---GGGIH-RSGSYAGVKMDSFVPKAVE-----SAVVLDVQNIACGGRHAALVT 321
TGDG + G G+ R G+ G + D VP VE + + +A G H+ V+
Sbjct: 32 TGDGCVYSWGRGMFGRLGT--GKESDELVPVLVEFPNQAEGDRIRIVGVAAGAYHSLAVS 89
Query: 322 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDAL 354
G V+ WG + G+LG ++ ++ P LI L
Sbjct: 90 DDGSVWCWGYNIYGQLGFDGENSLA-PCLIKNL 121
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 234 (87.4 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 100/389 (25%), Positives = 164/389 (42%)
Query: 272 GDGILGGGIHRS-GSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWG 330
GDG+LG H + SY+ K+ F ++ L V +IA GG+H+ +T G+V+SWG
Sbjct: 213 GDGLLGKLGHGNLESYSSPKLVEFF----QTKPSLRVVSIANGGKHSLALTICGKVYSWG 268
Query: 331 EELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGL 390
+LG G S S+ L L N N+ ++ + T +N N
Sbjct: 269 GNDSCQLGLGNGSSSSYYSL-PQLINFNISYNNNNNNNN-------NNSTNNNNNNN--- 317
Query: 391 LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR- 449
G + L + + I + +SCG +AV+T G LFTFG G G LG G++
Sbjct: 318 -NDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQS 376
Query: 450 -ISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXX 508
+ STP+ V SL+G + + G H+ + + G+L
Sbjct: 377 LLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGL-VFSFGRNDQGQL---GIGCFSNQ 432
Query: 509 XXXXKEARLVPTCVAALVEP-NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPK 564
K+ + T +P N +VS G ++A++ Y G YG LG D +
Sbjct: 433 QTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQ 492
Query: 565 ANGKLPTRVEGK--LTKN--FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDR 620
+ LP + + N F++ ++ G H ++ +Y+WG A RLG +++
Sbjct: 493 GDRNLPVLINSNSVVVDNVKFID-VSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQ 551
Query: 621 NFPS--LVEALKDKQVKSIVCGTSFTAAI 647
P + + KD + CG T +
Sbjct: 552 LTPKKCFINS-KDSKPLLFTCGEIITIIV 579
Score = 180 (68.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 47/139 (33%), Positives = 78/139 (56%)
Query: 275 ILGGGIHRSGSYAGVKMDS--FVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEE 332
I G GI +Y M S F + +VL I+ G H++ +T QG ++++G+
Sbjct: 163 IWGNGIR---NYKNCNMSSIGFSEMYNQQKIVL----ISTGAIHSSFITDQGNLYTFGDG 215
Query: 333 LGGRLGHGVDSDVSHPKLIDALK---NINVELVACGEHHTCAVTLSGDMYTWGGSN-CNF 388
L G+LGHG S PKL++ + ++ V +A G H+ A+T+ G +Y+WGG++ C
Sbjct: 216 LLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQL 275
Query: 389 GLLGHGNEMSLW-LPKKLN 406
GL G+G+ S + LP+ +N
Sbjct: 276 GL-GNGSSSSYYSLPQLIN 293
Score = 46 (21.3 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 857 IVVDDAKRTSEEVIKLRAQVEELTRKSQLQEIEL 890
I+V+ KR E +IK Q+ T+ Q E+ L
Sbjct: 577 IIVE--KRFKEPIIKTELQLPSSTQSQQQTELSL 608
Score = 38 (18.4 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 9/40 (22%), Positives = 14/40 (35%)
Query: 769 ESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPV 808
E ++ N N N + N NN+ NP+
Sbjct: 1592 EENNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEENPL 1631
Score = 37 (18.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 571 TRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 602
T G + KNF E + + ++ T+ Y
Sbjct: 918 TNSSGIINKNFGESLRLSMEEIQLIVLETQKY 949
>TAIR|locus:2149897 [details] [associations]
symbol:BRXL4 "AT5G20540" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0010089 "xylem development" evidence=RCA]
[GO:0044036 "cell wall macromolecule metabolic process"
evidence=RCA] GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AF296833 HOGENOM:HOG000240563 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 EMBL:AK117133 IPI:IPI00532495 RefSeq:NP_197554.2
UniGene:At.49043 PaxDb:Q8GZ92 PRIDE:Q8GZ92
EnsemblPlants:AT5G20540.1 GeneID:832176 KEGG:ath:AT5G20540
TAIR:At5g20540 eggNOG:NOG313093 InParanoid:Q8GZ92 OMA:ADRSEEM
PhylomeDB:Q8GZ92 ProtClustDB:CLSN2918629 Genevestigator:Q8GZ92
Uniprot:Q8GZ92
Length = 384
Score = 204 (76.9 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 40/85 (47%), Positives = 58/85 (68%)
Query: 993 SQTEASHCEATTKNKNRT--MKAEPAQG--DEWVEQDETGVYITLVALPGGLKDLKRVRF 1048
S +AS +++++ +R+ M A +EWVEQDE GVYIT+ LPGG ++L+RVRF
Sbjct: 299 SSIDASIRSSSSRDADRSEEMSVSNASDVDNEWVEQDEPGVYITIKVLPGGKRELRRVRF 358
Query: 1049 SRKKFSEKQAEQWWAANRARVYQQY 1073
SR++F E A WW NRAR+++QY
Sbjct: 359 SRERFGEMHARLWWEENRARIHEQY 383
Score = 186 (70.5 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 39/91 (42%), Positives = 57/91 (62%)
Query: 993 SQTEASHCEATTKNK-NRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRK 1051
S EA+ A+ +N+ + + E + EWV Q E GV IT V+LPGG DLKR+RFSR
Sbjct: 123 SSGEATPKSASGRNRVDPIVFVEEKEPKEWVAQVEPGVLITFVSLPGGGNDLKRIRFSRD 182
Query: 1052 KFSEKQAEQWWAANRARVYQQYNVSMVDKSS 1082
F++ QA++WWA N +V + YNV + + +
Sbjct: 183 MFNKLQAQRWWADNYDKVMELYNVQKLSRQA 213
Score = 54 (24.1 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 23/83 (27%), Positives = 36/83 (43%)
Query: 270 CT---GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEV 326
CT G G G I + S + VK D + + ++ N + A T+Q +
Sbjct: 51 CTAAQGQGQGQGPIKNNPSSSSVKSDFESDQRFK--MLYGRSNSSITATAAVAATQQQQP 108
Query: 327 FSWGEELGGRLGHGVDSDVSHPK 349
WG+E+ RL G+ S + PK
Sbjct: 109 RVWGKEMEARL-KGISSGEATPK 130
Score = 51 (23.0 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 919 KSLTAQLKDMAEMLPVGAVRN 939
KSLT+QLKDMA + GA R+
Sbjct: 28 KSLTSQLKDMA-LKASGAYRH 47
Score = 43 (20.2 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 616 DTDDRNFPSLVEALKDKQVKS 636
D D +N SL LKD +K+
Sbjct: 21 DPDSKNAKSLTSQLKDMALKA 41
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 216 (81.1 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 77/297 (25%), Positives = 124/297 (41%)
Query: 328 SWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVA--CGEHHTCAVTLSGDMYTWGGSN 385
+W + +G R G ++ ++ P + L +N+ VA C H A+ + G YTWG +
Sbjct: 29 AW-DIIGKRKG-AMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNE 86
Query: 386 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
G LGHG+ + P ++G L + + G HT VV+ GQ FG +G LG
Sbjct: 87 K--GQLGHGDMIQRDRPTVVSG-LSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLG 143
Query: 446 HGDRISVSTPREVDS-----LKGLRTVRAACG----VWHTAAVVEVMVGXXXXXXXXXGK 496
G + EV+S + ACG VW ++ ++ G
Sbjct: 144 LGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGH 203
Query: 497 LFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPV 556
EA+ P +A+L +V+CG + TVA+ G+VYT G
Sbjct: 204 GTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGG 263
Query: 557 YGQLGDPKANGK-LPTRVEGKLTKNFVEE---IACGDYHVAVLTSRTEVYTWGKGAN 609
YG+LG + + P R++ N + ++ G + A ++Y WGK N
Sbjct: 264 YGRLGHREQKDEWAPRRIDVFQRNNVLPPNAILSAGSANSACTAGGGQLYMWGKIKN 320
Score = 211 (79.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 74/258 (28%), Positives = 104/258 (40%)
Query: 396 EMSLWLPKKLNGPLEGIHVSSVS--CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 453
E +L P +L PL G+++ V+ C +H + G+ +T+G G LGHGD I
Sbjct: 41 EGNLVSPTRLR-PLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRD 99
Query: 454 TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXK 513
P V L + V+AA G HT V+V +
Sbjct: 100 RPTVVSGLSKHKIVKAAAGRNHT-----VVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSV 154
Query: 514 EARLVPT-CVAALVEPNFCQVSCGHSLTVALTTT--GHVYTMGSPVYGQLG---DPKANG 567
E P CV V V+CG TV L++T + T G P YGQLG D + N
Sbjct: 155 EVESTPLPCV---VSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNM 211
Query: 568 K-----LPTRVEGK------LTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD 616
K L + + L + ++ACG H + VYTWG G GRLGH +
Sbjct: 212 KDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHRE 271
Query: 617 TDDRNFPSLVEALKDKQV 634
D P ++ + V
Sbjct: 272 QKDEWAPRRIDVFQRNNV 289
Score = 207 (77.9 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 55/192 (28%), Positives = 90/192 (46%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
PKA+ S + +ACG H V K G V++WG GRLGH D P+ ID +
Sbjct: 226 PKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQ 285
Query: 356 NINV----ELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 411
NV +++ G ++ G +Y WG N G++ W+ K L G
Sbjct: 286 RNNVLPPNAILSAGSANSACTAGGGQLYMWGKIKNN------GDD---WMYPKPMMDLSG 336
Query: 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD--RISVSTPREVDSLKGLRTVRA 469
++ + G H V + + ++G +G LG+G + S + P++VD L+G+ +
Sbjct: 337 WNLRWMDSGSMHHFVGADSSCI-SWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGV 395
Query: 470 ACGVWHTAAVVE 481
ACG H+ +V+
Sbjct: 396 ACGFCHSMVIVD 407
Score = 170 (64.9 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 59/192 (30%), Positives = 90/192 (46%)
Query: 273 DG-ILGGGIHRSGSYA-GVKMDSFVPKAVESA----VVLD-VQNIACGGRHAALV--TKQ 323
DG LG G ++ G G + FV VES VV D V N+ACG + T+
Sbjct: 128 DGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEG 187
Query: 324 GEVFSWGEELGGRLGHGVDSDVS--------------HPKLIDALKNINVELVACGEHHT 369
+ + G G+LGHG D++ + PK I +L + VACG +HT
Sbjct: 188 ASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHT 247
Query: 370 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHV----SSVSCGPWHTA 425
AV +G +YTWG +G LGH + W P++++ + +V + +S G ++A
Sbjct: 248 VAVDKNGYVYTWGFGG--YGRLGHREQKDEWAPRRID-VFQRNNVLPPNAILSAGSANSA 304
Query: 426 VVTSAGQLFTFG 437
GQL+ +G
Sbjct: 305 CTAGGGQLYMWG 316
Score = 147 (56.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 44/173 (25%), Positives = 78/173 (45%)
Query: 284 GSYAGVKMDSFV-PKAVESAVVLDVQNIA--CGGRHAALVTKQGEVFSWGEELGGRLGHG 340
G G + V P + V ++++ +A C H + +G ++WG G+LGHG
Sbjct: 34 GKRKGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHG 93
Query: 341 VDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLW 400
P ++ L + A G +HT V+ G +G + +G LG G+ + +
Sbjct: 94 DMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNK--YGQLGLGSAKNGF 151
Query: 401 LPKKLNG-PLEGI---HVSSVSCGPWHTAVVTSA--GQLFTFGDGTFGVLGHG 447
+ ++ PL + V++V+CG T ++S + T G +G LGHG
Sbjct: 152 VSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHG 204
Score = 57 (25.1 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 553 GSPVYGQLG-DPKA--NGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEV 601
G YG+LG P + P +V+ L V +ACG H V+ RT++
Sbjct: 361 GHAQYGELGYGPNGQKSSAAPKKVD-MLEGMHVMGVACGFCHSMVIVDRTDI 411
Score = 40 (19.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 1052 KFSEKQAEQWWAANRARVYQQYNV 1075
+ ++ + WA R V+Q+ NV
Sbjct: 266 RLGHREQKDEWAPRRIDVFQRNNV 289
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 173 (66.0 bits), Expect = 7.7e-14, Sum P(3) = 7.7e-14
Identities = 55/189 (29%), Positives = 95/189 (50%)
Query: 307 VQNIACGGRHAALVTK-----QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVEL 361
V + A G +H L+T+ GEV+S+G L R ++ S+P L AL V
Sbjct: 43 VLHAALGVKHGVLLTEVFKPSDGEVYSFGT-LPWR-SEPAETCPSNPILESALVGQYVVT 100
Query: 362 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN------GPLEGIHVS 415
VA G HT AVT SG +Y WG ++ G N+ + P ++ PL + +
Sbjct: 101 VATGSFHTGAVTDSGVVYMWGENSA--GQCAVANQPYVPEPNPVSISDSETSPLLAVRIL 158
Query: 416 SVSCGPWHTAVVTSAGQLFTFGDGT-FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVW 474
++CG HT ++ + +++ +G G G++ V+ P++V+ L G ++ ACG +
Sbjct: 159 QLACGEEHTLALSLSREIWAWGTGCQLGLIT--TTFPVTKPQKVEHLAGRVVLQVACGAF 216
Query: 475 HTAAVVEVM 483
H+ A+V+ +
Sbjct: 217 HSLALVQCL 225
Score = 116 (45.9 bits), Expect = 7.7e-14, Sum P(3) = 7.7e-14
Identities = 29/96 (30%), Positives = 43/96 (44%)
Query: 549 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 608
V+T G GQLG +L L V + G YH LT++++VY+WG
Sbjct: 532 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNT 591
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 644
G+LGH D P L + + V S+ G ++
Sbjct: 592 FGQLGHSDFPT-TVPRLAKVNSENGVWSVAAGQDYS 626
Score = 114 (45.2 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 29/67 (43%), Positives = 38/67 (56%)
Query: 593 AVLTS-RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG----TSFTAAI 647
A+L S RTEV+TWGKG G+LGHGD R P V+ L K+V + G + TA
Sbjct: 523 ALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKS 582
Query: 648 CLHKWVS 654
++ W S
Sbjct: 583 QVYSWGS 589
Score = 101 (40.6 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 37/129 (28%), Positives = 56/129 (43%)
Query: 496 KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
+++TW RL P CV L + G ++ALT VY+ GS
Sbjct: 531 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 590
Query: 556 VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG-DYHVAVLTSRTEVYTWGKGANGRLGH 614
+GQLG +P R+ ++N V +A G DY + ++ TE + G +GRL
Sbjct: 591 TFGQLGHSDFPTTVP-RLAKVNSENGVWSVAAGQDYSLFLVD--TEDFQPGLCYSGRLD- 646
Query: 615 GDTDDRNFP 623
T+ N P
Sbjct: 647 -PTEGDNLP 654
Score = 40 (19.1 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 12/45 (26%), Positives = 19/45 (42%)
Query: 922 TAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLT 966
T + + + L +VR S+ P P+ + AI SP T
Sbjct: 346 TQAVNEYVQKLSDHSVRESSENGEKPVPSQPLVEEAIPNLHSPPT 390
Score = 38 (18.4 bits), Expect = 7.7e-14, Sum P(3) = 7.7e-14
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 1015 PAQGDEWVEQDETGVYIT 1032
P QG+ W D V +T
Sbjct: 1313 PGQGEVWKAWDNIAVALT 1330
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 212 (79.7 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 66/237 (27%), Positives = 112/237 (47%)
Query: 264 VFIWGECTGDGILGGGIH---RSGSYAGVKMDSFVPKAVE-----SAVVLDVQNIACGGR 315
++ WG LGG +S S + D + K ++ + D + I G
Sbjct: 197 IYGWGR-NHKNQLGGRERVKDKSSSPSSPSEDEYYSKPIKVLKETDPIFKDFKKICSGSD 255
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVDSD----VSHPKLIDA--LKNINVELV--ACGEH 367
H L+ G ++SWG G LGHGV S+ + PK I L N +V ACG +
Sbjct: 256 HNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGY 315
Query: 368 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL--WLPKKLNGPLE---GIHVSSVSCGPW 422
H+ +T ++YT+G FG LGHG +L ++PK++ + G + S+ G
Sbjct: 316 HSMFLTNDNEIYTFGYGE--FGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGDH 373
Query: 423 -HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 478
++ +T+ G ++++G G LGHG + +P+++ SL ++ + + G HT A
Sbjct: 374 ANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQSLSNIKKITS--GFKHTLA 428
Score = 207 (77.9 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 57/189 (30%), Positives = 94/189 (49%)
Query: 264 VFIWGECTGDGILGGGI---HRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALV 320
++ WG G LG G+ + Y K+ +F ES +V +IACGG H+ +
Sbjct: 266 LYSWGNGYF-GALGHGVGSNDKENIYTPKKITTFTLNNNESRIV----DIACGGYHSMFL 320
Query: 321 TKQGEVFSWGEELGGRLGHGVDSDVSH--PKLI----DALKNINVELVACGEH-HTCAVT 373
T E++++G G+LGHG + ++H PK I D ++ + G+H ++ +T
Sbjct: 321 TNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYIT 380
Query: 374 LSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQL 433
G +Y+WG ++ G LGHG + + PKK+ L I ++ G HT + +
Sbjct: 381 TDGSVYSWGWNDG--GSLGHGTNENHYSPKKIQS-LSNI--KKITSGFKHTLAQSINNDI 435
Query: 434 FTFGDGTFG 442
+ FGD TFG
Sbjct: 436 YVFGDNTFG 444
Score = 172 (65.6 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 52/209 (24%), Positives = 89/209 (42%)
Query: 362 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG---NEM-SLWLPKKLNG-PLEG--IHV 414
+ G H + G +Y+WG N FG LGHG N+ +++ PKK+ L +
Sbjct: 250 ICSGSDHNLLLGNDGSLYSWG--NGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRI 307
Query: 415 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG--DRISVSTPREVDSLKGLRTVRAACG 472
++CG +H+ +T+ +++TFG G FG LGHG D ++ P+ + S T A G
Sbjct: 308 VDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKS-----TGDNAAG 362
Query: 473 VWHTAAVVEVMVGXXXXXX--XXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNF 530
+ + G G +++W E P + +L N
Sbjct: 363 ----NKIKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQSL--SNI 416
Query: 531 CQVSCGHSLTVALTTTGHVYTMGSPVYGQ 559
+++ G T+A + +Y G +GQ
Sbjct: 417 KKITSGFKHTLAQSINNDIYVFGDNTFGQ 445
Score = 150 (57.9 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 40/160 (25%), Positives = 71/160 (44%)
Query: 527 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG---DPKANGKLPTRVEG---KLTKN 580
E ++CG ++ LT +YT G +GQLG + N +P R++ N
Sbjct: 304 ESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGN 363
Query: 581 FVEEIACGDY-HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 639
++ I GD+ + +T+ VY+WG G LGHG ++ P +++L + +K I
Sbjct: 364 KIKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQSLSN--IKKITS 421
Query: 640 GTSFTAAICLHKWVSGVDQSMCSGCRIPFNFKRKRHNCYN 679
G T A ++ + + + FN+ +N N
Sbjct: 422 GFKHTLAQSINNDIYVFGDNTFGQTALKFNYNSNNNNDKN 461
Score = 146 (56.5 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 40/126 (31%), Positives = 63/126 (50%)
Query: 529 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-----DPKANGKLPTRVEG-KLTKNF- 581
+F ++ G + L G +Y+ G+ +G LG + K N P ++ L N
Sbjct: 246 DFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNES 305
Query: 582 -VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRN--FPSLVEALKDK----QV 634
+ +IACG YH LT+ E+YT+G G G+LGHG+ D N P +++ D ++
Sbjct: 306 RIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKI 365
Query: 635 KSIVCG 640
KSI G
Sbjct: 366 KSIFAG 371
Score = 111 (44.1 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 49/189 (25%), Positives = 81/189 (42%)
Query: 284 GSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ-GEVFSWGEELGGRLGHG-- 340
G Y+ + + VP ++ + N++ GG L TK +++S G+ G LG G
Sbjct: 97 GLYSNLVTE--VPNKIKINNDKKISNVSLGGNFIILQTKDDNQLYSIGKSKYGVLGIGRS 154
Query: 341 VDSDV----SHPKLIDALK-NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN 395
+D D ++ K+ K N N+ + G H+ VT +Y WG ++ N LG G
Sbjct: 155 IDDDDDNNNNNEKVYKIEKFNDNIISIVSGYEHSLVVTKDDGIYGWGRNHKN--QLG-GR 211
Query: 396 EMSLWLPKKLNGPLEGIHVSS-----------------VSCGPWHTAVVTSAGQLFTFGD 438
E + P E + S + G H ++ + G L+++G+
Sbjct: 212 ERVKDKSSSPSSPSEDEYYSKPIKVLKETDPIFKDFKKICSGSDHNLLLGNDGSLYSWGN 271
Query: 439 GTFGVLGHG 447
G FG LGHG
Sbjct: 272 GYFGALGHG 280
Score = 51 (23.0 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 26/108 (24%), Positives = 46/108 (42%)
Query: 345 VSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLWLPK 403
+S +L L + + + +H+ + + + Y WG SN + N++ + K
Sbjct: 60 ISETELPIKLNGLKAKDIFANAYHSGIINENDEFYHWGLYSNL---VTEVPNKIKINNDK 116
Query: 404 KLNGPLEGIHVSSVSCGPWHTAVVTSA-GQLFTFGDGTFGVLGHGDRI 450
K +S+VS G + T QL++ G +GVLG G I
Sbjct: 117 K---------ISNVSLGGNFIILQTKDDNQLYSIGKSKYGVLGIGRSI 155
Score = 40 (19.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 10/61 (16%), Positives = 29/61 (47%)
Query: 401 LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS 460
LP KLNG + + +H+ ++ + + +G + V ++I ++ +++ +
Sbjct: 65 LPIKLNG----LKAKDIFANAYHSGIINENDEFYHWGLYSNLVTEVPNKIKINNDKKISN 120
Query: 461 L 461
+
Sbjct: 121 V 121
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 169 (64.5 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 53/184 (28%), Positives = 90/184 (48%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V A G +H L+T+ GEV+S+G L R + S P L +AL V VA G
Sbjct: 43 VLQAALGVKHGVLLTEDGEVYSFGT-LPWR-SEPAEICPSCPILENALIGQFVVTVASGS 100
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLN------GPLEGIHVSSVSCG 420
H AVT SG Y WG ++ G N+ + P ++ L + + ++CG
Sbjct: 101 FHNGAVTESGVAYMWGENSA--GQCAVANQQYVPEPNPVSISDSETSSLLAVRILQLACG 158
Query: 421 PWHTAVVTSAGQLFTFGDGT-FGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
HT ++ + +++ +G G G++ V+ P++V+ L G ++ ACG +H+ A+
Sbjct: 159 EEHTLALSISREIWAWGTGCQLGLIT--TTFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
Query: 480 VEVM 483
V+ +
Sbjct: 217 VQCL 220
Score = 143 (55.4 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 38/134 (28%), Positives = 65/134 (48%)
Query: 299 VESAVVLD-VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID----- 352
+E+A++ V +A G H VT+ G + WGE G+ V P +
Sbjct: 84 LENALIGQFVVTVASGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSE 143
Query: 353 --ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 410
+L + + +ACGE HT A+++S +++ WG + C GL+ + P+K+ L
Sbjct: 144 TSSLLAVRILQLACGEEHTLALSISREIWAWG-TGCQLGLIT--TTFPVTKPQKVEH-LA 199
Query: 411 GIHVSSVSCGPWHT 424
G V V+CG +H+
Sbjct: 200 GRVVLQVACGAFHS 213
Score = 113 (44.8 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 29/67 (43%), Positives = 38/67 (56%)
Query: 593 AVLTS-RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG----TSFTAAI 647
A+L S RTEV+TWGKG G+LGHGD R P V+ L K+V + G + TA
Sbjct: 518 ALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKS 577
Query: 648 CLHKWVS 654
++ W S
Sbjct: 578 QVYSWGS 584
Score = 112 (44.5 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 29/96 (30%), Positives = 43/96 (44%)
Query: 549 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 608
V+T G GQLG +L L V + G YH LT++++VY+WG
Sbjct: 527 VWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSNT 586
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 644
G+LGH D P L + + V S+ G ++
Sbjct: 587 FGQLGHYDFPT-TVPRLAKVSSENGVWSVAAGQDYS 621
Score = 94 (38.1 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 36/129 (27%), Positives = 55/129 (42%)
Query: 496 KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
+++TW RL P CV L + G ++ALT VY+ GS
Sbjct: 526 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSN 585
Query: 556 VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG-DYHVAVLTSRTEVYTWGKGANGRLGH 614
+GQLG +P R+ ++N V +A G DY + ++ TE + G +GR
Sbjct: 586 TFGQLGHYDFPTTVP-RLAKVSSENGVWSVAAGQDYSLFLVD--TEDFQPGLYYSGRQDP 642
Query: 615 GDTDDRNFP 623
+ D N P
Sbjct: 643 AEGD--NLP 649
Score = 92 (37.4 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 47/196 (23%), Positives = 78/196 (39%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSL 461
P++L G G V + G H ++T G++++FG T I S P ++L
Sbjct: 32 PERLPG-WGGKTVLQAALGVKHGVLLTEDGEVYSFG--TLPWRSEPAEICPSCPILENAL 88
Query: 462 KGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTC 521
G V A G +H AV E V G+ + +
Sbjct: 89 IGQFVVTVASGSFHNGAVTESGVAYMWGENSA-GQC----AVANQQYVPEPNPVSISDSE 143
Query: 522 VAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL--PTRVEGKLTK 579
++L+ Q++CG T+AL+ + ++ G+ QLG + P +VE L
Sbjct: 144 TSSLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTKPQKVE-HLAG 200
Query: 580 NFVEEIACGDYHVAVL 595
V ++ACG +H L
Sbjct: 201 RVVLQVACGAFHSLAL 216
Score = 70 (29.7 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 432 QLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
+++T+G G G LGHGD + P V L G + G +H+ A+
Sbjct: 526 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLAL 573
Score = 38 (18.4 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 1015 PAQGDEWVEQDETGVYIT 1032
P QG+ W D V +T
Sbjct: 1308 PGQGEVWKAWDNIAVALT 1325
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 206 (77.6 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 98/350 (28%), Positives = 152/350 (43%)
Query: 266 IWGE-CTGDGILGGGIHRSGS-----YAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 319
+WG D LG HRS Y V S V ++ V ++CG H+ +
Sbjct: 131 VWGMGLNKDSQLG--FHRSRKDKTRGYEYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLV 188
Query: 320 VTKQGEVFSWGEELGGRLGHGV-DSDV-SHPKLIDALKNINVELV--ACGEHHTCAVTLS 375
+T + VFS G G+ G V ++++ S + +++ + ++V ACG+ H+ +T
Sbjct: 189 LTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDK 248
Query: 376 GDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 434
G++Y+ G G++ GL GH N S P KL G L G++V V+ V++ G LF
Sbjct: 249 GEVYSCGWGADGQTGL-GHYNITSS--PTKLGGDLAGVNVIQVATYGDCCLAVSADGGLF 305
Query: 435 TFGDGTFGVLGH-GDRISVSTPREVDSLKGLRTVR-AACGVWHTAAVVEVMVGXXXXXXX 492
+G+ + L D V+ PR + G+ VR AACG G
Sbjct: 306 GWGNSEYLQLASVTDSTQVNVPRCLH-FSGVGKVRQAACG------------GTGCAVLN 352
Query: 493 XXGKLFTWXXXXXXXXXXXXKEA--RLVPTCVAALVEPN-FCQVS---CGHSLTVALTTT 546
G +F W + A ++P + L E N QVS CG S ALT
Sbjct: 353 GEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNK 412
Query: 547 GHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVL 595
G ++ G + G LG + + P RV + V+ +ACG H+ L
Sbjct: 413 GELFVWGKNIRGCLGIGRLEDQYFPWRVT--MPGEPVD-VACGVDHMVTL 459
Score = 190 (71.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 77/309 (24%), Positives = 124/309 (40%)
Query: 343 SDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWL 401
S VS P +D + V V+CG H+ +T +++ G N ++G G E ++
Sbjct: 162 SPVSLP--LDRPQETRVLQVSCGRAHSLVLTDREGVFSMG--NNSYGQCGRKVVENEIYS 217
Query: 402 PKKLNGPLEGI--HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVD 459
++ V V+CG H+ +T G++++ G G G G G S+P ++
Sbjct: 218 ESHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLG 277
Query: 460 S-LKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARL- 517
L G+ ++ A G G LF W ++
Sbjct: 278 GDLAGVNVIQVAT------------YGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVN 325
Query: 518 VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ---LGDPKANGKLPTRVE 574
VP C+ Q +CG + L GHV+ G + G+ L + +P +
Sbjct: 326 VPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLF 385
Query: 575 GKLTKN---FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKD 631
G N V I CG H A LT++ E++ WGK G LG G +D+ FP V +
Sbjct: 386 GLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRV-TMPG 444
Query: 632 KQVKSIVCG 640
+ V + CG
Sbjct: 445 EPV-DVACG 452
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 71/249 (28%), Positives = 105/249 (42%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP-KLIDALKNINVELVACG 365
V +ACG H+ +T +GEV+S G G+ G G + S P KL L +NV VA
Sbjct: 232 VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATY 291
Query: 366 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCGPWHT 424
AV+ G ++ WG S L + + +P+ L+ G+ V +CG
Sbjct: 292 GDCCLAVSADGGLFGWGNSEY-LQLASVTDSTQVNVPRCLH--FSGVGKVRQAACGGTGC 348
Query: 425 AVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV--DSLKGL-------RTVRAACGVWH 475
AV+ G +F +G +G+LG G + S E+ +L GL + R CG+ H
Sbjct: 349 AVLNGEGHVFVWG---YGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSH 405
Query: 476 TAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSC 535
AA+ G+LF W E + P V EP V+C
Sbjct: 406 FAALTN------------KGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEP--VDVAC 451
Query: 536 G--HSLTVA 542
G H +T+A
Sbjct: 452 GVDHMVTLA 460
Score = 150 (57.9 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 56/181 (30%), Positives = 84/181 (46%)
Query: 264 VFIWGEC----TGDG-ILGGGIHRSGSYAGVKMDSF---VPKAVESAVVLDVQNIACGGR 315
V +G+C + DG + G G A V DS VP+ + + V V+ ACGG
Sbjct: 288 VATYGDCCLAVSADGGLFGWGNSEYLQLASVT-DSTQVNVPRCLHFSGVGKVRQAACGGT 346
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVEL----VACGEHHT 369
A++ +G VF WG + G+ + V+S V P + L N E+ + CG H
Sbjct: 347 GCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHF 406
Query: 370 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 429
A+T G+++ WG N G LG G + P ++ P E + V+CG H +VT
Sbjct: 407 AALTNKGELFVWG-KNIR-GCLGIGRLEDQYFPWRVTMPGEPV---DVACGVDH--MVTL 459
Query: 430 A 430
A
Sbjct: 460 A 460
Score = 46 (21.3 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 22/72 (30%), Positives = 30/72 (41%)
Query: 268 GECTGDGILGGGIHRSGSYAGVKMDSFVPKAVES-AVVLDVQNIACGGRHAALVTKQGEV 326
G G + G G+ R G + + +A E+ A V VQ + G AA + V
Sbjct: 9 GARLGRRLSGPGLGR-GHWTAARRSRSRREAAEAEAEVPVVQYV---GERAA---RADRV 61
Query: 327 FSWGEELGGRLG 338
F WG G LG
Sbjct: 62 FVWGFSFSGALG 73
>TAIR|locus:2058694 [details] [associations]
symbol:BRXL1 "AT2G35600" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
EMBL:AC006068 EMBL:AC005314 EMBL:AY087525 IPI:IPI00518375
PIR:F84770 RefSeq:NP_565809.1 UniGene:At.37646 PaxDb:O82281
PRIDE:O82281 EnsemblPlants:AT2G35600.1 GeneID:818126
KEGG:ath:AT2G35600 TAIR:At2g35600 eggNOG:NOG286599
HOGENOM:HOG000240563 InParanoid:O82281 OMA:FTCINCT PhylomeDB:O82281
ProtClustDB:CLSN2688709 Genevestigator:O82281 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 Uniprot:O82281
Length = 331
Score = 201 (75.8 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 55/180 (30%), Positives = 87/180 (48%)
Query: 915 KDVIKSLTAQLKDMAEMLPVGAVRNSNSFHSSPT------PAWDVSSAAIEQPSSPLTFQ 968
K+ +KSLT Q+KDMA G+ + S S + P +D +S ++ P P
Sbjct: 31 KEAVKSLTTQIKDMASKFS-GSHKQSKPTPGSSSSNLRKFPDFDTASESVPYPY-PGGST 88
Query: 969 GAIPXXXXXXXXXXXXDFGDNRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETG 1028
+ P D+R S + ++ + + E + EW+ Q E G
Sbjct: 89 SSTPAWDLPRSSYHQSGRPDSRFTSMYGGERESISAQSCDVVL--EDDEPKEWMAQVEPG 146
Query: 1029 VYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSI-GR 1087
V+IT V+LP G DLKR+RFSR+ F + QA++WW N R+ + YNV ++ ++ GR
Sbjct: 147 VHITFVSLPSGGNDLKRIRFSREVFDKWQAQRWWGENYDRIVELYNVQRFNRQALQTPGR 206
Score = 186 (70.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 36/79 (45%), Positives = 53/79 (67%)
Query: 996 EASHCEATTKNKNRTMK-AEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFS 1054
+A+ +++++ +M A QG EWVE+DE GVYIT+ LP G ++L+RVRFSR++F
Sbjct: 253 DAARITTSSRDEPPSMSNASEMQG-EWVEEDEPGVYITIRQLPDGTRELRRVRFSRERFG 311
Query: 1055 EKQAEQWWAANRARVYQQY 1073
E A+ WW NR R+ QY
Sbjct: 312 EVHAKTWWEQNRDRIQTQY 330
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 174 (66.3 bits), Expect = 6.7e-13, Sum P(4) = 6.7e-13
Identities = 42/156 (26%), Positives = 79/156 (50%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V + + G +H+ G+++SWG GRLG G + P+LI L+N + V G
Sbjct: 441 VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGT 500
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNE-MSLWLPKKLNGPLEGIHVSSVSCGPWHTA 425
H+ + + ++YTWG N F LGHGN+ + ++ PK + V +S G +++
Sbjct: 501 SHSGCIDSNYNVYTWG--NGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSL 558
Query: 426 VVTSAGQLFTFGDGTFGVLGHGDRISVST-PREVDS 460
+ G ++ +G TF + + +S P+++++
Sbjct: 559 ALNVKGDVYVWG--TFNITNNYVNYYISKLPKQINT 592
Score = 133 (51.9 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 40/116 (34%), Positives = 54/116 (46%)
Query: 531 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACG 588
C HSL A G +Y+ G G+LG + K+ K P ++G K + + G
Sbjct: 444 CSAGSKHSL--ACNLHGDIYSWGYGGNGRLGLGNIKSYNK-PQLIKGLRNKRILY-VCAG 499
Query: 589 DYHVAVLTSRTEVYTWGKGANGRLGHGDTD-DRNFPSLVEALKDKQVKSIVCGTSF 643
H + S VYTWG G +LGHG+ D D +P LVE L + VC SF
Sbjct: 500 TSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKK---VCMLSF 552
Score = 127 (49.8 bits), Expect = 6.0e-10, Sum P(4) = 6.0e-10
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 579 KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 638
KN V + G H ++Y+WG G NGRLG G+ N P L++ L++K++ +
Sbjct: 438 KNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVC 497
Query: 639 CGTSFTAAI 647
GTS + I
Sbjct: 498 AGTSHSGCI 506
Score = 111 (44.1 bits), Expect = 3.2e-09, Sum P(5) = 3.2e-09
Identities = 18/54 (33%), Positives = 34/54 (62%)
Query: 349 KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP 402
K++ KN ++ ++CG+ HT A+ G +Y+WG +N FG +G+G +++ P
Sbjct: 341 KIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNN--FGCIGNGTNQNVYEP 392
Score = 100 (40.3 bits), Expect = 6.7e-13, Sum P(4) = 6.7e-13
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 540 TVALTTTGHVYTMGSPVYGQLGDPKAN--GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+V L +G VYT G G+LG+ + N K + + N + +IACG +V ++
Sbjct: 764 SVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIACGYNYVLCVSD 823
Query: 598 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
VY WGK +LG G D P V+ L + V +I G +A I
Sbjct: 824 VGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTN--VINIFAGYDHSACI 871
Score = 95 (38.5 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 458
P K+ P + + +SCG HT + + G L+++G FG +G+G +V P +
Sbjct: 339 PMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPI 395
Score = 83 (34.3 bits), Expect = 8.6e-08, Sum P(4) = 8.6e-08
Identities = 34/140 (24%), Positives = 59/140 (42%)
Query: 342 DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG--DMYTWGGSNCNFGLLGHGNEMSL 399
D D+ H + I+ L +H+ C ++TWGG++CN LG N
Sbjct: 8 DKDI-HKYIFPFFPKISTGL----DHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRF-- 60
Query: 400 WLPKKLNGP-----LEGIHVSSVSCGPWHTAV-----VTSAG-QLFTFGDGTFGVLGHGD 448
+N P + V+S+ C + T V V G +++FG G G+LG+
Sbjct: 61 -----VNNPTVVCFFDSFIVASICCTNYATFVLVKKNVNDIGCSVYSFGKGNNGLLGYKK 115
Query: 449 RISVSTPREVDSLKGLRTVR 468
+ + E + K ++ V+
Sbjct: 116 KRELPNFLEHEEKKNIQKVK 135
Score = 82 (33.9 bits), Expect = 0.00065, Sum P(5) = 0.00065
Identities = 40/140 (28%), Positives = 67/140 (47%)
Query: 349 KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 408
KL+ LK+ V+++ +H + + SG +YT G N N G LG+G E +L KK P
Sbjct: 747 KLV--LKS-KVKIIDGSDHFSVFLLESGKVYT-AGYNKN-GELGNG-EFNL--KKKFGVP 798
Query: 409 -LEGIHVSSV---SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL 464
L I V+ + +CG + V+ G ++ +G LG G P V +L +
Sbjct: 799 ILLNICVNKIIKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTNV 858
Query: 465 RTVRAACGVWHTAAVVEVMV 484
+ A G H+A ++ ++
Sbjct: 859 INIFA--GYDHSACIINKLL 876
Score = 76 (31.8 bits), Expect = 1.6e-10, Sum P(4) = 1.6e-10
Identities = 31/114 (27%), Positives = 50/114 (43%)
Query: 537 HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 596
H V L + YT + + G G+ KL + K+ V+ I D+ L
Sbjct: 717 HIDNVTLNNNDNYYTYDN-INGSHGNIFEKNKL-------VLKSKVKIIDGSDHFSVFLL 768
Query: 597 SRTEVYTWGKGANGRLGHGDTD-DRNF--PSLVEALKDKQVKSIVCGTSFTAAI 647
+VYT G NG LG+G+ + + F P L+ +K +K I CG ++ +
Sbjct: 769 ESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIK-IACGYNYVLCV 821
Score = 76 (31.8 bits), Expect = 7.6e-06, Sum P(5) = 7.6e-06
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 290 KMDSFVP---KAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 346
K D F P K V ++ I+CG H + G ++SWG G +G+G + +V
Sbjct: 331 KHDWFTPFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVY 390
Query: 347 HP 348
P
Sbjct: 391 EP 392
Score = 73 (30.8 bits), Expect = 3.2e-09, Sum P(5) = 3.2e-09
Identities = 38/164 (23%), Positives = 61/164 (37%)
Query: 393 HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV 452
H E S+ KK N IH S+ G H+ G ++++G G G LG G+ S
Sbjct: 426 HKKEDSIKWDKKKNVV---IHCSA---GSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSY 479
Query: 453 STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXX 512
+ P+ + L+ R + G H+ + ++TW
Sbjct: 480 NKPQLIKGLRNKRILYVCAGTSHSGCI------------DSNYNVYTWGNGKFYKLGHGN 527
Query: 513 KEARLV-PTCVAALVE-PNFCQVSCGHSLTVALTTTGHVYTMGS 554
+ + P V L C +S G ++AL G VY G+
Sbjct: 528 DDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWGT 571
Score = 71 (30.1 bits), Expect = 5.1e-10, Sum P(4) = 5.1e-10
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANG-----KLPTRVEGKLTKN-FVEEIA 586
S G+S ++ LT T +Y GS G+LG K+ +PT+V L N ++++I
Sbjct: 945 SLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVI--LHNNIYIKDIL 1002
Query: 587 CGDYHVAVLTSRTEVYTWG---KGANG 610
G+ + +L+ +Y +G KG+NG
Sbjct: 1003 AGNTYSIILSVDGFIYIFGEFIKGSNG 1029
Score = 69 (29.3 bits), Expect = 8.0e-10, Sum P(4) = 8.0e-10
Identities = 27/116 (23%), Positives = 51/116 (43%)
Query: 547 GHVYTMGSPVYGQ--LGDPKANG--KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 602
G +Y G+ G+ LG G LP ++ N + + + G+ H LT+ E+Y
Sbjct: 905 GDLYIWGNAESGKVGLGVDYTQGCILLPRKIN---IINKIYKCSLGNSHSLFLTNTNELY 961
Query: 603 TWGKGANGRLGHGDTDDR-----NFPSLVEALKDKQVKSIVCGTSFTAAICLHKWV 653
G NGRLG + + P+ V + +K I+ G +++ + + ++
Sbjct: 962 VCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSVDGFI 1017
Score = 66 (28.3 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 25/100 (25%), Positives = 47/100 (47%)
Query: 310 IACGGRHAALVT---KQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVACG 365
I+ G H A V + +F+WG +LG G+++ V++P ++ + V + C
Sbjct: 22 ISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCT 81
Query: 366 EHHTCAVT------LSGDMYTWGGSNCNFGLLGHGNEMSL 399
+ T + + +Y++G N N GLLG+ + L
Sbjct: 82 NYATFVLVKKNVNDIGCSVYSFGKGN-N-GLLGYKKKREL 119
Score = 56 (24.8 bits), Expect = 6.7e-13, Sum P(4) = 6.7e-13
Identities = 17/71 (23%), Positives = 34/71 (47%)
Query: 736 MNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQ 795
+N +N+ + +N HV+ T M+ LK + K+ KK++ N+ + N +
Sbjct: 1566 INDMYNDRMVVDKNI----HVKNSTHMD-LKNDGANKKKKIKKKKNNKKKNNKKKNNKKK 1620
Query: 796 GNALNNSKSSN 806
N N+ ++N
Sbjct: 1621 NNKKKNNNNNN 1631
Score = 56 (24.8 bits), Expect = 8.6e-08, Sum P(4) = 8.6e-08
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGD 562
+SCG T+A+ T G +Y+ G +G +G+
Sbjct: 354 ISCGDMHTLAICTGGVLYSWGYNNFGCIGN 383
Score = 54 (24.1 bits), Expect = 2.4e-08, Sum P(4) = 2.4e-08
Identities = 38/169 (22%), Positives = 69/169 (40%)
Query: 518 VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKL 577
VPT V + G++ ++ L+ G +Y G + G G+ + ++
Sbjct: 986 VPTKVILHNNIYIKDILAGNTYSIILSVDGFIYIFGEFIKGSNGNSNNMSCEVISLYNEI 1045
Query: 578 TKNFVEEIACGDY-HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF---PSLVEA-LKD- 631
T V+ + G Y HV LT +++ G N ++ + + N+ P L+ LK+
Sbjct: 1046 TN--VKYMN-GKYEHVFFLTYDNKLFGIGNNKNCQILCDNEKENNYIKKPKLITYFLKEN 1102
Query: 632 -KQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSGCRIPFNFKRKRH 675
K ++SI + T + W + +C G IP N K +H
Sbjct: 1103 NKIIESIFSFHNVTFIQFNNSEIFAWGYTNNYHLCIG--IPNNIKYLKH 1149
Score = 49 (22.3 bits), Expect = 7.3e-08, Sum P(4) = 7.3e-08
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
+++CG++ + ++ G VY G QLG
Sbjct: 810 KIACGYNYVLCVSDVGLVYGWGKNDKSQLG 839
Score = 42 (19.8 bits), Expect = 6.7e-13, Sum P(4) = 6.7e-13
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 86 EKEYQSFSLIYNDRSLDLICKDKDEAEVWFT 116
EK+ + ++ N L K+ D WFT
Sbjct: 306 EKKKEKMNIYKNKEKLYSNIKENDNKHDWFT 336
Score = 38 (18.4 bits), Expect = 4.1e-11, Sum P(4) = 4.1e-11
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 776 NKKQEFNRTRGLPLPNGVSQGNALNNSKS 804
NK + T G+ N V+ N +NN S
Sbjct: 873 NKLLDKGNTNGVNNVNNVNGVNGVNNYSS 901
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 174 (66.3 bits), Expect = 6.7e-13, Sum P(4) = 6.7e-13
Identities = 42/156 (26%), Positives = 79/156 (50%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGE 366
V + + G +H+ G+++SWG GRLG G + P+LI L+N + V G
Sbjct: 441 VIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGT 500
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNE-MSLWLPKKLNGPLEGIHVSSVSCGPWHTA 425
H+ + + ++YTWG N F LGHGN+ + ++ PK + V +S G +++
Sbjct: 501 SHSGCIDSNYNVYTWG--NGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSL 558
Query: 426 VVTSAGQLFTFGDGTFGVLGHGDRISVST-PREVDS 460
+ G ++ +G TF + + +S P+++++
Sbjct: 559 ALNVKGDVYVWG--TFNITNNYVNYYISKLPKQINT 592
Score = 133 (51.9 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 40/116 (34%), Positives = 54/116 (46%)
Query: 531 CQVSCGHSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACG 588
C HSL A G +Y+ G G+LG + K+ K P ++G K + + G
Sbjct: 444 CSAGSKHSL--ACNLHGDIYSWGYGGNGRLGLGNIKSYNK-PQLIKGLRNKRILY-VCAG 499
Query: 589 DYHVAVLTSRTEVYTWGKGANGRLGHGDTD-DRNFPSLVEALKDKQVKSIVCGTSF 643
H + S VYTWG G +LGHG+ D D +P LVE L + VC SF
Sbjct: 500 TSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKK---VCMLSF 552
Score = 127 (49.8 bits), Expect = 6.0e-10, Sum P(4) = 6.0e-10
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 579 KNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIV 638
KN V + G H ++Y+WG G NGRLG G+ N P L++ L++K++ +
Sbjct: 438 KNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVC 497
Query: 639 CGTSFTAAI 647
GTS + I
Sbjct: 498 AGTSHSGCI 506
Score = 111 (44.1 bits), Expect = 3.2e-09, Sum P(5) = 3.2e-09
Identities = 18/54 (33%), Positives = 34/54 (62%)
Query: 349 KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLP 402
K++ KN ++ ++CG+ HT A+ G +Y+WG +N FG +G+G +++ P
Sbjct: 341 KIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNN--FGCIGNGTNQNVYEP 392
Score = 100 (40.3 bits), Expect = 6.7e-13, Sum P(4) = 6.7e-13
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 540 TVALTTTGHVYTMGSPVYGQLGDPKAN--GKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
+V L +G VYT G G+LG+ + N K + + N + +IACG +V ++
Sbjct: 764 SVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIACGYNYVLCVSD 823
Query: 598 RTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI 647
VY WGK +LG G D P V+ L + V +I G +A I
Sbjct: 824 VGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTN--VINIFAGYDHSACI 871
Score = 95 (38.5 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 402 PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV 458
P K+ P + + +SCG HT + + G L+++G FG +G+G +V P +
Sbjct: 339 PMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPI 395
Score = 83 (34.3 bits), Expect = 8.6e-08, Sum P(4) = 8.6e-08
Identities = 34/140 (24%), Positives = 59/140 (42%)
Query: 342 DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG--DMYTWGGSNCNFGLLGHGNEMSL 399
D D+ H + I+ L +H+ C ++TWGG++CN LG N
Sbjct: 8 DKDI-HKYIFPFFPKISTGL----DHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRF-- 60
Query: 400 WLPKKLNGP-----LEGIHVSSVSCGPWHTAV-----VTSAG-QLFTFGDGTFGVLGHGD 448
+N P + V+S+ C + T V V G +++FG G G+LG+
Sbjct: 61 -----VNNPTVVCFFDSFIVASICCTNYATFVLVKKNVNDIGCSVYSFGKGNNGLLGYKK 115
Query: 449 RISVSTPREVDSLKGLRTVR 468
+ + E + K ++ V+
Sbjct: 116 KRELPNFLEHEEKKNIQKVK 135
Score = 82 (33.9 bits), Expect = 0.00065, Sum P(5) = 0.00065
Identities = 40/140 (28%), Positives = 67/140 (47%)
Query: 349 KLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 408
KL+ LK+ V+++ +H + + SG +YT G N N G LG+G E +L KK P
Sbjct: 747 KLV--LKS-KVKIIDGSDHFSVFLLESGKVYT-AGYNKN-GELGNG-EFNL--KKKFGVP 798
Query: 409 -LEGIHVSSV---SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL 464
L I V+ + +CG + V+ G ++ +G LG G P V +L +
Sbjct: 799 ILLNICVNKIIKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTNV 858
Query: 465 RTVRAACGVWHTAAVVEVMV 484
+ A G H+A ++ ++
Sbjct: 859 INIFA--GYDHSACIINKLL 876
Score = 76 (31.8 bits), Expect = 1.6e-10, Sum P(4) = 1.6e-10
Identities = 31/114 (27%), Positives = 50/114 (43%)
Query: 537 HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 596
H V L + YT + + G G+ KL + K+ V+ I D+ L
Sbjct: 717 HIDNVTLNNNDNYYTYDN-INGSHGNIFEKNKL-------VLKSKVKIIDGSDHFSVFLL 768
Query: 597 SRTEVYTWGKGANGRLGHGDTD-DRNF--PSLVEALKDKQVKSIVCGTSFTAAI 647
+VYT G NG LG+G+ + + F P L+ +K +K I CG ++ +
Sbjct: 769 ESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIK-IACGYNYVLCV 821
Score = 76 (31.8 bits), Expect = 7.6e-06, Sum P(5) = 7.6e-06
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 290 KMDSFVP---KAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS 346
K D F P K V ++ I+CG H + G ++SWG G +G+G + +V
Sbjct: 331 KHDWFTPFPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVY 390
Query: 347 HP 348
P
Sbjct: 391 EP 392
Score = 73 (30.8 bits), Expect = 3.2e-09, Sum P(5) = 3.2e-09
Identities = 38/164 (23%), Positives = 61/164 (37%)
Query: 393 HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV 452
H E S+ KK N IH S+ G H+ G ++++G G G LG G+ S
Sbjct: 426 HKKEDSIKWDKKKNVV---IHCSA---GSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSY 479
Query: 453 STPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXX 512
+ P+ + L+ R + G H+ + ++TW
Sbjct: 480 NKPQLIKGLRNKRILYVCAGTSHSGCI------------DSNYNVYTWGNGKFYKLGHGN 527
Query: 513 KEARLV-PTCVAALVE-PNFCQVSCGHSLTVALTTTGHVYTMGS 554
+ + P V L C +S G ++AL G VY G+
Sbjct: 528 DDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWGT 571
Score = 71 (30.1 bits), Expect = 5.1e-10, Sum P(4) = 5.1e-10
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANG-----KLPTRVEGKLTKN-FVEEIA 586
S G+S ++ LT T +Y GS G+LG K+ +PT+V L N ++++I
Sbjct: 945 SLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVI--LHNNIYIKDIL 1002
Query: 587 CGDYHVAVLTSRTEVYTWG---KGANG 610
G+ + +L+ +Y +G KG+NG
Sbjct: 1003 AGNTYSIILSVDGFIYIFGEFIKGSNG 1029
Score = 69 (29.3 bits), Expect = 8.0e-10, Sum P(4) = 8.0e-10
Identities = 27/116 (23%), Positives = 51/116 (43%)
Query: 547 GHVYTMGSPVYGQ--LGDPKANG--KLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVY 602
G +Y G+ G+ LG G LP ++ N + + + G+ H LT+ E+Y
Sbjct: 905 GDLYIWGNAESGKVGLGVDYTQGCILLPRKIN---IINKIYKCSLGNSHSLFLTNTNELY 961
Query: 603 TWGKGANGRLGHGDTDDR-----NFPSLVEALKDKQVKSIVCGTSFTAAICLHKWV 653
G NGRLG + + P+ V + +K I+ G +++ + + ++
Sbjct: 962 VCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSVDGFI 1017
Score = 66 (28.3 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 25/100 (25%), Positives = 47/100 (47%)
Query: 310 IACGGRHAALVT---KQGEVFSWGEELGGRLGHGVDSD-VSHPKLIDALKNINVELVACG 365
I+ G H A V + +F+WG +LG G+++ V++P ++ + V + C
Sbjct: 22 ISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCT 81
Query: 366 EHHTCAVT------LSGDMYTWGGSNCNFGLLGHGNEMSL 399
+ T + + +Y++G N N GLLG+ + L
Sbjct: 82 NYATFVLVKKNVNDIGCSVYSFGKGN-N-GLLGYKKKREL 119
Score = 56 (24.8 bits), Expect = 6.7e-13, Sum P(4) = 6.7e-13
Identities = 17/71 (23%), Positives = 34/71 (47%)
Query: 736 MNQGFNEAVEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQ 795
+N +N+ + +N HV+ T M+ LK + K+ KK++ N+ + N +
Sbjct: 1566 INDMYNDRMVVDKNI----HVKNSTHMD-LKNDGANKKKKIKKKKNNKKKNNKKKNNKKK 1620
Query: 796 GNALNNSKSSN 806
N N+ ++N
Sbjct: 1621 NNKKKNNNNNN 1631
Score = 56 (24.8 bits), Expect = 8.6e-08, Sum P(4) = 8.6e-08
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGD 562
+SCG T+A+ T G +Y+ G +G +G+
Sbjct: 354 ISCGDMHTLAICTGGVLYSWGYNNFGCIGN 383
Score = 54 (24.1 bits), Expect = 2.4e-08, Sum P(4) = 2.4e-08
Identities = 38/169 (22%), Positives = 69/169 (40%)
Query: 518 VPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKL 577
VPT V + G++ ++ L+ G +Y G + G G+ + ++
Sbjct: 986 VPTKVILHNNIYIKDILAGNTYSIILSVDGFIYIFGEFIKGSNGNSNNMSCEVISLYNEI 1045
Query: 578 TKNFVEEIACGDY-HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF---PSLVEA-LKD- 631
T V+ + G Y HV LT +++ G N ++ + + N+ P L+ LK+
Sbjct: 1046 TN--VKYMN-GKYEHVFFLTYDNKLFGIGNNKNCQILCDNEKENNYIKKPKLITYFLKEN 1102
Query: 632 -KQVKSIVCGTSFTAAIC----LHKWVSGVDQSMCSGCRIPFNFKRKRH 675
K ++SI + T + W + +C G IP N K +H
Sbjct: 1103 NKIIESIFSFHNVTFIQFNNSEIFAWGYTNNYHLCIG--IPNNIKYLKH 1149
Score = 49 (22.3 bits), Expect = 7.3e-08, Sum P(4) = 7.3e-08
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
+++CG++ + ++ G VY G QLG
Sbjct: 810 KIACGYNYVLCVSDVGLVYGWGKNDKSQLG 839
Score = 42 (19.8 bits), Expect = 6.7e-13, Sum P(4) = 6.7e-13
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 86 EKEYQSFSLIYNDRSLDLICKDKDEAEVWFT 116
EK+ + ++ N L K+ D WFT
Sbjct: 306 EKKKEKMNIYKNKEKLYSNIKENDNKHDWFT 336
Score = 38 (18.4 bits), Expect = 4.1e-11, Sum P(4) = 4.1e-11
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 776 NKKQEFNRTRGLPLPNGVSQGNALNNSKS 804
NK + T G+ N V+ N +NN S
Sbjct: 873 NKLLDKGNTNGVNNVNNVNGVNGVNNYSS 901
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 175 (66.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 49/176 (27%), Positives = 85/176 (48%)
Query: 310 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP------KLIDALKNINVEL-- 361
I+ G + A V G + WG G + P K +D L +N+++
Sbjct: 1120 ISAGCAYCACVV-DGTAYFWGSS-GIPSYYSAQKSTEPPEPAHAVKSLDLLSQLNLQVHA 1177
Query: 362 VACGEHHTCAVTLSGDMYTWGGSN-CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 420
+ CG HT +T +G +Y+ G +N C G+ G M + L L L+G++++ + G
Sbjct: 1178 IKCGRQHTLILTNNG-LYSLGNNNLCQLGI---GRHMQMALQPMLVTALDGMNITMLEAG 1233
Query: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 476
+H A V G+L+ +G G +G LG G +++TP+ V K + ++ + G HT
Sbjct: 1234 QYHNAAVAD-GKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHT 1288
Score = 154 (59.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 47/160 (29%), Positives = 77/160 (48%)
Query: 301 SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVS-HPKLIDALKNINV 359
S + L V I CG +H ++T G ++S G +LG G ++ P L+ AL +N+
Sbjct: 1169 SQLNLQVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNI 1227
Query: 360 ELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSC 419
++ G++H AV G +Y WG +G LG G+ ++ P+ ++ + + +S
Sbjct: 1228 TMLEAGQYHNAAVA-DGKLYMWGWGI--YGQLGQGSCENIATPQLVSF-FKFKKILQISL 1283
Query: 420 GPWHTAVVTSA-----------GQLFTFGDGTFGVLGHGD 448
G HT V+ A +LF FG FG LG G+
Sbjct: 1284 GHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGN 1323
Score = 101 (40.6 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 43/158 (27%), Positives = 71/158 (44%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
P V + +++ + G H A V G+++ WG + G+LG G +++ P+L+ K
Sbjct: 1216 PMLVTALDGMNITMLEAGQYHNAAVA-DGKLYMWGWGIYGQLGQGSCENIATPQLVSFFK 1274
Query: 356 NINVELVACGEHHT---CAVTLS--------GDMYTWGGSNCNFGLLGHGNEMSLWLPKK 404
+ ++ G HT C S +++ +G SN +FG LG GN S K
Sbjct: 1275 FKKILQISLGHAHTLVLCGAPNSHMEANHCGNELFVFG-SN-HFGQLGTGN--SDHGDTK 1330
Query: 405 LNGPLEGIHVSSVSCGPWHTAVVTSAG-----QLFTFG 437
N P+ + V S HT T+ +LFT+G
Sbjct: 1331 TNLPVR-LEVGDCSLRLIHTKFFTNLAVDEQDRLFTWG 1367
Score = 92 (37.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 26/92 (28%), Positives = 44/92 (47%)
Query: 555 PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 614
PV DP + P V+ + +I+ G +H +++S +YTWGK +LG
Sbjct: 1477 PVLVPEPDPTEH-LTPHLVDTSEVAGRILQISSGLFHFCLISSSCTLYTWGKNLEHQLGT 1535
Query: 615 GDTDDRNF--PSLVEALKDKQVKSIVCGTSFT 644
D D R PS +++++ + CG+ FT
Sbjct: 1536 EDKDRRAVLKPSPIDSIERPMY--VDCGSDFT 1565
Score = 67 (28.6 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 497 LFTWXXXXXXXXXXXXKEARLV--PTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
L+TW K+ R V P+ + ++ P + V CG T+ +TT V G
Sbjct: 1522 LYTWGKNLEHQLGTEDKDRRAVLKPSPIDSIERPMY--VDCGSDFTLVMTTDHVVRAFGG 1579
Query: 555 PVYGQLG 561
GQ G
Sbjct: 1580 NSNGQCG 1586
Score = 59 (25.8 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 28/103 (27%), Positives = 45/103 (43%)
Query: 517 LVPTCV-AALVEPNFCQVSCG--HSLTVALTTTGHVYTMGSPVYGQLG--DPKANGKL-P 570
L P V + V Q+S G H ++ + T +YT G + QLG D L P
Sbjct: 1489 LTPHLVDTSEVAGRILQISSGLFHFCLISSSCT--LYTWGKNLEHQLGTEDKDRRAVLKP 1546
Query: 571 TRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 613
+ ++ +V+ CG V+T+ V +G +NG+ G
Sbjct: 1547 SPIDSIERPMYVD---CGSDFTLVMTTDHVVRAFGGNSNGQCG 1586
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 200 (75.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 73/277 (26%), Positives = 116/277 (41%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALK-NINVELVA 363
VQ +A GG H+ + G V++WG G+L S + P+ ++ K I +
Sbjct: 141 VQQVAAGGLHS-MALAGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIV 199
Query: 364 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 423
G H+ A T S + Y WG +N + G LG+G +S +P+K+ P I + +S G H
Sbjct: 200 AGGSHSIAYT-STEAYAWG-NNAS-GQLGNGTTLSNHMPQKVQLP-SSITIRKISAGGSH 255
Query: 424 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 483
+ S G ++ +G +G LG+G + STP ++ T+ A GV ++V
Sbjct: 256 NLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQL-------TLPA--GV---TGFIDVF 303
Query: 484 VGXXXXXXXXXG-KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVS----CGHS 538
G ++TW +L P V F V G
Sbjct: 304 AGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSF 363
Query: 539 LTVALTT-TGHVYTMGSPVYGQLGD-PKANGKLPTRV 573
T+ +G ++ G YGQLGD +N P +V
Sbjct: 364 FTIVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQV 400
Score = 192 (72.6 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 49/172 (28%), Positives = 83/172 (48%)
Query: 294 FVPKAVESAVV-LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 352
F P+ VE+A + + I GG H+ T E ++WG G+LG+G P+ +
Sbjct: 181 FAPRQVETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLGNGTTLSNHMPQKVQ 239
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 412
+I + ++ G H A+ +G ++ WG SN +G LG+G + P +L P
Sbjct: 240 LPSSITIRKISAGGSHNLALDSTGAIWAWG-SNA-YGQLGNGTTTNQSTPVQLTLPAGVT 297
Query: 413 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG---HGDRISVSTPREVDSL 461
V GP H+ V S ++T+G T G+L GD++S + R+ ++
Sbjct: 298 GFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNV 349
Score = 180 (68.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 85/344 (24%), Positives = 139/344 (40%)
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT-- 373
H+A+ + WG G+LG G + + PK + A G HT A+
Sbjct: 42 HSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIARF 101
Query: 374 --LSGDMYTWGGSNCNFGLLGH--GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 429
+SG + WG ++ G +G + P K+ G G V V+ G H+ + +
Sbjct: 102 DNVSG-VRAWGSNSA--GQIGRDPATVPTSSTPVKIGG--FGGAVQQVAAGGLHSMAL-A 155
Query: 430 AGQLFTFGDGTFGVLGHGDRISVST---PREVDSLKGLRTVRAACGVWHTAAVVEVMVGX 486
G ++ +G + G L IS +T PR+V++ K + TA ++ G
Sbjct: 156 GGTVWAWGSNSAGQLALNP-ISSATRFAPRQVETAK--------LPIAPTA----IVAGG 202
Query: 487 XXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
+ + W + +P V ++S G S +AL +T
Sbjct: 203 SHSIAYTSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDST 262
Query: 547 GHVYTMGSPVYGQLGD-PKANGKLPTRVEGKL-TKNFVEEIACGDYHVAVLTSRTEVYTW 604
G ++ GS YGQLG+ N P ++ F++ A + VAV ++ T VYTW
Sbjct: 263 GAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFT-VYTW 321
Query: 605 GKGANGRLGHGDTDDRNFPSLVEALKD---KQVKSIVC-GTSFT 644
G G L G T D+ P+ V + V+ +V G+ FT
Sbjct: 322 GFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFT 365
Score = 151 (58.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 47/187 (25%), Positives = 85/187 (45%)
Query: 279 GIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
G + SG G + + +P+ V+ + ++ I+ GG H + G +++WG G+L
Sbjct: 217 GNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQL 276
Query: 338 GHGVDSDVSHPKLIDALKNINVEL-VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 396
G+G ++ S P + + + V G H+ AV + +YTWG + GLL G
Sbjct: 277 GNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNT--LGLLSVGTT 334
Query: 397 MSLWLPKKL----NGPLEGIHVSSVSCGPWHTAVVTS-AGQLFTFGDGTFGVLGHGDRIS 451
P ++ N P + V G + T V + +G ++ +G +G LG G +
Sbjct: 335 GDQLSPAQVRDASNVPFTDVE-RVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGTTSN 393
Query: 452 VSTPREV 458
+ P +V
Sbjct: 394 RTAPVQV 400
Score = 140 (54.3 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 69/254 (27%), Positives = 100/254 (39%)
Query: 406 NGPLEGIHVSSVSCGPW-HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL 464
+G L +S+S + H+AV + L +G+ G LG G S +TP+ + G
Sbjct: 24 DGDLPYSDSTSISSPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRL--GF 81
Query: 465 RTVRA--ACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCV 522
T + A G HT A+ G + W ++ VPT
Sbjct: 82 ATYSSGFATGASHTLAIARF--------DNVSG-VRAWGSNSAGQIG---RDPATVPTSS 129
Query: 523 AALVEPNFC----QVSCG--HSLTVALTTTGHVYTMGSPVYGQLG-DP--KANGKLPTRV 573
+ F QV+ G HS+ +A G V+ GS GQL +P A P +V
Sbjct: 130 TPVKIGGFGGAVQQVAAGGLHSMALA---GGTVWAWGSNSAGQLALNPISSATRFAPRQV 186
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 633
E I G H TS TE Y WG A+G+LG+G T + P V+
Sbjct: 187 ETAKLPIAPTAIVAGGSHSIAYTS-TEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSIT 245
Query: 634 VKSIVCGTSFTAAI 647
++ I G S A+
Sbjct: 246 IRKISAGGSHNLAL 259
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 200 (75.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 73/277 (26%), Positives = 116/277 (41%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALK-NINVELVA 363
VQ +A GG H+ + G V++WG G+L S + P+ ++ K I +
Sbjct: 141 VQQVAAGGLHS-MALAGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIV 199
Query: 364 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH 423
G H+ A T S + Y WG +N + G LG+G +S +P+K+ P I + +S G H
Sbjct: 200 AGGSHSIAYT-STEAYAWG-NNAS-GQLGNGTTLSNHMPQKVQLP-SSITIRKISAGGSH 255
Query: 424 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVM 483
+ S G ++ +G +G LG+G + STP ++ T+ A GV ++V
Sbjct: 256 NLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQL-------TLPA--GV---TGFIDVF 303
Query: 484 VGXXXXXXXXXG-KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVS----CGHS 538
G ++TW +L P V F V G
Sbjct: 304 AGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSF 363
Query: 539 LTVALTT-TGHVYTMGSPVYGQLGD-PKANGKLPTRV 573
T+ +G ++ G YGQLGD +N P +V
Sbjct: 364 FTIVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQV 400
Score = 192 (72.6 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 49/172 (28%), Positives = 83/172 (48%)
Query: 294 FVPKAVESAVV-LDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID 352
F P+ VE+A + + I GG H+ T E ++WG G+LG+G P+ +
Sbjct: 181 FAPRQVETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLGNGTTLSNHMPQKVQ 239
Query: 353 ALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI 412
+I + ++ G H A+ +G ++ WG SN +G LG+G + P +L P
Sbjct: 240 LPSSITIRKISAGGSHNLALDSTGAIWAWG-SNA-YGQLGNGTTTNQSTPVQLTLPAGVT 297
Query: 413 HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG---HGDRISVSTPREVDSL 461
V GP H+ V S ++T+G T G+L GD++S + R+ ++
Sbjct: 298 GFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNV 349
Score = 180 (68.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 85/344 (24%), Positives = 139/344 (40%)
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVT-- 373
H+A+ + WG G+LG G + + PK + A G HT A+
Sbjct: 42 HSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIARF 101
Query: 374 --LSGDMYTWGGSNCNFGLLGH--GNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 429
+SG + WG ++ G +G + P K+ G G V V+ G H+ + +
Sbjct: 102 DNVSG-VRAWGSNSA--GQIGRDPATVPTSSTPVKIGG--FGGAVQQVAAGGLHSMAL-A 155
Query: 430 AGQLFTFGDGTFGVLGHGDRISVST---PREVDSLKGLRTVRAACGVWHTAAVVEVMVGX 486
G ++ +G + G L IS +T PR+V++ K + TA ++ G
Sbjct: 156 GGTVWAWGSNSAGQLALNP-ISSATRFAPRQVETAK--------LPIAPTA----IVAGG 202
Query: 487 XXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTT 546
+ + W + +P V ++S G S +AL +T
Sbjct: 203 SHSIAYTSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDST 262
Query: 547 GHVYTMGSPVYGQLGD-PKANGKLPTRVEGKL-TKNFVEEIACGDYHVAVLTSRTEVYTW 604
G ++ GS YGQLG+ N P ++ F++ A + VAV ++ T VYTW
Sbjct: 263 GAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFT-VYTW 321
Query: 605 GKGANGRLGHGDTDDRNFPSLVEALKD---KQVKSIVC-GTSFT 644
G G L G T D+ P+ V + V+ +V G+ FT
Sbjct: 322 GFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFT 365
Score = 151 (58.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 47/187 (25%), Positives = 85/187 (45%)
Query: 279 GIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRL 337
G + SG G + + +P+ V+ + ++ I+ GG H + G +++WG G+L
Sbjct: 217 GNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQL 276
Query: 338 GHGVDSDVSHPKLIDALKNINVEL-VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 396
G+G ++ S P + + + V G H+ AV + +YTWG + GLL G
Sbjct: 277 GNGTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNT--LGLLSVGTT 334
Query: 397 MSLWLPKKL----NGPLEGIHVSSVSCGPWHTAVVTS-AGQLFTFGDGTFGVLGHGDRIS 451
P ++ N P + V G + T V + +G ++ +G +G LG G +
Sbjct: 335 GDQLSPAQVRDASNVPFTDVE-RVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGTTSN 393
Query: 452 VSTPREV 458
+ P +V
Sbjct: 394 RTAPVQV 400
Score = 140 (54.3 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 69/254 (27%), Positives = 100/254 (39%)
Query: 406 NGPLEGIHVSSVSCGPW-HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGL 464
+G L +S+S + H+AV + L +G+ G LG G S +TP+ + G
Sbjct: 24 DGDLPYSDSTSISSPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRL--GF 81
Query: 465 RTVRA--ACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCV 522
T + A G HT A+ G + W ++ VPT
Sbjct: 82 ATYSSGFATGASHTLAIARF--------DNVSG-VRAWGSNSAGQIG---RDPATVPTSS 129
Query: 523 AALVEPNFC----QVSCG--HSLTVALTTTGHVYTMGSPVYGQLG-DP--KANGKLPTRV 573
+ F QV+ G HS+ +A G V+ GS GQL +P A P +V
Sbjct: 130 TPVKIGGFGGAVQQVAAGGLHSMALA---GGTVWAWGSNSAGQLALNPISSATRFAPRQV 186
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 633
E I G H TS TE Y WG A+G+LG+G T + P V+
Sbjct: 187 ETAKLPIAPTAIVAGGSHSIAYTS-TEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSIT 245
Query: 634 VKSIVCGTSFTAAI 647
++ I G S A+
Sbjct: 246 IRKISAGGSHNLAL 259
>TAIR|locus:2088212 [details] [associations]
symbol:ATBRXL2 "AT3G14000" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AB019229 HOGENOM:HOG000240563 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 EMBL:AK117522 EMBL:BT029002 IPI:IPI00533673
RefSeq:NP_188016.2 RefSeq:NP_974309.1 UniGene:At.39306
EnsemblPlants:AT3G14000.1 EnsemblPlants:AT3G14000.2 GeneID:820614
KEGG:ath:AT3G14000 TAIR:At3g14000 eggNOG:NOG241055
InParanoid:Q8GYL9 OMA:IETEWVE PhylomeDB:Q8GYL9
ProtClustDB:CLSN2690922 Genevestigator:Q8GYL9 Uniprot:Q8GYL9
Length = 374
Score = 201 (75.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 36/54 (66%), Positives = 42/54 (77%)
Query: 1020 EWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQY 1073
EWVEQDE GVYIT+ ALP G ++L+RVRFSR+KF E A WW NRAR+ QQY
Sbjct: 320 EWVEQDEAGVYITIRALPDGTRELRRVRFSREKFGETNARLWWEQNRARIQQQY 373
Score = 186 (70.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 54/171 (31%), Positives = 83/171 (48%)
Query: 918 IKSLTAQLKDMAEMLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPXXXXX 977
IKSLT+Q+KDMA + GA ++ S + S A + S+ F+ A
Sbjct: 40 IKSLTSQIKDMA-VKASGAYKSCKPCSGSSNQNKNRSYADSDVASNSGRFRYAYKRAGSG 98
Query: 978 XXXXXXXDFG-DNRSPS--QTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLV 1034
++R E + + + ++ E + EWV Q E GV IT V
Sbjct: 99 SSTPKILGKEMESRLKGFLSGEGTPESMSGRTESTVFMEEEDELKEWVAQVEPGVLITFV 158
Query: 1035 ALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSVSI 1085
+LP G D+KR+RFSR+ F + QA++WWA N +V + YNV ++ SV +
Sbjct: 159 SLPEGGNDMKRIRFSREMFDKWQAQKWWAENFDKVMELYNVQQFNQQSVPL 209
Score = 41 (19.5 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 28/139 (20%), Positives = 56/139 (40%)
Query: 9 APVERDIELAITALKKGAHLLKYGRRGKPKFCPFRLANDESILIWISGKEEKHLKLSHVS 68
A VE + + +L +G + +K R + F ++ W + +K ++L +V
Sbjct: 147 AQVEPGVLITFVSLPEGGNDMKRIRFSREMFDKWQAQK------WWAENFDKVMELYNVQ 200
Query: 69 RIIPGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRSHYR 128
+ Q P+ PR E N + + K+ + G + S +H
Sbjct: 201 QFNQ-QSVPL-PTPPRSEDGSSRIQSTKNGPATPPLNKECSRGK----GYASSGSLAHQP 254
Query: 129 KGRAESRSDEVSSVATSPR 147
+ +SR + S +AT+P+
Sbjct: 255 TTQTQSRHHDSSGLATTPK 273
Score = 39 (18.8 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSI 637
NG + D+ ++E + KQ+KS+
Sbjct: 15 NGGSKKQEEDEEEEDRVIETPRSKQIKSL 43
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 209 (78.6 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 95/350 (27%), Positives = 150/350 (42%)
Query: 266 IWGE-CTGDGILGGGIHRSGS-----YAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 319
+WG D LG HRS Y V S VP + V ++CG H+ +
Sbjct: 137 VWGMGLNKDSQLG--FHRSRKDKTRGYEYVLEPSPVPLPLHRPQETQVLQVSCGRAHSLV 194
Query: 320 VTKQGEVFSWGEELGGRLGHGV-DSDV-SHPKLIDALKNINVELV--ACGEHHTCAVTLS 375
+T VFS G G+ G V ++++ S + +++ + ++V ACG+ H+ +T
Sbjct: 195 LTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQVVQVACGQDHSLFLTDK 254
Query: 376 GDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 434
G++Y+ G G++ GL GH N S P KL G L G++V V+ V++ G LF
Sbjct: 255 GEVYSCGWGADGQTGL-GHYNITSA--PTKLGGDLAGVNVVQVATYGDCCLAVSADGSLF 311
Query: 435 TFGDGTFGVLGH-GDRISVSTPREVDSLKGLRTVR-AACGVWHTAAVVEVMVGXXXXXXX 492
+G+ + L D V+ PR + G+ V+ AACG G
Sbjct: 312 GWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGQVKQAACG------------GTGCAVLN 358
Query: 493 XXGKLFTWXXXXXXXXXXXXKEA--RLVPTCVAALVEPN----FCQVSCGHSLTVALTTT 546
G +F W + A ++P + L E N ++ CG S ALT
Sbjct: 359 GEGHVFVWGYGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFAALTDR 418
Query: 547 GHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVL 595
G ++ G + G LG + + P RV + V+ +ACG H+ L
Sbjct: 419 GELFVWGKNIRGCLGIGRLEDQYFPWRVT--MPGEPVD-VACGVDHMVTL 465
Score = 190 (71.9 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 75/291 (25%), Positives = 117/291 (40%)
Query: 362 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPK-KLNG--PLEGIHVSSV 417
V+CG H+ +T +++ G N ++G G E ++ K++ +G V V
Sbjct: 185 VSCGRAHSLVLTDGEGVFSMG--NNSYGQCGRKVVENEIYSESHKVHRMQDFDG-QVVQV 241
Query: 418 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS-LKGLRTVRAACGVWHT 476
+CG H+ +T G++++ G G G G G S P ++ L G+ V+ A
Sbjct: 242 ACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAGVNVVQVAT----- 296
Query: 477 AAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARL-VPTCVAALVEPNFCQVSC 535
G G LF W ++ VP C+ Q +C
Sbjct: 297 -------YGDCCLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAAC 349
Query: 536 GHSLTVALTTTGHVYTMGSPVYGQ---LGDPKANGKLPTRVEGKLTKN---FVEEIACGD 589
G + L GHV+ G + G+ L + +P + G N V I CG
Sbjct: 350 GGTGCAVLNGEGHVFVWGYGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGL 409
Query: 590 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 640
H A LT R E++ WGK G LG G +D+ FP V + + V + CG
Sbjct: 410 SHFAALTDRGELFVWGKNIRGCLGIGRLEDQYFPWRV-TMPGEPV-DVACG 458
Score = 179 (68.1 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 72/249 (28%), Positives = 106/249 (42%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP-KLIDALKNINVELVACG 365
V +ACG H+ +T +GEV+S G G+ G G + S P KL L +NV VA
Sbjct: 238 VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAGVNVVQVATY 297
Query: 366 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCGPWHT 424
AV+ G ++ WG S L + + +P+ L P G+ V +CG
Sbjct: 298 GDCCLAVSADGSLFGWGNSEY-LQLASVTDSTQVNVPRCL--PFSGVGQVKQAACGGTGC 354
Query: 425 AVVTSAGQLFTFGDGTFGVLGHGDR-ISVSTPREVD-SLKGL-------RTVRAACGVWH 475
AV+ G +F +G +G+LG G + + P + +L GL R R CG+ H
Sbjct: 355 AVLNGEGHVFVWG---YGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSH 411
Query: 476 TAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSC 535
AA+ + G+LF W E + P V EP V+C
Sbjct: 412 FAALTD------------RGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEP--VDVAC 457
Query: 536 G--HSLTVA 542
G H +T+A
Sbjct: 458 GVDHMVTLA 466
Score = 143 (55.4 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 55/181 (30%), Positives = 85/181 (46%)
Query: 264 VFIWGEC----TGDGIL-GGGIHRSGSYAGVKMDSF---VPKAVESAVVLDVQNIACGGR 315
V +G+C + DG L G G A V DS VP+ + + V V+ ACGG
Sbjct: 294 VATYGDCCLAVSADGSLFGWGNSEYLQLASVT-DSTQVNVPRCLPFSGVGQVKQAACGGT 352
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVEL----VACGEHHT 369
A++ +G VF WG + G+ + V++ + P + L +N E+ + CG H
Sbjct: 353 GCAVLNGEGHVFVWGYGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHF 412
Query: 370 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 429
A+T G+++ WG N G LG G + P ++ P E + V+CG H +VT
Sbjct: 413 AALTDRGELFVWG-KNIR-GCLGIGRLEDQYFPWRVTMPGEPV---DVACGVDH--MVTL 465
Query: 430 A 430
A
Sbjct: 466 A 466
Score = 37 (18.1 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 103 LICKDKDEAEVWFTGLKALISRSHYRKGRAESRSDE 138
L K +D +VW GL +R + ++R E
Sbjct: 127 LSSKTRDVTKVWGMGLNKDSQLGFHRSRKDKTRGYE 162
Score = 37 (18.1 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 314 GRHAALVTKQGEVFSWGEELGGRLG 338
G AA + +F WG G LG
Sbjct: 58 GERAA---RADRIFVWGFSFSGALG 79
>TAIR|locus:2014345 [details] [associations]
symbol:BRX-LIKE3 "AT1G54180" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
EMBL:AC005287 EMBL:AC006577 HOGENOM:HOG000240563 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 EMBL:BT020396 EMBL:BT020515
EMBL:AY735539 EMBL:AY924710 IPI:IPI00534377 IPI:IPI00929932
PIR:A96583 RefSeq:NP_001154422.1 RefSeq:NP_175820.2
UniGene:At.66930 EnsemblPlants:AT1G54180.1 GeneID:841858
KEGG:ath:AT1G54180 TAIR:At1g54180 eggNOG:NOG258623
InParanoid:Q5HZ09 OMA:KFSEMHA Genevestigator:Q5HZ09 Uniprot:Q5HZ09
Length = 370
Score = 196 (74.1 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 40/89 (44%), Positives = 55/89 (61%)
Query: 991 SPSQTEASHCEATTKNKNRTMKAEPAQGD------EWVEQDETGVYITLVALPGGLKDLK 1044
S ++TE S + + ++ + E + + EWVEQDE G+YIT+ ALP G ++L+
Sbjct: 281 SGTKTETSSIDGSARSSSVDRSEEVSVSNASDMESEWVEQDEPGIYITIRALPDGNRELR 340
Query: 1045 RVRFSRKKFSEKQAEQWWAANRARVYQQY 1073
RVRFSR KF E A WW NRAR+ QQY
Sbjct: 341 RVRFSRDKFGETHARLWWEQNRARIQQQY 369
Score = 126 (49.4 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 55/169 (32%), Positives = 74/169 (43%)
Query: 893 TTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRN----SNSFHSSPT 948
+TR+ E V G T + K IKSLT+QLKDMA + GA +N S + + +
Sbjct: 18 STREEDEEHGVIG--TPR---TKQAIKSLTSQLKDMA-VKASGAYKNCKPCSGTTNRNQN 71
Query: 949 PAWDVSSAAIEQPSSPLTFQGAIPXXXXXXXXXXXXDFGDNRSPSQTEASHCEAT-TKNK 1007
+ S AA + ++Q A +G+ S E T T
Sbjct: 72 RNYADSDAASDSGRFHYSYQRA------GTATSTPKIWGNEMESRLKGISSEEGTPTSMS 125
Query: 1008 NRTMKAEPAQGDE---WVEQDETGVYITLVALPGGLKDLKRVRFSRKKF 1053
RT + DE WV Q E GV IT V+LP G DLKR+RF +F
Sbjct: 126 GRTESIVFMEDDEVKEWVAQVEPGVLITFVSLPQGGNDLKRIRFRSTRF 174
Score = 69 (29.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 1050 RKKFSEKQAEQWWAANRARVYQQYNVSMVDKS 1081
R+ F++ QA++WW N +V + YNV +S
Sbjct: 197 REMFNKWQAQKWWVENFEKVMELYNVQFNQQS 228
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 205 (77.2 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 97/350 (27%), Positives = 150/350 (42%)
Query: 266 IWGE-CTGDGILGGGIHRSGS-----YAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 319
+WG D LG HRS Y V S VP ++ V ++CG H+ +
Sbjct: 131 VWGMGLNKDSQLG--FHRSRKDKTRGYEYVLEPSPVPLPLDRPQETRVLQVSCGRAHSLV 188
Query: 320 VTKQGEVFSWGEELGGRLGHGV-DSDV-SHPKLIDALKNINVELV--ACGEHHTCAVTLS 375
+T VFS G G+ G V ++++ S + +++ + ++V ACG+ H+ +T
Sbjct: 189 LTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDQ 248
Query: 376 GDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 434
G++Y+ G G++ GL GH N S P KL G L G++V V+ V++ G LF
Sbjct: 249 GEVYSCGWGADGQTGL-GHYNITST--PTKLGGDLAGVNVVQVATYGDCCLAVSADGGLF 305
Query: 435 TFGDGTFGVLGH-GDRISVSTPREVDSLKGLRTVR-AACGVWHTAAVVEVMVGXXXXXXX 492
+G+ + L D V+ PR + G+ V+ AACG G
Sbjct: 306 GWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGQVKQAACG------------GTGCAVLN 352
Query: 493 XXGKLFTWXXXXXXXXXXXXKEA--RLVPTCVAALVEPN-FCQVS---CGHSLTVALTTT 546
G +F W + A ++P + L E N QVS CG S ALT
Sbjct: 353 GEGHVFVWGYGILGKGPNLLETALPEMIPPTLFGLSEFNPGVQVSRIRCGLSHFAALTNR 412
Query: 547 GHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVL 595
G ++ G + G LG + + P RV ++ACG H+ L
Sbjct: 413 GELFVWGKNIRGCLGIGRLEDQYFPWRVT---MPGEPMDVACGVDHMVTL 459
Score = 195 (73.7 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 74/288 (25%), Positives = 113/288 (39%)
Query: 348 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPKKLN 406
P +D + V V+CG H+ +T +++ G N ++G G E ++
Sbjct: 165 PLPLDRPQETRVLQVSCGRAHSLVLTDGEGVFSMG--NNSYGQCGRKVVENEIYSESHRV 222
Query: 407 GPLEGI--HVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS-LKG 463
++ V V+CG H+ +T G++++ G G G G G STP ++ L G
Sbjct: 223 HRMQDFDGQVVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPTKLGGDLAG 282
Query: 464 LRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARL-VPTCV 522
+ V+ A G G LF W ++ VP C+
Sbjct: 283 VNVVQVAT------------YGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCL 330
Query: 523 AALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKL--TKN 580
Q +CG + L GHV+ G + G+ G LP + L
Sbjct: 331 PFSGVGQVKQAACGGTGCAVLNGEGHVFVWGYGILGK-GPNLLETALPEMIPPTLFGLSE 389
Query: 581 F-----VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 623
F V I CG H A LT+R E++ WGK G LG G +D+ FP
Sbjct: 390 FNPGVQVSRIRCGLSHFAALTNRGELFVWGKNIRGCLGIGRLEDQYFP 437
Score = 175 (66.7 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 72/249 (28%), Positives = 105/249 (42%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHP-KLIDALKNINVELVACG 365
V +ACG H+ +T QGEV+S G G+ G G + S P KL L +NV VA
Sbjct: 232 VVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPTKLGGDLAGVNVVQVATY 291
Query: 366 EHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGI-HVSSVSCGPWHT 424
AV+ G ++ WG S L + + +P+ L P G+ V +CG
Sbjct: 292 GDCCLAVSADGGLFGWGNSEY-LQLASVTDSTQVNVPRCL--PFSGVGQVKQAACGGTGC 348
Query: 425 AVVTSAGQLFTFGDGTFGVLGHGDRI-SVSTPREVD-SLKGL-------RTVRAACGVWH 475
AV+ G +F +G +G+LG G + + P + +L GL + R CG+ H
Sbjct: 349 AVLNGEGHVFVWG---YGILGKGPNLLETALPEMIPPTLFGLSEFNPGVQVSRIRCGLSH 405
Query: 476 TAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSC 535
AA+ G+LF W E + P V EP V+C
Sbjct: 406 FAALTN------------RGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEP--MDVAC 451
Query: 536 G--HSLTVA 542
G H +T+A
Sbjct: 452 GVDHMVTLA 460
Score = 137 (53.3 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 57/184 (30%), Positives = 84/184 (45%)
Query: 264 VFIWGEC----TGDG-ILGGGIHRSGSYAGVKMDSF---VPKAVESAVVLDVQNIACGGR 315
V +G+C + DG + G G A V DS VP+ + + V V+ ACGG
Sbjct: 288 VATYGDCCLAVSADGGLFGWGNSEYLQLASVT-DSTQVNVPRCLPFSGVGQVKQAACGGT 346
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVDS-DVSHPKLID----ALKNIN----VELVACGE 366
A++ +G VF WG G LG G + + + P++I L N V + CG
Sbjct: 347 GCAVLNGEGHVFVWGY---GILGKGPNLLETALPEMIPPTLFGLSEFNPGVQVSRIRCGL 403
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 426
H A+T G+++ WG N G LG G + P ++ P E + V+CG H +
Sbjct: 404 SHFAALTNRGELFVWG-KNIR-GCLGIGRLEDQYFPWRVTMPGEPM---DVACGVDH--M 456
Query: 427 VTSA 430
VT A
Sbjct: 457 VTLA 460
Score = 41 (19.5 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 321 TKQGEVFSWGEELGGRLG 338
T+ +F WG G LG
Sbjct: 56 TRADRIFVWGFSFSGALG 73
Score = 39 (18.8 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 103 LICKDKDEAEVWFTGLKALISRSHYRKGRAESRSDE 138
L K KD +VW GL +R + ++R E
Sbjct: 121 LSSKTKDITKVWGMGLNKDSQLGFHRSRKDKTRGYE 156
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 155 (59.6 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 40/126 (31%), Positives = 64/126 (50%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLG-HGVDSDVSHPKLIDALKN-------IN 358
V +++ G H + VT+ G V WGE G+ G G D V P + + + +
Sbjct: 82 VISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDR-VPSPTPVTVVDDETHPPQLVR 140
Query: 359 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVS 418
V VACG HT A++ +++ WG S C GL+ N +W P+K+ L G +V ++
Sbjct: 141 VLNVACGAQHTLALSNKHEVWAWG-SGCQLGLVT--NVFPVWKPQKVEH-LVGRYVVQIA 196
Query: 419 CGPWHT 424
CG +H+
Sbjct: 197 CGAFHS 202
Score = 136 (52.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 36/103 (34%), Positives = 51/103 (49%)
Query: 325 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 384
EV+SWG+ G+LGHG P I +L V + G +H+ A+T +Y+WG
Sbjct: 521 EVWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSE 580
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV 427
FG LG N S +P L +GI V V+ G HT ++
Sbjct: 581 K--FGQLGRMNSPST-VPN-LTTVSDGIRVWDVAAGQTHTLLL 619
Score = 111 (44.1 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 599 TEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAI---C-LHKWVS 654
TEV++WGKG G+LGHGD R P +++L K+V I G + + A+ C ++ W S
Sbjct: 520 TEVWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGS 579
Score = 108 (43.1 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 30/82 (36%), Positives = 41/82 (50%)
Query: 405 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG-HG-DRISVSTPREV--DS 460
L L G HV SVS G +H + VT G + +G+ ++G G G DR+ TP V D
Sbjct: 73 LESTLSGQHVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDE 132
Query: 461 LKG---LRTVRAACGVWHTAAV 479
+R + ACG HT A+
Sbjct: 133 THPPQLVRVLNVACGAQHTLAL 154
Score = 97 (39.2 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 33/111 (29%), Positives = 52/111 (46%)
Query: 264 VFIWGECTGDGILG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTK 322
V +WGE G G G R S V + V ++ V N+ACG +H ++
Sbjct: 101 VLMWGE-NSYGQCGVSGTDRVPSPTPVTV---VDDETHPPQLVRVLNVACGAQHTLALSN 156
Query: 323 QGEVFSWGEELGGRLGHGVDS-DVSHPKLIDALKNINVELVACGEHHTCAV 372
+ EV++WG G +LG + V P+ ++ L V +ACG H+ A+
Sbjct: 157 KHEVWAWGS--GCQLGLVTNVFPVWKPQKVEHLVGRYVVQIACGAFHSLAL 205
Score = 95 (38.5 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 516 RLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLP--TRV 573
RL P C+ +L + +++ G + ++ALT VY+ GS +GQLG + +P T V
Sbjct: 541 RLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSEKFGQLGRMNSPSTVPNLTTV 600
Query: 574 EGKLTKNFVEEIACGDYHVAVL 595
+ V ++A G H +L
Sbjct: 601 SDGIR---VWDVAAGQTHTLLL 619
Score = 91 (37.1 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 27/96 (28%), Positives = 43/96 (44%)
Query: 549 VYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGA 608
V++ G GQLG +L L+K V +I G H LT++ +VY+WG
Sbjct: 522 VWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSEK 581
Query: 609 NGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 644
G+LG ++ P+L +V + G + T
Sbjct: 582 FGQLGRMNSPS-TVPNLTTVSDGIRVWDVAAGQTHT 616
Score = 75 (31.5 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 44/190 (23%), Positives = 74/190 (38%)
Query: 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 473
V + G H ++ GQ+++FG+ + + + S E +L G + + G
Sbjct: 34 VLHAALGSLHGLLLIEGGQVYSFGEQPWKPV---EPPPASLVLE-STLSGQHVISVSAGS 89
Query: 474 WHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVE----PN 529
+H +AV E G + W + PT V + + P
Sbjct: 90 YHCSAVTE------------DGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQ 137
Query: 530 FCQV---SCGHSLTVALTTTGHVYTMGSPVY-GQLGDPKANGKLPTRVEGKLTKNFVEEI 585
+V +CG T+AL+ V+ GS G + + K P +VE L +V +I
Sbjct: 138 LVRVLNVACGAQHTLALSNKHEVWAWGSGCQLGLVTNVFPVWK-PQKVE-HLVGRYVVQI 195
Query: 586 ACGDYHVAVL 595
ACG +H L
Sbjct: 196 ACGAFHSLAL 205
Score = 44 (20.5 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 939 NSNSFHSSPTPAWDVSSAAIEQP 961
NS++ +P W VSS+++ P
Sbjct: 1402 NSSTHSEAPQQGWTVSSSSLLLP 1424
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 201 (75.8 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 84/322 (26%), Positives = 136/322 (42%)
Query: 302 AVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG-HGVDSDVSHPKLIDALKNINVE 360
AV++DV A H +V + G ++WGE G+LG +++ +P +++++N +V
Sbjct: 452 AVIVDV---AMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESVRNYHVV 508
Query: 361 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCG 420
G+ T VT +G + + G SN + L G + + PK L L + V V+ G
Sbjct: 509 SACAGDGFTILVTQAGSLLSCG-SNAHLAL-GQDEQRNYHSPK-LIARLADVRVEQVAAG 565
Query: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGD-RISVSTPREVDSLKGLRTV--RAACGVWHTA 477
H ++ G ++ +G T G LG G+ + P+++ L ++T + CG T+
Sbjct: 566 LQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKI-LLSHVKTKPSKIYCGP-DTS 623
Query: 478 AVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGH 537
AV+ KL K+ +L A C S H
Sbjct: 624 AVLFANGELHVCGSNDYNKL----GFQRSAKITAFKKVQLPHKVTQA------C-FSSTH 672
Query: 538 SLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHVAVLT 596
S V L G+VYTMG GQ G N PT V+ + ++ + C D V +
Sbjct: 673 S--VFLVEGGYVYTMGRNAEGQRGIRHCNSVDHPTLVDS-VKSRYIVKANCSDQCTIVAS 729
Query: 597 SRTEVYTWGKGANGRLGHGDTD 618
+ WG NG G G T+
Sbjct: 730 EDNIITVWGT-RNGLPGIGSTN 750
Score = 184 (69.8 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 57/206 (27%), Positives = 86/206 (41%)
Query: 277 GGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGR 336
G G H ++ P +ES V + G LVT+ G + S G
Sbjct: 477 GEGTHGQLGLTALEAWKHYPSRMESVRNYHVVSACAGDGFTILVTQAGSLLSCGSNAHLA 536
Query: 337 LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN- 395
LG + PKLI L ++ VE VA G H A++ G +Y WG S C G LG GN
Sbjct: 537 LGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLALSREGAVYVWGTSTC--GALGLGNY 594
Query: 396 EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 455
+ P+K+ S + CGP +AV+ + G+L G + LG ++
Sbjct: 595 QQQQKFPQKILLSHVKTKPSKIYCGPDTSAVLFANGELHVCGSNDYNKLGFQRSAKITAF 654
Query: 456 REVDSLKGLRTVRAACGVWHTAAVVE 481
++V + +A H+ +VE
Sbjct: 655 KKVQLPH--KVTQACFSSTHSVFLVE 678
Score = 183 (69.5 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 64/289 (22%), Positives = 113/289 (39%)
Query: 362 VACGEHHTCAVTLSGDMYTWG-GSNCNFGLLGHGNEMSLW--LPKKLNGPLEGIHVSSVS 418
VA + H V G Y WG G++ GL + W P ++ + HV S
Sbjct: 457 VAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTA----LEAWKHYPSRMES-VRNYHVVSAC 511
Query: 419 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA 478
G T +VT AG L + G LG ++ + +P+ + L +R + A G+ H A
Sbjct: 512 AGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLA 571
Query: 479 VVEVMVGXXXXXXXXXGKLFTWXXXX--XXXXXXXXKEARLVPTCVAALVEPNFCQVSCG 536
+ G ++ W ++ + + + V+ ++ CG
Sbjct: 572 L------------SREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSKIYCG 619
Query: 537 HSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIAC-GDYHVAVL 595
+ L G ++ GS Y +LG ++ K+ + +L + AC H L
Sbjct: 620 PDTSAVLFANGELHVCGSNDYNKLGFQRS-AKITAFKKVQLPHKVTQ--ACFSSTHSVFL 676
Query: 596 TSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFT 644
VYT G+ A G+ G + + P+LV+++K + + C T
Sbjct: 677 VEGGYVYTMGRNAEGQRGIRHCNSVDHPTLVDSVKSRYIVKANCSDQCT 725
Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
Identities = 46/177 (25%), Positives = 72/177 (40%)
Query: 477 AAVVEV-MVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEA-RLVPTCVAALVEPNFCQVS 534
A +V+V M G + W EA + P+ + ++ +
Sbjct: 452 AVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESVRNYHVVSAC 511
Query: 535 CGHSLTVALTTTGHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVA 593
G T+ +T G + + GS + LG D + N P + +L VE++A G HV
Sbjct: 512 AGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLI-ARLADVRVEQVAAGLQHVL 570
Query: 594 VLTSRTEVYTWGKGANGRLGHGD-TDDRNFPS--LVEALKDKQVKSIVCGTSFTAAI 647
L+ VY WG G LG G+ + FP L+ +K K K I CG +A +
Sbjct: 571 ALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSK-IYCGPDTSAVL 626
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 203 (76.5 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 93/350 (26%), Positives = 152/350 (43%)
Query: 266 IWGE-CTGDGILGGGIHRSGS-----YAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 319
+WG D LG HRS Y V S VP ++ V ++CG H+ +
Sbjct: 132 VWGMGLNKDSQLG--FHRSHKDKTRGYEYVLEPSPVPLPLDRPQETRVLQVSCGRAHSLI 189
Query: 320 VTKQGEVFSWGEELGGRLGHGV-DSDV-SHPKLIDALKNINVELV--ACGEHHTCAVTLS 375
+T VFS G G+ G V ++++ S ++ +++ + ++V CG+ H+ +T
Sbjct: 190 LTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVNRMQDFDGQVVQVVCGQDHSLFLTDK 249
Query: 376 GDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 434
G++Y+ G G++ GL GH + S+ P KL G L G++V V+ V++ G LF
Sbjct: 250 GEVYSCGWGADGQTGL-GHYDITSV--PTKLGGDLAGVNVVQVATYGDCCLAVSAEGGLF 306
Query: 435 TFGDGTFGVLGH-GDRISVSTPREVDSLKGLRTVR-AACGVWHTAAVVEVMVGXXXXXXX 492
+G+ + L D V+ PR + G+ V+ AACG G
Sbjct: 307 GWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVKQAACG------------GTGCAVLN 353
Query: 493 XXGKLFTWXXXXXXXXXXXXKEA--RLVPTCVAALVEPN----FCQVSCGHSLTVALTTT 546
G +F W + A ++P + L E N + CG S ALT+
Sbjct: 354 GEGHVFVWGYGILGKGPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLSHFAALTSK 413
Query: 547 GHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVL 595
G ++ G + G LG + + P RV + V+ +ACG H+ L
Sbjct: 414 GELFVWGKNIRGCLGIGRLEDQYFPWRVT--MPGEPVD-VACGVDHMVTL 460
Score = 198 (74.8 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 97/363 (26%), Positives = 143/363 (39%)
Query: 307 VQNIACGGRHAALVTKQGEVFS-WGEELG--GRLG-HGVDSDVSH-----------PKLI 351
+ + ACG L +K +V WG L +LG H D + P +
Sbjct: 110 ISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSHKDKTRGYEYVLEPSPVPLPL 169
Query: 352 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPK-KLNG-- 407
D + V V+CG H+ +T +++ G N +G G E ++ K+N
Sbjct: 170 DRPQETRVLQVSCGRAHSLILTDCEGVFSMG--NNAYGQCGRNVVENEIYSESHKVNRMQ 227
Query: 408 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSLKGL 464
+G V V CG H+ +T G++++ G DG G LGH D SV T D L G+
Sbjct: 228 DFDG-QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTG-LGHYDITSVPTKLGGD-LAGV 284
Query: 465 RTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARL-VPTCVA 523
V+ A G G LF W ++ VP C+
Sbjct: 285 NVVQVAT------------YGDCCLAVSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCLP 332
Query: 524 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ---LGDPKANGKLPTRVEGKLTKN 580
Q +CG + L GHV+ G + G+ L + +P + G N
Sbjct: 333 FSGVGKVKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVETAFPEVIPPTLFGLTEFN 392
Query: 581 ---FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 637
V I CG H A LTS+ E++ WGK G LG G +D+ FP V + + V +
Sbjct: 393 PGVHVSHIWCGLSHFAALTSKGELFVWGKNIRGCLGIGRLEDQYFPWRV-TMPGEPV-DV 450
Query: 638 VCG 640
CG
Sbjct: 451 ACG 453
Score = 138 (53.6 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 43/142 (30%), Positives = 70/142 (49%)
Query: 295 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS---DVSHPKLI 351
VP+ + + V V+ ACGG A++ +G VF WG + G+ + V++ +V P L
Sbjct: 327 VPRCLPFSGVGKVKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVETAFPEVIPPTLF 386
Query: 352 DALK---NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGP 408
+ ++V + CG H A+T G+++ WG N G LG G + P ++ P
Sbjct: 387 GLTEFNPGVHVSHIWCGLSHFAALTSKGELFVWG-KNIR-GCLGIGRLEDQYFPWRVTMP 444
Query: 409 LEGIHVSSVSCGPWHTAVVTSA 430
E + V+CG H +VT A
Sbjct: 445 GEPV---DVACGVDH--MVTLA 461
Score = 40 (19.1 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 103 LICKDKDEAEVWFTGLKALISRSHYRKGRAESRSDE 138
L K KD +VW GL +R + ++R E
Sbjct: 122 LSSKTKDVTKVWGMGLNKDSQLGFHRSHKDKTRGYE 157
Score = 38 (18.4 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 314 GRHAALVTKQGEVFSWGEELGGRLG 338
G AA + VF WG G LG
Sbjct: 53 GERAA---RADRVFVWGFSFSGALG 74
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 202 (76.2 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 93/350 (26%), Positives = 145/350 (41%)
Query: 266 IWGE-CTGDGILGGGIHRSGS-----YAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 319
+WG D LG HRS Y V S VP ++ V ++CG H+ +
Sbjct: 128 VWGMGLNKDSQLG--FHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLV 185
Query: 320 VTKQGEVFSWGEELGGRLGHGVDSD--VSHPKLIDALKNINVELV--ACGEHHTCAVTLS 375
+T + VFS G G+ G V D S + +++ ++V CG+ H+ +T
Sbjct: 186 LTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEGQVVQVVCGQDHSLFLTDK 245
Query: 376 GDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 434
G++Y+ G G++ GL GH N S P KL G L G+ V V+ +++ G +F
Sbjct: 246 GEVYSCGWGADGQTGL-GHYNITST--PSKLGGDLAGVTVVQVATYGDCCLALSADGGVF 302
Query: 435 TFGDGTFGVLGH-GDRISVSTPREVDSLKGLRTVR-AACGVWHTAAVVEVMVGXXXXXXX 492
+G+ + L D V+ PR + G+ V+ ACG G
Sbjct: 303 GWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVKQVACG------------GTGCAILN 349
Query: 493 XXGKLFTWXXXXXXXXXXXXKEA--RLVPTCVAALVEPN----FCQVSCGHSLTVALTTT 546
G +F W + A ++P + L E N Q+ CG S ALT
Sbjct: 350 EEGHVFVWGYGILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGLSHFAALTNK 409
Query: 547 GHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVL 595
G ++ G + G LG + + P RV + V+ +ACG H+ L
Sbjct: 410 GELFVWGKNIRGCLGIGRLEDQYFPWRVT--MPGEPVD-VACGVDHMVTL 456
Score = 192 (72.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 92/361 (25%), Positives = 144/361 (39%)
Query: 307 VQNIACGGRHAALVTKQGEVFS-WGEELG--GRLG-HGVDSDVSH-----------PKLI 351
+ + ACG L +K +V WG L +LG H D + P +
Sbjct: 106 ISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPL 165
Query: 352 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPK-KLNG-- 407
D + V V+CG H+ +T +++ G +N + G G E ++ K++
Sbjct: 166 DRPQETKVLQVSCGRAHSLVLTDREGVFSMG-NNAH-GQCGRKVVEDEVYSESHKVHRMQ 223
Query: 408 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS-LKGLRT 466
EG V V CG H+ +T G++++ G G G G G STP ++ L G+
Sbjct: 224 DFEG-QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTV 282
Query: 467 VRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARL-VPTCVAAL 525
V+ A G G +F W ++ VP C+
Sbjct: 283 VQVAT------------YGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFS 330
Query: 526 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ---LGDPKANGKLPTRVEGKLTKN-- 580
QV+CG + L GHV+ G + G+ L + +P + G N
Sbjct: 331 GVGKVKQVACGGTGCAILNEEGHVFVWGYGILGKGPNLSETALPEMIPPTLFGLTEFNPE 390
Query: 581 -FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVC 639
V +I CG H A LT++ E++ WGK G LG G +D+ FP V + + V + C
Sbjct: 391 VKVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRV-TMPGEPV-DVAC 448
Query: 640 G 640
G
Sbjct: 449 G 449
Score = 155 (59.6 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 58/184 (31%), Positives = 88/184 (47%)
Query: 264 VFIWGEC----TGDG-ILGGGIHRSGSYAGVKMDSF---VPKAVESAVVLDVQNIACGGR 315
V +G+C + DG + G G A V DS VP+ + + V V+ +ACGG
Sbjct: 285 VATYGDCCLALSADGGVFGWGNSEYLQLASVT-DSTQVNVPRCLPFSGVGKVKQVACGGT 343
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLID----ALKNINVEL----VACGE 366
A++ ++G VF WG G LG G + S+ + P++I L N E+ + CG
Sbjct: 344 GCAILNEEGHVFVWGY---GILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGL 400
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAV 426
H A+T G+++ WG N G LG G + P ++ P E + V+CG H +
Sbjct: 401 SHFAALTNKGELFVWG-KNIR-GCLGIGRLEDQYFPWRVTMPGEPV---DVACGVDH--M 453
Query: 427 VTSA 430
VT A
Sbjct: 454 VTLA 457
Score = 40 (19.1 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 103 LICKDKDEAEVWFTGLKALISRSHYRKGRAESRSDE 138
L K KD +VW GL +R + ++R E
Sbjct: 118 LSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYE 153
Score = 38 (18.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 314 GRHAALVTKQGEVFSWGEELGGRLG 338
G AA + VF WG G LG
Sbjct: 49 GERAA---RADRVFVWGFSFSGALG 70
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 202 (76.2 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 93/350 (26%), Positives = 146/350 (41%)
Query: 266 IWGE-CTGDGILGGGIHRSGS-----YAGVKMDSFVPKAVESAVVLDVQNIACGGRHAAL 319
+WG D LG HRS Y V S VP ++ V ++CG H+ +
Sbjct: 128 VWGMGLNKDSQLG--FHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLV 185
Query: 320 VTKQGEVFSWGEELGGRLGHGVDSD--VSHPKLIDALKNINVELV--ACGEHHTCAVTLS 375
+T + VFS G G+ G V D S + +++ + ++V CG+ H+ +T
Sbjct: 186 LTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVCGQDHSLFLTDK 245
Query: 376 GDMYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF 434
G++Y+ G G++ GL GH N S P KL G L G+ V V+ +++ G +F
Sbjct: 246 GEVYSCGWGADGQTGL-GHYNITST--PSKLGGDLAGVTVVQVATYGDCCLALSADGGVF 302
Query: 435 TFGDGTFGVLGH-GDRISVSTPREVDSLKGLRTVR-AACGVWHTAAVVEVMVGXXXXXXX 492
+G+ + L D V+ PR + G+ V+ ACG G
Sbjct: 303 GWGNSEYLQLASVTDSTQVNVPRCLP-FSGVGKVKQVACG------------GTGCAVLN 349
Query: 493 XXGKLFTWXXXXXXXXXXXXKEA--RLVPTCVAALVEPN----FCQVSCGHSLTVALTTT 546
G +F W + A ++P + L E N Q+ CG S ALT
Sbjct: 350 AEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNK 409
Query: 547 GHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYHVAVL 595
G ++ G + G LG + + P RV + V+ +ACG H+ L
Sbjct: 410 GELFVWGKNIRGCLGIGRLEDQYFPWRVT--MPGEPVD-VACGVDHMVTL 456
Score = 191 (72.3 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 95/364 (26%), Positives = 144/364 (39%)
Query: 307 VQNIACGGRHAALVTKQGEVFS-WGEELG--GRLG-HGVDSDVSH-----------PKLI 351
+ + ACG L +K +V WG L +LG H D + P +
Sbjct: 106 ISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPL 165
Query: 352 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPK-KLNG-- 407
D + V V+CG H+ +T +++ G N + G G E ++ K++
Sbjct: 166 DRPQETKVLQVSCGRAHSLVLTDREGVFSMG--NNSHGQCGRKVVEDEVYSESHKVHRMQ 223
Query: 408 PLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDS-LKGLRT 466
+G V V CG H+ +T G++++ G G G G G STP ++ L G+
Sbjct: 224 DFDG-QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTV 282
Query: 467 VRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARL-VPTCVAAL 525
V+ A G G +F W ++ VP C+
Sbjct: 283 VQVAT------------YGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFS 330
Query: 526 VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGD-PKA-NGKLPTRVEGKL--TKNF 581
QV+CG + L GHV+ G YG LG PK +P + L F
Sbjct: 331 GVGKVKQVACGGTGCAVLNAEGHVFVWG---YGILGKGPKLLETAIPEMIPPTLFGLTEF 387
Query: 582 -----VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKS 636
V +I CG H A LT++ E++ WGK G LG G +D+ FP V + + V
Sbjct: 388 NPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRV-TMPGEPV-D 445
Query: 637 IVCG 640
+ CG
Sbjct: 446 VACG 449
Score = 145 (56.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 53/181 (29%), Positives = 84/181 (46%)
Query: 264 VFIWGEC----TGDG-ILGGGIHRSGSYAGVKMDSF---VPKAVESAVVLDVQNIACGGR 315
V +G+C + DG + G G A V DS VP+ + + V V+ +ACGG
Sbjct: 285 VATYGDCCLALSADGGVFGWGNSEYLQLASVT-DSTQVNVPRCLPFSGVGKVKQVACGGT 343
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVDSDVSH--PKLIDALKNINVEL----VACGEHHT 369
A++ +G VF WG + G+ +++ + P + L N E+ + CG H
Sbjct: 344 GCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHF 403
Query: 370 CAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTS 429
A+T G+++ WG N G LG G + P ++ P E + V+CG H +VT
Sbjct: 404 AALTNKGELFVWG-KNIR-GCLGIGRLEDQYFPWRVTMPGEPV---DVACGVDH--MVTL 456
Query: 430 A 430
A
Sbjct: 457 A 457
Score = 40 (19.1 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 103 LICKDKDEAEVWFTGLKALISRSHYRKGRAESRSDE 138
L K KD +VW GL +R + ++R E
Sbjct: 118 LSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYE 153
Score = 38 (18.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 314 GRHAALVTKQGEVFSWGEELGGRLG 338
G AA + VF WG G LG
Sbjct: 49 GERAA---RADRVFVWGFSFSGALG 70
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 174 (66.3 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 73/309 (23%), Positives = 126/309 (40%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWG--EELGGRLGHGVDSDV-SHPKLIDALKNINVELVA 363
+ +A G + +T +G+V+ WG G LG + V + PKL+ LK I LV
Sbjct: 233 IVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPKLLPDLKKIK-HLV- 290
Query: 364 CGEHHTCAVTLSGDMYTWGGSNCN-FGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 421
CG++H A+ G + +WG N G + N+++ P++ P +H+ + G
Sbjct: 291 CGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGLPKGIVHIGA---GA 347
Query: 422 WHTAVVTSAGQLFTFGDGTFGVLG----HGD-RISVSTPREVDSLKGLRTVRAACGVWHT 476
+H+ V +G++F +G +FG G GD ++ P VDSL + G H+
Sbjct: 348 FHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNVTQICGGAHHS 407
Query: 477 AAVV---EVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQV 533
A E +V K+ T + PT V + V
Sbjct: 408 IAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIKDERDRPRILIEPTAVPGIKAK---AV 464
Query: 534 SCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG-KLPTRVEGKLTKNFVEEIACGDYHV 592
+ G ++A+ T+G ++ G Q G + ++ T +E + A G
Sbjct: 465 AAGSDHSIAIDTSGRPWSWGFSATYQTGQGTQDDVEVATVIENTAVRGKSLNWAGGGGQF 524
Query: 593 AVLTSRTEV 601
+V T E+
Sbjct: 525 SVFTEPVEL 533
Score = 158 (60.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 78/311 (25%), Positives = 124/311 (39%)
Query: 362 VACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGP 421
VA G+ + A+T G +Y WG N G+LG + + KL L+ I + CG
Sbjct: 236 VAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPKLLPDLKKI--KHLVCGD 293
Query: 422 WHTAVVTSAGQLFTFGDGTFGVLGHG----DRISVSTPREVDSLKGLRTVRAACGVWHTA 477
H + G + ++G G LG ++++ PRE KG+ V G +H+
Sbjct: 294 NHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGLPKGI--VHIGAGAFHSF 351
Query: 478 AVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXX----XXXKEARLV-PTCVAALVEPNFCQ 532
AV + GK+F W EA +V PT V +L + N Q
Sbjct: 352 AVHQ------------SGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNVTQ 399
Query: 533 VSCGHSLTVALTTTGHVYTMGS-------------PVYGQLGDPKANGKL---PTRVEGK 576
+ G ++A T G G P + D + ++ PT V G
Sbjct: 400 ICGGAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIKDERDRPRILIEPTAVPGI 459
Query: 577 LTKNFVEEIACG-DYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVE--ALKDKQ 633
K +A G D+ +A+ TS ++WG A + G G DD +++E A++ K
Sbjct: 460 KAK----AVAAGSDHSIAIDTSGRP-WSWGFSATYQTGQGTQDDVEVATVIENTAVRGKS 514
Query: 634 VKSIVCGTSFT 644
+ G F+
Sbjct: 515 LNWAGGGGQFS 525
Score = 146 (56.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 48/190 (25%), Positives = 88/190 (46%)
Query: 290 KMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG---HGVDSDVS 346
K++ P+ E + + +I G H+ V + G+VF+WG G G + DS+ +
Sbjct: 325 KLNGLQPR--EFGLPKGIVHIGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAA 382
Query: 347 --HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG---GSNCNFGLLGHGNEMSLW- 400
HP ++D+L NV + G HH+ A T G+ WG G + ++ +
Sbjct: 383 IVHPTVVDSLSKKNVTQICGGAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIKD 442
Query: 401 ---LPKKLNGP--LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG--DRISVS 453
P+ L P + GI +V+ G H+ + ++G+ +++G G G D + V+
Sbjct: 443 ERDRPRILIEPTAVPGIKAKAVAAGSDHSIAIDTSGRPWSWGFSATYQTGQGTQDDVEVA 502
Query: 454 TPREVDSLKG 463
T E +++G
Sbjct: 503 TVIENTAVRG 512
Score = 111 (44.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 32/101 (31%), Positives = 48/101 (47%)
Query: 519 PTCVAALVEPN---FCQVSCGHSLTVALTTTGHVYTMGS--PVYGQLG-DPKANGKLPTR 572
PT + + P+ +V+ G S + ALT G VY G+ G LG D K + +
Sbjct: 219 PTAIPSSAFPHGTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPK 278
Query: 573 VEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 613
+ L K ++ + CGD HV L + V +WG G +LG
Sbjct: 279 LLPDLKK--IKHLVCGDNHVLALNDKGAVLSWGSGQQNQLG 317
Score = 76 (31.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 24/67 (35%), Positives = 31/67 (46%)
Query: 321 TKQGEVFSWGEELGGRLGHGVDS---DVSHPKLIDAL--KNINVELVACGEHHTCAVTLS 375
T + V+ GE G LG GV DV P+L L ++ V VA G H A+T
Sbjct: 107 TAKLNVYVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGVVQVAVGGMHCVALTHD 166
Query: 376 GDMYTWG 382
+ TWG
Sbjct: 167 NKVLTWG 173
Score = 72 (30.4 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 23/75 (30%), Positives = 34/75 (45%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V++ GE + G LG G+ ++ VK P + V V +A GG H +T
Sbjct: 112 VYVCGEGSS-GELGLGVGKN--VIDVKRPRLNPHLLPDDV--GVVQVAVGGMHCVALTHD 166
Query: 324 GEVFSWGEELGGRLG 338
+V +WG G LG
Sbjct: 167 NKVLTWGVNDQGALG 181
Score = 59 (25.8 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 371 AVTLSGDMYTWG-GSNCNFGLLGHG-NEMSLWLPKKLNGPL--EGIHVSSVSCGPWHTAV 426
A T ++Y G GS+ GL G G N + + P+ LN L + + V V+ G H
Sbjct: 105 APTAKLNVYVCGEGSSGELGL-GVGKNVIDVKRPR-LNPHLLPDDVGVVQVAVGGMHCVA 162
Query: 427 VTSAGQLFTFGDGTFGVLG 445
+T ++ T+G G LG
Sbjct: 163 LTHDNKVLTWGVNDQGALG 181
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 195 (73.7 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 92/350 (26%), Positives = 142/350 (40%)
Query: 266 IWGE-CTGDGILG--GGIH-RSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 321
+WG D LG I R+ Y V S +P +E V ++CG H+ ++T
Sbjct: 122 VWGMGLNKDSQLGFQRSIRDRTKGYEYVLEPSPIPLPLEKPQKTRVLQVSCGRAHSLVLT 181
Query: 322 KQGEVFSWGEELGGRLGHGVDSD--VSHPKLIDALKNIN--VELVACGEHHTCAVTLSGD 377
VF+ G G+ G V D S LI L + + V V CG+ H+ T G
Sbjct: 182 DSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFDSRVVQVVCGQDHSLFRTKKGA 241
Query: 378 MYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
++ G G++ GL GH N S+ P KL G + G+++ VS V+ G LF +
Sbjct: 242 VFACGWGADGQTGL-GHYNITSV--PTKLGGDIAGVNIVQVSSYGDCCLAVSDEGDLFGW 298
Query: 437 GDGTFGVLGH-GDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXG 495
G+ + L + V+ PR + G + AACG G G
Sbjct: 299 GNSEYLQLASVTETTQVNVPRHLPFKIG-KIKEAACG------------GTGNIVLTEEG 345
Query: 496 KLFTWXXXXXXXXXXXXKEA--RLVPTCVAALVE----PNFCQVSCGHSLTVALTTTGHV 549
+F W + A ++P + + +V CG S ALT G +
Sbjct: 346 AVFVWGYGILGKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLSHFAALTNRGEL 405
Query: 550 YTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACG-DYHVAVLTS 597
+ G + G LG + + P RV V ++ACG D+ V+++ S
Sbjct: 406 FVWGKNLRGCLGIGRMEDQYFPWRVT---IPGEVVDVACGVDHMVSMVKS 452
Score = 175 (66.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 79/307 (25%), Positives = 121/307 (39%)
Query: 348 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN-EMSLWLPKKLN 406
P ++ + V V+CG H+ +T S ++T G N ++G G E ++ L
Sbjct: 156 PLPLEKPQKTRVLQVSCGRAHSLVLTDSEGVFTMG--NNSYGQCGRKVVEDEIYSESHLI 213
Query: 407 GPLEGI--HVSSVSCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRISVSTPREVDSL 461
L V V CG H+ T G +F G DG G LGH + SV T D +
Sbjct: 214 HQLNDFDSRVVQVVCGQDHSLFRTKKGAVFACGWGADGQTG-LGHYNITSVPTKLGGD-I 271
Query: 462 KGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARL-VPT 520
G+ V+ + G G LF W + ++ VP
Sbjct: 272 AGVNIVQVSS------------YGDCCLAVSDEGDLFGWGNSEYLQLASVTETTQVNVPR 319
Query: 521 CVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLT-- 578
+ + + +CG + + LT G V+ G + G+ G +P + L
Sbjct: 320 HLPFKIG-KIKEAACGGTGNIVLTEEGAVFVWGYGILGK-GPNLTETAVPEMIPPSLFGW 377
Query: 579 KNF-----VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 633
+F V + CG H A LT+R E++ WGK G LG G +D+ FP V +
Sbjct: 378 SDFSSDVRVARVRCGLSHFAALTNRGELFVWGKNLRGCLGIGRMEDQYFPWRVTI--PGE 435
Query: 634 VKSIVCG 640
V + CG
Sbjct: 436 VVDVACG 442
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 213 (80.0 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 49/137 (35%), Positives = 72/137 (52%)
Query: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
+G VF WG G+LG + D P + L+ V ++CGE HT +T SG ++T+G
Sbjct: 23 EGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 82
Query: 383 GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHT-AVVTSAGQLFTFGDGTF 441
+C G LGH + P+++ L G V+ ++CG HT A V S+G ++ FG G
Sbjct: 83 AGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAK 139
Query: 442 GVLGHGDRISVSTPREV 458
G LG G +V P V
Sbjct: 140 GQLGTGHTCNVKCPSPV 156
Score = 166 (63.5 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 47/135 (34%), Positives = 65/135 (48%)
Query: 495 GKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS 554
G +F W +E R P V L +SCG T LT +G V+T G+
Sbjct: 24 GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 83
Query: 555 PVYGQLGDPKANGKL-PTRVEGKLTKNFVEEIACGDYH-VAVLTSRTEVYTWGKGANGRL 612
GQLG N ++ P RV +L + V +IACG H +A + S +Y +G GA G+L
Sbjct: 84 GSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQL 142
Query: 613 GHGDTDDRNFPSLVE 627
G G T + PS V+
Sbjct: 143 GTGHTCNVKCPSPVK 157
Score = 160 (61.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 52/170 (30%), Positives = 78/170 (45%)
Query: 275 ILGGGIHRSGSYA-GVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL 333
+ G G++ +G + D P V+ V I+CG H A++TK G VF++G
Sbjct: 26 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 85
Query: 334 GGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCA-VTLSGDMYTWGGSNCNF-GLL 391
G+LGH +D +P+ + L V +ACG HT A V SG +Y +G C G L
Sbjct: 86 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG---CGAKGQL 142
Query: 392 GHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G G+ ++ P + G H +S Q+F+ GD TF
Sbjct: 143 GTGHTCNVKCPSPVKG-YWAAHSGQLSARA-DRFKYHIVKQIFSGGDQTF 190
Score = 156 (60.0 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 41/105 (39%), Positives = 52/105 (49%)
Query: 376 GDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
G ++ WG +N G LG +E P + L V +SCG HTAV+T +G +FT
Sbjct: 24 GAVFGWGMNNA--GQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFT 80
Query: 436 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVV 480
FG G+ G LGH PR V L G + ACG HT A V
Sbjct: 81 FGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 125
Score = 138 (53.6 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 37/101 (36%), Positives = 51/101 (50%)
Query: 547 GHVYTMGSPVYGQLG-DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWG 605
G V+ G GQLG + + + P V+ T+ V I+CG+ H AVLT V+T+G
Sbjct: 24 GAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVY-ISCGEEHTAVLTKSGGVFTFG 82
Query: 606 KGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAA 646
G+ G+LGH +D P V L +V I CG T A
Sbjct: 83 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLA 123
Score = 37 (18.1 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 7/39 (17%), Positives = 15/39 (38%)
Query: 626 VEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGC 664
V KD + + + ++ I +H+W + C
Sbjct: 694 VTVCKDNRQEFVDAYVNYVFQISVHEWYTAFSSGFLKVC 732
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 210 (79.0 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 54/162 (33%), Positives = 83/162 (51%)
Query: 321 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV---ELVACGEHHTCAVTLSGD 377
T EV++WG+ LGHG + HP+L+D V ++V C + H+ ++ G
Sbjct: 139 TDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLC-KFHSVFLSQKGQ 197
Query: 378 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 437
+YT G G LGHG+E + +P+ + G L G + S V+ HT V+T G ++TFG
Sbjct: 198 VYTCGHGRG--GRLGHGDEQTCLVPRLVEG-LSGHNCSQVAAAKDHTVVLTDDGCVYTFG 254
Query: 438 DGTFGVLGH-GDRISVSTPREVDS--LKGLRTVRAACGVWHT 476
F LG S + PR++ + LKG + A G +HT
Sbjct: 255 LNMFHQLGIIPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHT 296
Score = 191 (72.3 bits), Expect = 9.5e-09, Sum P(3) = 9.5e-09
Identities = 79/278 (28%), Positives = 120/278 (43%)
Query: 381 WGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVV-TSAGQLFTFGD 438
+G +C + LL HG +SL++ K PL+ + + P H T +++T+GD
Sbjct: 96 YGHIDCVWSLLKHG--VSLYMQDKEGLSPLDLL----MKDRPTHVVFKDTDPTEVYTWGD 149
Query: 439 GTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLF 498
T LGHG + S P +D R+ GV+ V + G+++
Sbjct: 150 NTNFTLGHGSQNSKHHPELLDLFS-----RS--GVYVKQVV---LCKFHSVFLSQKGQVY 199
Query: 499 TWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYG 558
T ++ LVP V L N QV+ TV LT G VYT G ++
Sbjct: 200 TCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMFH 259
Query: 559 QLG--DPKANGKLPTRVEGKLTKN-FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG 615
QLG P A+ +P +++ K K + +A G +H VL +R VYT G G+LGH
Sbjct: 260 QLGIIPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTLGLNG-GQLGHL 317
Query: 616 -DTDDRNF---PSLVEALKDKQVKSIVCGTSFTAAICL 649
D + P V AL K + + S A +C+
Sbjct: 318 LDPNGEKCVTTPRQVSALHHKDIAVSLVAASDGATVCV 355
Score = 183 (69.5 bits), Expect = 8.1e-09, Sum P(3) = 8.1e-09
Identities = 65/206 (31%), Positives = 106/206 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG+ T + LG G S + + +D F S V + Q + C H+ ++++
Sbjct: 144 VYTWGDNT-NFTLGHGSQNSKHHPEL-LDLFS----RSGVYVK-QVVLCKF-HSVFLSQK 195
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G+V++ G GGRLGHG + P+L++ L N VA + HT +T G +YT+G
Sbjct: 196 GQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFG- 254
Query: 384 SNCNFGLLGH-GNEMSLWLPKKLNGP-LEGIHVSSVSCGPWHTAVVTSAGQLFTFG-DGT 440
N F LG S +P+++ L+G + V+ G +HT + T ++T G +G
Sbjct: 255 LNM-FHQLGIIPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTLGLNG- 311
Query: 441 FGVLGH-----GDRISVSTPREVDSL 461
G LGH G++ V+TPR+V +L
Sbjct: 312 -GQLGHLLDPNGEKC-VTTPRQVSAL 335
Score = 157 (60.3 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 37/106 (34%), Positives = 56/106 (52%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
++YTWG N NF LGHG++ S P+ L+ G++V V +H+ ++ GQ++T
Sbjct: 143 EVYTWG-DNTNF-TLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYT 200
Query: 436 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
G G G LGHGD + PR V+ L G + A HT + +
Sbjct: 201 CGHGRGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTD 246
Score = 46 (21.3 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 82 YPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTG 117
Y + ++ L+ DR ++ KD D EV+ G
Sbjct: 113 YMQDKEGLSPLDLLMKDRPTHVVFKDTDPTEVYTWG 148
Score = 45 (20.9 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 946 SPTPAWDVSSAAIEQPSSPLTFQGAI 971
SP P W SS A +P+TF +
Sbjct: 1263 SPNP-WQSSSLAASPAVAPVTFASIV 1287
Score = 37 (18.1 bits), Expect = 9.8e-11, Sum P(3) = 9.8e-11
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 98 DRSLDLICKDKDEAEVWFTGLKALISRSH 126
++ +DL+ KDK+ W T L + H
Sbjct: 73 EKGVDLLVKDKESG--W-TALHRSVFYGH 98
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 170 (64.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 61/202 (30%), Positives = 94/202 (46%)
Query: 288 GVKMDSFVPKAVE--SAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDV 345
G K D VP+ ++ S D+++IA GG H+A++T GE+F G G+LG DV
Sbjct: 31 GHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDV 90
Query: 346 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWL-PKK 404
L AL V+ VACG T + +G + + G SN FG LG L P+K
Sbjct: 91 LCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCG-SNA-FGQLGVPQISGPCLIPQK 148
Query: 405 LNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGV---LGHGDRISV----STPRE 457
+ L+ V ++ G H T +G +F +G G + G + V P E
Sbjct: 149 IKQSLKEKAVG-IAAGLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCE 207
Query: 458 VDSLKGLRTVRAACGVWHTAAV 479
+ L+ ++ R A G +H ++
Sbjct: 208 IKGLEDVKVKRVAAGSYHCVSL 229
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 55/179 (30%), Positives = 86/179 (48%)
Query: 309 NIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLID--ALKNINVELVACGE 366
NIAC H+ L+ + V G G+LG G DV P+L+ + K +++ +A G
Sbjct: 3 NIAC---HSHLILRATCVCLKGANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGG 59
Query: 367 HHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWH-TA 425
H+ +T +G+++ G + G LG + + L L L G V V+CG W T
Sbjct: 60 GHSAVITGAGELFVCGHNKA--GQLGLNHTEDV-LCFTLCTALSGFCVQEVACG-WDFTI 115
Query: 426 VVTSAGQLFTFGDGTFGVLGHGDRIS--VSTPREV-DSLKGLRTVRAACGVWHTAAVVE 481
++ AG + + G FG LG +IS P+++ SLK + V A G+ H A E
Sbjct: 116 ILGRAGLVLSCGSNAFGQLGV-PQISGPCLIPQKIKQSLKE-KAVGIAAGLRHALAATE 172
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 62/240 (25%), Positives = 103/240 (42%)
Query: 415 SSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLK-GLRTVRA-ACG 472
++++C H+ ++ A + G ++G LG G + V P+ + + + +++ A G
Sbjct: 2 NNIAC---HSHLILRATCVCLKGANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGG 58
Query: 473 VWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFC- 531
H+A V+ G G+LF E L T AL FC
Sbjct: 59 GGHSA----VITGA--------GELFVCGHNKAGQLGLNHTEDVLCFTLCTAL--SGFCV 104
Query: 532 -QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK--LPTRVEGKLTKNFVEEIACG 588
+V+CG T+ L G V + GS +GQLG P+ +G +P +++ L + V IA G
Sbjct: 105 QEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISGPCLIPQKIKQSLKEKAVG-IAAG 163
Query: 589 DYHVAVLTSRTEVYTWGKGANGR---LGHGDTDD----RNFPSLVEALKDKQVKSIVCGT 641
H T V+ WG G R + G T P ++ L+D +VK + G+
Sbjct: 164 LRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEIKGLEDVKVKRVAAGS 223
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 207 (77.9 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 53/158 (33%), Positives = 81/158 (51%)
Query: 325 EVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV---ELVACGEHHTCAVTLSGDMYTW 381
EV++WG + LGHG HP+L+D +V ++V C + H+ ++ G +YT
Sbjct: 146 EVYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLC-KFHSVFLSHKGQIYTC 204
Query: 382 GGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTF 441
G G LGHG+E + +P+ + G L S ++ HT V+T G ++TFG TF
Sbjct: 205 GHGQG--GRLGHGDEQTCLVPRLVEG-LSSHQCSQIAAAKDHTVVLTEDGCVYTFGLNTF 261
Query: 442 GVLGH-GDRISVSTPREVDS--LKGLRTVRAACGVWHT 476
LG + S PR+V + LKG + A G +HT
Sbjct: 262 HQLGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHT 299
Score = 168 (64.2 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 78/277 (28%), Positives = 116/277 (41%)
Query: 381 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV-TSAGQLFTFGDG 439
+G +C LL HG +SL++ K G L + + + P H T +++T+G+
Sbjct: 99 YGYIDCVLSLLKHG--VSLYIQDK-EG-LSALDLV-MKDRPIHVVFKKTDLTEVYTWGNN 153
Query: 440 TFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFT 499
LGHG + S P VD L +V + VV + G+++T
Sbjct: 154 INFTLGHGGQQSKHHPELVD-LFPRNSV-------YIKQVV--LCKFHSVFLSHKGQIYT 203
Query: 500 WXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 559
++ LVP V L Q++ TV LT G VYT G + Q
Sbjct: 204 CGHGQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYTFGLNTFHQ 263
Query: 560 LG--DPKANGKLPTRVEGKLTKN-FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHG- 615
LG P AN +P +V+ K K V +A G +H VL ++ VYT G G+LG+
Sbjct: 264 LGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHT-VLWTKEAVYTMGLNG-GQLGYLL 321
Query: 616 DTDDRNF---PSLVEALKDKQVKSIVCGTSFTAAICL 649
D + P V AL K V + S A +C+
Sbjct: 322 DPNGEKCVTAPRQVSALHHKDVSVSLVSASDGATVCV 358
Score = 167 (63.8 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 57/204 (27%), Positives = 103/204 (50%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG + LG G +S + + +D F P+ S + V + C H+ ++ +
Sbjct: 147 VYTWGNNI-NFTLGHGGQQSKHHPEL-VDLF-PR--NSVYIKQV--VLCKF-HSVFLSHK 198
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G++++ G GGRLGHG + P+L++ L + +A + HT +T G +YT+G
Sbjct: 199 GQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYTFGL 258
Query: 384 SNCN-FGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGPWHTAVVTSAGQLFTFG--DG 439
+ + G+L S+ P+++ L+G V V+ G +HT + T ++T G G
Sbjct: 259 NTFHQLGILPPPANCSV--PRQVQAKNLKGRMVIGVAAGRFHTVLWTKEA-VYTMGLNGG 315
Query: 440 TFGVL--GHGDRISVSTPREVDSL 461
G L +G++ V+ PR+V +L
Sbjct: 316 QLGYLLDPNGEKC-VTAPRQVSAL 338
Score = 154 (59.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 35/106 (33%), Positives = 56/106 (52%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
++YTWG +N NF LGHG + S P+ ++ P +++ V +H+ ++ GQ++T
Sbjct: 146 EVYTWG-NNINF-TLGHGGQQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQIYT 203
Query: 436 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
G G G LGHGD + PR V+ L + + A HT + E
Sbjct: 204 CGHGQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAKDHTVVLTE 249
Score = 42 (19.8 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 82 YPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTG 117
Y + ++ + L+ DR + ++ K D EV+ G
Sbjct: 116 YIQDKEGLSALDLVMKDRPIHVVFKKTDLTEVYTWG 151
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 201 (75.8 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 54/163 (33%), Positives = 84/163 (51%)
Query: 321 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV---ELVACGEHHTCAVTLSGD 377
T +V++WG+ LGHG + HP+L+D V ++V C + H+ ++ G
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLC-KFHSVFLSQKGQ 197
Query: 378 MYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
+YT G G G LGHG+E + +P+ + G L G + S V+ HT V+T G ++TF
Sbjct: 198 VYTCGHGPG---GRLGHGDEQTCLVPRLVEG-LSGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 437 GDGTFGVLGHGDRIS-VSTPREVDS--LKGLRTVRAACGVWHT 476
G F LG S + PR++ + LKG + A G +HT
Sbjct: 254 GLNIFHQLGIIPPPSNCNVPRQMQAKYLKGRTIIGVAAGRFHT 296
Score = 194 (73.4 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 80/279 (28%), Positives = 120/279 (43%)
Query: 381 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV---TSAGQLFTFG 437
+G +C + LL HG +SL++ K EG+ + T VV T ++T+G
Sbjct: 96 YGHIDCVWSLLKHG--VSLYIQDK-----EGLSALDLLMKDRPTHVVFKNTDPTDVYTWG 148
Query: 438 DGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKL 497
D T LGHG + S P VD R+ GV+ V + G++
Sbjct: 149 DNTNFTLGHGSQNSKHHPELVDLFS-----RS--GVYIKQVV---LCKFHSVFLSQKGQV 198
Query: 498 FTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVY 557
+T ++ LVP V L N QV+ TV LT G VYT G ++
Sbjct: 199 YTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIF 258
Query: 558 GQLG--DPKANGKLPTRVEGKLTKN-FVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 614
QLG P +N +P +++ K K + +A G +H VL +R VYT G G+LGH
Sbjct: 259 HQLGIIPPPSNCNVPRQMQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTLGLNG-GQLGH 316
Query: 615 --GDTDDR--NFPSLVEALKDKQVKSIVCGTSFTAAICL 649
+ ++ P V AL K + + S A +C+
Sbjct: 317 LLDPSGEKCVTAPRQVSALHHKDIALSLVAASDGATVCV 355
Score = 178 (67.7 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 60/206 (29%), Positives = 107/206 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG+ T + LG G S + + +D F S V + Q + C H+ ++++
Sbjct: 144 VYTWGDNT-NFTLGHGSQNSKHHPEL-VDLFS----RSGVYIK-QVVLCKF-HSVFLSQK 195
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G+V++ G GGRLGHG + P+L++ L N VA + HT +T G +YT+G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGL 255
Query: 384 SNCN-FGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGPWHTAVVTSAGQLFTFG-DGT 440
+ + G++ + ++ P+++ L+G + V+ G +HT + T ++T G +G
Sbjct: 256 NIFHQLGIIPPPSNCNV--PRQMQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTLGLNG- 311
Query: 441 FGVLGH-----GDRISVSTPREVDSL 461
G LGH G++ V+ PR+V +L
Sbjct: 312 -GQLGHLLDPSGEKC-VTAPRQVSAL 335
Score = 160 (61.4 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 37/106 (34%), Positives = 56/106 (52%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
D+YTWG N NF LGHG++ S P+ ++ G+++ V +H+ ++ GQ++T
Sbjct: 143 DVYTWG-DNTNF-TLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYT 200
Query: 436 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
G G G LGHGD + PR V+ L G + A HT + E
Sbjct: 201 CGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTE 246
Score = 39 (18.8 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 82 YPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTG 117
Y + ++ + L+ DR ++ K+ D +V+ G
Sbjct: 113 YIQDKEGLSALDLLMKDRPTHVVFKNTDPTDVYTWG 148
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 205 (77.2 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 53/163 (32%), Positives = 84/163 (51%)
Query: 321 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV---ELVACGEHHTCAVTLSGD 377
T +V++WG+ LGHG + HP+L+D + ++V C + H+ ++ G
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQKGQ 197
Query: 378 MYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
+YT G G G LGHG+E + +P+ + G L G + S V+ HT V+T G ++TF
Sbjct: 198 VYTCGHGPG---GRLGHGDEQTCLVPRLVEG-LNGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 437 GDGTFGVLGH-GDRISVSTPREVDS--LKGLRTVRAACGVWHT 476
G F LG S + PR++ + LKG + A G +HT
Sbjct: 254 GLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHT 296
Score = 179 (68.1 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 78/281 (27%), Positives = 120/281 (42%)
Query: 381 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV---TSAGQLFTFG 437
+G +C + LL HG +SL++ K EG+ + T VV T ++T+G
Sbjct: 96 YGHIDCVWSLLKHG--VSLYIQDK-----EGLSALDLVMKDRPTHVVFKNTDPTDVYTWG 148
Query: 438 DGTFGVLGHGDRISVSTPREVD--SLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXG 495
D T LGHG + S P VD S G+ + +H+ + + G
Sbjct: 149 DNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQ------------KG 196
Query: 496 KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
+++T ++ LVP V L N QV+ TV LT G VYT G
Sbjct: 197 QVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLN 256
Query: 556 VYGQLG--DPKANGKLPTRVEGKLTKN-FVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 612
++ QLG P ++ +P +++ K K + +A G +H VL +R VYT G G+L
Sbjct: 257 IFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTMGLNG-GQL 314
Query: 613 GHG-DTDDRNF---PSLVEALKDKQVKSIVCGTSFTAAICL 649
G D + P V AL K + + S A +C+
Sbjct: 315 GCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCV 355
Score = 175 (66.7 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 57/204 (27%), Positives = 105/204 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG+ T + LG G S + + +D F S + + Q + C H+ ++++
Sbjct: 144 VYTWGDNT-NFTLGHGSQNSKHHPEL-VDLFS----RSGIYIK-QVVLCKF-HSVFLSQK 195
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G+V++ G GGRLGHG + P+L++ L N VA + HT +T G +YT+G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGL 255
Query: 384 SNCN-FGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGPWHTAVVTSAGQLFTFG--DG 439
+ + G++ + ++ P+++ L+G + V+ G +HT + T ++T G G
Sbjct: 256 NIFHQLGIIPPPSSCNV--PRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNGG 312
Query: 440 TFGVL--GHGDRISVSTPREVDSL 461
G L +G++ V+ PR+V +L
Sbjct: 313 QLGCLLDPNGEKC-VTAPRQVSAL 335
Score = 161 (61.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 38/106 (35%), Positives = 56/106 (52%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
D+YTWG N NF LGHG++ S P+ ++ GI++ V +H+ ++ GQ++T
Sbjct: 143 DVYTWG-DNTNF-TLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYT 200
Query: 436 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
G G G LGHGD + PR V+ L G + A HT + E
Sbjct: 201 CGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTE 246
Score = 40 (19.1 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 82 YPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTG 117
Y + ++ + L+ DR ++ K+ D +V+ G
Sbjct: 113 YIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWG 148
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 205 (77.2 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 53/163 (32%), Positives = 84/163 (51%)
Query: 321 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV---ELVACGEHHTCAVTLSGD 377
T +V++WG+ LGHG + HP+L+D + ++V C + H+ ++ G
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQKGQ 197
Query: 378 MYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
+YT G G G LGHG+E + +P+ + G L G + S V+ HT V+T G ++TF
Sbjct: 198 VYTCGHGPG---GRLGHGDEQTCLVPRLVEG-LNGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 437 GDGTFGVLGH-GDRISVSTPREVDS--LKGLRTVRAACGVWHT 476
G F LG S + PR++ + LKG + A G +HT
Sbjct: 254 GLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHT 296
Score = 179 (68.1 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 78/281 (27%), Positives = 120/281 (42%)
Query: 381 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV---TSAGQLFTFG 437
+G +C + LL HG +SL++ K EG+ + T VV T ++T+G
Sbjct: 96 YGHIDCVWSLLKHG--VSLYIQDK-----EGLSALDLVMKDRPTHVVFKNTDPTDVYTWG 148
Query: 438 DGTFGVLGHGDRISVSTPREVD--SLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXG 495
D T LGHG + S P VD S G+ + +H+ + + G
Sbjct: 149 DNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQ------------KG 196
Query: 496 KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
+++T ++ LVP V L N QV+ TV LT G VYT G
Sbjct: 197 QVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLN 256
Query: 556 VYGQLG--DPKANGKLPTRVEGKLTKN-FVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 612
++ QLG P ++ +P +++ K K + +A G +H VL +R VYT G G+L
Sbjct: 257 IFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTMGLNG-GQL 314
Query: 613 GHG-DTDDRNF---PSLVEALKDKQVKSIVCGTSFTAAICL 649
G D + P V AL K + + S A +C+
Sbjct: 315 GCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCV 355
Score = 175 (66.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 57/204 (27%), Positives = 105/204 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG+ T + LG G S + + +D F S + + Q + C H+ ++++
Sbjct: 144 VYTWGDNT-NFTLGHGSQNSKHHPEL-VDLFS----RSGIYIK-QVVLCKF-HSVFLSQK 195
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G+V++ G GGRLGHG + P+L++ L N VA + HT +T G +YT+G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGL 255
Query: 384 SNCN-FGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGPWHTAVVTSAGQLFTFG--DG 439
+ + G++ + ++ P+++ L+G + V+ G +HT + T ++T G G
Sbjct: 256 NIFHQLGIIPPPSSCNV--PRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNGG 312
Query: 440 TFGVL--GHGDRISVSTPREVDSL 461
G L +G++ V+ PR+V +L
Sbjct: 313 QLGCLLDPNGEKC-VTAPRQVSAL 335
Score = 161 (61.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 38/106 (35%), Positives = 56/106 (52%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
D+YTWG N NF LGHG++ S P+ ++ GI++ V +H+ ++ GQ++T
Sbjct: 143 DVYTWG-DNTNF-TLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYT 200
Query: 436 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
G G G LGHGD + PR V+ L G + A HT + E
Sbjct: 201 CGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTE 246
Score = 40 (19.1 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 82 YPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTG 117
Y + ++ + L+ DR ++ K+ D +V+ G
Sbjct: 113 YIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWG 148
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 205 (77.2 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 53/163 (32%), Positives = 84/163 (51%)
Query: 321 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV---ELVACGEHHTCAVTLSGD 377
T +V++WG+ LGHG + HP+L+D + ++V C + H+ ++ G
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQKGQ 197
Query: 378 MYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
+YT G G G LGHG+E + +P+ + G L G + S V+ HT V+T G ++TF
Sbjct: 198 VYTCGHGPG---GRLGHGDEQTCLVPRLVEG-LNGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 437 GDGTFGVLGH-GDRISVSTPREVDS--LKGLRTVRAACGVWHT 476
G F LG S + PR++ + LKG + A G +HT
Sbjct: 254 GLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHT 296
Score = 179 (68.1 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 78/281 (27%), Positives = 120/281 (42%)
Query: 381 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV---TSAGQLFTFG 437
+G +C + LL HG +SL++ K EG+ + T VV T ++T+G
Sbjct: 96 YGHIDCVWSLLKHG--VSLYIQDK-----EGLSALDLVMKDRPTHVVFKNTDPTDVYTWG 148
Query: 438 DGTFGVLGHGDRISVSTPREVD--SLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXG 495
D T LGHG + S P VD S G+ + +H+ + + G
Sbjct: 149 DNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQ------------KG 196
Query: 496 KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
+++T ++ LVP V L N QV+ TV LT G VYT G
Sbjct: 197 QVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLN 256
Query: 556 VYGQLG--DPKANGKLPTRVEGKLTKN-FVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 612
++ QLG P ++ +P +++ K K + +A G +H VL +R VYT G G+L
Sbjct: 257 IFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTMGLNG-GQL 314
Query: 613 GHG-DTDDRNF---PSLVEALKDKQVKSIVCGTSFTAAICL 649
G D + P V AL K + + S A +C+
Sbjct: 315 GCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCV 355
Score = 175 (66.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 57/204 (27%), Positives = 105/204 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG+ T + LG G S + + +D F S + + Q + C H+ ++++
Sbjct: 144 VYTWGDNT-NFTLGHGSQNSKHHPEL-VDLFS----RSGIYIK-QVVLCKF-HSVFLSQK 195
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G+V++ G GGRLGHG + P+L++ L N VA + HT +T G +YT+G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGL 255
Query: 384 SNCN-FGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGPWHTAVVTSAGQLFTFG--DG 439
+ + G++ + ++ P+++ L+G + V+ G +HT + T ++T G G
Sbjct: 256 NIFHQLGIIPPPSSCNV--PRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNGG 312
Query: 440 TFGVL--GHGDRISVSTPREVDSL 461
G L +G++ V+ PR+V +L
Sbjct: 313 QLGCLLDPNGEKC-VTAPRQVSAL 335
Score = 161 (61.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 38/106 (35%), Positives = 56/106 (52%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
D+YTWG N NF LGHG++ S P+ ++ GI++ V +H+ ++ GQ++T
Sbjct: 143 DVYTWG-DNTNF-TLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYT 200
Query: 436 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
G G G LGHGD + PR V+ L G + A HT + E
Sbjct: 201 CGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTE 246
Score = 40 (19.1 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 82 YPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTG 117
Y + ++ + L+ DR ++ K+ D +V+ G
Sbjct: 113 YIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWG 148
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 203 (76.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 53/163 (32%), Positives = 84/163 (51%)
Query: 321 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV---ELVACGEHHTCAVTLSGD 377
T +V++WG+ LGHG + HP+L+D + ++V C + H+ ++ G
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQKGQ 197
Query: 378 MYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTF 436
+YT G G G LGHG+E + +P+ + G L G + S V+ HT V+T G ++TF
Sbjct: 198 VYTCGHGPG---GRLGHGDEQTCLVPRLVEG-LSGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 437 GDGTFGVLGH-GDRISVSTPREVDS--LKGLRTVRAACGVWHT 476
G F LG S + PR++ + LKG + A G +HT
Sbjct: 254 GLNIFHQLGLIPPPSSCNVPRQMQAKYLKGRTIIGVAAGRFHT 296
Score = 180 (68.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 77/281 (27%), Positives = 121/281 (43%)
Query: 381 WGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVV---TSAGQLFTFG 437
+G +C + LL HG ++L++ K EG+ + T VV T ++T+G
Sbjct: 96 YGHIDCVWSLLKHG--VNLYIQDK-----EGLSALDLVMKDRPTHVVFKNTDPTDVYTWG 148
Query: 438 DGTFGVLGHGDRISVSTPREVD--SLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXG 495
D T LGHG + S P VD S G+ + +H+ + + G
Sbjct: 149 DNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQ------------KG 196
Query: 496 KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
+++T ++ LVP V L N QV+ TV LT G VYT G
Sbjct: 197 QVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLN 256
Query: 556 VYGQLG--DPKANGKLPTRVEGKLTKN-FVEEIACGDYHVAVLTSRTEVYTWGKGANGRL 612
++ QLG P ++ +P +++ K K + +A G +H VL +R VYT G G+L
Sbjct: 257 IFHQLGLIPPPSSCNVPRQMQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTMGLNG-GQL 314
Query: 613 GHG-DTDDRNF---PSLVEALKDKQVKSIVCGTSFTAAICL 649
G+ D + P V AL K + + S A +C+
Sbjct: 315 GYLLDPNGEKCVTAPRQVSALHHKDITLSLVAASDGATVCV 355
Score = 177 (67.4 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 58/204 (28%), Positives = 105/204 (51%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG+ T + LG G S + + +D F S + + Q + C H+ ++++
Sbjct: 144 VYTWGDNT-NFTLGHGSQNSKHHPEL-VDLFS----RSGIYIK-QVVLCKF-HSVFLSQK 195
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGG 383
G+V++ G GGRLGHG + P+L++ L N VA + HT +T G +YT+G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGL 255
Query: 384 SNCN-FGLLGHGNEMSLWLPKKLNGP-LEGIHVSSVSCGPWHTAVVTSAGQLFTFG--DG 439
+ + GL+ + ++ P+++ L+G + V+ G +HT + T ++T G G
Sbjct: 256 NIFHQLGLIPPPSSCNV--PRQMQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNGG 312
Query: 440 TFGVL--GHGDRISVSTPREVDSL 461
G L +G++ V+ PR+V +L
Sbjct: 313 QLGYLLDPNGEKC-VTAPRQVSAL 335
Score = 162 (62.1 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 46/146 (31%), Positives = 70/146 (47%)
Query: 337 LGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNE 396
L HGV+ + + + AL + + H T D+YTWG N NF LGHG++
Sbjct: 106 LKHGVNLYIQDKEGLSALDLVMKDRPT---HVVFKNTDPTDVYTWG-DNTNF-TLGHGSQ 160
Query: 397 MSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTP 455
S P+ ++ GI++ V +H+ ++ GQ++T G G G LGHGD + P
Sbjct: 161 NSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVP 220
Query: 456 REVDSLKGLRTVRAACGVWHTAAVVE 481
R V+ L G + A HT + E
Sbjct: 221 RLVEGLSGHNCSQVAAAKDHTVVLTE 246
Score = 40 (19.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 82 YPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTG 117
Y + ++ + L+ DR ++ K+ D +V+ G
Sbjct: 113 YIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWG 148
>TAIR|locus:2034486 [details] [associations]
symbol:BRX "BREVIS RADIX" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0015250
"water channel activity" evidence=ISS] [GO:0048364 "root
development" evidence=IMP] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=IMP] [GO:0048527 "lateral root development" evidence=IMP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009737
GO:GO:0005634 GO:GO:0009734 EMBL:AC079041 GO:GO:0048527
GO:GO:0009736 eggNOG:NOG286599 HOGENOM:HOG000240563
ProtClustDB:CLSN2688709 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 EMBL:AY702648 EMBL:AY702649 EMBL:BT002854
EMBL:BT004390 IPI:IPI00541613 PIR:A86443 RefSeq:NP_174471.2
UniGene:At.40252 IntAct:Q17TI5 STRING:Q17TI5 PRIDE:Q17TI5
EnsemblPlants:AT1G31880.1 GeneID:840078 KEGG:ath:AT1G31880
TAIR:At1g31880 InParanoid:Q84JB6 OMA:NRERIQT PhylomeDB:Q17TI5
Genevestigator:Q17TI5 Uniprot:Q17TI5
Length = 344
Score = 177 (67.4 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 53/180 (29%), Positives = 81/180 (45%)
Query: 915 KDVIKSLTAQLKDMAEMLPVGAVRNSN---SFHSSPTPAWDVSSAAIEQPSSPLTFQGAI 971
K+ +KSLT Q+KDMA GA + SSP S + S + +
Sbjct: 29 KEAVKSLTIQIKDMALKFS-GAYKQCKPCTGSSSSPLKKGHRSFPDYDNASEGVPY---- 83
Query: 972 PXXXXXXXXXXXXDF-GDNRSPSQTEASHCEATTKNKNRTMKAEPAQ---GD----EWVE 1023
P DF + P+ S + N ++ A+ D EW+
Sbjct: 84 PFMGGSAGSTPAWDFTNSSHHPAGRLESKFTSIYGNDRESISAQSCDVVLDDDGPKEWMA 143
Query: 1024 QDETGVYITLVALPGGLKDLKRVRFSRKKFSEKQAEQWWAANRARVYQQYNVSMVDKSSV 1083
Q E GV+IT +LP G DLKR+RFSR+ F + QA++WW N ++ + YNV ++ ++
Sbjct: 144 QVEPGVHITFASLPTGGNDLKRIRFSREMFDKWQAQRWWGENYDKIVELYNVQRFNRQAL 203
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 996 EASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVYITLVALPGGLKDLKRVRFSRKKFSE 1055
+A+ ++++ +M EW+E+DE GVYIT+ L G ++L+RVRFSR++F E
Sbjct: 266 DAARTTTSSRDDPPSMSNASEMQAEWIEEDEPGVYITIRQLSDGTRELRRVRFSRERFGE 325
Query: 1056 KQAEQWWAANRARVYQQY 1073
A+ WW NR R+ QY
Sbjct: 326 VHAKTWWEQNRERIQTQY 343
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 163 (62.4 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 53/160 (33%), Positives = 76/160 (47%)
Query: 295 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL---GGRLGHGVDSDV----SH 347
VP+A+E V IA G RHA T G VF WG L G RL G +
Sbjct: 30 VPQAIELHKE-KVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKE 88
Query: 348 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLN 406
P + L+N V G H+ ++T +G++Y WG SN G L NE + L +P+K+
Sbjct: 89 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWG-SN-KHGQLA--NEAAFLPVPQKIE 144
Query: 407 GP-LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
+ V+++ G H T G++FT+G +G LG
Sbjct: 145 AHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 184
Score = 142 (55.0 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 54/192 (28%), Positives = 81/192 (42%)
Query: 426 VVTSAGQLFTFGDGTFGVLG--HGDRISVSTPREVDSLKGLRTVRAACGVWHT-AAVVEV 482
++T GQ+ + G +FG LG HG R V P+ ++ K + V A G+ H AA
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIELHKE-KVVCIAAGLRHAVAATASG 58
Query: 483 MVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVA 542
+V G+ KE P+ V L V G + +
Sbjct: 59 IVFQWGTGLASCGRRLC--PGQTLPLFFTAKE----PSRVTGLENSKAMCVLAGSDHSAS 112
Query: 543 LTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNF-VEEIACGDYHVAVLTSRTEV 601
LT G VY GS +GQL + A +P ++E +N V I G H+ T ++
Sbjct: 113 LTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKM 172
Query: 602 YTWGKGANGRLG 613
+TWG+ G+LG
Sbjct: 173 FTWGRADYGQLG 184
Score = 141 (54.7 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 51/189 (26%), Positives = 82/189 (43%)
Query: 319 LVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 376
++T+ G+V S G G+LG HG V P+ I+ K V +A G H A T SG
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQAIELHKE-KVVCIAAGLRHAVAATASG 58
Query: 377 DMYTWGGSNCNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSC---GPWHTAVVTSAGQ 432
++ WG + G L G + L+ K + G+ S C G H+A +T AG+
Sbjct: 59 IVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 433 LFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEVMVG-XXXXXX 491
++ +G G L + + + P++++ A C + V + G
Sbjct: 119 VYVWGSNKHGQLAN-EAAFLPVPQKIE---------AHC--FQNEKVTAIWSGWTHLVAQ 166
Query: 492 XXXGKLFTW 500
GK+FTW
Sbjct: 167 TETGKMFTW 175
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 147 (56.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 79/329 (24%), Positives = 136/329 (41%)
Query: 346 SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG-HGNEMSLW-LPK 403
S P L + K + + A ++ +CA+ +G++Y WG CN G+LG + +++ + P
Sbjct: 157 SFPPLAEGHKVVQL---AATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPW 213
Query: 404 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG--DRISVST--PREVD 459
K+ ++ ++ G H + G +F +G+G LG +R + T PR
Sbjct: 214 KVP-TFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPF- 271
Query: 460 SLKGLRTVR-AACGVWHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXX--XXXXXKEAR 516
GLR V+ A G H A+ + KL +W ++
Sbjct: 272 ---GLRHVKYIASGENHCFALTK------------DNKLVSWGLNQFGQCGVSEDVEDGA 316
Query: 517 LVPTCVAALVEPNFC--QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTR-- 572
LV + N ++ G ++ L+ G +Y+ G ++G PK N LP
Sbjct: 317 LVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDN--LPEYTY 374
Query: 573 --VEGKL------TK-NFV---EEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGD-TDD 619
V GK TK N V + +A G +H + Y+WG G +G G DD
Sbjct: 375 KDVHGKARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDD 434
Query: 620 RNFPSLVE--ALKDKQVKSIVCGTSFTAA 646
P+ ++ A +D + + CG F+ +
Sbjct: 435 TEVPTRIKNTATQDHNIILVGCGGQFSVS 463
Score = 140 (54.3 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 51/185 (27%), Positives = 82/185 (44%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSD----VSHPKLIDALKNINVELV 362
V+ IA G H +TK ++ SWG G+ G D + V+ PK + N+ + +
Sbjct: 276 VKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSI 335
Query: 363 ACGEHHTCAVTLSGDMYTWGGSNC-NFGLLG-----------HGNEMSLWLPKKLNGPLE 410
A GEHH+ ++ GD+Y+ G + G+ HG ++ LP KLN +
Sbjct: 336 AAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPK 395
Query: 411 GIHVSSVSCGPWHTAVVTSAGQLFTFGDG-TFGV-LG-HGDRISVSTPREVDSLKGLRTV 467
SV+ G H+ V G +++G G T+ V LG D V T + + + +
Sbjct: 396 ---FKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNII 452
Query: 468 RAACG 472
CG
Sbjct: 453 LVGCG 457
Score = 132 (51.5 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 57/240 (23%), Positives = 109/240 (45%)
Query: 264 VFIWG--ECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 321
V+ WG C +GILG ++ +K+ P V + ++ +A G H +
Sbjct: 186 VYAWGTFRCN-EGILG--FYQDK----IKIQK-TPWKVPTFSKYNIVQLAPGKDHILFLD 237
Query: 322 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK-NI-NVELVACGEHHTCAVTLSGDMY 379
++G VF+WG +LG V + K +D + +V+ +A GE+H A+T +
Sbjct: 238 EEGMVFAWGNGQQNQLGRKV-MERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLV 296
Query: 380 TWGGSNCNFGLLGHGNEMS----LWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
+WG + FG G ++ + PK+L P + + + S++ G H+ +++ G L++
Sbjct: 297 SWGLNQ--FGQCGVSEDVEDGALVTKPKRLALP-DNVVIRSIAAGEHHSLILSQDGDLYS 353
Query: 436 FGDGTFGVLG--------------HGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
G +G HG +V P +++++ ++V A G H+ AV +
Sbjct: 354 CGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSV--AAGSHHSVAVAQ 411
Score = 76 (31.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 25/92 (27%), Positives = 44/92 (47%)
Query: 264 VFIWGECTGDGI-LG-GGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVT 321
+F WG TG LG G + ++ +++ F+P+ E+ ++ + A GG H +
Sbjct: 48 IFCWG--TGSMCELGLGPLAKNKEVKRPRLNPFLPRD-EAKII----SFAVGGMHTLALD 100
Query: 322 KQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA 353
++ V+SWG G LG + K +DA
Sbjct: 101 EESNVWSWGCNDVGALGRDTSNAKEQLKDMDA 132
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 191 (72.3 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 55/161 (34%), Positives = 79/161 (49%)
Query: 321 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINV---ELVACGEHHTCAVTLSGD 377
T EV++WG+ LGHG + HP+L+D V ++V C + H+ ++ G
Sbjct: 139 TDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLC-KFHSVFLSQQGQ 197
Query: 378 MYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG 437
+YT G G LGHG+E + +P+ + G L G S V+ HT V+T G ++TFG
Sbjct: 198 VYTCGHGRG--GRLGHGDEQTCLVPRLVEG-LSGHSCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 438 DGTFGVLGH-GDRISVSTPRE--VDSLKGLRTV-RAACGVW 474
TF LG S + PR+ V KG V R A W
Sbjct: 255 LNTFHQLGIIPPPSSCNVPRQLTVRMKKGHTVVCRKAWRFW 295
Score = 151 (58.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 37/106 (34%), Positives = 55/106 (51%)
Query: 377 DMYTWGGSNCNFGLLGHGNEMSLWLPKKLN-GPLEGIHVSSVSCGPWHTAVVTSAGQLFT 435
++YTWG N NF LGHG++ S P+ L+ ++V V +H+ ++ GQ++T
Sbjct: 143 EVYTWG-DNTNF-TLGHGSQNSKHHPELLDLFSRSRVYVKQVVLCKFHSVFLSQQGQVYT 200
Query: 436 FGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
G G G LGHGD + PR V+ L G + A HT + E
Sbjct: 201 CGHGRGGRLGHGDEQTCLVPRLVEGLSGHSCSQVAAAKDHTVVLTE 246
Score = 139 (54.0 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 38/119 (31%), Positives = 62/119 (52%)
Query: 264 VFIWGECTGDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQ 323
V+ WG+ T + LG G S + + +D F S V + Q + C H+ +++Q
Sbjct: 144 VYTWGDNT-NFTLGHGSQNSKHHPEL-LDLFS----RSRVYVK-QVVLCKF-HSVFLSQQ 195
Query: 324 GEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWG 382
G+V++ G GGRLGHG + P+L++ L + VA + HT +T G +YT+G
Sbjct: 196 GQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHSCSQVAAAKDHTVVLTEDGCVYTFG 254
Score = 41 (19.5 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 82 YPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTG 117
Y + ++ L+ DR ++ K+ D EV+ G
Sbjct: 113 YMQDKEGLSPLDLLMKDRPAHVVFKNTDPTEVYTWG 148
Score = 38 (18.4 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 98 DRSLDLICKDKDEAEVWFTGLKALISRSH 126
++ +DL+ KDK+ W T L I H
Sbjct: 73 EKGVDLLVKDKESG--W-TALHRSIFYGH 98
>WB|WBGene00017190 [details] [associations]
symbol:F07B7.12 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR027047
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005 EMBL:FO081059
GeneTree:ENSGT00390000011403 KO:K10693 PANTHER:PTHR12846
eggNOG:NOG240798 RefSeq:NP_505281.1 ProteinModelPortal:Q965Y9
SMR:Q965Y9 STRING:Q965Y9 PaxDb:Q965Y9 EnsemblMetazoa:F07B7.12
GeneID:184118 KEGG:cel:CELE_F07B7.12 UCSC:F07B7.12 CTD:184118
WormBase:F07B7.12 InParanoid:Q965Y9 OMA:KESRITH NextBio:923582
Uniprot:Q965Y9
Length = 1900
Score = 131 (51.2 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 407 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT 466
GP + + VSSVSCG +HT ++ S ++FTFG G LG GD +S +TP++V
Sbjct: 763 GPHD-VKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTVI 821
Query: 467 VRAACGVWHT 476
V+ A G HT
Sbjct: 822 VQVAAGSNHT 831
Score = 115 (45.5 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 582 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 641
V ++CG++H +L S V+T+G +G+LG GDT +N P V D + + G+
Sbjct: 769 VSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTVIVQVAAGS 828
Query: 642 SFT 644
+ T
Sbjct: 829 NHT 831
Score = 97 (39.2 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 312 CGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 370
C H V++ G++F +GG H + +VS ++++ L N+ + +A G+ H
Sbjct: 575 CASGHVYGYVSENGKIF-----MGGL--HTMRVNVSS-QMLNGLDNVMISSLALGKSHGV 626
Query: 371 AVTLSGDMYTWGGSNCN 387
AVT +G ++TWG +N N
Sbjct: 627 AVTRNGHLFTWGLNNMN 643
Score = 93 (37.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 26/81 (32%), Positives = 40/81 (49%)
Query: 533 VSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDYH 591
VSCG+ TV L + V+T GS +GQLG K P +V + + ++A G H
Sbjct: 772 VSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILP-SDTVIVQVAAGSNH 830
Query: 592 VAVLTSRTEVYTWGKGANGRL 612
+ + V+T+G G+L
Sbjct: 831 TILRANDGSVFTFGAFGKGQL 851
Score = 66 (28.3 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 266 IWGECTGDG-ILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 324
++G + +G I GG+H V + S + +++ ++ ++A G H VT+ G
Sbjct: 580 VYGYVSENGKIFMGGLHTMR----VNVSSQMLNGLDNVMI---SSLALGKSHGVAVTRNG 632
Query: 325 EVFSWG 330
+F+WG
Sbjct: 633 HLFTWG 638
Score = 58 (25.5 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP---KAN-GKLPTRVEG 575
QV+ G + T+ G V+T G+ GQL P KA +P +V G
Sbjct: 823 QVAAGSNHTILRANDGSVFTFGAFGKGQLARPAGEKAGWNAIPEKVSG 870
Score = 37 (18.1 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 548 HVYTMGSPVYGQLGDPKANGKLPTRVEG 575
H + + + + G D ANGK +G
Sbjct: 1134 HWHVVSAKISGPSSDCGANGKRHVECDG 1161
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 167 (63.8 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 73/265 (27%), Positives = 105/265 (39%)
Query: 295 VPKAVESAV-VLDVQNIAC---GGRHAALVTKQGEVFSWGEEL---GGRLGHGVDSDV-- 345
VP + ES +L + + C G RHA T G VF WG L G RL G +
Sbjct: 3 VPPSPESCCHMLHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFF 62
Query: 346 --SHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLP 402
P + L+N V G H+ ++T +G++Y WG SN G L NE + L +P
Sbjct: 63 TAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWG-SN-KHGQLA--NEAAFLPVP 118
Query: 403 KKLNGP-LEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREV-DS 460
+K+ + V+++ G H T G++FT+G +G LG E DS
Sbjct: 119 QKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDS 178
Query: 461 -LKGLRTVRAACGVWHT-AAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLV 518
L R + H EV G G ++W +
Sbjct: 179 FLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIGGVCYSWGWNEHGMCGDGTEANVWA 238
Query: 519 PTCVAALVEPNFCQVSCG--HSLTV 541
P V AL+ + V CG HSL +
Sbjct: 239 PKPVQALLSSSGLLVGCGAGHSLAL 263
Score = 155 (59.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 52/190 (27%), Positives = 83/190 (43%)
Query: 310 IACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDA--LKNINVELVACGEH 367
+ G H+A +T GEV+ WG G+L + + + P+ I+A +N V + G
Sbjct: 81 VLAGSDHSASLTDAGEVYVWGSNKHGQLANEA-AFLPVPQKIEAHCFQNEKVTAIWSGWT 139
Query: 368 HTCAVTLSGDMYTWGGSNCNFGLLGHGNEM-SLW--------LP--KKLNGPLEGIH--- 413
H A T +G M+TWG ++G LG E W LP + N H
Sbjct: 140 HLVAQTETGKMFTWG--RADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLT 197
Query: 414 -VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACG 472
+ VSCG H + G +++G G+ G G +V P+ V +L + CG
Sbjct: 198 GATEVSCGSEHNLAIIG-GVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCG 256
Query: 473 VWHTAAVVEV 482
H+ A+ ++
Sbjct: 257 AGHSLALCQL 266
Score = 39 (18.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 69 RIIPGQRTPIFQRYPRPEK 87
R+ PGQ P+F P +
Sbjct: 51 RLCPGQTLPLFFTAKEPSR 69
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 153 (58.9 bits), Expect = 2.7e-09, Sum P(4) = 2.7e-09
Identities = 56/198 (28%), Positives = 96/198 (48%)
Query: 292 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHG-VDSDVSHPKL 350
D F K + ++ ++ + G H+ +T+ GE++ WG+ +L + + P
Sbjct: 21 DKFSGKPTFNPLIPNICFMDNGYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIK 80
Query: 351 IDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLE 410
I + N V+ ++CG + + A+ +G +Y WG L G + + P K++ L+
Sbjct: 81 IQVIPNQRVKSISCGGNFSAAIMENGLLYVWG-------TLIEGGKCTE-SPTKVD-LLK 131
Query: 411 GIHVSSVSCGPWHTAVVTSAG------QLFTFGDGTFGVLGH-GDRISVSTPREVDSLKG 463
G V+ VS G H AVV + ++T+G G LG GD I+ + PR V +L G
Sbjct: 132 G--VTCVSIGINHCAVVADSPTTPEKRSVYTWGTNRKGQLGVVGDSIT-NAPRRV-TL-G 186
Query: 464 LRTVRAACGVWHTAAVVE 481
+ + CG TAA+VE
Sbjct: 187 SKAISVCCGEEFTAAIVE 204
Score = 77 (32.2 bits), Expect = 2.7e-09, Sum P(4) = 2.7e-09
Identities = 29/148 (19%), Positives = 59/148 (39%)
Query: 480 VEVMVGXXXXXXXXXG-KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHS 538
+ V G G ++F W + ++ V + + ++SC +
Sbjct: 190 ISVCCGEEFTAAIVEGNEVFVWGYNKSRQICSNNSD-EIISIPVKPFLGRDIVELSCTKN 248
Query: 539 LTVALTTTGHVYTMGS-PVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTS 597
A + G+V GS ++GD K P N +++I+ H+ VL+
Sbjct: 249 YIAARSGVGNVCVWGSNEQVCRIGDDKFIN-FP---------NKIKQISASTSHILVLSE 298
Query: 598 RTEVYTWGKGANGRLGHGDTDDRNFPSL 625
+ E+++WG + +L H D + P++
Sbjct: 299 KGEIFSWGNSEDNQLSH-KLDVNSSPNI 325
Score = 53 (23.7 bits), Expect = 2.7e-09, Sum P(4) = 2.7e-09
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 772 SSKRNKKQEFNRTRGLPLP---NGVSQGNALNN-SKSSNPVFGSTKKFFSASLPGSRI 825
SS + ++ + P P N +S GN N+ S SSN +F + F S+S G+ I
Sbjct: 696 SSSQQQQSTPSSLTSSPSPSQRNSLSTGNIANSLSLSSNALF--SPNFLSSSKDGNNI 751
Score = 50 (22.7 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 23/99 (23%), Positives = 37/99 (37%)
Query: 528 PN-FCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG-------DPKANGKLPTRVEGKLTK 579
PN Q+S S + L+ G +++ G+ QL P N T T
Sbjct: 280 PNKIKQISASTSHILVLSEKGEIFSWGNSEDNQLSHKLDVNSSPNINSSSGTTTPTTNTT 339
Query: 580 NFVEEIACGDYHVAVLTSRT--EVYTWGKGANGRLGHGD 616
++ +V L R VY+WGK + + G+
Sbjct: 340 TTTKKSTLQFNNVYQLEGRNVLSVYSWGKSSGAIIEPGN 378
Score = 46 (21.3 bits), Expect = 4.4e-09, Sum P(3) = 4.4e-09
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 759 GTSMESLKK--VESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNNSKSSNPVFGSTKKF 815
G +++S+++ SGSS N N + P G + AL S SS + +TK +
Sbjct: 821 GGAIQSIQRQFANSGSSSNN-----NNSNNSPSLIGSNSSPALTFSNSSGNLIETTKLY 874
Score = 39 (18.8 bits), Expect = 2.7e-09, Sum P(4) = 2.7e-09
Identities = 13/70 (18%), Positives = 28/70 (40%)
Query: 939 NSNSFHSSPTPAWDVSSAAIEQPSSPLTFQGAIPXXXXXXXXXXXXDFGDNRSPSQTEAS 998
+S+S SS + + ++S + + L+F G P G Q + +
Sbjct: 773 SSSSSGSSLSSSPNLSPTIVNRSGYSLSFSGGTPSSRDSSVNNLLNTSGGAIQSIQRQFA 832
Query: 999 HCEATTKNKN 1008
+ +++ N N
Sbjct: 833 NSGSSSNNNN 842
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 43/143 (30%), Positives = 72/143 (50%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV--A 363
DV GG H ++K G+V+S+G G LG D+ V +++ + ++V +
Sbjct: 68 DVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR--DTSVEGSEMVPGKVELQEKVVQVS 125
Query: 364 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPW 422
G+ HT A+T G ++ WG N G++G M +P ++ L+ + V V+ G
Sbjct: 126 AGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ--LD-VPVVKVASGND 182
Query: 423 HTAVVTSAGQLFTFGDGTFGVLG 445
H ++T+ G L+T G G G LG
Sbjct: 183 HLVMLTADGDLYTLGCGEQGQLG 205
Score = 125 (49.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 51/197 (25%), Positives = 86/197 (43%)
Query: 423 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 482
H + T G + T G G G LG G+ + + S+ V+A G HT + +
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPE-DVVQAEAGGMHTVCLSK- 84
Query: 483 MVGXXXXXXXXXGKLFTWX--XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLT 540
G+++++ + + +VP V ++ QVS G S T
Sbjct: 85 -----------SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSHT 131
Query: 541 VALTTTGHVYTMGS--PVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 596
ALT G V+ GS G +G +P +P +V+ + V ++A G+ H+ +LT
Sbjct: 132 AALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP---VVKVASGNDHLVMLT 188
Query: 597 SRTEVYTWGKGANGRLG 613
+ ++YT G G G+LG
Sbjct: 189 ADGDLYTLGCGEQGQLG 205
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 138 (53.6 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 584 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 643
+++CG +H VL +VYT+G G +G+LGHGD + R P+LV+AL + + G++
Sbjct: 920 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNH 978
Query: 644 TAAICL 649
TA + +
Sbjct: 979 TAVLVM 984
Score = 125 (49.1 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 31/83 (37%), Positives = 43/83 (51%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDY 590
QVSCG +V L G VYT G +GQLG N + PT V+ + ++ G
Sbjct: 920 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS--TQVTAGSN 977
Query: 591 HVAVLTSRTEVYTWGKGANGRLG 613
H AVL +V+T+G + G+LG
Sbjct: 978 HTAVLVMDGQVFTFGSFSKGQLG 1000
Score = 117 (46.2 bits), Expect = 2.7e-05, Sum P(4) = 2.7e-05
Identities = 28/69 (40%), Positives = 36/69 (52%)
Query: 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAAC 471
+ VSCG H+ V+ G ++TFG G G LGHGD S P V +L G T +
Sbjct: 916 VRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTA 974
Query: 472 GVWHTAAVV 480
G HTA +V
Sbjct: 975 GSNHTAVLV 983
Score = 103 (41.3 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 46/179 (25%), Positives = 72/179 (40%)
Query: 278 GGIHRSGSYAGVKMDSFVPKA---VESAVVLD--VQNIACG--GRHAALVTKQGEVFSWG 330
G I+ +G Y + + P A VE + + + + G G HA LV + G VF G
Sbjct: 524 GKIYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSVFFTG 583
Query: 331 EELGGRLGHGV----DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
G G S PK I ++ V AC + ++ G++Y +G
Sbjct: 584 SASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGSSSVISKDGELYMFGKDAI 643
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
+ + SL L+G V+ V+ G HT V+ G+++TFG G G
Sbjct: 644 ------YSDSSSLV------SDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 690
Score = 97 (39.2 bits), Expect = 2.1e-07, Sum P(4) = 2.1e-07
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 311 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 370
AC +++++K GE++ +G++ + SD S L+ LK V VA G+ HTC
Sbjct: 620 ACNNGSSSVISKDGELYMFGKD-------AIYSDSS--SLVSDLKGHFVTQVAMGKAHTC 670
Query: 371 AVTLSGDMYTWGGSN---C-------NFGLLGHGNE-MSLWLPKKLNGPLEGIHVSSVSC 419
+ +G+++T+G +N C N G G G E M+ + + L L+ S+ C
Sbjct: 671 VLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMC 730
Query: 420 GP 421
P
Sbjct: 731 PP 732
Score = 96 (38.9 bits), Expect = 0.00080, Sum P(4) = 0.00080
Identities = 37/124 (29%), Positives = 52/124 (41%)
Query: 442 GVLGHGDRISVST--PREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXGKLFT 499
G G D V+T P V +R V+ +CG H+ ++E G ++T
Sbjct: 892 GERGEKDASKVTTYPPGSVRFDCEVRAVQVSCGFHHSVVLME------------NGDVYT 939
Query: 500 WXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQ 559
+ +R PT V AL P+ QV+ G + T L G V+T GS GQ
Sbjct: 940 FGYGQHGQLGHGDVNSRGCPTLVQALPGPS-TQVTAGSNHTAVLVMDGQVFTFGSFSKGQ 998
Query: 560 LGDP 563
LG P
Sbjct: 999 LGRP 1002
Score = 73 (30.8 bits), Expect = 1.7e-05, Sum P(5) = 1.7e-05
Identities = 43/182 (23%), Positives = 73/182 (40%)
Query: 306 DVQNIACG-GRHAALV-TKQGEVFSWG--EELGGRLGH-GVDSDVSHPKLIDALKNINVE 360
D ++ G GR AL+ T G+++ G + LG + G V P + + K ++
Sbjct: 504 DEESAILGAGREFALMKTANGKIYYTGKYQSLGIKQGGPSAGKWVELP-ITKSPKIVHFS 562
Query: 361 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSC 419
+ G H +T S G S + PKK+ +EG V +C
Sbjct: 563 VGHDGSHALLVAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKII-KMEGKIVVCTAC 621
Query: 420 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
++V++ G+L+ FG + D S+ V LKG + A G HT +
Sbjct: 622 NNGSSSVISKDGELYMFGKDAI----YSDSSSL-----VSDLKGHFVTQVAMGKAHTCVL 672
Query: 480 VE 481
++
Sbjct: 673 MK 674
Score = 48 (22.0 bits), Expect = 1.7e-05, Sum P(5) = 1.7e-05
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
QV+ G + T L G V+T G GQ G
Sbjct: 661 QVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 690
Score = 42 (19.8 bits), Expect = 5.5e-08, Sum P(4) = 5.5e-08
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 744 VEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNN-- 801
V+ E+ +H TS+E +K + + E + +PL V L N
Sbjct: 1746 VDDSEHSGDSTHSHRWTSLELVKGTYTTDDSPSDIAEIRLDKVVPLKENVKYAVRLRNYG 1805
Query: 802 SKSSNPVFGST 812
S+++N G T
Sbjct: 1806 SRTANGDGGMT 1816
Score = 41 (19.5 bits), Expect = 5.5e-08, Sum P(4) = 5.5e-08
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 899 EALAVAGEETAKCRAAKDVIKSLTAQLKDM 928
+ ++ A EE C A V+ ++ KD+
Sbjct: 1862 QLVSKANEEDKNCSRALSVVSTVVRAAKDL 1891
Score = 40 (19.1 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 789 LPNGVSQGNALNNSKSSNPVFGSTKKFFSASLPGSRIM 826
LP Q +A+ NS S P + F A+ P S ++
Sbjct: 2572 LPTAGDQLSAILNSIQSRPNLPAPSIFDQAAKPPSSLV 2609
Score = 38 (18.4 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 896 QLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVR 938
QL++ LA G A KD+ + +L++ E+L A++
Sbjct: 2097 QLEKELANLGGVCAAALMKKDLALPIGNELEEDLEILEEAALQ 2139
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 155 (59.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 43/143 (30%), Positives = 72/143 (50%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV--A 363
DV GG H ++K G+V+S+G G LG D+ V +++ + ++V +
Sbjct: 68 DVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR--DTSVEGSEMVPGKVELQEKVVQVS 125
Query: 364 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPW 422
G+ HT A+T G ++ WG N G++G M +P ++ L+ + V V+ G
Sbjct: 126 AGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ--LD-VPVVKVASGND 182
Query: 423 HTAVVTSAGQLFTFGDGTFGVLG 445
H ++T+ G L+T G G G LG
Sbjct: 183 HLVMLTADGDLYTLGCGEQGQLG 205
Score = 137 (53.3 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 72/257 (28%), Positives = 108/257 (42%)
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTL 374
H + T+ G V + G+ G+LG G + + P L+ +++ V+ A G H C ++
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQAEAGGMHTVC-LSK 84
Query: 375 SGDMYTWGGSNCNF-GLLGHGN--EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
SG +Y++G CN G LG E S +P K+ L+ V VS G HTA +T G
Sbjct: 85 SGQVYSFG---CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAALTDDG 138
Query: 432 QLFTFGD--GTFGVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
++F +G GV+G + + S P +V + V+ A G H ++
Sbjct: 139 RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLV-MLTADGDLYT 195
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCV-----AALVEPNFCQVSCGHSLTVAL 543
G+L E LVP CV + F CG T A+
Sbjct: 196 LGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAI 255
Query: 544 TTTGHVYTMGSPVYGQL 560
+ GHVY G Y QL
Sbjct: 256 SHEGHVYGFGLSNYHQL 272
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 51/197 (25%), Positives = 86/197 (43%)
Query: 423 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 482
H + T G + T G G G LG G+ + + S+ V+A G HT + +
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPE-DVVQAEAGGMHTVCLSK- 84
Query: 483 MVGXXXXXXXXXGKLFTWX--XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLT 540
G+++++ + + +VP V ++ QVS G S T
Sbjct: 85 -----------SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSHT 131
Query: 541 VALTTTGHVYTMGS--PVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 596
ALT G V+ GS G +G +P +P +V+ + V ++A G+ H+ +LT
Sbjct: 132 AALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP---VVKVASGNDHLVMLT 188
Query: 597 SRTEVYTWGKGANGRLG 613
+ ++YT G G G+LG
Sbjct: 189 ADGDLYTLGCGEQGQLG 205
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 138 (53.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 42/148 (28%), Positives = 71/148 (47%)
Query: 319 LVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 376
++T+ G+V S G G+LG HG V P+ I+ K V +A G H A T SG
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQAIELHKE-KVVCIAAGLRHAVAATASG 58
Query: 377 DMYTWGGSNCNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSC---GPWHTAVVTSAGQ 432
++ WG + G L G + L+ K + G+ S C G H+A +T AG+
Sbjct: 59 IVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 433 LFTFGDGTFGVLGHGDRISVSTPREVDS 460
++ +G G L + + + P+++++
Sbjct: 119 VYVWGSNKHGQLAN-EAAFLPVPQKIEA 145
Score = 128 (50.1 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 49/149 (32%), Positives = 70/149 (46%)
Query: 295 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL---GGRLGHGVDSDV----SH 347
VP+A+E V IA G RHA T G VF WG L G RL G +
Sbjct: 30 VPQAIELHKE-KVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKE 88
Query: 348 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKLN 406
P + L+N V G H+ ++T +G++Y WG SN G L NE + L +P+K+
Sbjct: 89 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWG-SN-KHGQLA--NEAAFLPVPQKIE 144
Query: 407 GP-LEGIHVSSVSCGPWHTAVVTSAGQLF 434
+ V+++ G W T +V G L+
Sbjct: 145 AHCFQNEKVTAIWSG-W-THLVAQTGLLW 171
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 138 (53.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 42/148 (28%), Positives = 71/148 (47%)
Query: 319 LVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 376
++T+ G+V S G G+LG HG V P+ I+ K V +A G H A T SG
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQAIELHKE-KVVCIAAGLRHAVAATASG 58
Query: 377 DMYTWGGSNCNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSC---GPWHTAVVTSAGQ 432
++ WG + G L G + L+ K + G+ S C G H+A +T AG+
Sbjct: 59 IVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 433 LFTFGDGTFGVLGHGDRISVSTPREVDS 460
++ +G G L + + + P+++++
Sbjct: 119 VYVWGSNKHGQLAN-EAAFLPVPQKIEA 145
Score = 120 (47.3 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 42/119 (35%), Positives = 57/119 (47%)
Query: 295 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL---GGRLGHGVDSDV----SH 347
VP+A+E V IA G RHA T G VF WG L G RL G +
Sbjct: 30 VPQAIELHKE-KVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKE 88
Query: 348 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMS-LWLPKKL 405
P + L+N V G H+ ++T +G++Y WG SN G L NE + L +P+K+
Sbjct: 89 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWG-SN-KHGQLA--NEAAFLPVPQKI 143
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 138 (53.6 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 584 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 643
+++CG +H VL +VYT+G G +G+LGHGD + R P+LV+AL + + G++
Sbjct: 929 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPGPSTQ-VTAGSNH 987
Query: 644 TAAICL 649
TA + +
Sbjct: 988 TAVLLM 993
Score = 123 (48.4 bits), Expect = 9.6e-06, Sum P(4) = 9.6e-06
Identities = 31/83 (37%), Positives = 43/83 (51%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDY 590
QVSCG +V L G VYT G +GQLG N + PT V+ + ++ G
Sbjct: 929 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPGPS--TQVTAGSN 986
Query: 591 HVAVLTSRTEVYTWGKGANGRLG 613
H AVL +V+T+G + G+LG
Sbjct: 987 HTAVLLMDGQVFTFGSFSKGQLG 1009
Score = 108 (43.1 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 50/180 (27%), Positives = 76/180 (42%)
Query: 278 GGIHRSGSYAGVKMDSFVP---KAVESAVVLD---VQ-NIACGGRHAALVTKQGEVFSWG 330
G I+ +G Y + + P K VE V VQ ++ G HA LV + G VF G
Sbjct: 539 GKIYYTGKYQSLGIKQGGPSSGKWVELPVTKSPKIVQFSVGHDGSHALLVAEDGSVFFTG 598
Query: 331 EELGGRLGHGVDSDVSHPKLIDALKNINVEL-----VACGEHHTCAVTLSGDMYTWGGSN 385
G G S PK K I +E AC + VT G++Y +G +
Sbjct: 599 SASKGEDGESTKSR-RQPKPYKPKKMIKLETKMAVYTACNNGSSSIVTKDGELYMFG-KD 656
Query: 386 CNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
+ ++ + + L+G V+ V+ G HT V+T +G+++TFG G G
Sbjct: 657 AIY------SDSTCQV-----SDLKGHFVTQVAMGKAHTCVLTKSGEVWTFGVNNKGQCG 705
Score = 42 (19.8 bits), Expect = 3.0e-07, Sum P(4) = 3.0e-07
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 896 QLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVRNSNSFHS 945
QL++ LA G A KD+ + +L++ E+L +++ S HS
Sbjct: 2143 QLEKELAYLGSVCAAALMKKDLALPIGNELEEDLEILEEASLQVCKS-HS 2191
Score = 41 (19.5 bits), Expect = 3.8e-07, Sum P(4) = 3.8e-07
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 899 EALAVAGEETAKCRAAKDVIKSLTAQLKDM 928
+ L+ A EE C A V+ + KD+
Sbjct: 1881 QLLSKANEEDKNCSRALSVVSVVVRAAKDL 1910
Score = 39 (18.8 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 759 GTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNG 792
G+S KK SK+ KK++ + + P G
Sbjct: 3161 GSSAILKKKENEKDSKKTKKEKKKKEKAEVRPRG 3194
Score = 38 (18.4 bits), Expect = 3.0e-07, Sum P(4) = 3.0e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 989 NRSPSQTEASHCEATTKNKNRTMKAEPAQGDEWVEQDETGVY 1030
N SP + S + KNK +M EP ++ + E+ Y
Sbjct: 3074 NISPHGPDISKMGSINKNKVLSMLKEPPLPEKCEDGKESVSY 3115
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 155 (59.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 43/143 (30%), Positives = 72/143 (50%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV--A 363
DV GG H ++K G+V+S+G G LG D+ V +++ + ++V +
Sbjct: 68 DVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR--DTSVEGSEMVPGKVELQEKVVQVS 125
Query: 364 CGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSCGPW 422
G+ HT A+T G ++ WG N G++G M +P ++ L+ + V V+ G
Sbjct: 126 AGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ--LD-VPVVKVASGND 182
Query: 423 HTAVVTSAGQLFTFGDGTFGVLG 445
H ++T+ G L+T G G G LG
Sbjct: 183 HLVMLTADGDLYTLGCGEQGQLG 205
Score = 149 (57.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 74/260 (28%), Positives = 110/260 (42%)
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTL 374
H + T+ G V + G+ G+LG G + + P L+ +++ V+ A G H C ++
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQAEAGGMHTVC-LSK 84
Query: 375 SGDMYTWGGSNCNF-GLLGHGN--EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
SG +Y++G CN G LG E S +P K+ L+ V VS G HTA +T G
Sbjct: 85 SGQVYSFG---CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAALTDDG 138
Query: 432 QLFTFGD--GTFGVLGHGDRISVS-TPREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXX 488
++F +G GV+G + + S P +V + V+ A G H ++
Sbjct: 139 RVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLV-MLTADGDLYT 195
Query: 489 XXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCV-----AALVEPNFCQVSCGHSLTVAL 543
G+L E LVP CV + F CG T A+
Sbjct: 196 LGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAI 255
Query: 544 TTTGHVYTMGSPVYGQLGDP 563
+ GHVY G Y QLG P
Sbjct: 256 SHEGHVYGFGLSNYHQLGTP 275
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 51/197 (25%), Positives = 86/197 (43%)
Query: 423 HTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVEV 482
H + T G + T G G G LG G+ + + S+ V+A G HT + +
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPE-DVVQAEAGGMHTVCLSK- 84
Query: 483 MVGXXXXXXXXXGKLFTWX--XXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLT 540
G+++++ + + +VP V ++ QVS G S T
Sbjct: 85 -----------SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE--LQEKVVQVSAGDSHT 131
Query: 541 VALTTTGHVYTMGS--PVYGQLG--DPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLT 596
ALT G V+ GS G +G +P +P +V+ + V ++A G+ H+ +LT
Sbjct: 132 AALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP---VVKVASGNDHLVMLT 188
Query: 597 SRTEVYTWGKGANGRLG 613
+ ++YT G G G+LG
Sbjct: 189 ADGDLYTLGCGEQGQLG 205
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 152 (58.6 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 45/150 (30%), Positives = 72/150 (48%)
Query: 296 PKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK 355
PK VE + V+ IA G ++ A +T+ GE++ WG G LG G D P + LK
Sbjct: 408 PKMVE---IKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLK 464
Query: 356 NINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL--WLPKKLNGP----L 409
N V +AC H+ T SG MY WG S+ + + + + +L +++ P +
Sbjct: 465 NEVVSTIACSSTHSACYTESGKMYVWGQSDETGKIQAIPSPLPIHSYLDREIKSPNGGGV 524
Query: 410 EGIH-----VSSVSCGPWHTAVVTSAGQLF 434
G + ++CG AV+T G++F
Sbjct: 525 GGFFGGGGKIKQLACGQRCIAVLTQMGEVF 554
Score = 142 (55.0 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 62/230 (26%), Positives = 89/230 (38%)
Query: 414 VSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGV 473
V ++ G +TA +T G+L+ +G G LG GD I TP V LK AC
Sbjct: 416 VKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSS 475
Query: 474 WHTAAVVEVMVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLVPTCVAALVE-PN--- 529
H+A E GK++ W + + + ++ PN
Sbjct: 476 THSACYTE------------SGKMYVWGQSDETGKIQAIPSPLPIHSYLDREIKSPNGGG 523
Query: 530 ---FC-------QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTK 579
F Q++CG LT G V+ P G P +P R L
Sbjct: 524 VGGFFGGGGKIKQLACGQRCIAVLTQMGEVFMWEIP-----GIP-----IPLR--NALEN 571
Query: 580 NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEAL 629
+ V I G++H+ LT EV T G+ G+LG TD N P +V+ L
Sbjct: 572 HSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLGR--TDAENEPGIVKQL 619
Score = 123 (48.4 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 565 ANGKLPTRVEGKLTK-NFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFP 623
++ L T K+ + V+ IA G + A LT E+Y WG +G LG GDT DR P
Sbjct: 398 SSSSLQTTCTPKMVEIKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTP 457
Query: 624 SLVEALKDKQVKSIVCGTSFTA 645
+ V LK++ V +I C ++ +A
Sbjct: 458 TRVIRLKNEVVSTIACSSTHSA 479
Score = 86 (35.3 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 299 VESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDS 343
+E++ + ++ +A G H L+T+ G V++WG G+LG+ VD+
Sbjct: 327 LENSPLNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYLVDT 371
Score = 75 (31.5 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 25/82 (30%), Positives = 36/82 (43%)
Query: 524 ALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLG------DPKANGKLPTRVEGKL 577
AL + + G+ V LT +G V T+G GQLG +P +L +G
Sbjct: 568 ALENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLGRTDAENEPGIVKQLSFDPDGLN 627
Query: 578 TKNFVEEIACGDYHVAVLTSRT 599
+ FV IA G++H L T
Sbjct: 628 SDEFVVSIAAGEFHSVALVENT 649
Score = 75 (31.5 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 326 VFSWGEELGGRLGHG--VDSDVSHPKLIDALKNIN--VELVACGEHHTCAVTLSGDMYTW 381
VF++G G LG G D P+ ++ I+ V+ VACG +HT VT +Y
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYIC 62
Query: 382 G 382
G
Sbjct: 63 G 63
Score = 75 (31.5 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 433 LFTFGDGTFGVLGHGDRI--SVSTPREVDSLKGL--RTVRAACGVWHTAAVVE 481
+FTFG G+ G LG G + TP++V+ + R + ACG +HT V +
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTD 55
Score = 70 (29.7 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 359 VELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGH 393
++ VA G +H +T G+++TWG SN N G LG+
Sbjct: 335 IKQVALGNYHIVLLTEGGNVWTWG-SNSN-GQLGY 367
Score = 70 (29.7 bits), Expect = 4.5e-06, Sum P(4) = 4.5e-06
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 378 MYTWG-GSNCNFGLLGHGNEMSLWLPKKLNGPLE-GIHVSSVSCGPWHTAVVTSAGQLFT 435
++T+G GSN GL G + + P+K+N E V V+CG +HT VT L+
Sbjct: 3 VFTFGHGSNGALGL-GKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYI 61
Query: 436 FG 437
G
Sbjct: 62 CG 63
Score = 66 (28.3 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 406 NGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 446
N PL I V+ G +H ++T G ++T+G + G LG+
Sbjct: 329 NSPLNTI--KQVALGNYHIVLLTEGGNVWTWGSNSNGQLGY 367
Score = 61 (26.5 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
QV+ G+ V LT G+V+T GS GQLG
Sbjct: 337 QVALGNYHIVLLTEGGNVWTWGSNSNGQLG 366
Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 296 PKAVESAVVLD--VQNIACGGRHAALVTKQGEVFSWG 330
P+ V +D V+ +ACG H VT ++ G
Sbjct: 27 PQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYICG 63
Score = 40 (19.1 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 15/80 (18%), Positives = 33/80 (41%)
Query: 737 NQGFNEAVEHGENFVSRSHVQFGTSM--ESLKKVESGSSKRNKKQEFNRTRGLPLPNGVS 794
N N +E+ N + ++ T+ +++ + + ++ N N N +
Sbjct: 1142 NNNQNNNLENNNNNNNNNNTTTTTTTPNDNINDINNNNNNNNNNNNNNNN------NNNN 1195
Query: 795 QGNALNNSKSSNPVFGSTKK 814
N NN+ ++N + ST K
Sbjct: 1196 NNNNNNNNNNNNNLTNSTIK 1215
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 159 (61.0 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 92/387 (23%), Positives = 156/387 (40%)
Query: 264 VFIWGE-CTGDGILGGGIHRSGSYAGVKMDSFVPK-AVESAVVLDVQNIACGGRHAALV- 320
V+ WG TG + G IH A + +DSF+P+ A + VV G+ +LV
Sbjct: 89 VWGWGNNYTGQ-LDFGNIHEMTKPARIPLDSFIPEMAPDDYVVQFASADFLSGKARSLVA 147
Query: 321 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 380
T+QG++ + E R+ + + H L N+ + + H +T G +Y
Sbjct: 148 TRQGQLHEYYWE---RISNTRSEFIQHRHY--EL-NVTIVQLLSDYRHAFILTEEGGIYG 201
Query: 381 WGGSNCNFGLLGHGNEMSLWLPKKLNG---P--LE-GIHVSSVSCGPWHTAVVTSAGQLF 434
WG N + G LG G+ P +L P LE G + ++ + T+ G ++
Sbjct: 202 WG-FNIS-GELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVY 259
Query: 435 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA-VVEVMVGXXXXXXXX 493
+G G LG D E D L + WH +++V+VG
Sbjct: 260 VWGFNYRGRLGLDD--------EQDRLHPVELSWDFFPEWHPDDYIIQVVVGDRHTLALT 311
Query: 494 X-GKLFTWXXXXXXXXXXXXKEARLVPTCVA-----ALVEPN--FCQVSCGHSLTVALTT 545
G ++ W ++ R P + L+E N ++ G + ++A T
Sbjct: 312 QLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTE 371
Query: 546 TGHVYTMGSPVYGQLGDP--KANGKLPTR--VEGKLTK-NFVEEIACGDYHVAVLTSRTE 600
G +Y G+ GDP + + L T G + + + E+ G H T +
Sbjct: 372 QGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPDHTLARTEQGY 431
Query: 601 VYTWGKGANGRLGHGDTDDRNFPSLVE 627
+Y WG+ G+LG GD + P+L++
Sbjct: 432 IYAWGRNYYGQLGLGDRRIQRQPALLD 458
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 159 (61.0 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 92/387 (23%), Positives = 156/387 (40%)
Query: 264 VFIWGE-CTGDGILGGGIHRSGSYAGVKMDSFVPK-AVESAVVLDVQNIACGGRHAALV- 320
V+ WG TG + G IH A + +DSF+P+ A + VV G+ +LV
Sbjct: 89 VWGWGNNYTGQ-LDFGNIHEMTKPARIPLDSFIPEMAPDDYVVQFASADFLSGKARSLVA 147
Query: 321 TKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYT 380
T+QG++ + E R+ + + H L N+ + + H +T G +Y
Sbjct: 148 TRQGQLHEYYWE---RISNTRSEFIQHRHY--EL-NVTIVQLLSDYRHAFILTEEGGIYG 201
Query: 381 WGGSNCNFGLLGHGNEMSLWLPKKLNG---P--LE-GIHVSSVSCGPWHTAVVTSAGQLF 434
WG N + G LG G+ P +L P LE G + ++ + T+ G ++
Sbjct: 202 WG-FNIS-GELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVY 259
Query: 435 TFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAA-VVEVMVGXXXXXXXX 493
+G G LG D E D L + WH +++V+VG
Sbjct: 260 VWGFNYRGRLGLDD--------EQDRLHPVELSWDFFPEWHPDDYIIQVVVGDRHTLALT 311
Query: 494 X-GKLFTWXXXXXXXXXXXXKEARLVPTCVA-----ALVEPN--FCQVSCGHSLTVALTT 545
G ++ W ++ R P + L+E N ++ G + ++A T
Sbjct: 312 QLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTE 371
Query: 546 TGHVYTMGSPVYGQLGDP--KANGKLPTR--VEGKLTK-NFVEEIACGDYHVAVLTSRTE 600
G +Y G+ GDP + + L T G + + + E+ G H T +
Sbjct: 372 QGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPDHTLARTEQGY 431
Query: 601 VYTWGKGANGRLGHGDTDDRNFPSLVE 627
+Y WG+ G+LG GD + P+L++
Sbjct: 432 IYAWGRNYYGQLGLGDRRIQRQPALLD 458
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 150 (57.9 bits), Expect = 9.2e-08, Sum P(4) = 9.2e-08
Identities = 39/105 (37%), Positives = 50/105 (47%)
Query: 515 ARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKL-PTRV 573
A L P + QV+CG TV LT G VYT GS YGQLG P RV
Sbjct: 953 APLAPQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPVSGPVRV 1012
Query: 574 EGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTD 618
+ + ++A G H +LTS+ VYT+G G+LG +D
Sbjct: 1013 Q---VPGAISQVAAGSNHTVLLTSKGMVYTFGNYQKGQLGRLPSD 1054
Score = 97 (39.2 bits), Expect = 9.2e-08, Sum P(4) = 9.2e-08
Identities = 48/181 (26%), Positives = 74/181 (40%)
Query: 278 GGIHRSGSYA--GVKMDSFVP--KAVESAV--VLDVQNIACG--GRHAALVTKQGEVFSW 329
G ++ G A G+K P K E + ++ ++A G G HA LV G VF
Sbjct: 616 GRVYYYGKSAALGLKCVGRTPTLKLTELVISKAANIVHVAVGHDGIHALLVNDDGTVFFA 675
Query: 330 GEELGGRLGHGVDSDVSHPKLIDALKNINVE--LV---ACGEHHTCAVTLSGDMYTWGGS 384
G G G + PK + K ++ +V AC + VT +G + +G
Sbjct: 676 GTARRGEDGDS-SKNRRQPKAVKPKKMTKIDGHVVVHAACNNGTSAFVTKTGKLIMYGKD 734
Query: 385 NCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVL 444
+ +G +E+ LE HV+ V+ G H + + GQLF+FG G
Sbjct: 735 TAHCDAMGFVSEL-----------LEQ-HVTKVALGKAHCVALNAKGQLFSFGLNNKGQC 782
Query: 445 G 445
G
Sbjct: 783 G 783
Score = 77 (32.2 bits), Expect = 8.0e-05, Sum P(5) = 8.0e-05
Identities = 38/157 (24%), Positives = 61/157 (38%)
Query: 292 DSFVPKAVESA--VVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 349
+SF PK +DV +ACG + G V+ +G+ LG K
Sbjct: 582 NSFEPKLPAPCRDADVDVMGMACGKEFGLVRASNGRVYYYGKSAA--LGLKCVGRTPTLK 639
Query: 350 LIDAL--KNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGN----EMSLWLPK 403
L + + K N+ VA G A+ ++ D + G G + + PK
Sbjct: 640 LTELVISKAANIVHVAVGHDGIHALLVNDDGTVFFAGTARRGEDGDSSKNRRQPKAVKPK 699
Query: 404 KLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGT 440
K+ ++G V +C +A VT G+L +G T
Sbjct: 700 KMT-KIDGHVVVHAACNNGTSAFVTKTGKLIMYGKDT 735
Score = 44 (20.5 bits), Expect = 9.2e-08, Sum P(4) = 9.2e-08
Identities = 18/55 (32%), Positives = 20/55 (36%)
Query: 616 DTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSMCSGCRIPFNF 670
D DD VEAL + CG F C V + SG RI F F
Sbjct: 4986 DADDMCMICFVEALSCAPSIHLECGHVFHYHCC-----KAVLEKRWSGPRITFGF 5035
Score = 42 (19.8 bits), Expect = 9.2e-08, Sum P(4) = 9.2e-08
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 87 KEYQSFSLIYNDRSLDLICKDKDEAEV 113
+E ++ L +D SL IC ++D+ V
Sbjct: 501 REGLNYVLFTDDDSLHAICSNRDDTLV 527
Score = 40 (19.1 bits), Expect = 1.0e-06, Sum P(5) = 1.0e-06
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 1051 KKFSEKQAEQWWAANRARVYQQ 1072
+K +++ E W AN A V +Q
Sbjct: 4467 RKEAQRAKEDWELANLAHVLKQ 4488
Score = 40 (19.1 bits), Expect = 1.0e-06, Sum P(5) = 1.0e-06
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 886 QEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQ--LKDMAEMLPVGAVRNSNSF 943
Q+ EL+R ++ +L +A +A +++S+T L D+ V ++ N
Sbjct: 4025 QKHELDRLRAAMRRSLRIAACRIYALQALNWLLRSVTQGVCLHDLMWWF-VSSL-NPTGG 4082
Query: 944 HSSPTPAWDVSSAAIEQP 961
H + S A+E P
Sbjct: 4083 HQPVERGEEASEPALEHP 4100
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 134 (52.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 41/134 (30%), Positives = 63/134 (47%)
Query: 319 LVTKQGEVFSWGEELGGRLG--HGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSG 376
++T+ G+V S G G+LG HG V P+ I+ K V +A G H A T SG
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCVV-PQAIELHKE-KVVCIAAGLRHAVAATASG 58
Query: 377 DMYTWGGSNCNFGL-LGHGNEMSLWLPKKLNGPLEGIHVSSVSC---GPWHTAVVTSAGQ 432
++ WG + G L G + L+ K + G+ S C G H+A +T AG+
Sbjct: 59 IVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 433 LFTFGDGTFGVLGH 446
++ +G G L +
Sbjct: 119 VYVWGSNKHGQLAN 132
Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 33/97 (34%), Positives = 45/97 (46%)
Query: 295 VPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEEL---GGRLGHGVDSDV----SH 347
VP+A+E V IA G RHA T G VF WG L G RL G +
Sbjct: 30 VPQAIELHKE-KVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKE 88
Query: 348 PKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGS 384
P + L+N V G H+ ++T +G++Y WG +
Sbjct: 89 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSN 125
Score = 101 (40.6 bits), Expect = 0.00037, P = 0.00037
Identities = 36/114 (31%), Positives = 52/114 (45%)
Query: 543 LTTTGHVYTMGSPVYGQLGDPKANGK--LPTRVEGKLTKNFVEEIACGDYHVAVLTSRTE 600
LT G V + GS +GQLG P + +P +E L K V IA G H T+
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIE--LHKEKVVCIAAGLRHAVAATASGI 59
Query: 601 VYTWGKG---ANGRLGHGDTDDRNF----PSLVEALKDKQVKSIVCGTSFTAAI 647
V+ WG G RL G T F PS V L++ + ++ G+ +A++
Sbjct: 60 VFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASL 113
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 143 (55.4 bits), Expect = 1.2e-07, Sum P(4) = 1.2e-07
Identities = 32/95 (33%), Positives = 55/95 (57%)
Query: 558 GQLGDPKANGKLPTRVEGKLTKNF---VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 614
G+ G+ A+ K+ T G + + +++CG +H VL +VYT+G G +G+LGH
Sbjct: 878 GERGEKDAS-KITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGH 936
Query: 615 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 649
GD + R P+LV+AL + + G++ TAA+ +
Sbjct: 937 GDVNSRGCPTLVQALPGPSTQ-VTAGSNHTAALLM 970
Score = 120 (47.3 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 30/83 (36%), Positives = 42/83 (50%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDY 590
QVSCG +V L G VYT G +GQLG N + PT V+ + ++ G
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS--TQVTAGSN 963
Query: 591 HVAVLTSRTEVYTWGKGANGRLG 613
H A L +V+T+G + G+LG
Sbjct: 964 HTAALLMDGQVFTFGSFSKGQLG 986
Score = 117 (46.2 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 28/64 (43%), Positives = 36/64 (56%)
Query: 417 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 476
VSCG H+ V+ G ++TFG G G LGHGD S P V +L G T + G HT
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHT 965
Query: 477 AAVV 480
AA++
Sbjct: 966 AALL 969
Score = 105 (42.0 bits), Expect = 0.00070, Sum P(4) = 0.00070
Identities = 40/128 (31%), Positives = 56/128 (43%)
Query: 438 DGTFGVLGHGDRISVST--PREVDSLKGLRTVRAACGVWHTAAVVEVMVGXXXXXXXXXG 495
DG+ G G D ++T P V LR V+ +CG H+ ++E G
Sbjct: 875 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME------------NG 921
Query: 496 KLFTWXXXXXXXXXXXXKEARLVPTCVAALVEPNFCQVSCGHSLTVALTTTGHVYTMGSP 555
++T+ +R PT V AL P+ QV+ G + T AL G V+T GS
Sbjct: 922 DVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS-TQVTAGSNHTAALLMDGQVFTFGSF 980
Query: 556 VYGQLGDP 563
GQLG P
Sbjct: 981 SKGQLGRP 988
Score = 101 (40.6 bits), Expect = 1.2e-07, Sum P(4) = 1.2e-07
Identities = 45/179 (25%), Positives = 72/179 (40%)
Query: 278 GGIHRSGSYAGVKMDSFVPKA---VESAVVLD--VQNIACG--GRHAALVTKQGEVFSWG 330
G I+ +G Y + + P A VE + + + + G G HA LV + G +F G
Sbjct: 510 GKIYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTG 569
Query: 331 EELGGRLGHGV----DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
G G S PK I ++ V AC + ++ G++Y +G
Sbjct: 570 SASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI 629
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
+ + SL L+G V+ V+ G HT V+ G+++TFG G G
Sbjct: 630 ------YSDSSSLVTD------LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 96 (38.9 bits), Expect = 3.7e-07, Sum P(4) = 3.7e-07
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 311 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 370
AC +++++K GE++ +G++ + SD S L+ LK V VA G+ HTC
Sbjct: 606 ACNNGSSSVISKDGELYMFGKD-------AIYSDSS--SLVTDLKGHFVTQVAMGKAHTC 656
Query: 371 AVTLSGDMYTWGGSN---C-------NFGLLGHGNE-MSLWLPKKLNGPLEGIHVSSVSC 419
+ +G+++T+G +N C N G G G E M+ + + L L+ S+ C
Sbjct: 657 VLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMC 716
Query: 420 GP 421
P
Sbjct: 717 PP 718
Score = 70 (29.7 bits), Expect = 7.5e-05, Sum P(5) = 7.5e-05
Identities = 43/182 (23%), Positives = 73/182 (40%)
Query: 306 DVQNIACG-GRHAALV-TKQGEVFSWG--EELGGRLGH-GVDSDVSHPKLIDALKNINVE 360
D ++ G GR AL+ T G+++ G + LG + G V P + + K ++
Sbjct: 490 DEESAVLGAGREFALMKTANGKIYYTGKYQSLGIKQGGPSAGKWVELP-ITKSPKIVHFS 548
Query: 361 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSC 419
+ G H +T S G S + PKK+ +EG V +C
Sbjct: 549 VGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKII-KMEGKIVVYTAC 607
Query: 420 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
++V++ G+L+ FG + D S+ T LKG + A G HT +
Sbjct: 608 NNGSSSVISKDGELYMFGKDAI----YSDSSSLVT-----DLKGHFVTQVAMGKAHTCVL 658
Query: 480 VE 481
++
Sbjct: 659 MK 660
Score = 48 (22.0 bits), Expect = 7.5e-05, Sum P(5) = 7.5e-05
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
QV+ G + T L G V+T G GQ G
Sbjct: 647 QVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 44 (20.5 bits), Expect = 1.2e-07, Sum P(4) = 1.2e-07
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 899 EALAVAGEETAKCRAAKDVIKSLTAQLKDM 928
+ L+ A EE C A V+ ++ KD+
Sbjct: 1856 QLLSKANEEDKNCSRALSVVSTVVRAAKDL 1885
Score = 42 (19.8 bits), Expect = 1.2e-07, Sum P(4) = 1.2e-07
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 744 VEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNN-- 801
V+ E+ +H TS+E +K + + E + +PL V L N
Sbjct: 1740 VDDSEHAGDSTHSHRWTSLELVKGTYTTDDSPSDIAEIRLDKVVPLKENVKYAVRLRNYG 1799
Query: 802 SKSSNPVFGST 812
S+++N G T
Sbjct: 1800 SRTANGDGGMT 1810
Score = 38 (18.4 bits), Expect = 4.6e-07, Sum P(4) = 4.6e-07
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 896 QLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVR 938
QL++ LA G A KD+ + +L++ E+L A++
Sbjct: 2119 QLEKELANLGGVCAAALMKKDLALPIGNELEEDLEILEEAALQ 2161
>DICTYBASE|DDB_G0286231 [details] [associations]
symbol:DDB_G0286231 "FYVE-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0046872
"metal ion binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
dictyBase:DDB_G0286231 GO:GO:0046872 EMBL:AAFI02000085
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 eggNOG:NOG247076
RefSeq:XP_637797.1 ProteinModelPortal:Q54M34 PRIDE:Q54M34
EnsemblProtists:DDB0305107 GeneID:8625511 KEGG:ddi:DDB_G0286231
InParanoid:Q54M34 OMA:CDECYRM ProtClustDB:CLSZ2430113
Uniprot:Q54M34
Length = 88
Score = 131 (51.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 651 KWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCD 710
KWV C C+ F +RH+C CGLV+C+ CSS ++ + N P RVCD
Sbjct: 22 KWVEDSHCHNCHKCKASFTLLNRRHHCRRCGLVFCNRCSSNEAKIPQLNYN-FVPVRVCD 80
Query: 711 NCF 713
C+
Sbjct: 81 ECY 83
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 139 (54.0 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 31/95 (32%), Positives = 54/95 (56%)
Query: 558 GQLGDPKANGKLPTRVEGKLTKNF---VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 614
G+ G+ A+ K+ T G + + +++CG +H VL +VYT+G G +G+LGH
Sbjct: 791 GERGEKDAS-KITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGH 849
Query: 615 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 649
GD + R P+LV+AL + + G++ TA + +
Sbjct: 850 GDVNSRGCPTLVQALPGPSTQ-VTAGSNHTAVLLM 883
Score = 124 (48.7 bits), Expect = 8.2e-06, Sum P(4) = 8.2e-06
Identities = 31/83 (37%), Positives = 43/83 (51%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDY 590
QVSCG +V L G VYT G +GQLG N + PT V+ + ++ G
Sbjct: 819 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS--TQVTAGSN 876
Query: 591 HVAVLTSRTEVYTWGKGANGRLG 613
H AVL +V+T+G + G+LG
Sbjct: 877 HTAVLLMDGQVFTFGSFSKGQLG 899
Score = 113 (44.8 bits), Expect = 0.00030, Sum P(4) = 0.00030
Identities = 27/64 (42%), Positives = 35/64 (54%)
Query: 417 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 476
VSCG H+ V+ G ++TFG G G LGHGD S P V +L G T + G HT
Sbjct: 820 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPST-QVTAGSNHT 878
Query: 477 AAVV 480
A ++
Sbjct: 879 AVLL 882
Score = 101 (40.6 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 45/179 (25%), Positives = 72/179 (40%)
Query: 278 GGIHRSGSYAGVKMDSFVPKA---VESAVVLD--VQNIACG--GRHAALVTKQGEVFSWG 330
G I+ +G Y + + P A VE + + + + G G HA LV + G +F G
Sbjct: 423 GKIYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTG 482
Query: 331 EELGGRLGHGV----DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
G G S PK I ++ V AC + ++ G++Y +G
Sbjct: 483 SASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI 542
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
+ + SL L+G V+ V+ G HT V+ G+++TFG G G
Sbjct: 543 ------YSDSSSLVTD------LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 589
Score = 96 (38.9 bits), Expect = 7.9e-07, Sum P(4) = 7.9e-07
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 311 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 370
AC +++++K GE++ +G++ + SD S L+ LK V VA G+ HTC
Sbjct: 519 ACNNGSSSVISKDGELYMFGKD-------AIYSDSS--SLVTDLKGHFVTQVAMGKAHTC 569
Query: 371 AVTLSGDMYTWGGSN---C-------NFGLLGHGNE-MSLWLPKKLNGPLEGIHVSSVSC 419
+ +G+++T+G +N C N G G G E M+ + + L L+ S+ C
Sbjct: 570 VLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMC 629
Query: 420 GP 421
P
Sbjct: 630 PP 631
Score = 70 (29.7 bits), Expect = 0.00015, Sum P(5) = 0.00015
Identities = 43/182 (23%), Positives = 73/182 (40%)
Query: 306 DVQNIACG-GRHAALV-TKQGEVFSWG--EELGGRLGH-GVDSDVSHPKLIDALKNINVE 360
D ++ G GR AL+ T G+++ G + LG + G V P + + K ++
Sbjct: 403 DEESAVLGAGREFALMKTANGKIYYTGKYQSLGIKQGGPSAGKWVELP-ITKSPKIVHFS 461
Query: 361 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSC 419
+ G H +T S G S + PKK+ +EG V +C
Sbjct: 462 VGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKII-KMEGKIVVYTAC 520
Query: 420 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
++V++ G+L+ FG + D S+ T LKG + A G HT +
Sbjct: 521 NNGSSSVISKDGELYMFGKDAI----YSDSSSLVT-----DLKGHFVTQVAMGKAHTCVL 571
Query: 480 VE 481
++
Sbjct: 572 MK 573
Score = 48 (22.0 bits), Expect = 0.00015, Sum P(5) = 0.00015
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
QV+ G + T L G V+T G GQ G
Sbjct: 560 QVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 589
Score = 44 (20.5 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 899 EALAVAGEETAKCRAAKDVIKSLTAQLKDM 928
+ L+ A EE C A V+ ++ KD+
Sbjct: 1769 QLLSKANEEDKNCSRALSVVSTVVRAAKDL 1798
Score = 42 (19.8 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 744 VEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNN-- 801
V+ E+ +H TS+E +K + + E + +PL V L N
Sbjct: 1653 VDDSEHAGDSTHSHRWTSLELVKGTYTTDDSPSDIAEIRLDKVVPLKENVKYAVRLRNYG 1712
Query: 802 SKSSNPVFGST 812
S+++N G T
Sbjct: 1713 SRTANGDGGMT 1723
Score = 38 (18.4 bits), Expect = 9.9e-07, Sum P(4) = 9.9e-07
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 896 QLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVR 938
QL++ LA G A KD+ + +L++ E+L A++
Sbjct: 2032 QLEKELANLGGVCAAALMKKDLALPIGNELEEDLEILEEAALQ 2074
>WB|WBGene00004457 [details] [associations]
symbol:rpm-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0050807 "regulation of synapse organization" evidence=IGI;IMP]
[GO:0040011 "locomotion" evidence=IGI] [GO:0043409 "negative
regulation of MAPK cascade" evidence=IGI] [GO:0031647 "regulation
of protein stability" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0031594
"neuromuscular junction" evidence=IDA] [GO:0045202 "synapse"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0031435 "mitogen-activated protein kinase kinase
kinase binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR027047 Pfam:PF00643 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
GO:GO:0018991 GO:GO:0006915 GO:GO:0006355 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0031594 GO:GO:0010171
GO:GO:0040011 GO:GO:0006351 GO:GO:0031647 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 GO:GO:0043409 InterPro:IPR012983 Pfam:PF08005
GO:GO:0050807 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 eggNOG:NOG240798 EMBL:FO080217 PIR:T29165
RefSeq:NP_505267.1 ProteinModelPortal:Q17551 SMR:Q17551
STRING:Q17551 PaxDb:Q17551 EnsemblMetazoa:C01B7.6 GeneID:179259
KEGG:cel:CELE_C01B7.6 UCSC:C01B7.6 CTD:179259 WormBase:C01B7.6
HOGENOM:HOG000016145 InParanoid:Q17551 OMA:LLSILHW NextBio:904596
Uniprot:Q17551
Length = 3766
Score = 131 (51.2 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 407 GPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRT 466
GP + + VSSVSCG +HT ++ S ++FTFG G LG GD +S +TP++V
Sbjct: 763 GPHD-VKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTVI 821
Query: 467 VRAACGVWHT 476
V+ A G HT
Sbjct: 822 VQVAAGSNHT 831
Score = 115 (45.5 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 582 VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGT 641
V ++CG++H +L S V+T+G +G+LG GDT +N P V D + + G+
Sbjct: 769 VSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTVIVQVAAGS 828
Query: 642 SFT 644
+ T
Sbjct: 829 NHT 831
Score = 97 (39.2 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 312 CGGRHA-ALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 370
C H V++ G++F +GG H + +VS ++++ L N+ + +A G+ H
Sbjct: 575 CASGHVYGYVSENGKIF-----MGGL--HTMRVNVSS-QMLNGLDNVMISSLALGKSHGV 626
Query: 371 AVTLSGDMYTWGGSNCN 387
AVT +G ++TWG +N N
Sbjct: 627 AVTRNGHLFTWGLNNMN 643
Score = 89 (36.4 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 35/121 (28%), Positives = 52/121 (42%)
Query: 338 GHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG-HGNE 396
GHG + V K L+ LV V SG +Y + N + G H
Sbjct: 544 GHGWIASVDDKKRNGRLRR----LVPSNRRKIVHVCASGHVYGYVSENGKIFMGGLHTMR 599
Query: 397 MSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISV-STP 455
+++ + LNG L+ + +SS++ G H VT G LFT+G G + S S+P
Sbjct: 600 VNV-SSQMLNG-LDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVESTSTTSSP 657
Query: 456 R 456
R
Sbjct: 658 R 658
Score = 66 (28.3 bits), Expect = 0.00027, Sum P(4) = 0.00027
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 266 IWGECTGDG-ILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQG 324
++G + +G I GG+H V + S + +++ ++ ++A G H VT+ G
Sbjct: 580 VYGYVSENGKIFMGGLHTMR----VNVSSQMLNGLDNVMI---SSLALGKSHGVAVTRNG 632
Query: 325 EVFSWG 330
+F+WG
Sbjct: 633 HLFTWG 638
Score = 58 (25.5 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDP---KAN-GKLPTRVEG 575
QV+ G + T+ G V+T G+ GQL P KA +P +V G
Sbjct: 823 QVAAGSNHTILRANDGSVFTFGAFGKGQLARPAGEKAGWNAIPEKVSG 870
Score = 37 (18.1 bits), Expect = 2.8e-07, Sum P(4) = 2.8e-07
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 671 KRKRHNCYNCGLV--YCHTCSSK 691
K KR+ Y CGL+ C S+
Sbjct: 3110 KSKRNYSYCCGLMSLLVRICDSR 3132
Score = 37 (18.1 bits), Expect = 3.0e-05, Sum P(4) = 3.0e-05
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 548 HVYTMGSPVYGQLGDPKANGKLPTRVEG 575
H + + + + G D ANGK +G
Sbjct: 1149 HWHVVSAKISGPSSDCGANGKRHVECDG 1176
>GENEDB_PFALCIPARUM|MAL7P1.38 [details] [associations]
symbol:MAL7P1.38 "regulator of chromosome
condensation protein, putative" species:5833 "Plasmodium
falciparum" [GO:0005634 "nucleus" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0030261 "chromosome
condensation" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0003682
GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030261 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012
EMBL:AL844506 RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 113 (44.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWG-EELG--GRLGH--GVDSDVSH-PKLIDALKNINV 359
D+ + CG H + T +++S+G ++G GR + G+ D+ H P LI+ +
Sbjct: 40 DIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGI-KDLEHSPTLINFTFPSKI 98
Query: 360 ELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG 392
+ + CG++HT + +G +Y GG G+LG
Sbjct: 99 KKITCGDNHTAILLENGKVYITGGFRDYCGVLG 131
Score = 92 (37.4 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 26/90 (28%), Positives = 39/90 (43%)
Query: 522 VAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS-PVYGQLGDPKANGKLPTRVEGKLTKN 580
+ L + Q+ G S TV L +Y G+ + G D A P ++ N
Sbjct: 310 IQELSQKKINQLCGGQSFTVCLLNNNDLYIWGNREILGMEYDDDAYS--PLELDFFKKNN 367
Query: 581 F-VEEIACGDYHVAVLTSRTEVYTWGKGAN 609
+ V+ I CG H VLT +++ WG G N
Sbjct: 368 YTVKNITCGTDHCLVLTDNGKLFGWGTGGN 397
Score = 91 (37.1 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 34/120 (28%), Positives = 53/120 (44%)
Query: 527 EPNFCQVSCGHSLT-VALTTTGHVYTMGSPVYGQLG-DPKANG-KLPTRVEGKLTKNFVE 583
E F + CG + T V L + VY +G YG G K N K +++ +L++ +
Sbjct: 261 ENKFENIYCGGNNTYVQLENSLDVYGIGRNAYGSCGVSSKDNIIKKFEKIQ-ELSQKKIN 319
Query: 584 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ--VKSIVCGT 641
++ G L + ++Y WG LG DD P ++ K VK+I CGT
Sbjct: 320 QLCGGQSFTVCLLNNNDLYIWGN--REILGMEYDDDAYSPLELDFFKKNNYTVKNITCGT 377
Score = 89 (36.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 32/107 (29%), Positives = 50/107 (46%)
Query: 347 HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN-FGLLGHGNEMS-----LW 400
+P I L N +++ V CG HT T +Y++G CN G+LG S
Sbjct: 30 NPTAIPNLPN-DIDEVICGSMHTIIKTTDDKLYSFG---CNDMGVLGRKTYSSGIKDLEH 85
Query: 401 LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF-TFGDGTF-GVLG 445
P +N + ++CG HTA++ G+++ T G + GVLG
Sbjct: 86 SPTLINFTFPS-KIKKITCGDNHTAILLENGKVYITGGFRDYCGVLG 131
Score = 85 (35.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 34/122 (27%), Positives = 53/122 (43%)
Query: 579 KNFVEEIACGDYHVAV-LTSRTEVYTWGKGANGRLGHGDTDD--RNFPSLVEALKDKQVK 635
+N E I CG + V L + +VY G+ A G G D+ + F + E L K++
Sbjct: 261 ENKFENIYCGGNNTYVQLENSLDVYGIGRNAYGSCGVSSKDNIIKKFEKIQE-LSQKKIN 319
Query: 636 SIVCGTSFTAAIC----LHKW----VSGV--DQSMCSGCRIPFNFKRKRHNCYN--CGLV 683
+ G SFT + L+ W + G+ D S + F FK+ + N CG
Sbjct: 320 QLCGGQSFTVCLLNNNDLYIWGNREILGMEYDDDAYSPLELDF-FKKNNYTVKNITCGTD 378
Query: 684 YC 685
+C
Sbjct: 379 HC 380
>UNIPROTKB|C0H4M6 [details] [associations]
symbol:MAL7P1.38 "Regulator of chromosome condensation,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS] [GO:0030261
"chromosome condensation" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0003682 GO:GO:0007049
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0030261
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012 EMBL:AL844506
RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 113 (44.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWG-EELG--GRLGH--GVDSDVSH-PKLIDALKNINV 359
D+ + CG H + T +++S+G ++G GR + G+ D+ H P LI+ +
Sbjct: 40 DIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGI-KDLEHSPTLINFTFPSKI 98
Query: 360 ELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG 392
+ + CG++HT + +G +Y GG G+LG
Sbjct: 99 KKITCGDNHTAILLENGKVYITGGFRDYCGVLG 131
Score = 92 (37.4 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 26/90 (28%), Positives = 39/90 (43%)
Query: 522 VAALVEPNFCQVSCGHSLTVALTTTGHVYTMGS-PVYGQLGDPKANGKLPTRVEGKLTKN 580
+ L + Q+ G S TV L +Y G+ + G D A P ++ N
Sbjct: 310 IQELSQKKINQLCGGQSFTVCLLNNNDLYIWGNREILGMEYDDDAYS--PLELDFFKKNN 367
Query: 581 F-VEEIACGDYHVAVLTSRTEVYTWGKGAN 609
+ V+ I CG H VLT +++ WG G N
Sbjct: 368 YTVKNITCGTDHCLVLTDNGKLFGWGTGGN 397
Score = 91 (37.1 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 34/120 (28%), Positives = 53/120 (44%)
Query: 527 EPNFCQVSCGHSLT-VALTTTGHVYTMGSPVYGQLG-DPKANG-KLPTRVEGKLTKNFVE 583
E F + CG + T V L + VY +G YG G K N K +++ +L++ +
Sbjct: 261 ENKFENIYCGGNNTYVQLENSLDVYGIGRNAYGSCGVSSKDNIIKKFEKIQ-ELSQKKIN 319
Query: 584 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQ--VKSIVCGT 641
++ G L + ++Y WG LG DD P ++ K VK+I CGT
Sbjct: 320 QLCGGQSFTVCLLNNNDLYIWGN--REILGMEYDDDAYSPLELDFFKKNNYTVKNITCGT 377
Score = 89 (36.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 32/107 (29%), Positives = 50/107 (46%)
Query: 347 HPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCN-FGLLGHGNEMS-----LW 400
+P I L N +++ V CG HT T +Y++G CN G+LG S
Sbjct: 30 NPTAIPNLPN-DIDEVICGSMHTIIKTTDDKLYSFG---CNDMGVLGRKTYSSGIKDLEH 85
Query: 401 LPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLF-TFGDGTF-GVLG 445
P +N + ++CG HTA++ G+++ T G + GVLG
Sbjct: 86 SPTLINFTFPS-KIKKITCGDNHTAILLENGKVYITGGFRDYCGVLG 131
Score = 85 (35.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 34/122 (27%), Positives = 53/122 (43%)
Query: 579 KNFVEEIACGDYHVAV-LTSRTEVYTWGKGANGRLGHGDTDD--RNFPSLVEALKDKQVK 635
+N E I CG + V L + +VY G+ A G G D+ + F + E L K++
Sbjct: 261 ENKFENIYCGGNNTYVQLENSLDVYGIGRNAYGSCGVSSKDNIIKKFEKIQE-LSQKKIN 319
Query: 636 SIVCGTSFTAAIC----LHKW----VSGV--DQSMCSGCRIPFNFKRKRHNCYN--CGLV 683
+ G SFT + L+ W + G+ D S + F FK+ + N CG
Sbjct: 320 QLCGGQSFTVCLLNNNDLYIWGNREILGMEYDDDAYSPLELDF-FKKNNYTVKNITCGTD 378
Query: 684 YC 685
+C
Sbjct: 379 HC 380
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 135 (52.6 bits), Expect = 4.1e-07, Sum P(4) = 4.1e-07
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 584 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 643
+++CG +H VL +VYT+G G +G+LGHGD + R P+LV+AL + C ++
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAC-SNH 964
Query: 644 TAAICL 649
TA + +
Sbjct: 965 TAVLLM 970
Score = 126 (49.4 bits), Expect = 3.3e-06, Sum P(4) = 3.3e-06
Identities = 33/83 (39%), Positives = 44/83 (53%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDY 590
QVSCG +V L G VYT G +GQLG N + PT V+ L + AC +
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA-LPGPSTQVTACSN- 963
Query: 591 HVAVLTSRTEVYTWGKGANGRLG 613
H AVL +V+T+G + G+LG
Sbjct: 964 HTAVLLMDGQVFTFGSFSKGQLG 986
Score = 117 (46.2 bits), Expect = 9.6e-05, Sum P(4) = 9.6e-05
Identities = 28/64 (43%), Positives = 35/64 (54%)
Query: 417 VSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHT 476
VSCG H+ V+ G ++TFG G G LGHGD S P V +L G T AC HT
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTACSN-HT 965
Query: 477 AAVV 480
A ++
Sbjct: 966 AVLL 969
Score = 103 (41.3 bits), Expect = 4.1e-07, Sum P(4) = 4.1e-07
Identities = 46/179 (25%), Positives = 72/179 (40%)
Query: 278 GGIHRSGSYAGVKMDSFVPKA---VESAVVLD--VQNIACG--GRHAALVTKQGEVFSWG 330
G I+ +G Y + + P A VE + + + + G G HA LV + G VF G
Sbjct: 510 GKIYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSVFFTG 569
Query: 331 EELGGRLGHGV----DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
G G S PK I ++ V AC + ++ G++Y +G
Sbjct: 570 SASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI 629
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
+ + SL L+G V+ V+ G HT V+ G+++TFG G G
Sbjct: 630 ------YSDSSSLV------SDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 97 (39.2 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 311 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 370
AC +++++K GE++ +G++ + SD S L+ LK V VA G+ HTC
Sbjct: 606 ACNNGSSSVISKDGELYMFGKD-------AIYSDSS--SLVSDLKGHFVTQVAMGKAHTC 656
Query: 371 AVTLSGDMYTWGGSN---C-------NFGLLGHGNE-MSLWLPKKLNGPLEGIHVSSVSC 419
+ +G+++T+G +N C N G G G E M+ + + L L+ S+ C
Sbjct: 657 VLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMC 716
Query: 420 GP 421
P
Sbjct: 717 PP 718
Score = 70 (29.7 bits), Expect = 0.00039, Sum P(5) = 0.00039
Identities = 43/182 (23%), Positives = 73/182 (40%)
Query: 306 DVQNIACG-GRHAALV-TKQGEVFSWG--EELGGRLGH-GVDSDVSHPKLIDALKNINVE 360
D ++ G GR AL+ T G+++ G + LG + G V P + + K ++
Sbjct: 490 DEESAILGAGREFALMKTANGKIYYTGKYQSLGIKQGGPSAGKWVELP-ITKSPKIVHFS 548
Query: 361 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSC 419
+ G H +T S G S + PKK+ +EG V +C
Sbjct: 549 VGHDGSHALLVAEDGSVFFTGSASKGEDGESTKSRRQSKPYKPKKII-KMEGKIVVYTAC 607
Query: 420 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
++V++ G+L+ FG + D S+ V LKG + A G HT +
Sbjct: 608 NNGSSSVISKDGELYMFGKDAI----YSDSSSL-----VSDLKGHFVTQVAMGKAHTCVL 658
Query: 480 VE 481
++
Sbjct: 659 MK 660
Score = 48 (22.0 bits), Expect = 0.00039, Sum P(5) = 0.00039
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
QV+ G + T L G V+T G GQ G
Sbjct: 647 QVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 44 (20.5 bits), Expect = 4.1e-07, Sum P(4) = 4.1e-07
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 899 EALAVAGEETAKCRAAKDVIKSLTAQLKDM 928
+ L+ A EE C A V+ ++ KD+
Sbjct: 1853 QLLSKANEEDKNCSRALSVVSTVVRAAKDL 1882
Score = 43 (20.2 bits), Expect = 4.1e-07, Sum P(4) = 4.1e-07
Identities = 17/71 (23%), Positives = 30/71 (42%)
Query: 744 VEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNN-- 801
V+ E+ +H TS+E +K + + E + +PL V L+N
Sbjct: 1737 VDDSEHAGDSTHSHRWTSLELVKGTYTTDDSPSDIAEIRLDKVVPLKENVKYAVRLSNYG 1796
Query: 802 SKSSNPVFGST 812
S+++N G T
Sbjct: 1797 SRTANGDGGMT 1807
Score = 37 (18.1 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 896 QLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVR 938
QL++ LA G A KD+ + +L++ E+L A++
Sbjct: 2116 QLEKELANLGGVCAAALMKKDLALPVGNELEEDLEILEEAALQ 2158
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 138 (53.6 bits), Expect = 6.3e-07, Sum P(4) = 6.3e-07
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 584 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 643
+++CG +H VL +VYT+G G +G+LGHGD + R P+LV+AL + + G++
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNH 964
Query: 644 TAAICL 649
TA + +
Sbjct: 965 TAVLVM 970
Score = 125 (49.1 bits), Expect = 7.6e-05, Sum P(5) = 7.6e-05
Identities = 31/83 (37%), Positives = 43/83 (51%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDY 590
QVSCG +V L G VYT G +GQLG N + PT V+ + ++ G
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS--TQVTAGSN 963
Query: 591 HVAVLTSRTEVYTWGKGANGRLG 613
H AVL +V+T+G + G+LG
Sbjct: 964 HTAVLVMDGQVFTFGSFSKGQLG 986
Score = 103 (41.3 bits), Expect = 6.3e-07, Sum P(4) = 6.3e-07
Identities = 46/179 (25%), Positives = 72/179 (40%)
Query: 278 GGIHRSGSYAGVKMDSFVPKA---VESAVVLD--VQNIACG--GRHAALVTKQGEVFSWG 330
G I+ +G Y + + P A VE + + + + G G HA LV + G VF G
Sbjct: 510 GKIYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSVFFTG 569
Query: 331 EELGGRLGHGV----DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
G G S PK I ++ V AC + ++ G++Y +G
Sbjct: 570 SASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTACNNGSSSVISKDGELYMFGKDAI 629
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
+ + SL L+G V+ V+ G HT V+ G+++TFG G G
Sbjct: 630 ------YSDSSSLV------SDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 97 (39.2 bits), Expect = 1.5e-05, Sum P(5) = 1.5e-05
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 311 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 370
AC +++++K GE++ +G++ + SD S L+ LK V VA G+ HTC
Sbjct: 606 ACNNGSSSVISKDGELYMFGKD-------AIYSDSS--SLVSDLKGHFVTQVAMGKAHTC 656
Query: 371 AVTLSGDMYTWGGSN---C-------NFGLLGHGNE-MSLWLPKKLNGPLEGIHVSSVSC 419
+ +G+++T+G +N C N G G G E M+ + + L L+ S+ C
Sbjct: 657 VLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMC 716
Query: 420 GP 421
P
Sbjct: 717 PP 718
Score = 42 (19.8 bits), Expect = 6.3e-07, Sum P(4) = 6.3e-07
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 744 VEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNN-- 801
V+ E+ +H TS+E +K + + E + +PL V L N
Sbjct: 1737 VDDSEHSGDSTHSHRWTSLELVKGTYTTDDSPSDIAEIRLDKVVPLKENVKYAVRLRNYG 1796
Query: 802 SKSSNPVFGST 812
S+++N G T
Sbjct: 1797 SRTANGDGGMT 1807
Score = 41 (19.5 bits), Expect = 4.1e-06, Sum P(5) = 4.1e-06
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 899 EALAVAGEETAKCRAAKDVIKSLTAQLKDM 928
+ ++ A EE C A V+ ++ KD+
Sbjct: 1853 QLVSKANEEDKNCSRALSVVSTVVRAAKDL 1882
Score = 40 (19.1 bits), Expect = 6.3e-07, Sum P(4) = 6.3e-07
Identities = 16/63 (25%), Positives = 25/63 (39%)
Query: 877 EELTRKSQLQEIELERTTRQLKEALA---VAGEETAKCRAAKDVIKSLTAQLKDMAEMLP 933
E+ KS + E E+ TR + L+ +AGE L + D+ LP
Sbjct: 3649 EDEDNKSSKENAEQEKDTRVCEHPLSDIVIAGEAA---HPLPHTFHRLLQTISDLMMSLP 3705
Query: 934 VGA 936
G+
Sbjct: 3706 SGS 3708
Score = 38 (18.4 bits), Expect = 7.8e-06, Sum P(5) = 7.8e-06
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 896 QLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVR 938
QL++ LA G A KD+ + +L++ E+L A++
Sbjct: 2116 QLEKELANLGGVCAAALMKKDLALPIGNELEEDLEILEEAALQ 2158
Score = 37 (18.1 bits), Expect = 4.1e-06, Sum P(5) = 4.1e-06
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 989 NRSPSQTEASHCEATTKNKNRTMKAEP 1015
N SP + S + KNK +M EP
Sbjct: 3138 NISPHGPDISKMGSINKNKVLSMLKEP 3164
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 140 (54.3 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 55/195 (28%), Positives = 86/195 (44%)
Query: 272 GDGILGGGIHRSGSYAGVKMDSFVPKAV---ESAVVLDVQNIACGGRHAALVTKQGEVFS 328
GD +L G + + G + + P+ V E + +Q +A GG H+A++T +GEV+
Sbjct: 151 GDRVLSCGEGEALGHPG-RTTTKKPRKVDIFEEEGLKPLQAVA-GGVHSAVLTSEGEVYM 208
Query: 329 WG-EELGGRLGHGVDSDVSHPKLI------DALKNINVELVACGEHHTCAVTLSGDMYTW 381
G E G GV+ + S + D K + ++A G T A+T G + W
Sbjct: 209 CGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVIAW 268
Query: 382 GG-SNCNFGLLGHGN-EMSLWLPKKLNGPLEGIH-----VSSVSCGPWHTAVVTSAGQLF 434
G N N GN ++ L K P+ +H + ++ G H ++ G L
Sbjct: 269 GNLRNSN------GNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLL 322
Query: 435 TFGDGTFGVLGHGDR 449
TFGDG G LG R
Sbjct: 323 TFGDGEMGQLGRSSR 337
Score = 58 (25.5 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 588 GDYHVAVLTSRTEVYTWGKGANGRLGHGD---TDDRNFPSLVEALKDKQVKSIVCGTSFT 644
G HV +L S +V+ GK + LG G+ DD+ L + +++ + S + G S
Sbjct: 442 GVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQH-WLYDTIQEIEFDSKIVGVSAK 500
Query: 645 AAICLHKW 652
A + W
Sbjct: 501 LATSI-AW 507
Score = 47 (21.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 30/118 (25%), Positives = 47/118 (39%)
Query: 513 KEARL-VPTCVAAL-VEPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLP 570
+E R+ +P A E F + G V L + G V+ MG LG GK
Sbjct: 418 RELRVFLPAEAPAFGAERTFVNIE-GVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKDD 476
Query: 571 TR--VEGKLTK-NFVEEIACGDYHVAVLTSRTE---VYTWGKGANGRLGHG--DTDDR 620
+ + + + F +I +A + +E Y WG G+LG G D D++
Sbjct: 477 QQHWLYDTIQEIEFDSKIVGVSAKLATSIAWSEDGTAYAWGFDTTGQLGLGLKDEDEK 534
>ASPGD|ASPL0000042168 [details] [associations]
symbol:AN2073 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 EMBL:BN001307
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:AACD01000032 PRINTS:PR00633 PROSITE:PS50012
eggNOG:COG5184 OrthoDB:EOG42VCR5 RefSeq:XP_659677.1
ProteinModelPortal:Q5BBK7 EnsemblFungi:CADANIAT00008743
GeneID:2875213 KEGG:ani:AN2073.2 HOGENOM:HOG000182979 OMA:DRLSQIC
Uniprot:Q5BBK7
Length = 1680
Score = 169 (64.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 59/183 (32%), Positives = 95/183 (51%)
Query: 292 DSFVPKAVESAVVLDVQNIACGGRHAALVTKQGE--VFSWGEELGGRLGHGVDSDVSHPK 349
D +P ++ A L +Q +A H A++T E +F G GGRLG G +S
Sbjct: 411 DQDLPAFIK-ARPLKIQTLAMSKLHTAILTDDPESNLFICGFGPGGRLGTGDESTRFSFV 469
Query: 350 LIDA--LKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG-------NEMSLW 400
I+ L N V VA G+ HT A+T GD+++WG SN FG LG+G +++ +
Sbjct: 470 CIEGGGLANKKVASVALGQDHTLAITEHGDIFSWG-SN-KFGQLGYGLPRANNKDDVPVQ 527
Query: 401 L-PKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG--DGTFGVLGHGDR-ISV-STP 455
L P+++ P + + + H+ V +++G L+TFG +G G++ R + V +TP
Sbjct: 528 LSPRQIFNPFKKEVILGAAASAVHSVVYSTSG-LYTFGKNEGQLGLVDSDARSLEVQTTP 586
Query: 456 REV 458
R V
Sbjct: 587 RRV 589
Score = 39 (18.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 611 RLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTA 645
R + DTDDR F V + I+ +F A
Sbjct: 1071 RYMYADTDDRLFDD-VRTKNTQDFVDIITDVAFVA 1104
>RGD|1305099 [details] [associations]
symbol:Rufy1 "RUN and FYVE domain containing 1" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0008565 "protein transporter activity" evidence=ISO]
[GO:0015031 "protein transport" evidence=ISO] [GO:0030100
"regulation of endocytosis" evidence=ISO] [GO:0005770 "late
endosome" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 RGD:1305099
GO:GO:0005737 GO:GO:0046872 GO:GO:0008565 GO:GO:0030100
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 eggNOG:NOG270133
HOVERGEN:HBG057053 HOGENOM:HOG000030913 OrthoDB:EOG41NTKP
IPI:IPI00372367 UniGene:Rn.39348 EMBL:BC099227 UCSC:RGD:1305099
InParanoid:Q4FZR3 ArrayExpress:Q4FZR3 Genevestigator:Q4FZR3
Uniprot:Q4FZR3
Length = 394
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 650 HKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVC 709
H W+ + + C C F+ R++H+C NCG ++C+TCSS + P+ KP RVC
Sbjct: 323 HTWLKDDEATHCKQCEKDFSISRRKHHCRNCGHIFCNTCSSNELA----LPSYPKPVRVC 378
Query: 710 DNC 712
D+C
Sbjct: 379 DSC 381
>UNIPROTKB|E2RP97 [details] [associations]
symbol:FGD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
Pfam:PF00169 InterPro:IPR000219 InterPro:IPR000306
InterPro:IPR001849 Pfam:PF00621 Pfam:PF01363 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00064 SMART:SM00233 SMART:SM00325
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0035023
GeneTree:ENSGT00680000099588 EMBL:AAEX03008295
Ensembl:ENSCAFT00000002252 NextBio:20856509 Uniprot:E2RP97
Length = 657
Score = 147 (56.8 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 36/123 (29%), Positives = 60/123 (48%)
Query: 597 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK-DKQVKSIVCGTSFTAAICLHKWVSG 655
S+ E+ +W + + + + F + V+ + D Q + + S + +WV
Sbjct: 404 SQEEMISWMQACQAAIDQIEKRNETFKAAVQGPEGDTQEQEL---QSEELGLRAPQWVRD 460
Query: 656 VDQSMCSGCRIPFN-FKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFG 714
+MC CR PFN +R+RH+C CG V C CS +A + + N+P RVC +C+
Sbjct: 461 KMVTMCMRCREPFNALRRRRHHCRACGFVVCAKCSD---YRAELKYDDNRPNRVCFHCYT 517
Query: 715 KLT 717
LT
Sbjct: 518 FLT 520
>UNIPROTKB|J9P6H5 [details] [associations]
symbol:FGD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
Pfam:PF00169 InterPro:IPR000219 InterPro:IPR000306
InterPro:IPR001849 Pfam:PF00621 Pfam:PF01363 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00064 SMART:SM00233 SMART:SM00325
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0035023
GeneTree:ENSGT00680000099588 CTD:221472 KO:K05721 OMA:YAAPQDM
EMBL:AAEX03008295 RefSeq:XP_538892.2 ProteinModelPortal:J9P6H5
Ensembl:ENSCAFT00000047894 GeneID:481771 KEGG:cfa:481771
Uniprot:J9P6H5
Length = 657
Score = 147 (56.8 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 36/123 (29%), Positives = 60/123 (48%)
Query: 597 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK-DKQVKSIVCGTSFTAAICLHKWVSG 655
S+ E+ +W + + + + F + V+ + D Q + + S + +WV
Sbjct: 404 SQEEMISWMQACQAAIDQIEKRNETFKAAVQGPEGDTQEQEL---QSEELGLRAPQWVRD 460
Query: 656 VDQSMCSGCRIPFN-FKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFG 714
+MC CR PFN +R+RH+C CG V C CS +A + + N+P RVC +C+
Sbjct: 461 KMVTMCMRCREPFNALRRRRHHCRACGFVVCAKCSD---YRAELKYDDNRPNRVCFHCYT 517
Query: 715 KLT 717
LT
Sbjct: 518 FLT 520
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 113 (44.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 30/98 (30%), Positives = 49/98 (50%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELV--A 363
DV GG H ++K G+V+S+G G LG D+ V +++ + ++V +
Sbjct: 76 DVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR--DTSVEGSEMVPGKVELQEKVVQVS 133
Query: 364 CGEHHTCAVTLSGDMYTWGG-SNCNFGL---LGHGNEM 397
G+ HT A+T G ++ WG +C F LG G E+
Sbjct: 134 AGDSHTAALTDDGRVFLWGSFRHCLFHTSQRLGWGKEV 171
Score = 108 (43.1 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 41/126 (32%), Positives = 65/126 (51%)
Query: 316 HAALVTKQGEVFSWGEELGGRLGHGVD-SDVSHPKLIDALKNINVELVACGEHHTCAVTL 374
H + T+ G V + G+ G+LG G + + P L+ +++ V+ A G H C ++
Sbjct: 35 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV-VQAEAGGMHTVC-LSK 92
Query: 375 SGDMYTWGGSNCNF-GLLGHGN--EMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAG 431
SG +Y++G CN G LG E S +P K+ L+ V VS G HTA +T G
Sbjct: 93 SGQVYSFG---CNDEGALGRDTSVEGSEMVPGKVE--LQE-KVVQVSAGDSHTAALTDDG 146
Query: 432 QLFTFG 437
++F +G
Sbjct: 147 RVFLWG 152
Score = 72 (30.4 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 556 VYGQLGDPKANGKLPTRVEGKLTKNFVEEIACGDYHVAVLTSRTEVYTWGKGANGRLG 613
V G L +P +P +V+ + V ++A G+ H+ +LT+ ++YT G G G+LG
Sbjct: 188 VIGLL-EPMKKSMVPVQVQLDVP---VVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 241
Score = 60 (26.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
+V+ G+ V LT G +YT+G GQLG
Sbjct: 212 KVASGNDHLVMLTADGDLYTLGCGEQGQLG 241
Score = 57 (25.1 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
+ V V+ G H ++T+ G L+T G G G LG
Sbjct: 208 VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 241
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 139 (54.0 bits), Expect = 2.7e-06, Sum P(6) = 2.7e-06
Identities = 31/95 (32%), Positives = 54/95 (56%)
Query: 558 GQLGDPKANGKLPTRVEGKLTKNF---VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 614
G+ G+ A+ K+ T G + + +++CG +H VL +VYT+G G +G+LGH
Sbjct: 878 GERGEKDAS-KITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGH 936
Query: 615 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 649
GD + R P+LV+AL + + G++ TA + +
Sbjct: 937 GDVNSRGCPTLVQALPGPSTQ-VTAGSNHTAVLLM 970
Score = 124 (48.7 bits), Expect = 7.4e-05, Sum P(6) = 7.4e-05
Identities = 31/83 (37%), Positives = 43/83 (51%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDY 590
QVSCG +V L G VYT G +GQLG N + PT V+ + ++ G
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS--TQVTAGSN 963
Query: 591 HVAVLTSRTEVYTWGKGANGRLG 613
H AVL +V+T+G + G+LG
Sbjct: 964 HTAVLLMDGQVFTFGSFSKGQLG 986
Score = 101 (40.6 bits), Expect = 2.7e-06, Sum P(6) = 2.7e-06
Identities = 45/179 (25%), Positives = 72/179 (40%)
Query: 278 GGIHRSGSYAGVKMDSFVPKA---VESAVVLD--VQNIACG--GRHAALVTKQGEVFSWG 330
G I+ +G Y + + P A VE + + + + G G HA LV + G +F G
Sbjct: 510 GKIYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTG 569
Query: 331 EELGGRLGHGV----DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
G G S PK I ++ V AC + ++ G++Y +G
Sbjct: 570 SASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI 629
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
+ + SL L+G V+ V+ G HT V+ G+++TFG G G
Sbjct: 630 ------YSDSSSLVTD------LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 96 (38.9 bits), Expect = 7.9e-06, Sum P(6) = 7.9e-06
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 311 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 370
AC +++++K GE++ +G++ + SD S L+ LK V VA G+ HTC
Sbjct: 606 ACNNGSSSVISKDGELYMFGKD-------AIYSDSS--SLVTDLKGHFVTQVAMGKAHTC 656
Query: 371 AVTLSGDMYTWGGSN---C-------NFGLLGHGNE-MSLWLPKKLNGPLEGIHVSSVSC 419
+ +G+++T+G +N C N G G G E M+ + + L L+ S+ C
Sbjct: 657 VLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMC 716
Query: 420 GP 421
P
Sbjct: 717 PP 718
Score = 71 (30.1 bits), Expect = 0.00044, Sum P(7) = 0.00044
Identities = 43/182 (23%), Positives = 73/182 (40%)
Query: 306 DVQNIACG-GRHAALV-TKQGEVFSWG--EELGGRLGH-GVDSDVSHPKLIDALKNINVE 360
D ++ G GR AL+ T G+++ G + LG + G V P + + K ++
Sbjct: 490 DEESAVLGAGREFALMKTSSGKIYYTGKYQSLGIKQGGPSAGKWVELP-ITKSPKIVHFS 548
Query: 361 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSC 419
+ G H +T S G S + PKK+ +EG V +C
Sbjct: 549 VGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKII-KMEGKIVVYTAC 607
Query: 420 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
++V++ G+L+ FG + D S+ T LKG + A G HT +
Sbjct: 608 NNGSSSVISKDGELYMFGKDAI----YSDSSSLVT-----DLKGHFVTQVAMGKAHTCVL 658
Query: 480 VE 481
++
Sbjct: 659 MK 660
Score = 48 (22.0 bits), Expect = 0.00044, Sum P(7) = 0.00044
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
QV+ G + T L G V+T G GQ G
Sbjct: 647 QVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 44 (20.5 bits), Expect = 2.7e-06, Sum P(6) = 2.7e-06
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 899 EALAVAGEETAKCRAAKDVIKSLTAQLKDM 928
+ L+ A EE C A V+ ++ KD+
Sbjct: 1856 QLLSKANEEDKNCSRALSVVSTVVRAAKDL 1885
Score = 42 (19.8 bits), Expect = 2.7e-06, Sum P(6) = 2.7e-06
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 744 VEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNN-- 801
V+ E+ +H TS+E +K + + E + +PL V L N
Sbjct: 1740 VDDSEHAGDSTHSHRWTSLELVKGTYTTDDSPSDIAEIRLDKVVPLKENVKYAVRLRNYG 1799
Query: 802 SKSSNPVFGST 812
S+++N G T
Sbjct: 1800 SRTANGDGGMT 1810
Score = 41 (19.5 bits), Expect = 2.7e-06, Sum P(6) = 2.7e-06
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 1000 CEATTKNKNRTMKAEPAQGDEWVEQDETG--VYITLVALPGGLKDLKRVRFSRKKFSEKQ 1057
C ++T N + + E+ DE+ V+ ++ P LKD + +R S K S K
Sbjct: 2898 CTSSTLKTNSLTDSTCDESSEFKSVDESSNKVHFSIGKAP--LKDEQEMRAS-PKISRKC 2954
Query: 1058 AEQ 1060
A +
Sbjct: 2955 ANR 2957
Score = 40 (19.1 bits), Expect = 2.7e-06, Sum P(6) = 2.7e-06
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 117 GLKALISRSHYR---KGRA-ESRSDEVSSVATSPR 147
GL A SR HY+ GRA R + + A S R
Sbjct: 16 GLPAADSRGHYQLLLSGRALADRYRRIYTAALSDR 50
Score = 38 (18.4 bits), Expect = 9.7e-06, Sum P(6) = 9.7e-06
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 896 QLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVR 938
QL++ LA G A KD+ + +L++ E+L A++
Sbjct: 2119 QLEKELANLGGVCAAALMKKDLALPIGNELEEDLEILEEAALQ 2161
>WB|WBGene00003084 [details] [associations]
symbol:lst-2 species:6239 "Caenorhabditis elegans"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=ISS]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 EMBL:FO081006
GO:GO:0040027 GO:GO:0032266 GeneTree:ENSGT00670000097904 PIR:T33568
RefSeq:NP_508756.2 HSSP:Q15075 ProteinModelPortal:Q9TZD0 SMR:Q9TZD0
STRING:Q9TZD0 PaxDb:Q9TZD0 EnsemblMetazoa:R160.7 GeneID:180712
KEGG:cel:CELE_R160.7 UCSC:R160.7 CTD:180712 WormBase:R160.7
eggNOG:NOG247076 HOGENOM:HOG000113402 InParanoid:Q9TZD0 OMA:LHIITEM
NextBio:910578 ArrayExpress:Q9TZD0 Uniprot:Q9TZD0
Length = 661
Score = 146 (56.5 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 651 KWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNP-NKPYRVC 709
+WV D C+ C +PFNF R+RH+C NCG ++CH CS S+ + ++ RVC
Sbjct: 562 RWVPDEDCEQCTACSMPFNFVRRRHHCRNCGRIFCHKCSCNT---ISIPEHGYDRKVRVC 618
Query: 710 DNCF 713
+ C+
Sbjct: 619 NLCY 622
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 139 (54.0 bits), Expect = 3.0e-06, Sum P(6) = 3.0e-06
Identities = 31/95 (32%), Positives = 54/95 (56%)
Query: 558 GQLGDPKANGKLPTRVEGKLTKNF---VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 614
G+ G+ A+ K+ T G + + +++CG +H VL +VYT+G G +G+LGH
Sbjct: 916 GERGEKDAS-KITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGH 974
Query: 615 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 649
GD + R P+LV+AL + + G++ TA + +
Sbjct: 975 GDVNSRGCPTLVQALPGPSTQ-VTAGSNHTAVLLM 1008
Score = 124 (48.7 bits), Expect = 8.2e-05, Sum P(6) = 8.2e-05
Identities = 31/83 (37%), Positives = 43/83 (51%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDY 590
QVSCG +V L G VYT G +GQLG N + PT V+ + ++ G
Sbjct: 944 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS--TQVTAGSN 1001
Query: 591 HVAVLTSRTEVYTWGKGANGRLG 613
H AVL +V+T+G + G+LG
Sbjct: 1002 HTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 101 (40.6 bits), Expect = 3.0e-06, Sum P(6) = 3.0e-06
Identities = 45/179 (25%), Positives = 72/179 (40%)
Query: 278 GGIHRSGSYAGVKMDSFVPKA---VESAVVLD--VQNIACG--GRHAALVTKQGEVFSWG 330
G I+ +G Y + + P A VE + + + + G G HA LV + G +F G
Sbjct: 548 GKIYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTG 607
Query: 331 EELGGRLGHGV----DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
G G S PK I ++ V AC + ++ G++Y +G
Sbjct: 608 SASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI 667
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
+ + SL L+G V+ V+ G HT V+ G+++TFG G G
Sbjct: 668 ------YSDSSSLVTD------LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 714
Score = 96 (38.9 bits), Expect = 8.7e-06, Sum P(6) = 8.7e-06
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 311 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 370
AC +++++K GE++ +G++ + SD S L+ LK V VA G+ HTC
Sbjct: 644 ACNNGSSSVISKDGELYMFGKD-------AIYSDSS--SLVTDLKGHFVTQVAMGKAHTC 694
Query: 371 AVTLSGDMYTWGGSN---C-------NFGLLGHGNE-MSLWLPKKLNGPLEGIHVSSVSC 419
+ +G+++T+G +N C N G G G E M+ + + L L+ S+ C
Sbjct: 695 VLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMC 754
Query: 420 GP 421
P
Sbjct: 755 PP 756
Score = 71 (30.1 bits), Expect = 0.00049, Sum P(7) = 0.00049
Identities = 43/182 (23%), Positives = 73/182 (40%)
Query: 306 DVQNIACG-GRHAALV-TKQGEVFSWG--EELGGRLGH-GVDSDVSHPKLIDALKNINVE 360
D ++ G GR AL+ T G+++ G + LG + G V P + + K ++
Sbjct: 528 DEESAVLGAGREFALMKTSSGKIYYTGKYQSLGIKQGGPSAGKWVELP-ITKSPKIVHFS 586
Query: 361 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSC 419
+ G H +T S G S + PKK+ +EG V +C
Sbjct: 587 VGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKII-KMEGKIVVYTAC 645
Query: 420 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
++V++ G+L+ FG + D S+ T LKG + A G HT +
Sbjct: 646 NNGSSSVISKDGELYMFGKDAI----YSDSSSLVT-----DLKGHFVTQVAMGKAHTCVL 696
Query: 480 VE 481
++
Sbjct: 697 MK 698
Score = 48 (22.0 bits), Expect = 0.00049, Sum P(7) = 0.00049
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
QV+ G + T L G V+T G GQ G
Sbjct: 685 QVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 714
Score = 44 (20.5 bits), Expect = 3.0e-06, Sum P(6) = 3.0e-06
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 899 EALAVAGEETAKCRAAKDVIKSLTAQLKDM 928
+ L+ A EE C A V+ ++ KD+
Sbjct: 1894 QLLSKANEEDKNCSRALSVVSTVVRAAKDL 1923
Score = 42 (19.8 bits), Expect = 3.0e-06, Sum P(6) = 3.0e-06
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 744 VEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNN-- 801
V+ E+ +H TS+E +K + + E + +PL V L N
Sbjct: 1778 VDDSEHAGDSTHSHRWTSLELVKGTYTTDDSPSDIAEIRLDKVVPLKENVKYAVRLRNYG 1837
Query: 802 SKSSNPVFGST 812
S+++N G T
Sbjct: 1838 SRTANGDGGMT 1848
Score = 41 (19.5 bits), Expect = 3.0e-06, Sum P(6) = 3.0e-06
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 1000 CEATTKNKNRTMKAEPAQGDEWVEQDETG--VYITLVALPGGLKDLKRVRFSRKKFSEKQ 1057
C ++T N + + E+ DE+ V+ ++ P LKD + +R S K S K
Sbjct: 2988 CTSSTLKTNSLTDSTCDESSEFKSVDESSNKVHFSIGKAP--LKDEQEMRAS-PKISRKC 3044
Query: 1058 AEQ 1060
A +
Sbjct: 3045 ANR 3047
Score = 40 (19.1 bits), Expect = 3.0e-06, Sum P(6) = 3.0e-06
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 117 GLKALISRSHYR---KGRA-ESRSDEVSSVATSPR 147
GL A SR HY+ GRA R + + A S R
Sbjct: 54 GLPAADSRGHYQLLLSGRALADRYRRIYTAALSDR 88
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(6) = 1.1e-05
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 896 QLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVR 938
QL++ LA G A KD+ + +L++ E+L A++
Sbjct: 2157 QLEKELANLGGVCAAALMKKDLALPIGNELEEDLEILEEAALQ 2199
>UNIPROTKB|F1LR42 [details] [associations]
symbol:Rufy1 "Protein Rufy1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 RGD:1305099 GO:GO:0005737 GO:GO:0046872 GO:GO:0008565
GO:GO:0030100 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 InterPro:IPR004012 Pfam:PF02759 SMART:SM00593
PROSITE:PS50826 CTD:80230 KO:K12482 OMA:AITSFEG
GeneTree:ENSGT00550000074558 IPI:IPI00372367 RefSeq:NP_001094197.1
UniGene:Rn.39348 PRIDE:F1LR42 Ensembl:ENSRNOT00000004740
GeneID:360521 KEGG:rno:360521 NextBio:673085 ArrayExpress:F1LR42
Uniprot:F1LR42
Length = 711
Score = 146 (56.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 650 HKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVC 709
H W+ + + C C F+ R++H+C NCG ++C+TCSS + P+ KP RVC
Sbjct: 640 HTWLKDDEATHCKQCEKDFSISRRKHHCRNCGHIFCNTCSSNELA----LPSYPKPVRVC 695
Query: 710 DNC 712
D+C
Sbjct: 696 DSC 698
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 139 (54.0 bits), Expect = 3.0e-06, Sum P(5) = 3.0e-06
Identities = 31/95 (32%), Positives = 54/95 (56%)
Query: 558 GQLGDPKANGKLPTRVEGKLTKNF---VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 614
G+ G+ A+ K+ T G + + +++CG +H VL +VYT+G G +G+LGH
Sbjct: 878 GERGEKDAS-KITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGH 936
Query: 615 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 649
GD + R P+LV+AL + + G++ TA + +
Sbjct: 937 GDVNSRGCPTLVQALPGPSTQ-VTAGSNHTAVLLM 970
Score = 124 (48.7 bits), Expect = 8.9e-05, Sum P(5) = 8.9e-05
Identities = 31/83 (37%), Positives = 43/83 (51%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDY 590
QVSCG +V L G VYT G +GQLG N + PT V+ + ++ G
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS--TQVTAGSN 963
Query: 591 HVAVLTSRTEVYTWGKGANGRLG 613
H AVL +V+T+G + G+LG
Sbjct: 964 HTAVLLMDGQVFTFGSFSKGQLG 986
Score = 101 (40.6 bits), Expect = 3.0e-06, Sum P(5) = 3.0e-06
Identities = 45/179 (25%), Positives = 72/179 (40%)
Query: 278 GGIHRSGSYAGVKMDSFVPKA---VESAVVLD--VQNIACG--GRHAALVTKQGEVFSWG 330
G I+ +G Y + + P A VE + + + + G G HA LV + G +F G
Sbjct: 510 GKIYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTG 569
Query: 331 EELGGRLGHGV----DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
G G S PK I ++ V AC + ++ G++Y +G
Sbjct: 570 SASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI 629
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
+ + SL L+G V+ V+ G HT V+ G+++TFG G G
Sbjct: 630 ------YSDSSSLVTD------LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 96 (38.9 bits), Expect = 9.0e-06, Sum P(5) = 9.0e-06
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 311 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 370
AC +++++K GE++ +G++ + SD S L+ LK V VA G+ HTC
Sbjct: 606 ACNNGSSSVISKDGELYMFGKD-------AIYSDSS--SLVTDLKGHFVTQVAMGKAHTC 656
Query: 371 AVTLSGDMYTWGGSN---C-------NFGLLGHGNE-MSLWLPKKLNGPLEGIHVSSVSC 419
+ +G+++T+G +N C N G G G E M+ + + L L+ S+ C
Sbjct: 657 VLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMC 716
Query: 420 GP 421
P
Sbjct: 717 PP 718
Score = 43 (20.2 bits), Expect = 3.0e-06, Sum P(5) = 3.0e-06
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 899 EALAVAGEETAKCRAAKDVIKSLTAQLKDM 928
+ L+ A EE C A V+ ++ KD+
Sbjct: 1856 QLLSKANEEDKNCSRALSVVSTVVRASKDL 1885
Score = 42 (19.8 bits), Expect = 3.0e-06, Sum P(5) = 3.0e-06
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 744 VEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNN-- 801
V+ E+ +H TS+E +K + + E + +PL V L N
Sbjct: 1740 VDDSEHAGDSTHSHRWTSLELVKGTYTTDDSPSDIAEIRLDKVVPLKENVKYAVRLRNYG 1799
Query: 802 SKSSNPVFGST 812
S+++N G T
Sbjct: 1800 SRTANGDGGMT 1810
Score = 38 (18.4 bits), Expect = 9.0e-06, Sum P(5) = 9.0e-06
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 896 QLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVR 938
QL++ LA G A KD+ + +L++ E+L A++
Sbjct: 2119 QLEKELANLGGVCAAALMKKDLALPIGNELEEDLEILEEAALQ 2161
Score = 37 (18.1 bits), Expect = 3.0e-06, Sum P(5) = 3.0e-06
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 117 GLKALISRSHYR---KGRA-ESRSDEVSSVATSPR 147
GL A SR HY+ GRA R + + A + R
Sbjct: 16 GLPAADSRGHYQLLLSGRALADRYRRIYTAALNDR 50
Score = 37 (18.1 bits), Expect = 4.4e-06, Sum P(4) = 4.4e-06
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 779 QEFNR-----TRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSA 818
Q FN+ +G G S+G+ N S SS P S K S+
Sbjct: 2654 QAFNKGASCSAQGFDYGLGNSKGDRGNISTSSKPASTSGKSELSS 2698
>MGI|MGI:2429762 [details] [associations]
symbol:Rufy1 "RUN and FYVE domain containing 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005768
"endosome" evidence=IEA] [GO:0005770 "late endosome" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IDA] [GO:0015031 "protein transport"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 MGI:MGI:2429762 GO:GO:0005737 GO:GO:0031901
GO:GO:0046872 GO:GO:0008565 GO:GO:0006897 GO:GO:0030100
GO:GO:0008289 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 EMBL:AL645904 InterPro:IPR004012 Pfam:PF02759
SMART:SM00593 PROSITE:PS50826 CTD:80230 eggNOG:NOG270133
HOVERGEN:HBG057053 KO:K12482 OMA:AITSFEG EMBL:AK046625
EMBL:AK046633 EMBL:AK051178 EMBL:AJ250024 IPI:IPI00222147
RefSeq:NP_766145.1 UniGene:Mm.390400 ProteinModelPortal:Q8BIJ7
SMR:Q8BIJ7 IntAct:Q8BIJ7 STRING:Q8BIJ7 PhosphoSite:Q8BIJ7
PaxDb:Q8BIJ7 PRIDE:Q8BIJ7 DNASU:216724 Ensembl:ENSMUST00000020643
GeneID:216724 KEGG:mmu:216724 UCSC:uc007isn.1
GeneTree:ENSGT00550000074558 HOGENOM:HOG000030913 InParanoid:Q8BIJ7
OrthoDB:EOG41NTKP NextBio:375264 Bgee:Q8BIJ7 CleanEx:MM_RUFY1
Genevestigator:Q8BIJ7 GermOnline:ENSMUSG00000020375 Uniprot:Q8BIJ7
Length = 712
Score = 146 (56.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 650 HKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVC 709
H W+ + + C C F+ R++H+C NCG ++C+TCSS + P+ KP RVC
Sbjct: 641 HTWLKDDEATHCKQCEKDFSISRRKHHCRNCGHIFCNTCSSNELA----LPSYPKPVRVC 696
Query: 710 DNC 712
D+C
Sbjct: 697 DSC 699
>UNIPROTKB|F1S429 [details] [associations]
symbol:RUFY1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030100 "regulation of endocytosis" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000306
Pfam:PF01363 PROSITE:PS50089 SMART:SM00064 GO:GO:0005737
GO:GO:0046872 GO:GO:0008565 GO:GO:0008270 GO:GO:0030100
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
OMA:AITSFEG GeneTree:ENSGT00550000074558 EMBL:CU914196
EMBL:CU915704 Ensembl:ENSSSCT00000015318 Uniprot:F1S429
Length = 718
Score = 146 (56.5 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 650 HKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVC 709
H W+ + + C C F+ R++H+C NCG ++C+TCSS + P+ KP RVC
Sbjct: 646 HTWLKDDEATHCKQCEKEFSISRRKHHCRNCGHIFCNTCSSNELA----LPSYPKPVRVC 701
Query: 710 DNC 712
D+C
Sbjct: 702 DSC 704
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 139 (54.0 bits), Expect = 3.1e-06, Sum P(5) = 3.1e-06
Identities = 31/95 (32%), Positives = 54/95 (56%)
Query: 558 GQLGDPKANGKLPTRVEGKLTKNF---VEEIACGDYHVAVLTSRTEVYTWGKGANGRLGH 614
G+ G+ A+ K+ T G + + +++CG +H VL +VYT+G G +G+LGH
Sbjct: 916 GERGEKDAS-KITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGH 974
Query: 615 GDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICL 649
GD + R P+LV+AL + + G++ TA + +
Sbjct: 975 GDVNSRGCPTLVQALPGPSTQ-VTAGSNHTAVLLM 1008
Score = 124 (48.7 bits), Expect = 9.2e-05, Sum P(5) = 9.2e-05
Identities = 31/83 (37%), Positives = 43/83 (51%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDY 590
QVSCG +V L G VYT G +GQLG N + PT V+ + ++ G
Sbjct: 944 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS--TQVTAGSN 1001
Query: 591 HVAVLTSRTEVYTWGKGANGRLG 613
H AVL +V+T+G + G+LG
Sbjct: 1002 HTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 101 (40.6 bits), Expect = 3.1e-06, Sum P(5) = 3.1e-06
Identities = 45/179 (25%), Positives = 72/179 (40%)
Query: 278 GGIHRSGSYAGVKMDSFVPKA---VESAVVLD--VQNIACG--GRHAALVTKQGEVFSWG 330
G I+ +G Y + + P A VE + + + + G G HA LV + G +F G
Sbjct: 548 GKIYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTG 607
Query: 331 EELGGRLGHGV----DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNC 386
G G S PK I ++ V AC + ++ G++Y +G
Sbjct: 608 SASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI 667
Query: 387 NFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
+ + SL L+G V+ V+ G HT V+ G+++TFG G G
Sbjct: 668 ------YSDSSSLVTD------LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 714
Score = 96 (38.9 bits), Expect = 9.3e-06, Sum P(5) = 9.3e-06
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 311 ACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTC 370
AC +++++K GE++ +G++ + SD S L+ LK V VA G+ HTC
Sbjct: 644 ACNNGSSSVISKDGELYMFGKD-------AIYSDSS--SLVTDLKGHFVTQVAMGKAHTC 694
Query: 371 AVTLSGDMYTWGGSN---C-------NFGLLGHGNE-MSLWLPKKLNGPLEGIHVSSVSC 419
+ +G+++T+G +N C N G G G E M+ + + L L+ S+ C
Sbjct: 695 VLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGVENMATAMDEDLEEELDEKDEKSMMC 754
Query: 420 GP 421
P
Sbjct: 755 PP 756
Score = 43 (20.2 bits), Expect = 3.1e-06, Sum P(5) = 3.1e-06
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 899 EALAVAGEETAKCRAAKDVIKSLTAQLKDM 928
+ L+ A EE C A V+ ++ KD+
Sbjct: 1894 QLLSKANEEDKNCSRALSVVSTVVRASKDL 1923
Score = 42 (19.8 bits), Expect = 3.1e-06, Sum P(5) = 3.1e-06
Identities = 17/71 (23%), Positives = 29/71 (40%)
Query: 744 VEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNN-- 801
V+ E+ +H TS+E +K + + E + +PL V L N
Sbjct: 1778 VDDSEHAGDSTHSHRWTSLELVKGTYTTDDSPSDIAEIRLDKVVPLKENVKYAVRLRNYG 1837
Query: 802 SKSSNPVFGST 812
S+++N G T
Sbjct: 1838 SRTANGDGGMT 1848
Score = 38 (18.4 bits), Expect = 9.3e-06, Sum P(5) = 9.3e-06
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 896 QLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLPVGAVR 938
QL++ LA G A KD+ + +L++ E+L A++
Sbjct: 2157 QLEKELANLGGVCAAALMKKDLALPIGNELEEDLEILEEAALQ 2199
Score = 37 (18.1 bits), Expect = 3.1e-06, Sum P(5) = 3.1e-06
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 117 GLKALISRSHYR---KGRA-ESRSDEVSSVATSPR 147
GL A SR HY+ GRA R + + A + R
Sbjct: 54 GLPAADSRGHYQLLLSGRALADRYRRIYTAALNDR 88
Score = 37 (18.1 bits), Expect = 4.5e-06, Sum P(4) = 4.5e-06
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 779 QEFNR-----TRGLPLPNGVSQGNALNNSKSSNPVFGSTKKFFSA 818
Q FN+ +G G S+G+ N S SS P S K S+
Sbjct: 2692 QAFNKGASCSAQGFDYGLGNSKGDRGNISTSSKPASTSGKSELSS 2736
>FB|FBgn0025381 [details] [associations]
symbol:rush "rush hour" species:7227 "Drosophila
melanogaster" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0006897 "endocytosis" evidence=IGI] [GO:0005769 "early
endosome" evidence=IDA] [GO:0044448 "cell cortex part"
evidence=IDA] [GO:0035091 "phosphatidylinositol binding"
evidence=IDA] [GO:0008333 "endosome to lysosome transport"
evidence=IMP] [GO:0005770 "late endosome" evidence=IDA] [GO:0007032
"endosome organization" evidence=IMP] [GO:0016324 "apical plasma
membrane" evidence=IDA] Pfam:PF00169 InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 PROSITE:PS50003 SMART:SM00064
SMART:SM00233 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
GO:GO:0016324 EMBL:AE014298 GO:GO:0006897 GO:GO:0005770
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0008333
GO:GO:0035091 GO:GO:0007032 GO:GO:0005769
GeneTree:ENSGT00680000099588 GO:GO:0044448 HSSP:Q15075
EMBL:AL031027 eggNOG:NOG308864 OMA:INKCVSD EMBL:BT003610
EMBL:BT056254 PIR:T13601 RefSeq:NP_569923.2 UniGene:Dm.7010
SMR:O76902 DIP:DIP-21949N MINT:MINT-767382 STRING:O76902
EnsemblMetazoa:FBtr0070259 GeneID:31105 KEGG:dme:Dmel_CG14782
UCSC:CG14782-RA FlyBase:FBgn0025381 InParanoid:O76902
OrthoDB:EOG4BRV2C GenomeRNAi:31105 NextBio:771964 Uniprot:O76902
Length = 316
Score = 140 (54.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 27/66 (40%), Positives = 37/66 (56%)
Query: 652 WVSGVDQSMCSGCR-IPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCD 710
WV D S+C C+ F F ++RH+C NCG V C CS+KK + + K RVCD
Sbjct: 149 WVPDTDASVCMHCKKTQFTFIQRRHHCRNCGAVVCAGCSAKKFL---LPQQSTKALRVCD 205
Query: 711 NCFGKL 716
C+ +L
Sbjct: 206 ACYERL 211
>UNIPROTKB|Q96T51 [details] [associations]
symbol:RUFY1 "RUN and FYVE domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0030100 "regulation of endocytosis"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0031901
GO:GO:0046872 GO:GO:0008565 GO:GO:0008270 GO:GO:0006897
GO:GO:0030100 GO:GO:0008289 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 InterPro:IPR004012 Pfam:PF02759 SMART:SM00593
PROSITE:PS50826 EMBL:AF312367 EMBL:AK025904 EMBL:AK075021
EMBL:BC032571 EMBL:AF361055 EMBL:AB209507 IPI:IPI00465429
IPI:IPI00556586 IPI:IPI00744637 RefSeq:NP_001035541.1
RefSeq:NP_001035542.1 RefSeq:NP_079434.3 UniGene:Hs.306769 PDB:2YQM
PDB:2YW8 PDBsum:2YQM PDBsum:2YW8 ProteinModelPortal:Q96T51
SMR:Q96T51 IntAct:Q96T51 STRING:Q96T51 PhosphoSite:Q96T51
DMDM:110282993 PaxDb:Q96T51 PRIDE:Q96T51 DNASU:80230
Ensembl:ENST00000319449 Ensembl:ENST00000377001
Ensembl:ENST00000393438 Ensembl:ENST00000437570 GeneID:80230
KEGG:hsa:80230 UCSC:uc003mka.1 CTD:80230 GeneCards:GC05P178977
HGNC:HGNC:19760 HPA:HPA038804 MIM:610327 neXtProt:NX_Q96T51
PharmGKB:PA134944787 eggNOG:NOG270133 HOVERGEN:HBG057053
InParanoid:Q96T51 KO:K12482 OMA:AITSFEG ChiTaRS:RUFY1
EvolutionaryTrace:Q96T51 GenomeRNAi:80230 NextBio:70661 Bgee:Q96T51
CleanEx:HS_RUFY1 Genevestigator:Q96T51 GermOnline:ENSG00000176783
Uniprot:Q96T51
Length = 708
Score = 145 (56.1 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 650 HKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVC 709
H W+ + + C C F+ R++H+C NCG ++C+TCSS + P+ KP RVC
Sbjct: 637 HAWLKDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELA----LPSYPKPVRVC 692
Query: 710 DNC 712
D+C
Sbjct: 693 DSC 695
>UNIPROTKB|Q0V8S0 [details] [associations]
symbol:HGS "Hepatocyte growth factor-regulated tyrosine
kinase substrate" species:9913 "Bos taurus" [GO:0032585
"multivesicular body membrane" evidence=IEA] [GO:0031901 "early
endosome membrane" evidence=IEA] [GO:0046426 "negative regulation
of JAK-STAT cascade" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR000306 InterPro:IPR002014 Pfam:PF00790
Pfam:PF01363 PROSITE:PS50179 SMART:SM00064 GO:GO:0006886
GO:GO:0031901 GO:GO:0046872 GO:GO:0032585 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 eggNOG:NOG257212 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 Gene3D:1.25.40.90 InterPro:IPR008942
SUPFAM:SSF48464 GO:GO:0046426 InterPro:IPR018205 SMART:SM00288
EMBL:BT026148 EMBL:BC111313 IPI:IPI00697763 RefSeq:NP_001039554.1
UniGene:Bt.6724 ProteinModelPortal:Q0V8S0 SMR:Q0V8S0 STRING:Q0V8S0
PRIDE:Q0V8S0 Ensembl:ENSBTAT00000000527 GeneID:511582
KEGG:bta:511582 CTD:9146 GeneTree:ENSGT00670000098022
HOGENOM:HOG000044175 HOVERGEN:HBG062917 InParanoid:Q0V8S0 KO:K12182
OMA:QEYLEMQ OrthoDB:EOG4H463C NextBio:20869998 InterPro:IPR024641
InterPro:IPR017073 Pfam:PF12210 PIRSF:PIRSF036956 Uniprot:Q0V8S0
Length = 777
Score = 129 (50.5 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 25/66 (37%), Positives = 33/66 (50%)
Query: 656 VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGK 715
VD C CR+ F ++H+C CG ++C CSSK S K RVC+ CF +
Sbjct: 161 VDAEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKYSTIPKFGIE--KEVRVCEPCFEQ 218
Query: 716 LTKATE 721
L K E
Sbjct: 219 LNKKAE 224
Score = 67 (28.6 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 24/99 (24%), Positives = 40/99 (40%)
Query: 871 KLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAE 930
KLR EE R+ Q+Q + RQ K+ + A R + K +L+ +
Sbjct: 492 KLRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEVQRQLAIQRLQEQE-KERQMRLEQQKQ 550
Query: 931 MLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQG 969
+ + A + S + A + + QPS P +F G
Sbjct: 551 TIQMRAQMPAFSLPYAQLQAMPAAGGVLYQPSGPASFAG 589
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 136 (52.9 bits), Expect = 4.3e-06, Sum P(4) = 4.3e-06
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 584 EIACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSF 643
+++CG +H +L +VYT+G G +G+LGHGD + R P+LV+AL + + G++
Sbjct: 844 QVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQ-VTAGSNH 902
Query: 644 TAAICL 649
TA + +
Sbjct: 903 TAILLM 908
Score = 122 (48.0 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 30/83 (36%), Positives = 43/83 (51%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGK-LPTRVEGKLTKNFVEEIACGDY 590
QVSCG +V L G VYT G +GQLG N + PT V+ + ++ G
Sbjct: 844 QVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS--TQVTAGSN 901
Query: 591 HVAVLTSRTEVYTWGKGANGRLG 613
H A+L +V+T+G + G+LG
Sbjct: 902 HTAILLMDGQVFTFGSFSKGQLG 924
Score = 98 (39.6 bits), Expect = 4.3e-06, Sum P(4) = 4.3e-06
Identities = 46/179 (25%), Positives = 73/179 (40%)
Query: 279 GIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGEELGGRLG 338
GI + G AG ++ + K S ++ ++ G HA LV G +F G G G
Sbjct: 460 GIKQGGPSAGKWVELPITK---SPKIIQF-SVGHDGSHALLVADDGSIFFTGSASKGEDG 515
Query: 339 HGV----DSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHG 394
S PK I ++ V AC + ++ G++Y +G +
Sbjct: 516 ESTKSRRQSKPYKPKKIIKMEGKIVISTACNNGSSSVISKDGELYMFGKDAI------YS 569
Query: 395 NEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVS 453
+ SL L+G V+ V+ G HT V+ G+++TFG G G D S+S
Sbjct: 570 DSTSLVTD------LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR-DTGSMS 621
Score = 77 (32.2 bits), Expect = 0.00027, Sum P(5) = 0.00027
Identities = 45/182 (24%), Positives = 73/182 (40%)
Query: 306 DVQNIACG-GRHAALV-TKQGEVFSWG--EELGGRLGH-GVDSDVSHPKLIDALKNINVE 360
D ++ G GR AL+ T G+++ G + LG + G V P + + K I
Sbjct: 428 DEESAVLGAGREFALMKTASGKIYYTGKYQSLGIKQGGPSAGKWVELP-ITKSPKIIQFS 486
Query: 361 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSL-WLPKKLNGPLEGIHVSSVSC 419
+ G H +T S G S + PKK+ +EG V S +C
Sbjct: 487 VGHDGSHALLVADDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKII-KMEGKIVISTAC 545
Query: 420 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAV 479
++V++ G+L+ FG + D S+ T LKG + A G HT +
Sbjct: 546 NNGSSSVISKDGELYMFGKDAI----YSDSTSLVT-----DLKGHFVTQVAMGKAHTCVL 596
Query: 480 VE 481
++
Sbjct: 597 MK 598
Score = 48 (22.0 bits), Expect = 0.00027, Sum P(5) = 0.00027
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 532 QVSCGHSLTVALTTTGHVYTMGSPVYGQLG 561
QV+ G + T L G V+T G GQ G
Sbjct: 585 QVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 614
Score = 41 (19.5 bits), Expect = 4.3e-06, Sum P(4) = 4.3e-06
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 899 EALAVAGEETAKCRAAKDVIKSLTAQLKDM 928
+ L A EE C A V+ ++ KD+
Sbjct: 1794 QLLNKANEEDKNCSRALSVVSAVVRAAKDL 1823
Score = 40 (19.1 bits), Expect = 5.3e-06, Sum P(4) = 5.3e-06
Identities = 16/63 (25%), Positives = 25/63 (39%)
Query: 877 EELTRKSQLQEIELERTTRQLKEALA---VAGEETAKCRAAKDVIKSLTAQLKDMAEMLP 933
E+ KS + E E+ TR + L+ +AGE L + D+ LP
Sbjct: 3514 EDEENKSNKENAEQEKDTRVCEHPLSDIVIAGEAA---HPLPHTFHRLLQTISDLMMSLP 3570
Query: 934 VGA 936
G+
Sbjct: 3571 SGS 3573
Score = 39 (18.8 bits), Expect = 4.3e-06, Sum P(4) = 4.3e-06
Identities = 16/71 (22%), Positives = 29/71 (40%)
Query: 744 VEHGENFVSRSHVQFGTSMESLKKVESGSSKRNKKQEFNRTRGLPLPNGVSQGNALNN-- 801
V+ ++ +H TS+E +K + + E + +PL V L N
Sbjct: 1678 VDDSDHTGDSTHSHRWTSLELVKGTYTTDDSPSDIAEIRLDKVVPLKENVKYAVRLRNYG 1737
Query: 802 SKSSNPVFGST 812
S+++N G T
Sbjct: 1738 SRTANGDGGMT 1748
>UNIPROTKB|H9KZT3 [details] [associations]
symbol:Gga.53772 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
GeneTree:ENSGT00550000074558 EMBL:AADN02025204
Ensembl:ENSGALT00000018570 OMA:HAQCSSL Uniprot:H9KZT3
Length = 332
Score = 139 (54.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 650 HKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVC 709
H W+ + + C C F+ R++H+C NCG ++C+ CSS + P+ KP RVC
Sbjct: 261 HTWLKDDEATHCKQCEKEFSISRRKHHCRNCGDIFCNACSSNELA----LPSYPKPVRVC 316
Query: 710 DNC 712
D C
Sbjct: 317 DTC 319
>POMBASE|SPAC19A8.05c [details] [associations]
symbol:sst4 "sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex subunit Sst4" species:4896
"Schizosaccharomyces pombe" [GO:0005628 "prospore membrane"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0006900 "membrane budding" evidence=IC] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0031321 "ascospore-type prospore
assembly" evidence=IGI] [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=ISO]
[GO:0033565 "ESCRT-0 complex" evidence=IPI] [GO:0043130 "ubiquitin
binding" evidence=IMP] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045053
"protein retention in Golgi apparatus" evidence=ISO] [GO:0045324
"late endosome to vacuole transport" evidence=IMP] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000306
InterPro:IPR002014 Pfam:PF00790 Pfam:PF01363 PROSITE:PS50179
SMART:SM00064 PomBase:SPAC19A8.05c Pfam:PF02809 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872
GO:GO:0006897 GO:GO:0010008 GO:GO:0005628 HSSP:P40343
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 eggNOG:NOG257212
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 Gene3D:1.25.40.90
InterPro:IPR008942 SUPFAM:SSF48464 GO:GO:0043130 GO:GO:0032266
GO:GO:0043328 GO:GO:0006900 GO:GO:0045053 GO:GO:0031321
InterPro:IPR018205 SMART:SM00288 KO:K12182 InterPro:IPR017073
PIRSF:PIRSF036956 GO:GO:0033565 OMA:VRVDDGC OrthoDB:EOG40VZXZ
PIR:T37956 RefSeq:NP_593787.1 ProteinModelPortal:O13821 SMR:O13821
STRING:O13821 EnsemblFungi:SPAC19A8.05c.1 GeneID:2542403
KEGG:spo:SPAC19A8.05c NextBio:20803462 Uniprot:O13821
Length = 610
Score = 153 (58.9 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 657 DQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKL 716
D +C CR PF F ++H+C NCG V+C+ CSSK + N +P RVCD+C+
Sbjct: 172 DSEVCLRCRTPFTFTNRKHHCRNCGGVFCNQCSSKTLSLPHLGIN--QPVRVCDSCYSLR 229
Query: 717 TK 718
TK
Sbjct: 230 TK 231
Score = 43 (20.2 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 883 SQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAEMLP-VGAVRNSN 941
SQ Q + E +LK A+A++ EE K + KD ++TA +M P V A S
Sbjct: 296 SQDQHLT-EDEDEELKRAIAISLEEAQKS-SQKD--DNVTAP-NNMNISYPSVPAHTVST 350
Query: 942 SFHSSP 947
SSP
Sbjct: 351 DIRSSP 356
Score = 38 (18.4 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 993 SQTEASHCEATTKNKNRTMKAEP 1015
S T A H ++ + NR+++ EP
Sbjct: 452 SSTYAHHYIDSSMDSNRSIEPEP 474
>WB|WBGene00014019 [details] [associations]
symbol:ZK632.12 species:6239 "Caenorhabditis elegans"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=ISS]
Pfam:PF00169 InterPro:IPR000306 InterPro:IPR001849 Pfam:PF01363
PROSITE:PS50003 SMART:SM00064 SMART:SM00233 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 EMBL:Z22181 GO:GO:0032266
GeneTree:ENSGT00680000099588 eggNOG:NOG308864 HOGENOM:HOG000231519
OMA:INKCVSD PIR:D88567 PIR:S40944 RefSeq:NP_499183.1
ProteinModelPortal:P34657 SMR:P34657 DIP:DIP-26764N IntAct:P34657
MINT:MINT-1042247 STRING:P34657 PaxDb:P34657
EnsemblMetazoa:ZK632.12.1 EnsemblMetazoa:ZK632.12.2 GeneID:176397
KEGG:cel:CELE_ZK632.12 UCSC:ZK632.12 CTD:176397 WormBase:ZK632.12
InParanoid:P34657 NextBio:892398 Uniprot:P34657
Length = 266
Score = 136 (52.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 652 WVSGVDQSMCSGC-RIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCD 710
WV + C C + FN ++RH+C NCG V C CSS+ + + KP RVCD
Sbjct: 149 WVPDGEAVKCMVCGKTQFNLVQRRHHCRNCGRVVCGACSSR-TFRIDNVHK--KPVRVCD 205
Query: 711 NCFGKLTKAT 720
+CF L+ AT
Sbjct: 206 HCFDSLSSAT 215
>UNIPROTKB|P34657 [details] [associations]
symbol:ZK632.12 "Uncharacterized protein ZK632.12"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00169 InterPro:IPR000306 InterPro:IPR001849
Pfam:PF01363 PROSITE:PS50003 SMART:SM00064 SMART:SM00233
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 EMBL:Z22181
GO:GO:0032266 GeneTree:ENSGT00680000099588 eggNOG:NOG308864
HOGENOM:HOG000231519 OMA:INKCVSD PIR:D88567 PIR:S40944
RefSeq:NP_499183.1 ProteinModelPortal:P34657 SMR:P34657
DIP:DIP-26764N IntAct:P34657 MINT:MINT-1042247 STRING:P34657
PaxDb:P34657 EnsemblMetazoa:ZK632.12.1 EnsemblMetazoa:ZK632.12.2
GeneID:176397 KEGG:cel:CELE_ZK632.12 UCSC:ZK632.12 CTD:176397
WormBase:ZK632.12 InParanoid:P34657 NextBio:892398 Uniprot:P34657
Length = 266
Score = 136 (52.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 652 WVSGVDQSMCSGC-RIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCD 710
WV + C C + FN ++RH+C NCG V C CSS+ + + KP RVCD
Sbjct: 149 WVPDGEAVKCMVCGKTQFNLVQRRHHCRNCGRVVCGACSSR-TFRIDNVHK--KPVRVCD 205
Query: 711 NCFGKLTKAT 720
+CF L+ AT
Sbjct: 206 HCFDSLSSAT 215
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 153 (58.9 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 76/311 (24%), Positives = 121/311 (38%)
Query: 352 DALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEG 411
D I+++ VA + HT +T +++ +G ++C G LG G + S +L L+G
Sbjct: 462 DLPSRISIKQVALSKTHTMVLTNDNELFGFGDNSC--GQLGFG-KFSKMENGRLVESLKG 518
Query: 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRISVSTPREVDSLKGLRTVRAA 470
+ SV G + + + G L TFG T LG G D + P ++ L
Sbjct: 519 RDIQSVGVGNYFSVICCDRGTLLTFG--TAKNLGLGKDAKDSAKPMLLEQLLRENIKDIY 576
Query: 471 CGVWHTAAVVEV--MVGXXXXXXXXXGKLFTWXXXXXXXXXXXXKEARLV--PTCVAALV 526
CG H AV+E +G G L T EA + P +
Sbjct: 577 CGHDHVVAVLESGECLGWGSNQYGQLG-LPTLEHFFAPTKVFFLNEATALYGPFQIPMPS 635
Query: 527 EPNFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANG------KLPTRVEGKLT-- 578
G T+ L+ G + MGS + +L + G K P K T
Sbjct: 636 NKKIVYGKAGKDATMLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTPNDYVNKPTIL 695
Query: 579 KNFVEEI---ACGDYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSL--VEALKDKQ 633
+ F E + + G YH V+ +V +G+ N LG G++ + V++L
Sbjct: 696 QGFPERVVDFSVGSYHSGVILESGQVMIFGRNDNTELGLGNSQKMAVRCVKPVKSLLHHA 755
Query: 634 VKSIVCGTSFT 644
++CG FT
Sbjct: 756 CTHVLCGDGFT 766
Score = 141 (54.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 43/173 (24%), Positives = 80/173 (46%)
Query: 278 GGIHRSGSYAGVKMDSFVPKAVESAVV-----LDVQNIACGGRHAALVTKQGEVFSWGEE 332
G + S S+ + D VP S++ + ++ +A H ++T E+F +G+
Sbjct: 436 GSMRSSVSFTTL-YDLHVPTITLSSIPDLPSRISIKQVALSKTHTMVLTNDNELFGFGDN 494
Query: 333 LGGRLGHGVDSDVSHPKLIDALKNINVELVACGEHHTCAVTLSGDMYTWGGSNCNFGLLG 392
G+LG G S + + +L+++LK +++ V G + + G + T+G + N GL G
Sbjct: 495 SCGQLGFGKFSKMENGRLVESLKGRDIQSVGVGNYFSVICCDRGTLLTFGTAK-NLGL-G 552
Query: 393 HGNEMSLWLPKKLNGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLG 445
+ S P L L ++ + CG H V +G+ +G +G LG
Sbjct: 553 KDAKDSA-KPMLLEQLLRE-NIKDIYCGHDHVVAVLESGECLGWGSNQYGQLG 603
Score = 43 (20.2 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 15/85 (17%), Positives = 32/85 (37%)
Query: 868 EVIKLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKD 927
E+I + A + +++++ T + L + +K + + Q+ D
Sbjct: 891 EIIPIDASKRRVRFDDSCEKLKIMDATAKQNSLLREIEDLKSKIKEQDTTFEGHRNQMSD 950
Query: 928 MAEMLPVGAVRNSNSFHSSPTPAWD 952
+ L + S S P PA+D
Sbjct: 951 LESKLQELQAKQSFLRKSEPPPAYD 975
Score = 37 (18.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 752 SRSHVQFGTSMESLKKVESGSSKRN 776
S+ V+F S E LK +++ ++K+N
Sbjct: 898 SKRRVRFDDSCEKLKIMDA-TAKQN 921
>UNIPROTKB|E1C396 [details] [associations]
symbol:HGS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0046426 "negative regulation of JAK-STAT
cascade" evidence=IEA] InterPro:IPR000306 InterPro:IPR002014
Pfam:PF00790 Pfam:PF01363 PROSITE:PS50179 SMART:SM00064
GO:GO:0006886 GO:GO:0046872 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
GO:GO:0005769 Gene3D:1.25.40.90 InterPro:IPR008942 SUPFAM:SSF48464
GO:GO:0046426 InterPro:IPR018205 SMART:SM00288
GeneTree:ENSGT00670000098022 InterPro:IPR024641 InterPro:IPR017073
Pfam:PF12210 PIRSF:PIRSF036956 EMBL:AADN02053584 IPI:IPI00585116
Ensembl:ENSGALT00000011691 Uniprot:E1C396
Length = 705
Score = 123 (48.4 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 24/66 (36%), Positives = 32/66 (48%)
Query: 656 VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGK 715
VD C CR+ F ++H+C CG ++C CSSK S K RVC+ C+
Sbjct: 161 VDAEECHRCRVQFGVVTRKHHCRACGQIFCGKCSSKYSTIPKFGIE--KEVRVCEPCYEH 218
Query: 716 LTKATE 721
L K E
Sbjct: 219 LNKKAE 224
Score = 69 (29.3 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 25/99 (25%), Positives = 41/99 (41%)
Query: 871 KLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAE 930
K+R EE R+ Q+Q + RQ K+ + A R + K +L+ +
Sbjct: 487 KVRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEMQRQLAIQRLQEQE-KERQMRLEQQKQ 545
Query: 931 MLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQG 969
+ + A + S + A +S I QPS P +F G
Sbjct: 546 TIQMRAQMPAFSLPYAQLQAMPAASGVIYQPSGPTSFPG 584
>UNIPROTKB|F1MM93 [details] [associations]
symbol:FGD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0035023
"regulation of Rho protein signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange
factor activity" evidence=IEA] Pfam:PF00169 InterPro:IPR000219
InterPro:IPR000306 InterPro:IPR001849 Pfam:PF00621 Pfam:PF01363
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00064 SMART:SM00233
SMART:SM00325 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 GO:GO:0035023 GeneTree:ENSGT00680000099588
OMA:YAAPQDM EMBL:DAAA02054987 IPI:IPI00711502 UniGene:Bt.11164
Ensembl:ENSBTAT00000018834 Uniprot:F1MM93
Length = 656
Score = 140 (54.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 35/123 (28%), Positives = 60/123 (48%)
Query: 597 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK-DKQVKSIVCGTSFTAAICLHKWVSG 655
S+ E+ +W + + + + F + V++ + D Q + + S + +WV
Sbjct: 403 SQEEMISWLQACQAAIDQIEKRNETFKAAVQSPEGDPQEQEL---QSVELGLRAPQWVRD 459
Query: 656 VDQSMCSGCRIPFN-FKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFG 714
+MC C+ PFN R+RH+C CG V C CS +A + + N+P RVC +C+
Sbjct: 460 KMVTMCMRCQEPFNALTRRRHHCRACGYVVCARCSD---YRAELKYDANRPNRVCLDCYT 516
Query: 715 KLT 717
LT
Sbjct: 517 FLT 519
>UNIPROTKB|E1C6V3 [details] [associations]
symbol:RUFY1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
OMA:AITSFEG GeneTree:ENSGT00550000074558 EMBL:AADN02028603
EMBL:AADN02028604 EMBL:AADN02028605 IPI:IPI00584008
Ensembl:ENSGALT00000009631 Uniprot:E1C6V3
Length = 681
Score = 140 (54.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 650 HKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVC 709
H W+ + + C C F+ R++H+C NCG ++C+ CSS + P+ KP RVC
Sbjct: 610 HTWLKDDEATHCKQCEKEFSISRRKHHCRNCGDIFCNACSSNELA----LPSYPKPVRVC 665
Query: 710 DNC 712
D+C
Sbjct: 666 DSC 668
>UNIPROTKB|G4N5N9 [details] [associations]
symbol:MGG_05277 "Alpha-tubulin suppressor protein Aats1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CM001233 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 KO:K15462
RefSeq:XP_003712836.1 EnsemblFungi:MGG_05277T0 GeneID:2675298
KEGG:mgr:MGG_05277 Uniprot:G4N5N9
Length = 382
Score = 84 (34.6 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 378 MYTWG-GSNCNFGLLGHGNEMSLWLPKK---LNGPLEGIHVSSVSCGPWHTAVVTSAGQL 433
+Y++G GS G LG G + + +P N P V +S H V S G +
Sbjct: 136 VYSFGCGSK---GELGQG-PLIIRVPFAQPIANFPPPETEVVGLSACMGHVVAVLSNGDV 191
Query: 434 FTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAACGVWHTAAVVE 481
+ +G+G G LG + I ++ PR+++ + + +AACG T V E
Sbjct: 192 YGWGNGRKGQLGAPEGI-ITEPRKIEGVP-FKVAKAACGKEFTCLVGE 237
Score = 75 (31.5 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 272 GDGILGGGIHRSGSYAGVKMDSFVPKAVESAVVLDVQNIACGGRHAALVTKQGEVFSWGE 331
G G LG G S + S + + V +A GG H L+T+ GE++S G+
Sbjct: 11 GSGQLGIGHKEDISVPKPALFSSAAGELSANPTSPVVQVAAGGNHTLLLTQDGEIYSSGD 70
Query: 332 ELGGRLG 338
G G
Sbjct: 71 PASGACG 77
Score = 73 (30.8 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 534 SC-GHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 588
+C GH VA+ + G VY G+ GQLG P+ P ++EG K V + ACG
Sbjct: 177 ACMGH--VVAVLSNGDVYGWGNGRKGQLGAPEGIITEPRKIEGVPFK--VAKAACG 228
Score = 72 (30.4 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 38/149 (25%), Positives = 62/149 (41%)
Query: 327 FSWGEELGGRLGHGVDSDVSHPKL---------IDALKNINVELVACGEHHTCAVTLSGD 377
F+ G G+LG G D+S PK + A V VA G +HT +T G+
Sbjct: 5 FALGSNGSGQLGIGHKEDISVPKPALFSSAAGELSANPTSPVVQVAAGGNHTLLLTQDGE 64
Query: 378 MYTWGG-SNCNFGLLGH-GNEMSLWLPK-----KLNGPLEGIHVSS--VSCGPWHTAVVT 428
+Y+ G ++ GL + P+ K++ P E S + W +++T
Sbjct: 65 IYSSGDPASGACGLKSATADSAGAGQPRPPVFHKIHVPAEQAAQSPGRLIAATWEASIIT 124
Query: 429 SAGQ-------LFTFGDGTFGVLGHGDRI 450
+ +++FG G+ G LG G I
Sbjct: 125 GPDEQGRRNRRVYSFGCGSKGELGQGPLI 153
Score = 67 (28.6 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 24/75 (32%), Positives = 32/75 (42%)
Query: 582 VEEIACGDYHV-AVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCG 640
+ +IA G HV A+ +R V WG G +G G DD N K I G
Sbjct: 302 MSQIAVGSEHVVAIDEARQSVAAWGWGEHGNCGPQVQDD-NSQGNTGWNVIASAKHIPPG 360
Query: 641 TSFTA--AICLHKWV 653
+S TA + C W+
Sbjct: 361 SSITAIGSGCATSWI 375
>POMBASE|SPAC10F6.04 [details] [associations]
symbol:SPAC10F6.04 "RCC domain protein Ats1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0007017 "microtubule-based process" evidence=ISO]
PomBase:SPAC10F6.04 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006400 GO:GO:0007017 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
KO:K15462 OrthoDB:EOG4H75MP PIR:T37498 RefSeq:NP_593255.1
ProteinModelPortal:O42645 STRING:O42645 EnsemblFungi:SPAC10F6.04.1
GeneID:2542973 KEGG:spo:SPAC10F6.04 OMA:WIVIEEN NextBio:20804007
Uniprot:O42645
Length = 351
Score = 129 (50.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 46/184 (25%), Positives = 83/184 (45%)
Query: 307 VQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKLIDALK---NINVE--- 360
++ I+CGG H L+ + ++++ G+ G+ G+ V + +P D L+ ++ E
Sbjct: 33 IEKISCGGNHTLLLDEDSQLWACGDNRKGQCGYEVKEPLYNPLSPDYLRIFTRVSHERWV 92
Query: 361 LVACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPL--EGIHVSSVS 418
+ CG + V G + G LG GN + ++++ P + + +S
Sbjct: 93 FLTCGWEFSVIVHADRRRVCSCGEGLS-GELGQGNRSNSQGLREIDIPYLDDKEFIIDIS 151
Query: 419 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSTPREVDSLKGLRTVRAA-CGVWHTA 477
G H VT+ G L+ GDG G LG + + T +V L + +A CGV +A
Sbjct: 152 AGLRHWICVTNEGNLYGCGDGRKGQLGP---VVMKTVNKVSFLGRIEHAQAVVCGVQFSA 208
Query: 478 AVVE 481
+ E
Sbjct: 209 VLQE 212
Score = 51 (23.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 22/91 (24%), Positives = 33/91 (36%)
Query: 529 NFCQVSCGHSLTVALTTTGHVYTMGSPVYGQLGDPKANGKLPTRVEGKLTKNFVEEIACG 588
+ C +S S L+T G VY G Q KA+ + +IA G
Sbjct: 243 SICSISANWSTLSLLSTEGCVYAFGRCDRAQKAHTKASD--------------IVQIASG 288
Query: 589 DYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 619
H + T + V +G +G + D D
Sbjct: 289 TEHNILRTKKGSVLIYGWNEHGNASNDDKRD 319
Score = 47 (21.6 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 533 VSCGHSLTVALTTTGHVYTMG 553
V CG + L TGHV +G
Sbjct: 200 VVCGVQFSAVLQETGHVIVLG 220
>UNIPROTKB|Q49AA1 [details] [associations]
symbol:ZFYVE28 "ZFYVE28 protein" species:9606 "Homo
sapiens" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 EMBL:AL158068
EMBL:AL645924 UniGene:Hs.292056 HGNC:HGNC:29334
HOGENOM:HOG000113403 EMBL:BC041866 IPI:IPI00968206 SMR:Q49AA1
STRING:Q49AA1 Ensembl:ENST00000508471 HOVERGEN:HBG071045
Uniprot:Q49AA1
Length = 192
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 651 KWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPN----KPY 706
+WV C+ C+ PF R++H+C +CG ++C CSS AP P KP
Sbjct: 118 EWVPDEACGFCTACKAPFTVIRRKHHCRSCGKIFCSRCSSHS------APLPRYGQVKPV 171
Query: 707 RVCDNCF 713
RVC +C+
Sbjct: 172 RVCTHCY 178
>UNIPROTKB|E2QWE3 [details] [associations]
symbol:HGS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046426 "negative regulation of JAK-STAT
cascade" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000306
InterPro:IPR002014 Pfam:PF00790 Pfam:PF01363 PROSITE:PS50179
SMART:SM00064 GO:GO:0006886 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 GO:GO:0005769 Gene3D:1.25.40.90 InterPro:IPR008942
SUPFAM:SSF48464 GO:GO:0046426 InterPro:IPR018205 SMART:SM00288
CTD:9146 GeneTree:ENSGT00670000098022 KO:K12182 OMA:QEYLEMQ
InterPro:IPR024641 InterPro:IPR017073 Pfam:PF12210
PIRSF:PIRSF036956 EMBL:AAEX03006169 RefSeq:XP_540486.2
Ensembl:ENSCAFT00000009350 GeneID:483367 KEGG:cfa:483367
Uniprot:E2QWE3
Length = 782
Score = 125 (49.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 24/66 (36%), Positives = 33/66 (50%)
Query: 656 VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGK 715
VD C CR+ F ++H+C CG ++C CSSK S K RVC+ C+ +
Sbjct: 161 VDAEECHRCRVQFGVVTRKHHCRACGQIFCGKCSSKYSTIPKFGIE--KEVRVCEPCYEQ 218
Query: 716 LTKATE 721
L K E
Sbjct: 219 LNKKAE 224
Score = 65 (27.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 24/99 (24%), Positives = 40/99 (40%)
Query: 871 KLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAE 930
KLR EE R+ Q+Q + RQ K+ + A R + K +L+ +
Sbjct: 497 KLRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEVQRQLAIQRLQEQE-KERQLRLEQQKQ 555
Query: 931 MLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQG 969
+ + A + S + A + + QPS P +F G
Sbjct: 556 TIQMRAQMPAFSLPYAQLQAMPPAGGVLYQPSGPTSFPG 594
>CGD|CAL0001436 [details] [associations]
symbol:ATS1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] [GO:0007117 "budding cell
bud growth" evidence=IEA] INTERPRO:IPR000408 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000073 PRINTS:PR00633
PROSITE:PS00626 eggNOG:COG5184 KO:K15462 RefSeq:XP_716156.1
ProteinModelPortal:Q5A364 STRING:Q5A364 GeneID:3642213
KEGG:cal:CaO19.13757 CGD:CAL0062057 Uniprot:Q5A364
Length = 336
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 42/135 (31%), Positives = 63/135 (46%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD---SDVSHPKLIDALKNINVELV 362
D +I+CG + LV + GEV+ G L G LG G + S++ + +D K E+
Sbjct: 93 DWLDISCGWEFSILVKRSGEVYVCGRGLKGELGLGKETPESELIYSTTVDGFK----EIK 148
Query: 363 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 422
+C +H T T +G + WG N G LG + +W PK L G+ S G
Sbjct: 149 SCMQH-TIIQTTNG-LVGWG--NSRKGQLGETEDKIMWTPKTLRF---GVVCKDFSLGRE 201
Query: 423 HTAVVTSAGQLFTFG 437
TA+ T ++ FG
Sbjct: 202 FTAIQTDTNRVKIFG 216
>UNIPROTKB|Q5A364 [details] [associations]
symbol:ATS1 "Putative uncharacterized protein ATS1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AACQ01000073 PRINTS:PR00633 PROSITE:PS00626 eggNOG:COG5184
KO:K15462 RefSeq:XP_716156.1 ProteinModelPortal:Q5A364
STRING:Q5A364 GeneID:3642213 KEGG:cal:CaO19.13757 CGD:CAL0062057
Uniprot:Q5A364
Length = 336
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 42/135 (31%), Positives = 63/135 (46%)
Query: 306 DVQNIACGGRHAALVTKQGEVFSWGEELGGRLGHGVD---SDVSHPKLIDALKNINVELV 362
D +I+CG + LV + GEV+ G L G LG G + S++ + +D K E+
Sbjct: 93 DWLDISCGWEFSILVKRSGEVYVCGRGLKGELGLGKETPESELIYSTTVDGFK----EIK 148
Query: 363 ACGEHHTCAVTLSGDMYTWGGSNCNFGLLGHGNEMSLWLPKKLNGPLEGIHVSSVSCGPW 422
+C +H T T +G + WG N G LG + +W PK L G+ S G
Sbjct: 149 SCMQH-TIIQTTNG-LVGWG--NSRKGQLGETEDKIMWTPKTLRF---GVVCKDFSLGRE 201
Query: 423 HTAVVTSAGQLFTFG 437
TA+ T ++ FG
Sbjct: 202 FTAIQTDTNRVKIFG 216
>UNIPROTKB|H9KVG3 [details] [associations]
symbol:Zfyve26 "Zinc finger FYVE domain-containing protein
26" species:10116 "Rattus norvegicus" [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 RGD:1307820 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 Ensembl:ENSRNOT00000058448
Uniprot:H9KVG3
Length = 413
Score = 133 (51.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 27/69 (39%), Positives = 35/69 (50%)
Query: 651 KWVSGVDQSMCSGC-RIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVC 709
+WV +SMC C R F +RH+C CG + C +CS+KK V NP RVC
Sbjct: 310 QWVPDETESMCMVCCREHFTMFNRRHHCRRCGRLVCGSCSTKKMVVEGCRENPT---RVC 366
Query: 710 DNCFGKLTK 718
D C+ K
Sbjct: 367 DQCYSYYNK 375
>TAIR|locus:2036655 [details] [associations]
symbol:AT1G42680 species:3702 "Arabidopsis thaliana"
[GO:0003774 "motor activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016459 "myosin complex" evidence=IEA] InterPro:IPR001609
Pfam:PF00063 PRINTS:PR00193 SMART:SM00242 EMBL:CP002684
GO:GO:0005524 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0003774
GO:GO:0016459 IPI:IPI00526579 RefSeq:NP_174989.2 UniGene:At.52000
ProteinModelPortal:F4I9H4 SMR:F4I9H4 PRIDE:F4I9H4
EnsemblPlants:AT1G42680.1 GeneID:840876 KEGG:ath:AT1G42680
ArrayExpress:F4I9H4 Uniprot:F4I9H4
Length = 170
Score = 119 (46.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 47 DESILIWISGKEEKHLKLSHVSRIIPGQRTPIF 79
DES L+W SGKEEK +KLS V RI+PGQRT F
Sbjct: 21 DESALVWYSGKEEKQIKLSQVLRIVPGQRTISF 53
>RGD|69225 [details] [associations]
symbol:Hgs "hepatocyte growth factor-regulated tyrosine kinase
substrate" species:10116 "Rattus norvegicus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005768 "endosome" evidence=ISO] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008333
"endosome to lysosome transport" evidence=IMP] [GO:0016020
"membrane" evidence=IDA] [GO:0019904 "protein domain specific
binding" evidence=ISO;NAS] [GO:0030141 "secretory granule"
evidence=IDA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0032585 "multivesicular body membrane" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO] [GO:0046426
"negative regulation of JAK-STAT cascade" evidence=IEA;ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000306
InterPro:IPR002014 Pfam:PF00790 Pfam:PF01363 PROSITE:PS50179
SMART:SM00064 RGD:69225 GO:GO:0005829 GO:GO:0019904 GO:GO:0006886
GO:GO:0031901 GO:GO:0016020 GO:GO:0046872 GO:GO:0030141
GO:GO:0032585 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 eggNOG:NOG257212 GO:GO:0008333 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 Gene3D:1.25.40.90 InterPro:IPR008942
SUPFAM:SSF48464 GO:GO:0046426 InterPro:IPR018205 SMART:SM00288
CTD:9146 HOVERGEN:HBG062917 KO:K12182 OrthoDB:EOG4H463C
InterPro:IPR024641 InterPro:IPR017073 Pfam:PF12210 PIRSF:PIRSF036956
EMBL:U87863 EMBL:AB002811 EMBL:AF036344 EMBL:BC083561
IPI:IPI00201027 IPI:IPI00208700 RefSeq:NP_062260.2 UniGene:Rn.21
ProteinModelPortal:Q9JJ50 SMR:Q9JJ50 MINT:MINT-107197 STRING:Q9JJ50
PhosphoSite:Q9JJ50 PRIDE:Q9JJ50 GeneID:56084 KEGG:rno:56084
NextBio:611106 ArrayExpress:Q9JJ50 Genevestigator:Q9JJ50
Uniprot:Q9JJ50
Length = 776
Score = 125 (49.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 24/66 (36%), Positives = 33/66 (50%)
Query: 656 VDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGK 715
VD C CR+ F ++H+C CG ++C CSSK S K RVC+ C+ +
Sbjct: 161 VDAEECHRCRVQFGVVTRKHHCRACGQIFCGKCSSKYSTIPKFGIE--KEVRVCEPCYEQ 218
Query: 716 LTKATE 721
L K E
Sbjct: 219 LNKKAE 224
Score = 61 (26.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 23/99 (23%), Positives = 39/99 (39%)
Query: 871 KLRAQVEELTRKSQLQEIELERTTRQLKEALAVAGEETAKCRAAKDVIKSLTAQLKDMAE 930
KLR EE R+ Q+Q + RQ K+ + A R + K +L+ +
Sbjct: 493 KLRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEVQRQLAIQRLQEQE-KERQMRLEQQKQ 551
Query: 931 MLPVGAVRNSNSFHSSPTPAWDVSSAAIEQPSSPLTFQG 969
+ + A + + A + + QPS P +F G
Sbjct: 552 TVQMRAQMPAFPLPYAQLQAMPTAGGVLYQPSGPTSFPG 590
>UNIPROTKB|F1P8C3 [details] [associations]
symbol:RUFY1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
GeneTree:ENSGT00550000074558 EMBL:AAEX03007686
Ensembl:ENSCAFT00000000538 Uniprot:F1P8C3
Length = 701
Score = 135 (52.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 650 HKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVC 709
H W+ + + C C F+ R++H+C +CG ++C+ CSS + P+ KP RVC
Sbjct: 630 HTWLKDDEATHCKQCEKEFSISRRKHHCRHCGHIFCNMCSSNELA----LPSYPKPVRVC 685
Query: 710 DNC 712
D+C
Sbjct: 686 DSC 688
>ASPGD|ASPL0000051373 [details] [associations]
symbol:vps27 species:162425 "Emericella nidulans"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0031321
"ascospore-type prospore assembly" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0043328 "protein targeting to
vacuole involved in ubiquitin-dependent protein catabolic process
via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0033565
"ESCRT-0 complex" evidence=IEA] [GO:0005628 "prospore membrane"
evidence=IEA] InterPro:IPR000306 InterPro:IPR002014 Pfam:PF00790
Pfam:PF01363 PROSITE:PS50179 SMART:SM00064 GO:GO:0006886
GO:GO:0046872 EMBL:BN001307 GO:GO:0010008 EMBL:AACD01000032
HSSP:P40343 Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 eggNOG:NOG257212
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 Gene3D:1.25.40.90
InterPro:IPR008942 SUPFAM:SSF48464 InterPro:IPR018205 SMART:SM00288
KO:K12182 InterPro:IPR017073 PIRSF:PIRSF036956 RefSeq:XP_659675.1
ProteinModelPortal:Q5BBK9 SMR:Q5BBK9 STRING:Q5BBK9
EnsemblFungi:CADANIAT00008741 GeneID:2875371 KEGG:ani:AN2071.2
HOGENOM:HOG000048363 OMA:VRVDDGC OrthoDB:EOG40VZXZ Uniprot:Q5BBK9
Length = 715
Score = 135 (52.6 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 34/117 (29%), Positives = 54/117 (46%)
Query: 601 VYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIVCGTSFTAAICLHKWVSGVDQSM 660
+ W A GR+ + +E + KS + G+ ++ +W+ D +
Sbjct: 116 IQDWAMAAQGRMDLSYLGETYRKLQMEGFQFPP-KSAISGSMLESS-APPEWI---DSDV 170
Query: 661 CSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFGKLT 717
C CR PF+F ++H+C NCG V+ CSSK + +P RV D C+ KLT
Sbjct: 171 CMRCRTPFSFMNRKHHCRNCGNVFDAQCSSKTLPLPHLGIL--QPVRVDDGCYAKLT 225
>UNIPROTKB|J9NZ03 [details] [associations]
symbol:RUFY1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
OMA:AITSFEG GeneTree:ENSGT00550000074558 EMBL:AAEX03007686
Ensembl:ENSCAFT00000047107 Uniprot:J9NZ03
Length = 744
Score = 135 (52.6 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 650 HKWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVC 709
H W+ + + C C F+ R++H+C +CG ++C+ CSS + P+ KP RVC
Sbjct: 673 HTWLKDDEATHCKQCEKEFSISRRKHHCRHCGHIFCNMCSSNELA----LPSYPKPVRVC 728
Query: 710 DNC 712
D+C
Sbjct: 729 DSC 731
>ZFIN|ZDB-GENE-041111-270 [details] [associations]
symbol:eea1 "early endosome antigen 1" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS50157 SMART:SM00064 SMART:SM00355
ZFIN:ZDB-GENE-041111-270 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 KO:K12478
GeneTree:ENSGT00700000104373 EMBL:CR854977 EMBL:CR753897
EMBL:CT573156 IPI:IPI00961262 RefSeq:XP_003200485.1
Ensembl:ENSDART00000091349 GeneID:562943 KEGG:dre:562943
NextBio:20884663 Bgee:F1QS51 Uniprot:F1QS51
Length = 1398
Score = 138 (53.6 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 651 KWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCD 710
KW + C C F+ ++H+C +CG ++C CS++ + + P+ KP RVCD
Sbjct: 1335 KWTEDHEVQNCMACGKGFSVTVRKHHCRHCGNIFCAECSARNA----LTPSSKKPVRVCD 1390
Query: 711 NCFGKL 716
NCF +L
Sbjct: 1391 NCFDEL 1396
>UNIPROTKB|F1RVS7 [details] [associations]
symbol:FGD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0035023
"regulation of Rho protein signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange
factor activity" evidence=IEA] Pfam:PF00169 InterPro:IPR000219
InterPro:IPR000306 InterPro:IPR001849 Pfam:PF00621 Pfam:PF01363
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00064 SMART:SM00233
SMART:SM00325 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 GO:GO:0035023 GeneTree:ENSGT00680000099588
CTD:221472 KO:K05721 OMA:YAAPQDM EMBL:CT841548
RefSeq:XP_003128417.1 Ensembl:ENSSSCT00000001751 GeneID:100524814
KEGG:ssc:100524814 Uniprot:F1RVS7
Length = 656
Score = 134 (52.2 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 33/123 (26%), Positives = 58/123 (47%)
Query: 597 SRTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK-DKQVKSIVCGTSFTAAICLHKWVSG 655
S+ E+ +W + + + + F + + + D Q + + S + +W+
Sbjct: 403 SQEEMISWMQACQAAIDQIEKRNETFKAAAQGPEGDAQEQEL---QSEELGLRAPQWIRD 459
Query: 656 VDQSMCSGCRIPFN-FKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDNCFG 714
+MC C+ PFN R+RH+C CG V C CS +A + + N+P RVC +C+
Sbjct: 460 KMVTMCMRCQEPFNALTRRRHHCRACGYVVCGRCSD---YRAELKYDDNRPNRVCFDCYT 516
Query: 715 KLT 717
LT
Sbjct: 517 FLT 519
>ZFIN|ZDB-GENE-040426-1289 [details] [associations]
symbol:plekhf1 "pleckstrin homology domain
containing, family F (with FYVE domain) member 1" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005543 "phospholipid binding" evidence=IEA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 PROSITE:PS50003 SMART:SM00064
SMART:SM00233 ZFIN:ZDB-GENE-040426-1289 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
GeneTree:ENSGT00680000099588 HSSP:Q15075 CTD:79156
HOGENOM:HOG000231519 HOVERGEN:HBG059973 EMBL:CR352229 EMBL:BC053138
IPI:IPI00503726 RefSeq:NP_956634.1 UniGene:Dr.80998
Ensembl:ENSDART00000036597 GeneID:393311 KEGG:dre:393311
eggNOG:NOG270041 InParanoid:Q7T3F6 OMA:MEHIEEC OrthoDB:EOG48WC3D
NextBio:20814363 Uniprot:Q7T3F6
Length = 293
Score = 128 (50.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 652 WVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCDN 711
W+ V ++C C F +RH+C CG + C CS ++V ++ N+P RVC N
Sbjct: 152 WIPDVASAICMRCSKRFTVANRRHHCRRCGYIVCQACSKGRAVLPHIS---NRPVRVCRN 208
Query: 712 CFGKLT 717
C +T
Sbjct: 209 CKNDMT 214
>UNIPROTKB|F1SQ11 [details] [associations]
symbol:EEA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0030742 "GTP-dependent protein binding"
evidence=IEA] [GO:0019897 "extrinsic to plasma membrane"
evidence=IEA] [GO:0006906 "vesicle fusion" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0005969
"serine-pyruvate aminotransferase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0005545 "1-phosphatidylinositol binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00064
SMART:SM00355 GO:GO:0005829 GO:GO:0046872 GO:GO:0005545
GO:GO:0008270 GO:GO:0006897 GO:GO:0019897 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0005769 GO:GO:0006906
OMA:LKEQCKT GO:GO:0005969 GeneTree:ENSGT00700000104373
EMBL:CU457729 EMBL:FP102822 Ensembl:ENSSSCT00000000996
Uniprot:F1SQ11
Length = 1411
Score = 137 (53.3 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 651 KWVSGVDQSMCSGCRIPFNFKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVCD 710
KW + C C F+ +RH+C CG ++C CS+K + + P+ KP RVCD
Sbjct: 1348 KWAEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNA----LTPSSKKPVRVCD 1403
Query: 711 NCFGKL 716
+CF L
Sbjct: 1404 SCFNDL 1409
>UNIPROTKB|Q7Z6J4 [details] [associations]
symbol:FGD2 "FYVE, RhoGEF and PH domain-containing protein
2" species:9606 "Homo sapiens" [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] [GO:0032587 "ruffle membrane" evidence=IEA]
[GO:0001726 "ruffle" evidence=ISS] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0007010 "cytoskeleton organization" evidence=ISS]
[GO:0008360 "regulation of cell shape" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISS] [GO:0030036 "actin
cytoskeleton organization" evidence=ISS] [GO:0031267 "small GTPase
binding" evidence=ISS] [GO:0043088 "regulation of Cdc42 GTPase
activity" evidence=ISS] [GO:0046847 "filopodium assembly"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0051056 "regulation of small
GTPase mediated signal transduction" evidence=TAS] Pfam:PF00169
InterPro:IPR000219 InterPro:IPR000306 InterPro:IPR001849
Pfam:PF00621 Pfam:PF01363 PROSITE:PS50003 PROSITE:PS50010
SMART:SM00064 SMART:SM00233 SMART:SM00325 GO:GO:0005829
GO:GO:0005634 GO:GO:0005794 Reactome:REACT_111102 GO:GO:0006915
GO:GO:0048011 GO:GO:0007264 GO:GO:0031901 GO:GO:0008360
GO:GO:0005856 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 GO:GO:0030036 GO:GO:0030027 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 GO:GO:0005085 GO:GO:0001726
GO:GO:0032587 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 GO:GO:0046847 GO:GO:0043088 HOVERGEN:HBG007506
GO:GO:0031267 EMBL:AK024456 EMBL:AK097230 EMBL:AK131079
EMBL:AL160264 EMBL:BC023645 EMBL:BC053655 IPI:IPI00217865
IPI:IPI00384678 IPI:IPI00386320 IPI:IPI00442361 RefSeq:NP_775829.2
UniGene:Hs.509664 ProteinModelPortal:Q7Z6J4 SMR:Q7Z6J4
STRING:Q7Z6J4 PhosphoSite:Q7Z6J4 DMDM:61213572 PaxDb:Q7Z6J4
PRIDE:Q7Z6J4 DNASU:221472 Ensembl:ENST00000274963 GeneID:221472
KEGG:hsa:221472 UCSC:uc003ong.2 UCSC:uc003onj.1 CTD:221472
GeneCards:GC06P036973 HGNC:HGNC:3664 HPA:HPA029145 MIM:605091
neXtProt:NX_Q7Z6J4 PharmGKB:PA28103 eggNOG:NOG284234 KO:K05721
OMA:YAAPQDM OrthoDB:EOG4R23TD PhylomeDB:Q7Z6J4 ChiTaRS:FGD2
GenomeRNAi:221472 NextBio:91355 ArrayExpress:Q7Z6J4 Bgee:Q7Z6J4
CleanEx:HS_FGD2 Genevestigator:Q7Z6J4 GermOnline:ENSG00000146192
Uniprot:Q7Z6J4
Length = 655
Score = 133 (51.9 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 651 KWVSGVDQSMCSGCRIPFN-FKRKRHNCYNCGLVYCHTCSSKKSVKASMAPNPNKPYRVC 709
+WV +MC C+ PFN R+RH+C CG V C CS +A + + N+P RVC
Sbjct: 454 QWVRDKMVTMCMRCQEPFNALTRRRHHCRACGYVVCARCSD---YRAELKYDDNRPNRVC 510
Query: 710 DNCFGKLT 717
+C+ LT
Sbjct: 511 LHCYAFLT 518
WARNING: HSPs involving 49 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1092 986 0.00098 122 3 11 22 0.43 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 299
No. of states in DFA: 632 (67 KB)
Total size of DFA: 474 KB (2221 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 87.63u 0.17s 87.80t Elapsed: 00:00:04
Total cpu time: 87.78u 0.18s 87.96t Elapsed: 00:00:04
Start: Tue May 21 12:16:00 2013 End: Tue May 21 12:16:04 2013
WARNINGS ISSUED: 2