Query 001365
Match_columns 1092
No_of_seqs 810 out of 3789
Neff 6.1
Searched_HMMs 29240
Date Tue Mar 26 00:25:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001365.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001365hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1oy3_D Transcription factor in 100.0 1.4E-33 4.7E-38 304.8 21.3 254 534-830 5-265 (282)
2 1wdy_A 2-5A-dependent ribonucl 100.0 1.6E-32 5.5E-37 295.3 27.4 236 536-820 37-283 (285)
3 2xai_A ASB-9, ankyrin repeat a 100.0 2.4E-33 8.1E-38 303.8 20.3 232 537-826 2-241 (261)
4 1wdy_A 2-5A-dependent ribonucl 100.0 2.3E-32 8E-37 294.1 27.8 252 537-846 4-281 (285)
5 1yyh_A HN1;, notch 1, ankyrin 100.0 6.9E-33 2.4E-37 298.4 23.4 222 534-808 6-246 (253)
6 1n11_A Ankyrin; clathrin, BAND 100.0 3E-32 1E-36 315.4 29.1 291 537-846 46-372 (437)
7 1n11_A Ankyrin; clathrin, BAND 100.0 4.9E-32 1.7E-36 313.5 29.3 251 538-828 113-382 (437)
8 1k1a_A B-cell lymphoma 3-encod 100.0 8.5E-33 2.9E-37 292.2 19.6 225 534-808 5-239 (241)
9 3utm_A Tankyrase-1; tankyrase, 100.0 5.3E-32 1.8E-36 300.6 26.8 260 535-834 55-324 (351)
10 3d9h_A CDNA FLJ77766, highly s 100.0 2E-32 6.7E-37 301.4 20.2 216 534-807 55-275 (285)
11 3b7b_A Euchromatic histone-lys 100.0 1.2E-31 4.2E-36 283.5 24.4 219 534-806 7-231 (237)
12 4g8k_A 2-5A-dependent ribonucl 100.0 2E-31 6.9E-36 298.2 27.3 243 538-808 25-324 (337)
13 4g8k_A 2-5A-dependent ribonucl 100.0 2.5E-31 8.6E-36 297.5 27.9 232 572-819 24-302 (337)
14 4b93_B Ankyrin repeat domain-c 100.0 5.4E-33 1.8E-37 304.9 14.1 223 535-808 8-242 (269)
15 3ljn_A Hypothetical protein; a 100.0 1.2E-32 4.1E-37 311.4 16.1 237 534-809 16-268 (364)
16 3aji_A 26S proteasome non-ATPa 100.0 1.4E-31 4.8E-36 281.9 21.2 218 538-808 6-228 (231)
17 3d9h_A CDNA FLJ77766, highly s 100.0 2.3E-31 7.7E-36 292.9 23.3 234 536-828 13-260 (285)
18 2fo1_E LIN-12 protein; beta-ba 100.0 1.3E-31 4.6E-36 306.0 19.5 223 536-809 123-370 (373)
19 2dzn_A Probable 26S proteasome 100.0 3.5E-30 1.2E-34 270.3 22.5 204 538-827 2-212 (228)
20 3eu9_A Huntingtin-interacting 100.0 5.3E-30 1.8E-34 269.2 23.7 221 535-809 6-234 (240)
21 2f8y_A Notch homolog 1, transl 100.0 3.7E-30 1.3E-34 269.6 19.7 193 536-810 23-216 (223)
22 2fo1_E LIN-12 protein; beta-ba 100.0 7E-31 2.4E-35 300.1 14.0 235 535-829 91-352 (373)
23 2rfa_A Transient receptor pote 100.0 7.4E-30 2.5E-34 269.4 20.2 195 538-808 3-220 (232)
24 3b7b_A Euchromatic histone-lys 100.0 4.7E-29 1.6E-33 263.7 24.6 209 565-830 3-217 (237)
25 1yyh_A HN1;, notch 1, ankyrin 100.0 9.9E-30 3.4E-34 273.8 18.7 217 568-837 5-238 (253)
26 1s70_B 130 kDa myosin-binding 100.0 2.9E-29 9.8E-34 274.6 21.4 233 537-806 39-286 (299)
27 1ikn_D Protein (I-kappa-B-alph 100.0 3E-30 1E-34 273.9 11.8 206 535-825 5-221 (236)
28 4gpm_A Engineered protein OR26 100.0 5.3E-29 1.8E-33 255.4 20.7 155 540-809 6-160 (169)
29 3hra_A Ankyrin repeat family p 100.0 1E-28 3.5E-33 254.5 22.2 190 537-808 4-201 (201)
30 1k1a_A B-cell lymphoma 3-encod 100.0 6.9E-29 2.4E-33 262.2 20.9 213 568-837 4-231 (241)
31 2xai_A ASB-9, ankyrin repeat a 100.0 1.3E-28 4.4E-33 266.6 21.8 198 572-828 2-204 (261)
32 4b93_B Ankyrin repeat domain-c 100.0 7.6E-29 2.6E-33 271.9 19.1 206 568-830 6-225 (269)
33 2etb_A Transient receptor pote 100.0 2.3E-29 7.7E-34 270.4 13.8 208 538-808 2-244 (256)
34 3kea_A K1L; tropism, ANK repea 100.0 2.8E-29 9.7E-34 276.4 13.6 213 532-808 25-244 (285)
35 3utm_A Tankyrase-1; tankyrase, 100.0 1.3E-27 4.5E-32 265.2 26.3 252 536-846 22-308 (351)
36 2pnn_A Transient receptor pote 100.0 7.7E-29 2.6E-33 269.1 13.6 223 534-823 9-267 (273)
37 3ljn_A Hypothetical protein; a 100.0 1.9E-28 6.5E-33 277.0 16.8 209 568-830 15-251 (364)
38 1oy3_D Transcription factor in 100.0 3.3E-28 1.1E-32 262.7 16.9 215 534-796 41-269 (282)
39 2dzn_A Probable 26S proteasome 100.0 6.6E-28 2.3E-32 253.0 18.0 190 534-806 32-226 (228)
40 3aji_A 26S proteasome non-ATPa 100.0 3.9E-27 1.3E-31 248.0 22.7 202 572-830 5-212 (231)
41 1s70_B 130 kDa myosin-binding 100.0 5.2E-28 1.8E-32 264.6 16.1 227 544-827 4-269 (299)
42 3kea_A K1L; tropism, ANK repea 99.9 8.4E-28 2.9E-32 264.7 15.9 209 549-821 11-226 (285)
43 3jxi_A Vanilloid receptor-rela 99.9 7.4E-28 2.5E-32 258.8 12.6 210 537-809 4-249 (260)
44 2f8y_A Notch homolog 1, transl 99.9 1.4E-26 4.9E-31 242.3 22.1 164 534-773 54-218 (223)
45 3eu9_A Huntingtin-interacting 99.9 3.6E-26 1.2E-30 240.0 21.8 207 568-830 4-217 (240)
46 4hbd_A KN motif and ankyrin re 99.9 9.1E-27 3.1E-31 255.5 15.6 195 539-808 77-273 (276)
47 2rfm_A Putative ankyrin repeat 99.9 3.8E-26 1.3E-30 235.0 17.3 108 695-808 83-190 (192)
48 2y1l_E Darpin-8.4; hydrolase-i 99.9 9.8E-26 3.3E-30 227.9 19.9 157 537-808 13-169 (169)
49 1ihb_A P18-INK4C(INK6), cyclin 99.9 5.8E-26 2E-30 226.3 17.6 109 695-809 52-161 (162)
50 3v30_A DNA-binding protein rfx 99.9 3.8E-26 1.3E-30 230.6 16.4 121 695-826 51-171 (172)
51 3v31_A Ankyrin repeat family A 99.9 1.4E-25 4.6E-30 225.4 18.0 108 695-808 51-158 (167)
52 3f6q_A Integrin-linked protein 99.9 2.2E-25 7.4E-30 227.1 16.5 168 536-823 3-171 (179)
53 2rfa_A Transient receptor pote 99.9 5.6E-25 1.9E-29 232.0 20.0 178 572-829 2-203 (232)
54 1awc_B Protein (GA binding pro 99.9 7.2E-25 2.4E-29 217.6 19.2 150 539-804 3-152 (153)
55 1sw6_A Regulatory protein SWI6 99.9 1E-25 3.5E-30 253.0 12.8 194 540-827 99-320 (327)
56 3twr_A Tankyrase-2; ankyrin re 99.9 4.9E-25 1.7E-29 221.0 14.7 108 695-809 57-164 (165)
57 1ikn_D Protein (I-kappa-B-alph 99.9 2E-25 6.8E-30 236.8 11.9 138 695-843 60-209 (236)
58 4gpm_A Engineered protein OR26 99.9 1.2E-24 4.2E-29 222.9 17.0 124 695-829 19-142 (169)
59 2etb_A Transient receptor pote 99.9 9.1E-25 3.1E-29 234.5 16.2 176 572-830 1-228 (256)
60 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.8E-24 9.6E-29 213.1 18.1 106 695-807 50-155 (156)
61 1sw6_A Regulatory protein SWI6 99.9 1.3E-25 4.4E-30 252.3 9.1 192 534-796 127-327 (327)
62 3hra_A Ankyrin repeat family p 99.9 1.2E-23 4.2E-28 216.5 21.2 173 571-828 3-183 (201)
63 2pnn_A Transient receptor pote 99.9 2.3E-24 7.9E-29 233.9 15.2 191 534-790 50-272 (273)
64 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.2E-24 4.2E-29 232.9 8.4 116 695-821 52-170 (239)
65 3jxi_A Vanilloid receptor-rela 99.9 1.9E-23 6.3E-28 224.5 16.6 116 704-830 84-232 (260)
66 3t8k_A Uncharacterized protein 99.9 3.5E-24 1.2E-28 222.8 7.5 108 695-808 57-177 (186)
67 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.2E-24 1.1E-28 229.6 6.0 191 537-806 4-200 (239)
68 2rfm_A Putative ankyrin repeat 99.9 1.3E-22 4.6E-27 208.5 15.8 144 656-830 31-174 (192)
69 2vge_A RELA-associated inhibit 99.9 8.2E-26 2.8E-30 241.9 -8.8 187 536-805 19-208 (229)
70 1bi7_B P16INK4A, MTS1, multipl 99.9 3.6E-23 1.2E-27 206.6 9.9 139 657-827 9-148 (156)
71 4hbd_A KN motif and ankyrin re 99.9 1.3E-22 4.4E-27 222.5 15.3 164 534-769 107-273 (276)
72 3v31_A Ankyrin repeat family A 99.9 2.9E-22 1E-26 201.1 15.9 140 659-829 2-141 (167)
73 2y1l_E Darpin-8.4; hydrolase-i 99.9 5.2E-22 1.8E-26 200.5 17.1 140 659-829 13-152 (169)
74 1d9s_A Cyclin-dependent kinase 99.9 7.6E-23 2.6E-27 199.6 10.3 126 657-809 9-135 (136)
75 2jab_A H10-2-G3; HER2, darpin, 99.9 5.1E-22 1.7E-26 193.7 14.5 125 658-808 12-136 (136)
76 1awc_B Protein (GA binding pro 99.9 9.6E-22 3.3E-26 195.0 15.6 123 695-829 17-139 (153)
77 3twr_A Tankyrase-2; ankyrin re 99.9 5.3E-22 1.8E-26 198.8 13.9 140 658-828 6-146 (165)
78 3f6q_A Integrin-linked protein 99.9 8.7E-22 3E-26 200.5 15.5 138 659-827 4-142 (179)
79 1ihb_A P18-INK4C(INK6), cyclin 99.9 6.5E-22 2.2E-26 196.9 13.6 124 695-829 20-143 (162)
80 3v30_A DNA-binding protein rfx 99.9 1.4E-21 4.7E-26 197.1 15.0 138 661-829 3-141 (172)
81 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.8E-21 6.2E-26 184.3 14.6 125 659-809 1-125 (126)
82 2vge_A RELA-associated inhibit 99.9 4.8E-22 1.6E-26 212.6 8.6 138 658-826 19-159 (229)
83 1bi7_B P16INK4A, MTS1, multipl 99.8 2.3E-21 7.9E-26 193.5 11.5 143 569-792 8-151 (156)
84 1bd8_A P19INK4D CDK4/6 inhibit 99.8 1.6E-20 5.4E-25 186.0 14.9 123 695-830 17-140 (156)
85 3c5r_A BARD-1, BRCA1-associate 99.8 9.2E-21 3.1E-25 184.5 12.4 123 703-837 1-124 (137)
86 3c5r_A BARD-1, BRCA1-associate 99.8 2.6E-21 9.1E-26 188.3 7.3 126 657-808 7-132 (137)
87 3ehr_A Osteoclast-stimulating 99.8 3.8E-21 1.3E-25 202.4 8.6 135 658-823 71-206 (222)
88 2jab_A H10-2-G3; HER2, darpin, 99.8 5.1E-20 1.8E-24 179.5 15.6 124 537-769 13-136 (136)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.8 7.2E-20 2.5E-24 173.2 15.5 77 695-771 50-126 (126)
90 1d9s_A Cyclin-dependent kinase 99.8 2.1E-20 7.2E-25 182.2 11.4 116 703-830 2-118 (136)
91 1n0q_A 3ANK, 3 ankyrin repeats 99.8 4.9E-20 1.7E-24 168.1 12.5 92 712-809 1-92 (93)
92 3aaa_C Myotrophin, protein V-1 99.8 2E-20 6.8E-25 179.0 10.2 117 658-800 5-121 (123)
93 2aja_A Ankyrin repeat family p 99.8 5E-22 1.7E-26 228.8 -2.4 214 539-808 93-342 (376)
94 3aaa_C Myotrophin, protein V-1 99.8 8.7E-20 3E-24 174.5 12.2 111 709-830 3-113 (123)
95 1dcq_A PYK2-associated protein 99.8 1E-18 3.5E-23 192.6 22.0 110 695-810 145-263 (278)
96 3deo_A Signal recognition part 99.8 8.5E-20 2.9E-24 187.1 10.8 111 659-796 43-154 (183)
97 3t8k_A Uncharacterized protein 99.8 2.8E-20 9.7E-25 193.3 6.7 138 660-830 6-161 (186)
98 2b0o_E UPLC1; arfgap, structur 99.8 1.2E-19 4E-24 202.5 11.4 92 695-798 208-299 (301)
99 2aja_A Ankyrin repeat family p 99.8 3.4E-21 1.2E-25 221.9 -1.9 184 538-820 65-255 (376)
100 2l6b_A NR1C; ankyrin, consensu 99.8 1.3E-19 4.5E-24 171.0 8.8 108 708-826 4-111 (115)
101 3ui2_A Signal recognition part 99.8 2.5E-19 8.6E-24 192.8 12.1 123 659-808 44-183 (244)
102 3lvq_E ARF-GAP with SH3 domain 99.8 5.4E-19 1.8E-23 210.0 14.0 110 695-810 147-265 (497)
103 3lvq_E ARF-GAP with SH3 domain 99.8 1.5E-18 5.2E-23 206.1 14.5 139 540-794 134-276 (497)
104 3jue_A Arfgap with coiled-coil 99.8 1.9E-18 6.5E-23 198.5 13.6 109 695-809 215-325 (368)
105 3ehr_A Osteoclast-stimulating 99.8 7.4E-19 2.5E-23 184.9 9.3 122 709-841 69-192 (222)
106 2b0o_E UPLC1; arfgap, structur 99.8 1.7E-18 5.7E-23 193.2 12.7 108 695-808 166-282 (301)
107 3deo_A Signal recognition part 99.7 2.2E-18 7.4E-23 176.6 10.7 111 709-831 40-151 (183)
108 3jue_A Arfgap with coiled-coil 99.7 7.2E-18 2.5E-22 193.7 14.6 150 537-796 198-348 (368)
109 3ui2_A Signal recognition part 99.7 1E-17 3.4E-22 180.3 11.6 110 710-831 42-152 (244)
110 1dcq_A PYK2-associated protein 99.7 3E-17 1E-21 180.9 15.2 131 538-772 130-264 (278)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.7 1.6E-17 5.5E-22 151.3 10.6 93 659-771 1-93 (93)
112 2zgd_A 3 repeat synthetic anky 99.7 2.3E-17 7.9E-22 155.6 10.7 93 706-804 17-109 (110)
113 2l6b_A NR1C; ankyrin, consensu 99.7 1.4E-17 4.8E-22 157.0 5.5 108 656-789 5-112 (115)
114 2zgd_A 3 repeat synthetic anky 99.5 1.7E-14 5.7E-19 135.9 9.8 89 657-765 21-109 (110)
115 2dfs_A Myosin-5A; myosin-V, in 99.5 2.1E-14 7.3E-19 183.9 10.7 144 867-1056 768-917 (1080)
116 2dfs_A Myosin-5A; myosin-V, in 99.4 1.9E-13 6.6E-18 175.1 12.1 125 918-1056 765-894 (1080)
117 2ix7_C Myosin-5A; contractIle 99.1 2.2E-10 7.6E-15 97.0 8.1 51 918-968 2-52 (58)
118 1n2d_C IQ2 and IQ3 motifs from 98.8 5.9E-09 2E-13 84.7 6.8 44 920-963 2-47 (48)
119 2cxk_A Camta1, calmodulin bind 98.6 2.7E-11 9.1E-16 112.8 -14.9 84 507-596 6-89 (95)
120 2ix7_C Myosin-5A; contractIle 98.6 1.1E-07 3.7E-12 80.4 8.0 49 942-1049 3-51 (58)
121 1n2d_C IQ2 and IQ3 motifs from 98.3 5.1E-07 1.7E-11 73.2 5.6 43 943-985 2-46 (48)
122 1wdc_A Scallop myosin; calcium 97.6 0.00014 4.7E-09 62.6 7.3 47 917-963 2-51 (64)
123 1kk8_A Myosin heavy chain, str 97.4 0.00011 3.8E-09 92.0 6.1 49 918-966 776-827 (837)
124 2bl0_A Major plasmodial myosin 97.4 0.00023 8E-09 61.0 5.8 45 919-963 2-49 (63)
125 2bl0_A Major plasmodial myosin 97.3 0.00048 1.6E-08 59.0 6.6 43 942-984 2-47 (63)
126 1wdc_A Scallop myosin; calcium 97.2 0.0006 2.1E-08 58.6 7.1 43 942-984 4-49 (64)
127 1i84_S Smooth muscle myosin he 97.2 0.001 3.5E-08 87.0 12.2 49 918-966 789-840 (1184)
128 1kk8_A Myosin heavy chain, str 96.6 0.0032 1.1E-07 79.1 8.4 46 939-984 774-822 (837)
129 1i84_S Smooth muscle myosin he 96.1 0.0093 3.2E-07 78.1 9.2 50 936-985 784-836 (1184)
130 3gn4_A Myosin-VI; unconvention 94.8 0.067 2.3E-06 53.1 8.0 32 944-975 45-76 (148)
131 4anj_A Unconventional myosin-V 94.8 0.033 1.1E-06 71.4 7.3 45 919-964 773-817 (1052)
132 1w7j_A Myosin VA; motor protei 89.1 0.29 1E-05 61.2 5.3 31 940-970 764-794 (795)
133 1w7j_A Myosin VA; motor protei 86.0 0.3 1E-05 61.0 2.8 31 917-947 764-794 (795)
134 4anj_A Unconventional myosin-V 85.6 0.7 2.4E-05 59.4 5.9 35 943-978 774-808 (1052)
135 2l53_B CAM, voltage-gated sodi 84.6 0.6 2E-05 34.3 2.7 20 920-939 5-24 (31)
136 2kxw_B Sodium channel protein 83.8 0.55 1.9E-05 33.4 2.1 18 921-938 6-23 (27)
137 2l53_B CAM, voltage-gated sodi 83.1 0.76 2.6E-05 33.7 2.7 18 945-962 7-24 (31)
138 2kxw_B Sodium channel protein 82.3 0.7 2.4E-05 32.9 2.2 17 945-961 7-23 (27)
139 3gn4_A Myosin-VI; unconvention 80.7 7.7 0.00026 38.5 9.8 22 1027-1048 46-67 (148)
140 2ycu_A Non muscle myosin 2C, a 59.6 6.1 0.00021 50.7 4.6 55 923-977 766-822 (995)
141 2d9z_A Protein kinase C, NU ty 50.9 7.6 0.00026 37.7 2.6 30 100-131 11-40 (129)
142 4dck_A Sodium channel protein 42.2 14 0.0005 37.4 3.2 23 920-942 129-151 (168)
143 4dck_A Sodium channel protein 33.0 28 0.00096 35.3 3.6 21 945-965 131-151 (168)
144 2ayd_A WRKY transcription fact 24.6 21 0.0007 31.6 0.7 8 70-77 15-22 (76)
145 1wj2_A Probable WRKY transcrip 24.0 20 0.00069 31.8 0.6 10 69-78 17-26 (78)
146 2f3y_B Voltage-dependent L-typ 23.2 47 0.0016 23.2 2.1 17 923-939 4-20 (26)
147 3dvk_B Voltage-dependent R-typ 23.1 31 0.0011 23.6 1.2 17 922-938 7-23 (23)
No 1
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.4e-33 Score=304.76 Aligned_cols=254 Identities=13% Similarity=0.013 Sum_probs=186.3
Q ss_pred CCcccChHHHHHHHcCCcHHHHHHHHCCCCCC-CCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCc
Q 001365 534 MSQQEAENCKWSCMFGEIEVPAEIVAGGVLRC-HTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDI 612 (1092)
Q Consensus 534 ~~~~~~TpLH~A~~fG~veVv~~LL~~Gadin-~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~T 612 (1092)
.+..+.||||+||..|+.+++++|++.|++.+ ....+..|.||||+||..|+ +..+++|+..|++++.+|..|.|
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~ga~~~~~~~~g~t 80 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGE----ASTVEKLYAAGAGVLVAERGGHT 80 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTC----HHHHHHHHHTTCCSSCCCTTSCC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCC----HHHHHHHHHcCCCCCCCCCCCCC
Confidence 45678999999999999999999999998833 23567789999999999986 55567899999999999999999
Q ss_pred HHhh----hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHH
Q 001365 613 TSEN----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLL 687 (1092)
Q Consensus 613 pL~~----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~ 687 (1092)
|||+ ++.+++++|+. ++........ . ...... ......+.++++.+...
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~------~~~~~~--~~~~~~~~~~~~~~~~~----------------- 134 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASD-T------YLTQSQ--DCTPDTSHAPAAVDSQP----------------- 134 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC----------------------------------------------------
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHH-H------Hhhccc--ccCcchhcchhhhcccc-----------------
Confidence 9995 77889988865 4443322110 0 000000 00001222333322221
Q ss_pred HhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCC-CccHHHHHHHcCCHHHHHHHH
Q 001365 688 KEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVN-GWTALHWAAYCGRERTVASLI 766 (1092)
Q Consensus 688 k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~-G~TpLH~Aa~~G~~eiV~~LL 766 (1092)
.....+...+...+++++.+|..|.||||+|+..|+.++|++|+++|++++.++.. |+||||+||..|+.++|++||
T Consensus 135 --~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 212 (282)
T 1oy3_D 135 --NPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLL 212 (282)
T ss_dssp -----------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred --ccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHH
Confidence 11112444556678899999999999999999999999999999999999999865 999999999999999999999
Q ss_pred HcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcHHHHh
Q 001365 767 ALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTG 830 (1092)
Q Consensus 767 e~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta~iaa 830 (1092)
++|++++. +|..|+||||+|+..|+.+++++|+++| ++++.+|..|.+|...+
T Consensus 213 ~~gad~~~------~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~tpl~~a 265 (282)
T 1oy3_D 213 KAGADPTA------RMYGGRTPLGSALLRPNPILARLLRAHG-----APEPEDGGDKLSPCSSS 265 (282)
T ss_dssp HTTCCTTC------CCTTSCCHHHHHHTSSCHHHHHHHHHTT-----CCCCCCC----------
T ss_pred HcCCCCcc------cccCCCCHHHHHHHcCCcHHHHHHHHcC-----CCcCcCCCccccccccc
Confidence 99999888 7899999999999999999999999999 78999999997764433
No 2
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-32 Score=295.34 Aligned_cols=236 Identities=15% Similarity=0.090 Sum_probs=194.5
Q ss_pred cccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHh
Q 001365 536 QQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE 615 (1092)
Q Consensus 536 ~~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~ 615 (1092)
..+.||||+||..|+.+++++|++.|++++ ..+..|.||||+||..|+ +..+++|+..|++++..|..|.||||
T Consensus 37 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g~~~~~~~~~g~t~L~ 110 (285)
T 1wdy_A 37 EGGWTPLHNAVQMSREDIVELLLRHGADPV--LRKKNGATPFLLAAIAGS----VKLLKLFLSKGADVNECDFYGFTAFM 110 (285)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTCCCHHHHHHHHTC----HHHHHHHHHTTCCTTCBCTTCCBHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCc--ccCCCCCCHHHHHHHcCC----HHHHHHHHHcCCCCCccCcccCCHHH
Confidence 346788888888888888888888888866 556668888888888875 44456788888888888888888888
Q ss_pred h----hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhh
Q 001365 616 N----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEK 690 (1092)
Q Consensus 616 ~----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~ 690 (1092)
. ++.+++++|.. +++++....... . ....+..|.++|+.++..+...
T Consensus 111 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~------~------~~~~~~~g~t~L~~A~~~~~~~---------------- 162 (285)
T 1wdy_A 111 EAAVYGKVKALKFLYKRGANVNLRRKTKE------D------QERLRKGGATALMDAAEKGHVE---------------- 162 (285)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCCCH------H------HHHTTCCCCCHHHHHHHHTCHH----------------
T ss_pred HHHHhCCHHHHHHHHHhCCCcccccccHH------H------HHhhccCCCcHHHHHHHcCCHH----------------
Confidence 5 66677777644 666554332100 0 0111367889999988766542
Q ss_pred hHHHHHHHHHhC-CCCCCcccCCCCcHHHHHHHcCC----HhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHH
Q 001365 691 LQVWLVQKAAEG-GKGPCVLDHCGQGVLHFAAALGY----DWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASL 765 (1092)
Q Consensus 691 l~~~LvklLle~-GadvN~~D~~G~TpLH~AA~~G~----~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~L 765 (1092)
+++.|++. |++++..|..|.||||+|+..|+ .+++++|+++|++++.+|..|+||||+|+..|+.++|++|
T Consensus 163 ----~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 238 (285)
T 1wdy_A 163 ----VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 238 (285)
T ss_dssp ----HHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ----HHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 67778876 99999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccC
Q 001365 766 IA-LGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNK 820 (1092)
Q Consensus 766 Le-~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD 820 (1092)
++ .|++++. +|..|.||||+|+..|+.+++++|+++| ++++++|
T Consensus 239 l~~~g~~~~~------~~~~g~t~l~~A~~~~~~~i~~~Ll~~G-----a~~~~~d 283 (285)
T 1wdy_A 239 LEQEHIEIND------TDSDGKTALLLAVELKLKKIAELLCKRG-----ASTDCGD 283 (285)
T ss_dssp HHSSSCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHS-----SCSCCSS
T ss_pred HhccCCCccc------cCCCCCcHHHHHHHcCcHHHHHHHHHcC-----CCCCccc
Confidence 99 8999887 7899999999999999999999999999 6677766
No 3
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.4e-33 Score=303.82 Aligned_cols=232 Identities=15% Similarity=0.065 Sum_probs=200.4
Q ss_pred ccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhh
Q 001365 537 QEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN 616 (1092)
Q Consensus 537 ~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~ 616 (1092)
.+.||||+||..|+.+++++|++.|++++ ..+..|.||||+||..|+ +..+++|++.|++++..|..|.||||.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 75 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVN--IITADHVSPLHEACLGGH----LSCVKILLKHGAQVNGVTADWHTPLFN 75 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSS--CCCTTCCCHHHHHHHHTC----HHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CcCCCCCCHHHHHHHcCC----HHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 36799999999999999999999999977 566779999999999986 445578999999999999999999995
Q ss_pred ----hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhh
Q 001365 617 ----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKL 691 (1092)
Q Consensus 617 ----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l 691 (1092)
++.+++++|+. |++++.. ..+.+|||.|+..+...
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~~~~-----------------------~~g~t~L~~A~~~~~~~----------------- 115 (261)
T 2xai_A 76 ACVSGSWDCVNLLLQHGASVQPE-----------------------SDLASPIHEAARRGHVE----------------- 115 (261)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCS-----------------------CTTCCHHHHHHHTTCHH-----------------
T ss_pred HHHcCCHHHHHHHHHCCCCCCCC-----------------------CCCCCHHHHHHHcCcHH-----------------
Confidence 67788888755 5555321 46889999998876542
Q ss_pred HHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCC
Q 001365 692 QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771 (1092)
Q Consensus 692 ~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAd 771 (1092)
+++.|++.|+++|..|..|.||||+|+..|+.++|++|+++|+++|. |..|+||||+|+..|+.++|++|+++|++
T Consensus 116 ---~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad 191 (261)
T 2xai_A 116 ---CVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGAD 191 (261)
T ss_dssp ---HHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred ---HHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCC
Confidence 78889999999999999999999999999999999999999999995 88999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC---cccCcccCCCCCcH
Q 001365 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSA---LSAISLNKKDGDVA 826 (1092)
Q Consensus 772 in~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h---~adlnlkD~~G~ta 826 (1092)
++. +|..|+||||+|+.++ +++++|++++..+. +++++++|..|.++
T Consensus 192 ~~~------~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~ 241 (261)
T 2xai_A 192 TQA------KNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQ 241 (261)
T ss_dssp TTC------CCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHHHHHHTTSCTTC
T ss_pred CCC------cCCCCCChhhhccccc--cHHHHHHhccCCccHHHHHHHHHHHHhchhc
Confidence 887 8899999999999665 59999999875443 35677888888664
No 4
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.3e-32 Score=294.06 Aligned_cols=252 Identities=17% Similarity=0.122 Sum_probs=216.4
Q ss_pred ccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhh
Q 001365 537 QEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN 616 (1092)
Q Consensus 537 ~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~ 616 (1092)
++.|+||+||..|+++++++|++.|++++.. .+..|.||||+||..|+ ...+++|++.|++++..|..|.||||.
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~~g~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 78 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQ-EEEGGWTPLHNAVQMSR----EDIVELLLRHGADPVLRKKNGATPFLL 78 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTTCCCHHHHHHHTTC----HHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcccc-cCCCCCcHHHHHHHcCC----HHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 4578999999999999999999999987743 25679999999999986 455578999999999999999999995
Q ss_pred ----hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhh
Q 001365 617 ----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKL 691 (1092)
Q Consensus 617 ----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l 691 (1092)
++.+++++|+. |++++.. +..|++||+.++..+...
T Consensus 79 A~~~~~~~~v~~Ll~~g~~~~~~----------------------~~~g~t~L~~A~~~~~~~----------------- 119 (285)
T 1wdy_A 79 AAIAGSVKLLKLFLSKGADVNEC----------------------DFYGFTAFMEAAVYGKVK----------------- 119 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCB----------------------CTTCCBHHHHHHHTTCHH-----------------
T ss_pred HHHcCCHHHHHHHHHcCCCCCcc----------------------CcccCCHHHHHHHhCCHH-----------------
Confidence 67788888754 6655432 357899999998876542
Q ss_pred HHHHHHHHHhCCCCCCcc----------cCCCCcHHHHHHHcCCHhHHHHHHHC-CCCccccCCCCccHHHHHHHcCC--
Q 001365 692 QVWLVQKAAEGGKGPCVL----------DHCGQGVLHFAAALGYDWALEPTTVA-GVNINFRDVNGWTALHWAAYCGR-- 758 (1092)
Q Consensus 692 ~~~LvklLle~GadvN~~----------D~~G~TpLH~AA~~G~~~iVk~LL~~-Gadin~~D~~G~TpLH~Aa~~G~-- 758 (1092)
++++|++.|++++.. +..|.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+
T Consensus 120 ---~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~ 196 (285)
T 1wdy_A 120 ---ALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDS 196 (285)
T ss_dssp ---HHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTT
T ss_pred ---HHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccc
Confidence 788899999999987 78899999999999999999999998 99999999999999999999999
Q ss_pred --HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHH-cCCCCCcccCcccCCCCCcHHHHh-h---
Q 001365 759 --ERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE-SDLSSALSAISLNKKDGDVAEVTG-A--- 831 (1092)
Q Consensus 759 --~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe-~Ga~~h~adlnlkD~~G~ta~iaa-~--- 831 (1092)
.+++++|+++|++++. +|..|.||||+|+..|+.+++++|++ .| ++++.+|..|.|+...+ .
T Consensus 197 ~~~~i~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g-----~~~~~~~~~g~t~l~~A~~~~~ 265 (285)
T 1wdy_A 197 DVEAITHLLLDHGADVNV------RGERGKTPLILAVEKKHLGLVQRLLEQEH-----IEINDTDSDGKTALLLAVELKL 265 (285)
T ss_dssp THHHHHHHHHHTTCCSSC------CCTTSCCHHHHHHHTTCHHHHHHHHHSSS-----CCTTCCCTTSCCHHHHHHHTTC
T ss_pred hHHHHHHHHHHcCCCCCC------cCCCCCcHHHHHHHcCCHHHHHHHHhccC-----CCccccCCCCCcHHHHHHHcCc
Confidence 9999999999999887 77899999999999999999999999 67 78999999997774433 2
Q ss_pred -hhhccccccCCCCCC
Q 001365 832 -TAVQTVPQRCPTPVS 846 (1092)
Q Consensus 832 -~~v~~l~~~~as~~s 846 (1092)
..++.|.+.++.+..
T Consensus 266 ~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 266 KKIAELLCKRGASTDC 281 (285)
T ss_dssp HHHHHHHHHHSSCSCC
T ss_pred HHHHHHHHHcCCCCCc
Confidence 455666666666553
No 5
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=6.9e-33 Score=298.43 Aligned_cols=222 Identities=16% Similarity=0.104 Sum_probs=167.7
Q ss_pred CCcccChHHHHHHHcC-------------CcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCC
Q 001365 534 MSQQEAENCKWSCMFG-------------EIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHI 600 (1092)
Q Consensus 534 ~~~~~~TpLH~A~~fG-------------~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~G 600 (1092)
.+..+.||||+||..| +.++++.|++.|++++. ..+..|.||||+||..|+ +..+++|++.|
T Consensus 6 ~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~-~~d~~g~t~L~~A~~~g~----~~~v~~Ll~~g 80 (253)
T 1yyh_A 6 RGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHN-QTDRTGETALHLAARYSR----SDAAKRLLEAS 80 (253)
T ss_dssp -----------------------------------------------CCCTTSCCHHHHHHHTTC----HHHHHHHHHTT
T ss_pred CCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCccc-ccCCCCCcHHHHHHHcCC----HHHHHHHHHcC
Confidence 4567899999999988 89999999999998652 346789999999999986 45557899999
Q ss_pred CCcccccCCCCcHHhh----hHHHHHHHHhc-CC-CCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCC
Q 001365 601 PDVDVADNCGDITSEN----LRMQFGKLLCL-TS-VSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFS 674 (1092)
Q Consensus 601 advna~D~~G~TpL~~----~~~~lvkLLl~-ga-dv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s 674 (1092)
++++..|..|.||||. ++.+++++|+. ++ +++.. +..|++|||.|+..+...
T Consensus 81 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~----------------------~~~g~t~L~~A~~~~~~~ 138 (253)
T 1yyh_A 81 ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDAR----------------------MHDGTTPLILAARLAVEG 138 (253)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCC----------------------CTTCCCHHHHHHHHTCSS
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccc----------------------CCCCCcHHHHHHHcChHH
Confidence 9999999999999995 66788888865 43 33222 357999999999887765
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHH
Q 001365 675 SEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAA 754 (1092)
Q Consensus 675 ~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa 754 (1092)
++++|++.|+++|.+|..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+
T Consensus 139 --------------------~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~ 198 (253)
T 1yyh_A 139 --------------------MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAA 198 (253)
T ss_dssp --------------------HHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred --------------------HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 788899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 001365 755 YCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 808 (1092)
Q Consensus 755 ~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 808 (1092)
..|+.++|++|+++|++++. +|..|+||||+|+.+|+.+|+++|....
T Consensus 199 ~~~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 199 REGSYETAKVLLDHFANRDI------TDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp HHTCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred HCCCHHHHHHHHHcCCCccc------cccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 99999999999999999887 7899999999999999999999999754
No 6
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3e-32 Score=315.36 Aligned_cols=291 Identities=13% Similarity=0.087 Sum_probs=191.2
Q ss_pred ccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhh
Q 001365 537 QEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN 616 (1092)
Q Consensus 537 ~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~ 616 (1092)
.+.||||+||..|+.+++++|++.|++++ ..+..|.||||+||..|+ +..+++|++.|++++..+..|.||||.
T Consensus 46 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~ga~~~~~~~~g~t~L~~ 119 (437)
T 1n11_A 46 KVETPLHMAARAGHTEVAKYLLQNKAKVN--AKAKDDQTPLHCAARIGH----TNMVKLLLENNANPNLATTAGHTPLHI 119 (437)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCSS--CCCTTSCCHHHHHHHHTC----HHHHHHHHHHTCCTTCCCTTCCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCC--CCCCCCCCHHHHHHHCCC----HHHHHHHHhCCCCCCCCCCCCCcHHHH
Confidence 45567777777777777777777777655 445557777777777764 333456677777777777777777764
Q ss_pred ----hHHHHHHHHhc-CCCCCCCCCCCCchhh--------HHHHHHHhh----hhccCCCcchHHHHhhhhcCCChHH--
Q 001365 617 ----LRMQFGKLLCL-TSVSTPNYDPSNLSDI--------SQLNSKISS----LLKDENDDWDLMLKLTAEEKFSSEE-- 677 (1092)
Q Consensus 617 ----~~~~lvkLLl~-gadv~~~~~~~~~~~~--------~~ll~~I~~----Ll~~d~~g~t~L~~a~~~~~~s~~~-- 677 (1092)
++.+++++|+. +++...... .+...+ .+++..+.. ....+..|.|||+.|+..+......
T Consensus 120 A~~~g~~~~v~~Ll~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 198 (437)
T 1n11_A 120 AAREGHVETVLALLEKEASQACMTK-KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLL 198 (437)
T ss_dssp HHHHTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCcCCCC-CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 55555555543 444332221 111111 111111111 1122456777777777655433211
Q ss_pred ------------HHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCC
Q 001365 678 ------------VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVN 745 (1092)
Q Consensus 678 ------------~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~ 745 (1092)
.....++.++..+..+ +++.|++.|+++|..+..|.||||+|+..|+.++|++|+++|++++.+|..
T Consensus 199 l~~g~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 277 (437)
T 1n11_A 199 LPRGGSPHSPAWNGYTPLHIAAKQNQVE-VARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKS 277 (437)
T ss_dssp GGGTCCSCCCCTTCCCHHHHHHHTTCHH-HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTT
T ss_pred HhCCCCCCCcCCCCCCHHHHHHHcCCHH-HHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCC
Confidence 0112355555544433 677788888888888888888888888888888888888888888888888
Q ss_pred CccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCc
Q 001365 746 GWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDV 825 (1092)
Q Consensus 746 G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~t 825 (1092)
|+||||+|+..|+.+++++|+++|++++. +|..|+||||+|+..|+.++|++|+++| ++++.+|..|.|
T Consensus 278 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----ad~n~~~~~g~t 346 (437)
T 1n11_A 278 GLTPLHLVAQEGHVPVADVLIKHGVMVDA------TTRMGYTPLHVASHYGNIKLVKFLLQHQ-----ADVNAKTKLGYS 346 (437)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTC------CCSSCCCHHHHHHHSSCSHHHHHHHHTT-----CCTTCCCTTSCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCccCCC------CCCCCCCHHHHHHHcCcHHHHHHHHhcC-----CCCCCCCCCCCC
Confidence 88888888888888888888888888776 6778888888888888888888888887 678888888866
Q ss_pred HHHH-hh----hhhccccccCCCCCC
Q 001365 826 AEVT-GA----TAVQTVPQRCPTPVS 846 (1092)
Q Consensus 826 a~ia-a~----~~v~~l~~~~as~~s 846 (1092)
+... .. ..++.|.+..+.+..
T Consensus 347 ~L~~A~~~g~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 347 PLHQAAQQGHTDIVTLLLKNGASPNE 372 (437)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHHHHHHCChHHHHHHHHHCcCCCCC
Confidence 6333 22 445556666655543
No 7
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.9e-32 Score=313.54 Aligned_cols=251 Identities=17% Similarity=0.128 Sum_probs=173.6
Q ss_pred cChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhh-
Q 001365 538 EAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN- 616 (1092)
Q Consensus 538 ~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~- 616 (1092)
+.||||+||..|+.++++.|++.|++.+ ..+..|.||||+||..|+ +..+++|+..|++++..+..|.||||.
T Consensus 113 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 186 (437)
T 1n11_A 113 GHTPLHIAAREGHVETVLALLEKEASQA--CMTKKGFTPLHVAAKYGK----VRVAELLLERDAHPNAAGKNGLTPLHVA 186 (437)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCSC--CCCTTSCCHHHHHHHTTC----HHHHHHHHHTTCCTTCCCSSCCCHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCc--CCCCCCCCHHHHHHHcCC----HHHHHHHHhCCCCCCCCCCCCCCHHHHH
Confidence 4455555555555555555555555433 233345555555555543 233344555555555555555555553
Q ss_pred ---hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHH--------------H
Q 001365 617 ---LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEE--------------V 678 (1092)
Q Consensus 617 ---~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~--------------~ 678 (1092)
++.+++++|+. +++++.. +..+++||+.++..+...... .
T Consensus 187 ~~~~~~~~v~~Ll~~g~~~~~~----------------------~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 244 (437)
T 1n11_A 187 VHHNNLDIVKLLLPRGGSPHSP----------------------AWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQ 244 (437)
T ss_dssp HHTTCHHHHHHHGGGTCCSCCC----------------------CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHcCCHHHHHHHHhCCCCCCCc----------------------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Confidence 34444444432 3333222 223445555554433322110 0
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCC
Q 001365 679 KEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (1092)
Q Consensus 679 ~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~ 758 (1092)
..+.|+.++..+..+ ++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+||..|+
T Consensus 245 g~t~L~~A~~~g~~~-~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~ 323 (437)
T 1n11_A 245 GVTPLHLAAQEGHAE-MVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGN 323 (437)
T ss_dssp CCCHHHHHHHTTCHH-HHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSC
T ss_pred CCCHHHHHHHCCCHH-HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCc
Confidence 012234444433332 7889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcHHH
Q 001365 759 ERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEV 828 (1092)
Q Consensus 759 ~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta~i 828 (1092)
.++|++|+++|+++|. +|..|+||||+|+..|+.++|++|+++| ++++.+|.+|.|+..
T Consensus 324 ~~~v~~Ll~~gad~n~------~~~~g~t~L~~A~~~g~~~iv~~Ll~~g-----a~~~~~~~~g~t~l~ 382 (437)
T 1n11_A 324 IKLVKFLLQHQADVNA------KTKLGYSPLHQAAQQGHTDIVTLLLKNG-----ASPNEVSSDGTTPLA 382 (437)
T ss_dssp SHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCSCCCCSSSCCHHH
T ss_pred HHHHHHHHhcCCCCCC------CCCCCCCHHHHHHHCChHHHHHHHHHCc-----CCCCCCCCCCCCHHH
Confidence 9999999999999887 7899999999999999999999999999 789999999977643
No 8
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=8.5e-33 Score=292.21 Aligned_cols=225 Identities=18% Similarity=0.092 Sum_probs=190.1
Q ss_pred CCcccChHHHHHHHcCCcHHHHHHHH----CCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCC
Q 001365 534 MSQQEAENCKWSCMFGEIEVPAEIVA----GGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNC 609 (1092)
Q Consensus 534 ~~~~~~TpLH~A~~fG~veVv~~LL~----~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~ 609 (1092)
.+..+.||||+||..|+++++++|++ .|++++ ..+..|.||||+||..|+ +..+++|++.|++++..|..
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~--~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g~~~~~~~~~ 78 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELD--IYNNLRQTPLHLAVITTL----PSVVRLLVTAGASPMALDRH 78 (241)
T ss_dssp --CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSC--CCCTTSCCHHHHHHHTTC----HHHHHHHHHTTCCTTCCCTT
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCC--cccccCCCHHHHHHHcCC----HHHHHHHHHcCCCccccCCC
Confidence 34568899999999999999999987 788876 567779999999999986 45557899999999999999
Q ss_pred CCcHHhh----hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHH
Q 001365 610 GDITSEN----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQ 684 (1092)
Q Consensus 610 G~TpL~~----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~ 684 (1092)
|.||||. ++.+++++|+. ++..... +...+..|++||+.++..+...
T Consensus 79 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~------------------~~~~~~~g~t~L~~A~~~~~~~---------- 130 (241)
T 1k1a_A 79 GQTAAHLACEHRSPTCLRALLDSAAPGTLD------------------LEARNYDGLTALHVAVNTECQE---------- 130 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCTTSCC------------------TTCCCTTSCCHHHHHHHHTCHH----------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCcccc------------------ccccCcCCCcHHHHHHHcCCHH----------
Confidence 9999995 66788877754 4421100 0112367899999988766532
Q ss_pred HHHHhhhHHHHHHHHHhCCCCCCccc-CCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHH
Q 001365 685 KLLKEKLQVWLVQKAAEGGKGPCVLD-HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVA 763 (1092)
Q Consensus 685 ~a~k~~l~~~LvklLle~GadvN~~D-~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~ 763 (1092)
++++|++.|++++..+ ..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|+
T Consensus 131 ----------~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 200 (241)
T 1k1a_A 131 ----------TVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVR 200 (241)
T ss_dssp ----------HHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHH
T ss_pred ----------HHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 7888999999999999 88999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 001365 764 SLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 808 (1092)
Q Consensus 764 ~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 808 (1092)
+|+++|++++. +|..|.||||+|+..|+.++++.|++.+
T Consensus 201 ~Ll~~ga~~~~------~~~~g~tpl~~A~~~~~~~i~~~l~~~~ 239 (241)
T 1k1a_A 201 TLVRSGADSSL------KNCHNDTPLMVARSRRVIDILRGKATRP 239 (241)
T ss_dssp HHHHTTCCTTC------CCTTSCCTTTTCSSHHHHHHHTC-----
T ss_pred HHHhcCCCCCC------cCCCCCCHHHHHHhcCcHHHHhhhccCC
Confidence 99999999887 7899999999999999999999999876
No 9
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=5.3e-32 Score=300.62 Aligned_cols=260 Identities=20% Similarity=0.090 Sum_probs=205.2
Q ss_pred CcccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHH
Q 001365 535 SQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITS 614 (1092)
Q Consensus 535 ~~~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL 614 (1092)
+..+.||||+||..|+.+++++|++.|++++ ..+..|.||||+||..|+ +..+++|++.|++++..|..|.|||
T Consensus 55 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~g~----~~iv~~Ll~~g~~~~~~~~~g~t~L 128 (351)
T 3utm_A 55 DGRKSTPLHLAAGYNRVRIVQLLLQHGADVH--AKDKGGLVPLHNACSYGH----YEVTELLLKHGACVNAMDLWQFTPL 128 (351)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTCCCHHHHHHHTTC----HHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC--ccCCCCCcHHHHHHHCCC----HHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 4557899999999999999999999999977 566779999999999986 4555789999999999999999999
Q ss_pred hh----hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChH--HHHHHHHHHHH
Q 001365 615 EN----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSE--EVKEKLVQKLL 687 (1092)
Q Consensus 615 ~~----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~--~~~~~lL~~a~ 687 (1092)
|+ ++.+++++|+. |++.+... ..+.++++.+...+..... ......+..++
T Consensus 129 ~~A~~~~~~~~v~~Ll~~g~~~~~~~----------------------~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~ 186 (351)
T 3utm_A 129 HEAASKNRVEVCSLLLSHGADPTLVN----------------------CHGKSAVDMAPTPELRERLTYEFKGHSLLQAA 186 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCC----------------------TTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcccc----------------------CCCCcchHHHhhhhhHHHHHhhhcccHHHHHH
Confidence 95 67788888754 66655433 3555666655432211110 01111222333
Q ss_pred HhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHc---CCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHH
Q 001365 688 KEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAAL---GYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVAS 764 (1092)
Q Consensus 688 k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~---G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~ 764 (1092)
...... .+..++..+......+..|.||||+|+.. +..+++++|+++|+++|.+|..|+||||+||..|+.++|++
T Consensus 187 ~~~~~~-~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 265 (351)
T 3utm_A 187 READLA-KVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEV 265 (351)
T ss_dssp HTTCHH-HHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HhccHH-HHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 333333 34445555555555788999999999999 55899999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcHHHHhhhhh
Q 001365 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGATAV 834 (1092)
Q Consensus 765 LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta~iaa~~~v 834 (1092)
|+++|+++|. +|..|+||||+|+..|+.+++++|+++| ++++++|..|.|+...+...+
T Consensus 266 Ll~~ga~~n~------~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-----ad~~~~~~~g~tal~~a~~~~ 324 (351)
T 3utm_A 266 LHKHGAKMNA------LDSLGQTALHRAALAGHLQTCRLLLSYG-----SDPSIISLQGFTAAQMGNEAV 324 (351)
T ss_dssp HHHTTCCTTC------CCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHSCHHH
T ss_pred HHHCCCCCCC------cCCCCCCHHHHHHHcCcHHHHHHHHHcC-----CCCCCcCCCCCChhhhhhHHH
Confidence 9999999888 7899999999999999999999999999 789999999977755444333
No 10
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2e-32 Score=301.38 Aligned_cols=216 Identities=14% Similarity=0.052 Sum_probs=180.5
Q ss_pred CCcccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcH
Q 001365 534 MSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDIT 613 (1092)
Q Consensus 534 ~~~~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~Tp 613 (1092)
.+..+.||||+||..|+.+++++|++.|++++ ..+..|.||||+||..|+ +..+++|++.|++++..|..|.||
T Consensus 55 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~ga~~~~~~~~g~t~ 128 (285)
T 3d9h_A 55 DAVSDWSPMHEAAIHGHQLSLRNLISQGWAVN--IITADHVSPLHEACLGGH----LSCVKILLKHGAQVNGVTADWHTP 128 (285)
T ss_dssp SSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSC--EECTTCCCHHHHHHHTTC----HHHHHHHHHTTCCSSCCCTTCCCH
T ss_pred CCccCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CcCCCCCCHHHHHHHCCc----HHHHHHHHHCCCCCCCCCCCCCCH
Confidence 45567899999999999999999999998876 556679999999999885 445578899999999999999999
Q ss_pred Hhh----hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHH
Q 001365 614 SEN----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLK 688 (1092)
Q Consensus 614 L~~----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k 688 (1092)
||. ++.+++++|+. +++++.. ..|+|||+.|+..+...
T Consensus 129 L~~A~~~~~~~~v~~Ll~~g~~~~~~-----------------------~~g~t~L~~A~~~g~~~-------------- 171 (285)
T 3d9h_A 129 LFNACVSGSWDCVNLLLQHGASVQPE-----------------------SDLASPIHEAARRGHVE-------------- 171 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSCS-----------------------CTTSCHHHHHHHHTCHH--------------
T ss_pred HHHHHHcCHHHHHHHHHHCCCCCCCC-----------------------CCCCCHHHHHHHcCCHH--------------
Confidence 985 66777777754 5544321 35788888888766542
Q ss_pred hhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHc
Q 001365 689 EKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIAL 768 (1092)
Q Consensus 689 ~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~ 768 (1092)
++++|++.|++++.+|..|.||||+|+..|+.++|++|+++|++++. |..|+||||+|+..|+.++|++|+++
T Consensus 172 ------~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~ 244 (285)
T 3d9h_A 172 ------CVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDF 244 (285)
T ss_dssp ------HHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHT
T ss_pred ------HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 77888889999999999999999999999999999999999999984 88899999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHc
Q 001365 769 GAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAES 807 (1092)
Q Consensus 769 GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~ 807 (1092)
|++++. +|..|+||||+|+ ++.+++++|+++
T Consensus 245 gad~~~------~d~~g~t~l~~A~--~~~~~~~~Ll~~ 275 (285)
T 3d9h_A 245 GADTQA------KNAEGKRPVELVP--PESPLAQLFLER 275 (285)
T ss_dssp TCCTTC------CCTTSCCGGGGSC--TTSHHHHHHHHH
T ss_pred CCCCCC------cCCCCCCHHHHhc--CccHHHHHHHHh
Confidence 998877 7789999999998 456889999987
No 11
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.2e-31 Score=283.49 Aligned_cols=219 Identities=19% Similarity=0.146 Sum_probs=192.9
Q ss_pred CCcccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcH
Q 001365 534 MSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDIT 613 (1092)
Q Consensus 534 ~~~~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~Tp 613 (1092)
.+..+.||||+||..|+.+++++|++.|++++ ..+..|.||||+||.+|+ +..+++|++.|++++..+..|.||
T Consensus 7 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g~~~~~~~~~g~t~ 80 (237)
T 3b7b_A 7 EHQNKRSPLHAAAEAGHVDICHMLVQAGANID--TCSEDQRTPLMEAAENNH----LEAVKYLIKAGALVDPKDAEGSTC 80 (237)
T ss_dssp SSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTT--CCCTTCCCHHHHHHHTTC----HHHHHHHHTTTCCCCCCCTTSCCH
T ss_pred ccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcC--ccCCCCCCHHHHHHHhCC----HHHHHHHHhCCCCCCCCCCCCCcH
Confidence 45668899999999999999999999999977 556679999999999986 555678999999999999999999
Q ss_pred Hhh----hHHHHHHHHhcCC--CCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHH
Q 001365 614 SEN----LRMQFGKLLCLTS--VSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLL 687 (1092)
Q Consensus 614 L~~----~~~~lvkLLl~ga--dv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~ 687 (1092)
||. ++.+++++|+... +++.. +..|++||+.++..+...
T Consensus 81 L~~A~~~~~~~~~~~Ll~~~~~~~~~~----------------------~~~g~t~L~~A~~~~~~~------------- 125 (237)
T 3b7b_A 81 LHLAAKKGHYEVVQYLLSNGQMDVNCQ----------------------DDGGWTPMIWATEYKHVD------------- 125 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCCTTCC----------------------CTTSCCHHHHHHHTTCHH-------------
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCcccC----------------------CCCCCCHHHHHHHcCCHH-------------
Confidence 995 6778888886633 33222 257899999998766542
Q ss_pred HhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHH
Q 001365 688 KEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIA 767 (1092)
Q Consensus 688 k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe 767 (1092)
++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++|++
T Consensus 126 -------~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 198 (237)
T 3b7b_A 126 -------LVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLS 198 (237)
T ss_dssp -------HHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHT
T ss_pred -------HHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHH
Confidence 7888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHH
Q 001365 768 LGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE 806 (1092)
Q Consensus 768 ~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe 806 (1092)
+|++++. +|..|.||||+|+.+|+...+..|++
T Consensus 199 ~gad~~~------~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 199 RDSDVTL------KNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp TTCCTTC------CCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred cCCCCCc------cCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999887 78999999999999999876666654
No 12
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2e-31 Score=298.25 Aligned_cols=243 Identities=14% Similarity=0.062 Sum_probs=156.3
Q ss_pred cChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCC-----------------
Q 001365 538 EAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHI----------------- 600 (1092)
Q Consensus 538 ~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~G----------------- 600 (1092)
+.|+||.||..|++++|++||+.|+++|.... ..|+||||+||.+|+ .+++ ++|+++|
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~-~~g~TpLh~A~~~g~--~~iv--~~Ll~~ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEE-EGGWTPLHNAVQMSR--EDIV--ELLLRHGADPVLRKKNGATPFILA 99 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TTCCCHHHHHHHTTC--HHHH--HHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCccCC-CCCcCHHHHHHHcCC--HHHH--HHHHHcCCchhhhccCCCchhHHH
Confidence 45666666666666666666666666665332 236666666666664 3333 4555554
Q ss_pred ----------------CCcccccCCCCcHHhh----hHHHHHHHH-hcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCC
Q 001365 601 ----------------PDVDVADNCGDITSEN----LRMQFGKLL-CLTSVSTPNYDPSNLSDISQLNSKISSLLKDEND 659 (1092)
Q Consensus 601 ----------------advna~D~~G~TpL~~----~~~~lvkLL-l~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~ 659 (1092)
++++..|..|.||+|. ++.+++++| ..|++++......... ...+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~------------~~~~~~ 167 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQ------------ERLRKG 167 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----------------CTTC
T ss_pred HhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhcccccc------------ccccCC
Confidence 4567889999999985 666777776 4577776543311110 011246
Q ss_pred cchHHHHhhhhcCCChHHHH----------------HHHHHHHHH--hhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHH
Q 001365 660 DWDLMLKLTAEEKFSSEEVK----------------EKLVQKLLK--EKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAA 721 (1092)
Q Consensus 660 g~t~L~~a~~~~~~s~~~~~----------------~~lL~~a~k--~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA 721 (1092)
|+||||.|+..++......- ..+++.+.. ....+.++++|+++|+++|.+|..|+||||+||
T Consensus 168 g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~ 247 (337)
T 4g8k_A 168 GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAV 247 (337)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 67777777666554321100 001111111 111233667777888888888888888888888
Q ss_pred HcCCHhHHHHHHHC-CCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHH
Q 001365 722 ALGYDWALEPTTVA-GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGI 800 (1092)
Q Consensus 722 ~~G~~~iVk~LL~~-Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~ei 800 (1092)
..|+.++|+.|+.. |+++|.+|..|+||||+||..|+.++|++||++||++|. .||||+|+.+|+.++
T Consensus 248 ~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~-----------~~~L~~A~~~~~~~i 316 (337)
T 4g8k_A 248 EKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC-----------GDLVMTARRNYDHSL 316 (337)
T ss_dssp HTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT-----------CCHHHHHHHTTCHHH
T ss_pred HhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----------CCHHHHHHHcCCHHH
Confidence 88888888877764 778888888888888888888888888888888877654 358888888888888
Q ss_pred HHHHHHcC
Q 001365 801 AGYLAESD 808 (1092)
Q Consensus 801 v~~LLe~G 808 (1092)
|++||++|
T Consensus 317 v~~Ll~~G 324 (337)
T 4g8k_A 317 VKVLLSHG 324 (337)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHCc
Confidence 88888877
No 13
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2.5e-31 Score=297.45 Aligned_cols=232 Identities=15% Similarity=0.046 Sum_probs=159.0
Q ss_pred CCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccC-CCCcHHhh----hHHHHHHHHh-cCCCCCCCCCCCCchhhHH
Q 001365 572 VGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADN-CGDITSEN----LRMQFGKLLC-LTSVSTPNYDPSNLSDISQ 645 (1092)
Q Consensus 572 ~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~-~G~TpL~~----~~~~lvkLLl-~gadv~~~~~~~~~~~~~~ 645 (1092)
.|.||||.||.+|+ +..+++|++.|+++|.++. .|.||||+ ++.+++++|+ .|++++.............
T Consensus 24 ~~~t~L~~Av~~g~----~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 24 EDNHLLIKAVQNED----VDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILA 99 (337)
T ss_dssp HHHHHHHHHHHTTC----HHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CCChHHHHHHHcCC----HHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHH
Confidence 48899999999986 5556789999999999875 59999995 7889998885 4787776554222111111
Q ss_pred H-------HH----HHhhhhccCCCcchHHHHhhhhcCCChHHH------------------------HHHHHHHHHHhh
Q 001365 646 L-------NS----KISSLLKDENDDWDLMLKLTAEEKFSSEEV------------------------KEKLVQKLLKEK 690 (1092)
Q Consensus 646 l-------l~----~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~------------------------~~~lL~~a~k~~ 690 (1092)
. .. ....+...+..|+|||+.++..+....... ..+.|+.++..+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g 179 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 179 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHT
T ss_pred HhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCC
Confidence 0 01 111222346789999999987665432111 012456665555
Q ss_pred hHHHHHHHHH-hCCCCCCcccCCCCcHHHHHHHcCC----HhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHH
Q 001365 691 LQVWLVQKAA-EGGKGPCVLDHCGQGVLHFAAALGY----DWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASL 765 (1092)
Q Consensus 691 l~~~LvklLl-e~GadvN~~D~~G~TpLH~AA~~G~----~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~L 765 (1092)
..+ ++++|+ +.|+++|.+|..|.|+||+++..+. ..++++|+++|+++|.+|..|+||||+||..|+.++|++|
T Consensus 180 ~~~-~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~L 258 (337)
T 4g8k_A 180 HVE-VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 258 (337)
T ss_dssp CHH-HHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHH
T ss_pred CHH-HHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHH
Confidence 444 566666 3577777777777787777766543 3467777777888877777788888888888888887777
Q ss_pred HHc-CCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCccc
Q 001365 766 IAL-GAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLN 819 (1092)
Q Consensus 766 Le~-GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlk 819 (1092)
++. |+++|. +|..|+||||+|+..|+.++|++|+++| ++++.+
T Consensus 259 l~~~~~~vn~------~d~~G~TpL~~A~~~g~~~iv~~Ll~~G-----Ad~n~~ 302 (337)
T 4g8k_A 259 LEQEHIEIND------TDSDGKTALLLAVELKLKKIAELLCKRG-----ASTDCG 302 (337)
T ss_dssp HTSTTCCTTC------BCTTSCBHHHHHHHTTCHHHHHHHHTTS-----CSSTTC
T ss_pred HHhcCCcccC------cCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCC
Confidence 764 677666 6677788888888888888888888777 455544
No 14
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.4e-33 Score=304.88 Aligned_cols=223 Identities=17% Similarity=0.075 Sum_probs=156.7
Q ss_pred CcccChHHHHHHHcCCcHHHHHHHHCCCCCC------CCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccC
Q 001365 535 SQQEAENCKWSCMFGEIEVPAEIVAGGVLRC------HTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADN 608 (1092)
Q Consensus 535 ~~~~~TpLH~A~~fG~veVv~~LL~~Gadin------~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~ 608 (1092)
++.+.++|+.||..|++++|++||+.|++.. ....+..|.||||+|+..+. . ...+++|+..|+++|.+|.
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~--~-~~~v~~Ll~~Gadvn~~d~ 84 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAP--A-QKRLAKVPASGLGVNVTSQ 84 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC-------------------------------------------CCCCTTCCCT
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCC--H-HHHHHHHHHCCCCCCCcCC
Confidence 4567899999999999999999999987532 22346679999999997763 1 2234688999999999999
Q ss_pred CCCcHHhh----hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHH
Q 001365 609 CGDITSEN----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLV 683 (1092)
Q Consensus 609 ~G~TpL~~----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL 683 (1092)
+|.||||+ ++.+++++|+. +++++... ..|.+|++.++..+...
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~----------------------~~g~t~l~~a~~~~~~~--------- 133 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGANAGARN----------------------ADQAVPLHLACQQGHFQ--------- 133 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCC----------------------TTCCCHHHHHHHHTCHH---------
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCcCccC----------------------CCCCCccccccccChHH---------
Confidence 99999995 66677777754 66554432 57888998887755432
Q ss_pred HHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHH
Q 001365 684 QKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVA 763 (1092)
Q Consensus 684 ~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~ 763 (1092)
++++|++.|+++|.+|..|+||||+||..|+.++|++||++|+++|.+|..|+||||+||..|+.++|+
T Consensus 134 -----------~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~ 202 (269)
T 4b93_B 134 -----------VVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVE 202 (269)
T ss_dssp -----------HHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred -----------HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHH
Confidence 677888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCc-HHHHHHHHHcC
Q 001365 764 SLIALGAAPGALSDPTPKYPSGRTPADLASSIGH-KGIAGYLAESD 808 (1092)
Q Consensus 764 ~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~-~eiv~~LLe~G 808 (1092)
+||++||++++ +|..|+||||+|+.+|+ .+++++|...+
T Consensus 203 ~Ll~~Gad~~~------~d~~G~TpL~~A~~~~~i~~lL~~l~~~~ 242 (269)
T 4b93_B 203 LLLLHGASVQV------LNKRQRTAVDCAEQNSKIMELLQVVPSCV 242 (269)
T ss_dssp HHHHTTCCSCC------CCTTSCCSGGGSCTTCHHHHHTTC-----
T ss_pred HHHHCCCCCCC------cCCCCCCHHHHHHhCCcHHHHHHHHHHhc
Confidence 99999998887 77899999999988776 34444444443
No 15
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.98 E-value=1.2e-32 Score=311.45 Aligned_cols=237 Identities=12% Similarity=0.112 Sum_probs=194.7
Q ss_pred CCcccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcH
Q 001365 534 MSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDIT 613 (1092)
Q Consensus 534 ~~~~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~Tp 613 (1092)
.+..+.||||+||..|+++++++||+.|++++ ..+..|.||||+||.+|+ +..+++|+..|++++. ..|.||
T Consensus 16 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~--~~d~~g~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~--~~g~t~ 87 (364)
T 3ljn_A 16 SDDENMEKIHVAARKGQTDEVRRLIETGVSPT--IQNRFGCTALHLACKFGC----VDTAKYLASVGEVHSL--WHGQKP 87 (364)
T ss_dssp CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTT--CCCTTCCCHHHHHHHHCC----HHHHHHHHHHCCCCCC--BTTBCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc--ccCCCCCcHHHHHHHcCC----HHHHHHHHHCCCCccc--cCCCCH
Confidence 45667999999999999999999999999977 567779999999999986 4455789999996655 579999
Q ss_pred Hhh----hHHHHHHHHhc-----CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhc--CCChHHHHHHH
Q 001365 614 SEN----LRMQFGKLLCL-----TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEE--KFSSEEVKEKL 682 (1092)
Q Consensus 614 L~~----~~~~lvkLLl~-----gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~--~~s~~~~~~~l 682 (1092)
||. ++.+++++|+. +++.+............ . ......+..|+||||.|+..+ ...
T Consensus 88 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~g~t~L~~A~~~g~~~~~-------- 154 (364)
T 3ljn_A 88 IHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVN----E-IGSHVKHCKGQTALHWCVGLGPEYLE-------- 154 (364)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEE----E-ETTEEEEESCCCHHHHHHHSCGGGHH--------
T ss_pred HHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhh----h-hccccCCCCCCCHHHHHHHcCCchHH--------
Confidence 995 77888888865 33221100000000000 0 000113467899999998866 322
Q ss_pred HHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCC-----ccccCCCCccHHHHHHHcC
Q 001365 683 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN-----INFRDVNGWTALHWAAYCG 757 (1092)
Q Consensus 683 L~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gad-----in~~D~~G~TpLH~Aa~~G 757 (1092)
++++|+++|+++|.+|..|.||||+||..|+.++|++|+++|++ +|.+|..|+||||+||..|
T Consensus 155 ------------~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g 222 (364)
T 3ljn_A 155 ------------MIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILIN 222 (364)
T ss_dssp ------------HHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTT
T ss_pred ------------HHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcC
Confidence 78899999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 001365 758 RERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDL 809 (1092)
Q Consensus 758 ~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga 809 (1092)
+.++|++||++|+++|. +|..|+||||+|+..|+.+++++|+++|+
T Consensus 223 ~~~~v~~Ll~~gad~~~------~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 268 (364)
T 3ljn_A 223 WEDVAMRFVEMGIDVNM------EDNEHTVPLYLSVRAAMVLLTKELLQKTD 268 (364)
T ss_dssp CHHHHHHHHTTTCCTTC------CCTTSCCHHHHHHHTCCHHHHHHHHHHSC
T ss_pred CHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHhChHHHHHHHHHcCC
Confidence 99999999999999887 78999999999999999999999999983
No 16
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.98 E-value=1.4e-31 Score=281.93 Aligned_cols=218 Identities=17% Similarity=0.101 Sum_probs=192.9
Q ss_pred cChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhh-
Q 001365 538 EAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN- 616 (1092)
Q Consensus 538 ~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~- 616 (1092)
..+|||+||..|++++++.|+..+... ....+..|.||||+||..|+ +..+++|++.|++++..|..|.||||.
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~-~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 80 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSL-ATRTDQDSRTALHWACSAGH----TEIVEFLLQLGVPVNDKDDAGWSPLHIA 80 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGG-GGCCCTTSCCHHHHHHHHTC----HHHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhh-hhcCCCCCCCHHHHHHHcCc----HHHHHHHHHhCCCCCCcCCCCCCHHHHH
Confidence 467999999999999999999887542 23557789999999999986 555578999999999999999999995
Q ss_pred ---hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhH
Q 001365 617 ---LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQ 692 (1092)
Q Consensus 617 ---~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~ 692 (1092)
++.+++++|+. +++++.. +..|.+||+.++..+...
T Consensus 81 ~~~~~~~~v~~Ll~~g~~~~~~----------------------~~~g~t~L~~A~~~~~~~------------------ 120 (231)
T 3aji_A 81 ASAGXDEIVKALLVKGAHVNAV----------------------NQNGCTPLHYAASKNRHE------------------ 120 (231)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCC----------------------CTTSCCHHHHHHHTTCHH------------------
T ss_pred HHcCHHHHHHHHHHcCCCCCCC----------------------CCCCCCHHHHHHHcCCHH------------------
Confidence 67788887754 6655433 257899999998766542
Q ss_pred HHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCC
Q 001365 693 VWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP 772 (1092)
Q Consensus 693 ~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdi 772 (1092)
++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++|+++|+++
T Consensus 121 --~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 198 (231)
T 3aji_A 121 --IAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASI 198 (231)
T ss_dssp --HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred --HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
Confidence 778899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 001365 773 GALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 808 (1092)
Q Consensus 773 n~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 808 (1092)
+. +|..|.||||+|+..++.+++++|+++|
T Consensus 199 ~~------~~~~g~t~l~~A~~~~~~~i~~lL~~~~ 228 (231)
T 3aji_A 199 YI------ENKEEKTPLQVAKGGLGLILKRLAEGEE 228 (231)
T ss_dssp CC------CCTTSCCHHHHSCHHHHHHHHHHHHHHH
T ss_pred CC------CCCCCCCHHHHHHhhHHHHHHHHHcccc
Confidence 87 7899999999999999999999999987
No 17
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.98 E-value=2.3e-31 Score=292.89 Aligned_cols=234 Identities=12% Similarity=-0.001 Sum_probs=178.8
Q ss_pred cccChHHHHHHHcCCcHHHHHHHHCCCC---------CCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccc
Q 001365 536 QQEAENCKWSCMFGEIEVPAEIVAGGVL---------RCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVA 606 (1092)
Q Consensus 536 ~~~~TpLH~A~~fG~veVv~~LL~~Gad---------in~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~ 606 (1092)
+.+.|+||+||+.|+.+.+..++..+.. -.....+..|+||||+||..|+ +..+++|+..|++++.+
T Consensus 13 ~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~----~~~v~~Ll~~g~~~~~~ 88 (285)
T 3d9h_A 13 GLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGH----QLSLRNLISQGWAVNII 88 (285)
T ss_dssp -----------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTC----HHHHHHHHHTTCCSCEE
T ss_pred hHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCC----HHHHHHHHHCCCCCCCc
Confidence 4578999999999998777776554311 1122457789999999999986 55567899999999999
Q ss_pred cCCCCcHHhh----hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHH
Q 001365 607 DNCGDITSEN----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEK 681 (1092)
Q Consensus 607 D~~G~TpL~~----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~ 681 (1092)
|..|.||||+ ++.+++++|+. |++++.. +..|+|||+.|+..+...
T Consensus 89 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~----------------------~~~g~t~L~~A~~~~~~~------- 139 (285)
T 3d9h_A 89 TADHVSPLHEACLGGHLSCVKILLKHGAQVNGV----------------------TADWHTPLFNACVSGSWD------- 139 (285)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCC----------------------CTTCCCHHHHHHHHTCHH-------
T ss_pred CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCC----------------------CCCCCCHHHHHHHcCHHH-------
Confidence 9999999995 77788888754 6665443 257899999998866542
Q ss_pred HHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHH
Q 001365 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERT 761 (1092)
Q Consensus 682 lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~ei 761 (1092)
++++|++.|++++..+ .|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++
T Consensus 140 -------------~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~ 205 (285)
T 3d9h_A 140 -------------CVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRAC 205 (285)
T ss_dssp -------------HHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHH
T ss_pred -------------HHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 7888999999998654 59999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcHHH
Q 001365 762 VASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEV 828 (1092)
Q Consensus 762 V~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta~i 828 (1092)
|++|+++|++++. |..|.||||+|+..|+.+++++|+++| ++++.+|..|.|+..
T Consensus 206 v~~Ll~~ga~~~~-------~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----ad~~~~d~~g~t~l~ 260 (285)
T 3d9h_A 206 VKKLLESGADVNQ-------GKGQDSPLHAVVRTASEELACLLMDFG-----ADTQAKNAEGKRPVE 260 (285)
T ss_dssp HHHHHHTTCCTTC-------CBTTBCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCGGG
T ss_pred HHHHHHCCCCCCC-------CCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCCCCCHHH
Confidence 9999999999873 578999999999999999999999998 789999999977643
No 18
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=1.3e-31 Score=306.05 Aligned_cols=223 Identities=17% Similarity=0.127 Sum_probs=193.7
Q ss_pred cccChHHHHHHHcCCcHHHHHHH--------HCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCccccc
Q 001365 536 QQEAENCKWSCMFGEIEVPAEIV--------AGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVAD 607 (1092)
Q Consensus 536 ~~~~TpLH~A~~fG~veVv~~LL--------~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D 607 (1092)
..+.||||+||..|+.++++.|+ +.|++++ ..+..|.||||+||.+|+ +..+++|+..|++++..|
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn--~~d~~g~TpL~~A~~~g~----~~iv~~Ll~~ga~~~~~~ 196 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVN--AMDCDENTPLMLAVLARR----RRLVAYLMKAGADPTIYN 196 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTT--CCCTTSCCHHHHHHHHTC----HHHHHHHHHTTCCSCCCC
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCc--CCCCCCCCHHHHHHHcCh----HHHHHHHHHCCCCCcccC
Confidence 46789999999999998888776 8999987 567779999999999986 455578999999999999
Q ss_pred CCCCcHHhh----hHHHHHHHHhcC----CCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHH
Q 001365 608 NCGDITSEN----LRMQFGKLLCLT----SVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVK 679 (1092)
Q Consensus 608 ~~G~TpL~~----~~~~lvkLLl~g----adv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~ 679 (1092)
..|.||||. ++.+++++|+.. ++++. .+..|+|+||.++..+....
T Consensus 197 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~----------------------~d~~g~t~L~~A~~~~~~~~---- 250 (373)
T 2fo1_E 197 KSERSALHQAAANRDFGMMVYMLNSTKLKGDIEE----------------------LDRNGMTALMIVAHNEGRDQ---- 250 (373)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSC----------------------CCTTSCCHHHHHHHSCSTTH----
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHhcCccccChhh----------------------cCCCCCCHHHHHHHhCCcch----
Confidence 999999995 677888888653 23332 23689999999887654221
Q ss_pred HHHHHHHHHhhhHHHHHHHHHhCCCCCCc--------ccCCCCcHHHHHHHcCCHhHHHHHHHCC-CCccccCCCCccHH
Q 001365 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCV--------LDHCGQGVLHFAAALGYDWALEPTTVAG-VNINFRDVNGWTAL 750 (1092)
Q Consensus 680 ~~lL~~a~k~~l~~~LvklLle~GadvN~--------~D~~G~TpLH~AA~~G~~~iVk~LL~~G-adin~~D~~G~TpL 750 (1092)
.-++++|+++|++++. .|..|.||||+||..|+.++|++|+++| ++++.+|..|+|||
T Consensus 251 -------------~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL 317 (373)
T 2fo1_E 251 -------------VASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPI 317 (373)
T ss_dssp -------------HHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHH
T ss_pred -------------HHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHH
Confidence 1278889999999986 6779999999999999999999999876 99999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 001365 751 HWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDL 809 (1092)
Q Consensus 751 H~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga 809 (1092)
|+|+..|+.++|++|+++|++++. +|..|.||||+|+.+|+.+++++|+++++
T Consensus 318 ~~A~~~g~~~iv~~Ll~~gad~~~------~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 318 MLAAQEGRIEVVMYLIQQGASVEA------VDATDHTARQLAQANNHHNIVDIFDRCRP 370 (373)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSC------CCSSSCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred HHHHHcCCHHHHHHHHHcCCCccC------CCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 999999999999999999999888 77999999999999999999999999884
No 19
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=3.5e-30 Score=270.32 Aligned_cols=204 Identities=20% Similarity=0.197 Sum_probs=168.7
Q ss_pred cChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcc--c-ccCCCCcHH
Q 001365 538 EAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVD--V-ADNCGDITS 614 (1092)
Q Consensus 538 ~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvn--a-~D~~G~TpL 614 (1092)
+.||||+||..|+.++++.|++.|.+.. ...+..|.||||+||..|+ +..+++|+..|++++ . .+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~~~~~~~~~~~~------- 69 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLL-LQKDQDGRIPLHWSVSFQA----HEITSFLLSKMENVNLDDYPD------- 69 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGT-TCCCTTSCCHHHHHHHTTC----HHHHHHHHHTCTTCCGGGCCC-------
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCcccc-ccCCCCCCCHHHHHHHcCC----HHHHHHHHhccccccccccCC-------
Confidence 3589999999999999999999998754 2357789999999999985 455578899885443 3 33
Q ss_pred hhhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHH
Q 001365 615 ENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVW 694 (1092)
Q Consensus 615 ~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~ 694 (1092)
..|++|||.|+..+...
T Consensus 70 -------------------------------------------~~g~t~L~~A~~~~~~~-------------------- 86 (228)
T 2dzn_A 70 -------------------------------------------DSGWTPFHIACSVGNLE-------------------- 86 (228)
T ss_dssp -------------------------------------------TTSCCHHHHHHHHCCHH--------------------
T ss_pred -------------------------------------------CCCCCHHHHHHHcCCHH--------------------
Confidence 34556666666544432
Q ss_pred HHHHHHhCC--CCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcC-CC
Q 001365 695 LVQKAAEGG--KGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG-AA 771 (1092)
Q Consensus 695 LvklLle~G--advN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~G-Ad 771 (1092)
+++.|+++| ++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++|+++| ++
T Consensus 87 ~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 166 (228)
T 2dzn_A 87 VVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA 166 (228)
T ss_dssp HHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC
T ss_pred HHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 677888888 888889999999999999999999999999999999999999999999999999999999999998 87
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCCcccCcccCCCCCcHH
Q 001365 772 PGALSDPTPKYPSGRTPADLASSIGHKGIAGYLA-ESDLSSALSAISLNKKDGDVAE 827 (1092)
Q Consensus 772 in~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LL-e~Ga~~h~adlnlkD~~G~ta~ 827 (1092)
++. +|..|+||||+|+..|+.+++++|+ +.| ++++.+|..|.++.
T Consensus 167 ~~~------~d~~g~t~L~~A~~~~~~~~v~~Ll~~~g-----a~~~~~~~~g~t~l 212 (228)
T 2dzn_A 167 VNW------QDKQGWTPLFHALAEGHGDAAVLLVEKYG-----AEYDLVDNKGAKAE 212 (228)
T ss_dssp SCC------CCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----CCSCCBCTTSCBGG
T ss_pred ccC------cCCCCCCHHHHHHHcCCHHHHHHHHHhcC-----CCCCccCCCCCcHH
Confidence 776 7789999999999999999999999 778 67889999997664
No 20
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=5.3e-30 Score=269.16 Aligned_cols=221 Identities=18% Similarity=0.119 Sum_probs=192.9
Q ss_pred CcccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCccccc-CCCCcH
Q 001365 535 SQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVAD-NCGDIT 613 (1092)
Q Consensus 535 ~~~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D-~~G~Tp 613 (1092)
+..+.|+||+||..|+.+++++|++.|++++ ..+..|.||||+||..|+ +..+++|++.|++++..+ ..|.||
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~~~~~~~~~~~~~~t~ 79 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAGYDVR--QPDKENVTLLHWAAINNR----IDLVKYYISKGAIVDQLGGDLNSTP 79 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTC----HHHHHHHHHTTCCTTCCBTTTTBCH
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcCCCcC--CCCCCCCCHHHHHHHhCC----HHHHHHHHHcCCcchhhcCCcCCCh
Confidence 4456789999999999999999999999876 566779999999999986 555678999999988764 459999
Q ss_pred Hhh----hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHH
Q 001365 614 SEN----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLK 688 (1092)
Q Consensus 614 L~~----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k 688 (1092)
||. ++.+++++|+. |++++.. +..|.+||+.|+..+...
T Consensus 80 L~~A~~~~~~~~v~~Ll~~g~~~~~~----------------------~~~g~t~l~~A~~~~~~~-------------- 123 (240)
T 3eu9_A 80 LHWATRQGHLSMVVQLMKYGADPSLI----------------------DGEGCSCIHLAAQFGHTS-------------- 123 (240)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCC----------------------CTTSCCHHHHHHHTTCHH--------------
T ss_pred hHHHHHcCCHHHHHHHHHcCCCCccc----------------------CCCCCCHHHHHHHcCHHH--------------
Confidence 995 66788887754 5655433 257889999988766532
Q ss_pred hhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCC-HhHHHHHHHCCCCccccCC-CCccHHHHHHHcCCHHHHHHHH
Q 001365 689 EKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGY-DWALEPTTVAGVNINFRDV-NGWTALHWAAYCGRERTVASLI 766 (1092)
Q Consensus 689 ~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~-~~iVk~LL~~Gadin~~D~-~G~TpLH~Aa~~G~~eiV~~LL 766 (1092)
+++.|+++|++++..|..|.||||+|+..|+ .+++++|++.|++++..+. .|.||||+|+..|+.++|++|+
T Consensus 124 ------~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 197 (240)
T 3eu9_A 124 ------IVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLL 197 (240)
T ss_dssp ------HHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred ------HHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHH
Confidence 7888999999999999999999999997776 8999999999999999997 9999999999999999999999
Q ss_pred HcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 001365 767 ALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDL 809 (1092)
Q Consensus 767 e~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga 809 (1092)
++|++++. +|..|.||||+|+..|+.+++++|++++.
T Consensus 198 ~~g~~~~~------~~~~g~t~l~~A~~~~~~~~v~~L~~~~~ 234 (240)
T 3eu9_A 198 EAGANVDA------QNIKGESALDLAKQRKNVWMINHLQEARQ 234 (240)
T ss_dssp HHTCCTTC------BCTTSCBHHHHHHHTTCHHHHHHHHHHC-
T ss_pred HcCCCCCC------cCCCCCCHHHHHHHcCcHHHHHHHHHhhh
Confidence 99999887 77999999999999999999999999984
No 21
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=3.7e-30 Score=269.62 Aligned_cols=193 Identities=18% Similarity=0.174 Sum_probs=154.7
Q ss_pred cccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCC-CcccccCCCCcHH
Q 001365 536 QQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIP-DVDVADNCGDITS 614 (1092)
Q Consensus 536 ~~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Ga-dvna~D~~G~TpL 614 (1092)
..+.||||+||..|+.+++++|++.|++++ ..+..|.||||+||..|+ ...+++|+..++ +++..+.
T Consensus 23 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~~~~~~~~~~~------ 90 (223)
T 2f8y_A 23 RTGETALHLAARYSRSDAAKRLLEASADAN--IQDNMGRTPLHAAVSADA----QGVFQILIRNRATDLDARMH------ 90 (223)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTC----HHHHHHHHHBTTSCTTCCCT------
T ss_pred CCCCchHHHHHHcCCHHHHHHHHHcCCCCC--CcCCCCCCHHHHHHHcCC----HHHHHHHHHcCCCCcccCCC------
Confidence 445677777777777777777777776655 445557777777776664 333345555554 4444444
Q ss_pred hhhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHH
Q 001365 615 ENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVW 694 (1092)
Q Consensus 615 ~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~ 694 (1092)
.+++||+.|+..+...
T Consensus 91 --------------------------------------------~g~t~L~~A~~~~~~~-------------------- 106 (223)
T 2f8y_A 91 --------------------------------------------DGTTPLILAARLAVEG-------------------- 106 (223)
T ss_dssp --------------------------------------------TCCCHHHHHHHHTCHH--------------------
T ss_pred --------------------------------------------CCCcHHHHHHHhCcHH--------------------
Confidence 4555555555544321
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 001365 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 774 (1092)
Q Consensus 695 LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~ 774 (1092)
+++.|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++.
T Consensus 107 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 186 (223)
T 2f8y_A 107 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI 186 (223)
T ss_dssp HHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 77889999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Q 001365 775 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLS 810 (1092)
Q Consensus 775 ~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~ 810 (1092)
+|..|.||||+|+..|+.+++++|+++|+.
T Consensus 187 ------~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 187 ------TDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp ------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred ------ccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 789999999999999999999999999954
No 22
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=7e-31 Score=300.13 Aligned_cols=235 Identities=16% Similarity=0.116 Sum_probs=195.9
Q ss_pred CcccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCC-CCCchHHHHHHHcCCCchhHHH------HHHHHhCCCCccccc
Q 001365 535 SQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ-KVGRVPFYVTCSNRLSCSEVRE------FEYRASHIPDVDVAD 607 (1092)
Q Consensus 535 ~~~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d-~~G~TPLHlAa~ng~~~seVv~------fe~Ll~~Gadvna~D 607 (1092)
+..+.||||+||..| .++++.|+.. +++ ..+ ..|+||||+||.+|+ .+++. .+.|+..|+++|..|
T Consensus 91 ~~~g~t~L~~Aa~~~-~~~~~~L~~~--~~n--~~d~~~g~t~Lh~Aa~~g~--~~~v~~Ll~~~~~~ll~~ga~vn~~d 163 (373)
T 2fo1_E 91 EPESPIKLHTEAAGS-YAITEPITRE--SVN--IIDPRHNRTVLHWIASNSS--AEKSEDLIVHEAKECIAAGADVNAMD 163 (373)
T ss_dssp ---CCCHHHHHHHSS-SCCCSCCSTT--TTT--TCCCSSCCCHHHHHHCTTC--CSCCTTHHHHHHHHHHHTCCCTTCCC
T ss_pred CCCCccHHHHHhcCC-chHHHHhccc--ccc--ccCCcCCCCHHHHHHHCCC--HHHHHHHHHHHHHHHHhcCCCCcCCC
Confidence 456789999999955 5788888654 334 344 679999999999986 33332 234568999999999
Q ss_pred CCCCcHHhh----hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHH
Q 001365 608 NCGDITSEN----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKL 682 (1092)
Q Consensus 608 ~~G~TpL~~----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~l 682 (1092)
..|.||||+ ++.+++++|+. |++++..+ ..|.|+||.|+..+...
T Consensus 164 ~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~----------------------~~g~t~L~~A~~~g~~~-------- 213 (373)
T 2fo1_E 164 CDENTPLMLAVLARRRRLVAYLMKAGADPTIYN----------------------KSERSALHQAAANRDFG-------- 213 (373)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC----------------------TTCCCHHHHHHHTTCHH--------
T ss_pred CCCCCHHHHHHHcChHHHHHHHHHCCCCCcccC----------------------CCCCCHHHHHHHCCCHH--------
Confidence 999999995 77788888754 77665432 57899999998876643
Q ss_pred HHHHHHhhhHHHHHHHHHhCC---CCCCcccCCCCcHHHHHHHcC---CHhHHHHHHHCCCCccc--------cCCCCcc
Q 001365 683 VQKLLKEKLQVWLVQKAAEGG---KGPCVLDHCGQGVLHFAAALG---YDWALEPTTVAGVNINF--------RDVNGWT 748 (1092)
Q Consensus 683 L~~a~k~~l~~~LvklLle~G---advN~~D~~G~TpLH~AA~~G---~~~iVk~LL~~Gadin~--------~D~~G~T 748 (1092)
++++|+++| ++++..|..|.||||+||..| +.+++++|+++|++++. +|..|+|
T Consensus 214 ------------~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t 281 (373)
T 2fo1_E 214 ------------MMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRT 281 (373)
T ss_dssp ------------HHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCC
T ss_pred ------------HHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCC
Confidence 778888888 899999999999999999998 89999999999999987 6779999
Q ss_pred HHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcHH
Q 001365 749 ALHWAAYCGRERTVASLIALG-AAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAE 827 (1092)
Q Consensus 749 pLH~Aa~~G~~eiV~~LLe~G-Adin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta~ 827 (1092)
|||+||..|+.++|++|+++| +++|. +|..|+||||+|+..|+.++|++|+++| ++++.+|..|.|+.
T Consensus 282 ~Lh~A~~~g~~~~v~~Ll~~~~~~~n~------~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-----ad~~~~d~~g~t~l 350 (373)
T 2fo1_E 282 ALHYAAQVSNMPIVKYLVGEKGSNKDK------QDEDGKTPIMLAAQEGRIEVVMYLIQQG-----ASVEAVDATDHTAR 350 (373)
T ss_dssp THHHHHSSCCHHHHHHHHHHSCCCTTC------CCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCSSCCCSSSCCHH
T ss_pred HHHHHHHhCCHHHHHHHHHhcCCCccC------cCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccCCCCCCCCHH
Confidence 999999999999999999886 88877 7899999999999999999999999998 78999999997664
Q ss_pred HH
Q 001365 828 VT 829 (1092)
Q Consensus 828 ia 829 (1092)
..
T Consensus 351 ~~ 352 (373)
T 2fo1_E 351 QL 352 (373)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 23
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=7.4e-30 Score=269.37 Aligned_cols=195 Identities=14% Similarity=0.102 Sum_probs=161.6
Q ss_pred cChHHHHHHHcCCcHHHHHHHHC-CCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCc-----ccccCCCC
Q 001365 538 EAENCKWSCMFGEIEVPAEIVAG-GVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDV-----DVADNCGD 611 (1092)
Q Consensus 538 ~~TpLH~A~~fG~veVv~~LL~~-Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadv-----na~D~~G~ 611 (1092)
+.||||+||..|+.++++.|++. |++++ ..+..|.||||+||..|+ +..+++|++.|+++ +..|.
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~--~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~~~~~~~~~~~~~~~--- 73 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVH--QRGAMGETALHIAALYDN----LEAAMVLMEAAPELVFEPMTSELY--- 73 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTT--CCCTTSCCHHHHHHHTTC----HHHHHHHHHHCGGGGGCCCCSTTT---
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcc--cCCCCCCCHHHHHHHcCC----HHHHHHHHHcCchhccccccccCC---
Confidence 57899999999999999999998 99877 567789999999999986 44557888888876 33333
Q ss_pred cHHhhhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhh
Q 001365 612 ITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKL 691 (1092)
Q Consensus 612 TpL~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l 691 (1092)
.|+||||.|+..+...
T Consensus 74 -----------------------------------------------~g~t~L~~A~~~~~~~----------------- 89 (232)
T 2rfa_A 74 -----------------------------------------------EGQTALHIAVINQNVN----------------- 89 (232)
T ss_dssp -----------------------------------------------TTCCHHHHHHHTTCHH-----------------
T ss_pred -----------------------------------------------CCcCHHHHHHHcCCHH-----------------
Confidence 4555555555544321
Q ss_pred HHHHHHHHHhCCCCCCcccC-------------CCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCC
Q 001365 692 QVWLVQKAAEGGKGPCVLDH-------------CGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (1092)
Q Consensus 692 ~~~LvklLle~GadvN~~D~-------------~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~ 758 (1092)
++++|+++|++++..+. .|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+
T Consensus 90 ---~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~ 166 (232)
T 2rfa_A 90 ---LVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPN 166 (232)
T ss_dssp ---HHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSC
T ss_pred ---HHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 55666666666666554 89999999999999999999999999999999999999999999999
Q ss_pred HHHH----HHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 001365 759 ERTV----ASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 808 (1092)
Q Consensus 759 ~eiV----~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 808 (1092)
.+++ ++|+++|++++.....+.+|..|+||||+|+..|+.+++++|+++|
T Consensus 167 ~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g 220 (232)
T 2rfa_A 167 KTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR 220 (232)
T ss_dssp HHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 9988 9999999988532212348899999999999999999999999998
No 24
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=4.7e-29 Score=263.70 Aligned_cols=209 Identities=17% Similarity=0.180 Sum_probs=184.5
Q ss_pred CCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhh----hHHHHHHHHhc-CCCCCCCCCCCC
Q 001365 565 CHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN----LRMQFGKLLCL-TSVSTPNYDPSN 639 (1092)
Q Consensus 565 n~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~----~~~~lvkLLl~-gadv~~~~~~~~ 639 (1092)
+....+..|.||||+||..|+ +..+++|++.|++++..+..|.||||. ++.+++++|+. |++++..
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~----- 73 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGH----VDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPK----- 73 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTC----HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCC-----
T ss_pred CcccccCCCCCHHHHHHHcCc----HHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCC-----
Confidence 444677889999999999986 555678999999999999999999995 77788888765 5555433
Q ss_pred chhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCC-CCCCcccCCCCcHHH
Q 001365 640 LSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGG-KGPCVLDHCGQGVLH 718 (1092)
Q Consensus 640 ~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~G-advN~~D~~G~TpLH 718 (1092)
+..|.+||+.++..+... ++++|++.| .+++..|..|.||||
T Consensus 74 -----------------~~~g~t~L~~A~~~~~~~--------------------~~~~Ll~~~~~~~~~~~~~g~t~L~ 116 (237)
T 3b7b_A 74 -----------------DAEGSTCLHLAAKKGHYE--------------------VVQYLLSNGQMDVNCQDDGGWTPMI 116 (237)
T ss_dssp -----------------CTTSCCHHHHHHHTTCHH--------------------HHHHHHTTTCCCTTCCCTTSCCHHH
T ss_pred -----------------CCCCCcHHHHHHHcCCHH--------------------HHHHHHhCCCCCcccCCCCCCCHHH
Confidence 257889999988766542 778899988 899999999999999
Q ss_pred HHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcH
Q 001365 719 FAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHK 798 (1092)
Q Consensus 719 ~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~ 798 (1092)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.
T Consensus 117 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~ 190 (237)
T 3b7b_A 117 WATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHA------VNIHGDSPLHIAARENRY 190 (237)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTC------CCTTCCCHHHHHHHTTCH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHHHhCCH
Confidence 99999999999999999999999999999999999999999999999999999887 778999999999999999
Q ss_pred HHHHHHHHcCCCCCcccCcccCCCCCcHHHHh
Q 001365 799 GIAGYLAESDLSSALSAISLNKKDGDVAEVTG 830 (1092)
Q Consensus 799 eiv~~LLe~Ga~~h~adlnlkD~~G~ta~iaa 830 (1092)
+++++|+++| ++++++|..|.|+...+
T Consensus 191 ~~v~~Ll~~g-----ad~~~~d~~g~t~l~~A 217 (237)
T 3b7b_A 191 DCVVLFLSRD-----SDVTLKNKEGETPLQCA 217 (237)
T ss_dssp HHHHHHHTTT-----CCTTCCCTTSCCHHHHS
T ss_pred hHHHHHHHcC-----CCCCccCCCCCCHHHHH
Confidence 9999999998 78999999998775444
No 25
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=9.9e-30 Score=273.81 Aligned_cols=217 Identities=17% Similarity=0.117 Sum_probs=155.8
Q ss_pred CCCCCCchHHHHHHHcCCC---------chhHHHHHHHHhCCCCcccc-cCCCCcHHhh----hHHHHHHHHhc-CCCCC
Q 001365 568 SSQKVGRVPFYVTCSNRLS---------CSEVREFEYRASHIPDVDVA-DNCGDITSEN----LRMQFGKLLCL-TSVST 632 (1092)
Q Consensus 568 ~~d~~G~TPLHlAa~ng~~---------~seVv~fe~Ll~~Gadvna~-D~~G~TpL~~----~~~~lvkLLl~-gadv~ 632 (1092)
.+|..|+||||+||..|.. ...+..+++|+..|++++.. |..|.||||+ ++.+++++|+. |++++
T Consensus 5 ~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 84 (253)
T 1yyh_A 5 VRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAN 84 (253)
T ss_dssp -----------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 5677899999999987610 01345567899999998664 8999999995 77788888754 66664
Q ss_pred CCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCC-CCCcccC
Q 001365 633 PNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGK-GPCVLDH 711 (1092)
Q Consensus 633 ~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~Ga-dvN~~D~ 711 (1092)
.. +..|+||||.|+..+... ++++|++.|+ +++..|.
T Consensus 85 ~~----------------------~~~g~t~L~~A~~~~~~~--------------------~v~~Ll~~~~~~~~~~~~ 122 (253)
T 1yyh_A 85 IQ----------------------DNMGRTPLHAAVSADAQG--------------------VFQILIRNRATDLDARMH 122 (253)
T ss_dssp CC----------------------CTTSCCHHHHHHHHTCHH--------------------HHHHHHHSTTSCTTCCCT
T ss_pred CC----------------------CCCCCCHHHHHHHcCCHH--------------------HHHHHHHcCCCCccccCC
Confidence 43 257899999998766542 7788898887 8999999
Q ss_pred CCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHH
Q 001365 712 CGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADL 791 (1092)
Q Consensus 712 ~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhl 791 (1092)
.|.||||+|+..|+.++|++|+++|++++.+|..|+||||+||..|+.++|++|+++|++++. +|..|.||||+
T Consensus 123 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~tpL~~ 196 (253)
T 1yyh_A 123 DGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM------QNNREETPLFL 196 (253)
T ss_dssp TCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHH
T ss_pred CCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999887 78999999999
Q ss_pred HHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcH-HHHhhhhhccc
Q 001365 792 ASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-EVTGATAVQTV 837 (1092)
Q Consensus 792 Aa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta-~iaa~~~v~~l 837 (1092)
|+..|+.+++++|+++| ++++++|..|.++ .++......++
T Consensus 197 A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~tpl~~A~~~g~~~i 238 (253)
T 1yyh_A 197 AAREGSYETAKVLLDHF-----ANRDITDHMDRLPRDIAQERMHHDI 238 (253)
T ss_dssp HHHHTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHCCCHHHHHHHHHcC-----CCccccccCCCCHHHHHHHcCCHHH
Confidence 99999999999999998 7899999999666 55554443333
No 26
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=2.9e-29 Score=274.56 Aligned_cols=233 Identities=19% Similarity=0.141 Sum_probs=180.5
Q ss_pred ccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhh
Q 001365 537 QEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN 616 (1092)
Q Consensus 537 ~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~ 616 (1092)
.+.|+||+||..|++++++.||+.|++++ ..+..|.||||+||..|+ +..+++|+..|++++..|..|.||||+
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~ga~~~~~~~~g~tpL~~ 112 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADIN--YANVDGLTALHQACIDDN----VDMVKFLVENGANINQPDNEGWIPLHA 112 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCTT--CBCTTCCBHHHHHHHTTC----HHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCc--ccCCCCCCHHHHHHHcCC----HHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 45689999999999999999999999977 556679999999999986 455578999999999999999999995
Q ss_pred ----hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHH-------
Q 001365 617 ----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQ------- 684 (1092)
Q Consensus 617 ----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~------- 684 (1092)
++.+++++|+. |++++..+ ..|.|||+.++..+..... ..++.
T Consensus 113 A~~~g~~~~v~~Ll~~g~~~~~~~----------------------~~g~t~l~~A~~~~~~~~~---~~ll~~~~~~~~ 167 (299)
T 1s70_B 113 AASCGYLDIAEYLISQGAHVGAVN----------------------SEGDTPLDIAEEEAMEELL---QNEVNRQGVDIE 167 (299)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCC----------------------TTSCCHHHHCCSHHHHHHH---HHHHHHHTCCHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCCcC----------------------CCCCCHHHHHHhcchHHHH---HHHHhhcCCCch
Confidence 77788888754 66654432 4677888877654322110 00000
Q ss_pred ---HHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHH
Q 001365 685 ---KLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERT 761 (1092)
Q Consensus 685 ---~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~ei 761 (1092)
......+...+..++..........+..|.||||+||..|+.++|++|+++|+++|.+|..|+||||+|+..|+.++
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~ 247 (299)
T 1s70_B 168 AARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEA 247 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred hhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHH
Confidence 00001111123334444455566678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHH
Q 001365 762 VASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE 806 (1092)
Q Consensus 762 V~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe 806 (1092)
|++|+++|+++++ +|..|.||||+|+.....-+.+++-+
T Consensus 248 v~~Ll~~gad~~~------~d~~g~t~l~~A~~~~~~~l~~l~~~ 286 (299)
T 1s70_B 248 CRILVENLCDMEA------VNKVGQTAFDVADEDILGYLEELQKK 286 (299)
T ss_dssp HHHHHHTTCCTTC------CCTTSCCTTTSCCSGGGHHHHHHHHH
T ss_pred HHHHHHcCCCCCC------cCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887 78999999999987544444444443
No 27
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=3e-30 Score=273.89 Aligned_cols=206 Identities=17% Similarity=0.138 Sum_probs=168.9
Q ss_pred CcccChHHHHHHHcCCcHHHHHHHHCCC----CCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCC
Q 001365 535 SQQEAENCKWSCMFGEIEVPAEIVAGGV----LRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCG 610 (1092)
Q Consensus 535 ~~~~~TpLH~A~~fG~veVv~~LL~~Ga----din~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G 610 (1092)
+..+.||||+||..|+.+++++|++.+. +++ ..+..|.||||+||..|+ +..+++|+..|++++.+|..|
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~--~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g~~~~~~~~~g 78 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLN--FQNNLQQTPLHLAVITNQ----PEIAEALLGAGCDPELRDFRG 78 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCC--CCCTTCCCHHHHHHHTTC----HHHHHCCCSCCCCSCCCCTTC
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhh--ccCCCCCCHHHHHHHcCC----HHHHHHHHHcCCCCCCcCCCC
Confidence 4567899999999999999999988776 444 667789999999999986 555678999999999888777
Q ss_pred CcHHhhhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhh
Q 001365 611 DITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEK 690 (1092)
Q Consensus 611 ~TpL~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~ 690 (1092)
.||||+ |+..+...
T Consensus 79 ~t~L~~--------------------------------------------------A~~~~~~~---------------- 92 (236)
T 1ikn_D 79 NTPLHL--------------------------------------------------ACEQGCLA---------------- 92 (236)
T ss_dssp CCHHHH--------------------------------------------------HHHHTCHH----------------
T ss_pred CCHHHH--------------------------------------------------HHHcCCHH----------------
Confidence 777773 22222211
Q ss_pred hHHHHHHHHHhCCCC------CCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCC-CCccHHHHHHHcCCHHHHH
Q 001365 691 LQVWLVQKAAEGGKG------PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDV-NGWTALHWAAYCGRERTVA 763 (1092)
Q Consensus 691 l~~~LvklLle~Gad------vN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~-~G~TpLH~Aa~~G~~eiV~ 763 (1092)
++++|++.|++ ++..|..|.||||+|+..|+.++|++|+++|++++.+|. .|+||||+|+..|+.++|+
T Consensus 93 ----~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~ 168 (236)
T 1ikn_D 93 ----SVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVS 168 (236)
T ss_dssp ----HHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHH
T ss_pred ----HHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 55566666654 467888999999999999999999999999999999998 9999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCc
Q 001365 764 SLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDV 825 (1092)
Q Consensus 764 ~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~t 825 (1092)
+|+++|++++. +|..|.||||+|+..|+.+++++|+++|+. ....+.+..|.+
T Consensus 169 ~Ll~~ga~~~~------~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~---~~~~~~~~~~~~ 221 (236)
T 1ikn_D 169 LLLKCGADVNR------VTYQGYSPYQLTWGRPSTRIQQQLGQLTLE---NLQMLPESEDEE 221 (236)
T ss_dssp HHHTTTCCSCC------CCTTCCCGGGGCTTSSCHHHHHHHHTTSCG---GGSSCCCCCTTT
T ss_pred HHHHcCCCCCc------ccCCCCCHHHHHHccCchHHHHHHHHcchh---hhhcCCccchHH
Confidence 99999999887 789999999999999999999999999954 122366666644
No 28
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=5.3e-29 Score=255.36 Aligned_cols=155 Identities=26% Similarity=0.318 Sum_probs=136.5
Q ss_pred hHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhhhHH
Q 001365 540 ENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRM 619 (1092)
Q Consensus 540 TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~~~~ 619 (1092)
++|+.||..|++++|+.||+.|+++| ..+..|+||||+|+..+. .+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn--~~d~~g~t~l~~a~~~~~--~~------------------------------ 51 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVN--ASDSDGRTPLHHAAENGH--KE------------------------------ 51 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTC--HH------------------------------
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCC--CcCCCCCCHHHHHHHcCC--HH------------------------------
Confidence 47899999999999999999999877 566779999999987763 11
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHH
Q 001365 620 QFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKA 699 (1092)
Q Consensus 620 ~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklL 699 (1092)
+++.|
T Consensus 52 ---------------------------------------------------------------------------~~~~l 56 (169)
T 4gpm_A 52 ---------------------------------------------------------------------------VVKLL 56 (169)
T ss_dssp ---------------------------------------------------------------------------HHHHH
T ss_pred ---------------------------------------------------------------------------HHHHH
Confidence 33446
Q ss_pred HhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 001365 700 AEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPT 779 (1092)
Q Consensus 700 le~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n 779 (1092)
++.|++++.+|..|+||||+||..|+.++|++||++|+++|.+|..|+||||+||..|+.++|++|+++|++++.
T Consensus 57 l~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~----- 131 (169)
T 4gpm_A 57 ISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNT----- 131 (169)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-----
T ss_pred HhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-----
Confidence 677888999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 001365 780 PKYPSGRTPADLASSIGHKGIAGYLAESDL 809 (1092)
Q Consensus 780 ~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga 809 (1092)
+|..|+||||+|+..|+.+++++|+++|+
T Consensus 132 -~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 132 -SDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp -CCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred -cCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 78999999999999999999999999993
No 29
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=1e-28 Score=254.51 Aligned_cols=190 Identities=19% Similarity=0.141 Sum_probs=165.7
Q ss_pred ccChHHHHHHHcCCcHHHHHHHHCCC-CCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHh
Q 001365 537 QEAENCKWSCMFGEIEVPAEIVAGGV-LRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE 615 (1092)
Q Consensus 537 ~~~TpLH~A~~fG~veVv~~LL~~Ga-din~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~ 615 (1092)
.+.||||+||..|+.++++.|+..+. +++ ..+..|.||||+||..|+ +..+++|++.|++++..|..|.||||
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~--~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g~~~~~~~~~g~t~l~ 77 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVD--EVDTEGNTPLNIAVHNND----IEIAKALIDRGADINLQNSISDSPYL 77 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTT--CCCTTSCCHHHHHHHHTC----HHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCC--CCCCCCCCHHHHHHHcCC----HHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 46789999999999999999999886 655 567779999999999986 55567899999999888776666665
Q ss_pred hhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHH
Q 001365 616 NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWL 695 (1092)
Q Consensus 616 ~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~L 695 (1092)
.|+..+... +
T Consensus 78 --------------------------------------------------~A~~~~~~~--------------------~ 87 (201)
T 3hra_A 78 --------------------------------------------------YAGAQGRTE--------------------I 87 (201)
T ss_dssp --------------------------------------------------HHHHTTCHH--------------------H
T ss_pred --------------------------------------------------HHHHcCCHH--------------------H
Confidence 333322221 5
Q ss_pred HHHHH-hCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCC-CCccccCCCCccHHHHHHHcCC-----HHHHHHHHHc
Q 001365 696 VQKAA-EGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAG-VNINFRDVNGWTALHWAAYCGR-----ERTVASLIAL 768 (1092)
Q Consensus 696 vklLl-e~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~G-adin~~D~~G~TpLH~Aa~~G~-----~eiV~~LLe~ 768 (1092)
+++|+ ..+++++..|..|.||||+|+..|+.++|++|+++| ++++.+|..|+||||+|+..|+ .++|++|+++
T Consensus 88 ~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ 167 (201)
T 3hra_A 88 LAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMEN 167 (201)
T ss_dssp HHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHT
T ss_pred HHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHC
Confidence 56666 677899999999999999999999999999999999 9999999999999999999998 9999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 001365 769 GAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 808 (1092)
Q Consensus 769 GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 808 (1092)
|++++. +|..|+||||+|+..|+.+++++|+++|
T Consensus 168 ga~~~~------~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 168 GADQSI------KDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp TCCTTC------CCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCCCc------cCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 999887 7899999999999999999999999876
No 30
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.96 E-value=6.9e-29 Score=262.21 Aligned_cols=213 Identities=15% Similarity=0.105 Sum_probs=179.1
Q ss_pred CCCCCCchHHHHHHHcCCCchhHHHHHHHHh----CCCCcccccCCCCcHHhh----hHHHHHHHHhc-CCCCCCCCCCC
Q 001365 568 SSQKVGRVPFYVTCSNRLSCSEVREFEYRAS----HIPDVDVADNCGDITSEN----LRMQFGKLLCL-TSVSTPNYDPS 638 (1092)
Q Consensus 568 ~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~----~Gadvna~D~~G~TpL~~----~~~~lvkLLl~-gadv~~~~~~~ 638 (1092)
..|..|.||||+||..|+ +..+++|++ .|++++..|..|.||||. ++.+++++|+. |++++..
T Consensus 4 ~~d~~g~t~L~~A~~~g~----~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~---- 75 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQGN----LPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMAL---- 75 (241)
T ss_dssp ---CTTCCHHHHHHHTTC----HHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC----
T ss_pred ccCCCCCcHHHHHHHcCC----HHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCcccc----
Confidence 456789999999999986 334455654 899999999999999995 77788888754 6665443
Q ss_pred CchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCC----CCCcccCCCC
Q 001365 639 NLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGK----GPCVLDHCGQ 714 (1092)
Q Consensus 639 ~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~Ga----dvN~~D~~G~ 714 (1092)
+..|++||+.++..+... +++.|++.|+ +++..|..|.
T Consensus 76 ------------------~~~g~t~l~~A~~~~~~~--------------------~~~~Ll~~~~~~~~~~~~~~~~g~ 117 (241)
T 1k1a_A 76 ------------------DRHGQTAAHLACEHRSPT--------------------CLRALLDSAAPGTLDLEARNYDGL 117 (241)
T ss_dssp ------------------CTTSCCHHHHHHHTTCHH--------------------HHHHHHHHSCTTSCCTTCCCTTSC
T ss_pred ------------------CCCCCCHHHHHHHcCCHH--------------------HHHHHHHcCCCccccccccCcCCC
Confidence 257899999998866542 6777888877 8999999999
Q ss_pred cHHHHHHHcCCHhHHHHHHHCCCCccccC-CCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 001365 715 GVLHFAAALGYDWALEPTTVAGVNINFRD-VNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLAS 793 (1092)
Q Consensus 715 TpLH~AA~~G~~~iVk~LL~~Gadin~~D-~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa 793 (1092)
||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+..|+.++|++|+++|++++. +|..|.||||+|+
T Consensus 118 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~ 191 (241)
T 1k1a_A 118 TALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNA------QMYSGSSALHSAS 191 (241)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------BCTTSCBHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHHH
Confidence 99999999999999999999999999999 8899999999999999999999999999887 7799999999999
Q ss_pred HcCcHHHHHHHHHcCCCCCcccCcccCCCCCcH-HHHhhhhhccc
Q 001365 794 SIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-EVTGATAVQTV 837 (1092)
Q Consensus 794 ~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta-~iaa~~~v~~l 837 (1092)
..|+.+++++|+++| ++++.+|..|.|+ .++......++
T Consensus 192 ~~~~~~~v~~Ll~~g-----a~~~~~~~~g~tpl~~A~~~~~~~i 231 (241)
T 1k1a_A 192 GRGLLPLVRTLVRSG-----ADSSLKNCHNDTPLMVARSRRVIDI 231 (241)
T ss_dssp HHTCHHHHHHHHHTT-----CCTTCCCTTSCCTTTTCSSHHHHHH
T ss_pred HcCCHHHHHHHHhcC-----CCCCCcCCCCCCHHHHHHhcCcHHH
Confidence 999999999999998 7899999999665 44444433333
No 31
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.96 E-value=1.3e-28 Score=266.64 Aligned_cols=198 Identities=13% Similarity=0.025 Sum_probs=174.1
Q ss_pred CCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhh----hHHHHHHHHhc-CCCCCCCCCCCCchhhHHH
Q 001365 572 VGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQL 646 (1092)
Q Consensus 572 ~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~l 646 (1092)
.|+||||+||..|+ +..+++|++.|+++|..|..|.||||. ++.+++++|+. |++++..+
T Consensus 2 ~g~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~----------- 66 (261)
T 2xai_A 2 SDWSPMHEAAIHGH----QLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVT----------- 66 (261)
T ss_dssp --CCHHHHHHHHTC----HHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-----------
T ss_pred CCCCHHHHHHHcCC----HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-----------
Confidence 48999999999986 555678999999999999999999995 77788888754 66665432
Q ss_pred HHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCH
Q 001365 647 NSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYD 726 (1092)
Q Consensus 647 l~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~ 726 (1092)
..|+||||.|+..+... ++++|+++|++++. +..|.||||+|+..|+.
T Consensus 67 -----------~~g~t~L~~A~~~~~~~--------------------~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~ 114 (261)
T 2xai_A 67 -----------ADWHTPLFNACVSGSWD--------------------CVNLLLQHGASVQP-ESDLASPIHEAARRGHV 114 (261)
T ss_dssp -----------TTSCCHHHHHHHHTCHH--------------------HHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCH
T ss_pred -----------CCCCCHHHHHHHcCCHH--------------------HHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcH
Confidence 57899999998876543 78889999999985 55699999999999999
Q ss_pred hHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHH
Q 001365 727 WALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE 806 (1092)
Q Consensus 727 ~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe 806 (1092)
++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++|+++|. |..|.||||+|+..|+.+++++|++
T Consensus 115 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------~~~g~t~Lh~A~~~~~~~~v~~Ll~ 187 (261)
T 2xai_A 115 ECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-------GKGQDSPLHAVARTASEELACLLMD 187 (261)
T ss_dssp HHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-------CBTTBCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-------CCCCCChHHHHHHcCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999874 5789999999999999999999999
Q ss_pred cCCCCCcccCcccCCCCCcHHH
Q 001365 807 SDLSSALSAISLNKKDGDVAEV 828 (1092)
Q Consensus 807 ~Ga~~h~adlnlkD~~G~ta~i 828 (1092)
+| ++++.+|..|.|+..
T Consensus 188 ~g-----ad~~~~d~~g~tpl~ 204 (261)
T 2xai_A 188 FG-----ADTQAKNAEGKRPVE 204 (261)
T ss_dssp TT-----CCTTCCCTTSCCGGG
T ss_pred cC-----CCCCCcCCCCCChhh
Confidence 98 789999999977643
No 32
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=7.6e-29 Score=271.92 Aligned_cols=206 Identities=16% Similarity=0.039 Sum_probs=162.0
Q ss_pred CCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCC--------cccccCCCCcHHhhh----H-HHHH-HHHhcCCCCCC
Q 001365 568 SSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPD--------VDVADNCGDITSENL----R-MQFG-KLLCLTSVSTP 633 (1092)
Q Consensus 568 ~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gad--------vna~D~~G~TpL~~~----~-~~lv-kLLl~gadv~~ 633 (1092)
..|..+.+||+.||.+|+ +..+++|++.|++ ++..|..|.|||+.. . ..++ .||..|++++.
T Consensus 6 kkd~~~~~~L~~A~~~G~----~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~ 81 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGD----LEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNV 81 (269)
T ss_dssp -CCCHHHHHHHHHHHTTC----HHHHHHHHTCC----------------------------------------CCCCTTC
T ss_pred ccCccchhHHHHHHHcCC----HHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCC
Confidence 346678999999999986 5555789988875 566788899999852 1 2233 34456787765
Q ss_pred CCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCC
Q 001365 634 NYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCG 713 (1092)
Q Consensus 634 ~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G 713 (1092)
.+ .+|+||||.|+..+... ++++|++.|++++.++..|
T Consensus 82 ~d----------------------~~G~TpLh~A~~~g~~~--------------------~v~~Ll~~~a~~~~~~~~g 119 (269)
T 4b93_B 82 TS----------------------QDGSSPLHVAALHGRAD--------------------LIPLLLKHGANAGARNADQ 119 (269)
T ss_dssp CC----------------------TTSCCHHHHHHHTTCTT--------------------HHHHHHHTTCCTTCCCTTC
T ss_pred cC----------------------CCCCCHHHHHHHcCcHH--------------------HHHHHHhcCCCcCccCCCC
Confidence 43 58999999999988775 7888999999999999999
Q ss_pred CcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 001365 714 QGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLAS 793 (1092)
Q Consensus 714 ~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa 793 (1092)
.||||+|+..++.+++++|+++|+++|.+|..|+||||+||..|+.++|++||++|+++|. +|..|+||||+|+
T Consensus 120 ~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~------~~~~g~t~Lh~A~ 193 (269)
T 4b93_B 120 AVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINA------SNNKGNTALHEAV 193 (269)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTC------BCTTSCBHHHHHH
T ss_pred CCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCc------cccCCCcHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999887 7799999999999
Q ss_pred HcCcHHHHHHHHHcCCCCCcccCcccCCCCCcHHHHh
Q 001365 794 SIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTG 830 (1092)
Q Consensus 794 ~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta~iaa 830 (1092)
..|+.++|++|+++| ++++++|..|.||...+
T Consensus 194 ~~g~~~~v~~Ll~~G-----ad~~~~d~~G~TpL~~A 225 (269)
T 4b93_B 194 IEKHVFVVELLLLHG-----ASVQVLNKRQRTAVDCA 225 (269)
T ss_dssp HTTCHHHHHHHHHTT-----CCSCCCCTTSCCSGGGS
T ss_pred HcCCHHHHHHHHHCC-----CCCCCcCCCCCCHHHHH
Confidence 999999999999998 78999999997765443
No 33
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=2.3e-29 Score=270.39 Aligned_cols=208 Identities=13% Similarity=0.027 Sum_probs=168.7
Q ss_pred cChHHHHHHHcCCcH----HHHHHHHCCCCCCCC--CCCCCCchHHHHHHHc---CCCchhHHHHHHHHhCCCCcccccC
Q 001365 538 EAENCKWSCMFGEIE----VPAEIVAGGVLRCHT--SSQKVGRVPFYVTCSN---RLSCSEVREFEYRASHIPDVDVADN 608 (1092)
Q Consensus 538 ~~TpLH~A~~fG~ve----Vv~~LL~~Gadin~~--~~d~~G~TPLHlAa~n---g~~~seVv~fe~Ll~~Gadvna~D~ 608 (1092)
+.||||+||..|+.+ ++++|++.|++++.. ..+..|+||||+||.+ |+ .+++ ++|+..|++++..+.
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~--~~~v--~~Ll~~g~~~~~~~~ 77 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGV--NACI--MPLLQIDKDSGNPKP 77 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTB--CTTH--HHHHHHHHHTTCSSC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccch--HHHH--HHHHhcCCcccchhh
Confidence 568999999999997 667777899997730 1567799999999998 74 4444 678888877665431
Q ss_pred CCCcHHhhhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHH
Q 001365 609 CGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLK 688 (1092)
Q Consensus 609 ~G~TpL~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k 688 (1092)
+ +. ... ...+..|+||||.|+..+...
T Consensus 78 -----~----------~~--~~~----------------------~~~d~~g~t~L~~A~~~g~~~-------------- 104 (256)
T 2etb_A 78 -----L----------VN--AQC----------------------TDEFYQGHSALHIAIEKRSLQ-------------- 104 (256)
T ss_dssp -----G----------GG--CCC----------------------CSTTTTTCCHHHHHHHTTCHH--------------
T ss_pred -----h----------cc--ccc----------------------ccccccCCCHHHHHHHcCCHH--------------
Confidence 0 00 000 011246889999988876543
Q ss_pred hhhHHHHHHHHHhCCCCCCcccCC-------------CCcHHHHHHHcCCHhHHHHHHH---CCCCccccCCCCccHHHH
Q 001365 689 EKLQVWLVQKAAEGGKGPCVLDHC-------------GQGVLHFAAALGYDWALEPTTV---AGVNINFRDVNGWTALHW 752 (1092)
Q Consensus 689 ~~l~~~LvklLle~GadvN~~D~~-------------G~TpLH~AA~~G~~~iVk~LL~---~Gadin~~D~~G~TpLH~ 752 (1092)
++++|+++|+++|.+|.. |.||||+||..|+.++|++|++ +|+++|.+|..|+||||+
T Consensus 105 ------~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~ 178 (256)
T 2etb_A 105 ------CVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHA 178 (256)
T ss_dssp ------HHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHH
T ss_pred ------HHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHH
Confidence 788899999999999986 9999999999999999999999 999999999999999999
Q ss_pred HHH--cCCHH-------HHHHHHHcCCCCCCCCCC-CCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 001365 753 AAY--CGRER-------TVASLIALGAAPGALSDP-TPKYPSGRTPADLASSIGHKGIAGYLAESD 808 (1092)
Q Consensus 753 Aa~--~G~~e-------iV~~LLe~GAdin~~~D~-n~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 808 (1092)
||. .++.+ +|++|+++|++++...+. +.+|..|+||||+|+..|+.+++++|+++|
T Consensus 179 A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 244 (256)
T 2etb_A 179 LVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQRE 244 (256)
T ss_dssp HHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 999 88988 999999999998211000 238899999999999999999999999988
No 34
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=2.8e-29 Score=276.42 Aligned_cols=213 Identities=10% Similarity=-0.033 Sum_probs=152.1
Q ss_pred CcCCcccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCC
Q 001365 532 FLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGD 611 (1092)
Q Consensus 532 fl~~~~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~ 611 (1092)
...+..+.||||+||..|+.+++++|++.|++++. .+ |.||||+||..|+ . ..+++|+..|++++.+|..|.
T Consensus 25 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~--g~t~L~~A~~~g~--~--~~v~~Ll~~ga~~~~~d~~g~ 96 (285)
T 3kea_A 25 FKADVHGHSASYYAIADNNVRLVCTLLNAGALKNL--LE--NEFPLHQAATLED--T--KIVKILLFSGLDDSQFDDKGN 96 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSC--CT--TCCHHHHHTTSSS--C--HHHHHHHHTTCCTTCCCTTSC
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC--CC--CCCHHHHHHHcCC--H--HHHHHHHHCCCCCCCcCCCCC
Confidence 34556789999999999999999999999998774 33 9999999999985 4 445789999999999999999
Q ss_pred cHHhh----hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCc-chHHHHhhhhcCCChHHHHHHHHHH
Q 001365 612 ITSEN----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDD-WDLMLKLTAEEKFSSEEVKEKLVQK 685 (1092)
Q Consensus 612 TpL~~----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g-~t~L~~a~~~~~~s~~~~~~~lL~~ 685 (1092)
||||+ ++.+++++|+. |++++.. +..| .||||.|+..+...
T Consensus 97 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~----------------------~~~g~~t~L~~A~~~~~~~----------- 143 (285)
T 3kea_A 97 TALYYAVDSGNMQTVKLFVKKNWRLMFY----------------------GKTGWKTSFYHAVMLNDVS----------- 143 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCGGGGGC----------------------SSSGGGSHHHHHHHTTCHH-----------
T ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCcc----------------------CCCCCCCHHHHHHHcCCHH-----------
Confidence 99884 55566666543 4444322 2345 47777766655432
Q ss_pred HHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccH-HHHHHHcCCHHHHHH
Q 001365 686 LLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTA-LHWAAYCGRERTVAS 764 (1092)
Q Consensus 686 a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~Tp-LH~Aa~~G~~eiV~~ 764 (1092)
++++|+++|+++... ..|.||||+|+..|+.++|++|+++|++++.+|..|+|| ||+|+..|+.++|++
T Consensus 144 ---------~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~ 213 (285)
T 3kea_A 144 ---------IVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQA 213 (285)
T ss_dssp ---------HHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHH
T ss_pred ---------HHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHH
Confidence 566667776665222 166777777777777777777777777777777777776 777777777777777
Q ss_pred HHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 001365 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 808 (1092)
Q Consensus 765 LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 808 (1092)
|+++|++++. +| +.|+..|+.+++++|+++|
T Consensus 214 Ll~~gad~~~------~~-------~~a~~~~~~~iv~~Ll~~g 244 (285)
T 3kea_A 214 LFKYDINIYS------AN-------LENVLLDDAEIAKMIIEKH 244 (285)
T ss_dssp HTTSCBCSTT------TT-------GGGGTTTCHHHHHHHHHHH
T ss_pred HHHcCCCCCC------CC-------hhhhhcCCHHHHHHHHHcC
Confidence 7777777665 22 2456667777777777766
No 35
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=1.3e-27 Score=265.23 Aligned_cols=252 Identities=15% Similarity=0.122 Sum_probs=210.4
Q ss_pred cccChHHHHHHHcCCcHHHHHHHHC-CCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHH
Q 001365 536 QQEAENCKWSCMFGEIEVPAEIVAG-GVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITS 614 (1092)
Q Consensus 536 ~~~~TpLH~A~~fG~veVv~~LL~~-Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL 614 (1092)
..+.|+||+||..|+.++++.|+.. |++++ ..+..|.||||+||..|+ +..+++|++.|++++..|..|.|||
T Consensus 22 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~--~~d~~g~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~~~~g~t~L 95 (351)
T 3utm_A 22 EYKKDELLEAARSGNEEKLMALLTPLNVNCH--ASDGRKSTPLHLAAGYNR----VRIVQLLLQHGADVHAKDKGGLVPL 95 (351)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHCCTTTTTCC--CSSTTCCCHHHHHHHTTC----HHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred cccchhHHHHHHcCCHHHHHHHHHhcCCCcc--cCCCCCCCHHHHHHHcCC----HHHHHHHHHcCCCCCccCCCCCcHH
Confidence 3457899999999999999888765 67755 567779999999999986 5556789999999999999999999
Q ss_pred hh----hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHh
Q 001365 615 EN----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKE 689 (1092)
Q Consensus 615 ~~----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~ 689 (1092)
|. ++.+++++|+. |++++.. +..|+|||+.|+..+...
T Consensus 96 ~~A~~~g~~~iv~~Ll~~g~~~~~~----------------------~~~g~t~L~~A~~~~~~~--------------- 138 (351)
T 3utm_A 96 HNACSYGHYEVTELLLKHGACVNAM----------------------DLWQFTPLHEAASKNRVE--------------- 138 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCC----------------------CTTCCCHHHHHHHTTCHH---------------
T ss_pred HHHHHCCCHHHHHHHHHCCCCCCCC----------------------CCCCCCHHHHHHHcCCHH---------------
Confidence 95 77888888855 6665443 257899999998866543
Q ss_pred hhHHHHHHHHHhCCCCCCcccCCCCcHHHHH---------------------HHcCCHhHHHHHHHCCCCccccCCCCcc
Q 001365 690 KLQVWLVQKAAEGGKGPCVLDHCGQGVLHFA---------------------AALGYDWALEPTTVAGVNINFRDVNGWT 748 (1092)
Q Consensus 690 ~l~~~LvklLle~GadvN~~D~~G~TpLH~A---------------------A~~G~~~iVk~LL~~Gadin~~D~~G~T 748 (1092)
++++|+++|++++..+..|.||||+| +..+..+.+..++..+......+..|+|
T Consensus 139 -----~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t 213 (351)
T 3utm_A 139 -----VCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHET 213 (351)
T ss_dssp -----HHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCC
T ss_pred -----HHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCC
Confidence 78899999999999999999998765 5667778888888877776678889999
Q ss_pred HHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCc
Q 001365 749 ALHWAAYC---GRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDV 825 (1092)
Q Consensus 749 pLH~Aa~~---G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~t 825 (1092)
|||+|+.. +..+++++|+++|+++|. +|..|+||||+|+..|+.+++++|+++| ++++.+|..|.|
T Consensus 214 ~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~n~~d~~g~t 282 (351)
T 3utm_A 214 ALHCAVASLHPKRKQVAELLLRKGANVNE------KNKDFMTPLHVAAERAHNDVMEVLHKHG-----AKMNALDSLGQT 282 (351)
T ss_dssp HHHHHHHCCSTTHHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCC
T ss_pred HHHHHHHHhCccHHHHHHHHHHcCCCcCC------cCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCCCCC
Confidence 99999999 558999999999999887 7799999999999999999999999998 789999999977
Q ss_pred HHHHh-h----hhhccccccCCCCCC
Q 001365 826 AEVTG-A----TAVQTVPQRCPTPVS 846 (1092)
Q Consensus 826 a~iaa-~----~~v~~l~~~~as~~s 846 (1092)
+...+ . ..++.|.+..+.+..
T Consensus 283 ~L~~A~~~~~~~~v~~Ll~~gad~~~ 308 (351)
T 3utm_A 283 ALHRAALAGHLQTCRLLLSYGSDPSI 308 (351)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCC
Confidence 64333 3 456667777666554
No 36
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=7.7e-29 Score=269.15 Aligned_cols=223 Identities=13% Similarity=0.094 Sum_probs=169.2
Q ss_pred CCcccChHHHHHHHcCCcHHHHHHHH----CCCCCCCC--CCCCCCchHHHHHHHc---CCCchhHHHHHHHHhCCCCcc
Q 001365 534 MSQQEAENCKWSCMFGEIEVPAEIVA----GGVLRCHT--SSQKVGRVPFYVTCSN---RLSCSEVREFEYRASHIPDVD 604 (1092)
Q Consensus 534 ~~~~~~TpLH~A~~fG~veVv~~LL~----~Gadin~~--~~d~~G~TPLHlAa~n---g~~~seVv~fe~Ll~~Gadvn 604 (1092)
.+..+.||||+||..|++++++.||+ .|++++.. ..+..|+||||+||.+ |+ .+ .+++|+..|++++
T Consensus 9 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~--~~--~v~~Ll~~ga~~~ 84 (273)
T 2pnn_A 9 PRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQ--ND--TIALLLDVARKTD 84 (273)
T ss_dssp --CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTB--CH--HHHHHHHHHHHTT
T ss_pred CCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCC--hH--HHHHHHHhhcccc
Confidence 34567899999999999999998886 55554421 2367899999999986 53 34 4467888776543
Q ss_pred cccCCCCcHHhhhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHH
Q 001365 605 VADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQ 684 (1092)
Q Consensus 605 a~D~~G~TpL~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~ 684 (1092)
.. ..++... . ...+..|+||||.|+..+...
T Consensus 85 ~~---------------~~~i~~~--~----------------------~~~d~~g~tpL~~A~~~g~~~---------- 115 (273)
T 2pnn_A 85 SL---------------KQFVNAS--Y----------------------TDSYYKGQTALHIAIERRNMT---------- 115 (273)
T ss_dssp CH---------------HHHHTCC--C----------------------CSTTTTTCCHHHHHHHTTCHH----------
T ss_pred ch---------------hHHhhcc--c----------------------ccccCCCCCHHHHHHHcCCHH----------
Confidence 21 0011000 0 011257889999998876643
Q ss_pred HHHHhhhHHHHHHHHHhCCCCCCcccC--------------CCCcHHHHHHHcCCHhHHHHHHH---CCCCccccCCCCc
Q 001365 685 KLLKEKLQVWLVQKAAEGGKGPCVLDH--------------CGQGVLHFAAALGYDWALEPTTV---AGVNINFRDVNGW 747 (1092)
Q Consensus 685 ~a~k~~l~~~LvklLle~GadvN~~D~--------------~G~TpLH~AA~~G~~~iVk~LL~---~Gadin~~D~~G~ 747 (1092)
++++|+++|+++|.++. .|.||||+||..|+.++|++||+ +|++++.+|..|+
T Consensus 116 ----------~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~ 185 (273)
T 2pnn_A 116 ----------LVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGN 185 (273)
T ss_dssp ----------HHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSC
T ss_pred ----------HHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCC
Confidence 78889999999999997 79999999999999999999999 9999999999999
Q ss_pred cHHHHHHHcCC---------HHHHHHHHHcCCCCCCCCC-CCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCc
Q 001365 748 TALHWAAYCGR---------ERTVASLIALGAAPGALSD-PTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAIS 817 (1092)
Q Consensus 748 TpLH~Aa~~G~---------~eiV~~LLe~GAdin~~~D-~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adln 817 (1092)
||||+||..|+ .++|++|+++|+++|...+ ++.+|..|+||||+|+..|+.+++++|+++|+. |..
T Consensus 186 tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~----dp~ 261 (273)
T 2pnn_A 186 TVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH----EPE 261 (273)
T ss_dssp CHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-------
T ss_pred cHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCC----Cch
Confidence 99999999998 8999999999999874110 123789999999999999999999999999952 454
Q ss_pred ccCCCC
Q 001365 818 LNKKDG 823 (1092)
Q Consensus 818 lkD~~G 823 (1092)
.....+
T Consensus 262 ~~~~~~ 267 (273)
T 2pnn_A 262 CRHAAA 267 (273)
T ss_dssp ------
T ss_pred hhhhhh
Confidence 444443
No 37
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.95 E-value=1.9e-28 Score=277.01 Aligned_cols=209 Identities=16% Similarity=0.097 Sum_probs=177.8
Q ss_pred CCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhh----hHHHHHHHHhc-CCCCCCCCCCCCchh
Q 001365 568 SSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN----LRMQFGKLLCL-TSVSTPNYDPSNLSD 642 (1092)
Q Consensus 568 ~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~----~~~~lvkLLl~-gadv~~~~~~~~~~~ 642 (1092)
..|..|.||||+||..|+ +..+++|++.|++++..|..|.||||+ ++.+++++|+. +++++.
T Consensus 15 ~~d~~g~t~L~~Aa~~g~----~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--------- 81 (364)
T 3ljn_A 15 KSDDENMEKIHVAARKGQ----TDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--------- 81 (364)
T ss_dssp -CCHHHHHHHHHHHHHTC----HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC---------
T ss_pred ccCCCCCCHHHHHHHcCC----HHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc---------
Confidence 556779999999999986 555678999999999999999999995 77889988865 553321
Q ss_pred hHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhC----CCCCCc----------
Q 001365 643 ISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEG----GKGPCV---------- 708 (1092)
Q Consensus 643 ~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~----GadvN~---------- 708 (1092)
..|++||+.|+..++.. ++++|++. |++++.
T Consensus 82 ---------------~~g~t~L~~A~~~g~~~--------------------~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 126 (364)
T 3ljn_A 82 ---------------WHGQKPIHLAVMANKTD--------------------LVVALVEGAKERGQMPESLLNECDEREV 126 (364)
T ss_dssp ---------------BTTBCHHHHHHHTTCHH--------------------HHHHHHHHHHHHTCCHHHHHTCCCCCCE
T ss_pred ---------------cCCCCHHHHHHHcCCHH--------------------HHHHHHHhccccCCCHHHHHhhcchHhh
Confidence 36899999999877643 55566665 777776
Q ss_pred -------ccCCCCcHHHHHHHcC--CHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 001365 709 -------LDHCGQGVLHFAAALG--YDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPT 779 (1092)
Q Consensus 709 -------~D~~G~TpLH~AA~~G--~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n 779 (1092)
.|..|.||||+||..| +.++|++|+++|++++.+|..|+||||+||..|+.++|++|+++|++.... +++
T Consensus 127 ~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~ 205 (364)
T 3ljn_A 127 NEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSL-RLD 205 (364)
T ss_dssp EEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSC-CTT
T ss_pred hhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccc-ccc
Confidence 8999999999999999 999999999999999999999999999999999999999999999992221 234
Q ss_pred CCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcHHHHh
Q 001365 780 PKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTG 830 (1092)
Q Consensus 780 ~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta~iaa 830 (1092)
.+|..|+||||+|+..|+.++|++|+++| ++++.+|..|.|+...+
T Consensus 206 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~g~tpL~~A 251 (364)
T 3ljn_A 206 YANKQGNSHLHWAILINWEDVAMRFVEMG-----IDVNMEDNEHTVPLYLS 251 (364)
T ss_dssp CCCTTCCCTTHHHHTTTCHHHHHHHHTTT-----CCTTCCCTTSCCHHHHH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHHH
Confidence 48899999999999999999999999998 78999999997775444
No 38
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=3.3e-28 Score=262.69 Aligned_cols=215 Identities=14% Similarity=0.063 Sum_probs=151.4
Q ss_pred CCcccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCC----
Q 001365 534 MSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNC---- 609 (1092)
Q Consensus 534 ~~~~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~---- 609 (1092)
.+..+.||||+||..|+.+++++|++.|++++ ..+..|+||||+||..|+ ...+++|+..|++.+.....
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~--~~~~~g~tpL~~A~~~~~----~~~v~~Ll~~~~~~~~~~~~~~~~ 114 (282)
T 1oy3_D 41 QNDLGQTALHLAAILGEASTVEKLYAAGAGVL--VAERGGHTALHLACRVRA----HTCACVLLQPRPSHPRDASDTYLT 114 (282)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS--CCCTTSCCHHHHHTTTTC----HHHHHHHSSSCCSSCCCC------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC--CCCCCCCCHHHHHHHcCC----cchhHhhhccCCCCchhhHHHHhh
Confidence 34567899999999999999999999999977 567779999999999885 45557899998875443211
Q ss_pred ---------CCcHHhhhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHH
Q 001365 610 ---------GDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKE 680 (1092)
Q Consensus 610 ---------G~TpL~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~ 680 (1092)
+.++++..... ........ .+...-..+...+..|+||||.|+..+...
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~---------~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~------ 172 (282)
T 1oy3_D 115 QSQDCTPDTSHAPAAVDSQP-------NPENEEEP---------RDEDWRLQLEAENYDGHTPLHVAVIHKDAE------ 172 (282)
T ss_dssp ---------------------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHH------
T ss_pred cccccCcchhcchhhhcccc-------ccchhhhh---------hhhhhhhcCCCcCCCCcCHHHHHHHcCCHH------
Confidence 11111110000 00000000 000000112233578999999998876542
Q ss_pred HHHHHHHHhhhHHHHHHHHHhCCCCCCcccCC-CCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCH
Q 001365 681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHC-GQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRE 759 (1092)
Q Consensus 681 ~lL~~a~k~~l~~~LvklLle~GadvN~~D~~-G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~ 759 (1092)
++++|+++|++++..+.. |+||||+|+..|+.++|++||++|++++.+|..|+||||+|+..|+.
T Consensus 173 --------------~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~ 238 (282)
T 1oy3_D 173 --------------MVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNP 238 (282)
T ss_dssp --------------HHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCH
T ss_pred --------------HHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCc
Confidence 788899999999999865 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC
Q 001365 760 RTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIG 796 (1092)
Q Consensus 760 eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G 796 (1092)
++|++|+++||+++. +|..|.|||++|....
T Consensus 239 ~~v~~Ll~~ga~~~~------~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 239 ILARLLRAHGAPEPE------DGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHHHHHTTCCCCC------CC--------------
T ss_pred HHHHHHHHcCCCcCc------CCCcccccccccCCcc
Confidence 999999999999987 7899999999998764
No 39
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=6.6e-28 Score=252.97 Aligned_cols=190 Identities=22% Similarity=0.251 Sum_probs=161.9
Q ss_pred CCcccChHHHHHHHcCCcHHHHHHHHCCCCCCCCC-CCCCCchHHHHHHHcCCCchhHHHHHHHHhCC--CCcccccCCC
Q 001365 534 MSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTS-SQKVGRVPFYVTCSNRLSCSEVREFEYRASHI--PDVDVADNCG 610 (1092)
Q Consensus 534 ~~~~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~-~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~G--advna~D~~G 610 (1092)
.+..+.||||+||..|+.+++++|++.|++.+... .+..|.||||+||..|+ +..+++|+..| ++++..|..|
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~----~~~~~~Ll~~g~~~~~~~~~~~g 107 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGN----LEVVKSLYDRPLKPDLNKITNQG 107 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCC----HHHHHHHHSSSSCCCTTCCCTTC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCC----HHHHHHHHhCCCCcccccCCcCC
Confidence 35567899999999999999999999996655555 67889999999999985 45557888888 6777666555
Q ss_pred CcHHhhhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhh
Q 001365 611 DITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEK 690 (1092)
Q Consensus 611 ~TpL~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~ 690 (1092)
.|||| .|+..+...
T Consensus 108 ~t~L~--------------------------------------------------~A~~~~~~~---------------- 121 (228)
T 2dzn_A 108 VTCLH--------------------------------------------------LAVGKKWFE---------------- 121 (228)
T ss_dssp CCHHH--------------------------------------------------HHHHTTCHH----------------
T ss_pred CCHHH--------------------------------------------------HHHHcCCHh----------------
Confidence 55555 444333321
Q ss_pred hHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCC-CCccccCCCCccHHHHHHHcCCHHHHHHHH-Hc
Q 001365 691 LQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAG-VNINFRDVNGWTALHWAAYCGRERTVASLI-AL 768 (1092)
Q Consensus 691 l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~G-adin~~D~~G~TpLH~Aa~~G~~eiV~~LL-e~ 768 (1092)
++++|+++|++++.+|..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.++|++|+ ++
T Consensus 122 ----~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ 197 (228)
T 2dzn_A 122 ----VSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKY 197 (228)
T ss_dssp ----HHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred ----HHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhc
Confidence 778899999999999999999999999999999999999999 999999999999999999999999999999 89
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHH
Q 001365 769 GAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAE 806 (1092)
Q Consensus 769 GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe 806 (1092)
|++++. +|..|+||||+|+.. +++++|++
T Consensus 198 ga~~~~------~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 198 GAEYDL------VDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp CCCSCC------BCTTSCBGGGGCSST---THHHHHHT
T ss_pred CCCCCc------cCCCCCcHHHHHHHH---HHHHHHHh
Confidence 999887 779999999999765 67777775
No 40
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=3.9e-27 Score=247.97 Aligned_cols=202 Identities=17% Similarity=0.131 Sum_probs=175.5
Q ss_pred CCchHHHHHHHcCCCchhHHHHHHHHhCCC-CcccccCCCCcHHhh----hHHHHHHHHhc-CCCCCCCCCCCCchhhHH
Q 001365 572 VGRVPFYVTCSNRLSCSEVREFEYRASHIP-DVDVADNCGDITSEN----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQ 645 (1092)
Q Consensus 572 ~G~TPLHlAa~ng~~~seVv~fe~Ll~~Ga-dvna~D~~G~TpL~~----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ 645 (1092)
.+.||||.||..|. +..+++|+..+. .++..|..|.||||. ++.+++++|+. +++++..
T Consensus 5 ~~~~~l~~A~~~g~----~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----------- 69 (231)
T 3aji_A 5 VSNIMICNLAYSGK----LDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK----------- 69 (231)
T ss_dssp CSSSHHHHHHHHTC----HHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCC-----------
T ss_pred cccchHHHHHHhCC----HHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCc-----------
Confidence 47899999999986 444556665554 478889999999995 77788888754 6665443
Q ss_pred HHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCC
Q 001365 646 LNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGY 725 (1092)
Q Consensus 646 ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~ 725 (1092)
+..|+||||.|+..+... ++++|+++|++++.+|..|.||||+|+..|+
T Consensus 70 -----------~~~g~t~L~~A~~~~~~~--------------------~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 118 (231)
T 3aji_A 70 -----------DDAGWSPLHIAASAGXDE--------------------IVKALLVKGAHVNAVNQNGCTPLHYAASKNR 118 (231)
T ss_dssp -----------CTTSCCHHHHHHHHTCHH--------------------HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred -----------CCCCCCHHHHHHHcCHHH--------------------HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 257899999998866542 7888999999999999999999999999999
Q ss_pred HhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHH
Q 001365 726 DWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLA 805 (1092)
Q Consensus 726 ~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LL 805 (1092)
.+++++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|+
T Consensus 119 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll 192 (231)
T 3aji_A 119 HEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI------QDTEGNTPLHLACDEERVEEAKFLV 192 (231)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC------CCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc------cCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999887 7899999999999999999999999
Q ss_pred HcCCCCCcccCcccCCCCCcHHHHh
Q 001365 806 ESDLSSALSAISLNKKDGDVAEVTG 830 (1092)
Q Consensus 806 e~Ga~~h~adlnlkD~~G~ta~iaa 830 (1092)
++| ++++.+|..|.++...+
T Consensus 193 ~~g-----a~~~~~~~~g~t~l~~A 212 (231)
T 3aji_A 193 TQG-----ASIYIENKEEKTPLQVA 212 (231)
T ss_dssp HTT-----CCSCCCCTTSCCHHHHS
T ss_pred HCC-----CCCCCCCCCCCCHHHHH
Confidence 998 78999999997775443
No 41
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.95 E-value=5.2e-28 Score=264.61 Aligned_cols=227 Identities=18% Similarity=0.119 Sum_probs=190.5
Q ss_pred HHHHcCCcHHHHHHHHCCCCCCCCC-------CCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhh
Q 001365 544 WSCMFGEIEVPAEIVAGGVLRCHTS-------SQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN 616 (1092)
Q Consensus 544 ~A~~fG~veVv~~LL~~Gadin~~~-------~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~ 616 (1092)
.++..|..+.++.++..+..+.... .+..|.||||+||..|+ +..+++|+..|+++|..|..|.||||.
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~----~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 79 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGD----TEEVLRLLERGADINYANVDGLTALHQ 79 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTC----HHHHHHHHHHCCCTTCBCTTCCBHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCC----HHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 4567777888888887766543211 13457899999999986 555678999999999999999999995
Q ss_pred ----hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhh
Q 001365 617 ----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKL 691 (1092)
Q Consensus 617 ----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l 691 (1092)
++.+++++|+. |++++.. +..|+||||.|+..+...
T Consensus 80 A~~~g~~~~v~~Ll~~ga~~~~~----------------------~~~g~tpL~~A~~~g~~~----------------- 120 (299)
T 1s70_B 80 ACIDDNVDMVKFLVENGANINQP----------------------DNEGWIPLHAAASCGYLD----------------- 120 (299)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCC----------------------CTTSCCHHHHHHHHTCHH-----------------
T ss_pred HHHcCCHHHHHHHHHCCCCCCCC----------------------CCCCCcHHHHHHHcCCHH-----------------
Confidence 77888888754 6666543 257999999998876643
Q ss_pred HHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHH-CCCCccc--------------------------cCC
Q 001365 692 QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTV-AGVNINF--------------------------RDV 744 (1092)
Q Consensus 692 ~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~-~Gadin~--------------------------~D~ 744 (1092)
++++|+++|++++..|..|.||||+|+..|+.++++.|+. .|++++. .+.
T Consensus 121 ---~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 197 (299)
T 1s70_B 121 ---IAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAK 197 (299)
T ss_dssp ---HHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTT
T ss_pred ---HHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcC
Confidence 7889999999999999999999999999999999987775 3665543 567
Q ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCC
Q 001365 745 NGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGD 824 (1092)
Q Consensus 745 ~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ 824 (1092)
.|+||||+||..|+.++|++|+++|+++|. +|..|.||||+|+..|+.+++++|+++| ++++++|..|.
T Consensus 198 ~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~------~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-----ad~~~~d~~g~ 266 (299)
T 1s70_B 198 SGGTALHVAAAKGYTEVLKLLIQARYDVNI------KDYDGWTPLHAAAHWGKEEACRILVENL-----CDMEAVNKVGQ 266 (299)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHTTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSC
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHcCCCCCC------cCCCCCcHHHHHHhcCCHHHHHHHHHcC-----CCCCCcCCCCC
Confidence 899999999999999999999999999887 7899999999999999999999999998 78999999997
Q ss_pred cHH
Q 001365 825 VAE 827 (1092)
Q Consensus 825 ta~ 827 (1092)
||.
T Consensus 267 t~l 269 (299)
T 1s70_B 267 TAF 269 (299)
T ss_dssp CTT
T ss_pred CHH
Confidence 653
No 42
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.95 E-value=8.4e-28 Score=264.68 Aligned_cols=209 Identities=9% Similarity=-0.041 Sum_probs=176.2
Q ss_pred CCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhh----hHHHHHHH
Q 001365 549 GEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN----LRMQFGKL 624 (1092)
Q Consensus 549 G~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~----~~~~lvkL 624 (1092)
...++.++|...+ ++ ..|..|.||||+||..|+ +..+++|+..|++++..| |.||||. ++.+++++
T Consensus 11 ~~~~v~~lL~~~~--~~--~~d~~g~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~ 80 (285)
T 3kea_A 11 KSKQLKSFLSSKD--TF--KADVHGHSASYYAIADNN----VRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKI 80 (285)
T ss_dssp CHHHHHHHHHSTT--TT--CCCTTSCCHHHHHHHTTC----HHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHH
T ss_pred CHHHHHHHHHhCC--CC--ccCCCCCCHHHHHHHcCC----HHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHH
Confidence 3345556555543 33 667889999999999986 555578999999999884 9999995 77788887
Q ss_pred Hhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCC
Q 001365 625 LCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGG 703 (1092)
Q Consensus 625 Ll~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~G 703 (1092)
|+. |++++..+ ..|+||||.|+..+... ++++|+++|
T Consensus 81 Ll~~ga~~~~~d----------------------~~g~t~L~~A~~~g~~~--------------------~v~~Ll~~g 118 (285)
T 3kea_A 81 LLFSGLDDSQFD----------------------DKGNTALYYAVDSGNMQ--------------------TVKLFVKKN 118 (285)
T ss_dssp HHHTTCCTTCCC----------------------TTSCCHHHHHHHTTCHH--------------------HHHHHHHHC
T ss_pred HHHCCCCCCCcC----------------------CCCCcHHHHHHHcCCHH--------------------HHHHHHhcC
Confidence 754 77765432 57999999998876543 788899999
Q ss_pred CCCCcccCCC-CcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 001365 704 KGPCVLDHCG-QGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKY 782 (1092)
Q Consensus 704 advN~~D~~G-~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D 782 (1092)
++++.+|..| .||||+|+..|+.+++++|+++|+++... ..|+||||+|+..|+.++|++|+++|++++. +|
T Consensus 119 a~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~------~~ 191 (285)
T 3kea_A 119 WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNT------NN 191 (285)
T ss_dssp GGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCT------TC
T ss_pred CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCc------cc
Confidence 9999999999 79999999999999999999999987332 2899999999999999999999999999887 78
Q ss_pred CCCCCH-HHHHHHcCcHHHHHHHHHcCCCCCcccCcccCC
Q 001365 783 PSGRTP-ADLASSIGHKGIAGYLAESDLSSALSAISLNKK 821 (1092)
Q Consensus 783 ~~G~TP-LhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~ 821 (1092)
..|+|| ||+|+..|+.+++++|+++| ++++..|.
T Consensus 192 ~~g~t~~L~~A~~~~~~~~v~~Ll~~g-----ad~~~~~~ 226 (285)
T 3kea_A 192 SLLFIPDIKLAIDNKDIEMLQALFKYD-----INIYSANL 226 (285)
T ss_dssp CCBCCTTHHHHHHHTCHHHHHHHTTSC-----BCSTTTTG
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCh
Confidence 999998 99999999999999999998 67777763
No 43
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=7.4e-28 Score=258.83 Aligned_cols=210 Identities=12% Similarity=-0.019 Sum_probs=165.7
Q ss_pred ccChHHHHHHHcCCcHHHHHH----HHCCCCCCCCCC--CCCCchHHHHHH---HcCCCchhHHHHHHHHhCCCCccccc
Q 001365 537 QEAENCKWSCMFGEIEVPAEI----VAGGVLRCHTSS--QKVGRVPFYVTC---SNRLSCSEVREFEYRASHIPDVDVAD 607 (1092)
Q Consensus 537 ~~~TpLH~A~~fG~veVv~~L----L~~Gadin~~~~--d~~G~TPLHlAa---~ng~~~seVv~fe~Ll~~Gadvna~D 607 (1092)
.+.|+||.||..|+.++++.| ++.|++++.... +..|.||||+|+ ..|+ .+++ ++|+..|++.+...
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~--~~~v--~~Ll~~g~~~~~~~ 79 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGR--NDTI--PILLDIAEKTGNMR 79 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTB--CTHH--HHHHHHHHHTTCHH
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCC--HHHH--HHHHHhcccccchH
Confidence 357899999999999955544 459998774432 367999999999 4454 4444 67787776543220
Q ss_pred CCCCcHHhhhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHH
Q 001365 608 NCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLL 687 (1092)
Q Consensus 608 ~~G~TpL~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~ 687 (1092)
.++ .... ...+..|+||||.|+..++..
T Consensus 80 ---------------~~~--~~~~----------------------~~~d~~g~t~L~~A~~~g~~~------------- 107 (260)
T 3jxi_A 80 ---------------EFI--NSPF----------------------RDVYYRGQTALHIAIERRCKH------------- 107 (260)
T ss_dssp ---------------HHH--TCCB----------------------CCSSEESBCHHHHHHHTTCHH-------------
T ss_pred ---------------hhh--cccc----------------------cccccCCCCHHHHHHHcCCHH-------------
Confidence 011 0111 111247899999998876643
Q ss_pred HhhhHHHHHHHHHhCCCCCCccc--------------CCCCcHHHHHHHcCCHhHHHHHHH---CCCCccccCCCCccHH
Q 001365 688 KEKLQVWLVQKAAEGGKGPCVLD--------------HCGQGVLHFAAALGYDWALEPTTV---AGVNINFRDVNGWTAL 750 (1092)
Q Consensus 688 k~~l~~~LvklLle~GadvN~~D--------------~~G~TpLH~AA~~G~~~iVk~LL~---~Gadin~~D~~G~TpL 750 (1092)
++++|+++|+++|..| ..|+||||+||..|+.++|++||+ +|++++.+|..|+|||
T Consensus 108 -------~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpL 180 (260)
T 3jxi_A 108 -------YVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVL 180 (260)
T ss_dssp -------HHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHH
T ss_pred -------HHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHH
Confidence 7889999999999998 689999999999999999999999 9999999999999999
Q ss_pred HHHHHcCC---------HHHHHHHHHcCCCCCCCC-CCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 001365 751 HWAAYCGR---------ERTVASLIALGAAPGALS-DPTPKYPSGRTPADLASSIGHKGIAGYLAESDL 809 (1092)
Q Consensus 751 H~Aa~~G~---------~eiV~~LLe~GAdin~~~-D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga 809 (1092)
|+||..|+ .++|++|+++|++++... ..+.+|..|+||||+|+..|+.+++++|+++|.
T Consensus 181 h~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 249 (260)
T 3jxi_A 181 HALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREI 249 (260)
T ss_dssp HHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 99999888 799999999999984311 013488999999999999999999999999983
No 44
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=1.4e-26 Score=242.35 Aligned_cols=164 Identities=12% Similarity=-0.024 Sum_probs=141.6
Q ss_pred CCcccChHHHHHHHcCCcHHHHHHHHCCC-CCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCc
Q 001365 534 MSQQEAENCKWSCMFGEIEVPAEIVAGGV-LRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDI 612 (1092)
Q Consensus 534 ~~~~~~TpLH~A~~fG~veVv~~LL~~Ga-din~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~T 612 (1092)
.+..+.||||+||..|+.+++++|++.|. +++ ..+..|.||||+||..++ ...+++|+..|++++..|..|.|
T Consensus 54 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~--~~~~~g~t~L~~A~~~~~----~~~~~~Ll~~g~~~~~~~~~g~t 127 (223)
T 2f8y_A 54 QDNMGRTPLHAAVSADAQGVFQILIRNRATDLD--ARMHDGTTPLILAARLAV----EGMLEDLINSHADVNAVDDLGKS 127 (223)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTT--CCCTTCCCHHHHHHHHTC----HHHHHHHHHTTCCTTCBCTTSCB
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc--cCCCCCCcHHHHHHHhCc----HHHHHHHHHcCCCCcCcCCCCCc
Confidence 34567899999999999999999999987 544 567779999999999985 44557889999998888776666
Q ss_pred HHhhhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhH
Q 001365 613 TSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQ 692 (1092)
Q Consensus 613 pL~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~ 692 (1092)
||| .|+..+...
T Consensus 128 ~L~--------------------------------------------------~A~~~~~~~------------------ 139 (223)
T 2f8y_A 128 ALH--------------------------------------------------WAAAVNNVD------------------ 139 (223)
T ss_dssp HHH--------------------------------------------------HHHHTTCHH------------------
T ss_pred HHH--------------------------------------------------HHHHcCCHH------------------
Confidence 666 333322221
Q ss_pred HHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCC
Q 001365 693 VWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP 772 (1092)
Q Consensus 693 ~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdi 772 (1092)
++++|+++|++++.+|..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+..
T Consensus 140 --~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 140 --AAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVR 217 (223)
T ss_dssp --HHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSS
T ss_pred --HHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCc
Confidence 778889999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred C
Q 001365 773 G 773 (1092)
Q Consensus 773 n 773 (1092)
.
T Consensus 218 ~ 218 (223)
T 2f8y_A 218 S 218 (223)
T ss_dssp C
T ss_pred c
Confidence 3
No 45
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.94 E-value=3.6e-26 Score=239.96 Aligned_cols=207 Identities=16% Similarity=0.151 Sum_probs=179.8
Q ss_pred CCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhh----hHHHHHHHHhc-CCCCCCCCCCCCchh
Q 001365 568 SSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN----LRMQFGKLLCL-TSVSTPNYDPSNLSD 642 (1092)
Q Consensus 568 ~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~----~~~~lvkLLl~-gadv~~~~~~~~~~~ 642 (1092)
..+..|.||||.||..|. +..+++|++.|++++..+..|.||||. ++.+++++|+. +++.+...
T Consensus 4 ~~d~~~~~~l~~A~~~g~----~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~------- 72 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGI----YERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG------- 72 (240)
T ss_dssp CCSCGGGCCHHHHHHTTC----HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB-------
T ss_pred ccccccchHHHHHHHcCC----hHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhc-------
Confidence 346679999999999986 556688999999999999999999995 67788888755 55544332
Q ss_pred hHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHH
Q 001365 643 ISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAA 722 (1092)
Q Consensus 643 ~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~ 722 (1092)
+..+++||+.|+..+... ++++|++.|++++..|..|.||||+|+.
T Consensus 73 --------------~~~~~t~L~~A~~~~~~~--------------------~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 118 (240)
T 3eu9_A 73 --------------GDLNSTPLHWATRQGHLS--------------------MVVQLMKYGADPSLIDGEGCSCIHLAAQ 118 (240)
T ss_dssp --------------TTTTBCHHHHHHHHTCHH--------------------HHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred --------------CCcCCChhHHHHHcCCHH--------------------HHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 145889999988866542 7788999999999999999999999999
Q ss_pred cCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCC-HHHHHHHHHcCCCCCCCCCCCCCCC-CCCCHHHHHHHcCcHHH
Q 001365 723 LGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR-ERTVASLIALGAAPGALSDPTPKYP-SGRTPADLASSIGHKGI 800 (1092)
Q Consensus 723 ~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~-~eiV~~LLe~GAdin~~~D~n~~D~-~G~TPLhlAa~~G~~ei 800 (1092)
.|+.+++++|+++|++++.+|..|.||||+|+..++ .+++++|++.|++++. .+. .|.||||+|+..|+.++
T Consensus 119 ~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~------~~~~~g~t~L~~A~~~~~~~~ 192 (240)
T 3eu9_A 119 FGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNL------GDKYHKNTALHWAVLAGNTTV 192 (240)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTC------CCTTTCCCHHHHHHHHTCHHH
T ss_pred cCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcch------hhccCCCcHHHHHHHcCCHHH
Confidence 999999999999999999999999999999997776 8999999999999987 555 89999999999999999
Q ss_pred HHHHHHcCCCCCcccCcccCCCCCcHHHHh
Q 001365 801 AGYLAESDLSSALSAISLNKKDGDVAEVTG 830 (1092)
Q Consensus 801 v~~LLe~Ga~~h~adlnlkD~~G~ta~iaa 830 (1092)
+++|+++| ++++.+|..|.++...+
T Consensus 193 v~~Ll~~g-----~~~~~~~~~g~t~l~~A 217 (240)
T 3eu9_A 193 ISLLLEAG-----ANVDAQNIKGESALDLA 217 (240)
T ss_dssp HHHHHHHT-----CCTTCBCTTSCBHHHHH
T ss_pred HHHHHHcC-----CCCCCcCCCCCCHHHHH
Confidence 99999998 78999999997774433
No 46
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=9.1e-27 Score=255.49 Aligned_cols=195 Identities=15% Similarity=0.072 Sum_probs=166.5
Q ss_pred ChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCC-CcccccCCCCcHHhhh
Q 001365 539 AENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIP-DVDVADNCGDITSENL 617 (1092)
Q Consensus 539 ~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Ga-dvna~D~~G~TpL~~~ 617 (1092)
.+++|.|+..|+++.++.|+..+.+......|..|.||||+||..|+ +..+++|+..|+ +++..|..|.||||..
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~----~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a 152 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHAN----FPVVQQLLDSGVCKVDKQNRAGYSPIMLT 152 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTC----HHHHHHHHHTSCCCTTCCCTTSCCHHHHG
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCC----HHHHHHHHHCCCCcCCCCCCCCCCHHHHH
Confidence 45889999999999999998877663333677889999999999986 455578999998 8999998888888832
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHH
Q 001365 618 RMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQ 697 (1092)
Q Consensus 618 ~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~Lvk 697 (1092)
.. ...... . ...+++
T Consensus 153 ~~--------------------------------------------------~~~~~~-------------~--~~~~v~ 167 (276)
T 4hbd_A 153 AL--------------------------------------------------ATLKTQ-------------D--DIETVL 167 (276)
T ss_dssp GG--------------------------------------------------CCCCSH-------------H--HHHHHH
T ss_pred HH--------------------------------------------------HHhhhh-------------h--hHHHHH
Confidence 10 000000 0 011677
Q ss_pred HHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHH-cCCCCCCCC
Q 001365 698 KAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIA-LGAAPGALS 776 (1092)
Q Consensus 698 lLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe-~GAdin~~~ 776 (1092)
.|++.|.+++..|..|+||||+||..|+.++|++||++|+++|.+|..|+||||+||..|+.++|++||+ .|++++.
T Consensus 168 ~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~-- 245 (276)
T 4hbd_A 168 QLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISL-- 245 (276)
T ss_dssp HHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTC--
T ss_pred HHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcC--
Confidence 7888999999999999999999999999999999999999999999999999999999999999999999 8999888
Q ss_pred CCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 001365 777 DPTPKYPSGRTPADLASSIGHKGIAGYLAESD 808 (1092)
Q Consensus 777 D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 808 (1092)
+|..|+||||+|+..|+.+++++|++++
T Consensus 246 ----~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 246 ----TDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp ----CCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred ----cCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 7899999999999999999999999875
No 47
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=3.8e-26 Score=235.03 Aligned_cols=108 Identities=26% Similarity=0.310 Sum_probs=102.2
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 001365 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 774 (1092)
Q Consensus 695 LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~ 774 (1092)
++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++.
T Consensus 83 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 162 (192)
T 2rfm_A 83 IAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA 162 (192)
T ss_dssp HHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 56677788999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 001365 775 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 808 (1092)
Q Consensus 775 ~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 808 (1092)
+|..|.||||+|+..|+.+++++|++.|
T Consensus 163 ------~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 163 ------RDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp ------BCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred ------cCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 7799999999999999999999999875
No 48
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=9.8e-26 Score=227.88 Aligned_cols=157 Identities=24% Similarity=0.282 Sum_probs=137.1
Q ss_pred ccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhh
Q 001365 537 QEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN 616 (1092)
Q Consensus 537 ~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~ 616 (1092)
...++||+||..|+.+++++|++.|++++ ..+..|.||||+||..|+ +.
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~----~~------------------------- 61 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMANGADVN--AEDASGWTPLHLAAFNGH----LE------------------------- 61 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTC----HH-------------------------
T ss_pred cccchHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCCHHHHHHHcCC----HH-------------------------
Confidence 34678899999999999998888888866 556678888888887763 11
Q ss_pred hHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHH
Q 001365 617 LRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLV 696 (1092)
Q Consensus 617 ~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~Lv 696 (1092)
++
T Consensus 62 ------------------------------------------------------------------------------~v 63 (169)
T 2y1l_E 62 ------------------------------------------------------------------------------IV 63 (169)
T ss_dssp ------------------------------------------------------------------------------HH
T ss_pred ------------------------------------------------------------------------------HH
Confidence 34
Q ss_pred HHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 001365 697 QKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALS 776 (1092)
Q Consensus 697 klLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~ 776 (1092)
++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++.
T Consensus 64 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-- 141 (169)
T 2y1l_E 64 EVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNA-- 141 (169)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--
T ss_pred HHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--
Confidence 456667788888889999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 001365 777 DPTPKYPSGRTPADLASSIGHKGIAGYLAESD 808 (1092)
Q Consensus 777 D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 808 (1092)
+|..|.||||+|+..|+.+++++|++.|
T Consensus 142 ----~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 142 ----QDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp ----CCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred ----cCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 7789999999999999999999999876
No 49
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=5.8e-26 Score=226.31 Aligned_cols=109 Identities=27% Similarity=0.340 Sum_probs=100.9
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCC-C
Q 001365 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP-G 773 (1092)
Q Consensus 695 LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdi-n 773 (1092)
++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++. +
T Consensus 52 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 131 (162)
T 1ihb_A 52 IARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVG 131 (162)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCC
Confidence 556677788889999999999999999999999999999999999999999999999999999999999999999984 5
Q ss_pred CCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 001365 774 ALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDL 809 (1092)
Q Consensus 774 ~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga 809 (1092)
. +|..|.||||+|+..|+.+++++|+++|+
T Consensus 132 ~------~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 132 H------RNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp C------CCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred C------cCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 5 78999999999999999999999999984
No 50
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.94 E-value=3.8e-26 Score=230.60 Aligned_cols=121 Identities=26% Similarity=0.261 Sum_probs=102.7
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 001365 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 774 (1092)
Q Consensus 695 LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~ 774 (1092)
++++|+++|++++..|..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++.
T Consensus 51 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 130 (172)
T 3v30_A 51 TVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT 130 (172)
T ss_dssp HHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 44456666788888888999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcH
Q 001365 775 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA 826 (1092)
Q Consensus 775 ~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta 826 (1092)
+|..|.||||+|+..|+.+++++|+++| +++..++..|.+|
T Consensus 131 ------~~~~g~t~l~~A~~~~~~~~~~~L~~~~-----~~~~~~~~~~~~p 171 (172)
T 3v30_A 131 ------EADSGYTPMDLAVALGYRKVQQVIENHI-----LKLFQSNLVPADP 171 (172)
T ss_dssp ------CCTTSCCHHHHHHHHTCHHHHHHHHHHH-----HHHSCC-------
T ss_pred ------cCCCCCCHHHHHHHhCcHHHHHHHHHHH-----HHHhcccCCCCCC
Confidence 7789999999999999999999999988 5666666666554
No 51
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.93 E-value=1.4e-25 Score=225.45 Aligned_cols=108 Identities=26% Similarity=0.342 Sum_probs=99.9
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 001365 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 774 (1092)
Q Consensus 695 LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~ 774 (1092)
++++|+++|++++..|..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++.
T Consensus 51 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 130 (167)
T 3v31_A 51 VVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI 130 (167)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 44556677788888888999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 001365 775 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 808 (1092)
Q Consensus 775 ~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 808 (1092)
+|..|.||||+|+..|+.+++++|++++
T Consensus 131 ------~~~~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (167)
T 3v31_A 131 ------ETDSGYNSMDLAVALGYRSVQQVIESHL 158 (167)
T ss_dssp ------CCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred ------cCCCCCCHHHHHHHcCcHHHHHHHHHHH
Confidence 7789999999999999999999999977
No 52
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=2.2e-25 Score=227.13 Aligned_cols=168 Identities=17% Similarity=0.152 Sum_probs=140.5
Q ss_pred cccChHHHHHHHcCCcHHHHHHHHC-CCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHH
Q 001365 536 QQEAENCKWSCMFGEIEVPAEIVAG-GVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITS 614 (1092)
Q Consensus 536 ~~~~TpLH~A~~fG~veVv~~LL~~-Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL 614 (1092)
++..++||+||..|+.++++.|++. +.+++ ..+..|.||||+||..|+ +.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~--~~~~~g~t~L~~A~~~~~----~~----------------------- 53 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLN--QGDDHGFSPLHWACREGR----SA----------------------- 53 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTT--CCCTTSCCHHHHHHHTTC----HH-----------------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCccccc--ccCCCCCCHHHHHHHcCc----HH-----------------------
Confidence 4457789999999999999998887 44544 556678899998887763 11
Q ss_pred hhhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHH
Q 001365 615 ENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVW 694 (1092)
Q Consensus 615 ~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~ 694 (1092)
T Consensus 54 -------------------------------------------------------------------------------- 53 (179)
T 3f6q_A 54 -------------------------------------------------------------------------------- 53 (179)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 001365 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 774 (1092)
Q Consensus 695 LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~ 774 (1092)
++++|++.|++++.+|..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++.
T Consensus 54 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 133 (179)
T 3f6q_A 54 VVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI 133 (179)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch
Confidence 44556677888888888999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCC
Q 001365 775 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDG 823 (1092)
Q Consensus 775 ~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G 823 (1092)
+|..|.||||+|+..++.+++++|++.| ++++..+..+
T Consensus 134 ------~~~~g~tpl~~A~~~~~~~~~~~L~~~g-----~~~~~~~~~~ 171 (179)
T 3f6q_A 134 ------CNKYGEMPVDKAKAPLRELLRERAEKMG-----QNLNRIPYKD 171 (179)
T ss_dssp ------CCTTSCCGGGGSCHHHHHHHHHHHHHTT-----CCCSCBCCCC
T ss_pred ------hccCCCCcHHHHHHHHHHHHHHHHHHhh-----cCcccCCccc
Confidence 7899999999999999999999999998 5666665544
No 53
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.93 E-value=5.6e-25 Score=232.01 Aligned_cols=178 Identities=18% Similarity=0.121 Sum_probs=146.9
Q ss_pred CCchHHHHHHHcCCCchhHHHHHHHHhC-CCCcccccCCCCcHHhhhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHH
Q 001365 572 VGRVPFYVTCSNRLSCSEVREFEYRASH-IPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKI 650 (1092)
Q Consensus 572 ~G~TPLHlAa~ng~~~seVv~fe~Ll~~-Gadvna~D~~G~TpL~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I 650 (1092)
.|.||||+||..|+ +..+++|+.. |++++.+|..|.||||
T Consensus 2 ~g~t~L~~A~~~g~----~~~v~~Ll~~~g~~~~~~~~~g~t~L~----------------------------------- 42 (232)
T 2rfa_A 2 IWESPLLLAAKEND----VQALSKLLKFEGCEVHQRGAMGETALH----------------------------------- 42 (232)
T ss_dssp CTTCHHHHHHHTTC----HHHHHHHHTTTCSCTTCCCTTSCCHHH-----------------------------------
T ss_pred CCCCHHHHHHHcCC----HHHHHHHHHhcCCCcccCCCCCCCHHH-----------------------------------
Confidence 48999999999986 5555677876 8888888777776666
Q ss_pred hhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCC-----CcccCCCCcHHHHHHHcCC
Q 001365 651 SSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGP-----CVLDHCGQGVLHFAAALGY 725 (1092)
Q Consensus 651 ~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~Gadv-----N~~D~~G~TpLH~AA~~G~ 725 (1092)
.|+..+... ++++|++.|+++ +..|..|.||||+|+..|+
T Consensus 43 ---------------~A~~~g~~~--------------------~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~ 87 (232)
T 2rfa_A 43 ---------------IAALYDNLE--------------------AAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQN 87 (232)
T ss_dssp ---------------HHHHTTCHH--------------------HHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTC
T ss_pred ---------------HHHHcCCHH--------------------HHHHHHHcCchhccccccccCCCCcCHHHHHHHcCC
Confidence 333333221 566677777776 6778899999999999999
Q ss_pred HhHHHHHHHCCCCccccCC-------------CCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 001365 726 DWALEPTTVAGVNINFRDV-------------NGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLA 792 (1092)
Q Consensus 726 ~~iVk~LL~~Gadin~~D~-------------~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlA 792 (1092)
.++|++|+++|++++.++. .|+||||+||..|+.++|++|+++|++++. +|..|+||||+|
T Consensus 88 ~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~t~L~~A 161 (232)
T 2rfa_A 88 VNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA------QDSLGNTVLHIL 161 (232)
T ss_dssp HHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHH
T ss_pred HHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHH
Confidence 9999999999999999876 799999999999999999999999999887 789999999999
Q ss_pred HHcCcHHHH----HHHHHcCCCCCcccC-cccCCCCCcHHHH
Q 001365 793 SSIGHKGIA----GYLAESDLSSALSAI-SLNKKDGDVAEVT 829 (1092)
Q Consensus 793 a~~G~~eiv----~~LLe~Ga~~h~adl-nlkD~~G~ta~ia 829 (1092)
+..|+.+++ ++|+++|+......+ +.+|..|.|+...
T Consensus 162 ~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~ 203 (232)
T 2rfa_A 162 ILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKL 203 (232)
T ss_dssp HTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHH
T ss_pred HHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHH
Confidence 999999988 999999965433333 6889999776433
No 54
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=7.2e-25 Score=217.64 Aligned_cols=150 Identities=21% Similarity=0.231 Sum_probs=133.1
Q ss_pred ChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhhhH
Q 001365 539 AENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLR 618 (1092)
Q Consensus 539 ~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~~~ 618 (1092)
.|+||+||..|+.+++++|++.|++++ .+..|.||||+||..|+ +.
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~g~t~L~~A~~~~~----~~--------------------------- 48 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT---TDWLGTSPLHLAAQYGH----FS--------------------------- 48 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC---CCTTCCCHHHHHHHHTC----HH---------------------------
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC---cCCCCCCHHHHHHHcCC----HH---------------------------
Confidence 479999999999999999999998765 46679999999998764 11
Q ss_pred HHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHH
Q 001365 619 MQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQK 698 (1092)
Q Consensus 619 ~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~Lvkl 698 (1092)
++++
T Consensus 49 ----------------------------------------------------------------------------~v~~ 52 (153)
T 1awc_B 49 ----------------------------------------------------------------------------TTEV 52 (153)
T ss_dssp ----------------------------------------------------------------------------HHHH
T ss_pred ----------------------------------------------------------------------------HHHH
Confidence 3444
Q ss_pred HHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 001365 699 AAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDP 778 (1092)
Q Consensus 699 Lle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~ 778 (1092)
|++.|++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++.
T Consensus 53 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~---- 128 (153)
T 1awc_B 53 LLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT---- 128 (153)
T ss_dssp HHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC----
T ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc----
Confidence 5666778888888999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCHHHHHHHcCcHHHHHHH
Q 001365 779 TPKYPSGRTPADLASSIGHKGIAGYL 804 (1092)
Q Consensus 779 n~~D~~G~TPLhlAa~~G~~eiv~~L 804 (1092)
+|..|.||||+|+..|+.+++++|
T Consensus 129 --~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 129 --QSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp --CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred --cCCCCCCHHHHHHHcCCHHHHHHh
Confidence 778999999999999999999987
No 55
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.92 E-value=1e-25 Score=253.03 Aligned_cols=194 Identities=14% Similarity=0.002 Sum_probs=134.9
Q ss_pred hHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhhhHH
Q 001365 540 ENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRM 619 (1092)
Q Consensus 540 TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~~~~ 619 (1092)
+.+|+|+..+..++++.|++.|+++|. +.+..|+||||+||..|+ +..+++|++.|++++.+|..|.||||+.
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~-~~d~~g~TpLh~Aa~~g~----~~~v~~Ll~~Gad~n~~d~~g~TpLh~A-- 171 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNLNI-PVDEHGNTPLHWLTSIAN----LELVKHLVKHGSNRLYGDNMGESCLVKA-- 171 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCSCS-CCSTTCCCHHHHHHHTTC----HHHHHHHHHTTCCTTBCCTTCCCHHHHH--
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCccc-ccCCCCCcHHHHHHHcCC----HHHHHHHHHcCCCCCCcCCCCCCHHHHH--
Confidence 467899999999999999999999884 267789999999999986 4555789999999999988888888832
Q ss_pred HHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcC---CChHHHHHHHHHHHHHhhhHHHHH
Q 001365 620 QFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEK---FSSEEVKEKLVQKLLKEKLQVWLV 696 (1092)
Q Consensus 620 ~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~---~s~~~~~~~lL~~a~k~~l~~~Lv 696 (1092)
+..++ .. ++
T Consensus 172 ------------------------------------------------~~~g~~~~~~--------------------~~ 183 (327)
T 1sw6_A 172 ------------------------------------------------VKSVNNYDSG--------------------TF 183 (327)
T ss_dssp ------------------------------------------------HHSSHHHHTT--------------------CH
T ss_pred ------------------------------------------------HHhcccccHH--------------------HH
Confidence 11111 00 11
Q ss_pred HHHHhCC-CCCCcccCCCCcHHHHHHH----cCCHhHHHHHHHC--------------------CCCccccCCCCccHHH
Q 001365 697 QKAAEGG-KGPCVLDHCGQGVLHFAAA----LGYDWALEPTTVA--------------------GVNINFRDVNGWTALH 751 (1092)
Q Consensus 697 klLle~G-advN~~D~~G~TpLH~AA~----~G~~~iVk~LL~~--------------------Gadin~~D~~G~TpLH 751 (1092)
+.|++.+ ++++.+|..|+||||+||. .|+.+++++|++. |++++.+|..|+||||
T Consensus 184 ~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~ 263 (327)
T 1sw6_A 184 EALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSIL 263 (327)
T ss_dssp HHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHH
T ss_pred HHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhH
Confidence 2222222 4677888888888888888 7888888888876 7888888888888888
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcHH
Q 001365 752 WAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAE 827 (1092)
Q Consensus 752 ~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta~ 827 (1092)
+|+. |++|+++ ++|. +|..|+||||+|+..|+.++|++|+++| ++++++|..|.||.
T Consensus 264 ~a~~------~~~Ll~~--~~n~------~d~~G~TpLh~A~~~g~~~~v~~Ll~~G-----ad~~~~d~~G~TpL 320 (327)
T 1sw6_A 264 ENLD------LKWIIAN--MLNA------QDSNGDTCLNIAARLGNISIVDALLDYG-----ADPFIANKSGLRPV 320 (327)
T ss_dssp HHCS------HHHHHHH--TTTC------CCTTSCCHHHHHHHHCCHHHHHHHHHTT-----CCTTCCCTTSCCGG
T ss_pred HHHH------HHHHHHh--CCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCcccCCCCCCHH
Confidence 8875 7888877 3444 6788888888888888888888888877 67888888886654
No 56
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.92 E-value=4.9e-25 Score=220.95 Aligned_cols=108 Identities=29% Similarity=0.307 Sum_probs=98.6
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 001365 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 774 (1092)
Q Consensus 695 LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~ 774 (1092)
++++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++.
T Consensus 57 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 136 (165)
T 3twr_A 57 VVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTK 136 (165)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 45556777888888999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 001365 775 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDL 809 (1092)
Q Consensus 775 ~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga 809 (1092)
+|..|.||||+|+. |+.+++++|+++|+
T Consensus 137 ------~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 137 ------KNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp ------CCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred ------cCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 78999999999877 89999999999883
No 57
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.92 E-value=2e-25 Score=236.77 Aligned_cols=138 Identities=24% Similarity=0.272 Sum_probs=121.3
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCC------ccccCCCCccHHHHHHHcCCHHHHHHHHHc
Q 001365 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN------INFRDVNGWTALHWAAYCGRERTVASLIAL 768 (1092)
Q Consensus 695 LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gad------in~~D~~G~TpLH~Aa~~G~~eiV~~LLe~ 768 (1092)
++++|+++|++++.+|..|.||||+|+..|+.++|++|+++|++ ++..|..|+||||+||..|+.++|++|+++
T Consensus 60 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 139 (236)
T 1ikn_D 60 IAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL 139 (236)
T ss_dssp HHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 77889999999999999999999999999999999999999986 577889999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcHH-HHhh----hhhccccccCC
Q 001365 769 GAAPGALSDPTPKYP-SGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAE-VTGA----TAVQTVPQRCP 842 (1092)
Q Consensus 769 GAdin~~~D~n~~D~-~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta~-iaa~----~~v~~l~~~~a 842 (1092)
|++++. ++. .|.||||+|+..|+.+++++|+++| ++++.+|..|.++. ++.. ..++.|.+..+
T Consensus 140 g~~~~~------~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga 208 (236)
T 1ikn_D 140 GADVNA------QEPCNGRTALHLAVDLQNPDLVSLLLKCG-----ADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL 208 (236)
T ss_dssp TCCTTC------CCTTTCCCHHHHHHHTTCHHHHHHHHTTT-----CCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSC
T ss_pred CCCCCC------CCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCcccCCCCCHHHHHHccCchHHHHHHHHcch
Confidence 999987 666 9999999999999999999999998 78999999996663 3322 34445555554
Q ss_pred C
Q 001365 843 T 843 (1092)
Q Consensus 843 s 843 (1092)
.
T Consensus 209 ~ 209 (236)
T 1ikn_D 209 E 209 (236)
T ss_dssp G
T ss_pred h
Confidence 3
No 58
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.92 E-value=1.2e-24 Score=222.90 Aligned_cols=124 Identities=31% Similarity=0.375 Sum_probs=118.5
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 001365 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 774 (1092)
Q Consensus 695 LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~ 774 (1092)
+++.|+++|++||.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+||..|+.++|++||++|+++|.
T Consensus 19 ~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~ 98 (169)
T 4gpm_A 19 RVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNA 98 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcHHHH
Q 001365 775 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVT 829 (1092)
Q Consensus 775 ~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta~ia 829 (1092)
+|..|+||||+|+..|+.++|++|+++| ++++.+|..|.||...
T Consensus 99 ------~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~G~TpL~~ 142 (169)
T 4gpm_A 99 ------KDSDGRTPLHHAAENGHKEVVKLLISKG-----ADVNTSDSDGRTPLDL 142 (169)
T ss_dssp ------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHH
T ss_pred ------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccCCCCCCHHHH
Confidence 7899999999999999999999999998 7899999999776443
No 59
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.92 E-value=9.1e-25 Score=234.52 Aligned_cols=176 Identities=15% Similarity=0.059 Sum_probs=143.5
Q ss_pred CCchHHHHHHHcCCCchhHH--HHHHHHhCCCCccc----ccCCCCcHHhhhHHHHHHHHhcCCCCCCCCCCCCchhhHH
Q 001365 572 VGRVPFYVTCSNRLSCSEVR--EFEYRASHIPDVDV----ADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQ 645 (1092)
Q Consensus 572 ~G~TPLHlAa~ng~~~seVv--~fe~Ll~~Gadvna----~D~~G~TpL~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ 645 (1092)
.|+||||+||..|+ .+++ .+++|+..|++++. .|..|.||||
T Consensus 1 ~G~t~L~~A~~~g~--~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~------------------------------ 48 (256)
T 2etb_A 1 FDRDRLFSVVSRGV--PEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLM------------------------------ 48 (256)
T ss_dssp CCHHHHHHHHHHTC--GGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHH------------------------------
T ss_pred CCccHHHHHHHcCC--HHHHHHHHHHHHHcCCCcccccccCCCCCCCHHH------------------------------
Confidence 38999999999986 3322 45778888888887 5666666665
Q ss_pred HHHHHhhhhccCCCcchHHHHhhhh---cCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCC-----------cccC
Q 001365 646 LNSKISSLLKDENDDWDLMLKLTAE---EKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPC-----------VLDH 711 (1092)
Q Consensus 646 ll~~I~~Ll~~d~~g~t~L~~a~~~---~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN-----------~~D~ 711 (1092)
.|+.. +... ++++|++.|++++ ..|.
T Consensus 49 --------------------~A~~~~~~g~~~--------------------~v~~Ll~~g~~~~~~~~~~~~~~~~~d~ 88 (256)
T 2etb_A 49 --------------------KAVLNLQDGVNA--------------------CIMPLLQIDKDSGNPKPLVNAQCTDEFY 88 (256)
T ss_dssp --------------------HHHHTCBTTBCT--------------------THHHHHHHHHHTTCSSCGGGCCCCSTTT
T ss_pred --------------------HHHHccccchHH--------------------HHHHHHhcCCcccchhhhcccccccccc
Confidence 33333 3332 4555556565554 2447
Q ss_pred CCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCC-------------CccHHHHHHHcCCHHHHHHHHH---cCCCCCCC
Q 001365 712 CGQGVLHFAAALGYDWALEPTTVAGVNINFRDVN-------------GWTALHWAAYCGRERTVASLIA---LGAAPGAL 775 (1092)
Q Consensus 712 ~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~-------------G~TpLH~Aa~~G~~eiV~~LLe---~GAdin~~ 775 (1092)
.|.||||+||..|+.++|++|+++|++++.+|.. |+||||+||..|+.++|++|++ +|+++|.
T Consensus 89 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~- 167 (256)
T 2etb_A 89 QGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEA- 167 (256)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC-
T ss_pred cCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCc-
Confidence 8999999999999999999999999999999987 9999999999999999999999 9999887
Q ss_pred CCCCCCCCCCCCHHHHHHH--cCcHH-------HHHHHHHcCCCCCcccC-------cccCCCCCcHHHHh
Q 001365 776 SDPTPKYPSGRTPADLASS--IGHKG-------IAGYLAESDLSSALSAI-------SLNKKDGDVAEVTG 830 (1092)
Q Consensus 776 ~D~n~~D~~G~TPLhlAa~--~G~~e-------iv~~LLe~Ga~~h~adl-------nlkD~~G~ta~iaa 830 (1092)
+|..|+||||+|+. .++.+ ++++|+++| +++ +.+|..|.|+...+
T Consensus 168 -----~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g-----a~~~~~~~~~~~~d~~g~tpL~~A 228 (256)
T 2etb_A 168 -----TDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG-----ARLCPTVQLEEISNHQGLTPLKLA 228 (256)
T ss_dssp -----CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-----HHHSTTCCGGGCCCTTSCCHHHHH
T ss_pred -----cCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC-----CCcccccccccccCCCCCCHHHHH
Confidence 78999999999999 88888 999999998 677 89999997764433
No 60
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=2.8e-24 Score=213.09 Aligned_cols=106 Identities=25% Similarity=0.303 Sum_probs=98.8
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 001365 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 774 (1092)
Q Consensus 695 LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~ 774 (1092)
+++.|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+||..|+.++|++|+++ ++++.
T Consensus 50 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~ 128 (156)
T 1bd8_A 50 IALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHR 128 (156)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTC
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCC
Confidence 45567778889999999999999999999999999999999999999999999999999999999999999998 87776
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHc
Q 001365 775 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAES 807 (1092)
Q Consensus 775 ~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~ 807 (1092)
+|..|.||||+|+..|+.+++++|+++
T Consensus 129 ------~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 129 ------RDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp ------CCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred ------cCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 789999999999999999999999974
No 61
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.92 E-value=1.3e-25 Score=252.26 Aligned_cols=192 Identities=17% Similarity=0.173 Sum_probs=131.7
Q ss_pred CCcccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCC-CCcccccCCCCc
Q 001365 534 MSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHI-PDVDVADNCGDI 612 (1092)
Q Consensus 534 ~~~~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~G-advna~D~~G~T 612 (1092)
.+..+.||||+||..|+.++|++||+.|++++ ..+..|+||||+||.+|+ +..+..++.|+..+ ++++.+|..|.|
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n--~~d~~g~TpLh~A~~~g~-~~~~~~~~~ll~~~~~~~~~~d~~g~t 203 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRL--YGDNMGESCLVKAVKSVN-NYDSGTFEALLDYLYPCLILEDSMNRT 203 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--BCCTTCCCHHHHHHHSSH-HHHTTCHHHHHHHHGGGGGEECTTCCC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC--CcCCCCCCHHHHHHHhcc-cccHHHHHHHHHhhhccccCCCCCCCC
Confidence 45678999999999999999999999999987 667789999999999873 11112223445554 679999999999
Q ss_pred HHhhh--------HHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHH
Q 001365 613 TSENL--------RMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQ 684 (1092)
Q Consensus 613 pL~~~--------~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~ 684 (1092)
|||+. +.+++++|+... ..++. . .....
T Consensus 204 pLh~A~~~~~~~g~~~~v~~Ll~~~---------------------~~~~~----------~---~~~~~---------- 239 (327)
T 1sw6_A 204 ILHHIIITSGMTGCSAAAKYYLDIL---------------------MGWIV----------K---KQNRP---------- 239 (327)
T ss_dssp HHHHHHHHHTSTTCHHHHHHHHHHH---------------------HHHHH----------H---GGGCC----------
T ss_pred HHHHHHHHccccccHHHHHHHHHHH---------------------HHHHh----------c---ccchH----------
Confidence 99953 334444433200 00000 0 00000
Q ss_pred HHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHH
Q 001365 685 KLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVAS 764 (1092)
Q Consensus 685 ~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~ 764 (1092)
+...+...|+++|.+|..|.||||+|+. +++|+++ ++|.+|..|+||||+||..|+.++|++
T Consensus 240 ----------i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~ 301 (327)
T 1sw6_A 240 ----------IQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDA 301 (327)
T ss_dssp ----------EEEC----------------CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHH
T ss_pred ----------HHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 1112345589999999999999999995 9999998 688999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC
Q 001365 765 LIALGAAPGALSDPTPKYPSGRTPADLASSIG 796 (1092)
Q Consensus 765 LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G 796 (1092)
||++||++++ +|..|+||||+|+.+|
T Consensus 302 Ll~~Gad~~~------~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 302 LLDYGADPFI------ANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHTTCCTTC------CCTTSCCGGGGTCC--
T ss_pred HHHcCCCCcc------cCCCCCCHHHHHHhcC
Confidence 9999999988 7899999999998765
No 62
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.91 E-value=1.2e-23 Score=216.50 Aligned_cols=173 Identities=17% Similarity=0.120 Sum_probs=146.1
Q ss_pred CCCchHHHHHHHcCCCchhHHHHHHHHhCCC-CcccccCCCCcHHhhhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHH
Q 001365 571 KVGRVPFYVTCSNRLSCSEVREFEYRASHIP-DVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSK 649 (1092)
Q Consensus 571 ~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Ga-dvna~D~~G~TpL~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~ 649 (1092)
..|.||||.||..|. +..+++|+..+. +++..|..|.||||
T Consensus 3 ~~~~~~L~~A~~~g~----~~~v~~ll~~~~~~~~~~~~~g~t~L~---------------------------------- 44 (201)
T 3hra_A 3 TYEVGALLEAANQRD----TKKVKEILQDTTYQVDEVDTEGNTPLN---------------------------------- 44 (201)
T ss_dssp CCCTTHHHHHHHTTC----HHHHHHHHTCTTCCTTCCCTTSCCHHH----------------------------------
T ss_pred cccccHHHHHHHhcc----HHHHHHHHHcCCCCCCCCCCCCCCHHH----------------------------------
Confidence 458999999999985 344445555554 77776655555554
Q ss_pred HhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHH
Q 001365 650 ISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWAL 729 (1092)
Q Consensus 650 I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iV 729 (1092)
.|+..+... ++++|+++|++++..|..|.||||+|+..|+.+++
T Consensus 45 ----------------~A~~~~~~~--------------------~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 88 (201)
T 3hra_A 45 ----------------IAVHNNDIE--------------------IAKALIDRGADINLQNSISDSPYLYAGAQGRTEIL 88 (201)
T ss_dssp ----------------HHHHHTCHH--------------------HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred ----------------HHHHcCCHH--------------------HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 444433321 78889999999999999999999999999999999
Q ss_pred HHHH-HCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCHHHHHHHcCc-----HHHHH
Q 001365 730 EPTT-VAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG-AAPGALSDPTPKYPSGRTPADLASSIGH-----KGIAG 802 (1092)
Q Consensus 730 k~LL-~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~G-Adin~~~D~n~~D~~G~TPLhlAa~~G~-----~eiv~ 802 (1092)
++|+ ..+++++.+|..|+||||+|+..|+.++|++|+++| ++++. +|..|+||||+|+..+. .++++
T Consensus 89 ~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~------~~~~g~t~L~~A~~~~~~~~~~~~~v~ 162 (201)
T 3hra_A 89 AYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDF------QNDFGYTALIEAVGLREGNQLYQDIVK 162 (201)
T ss_dssp HHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTC------CCTTSCCHHHHHHHSSCCSHHHHHHHH
T ss_pred HHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCC------CCCCCCCHHHHHHHhccchhhHHHHHH
Confidence 9999 678899999999999999999999999999999999 88877 78999999999999987 99999
Q ss_pred HHHHcCCCCCcccCcccCCCCCcHHH
Q 001365 803 YLAESDLSSALSAISLNKKDGDVAEV 828 (1092)
Q Consensus 803 ~LLe~Ga~~h~adlnlkD~~G~ta~i 828 (1092)
+|+++| ++++.+|..|.|+..
T Consensus 163 ~Ll~~g-----a~~~~~~~~g~t~l~ 183 (201)
T 3hra_A 163 LLMENG-----ADQSIKDNSGRTAMD 183 (201)
T ss_dssp HHHHTT-----CCTTCCCTTSCCHHH
T ss_pred HHHHCC-----CCCCccCCCCCCHHH
Confidence 999998 789999999977643
No 63
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.91 E-value=2.3e-24 Score=233.87 Aligned_cols=191 Identities=13% Similarity=0.073 Sum_probs=147.0
Q ss_pred CCcccChHHHHHHHc---CCcHHHHHHHHCCCCC-------C--CCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCC
Q 001365 534 MSQQEAENCKWSCMF---GEIEVPAEIVAGGVLR-------C--HTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIP 601 (1092)
Q Consensus 534 ~~~~~~TpLH~A~~f---G~veVv~~LL~~Gadi-------n--~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Ga 601 (1092)
.+..+.||||+||.+ |+.+++++||+.|++. + ....+..|.||||+||..|+ +..+++|++.|+
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~----~~~v~~Ll~~ga 125 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRN----MTLVTLLVENGA 125 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTC----HHHHHHHHHTTC
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCC----HHHHHHHHHCCC
Confidence 355688999999998 9999999999998642 2 22345689999999999986 445578999999
Q ss_pred CcccccCCCCcHHhhhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHH
Q 001365 602 DVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEK 681 (1092)
Q Consensus 602 dvna~D~~G~TpL~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~ 681 (1092)
+++..+..+.. ...+. ...+..|+||||.|+..+...
T Consensus 126 ~~~~~~~~~~~--------------~~~~~----------------------~~~~~~g~tpL~~A~~~g~~~------- 162 (273)
T 2pnn_A 126 DVQAAANGDFF--------------KKTKG----------------------RPGFYFGELPLSLAACTNQLA------- 162 (273)
T ss_dssp CTTCCBCSGGG--------------SSCSS----------------------SCCCCSCBSHHHHHHHTTCHH-------
T ss_pred CcCcccccccc--------------ccccc----------------------cccccCCCCHHHHHHHcCCHH-------
Confidence 99998765410 00000 112357999999998876543
Q ss_pred HHHHHHHhhhHHHHHHHHHh---CCCCCCcccCCCCcHHHHHHHcCC---------HhHHHHHHHCCCCcc-------cc
Q 001365 682 LVQKLLKEKLQVWLVQKAAE---GGKGPCVLDHCGQGVLHFAAALGY---------DWALEPTTVAGVNIN-------FR 742 (1092)
Q Consensus 682 lL~~a~k~~l~~~LvklLle---~GadvN~~D~~G~TpLH~AA~~G~---------~~iVk~LL~~Gadin-------~~ 742 (1092)
++++|++ +|+++|.+|..|+||||+||..|+ .++|++|+++|+++| .+
T Consensus 163 -------------~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~ 229 (273)
T 2pnn_A 163 -------------IVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEIT 229 (273)
T ss_dssp -------------HHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCC
T ss_pred -------------HHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccccccccccc
Confidence 7889999 999999999999999999999998 899999999999997 48
Q ss_pred CCCCccHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCCCCCCCCHHH
Q 001365 743 DVNGWTALHWAAYCGRERTVASLIALGA-APGALSDPTPKYPSGRTPAD 790 (1092)
Q Consensus 743 D~~G~TpLH~Aa~~G~~eiV~~LLe~GA-din~~~D~n~~D~~G~TPLh 790 (1092)
|..|+||||+|+..|+.++|++||++|| |+.. ....+.+|-|
T Consensus 230 d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~------~~~~~~~~~~ 272 (273)
T 2pnn_A 230 NRKGLTPLALAASSGKIGVLAYILQREIHEPEC------RHAAAHHHHH 272 (273)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHHTC--------------------
T ss_pred CCCCCCHHHHHHHhChHHHHHHHHHCCCCCchh------hhhhhhhccC
Confidence 9999999999999999999999999999 5544 5566666543
No 64
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.90 E-value=1.2e-24 Score=232.89 Aligned_cols=116 Identities=29% Similarity=0.322 Sum_probs=105.5
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 001365 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 774 (1092)
Q Consensus 695 LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~ 774 (1092)
+++.|++.|+++|.+|..|+||||+||..|+.++|++||++|+++|.+|..|+||||+||..|+.++|++|+++|++++.
T Consensus 52 ~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 131 (239)
T 1ycs_B 52 LVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFA 131 (239)
T ss_dssp HHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcce
Confidence 55667788889999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCC-CHHHHH--HHcCcHHHHHHHHHcCCCCCcccCcccCC
Q 001365 775 LSDPTPKYPSGR-TPADLA--SSIGHKGIAGYLAESDLSSALSAISLNKK 821 (1092)
Q Consensus 775 ~~D~n~~D~~G~-TPLhlA--a~~G~~eiv~~LLe~Ga~~h~adlnlkD~ 821 (1092)
+|..|. ||||+| +..|+.+++++|+++| +++++.+.
T Consensus 132 ------~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~-----a~~~~~~~ 170 (239)
T 1ycs_B 132 ------MTYSDMQTAADKCEEMEEGYTQCSQFLYGVQ-----EKMGIMNK 170 (239)
T ss_dssp ------CCSSSCCCHHHHCCSSSTTCCCHHHHHHHHH-----HHTTTTGG
T ss_pred ------ecCCCCcchHHHHHHhhhccHHHHHHHHHhh-----hccccccc
Confidence 566666 999999 8889999999999988 56666544
No 65
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.90 E-value=1.9e-23 Score=224.51 Aligned_cols=116 Identities=18% Similarity=0.095 Sum_probs=104.4
Q ss_pred CCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccC--------------CCCccHHHHHHHcCCHHHHHHHHH--
Q 001365 704 KGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRD--------------VNGWTALHWAAYCGRERTVASLIA-- 767 (1092)
Q Consensus 704 advN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D--------------~~G~TpLH~Aa~~G~~eiV~~LLe-- 767 (1092)
.+++..|..|+||||+||..|+.++|++||++|++++.+| ..|+||||+||..|+.++|++|++
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 4456667799999999999999999999999999999999 689999999999999999999999
Q ss_pred -cCCCCCCCCCCCCCCCCCCCHHHHHHHcCc---------HHHHHHHHHcCCCCCcccC-------cccCCCCCcHHHHh
Q 001365 768 -LGAAPGALSDPTPKYPSGRTPADLASSIGH---------KGIAGYLAESDLSSALSAI-------SLNKKDGDVAEVTG 830 (1092)
Q Consensus 768 -~GAdin~~~D~n~~D~~G~TPLhlAa~~G~---------~eiv~~LLe~Ga~~h~adl-------nlkD~~G~ta~iaa 830 (1092)
+|++++. +|..|+||||+|+..|+ .+++++|+++| +++ +++|..|.|+...+
T Consensus 164 ~~ga~~~~------~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-----a~~~~~~~~~~~~d~~g~tpL~~A 232 (260)
T 3jxi_A 164 HKQADLRR------QDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKC-----AKLFPDTNLEALLNNDGLSPLMMA 232 (260)
T ss_dssp SCCCCTTC------CCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHH-----HHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred ccCCCCcc------cCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhC-----cccccccchhhcccCCCCCHHHHH
Confidence 8999887 78999999999999887 79999999998 566 78999997764433
No 66
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=3.5e-24 Score=222.76 Aligned_cols=108 Identities=8% Similarity=-0.156 Sum_probs=86.1
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCC------HhHHHHHHHCCCCccccCCCCc-cHHHHHHHcC-----CHHHH
Q 001365 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGY------DWALEPTTVAGVNINFRDVNGW-TALHWAAYCG-----RERTV 762 (1092)
Q Consensus 695 LvklLle~GadvN~~D~~G~TpLH~AA~~G~------~~iVk~LL~~Gadin~~D~~G~-TpLH~Aa~~G-----~~eiV 762 (1092)
++++|+++|++||.+|..|+||||+|+..|+ .++|++||++|+++|.+|..|+ ||||+|+..| +.++|
T Consensus 57 iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv 136 (186)
T 3t8k_A 57 ISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLY 136 (186)
T ss_dssp HHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHH
Confidence 5566777788888888888888888888776 4678888888888888888888 8888888844 34688
Q ss_pred HHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 001365 763 ASLIA-LGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 808 (1092)
Q Consensus 763 ~~LLe-~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 808 (1092)
++||+ +|+++++ +|..|+||||+|+..|+.++|++|++..
T Consensus 137 ~~Ll~~~gad~~~------~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 137 KLIFSQSGLQLLI------KDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp HHHHTSTTCCTTC------CCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHhcCCCCcc------cCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 88888 8888777 7788888888888888888888888755
No 67
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.89 E-value=3.2e-24 Score=229.63 Aligned_cols=191 Identities=11% Similarity=-0.021 Sum_probs=130.1
Q ss_pred ccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhh
Q 001365 537 QEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN 616 (1092)
Q Consensus 537 ~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~ 616 (1092)
.+.||||.|+..|+.++++.||++|++++.. ..|.||||+||..|+ +..+++|+..|+++|..|..|.||||
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~---~~~~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~d~~g~t~L~- 75 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKFN---PLPLALLLDSSLEGE----FDLVQRIIYEVDDPSLPNDEGITALH- 75 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTC----HHHHHHHTSTTSSCCCCCTTSCCHHH-
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCcccC---chhhHHHHHHHHcCC----HHHHHHHHHcCCCCCCcCCCCCCHHH-
Confidence 4689999999999999999999999998854 348999999999986 55557889999999988777776666
Q ss_pred hHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHH
Q 001365 617 LRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLV 696 (1092)
Q Consensus 617 ~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~Lv 696 (1092)
.|+..++.. ++
T Consensus 76 -------------------------------------------------~A~~~g~~~--------------------~v 86 (239)
T 1ycs_B 76 -------------------------------------------------NAVCAGHTE--------------------IV 86 (239)
T ss_dssp -------------------------------------------------HHHHHTCHH--------------------HH
T ss_pred -------------------------------------------------HHHHcCCHH--------------------HH
Confidence 333333221 77
Q ss_pred HHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCc-cHHHHH--HHcCCHHHHHHHHHcCCCCC
Q 001365 697 QKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGW-TALHWA--AYCGRERTVASLIALGAAPG 773 (1092)
Q Consensus 697 klLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~-TpLH~A--a~~G~~eiV~~LLe~GAdin 773 (1092)
++|+++|+++|.+|..|+||||+||..|+.++|++|+++|++++.+|..|. ||||+| +..|+.++|++|+++|++++
T Consensus 87 ~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 87 KFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMG 166 (239)
T ss_dssp HHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTT
T ss_pred HHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccc
Confidence 888999999999999999999999999999999999999999999998887 999999 88999999999999999998
Q ss_pred CCCC---CCCCCCCCCCHHHHHHHcCcHHHHHHHHH
Q 001365 774 ALSD---PTPKYPSGRTPADLASSIGHKGIAGYLAE 806 (1092)
Q Consensus 774 ~~~D---~n~~D~~G~TPLhlAa~~G~~eiv~~LLe 806 (1092)
..+. ....+..|.||+++|...|. ++.+|.+
T Consensus 167 ~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~ 200 (239)
T 1ycs_B 167 IMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHR 200 (239)
T ss_dssp TTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCC
T ss_pred ccccceEEEEeccCCCCCCcccccCCC--EEEEEEe
Confidence 7431 11236789999999988775 4444444
No 68
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.88 E-value=1.3e-22 Score=208.48 Aligned_cols=144 Identities=23% Similarity=0.190 Sum_probs=133.2
Q ss_pred cCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHC
Q 001365 656 DENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA 735 (1092)
Q Consensus 656 ~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~ 735 (1092)
.+..|+||||.|+..+... +++.|++.|++++..|..|+||||+|+..|+.++|++|+++
T Consensus 31 ~d~~g~t~L~~A~~~g~~~--------------------~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 90 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMEN--------------------AIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSK 90 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGG--------------------GHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHH--------------------HHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHC
Confidence 3578999999999887765 67788889999999999999999999999999999999999
Q ss_pred CCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccc
Q 001365 736 GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSA 815 (1092)
Q Consensus 736 Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~ad 815 (1092)
|++++.+|..|+||||+|+..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++
T Consensus 91 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~ 159 (192)
T 2rfm_A 91 GSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVND------RNLEGETPLIVASKYGRSEIVKKLLELG-----AD 159 (192)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC------CCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CC
T ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CC
Confidence 999999999999999999999999999999999999887 7899999999999999999999999998 78
Q ss_pred CcccCCCCCcHHHHh
Q 001365 816 ISLNKKDGDVAEVTG 830 (1092)
Q Consensus 816 lnlkD~~G~ta~iaa 830 (1092)
++.+|..|.++...+
T Consensus 160 ~~~~~~~g~t~l~~A 174 (192)
T 2rfm_A 160 ISARDLTGLTAEASA 174 (192)
T ss_dssp TTCBCTTSCBHHHHH
T ss_pred CCCcCCCCCCHHHHH
Confidence 999999997774433
No 69
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.88 E-value=8.2e-26 Score=241.87 Aligned_cols=187 Identities=11% Similarity=-0.045 Sum_probs=155.1
Q ss_pred cccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHh
Q 001365 536 QQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE 615 (1092)
Q Consensus 536 ~~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~ 615 (1092)
..+.||||+||..|+.+++++|++.|++++ ..+..|+||||+||..|+ +..+++|++.|+++|.+|..|.||||
T Consensus 19 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~d~~g~tpLh~A~~~g~----~~~v~~Ll~~ga~~n~~d~~g~tpLh 92 (229)
T 2vge_A 19 LNPLVLLLDAALTGELEVVQQAVKEMNDPS--QPNEEGITALHNAICGAN----YSIVDFLITAGANVNSPDSHGWTPLH 92 (229)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHHHSSCTT--CCCTTSCCHHHHHHHTTC----HHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred cchhHHHHHHHHcCCHHHHHHHHhcCCCCC--CCCCCCCCHHHHHHHcCC----HHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 446789999999999999999999999877 567779999999999985 44457889999999988777766666
Q ss_pred hhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHH
Q 001365 616 NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWL 695 (1092)
Q Consensus 616 ~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~L 695 (1092)
.|+..+... +
T Consensus 93 --------------------------------------------------~A~~~g~~~--------------------~ 102 (229)
T 2vge_A 93 --------------------------------------------------CAASCNDTV--------------------I 102 (229)
T ss_dssp --------------------------------------------------HHHHTTCHH--------------------H
T ss_pred --------------------------------------------------HHHHcCCHH--------------------H
Confidence 333333221 7
Q ss_pred HHHHHhCCCCCCccc-CCCCcHHHHH--HHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCC
Q 001365 696 VQKAAEGGKGPCVLD-HCGQGVLHFA--AALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP 772 (1092)
Q Consensus 696 vklLle~GadvN~~D-~~G~TpLH~A--A~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdi 772 (1092)
+++|++.|++++..+ ..|+||||+| +..|+.+++++|+++|++++.+|..|.||||.++..+ .+++|++.|+++
T Consensus 103 v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~---~~~~ll~~ga~~ 179 (229)
T 2vge_A 103 CMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEF---GDELSFREGESV 179 (229)
T ss_dssp HHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSS---TTBCCBCTTCEE
T ss_pred HHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhcc---ccccCccccccc
Confidence 788999999999987 6999999999 9999999999999999999999999999999765554 336788899985
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHH
Q 001365 773 GALSDPTPKYPSGRTPADLASSIGHKGIAGYLA 805 (1092)
Q Consensus 773 n~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LL 805 (1092)
++ +.+|..|+||||+|+..|+.++|+.++
T Consensus 180 ~~----~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 180 TV----LRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp EE----EESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred cc----cccCCCcccHHHHHHHcCCcceeehhh
Confidence 43 338899999999999999999887644
No 70
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.88 E-value=3.6e-23 Score=206.58 Aligned_cols=139 Identities=24% Similarity=0.264 Sum_probs=117.0
Q ss_pred CCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCC
Q 001365 657 ENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAG 736 (1092)
Q Consensus 657 d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~G 736 (1092)
+..+.++||.|+..+... +++.|+++|+++|.+|..|+||||+|+ .|+.++|++|+++|
T Consensus 9 ~~~~~t~L~~A~~~g~~~--------------------~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g 67 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVE--------------------EVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHG 67 (156)
T ss_dssp -CCSTTHHHHHHHHTCHH--------------------HHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTT
T ss_pred CccchHHHHHHHHcCCHH--------------------HHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcC
Confidence 367889999998877653 788899999999999999999999986 99999999999999
Q ss_pred CCccccCCCCcc-HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccc
Q 001365 737 VNINFRDVNGWT-ALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSA 815 (1092)
Q Consensus 737 adin~~D~~G~T-pLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~ad 815 (1092)
++++.+|..|+| |||+||..|+.++|++|+++|++++. +|..|+||||+|+..|+.+++++|+++| ++
T Consensus 68 ~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~~~~v~~Ll~~g-----a~ 136 (156)
T 1bi7_B 68 AEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDV------RDAWGRLPVDLAEELGHRDVARYLRAAA-----GG 136 (156)
T ss_dssp CCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSC------CCTTCCCHHHHHHHHTCHHHHHHHSSCC-------
T ss_pred CCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHhCHHHHHHHHHHcC-----CC
Confidence 999999999999 99999999999999999999999887 7799999999999999999999999998 78
Q ss_pred CcccCCCCCcHH
Q 001365 816 ISLNKKDGDVAE 827 (1092)
Q Consensus 816 lnlkD~~G~ta~ 827 (1092)
++.+|..|.++.
T Consensus 137 ~~~~~~~g~t~~ 148 (156)
T 1bi7_B 137 TRGSNHARIDAA 148 (156)
T ss_dssp ------------
T ss_pred CCccCcCcCccc
Confidence 999999887653
No 71
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.88 E-value=1.3e-22 Score=222.47 Aligned_cols=164 Identities=15% Similarity=0.115 Sum_probs=134.8
Q ss_pred CCcccChHHHHHHHcCCcHHHHHHHHCCC-CCCCCCCCCCCchHHHHHHHcCC-CchhHHHHHHHHhCCCCcccccCCCC
Q 001365 534 MSQQEAENCKWSCMFGEIEVPAEIVAGGV-LRCHTSSQKVGRVPFYVTCSNRL-SCSEVREFEYRASHIPDVDVADNCGD 611 (1092)
Q Consensus 534 ~~~~~~TpLH~A~~fG~veVv~~LL~~Ga-din~~~~d~~G~TPLHlAa~ng~-~~seVv~fe~Ll~~Gadvna~D~~G~ 611 (1092)
.+..+.||||+||..|+.+++++||+.|+ +++ ..+..|.||||+||.... ....+..+++|+..|.+++..|.
T Consensus 107 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~--~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~--- 181 (276)
T 4hbd_A 107 ADSNGNTALHYSVSHANFPVVQQLLDSGVCKVD--KQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQ--- 181 (276)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTT--CCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTT---
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCC--CCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCC---
Confidence 45678999999999999999999999998 766 667779999999995421 01334445566666655544443
Q ss_pred cHHhhhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhh
Q 001365 612 ITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKL 691 (1092)
Q Consensus 612 TpL~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l 691 (1092)
.|+||||.|+..+...
T Consensus 182 -----------------------------------------------~g~tpLh~A~~~g~~~----------------- 197 (276)
T 4hbd_A 182 -----------------------------------------------AGQTALMLAVSHGRVD----------------- 197 (276)
T ss_dssp -----------------------------------------------TCCCHHHHHHHTTCHH-----------------
T ss_pred -----------------------------------------------CCCCHHHHHHHcCCHH-----------------
Confidence 4556666666554432
Q ss_pred HHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHH-CCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcC
Q 001365 692 QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTV-AGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769 (1092)
Q Consensus 692 ~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~-~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~G 769 (1092)
++++|+++|+++|.+|..|+||||+||..|+.++|++||+ .|++++.+|..|+||||+|+..|+.++|++|++++
T Consensus 198 ---~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 198 ---VVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp ---HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred ---HHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 7888999999999999999999999999999999999999 89999999999999999999999999999999875
No 72
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.88 E-value=2.9e-22 Score=201.10 Aligned_cols=140 Identities=20% Similarity=0.083 Sum_probs=128.8
Q ss_pred CcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCC
Q 001365 659 DDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN 738 (1092)
Q Consensus 659 ~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gad 738 (1092)
.|.||||.|+..+... +++.|++.|+++|.+|..|.||||+|+..|+.++|++|+++|++
T Consensus 2 ~~~t~L~~A~~~g~~~--------------------~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 61 (167)
T 3v31_A 2 ANSLSVHQLAAQGEML--------------------YLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61 (167)
T ss_dssp TTCCCHHHHHHTTCHH--------------------HHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCcchHHHHHHCCCHH--------------------HHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 5678888888877643 77788899999999999999999999999999999999999999
Q ss_pred ccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcc
Q 001365 739 INFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISL 818 (1092)
Q Consensus 739 in~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnl 818 (1092)
++.+|..|+||||+|+..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.
T Consensus 62 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~ 130 (167)
T 3v31_A 62 PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNE------YDWNGGTPLLYAVHGNHVKCVKMLLESG-----ADPTI 130 (167)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTC
T ss_pred CCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCc------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCC
Confidence 999999999999999999999999999999999887 7799999999999999999999999998 78999
Q ss_pred cCCCCCcHHHH
Q 001365 819 NKKDGDVAEVT 829 (1092)
Q Consensus 819 kD~~G~ta~ia 829 (1092)
+|..|.++...
T Consensus 131 ~~~~g~t~l~~ 141 (167)
T 3v31_A 131 ETDSGYNSMDL 141 (167)
T ss_dssp CCTTSCCHHHH
T ss_pred cCCCCCCHHHH
Confidence 99999776433
No 73
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.88 E-value=5.2e-22 Score=200.51 Aligned_cols=140 Identities=27% Similarity=0.242 Sum_probs=126.9
Q ss_pred CcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCC
Q 001365 659 DDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN 738 (1092)
Q Consensus 659 ~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gad 738 (1092)
.+.++|+.|+..+... +++.|+++|+++|.+|..|.||||+|+..|+.++|++|+++|++
T Consensus 13 ~~~~~l~~A~~~g~~~--------------------~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 72 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDD--------------------EVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD 72 (169)
T ss_dssp CHHHHHHHHHHHTCHH--------------------HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cccchHHHHHHcCCHH--------------------HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 4556666666655542 78899999999999999999999999999999999999999999
Q ss_pred ccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcc
Q 001365 739 INFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISL 818 (1092)
Q Consensus 739 in~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnl 818 (1092)
++.+|..|+||||+||..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++.
T Consensus 73 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~ 141 (169)
T 2y1l_E 73 VNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNA------NDMEGHTPLHLAAMFGHLEIVEVLLKNG-----ADVNA 141 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTC
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCC
Confidence 999999999999999999999999999999999887 7789999999999999999999999998 77999
Q ss_pred cCCCCCcHHHH
Q 001365 819 NKKDGDVAEVT 829 (1092)
Q Consensus 819 kD~~G~ta~ia 829 (1092)
+|..|.++...
T Consensus 142 ~~~~g~t~l~~ 152 (169)
T 2y1l_E 142 QDKFGKTAFDI 152 (169)
T ss_dssp CCTTSCCHHHH
T ss_pred cCCCCCCHHHH
Confidence 99999776443
No 74
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=7.6e-23 Score=199.58 Aligned_cols=126 Identities=25% Similarity=0.240 Sum_probs=118.8
Q ss_pred CCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCC
Q 001365 657 ENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAG 736 (1092)
Q Consensus 657 d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~G 736 (1092)
+..+.++||.|+..+... +++.|+++|+++|.+|..|+||||+|+. |+.++|++|+++|
T Consensus 9 ~~~g~t~L~~A~~~~~~~--------------------~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g 67 (136)
T 1d9s_A 9 GGSSDAGLATAAARGQVE--------------------TVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHG 67 (136)
T ss_dssp CCCCSCHHHHHHHTTCHH--------------------HHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHT
T ss_pred CCCCccHHHHHHHcCCHH--------------------HHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCC
Confidence 468999999999877643 7888999999999999999999999999 9999999999999
Q ss_pred CCccccCCC-CccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 001365 737 VNINFRDVN-GWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDL 809 (1092)
Q Consensus 737 adin~~D~~-G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga 809 (1092)
++++.+|.. |+||||+||..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|+++|+
T Consensus 68 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 68 AEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDV------CDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp CCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCC------CSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------cCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 999999999 99999999999999999999999999887 77999999999999999999999999984
No 75
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=5.1e-22 Score=193.71 Aligned_cols=125 Identities=25% Similarity=0.259 Sum_probs=114.5
Q ss_pred CCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCC
Q 001365 658 NDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGV 737 (1092)
Q Consensus 658 ~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Ga 737 (1092)
..+.++|+.|+..+... +++.|+++|+++|.+|..|+||||+||..|+.++|++|+++|+
T Consensus 12 ~~~~t~l~~A~~~g~~~--------------------~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 71 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDD--------------------EVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGA 71 (136)
T ss_dssp CHHHHHHHHHHHHTCHH--------------------HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred ccccHHHHHHHHhCCHH--------------------HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 34667777777665543 7888999999999999999999999999999999999999999
Q ss_pred CccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 001365 738 NINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 808 (1092)
Q Consensus 738 din~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 808 (1092)
+++.+|..|+||||+||..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|++.|
T Consensus 72 ~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 72 DVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNA------QDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcC------cCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999887 7899999999999999999999999876
No 76
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.87 E-value=9.6e-22 Score=195.04 Aligned_cols=123 Identities=26% Similarity=0.175 Sum_probs=115.3
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 001365 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 774 (1092)
Q Consensus 695 LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~ 774 (1092)
+++.|++.|++++ .|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+||..|+.++|++|+++|++++.
T Consensus 17 ~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 95 (153)
T 1awc_B 17 EVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNA 95 (153)
T ss_dssp HHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC
T ss_pred HHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCC
Confidence 7788999999887 688999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcHHHH
Q 001365 775 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVT 829 (1092)
Q Consensus 775 ~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta~ia 829 (1092)
+|..|+||||+|+..|+.+++++|+++| ++++.+|..|.++...
T Consensus 96 ------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~ 139 (153)
T 1awc_B 96 ------KDMLKMTALHWATEHNHQEVVELLIKYG-----ADVHTQSKFCKTAFDI 139 (153)
T ss_dssp ------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHH
T ss_pred ------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccCCCCCCHHHH
Confidence 7799999999999999999999999998 7899999999776433
No 77
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.87 E-value=5.3e-22 Score=198.79 Aligned_cols=140 Identities=19% Similarity=0.176 Sum_probs=125.3
Q ss_pred CCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHh-CCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCC
Q 001365 658 NDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAE-GGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAG 736 (1092)
Q Consensus 658 ~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle-~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~G 736 (1092)
.++.++|+.|+..++.. +++.|++ .+.+++..+..|+||||+|+..|+.++|++|+++|
T Consensus 6 ~~~~~~l~~A~~~g~~~--------------------~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 65 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVE--------------------TVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG 65 (165)
T ss_dssp CHHHHHHHHHHHHTCHH--------------------HHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred chhhHHHHHHHHhCCHH--------------------HHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcC
Confidence 56677777777766543 5666666 66788889999999999999999999999999999
Q ss_pred CCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccC
Q 001365 737 VNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAI 816 (1092)
Q Consensus 737 adin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adl 816 (1092)
++++.+|..|+||||+||..|+.++|++|+++|++++. +|..|+||||+|+..|+.+++++|+++| +++
T Consensus 66 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~ 134 (165)
T 3twr_A 66 ADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV------ADLWKFTPLHEAAAKGKYEICKLLLQHG-----ADP 134 (165)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCT
T ss_pred CCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCC
Confidence 99999999999999999999999999999999999887 7789999999999999999999999998 789
Q ss_pred cccCCCCCcHHH
Q 001365 817 SLNKKDGDVAEV 828 (1092)
Q Consensus 817 nlkD~~G~ta~i 828 (1092)
+.+|..|.|+..
T Consensus 135 ~~~~~~g~t~l~ 146 (165)
T 3twr_A 135 TKKNRDGNTPLD 146 (165)
T ss_dssp TCCCTTSCCTGG
T ss_pred cccCCCCCChhH
Confidence 999999977643
No 78
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.87 E-value=8.7e-22 Score=200.47 Aligned_cols=138 Identities=23% Similarity=0.225 Sum_probs=123.0
Q ss_pred CcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhC-CCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCC
Q 001365 659 DDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEG-GKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGV 737 (1092)
Q Consensus 659 ~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~-GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Ga 737 (1092)
+++++|+.|+..++.. +++.|++. +.+++..|..|+||||+||..|+.++|++|+++|+
T Consensus 4 ~~~~~l~~A~~~g~~~--------------------~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 63 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAV--------------------AVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGA 63 (179)
T ss_dssp ---CCHHHHHHHTCHH--------------------HHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCHH--------------------HHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 5667777777766543 56667766 77899999999999999999999999999999999
Q ss_pred CccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCc
Q 001365 738 NINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAIS 817 (1092)
Q Consensus 738 din~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adln 817 (1092)
+++.+|..|+||||+||..|+.++|++|+++|++++. +|..|.||||+|+..|+.+++++|+++| ++++
T Consensus 64 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~ 132 (179)
T 3f6q_A 64 RINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINA------VNEHGNVPLHYACFWGQDQVAEDLVANG-----ALVS 132 (179)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCSS
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------cCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCcc
Confidence 9999999999999999999999999999999999887 7899999999999999999999999998 7899
Q ss_pred ccCCCCCcHH
Q 001365 818 LNKKDGDVAE 827 (1092)
Q Consensus 818 lkD~~G~ta~ 827 (1092)
.+|..|.++.
T Consensus 133 ~~~~~g~tpl 142 (179)
T 3f6q_A 133 ICNKYGEMPV 142 (179)
T ss_dssp BCCTTSCCGG
T ss_pred hhccCCCCcH
Confidence 9999997663
No 79
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.87 E-value=6.5e-22 Score=196.93 Aligned_cols=124 Identities=20% Similarity=0.265 Sum_probs=115.3
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 001365 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 774 (1092)
Q Consensus 695 LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~ 774 (1092)
+++.|+++|+++|..|..|+||||+|+. |+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++.
T Consensus 20 ~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 98 (162)
T 1ihb_A 20 QLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNI 98 (162)
T ss_dssp HHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 7888999999999999999999999999 999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcHHHH
Q 001365 775 LSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVT 829 (1092)
Q Consensus 775 ~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta~ia 829 (1092)
+|..|.||||+|+..|+.+++++|+++|+. .++.+|..|.|+...
T Consensus 99 ------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~~g~t~l~~ 143 (162)
T 1ihb_A 99 ------EDNEGNLPLHLAAKEGHLRVVEFLVKHTAS----NVGHRNHKGDTACDL 143 (162)
T ss_dssp ------CCTTSCCHHHHHHHTTCHHHHHHHHHHSCC----CTTCCCTTSCCHHHH
T ss_pred ------cCCCCCCHHHHHHHcCCHHHHHHHHHccCC----CCCCcCCCCCcHHHH
Confidence 789999999999999999999999999932 368999999776443
No 80
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.86 E-value=1.4e-21 Score=197.10 Aligned_cols=138 Identities=17% Similarity=0.065 Sum_probs=124.0
Q ss_pred chHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCC-CCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCc
Q 001365 661 WDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKG-PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNI 739 (1092)
Q Consensus 661 ~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~Gad-vN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadi 739 (1092)
.++|+.|+..++.. +++.|++.|.+ ++.+|..|+||||+||..|+.++|++|+++|+++
T Consensus 3 ~~~L~~A~~~g~~~--------------------~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 62 (172)
T 3v30_A 3 SLSIHQLAAQGELD--------------------QLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP 62 (172)
T ss_dssp -CCHHHHHHTTCHH--------------------HHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred hhhHHHHHHcCCHH--------------------HHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 46677777665543 67778888877 8999999999999999999999999999999999
Q ss_pred cccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCccc
Q 001365 740 NFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLN 819 (1092)
Q Consensus 740 n~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlk 819 (1092)
+.+|..|+||||+|+..|+.++|++|+++|++++. +|..|+||||+|+..|+.+++++|+++| ++++.+
T Consensus 63 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~ 131 (172)
T 3v30_A 63 HILAKERESALSLASTGGYTDIVGLLLERDVDINI------YDWNGGTPLLYAVRGNHVKCVEALLARG-----ADLTTE 131 (172)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCC
T ss_pred hhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCcccc
Confidence 99999999999999999999999999999999887 7799999999999999999999999998 789999
Q ss_pred CCCCCcHHHH
Q 001365 820 KKDGDVAEVT 829 (1092)
Q Consensus 820 D~~G~ta~ia 829 (1092)
|..|.++...
T Consensus 132 ~~~g~t~l~~ 141 (172)
T 3v30_A 132 ADSGYTPMDL 141 (172)
T ss_dssp CTTSCCHHHH
T ss_pred CCCCCCHHHH
Confidence 9999776433
No 81
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.86 E-value=1.8e-21 Score=184.29 Aligned_cols=125 Identities=30% Similarity=0.345 Sum_probs=116.5
Q ss_pred CcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCC
Q 001365 659 DDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN 738 (1092)
Q Consensus 659 ~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gad 738 (1092)
+|+|+|+.|+..+... +++.|+++|++++..|..|.||||+|+..|+.+++++|+++|++
T Consensus 1 ~g~t~L~~A~~~~~~~--------------------~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 60 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLE--------------------VVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60 (126)
T ss_dssp CCCCHHHHHHHHTCHH--------------------HHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CCccHHHHHHHcCcHH--------------------HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC
Confidence 4778888888766543 77888899999999999999999999999999999999999999
Q ss_pred ccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 001365 739 INFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDL 809 (1092)
Q Consensus 739 in~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga 809 (1092)
++.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|+
T Consensus 61 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 61 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA------KDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred CcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 999999999999999999999999999999999887 77999999999999999999999999994
No 82
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.85 E-value=4.8e-22 Score=212.62 Aligned_cols=138 Identities=27% Similarity=0.308 Sum_probs=126.4
Q ss_pred CCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCC
Q 001365 658 NDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGV 737 (1092)
Q Consensus 658 ~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Ga 737 (1092)
..++++|+.|+..+... +++.|++.|+++|.+|..|+||||+||..|+.++|++|+++|+
T Consensus 19 ~~~~t~L~~A~~~g~~~--------------------~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga 78 (229)
T 2vge_A 19 LNPLVLLLDAALTGELE--------------------VVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGA 78 (229)
T ss_dssp SCHHHHHHHHHHHTCHH--------------------HHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cchhHHHHHHHHcCCHH--------------------HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 57888999988876643 7888999999999999999999999999999999999999999
Q ss_pred CccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC-CCCCCHHHHH--HHcCcHHHHHHHHHcCCCCCcc
Q 001365 738 NINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKY-PSGRTPADLA--SSIGHKGIAGYLAESDLSSALS 814 (1092)
Q Consensus 738 din~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D-~~G~TPLhlA--a~~G~~eiv~~LLe~Ga~~h~a 814 (1092)
++|.+|..|+||||+||..|+.++|++|+++|++++. ++ ..|+||||+| +..|+.+++++|+++| +
T Consensus 79 ~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~------~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g-----a 147 (229)
T 2vge_A 79 NVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFA------TTLSDGATAFEKCDPYREGYADCATYLADVE-----Q 147 (229)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC------CCSSTTCCTGGGCCTTSTTHHHHHHHHHHHH-----H
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc------ccCCCCCCHHHHHHHHhcChHHHHHHHHHcC-----C
Confidence 9999999999999999999999999999999999987 54 6999999999 9999999999999998 6
Q ss_pred cCcccCCCCCcH
Q 001365 815 AISLNKKDGDVA 826 (1092)
Q Consensus 815 dlnlkD~~G~ta 826 (1092)
+++.+|..|.++
T Consensus 148 ~~~~~~~~~~~~ 159 (229)
T 2vge_A 148 SMGLMNSGAVYA 159 (229)
T ss_dssp HTTTSGGGEEEE
T ss_pred CcccccCCchHH
Confidence 788888777554
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.85 E-value=2.3e-21 Score=193.48 Aligned_cols=143 Identities=15% Similarity=0.071 Sum_probs=105.0
Q ss_pred CCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhhhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHH
Q 001365 569 SQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNS 648 (1092)
Q Consensus 569 ~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~ 648 (1092)
.+..|.||||+||..|+ +..+++|+..|++++..|..|.||||..
T Consensus 8 ~~~~~~t~L~~A~~~g~----~~~v~~Ll~~g~~~~~~~~~g~t~L~~A------------------------------- 52 (156)
T 1bi7_B 8 SMEPSADWLATAAARGR----VEEVRALLEAGANPNAPNSYGRRPIQVM------------------------------- 52 (156)
T ss_dssp --CCSTTHHHHHHHHTC----HHHHHHHHTTTCCTTCCCSSSCCTTTSS-------------------------------
T ss_pred CCccchHHHHHHHHcCC----HHHHHHHHHcCCCCCCCCCCCCCHHHHH-------------------------------
Confidence 35568888888888875 4455677888888888877777777711
Q ss_pred HHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCc-HHHHHHHcCCHh
Q 001365 649 KISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQG-VLHFAAALGYDW 727 (1092)
Q Consensus 649 ~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~T-pLH~AA~~G~~~ 727 (1092)
+ .+.. -++++|+++|+++|.+|..|+| |||+|+..|+.+
T Consensus 53 -------------------~-~~~~--------------------~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~ 92 (156)
T 1bi7_B 53 -------------------M-MGSA--------------------RVAELLLLHGAEPNCADPATLTRPVHDAAREGFLD 92 (156)
T ss_dssp -------------------C-TTCH--------------------HHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHH
T ss_pred -------------------H-cCCH--------------------HHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHH
Confidence 0 0010 1677888999999999999999 999999999999
Q ss_pred HHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 001365 728 ALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLA 792 (1092)
Q Consensus 728 iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlA 792 (1092)
+|++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++. +|..|.||.+-+
T Consensus 93 ~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~~~~~ 151 (156)
T 1bi7_B 93 TLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG------SNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------------
T ss_pred HHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCc------cCcCcCcccccC
Confidence 99999999999999999999999999999999999999999999888 778999998743
No 84
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.84 E-value=1.6e-20 Score=186.04 Aligned_cols=123 Identities=23% Similarity=0.247 Sum_probs=112.1
Q ss_pred HHHHHHhC-CCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCC
Q 001365 695 LVQKAAEG-GKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPG 773 (1092)
Q Consensus 695 LvklLle~-GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin 773 (1092)
+++.|++. +.+++..|..|.||||+ |..|+.++|++|+++|++++.+|..|+||||+||..|+.++|++|+++|++++
T Consensus 17 ~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 95 (156)
T 1bd8_A 17 EVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVN 95 (156)
T ss_dssp HHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 56666766 55999999999999999 99999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcHHHHh
Q 001365 774 ALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTG 830 (1092)
Q Consensus 774 ~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta~iaa 830 (1092)
. +|..|+||||+|+..|+.+++++|++. ++++.+|..|.++...+
T Consensus 96 ~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~------~~~~~~~~~g~t~l~~A 140 (156)
T 1bd8_A 96 V------PDGTGALPIHLAVQEGHTAVVSFLAAE------SDLHRRDARGLTPLELA 140 (156)
T ss_dssp C------CCTTSCCHHHHHHHHTCHHHHHHHHTT------SCTTCCCTTSCCHHHHH
T ss_pred C------cCCCCCcHHHHHHHhChHHHHHHHHhc------cCCCCcCCCCCCHHHHH
Confidence 7 778999999999999999999999985 47899999997764433
No 85
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.84 E-value=9.2e-21 Score=184.51 Aligned_cols=123 Identities=24% Similarity=0.286 Sum_probs=108.7
Q ss_pred CCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 001365 703 GKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKY 782 (1092)
Q Consensus 703 GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D 782 (1092)
|+|+ .+|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+||..|+.++|++|+++|++++. +|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~~ 73 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT------TG 73 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC------cC
Confidence 6788 6899999999999999999999999999999999999999999999999999999999999999887 77
Q ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcH-HHHhhhhhccc
Q 001365 783 PSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-EVTGATAVQTV 837 (1092)
Q Consensus 783 ~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta-~iaa~~~v~~l 837 (1092)
..|.||||+|+..|+.+++++|+++| ++++.+|..|.++ .++.......+
T Consensus 74 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~tpl~~A~~~~~~~~ 124 (137)
T 3c5r_A 74 YQNDSPLHDAAKNGHVDIVKLLLSYG-----ASRNAVNIFGLRPVDYTDDESMKSL 124 (137)
T ss_dssp GGGCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCGGGGCCCHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHhhccHHHH
Confidence 89999999999999999999999998 7899999999665 44444333333
No 86
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.83 E-value=2.6e-21 Score=188.32 Aligned_cols=126 Identities=22% Similarity=0.183 Sum_probs=114.8
Q ss_pred CCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCC
Q 001365 657 ENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAG 736 (1092)
Q Consensus 657 d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~G 736 (1092)
+..|+|+||.|+..+... +++.|++.|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 7 ~~~g~t~L~~A~~~~~~~--------------------~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 66 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIP--------------------SVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK 66 (137)
T ss_dssp CTTCCCHHHHHHHHTCHH--------------------HHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHcCCHH--------------------HHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 468999999998876643 778899999999999999999999999999999999999999
Q ss_pred CCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 001365 737 VNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 808 (1092)
Q Consensus 737 adin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 808 (1092)
++++.+|..|+||||+|+..|+.++|++|+++|++++. +|..|.||||+|+..++.+++.+|.+.+
T Consensus 67 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 67 ALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA------VNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp CCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred CcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------CCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 99999999999999999999999999999999999887 7899999999999999999999888765
No 87
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.83 E-value=3.8e-21 Score=202.43 Aligned_cols=135 Identities=20% Similarity=0.203 Sum_probs=112.2
Q ss_pred CCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHC-C
Q 001365 658 NDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA-G 736 (1092)
Q Consensus 658 ~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~-G 736 (1092)
..|.|+||.|+..+... +++.|++.|+++|.+|..|+||||+||..|+.++|++||++ |
T Consensus 71 ~~g~t~L~~A~~~g~~~--------------------~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g 130 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLS--------------------WLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPN 130 (222)
T ss_dssp EEESCHHHHHHHHTCHH--------------------HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTT
T ss_pred cccccccccccccCcHH--------------------HHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCC
Confidence 57889999988876643 78889999999999999999999999999999999999999 9
Q ss_pred CCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccC
Q 001365 737 VNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAI 816 (1092)
Q Consensus 737 adin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adl 816 (1092)
++++.+|..|+||||+||..|+.++|++||++|++++. +|..|.||||+|+..|+.++++.|++.| +..
T Consensus 131 ~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~~~~l~~l~~~~-----~~~ 199 (222)
T 3ehr_A 131 IELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDL------RNIEKKLAFDMATNAACASLLKKKQGTD-----AVR 199 (222)
T ss_dssp CCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCC------CCTTSCCHHHHCCSHHHHHHHC--------------
T ss_pred CCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc------ccCCCCCHHHHhcchhHHHHHHHHhccc-----hhh
Confidence 99999999999999999999999999999999999888 7899999999999999999999999998 556
Q ss_pred cccCCCC
Q 001365 817 SLNKKDG 823 (1092)
Q Consensus 817 nlkD~~G 823 (1092)
++++.+|
T Consensus 200 ~~~~~~~ 206 (222)
T 3ehr_A 200 TLSNAED 206 (222)
T ss_dssp -------
T ss_pred hccchhh
Confidence 6666655
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.83 E-value=5.1e-20 Score=179.47 Aligned_cols=124 Identities=21% Similarity=0.210 Sum_probs=105.8
Q ss_pred ccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhh
Q 001365 537 QEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN 616 (1092)
Q Consensus 537 ~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~ 616 (1092)
.+.||||+||..|+.+++++|++.|++++ ..+..|.||||+||.+|+ +.
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~----~~------------------------- 61 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADVN--AKDEYGLTPLYLATAHGH----LE------------------------- 61 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHHTC----HH-------------------------
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCCC--CcCCCCCCHHHHHHHcCC----HH-------------------------
Confidence 35678888888888888888888888766 456668888888887653 11
Q ss_pred hHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHH
Q 001365 617 LRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLV 696 (1092)
Q Consensus 617 ~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~Lv 696 (1092)
++
T Consensus 62 ------------------------------------------------------------------------------~v 63 (136)
T 2jab_A 62 ------------------------------------------------------------------------------IV 63 (136)
T ss_dssp ------------------------------------------------------------------------------HH
T ss_pred ------------------------------------------------------------------------------HH
Confidence 45
Q ss_pred HHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcC
Q 001365 697 QKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALG 769 (1092)
Q Consensus 697 klLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~G 769 (1092)
++|+++|+++|.+|..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++|
T Consensus 64 ~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 64 EVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 5567778888999999999999999999999999999999999999999999999999999999999999986
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.83 E-value=7.2e-20 Score=173.25 Aligned_cols=77 Identities=34% Similarity=0.361 Sum_probs=72.0
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCC
Q 001365 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAA 771 (1092)
Q Consensus 695 LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAd 771 (1092)
++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 50 ~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 50 VVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 44556777888888999999999999999999999999999999999999999999999999999999999999986
No 90
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.82 E-value=2.1e-20 Score=182.22 Aligned_cols=116 Identities=19% Similarity=0.158 Sum_probs=109.0
Q ss_pred CCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 001365 703 GKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKY 782 (1092)
Q Consensus 703 GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D 782 (1092)
++++|..|..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+||. |+.++|++|+++|++++. +|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~------~~ 74 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC------AD 74 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC------CB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC------cC
Confidence 67899999999999999999999999999999999999999999999999999 999999999999999887 77
Q ss_pred CC-CCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcHHHHh
Q 001365 783 PS-GRTPADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTG 830 (1092)
Q Consensus 783 ~~-G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta~iaa 830 (1092)
.. |.||||+|+..|+.+++++|+++| ++++.+|..|.|+...+
T Consensus 75 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~tpl~~A 118 (136)
T 1d9s_A 75 PATLTRPVHDAAREGFLDTLVVLHRAG-----ARLDVCDAWGRLPVDLA 118 (136)
T ss_dssp TTTTBCHHHHHHHHTCHHHHHHHHHTC-----CCCCCCSSSSSCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCCHHHHH
Confidence 88 999999999999999999999998 78999999997764433
No 91
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=4.9e-20 Score=168.06 Aligned_cols=92 Identities=37% Similarity=0.428 Sum_probs=87.7
Q ss_pred CCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHH
Q 001365 712 CGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADL 791 (1092)
Q Consensus 712 ~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhl 791 (1092)
+|+||||+||..|+.+++++|+++|+++|.+|..|+||||+||..|+.++|++|+++|++++. +|..|+||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA------KDKNGRTPLHL 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------cCCCCCCHHHH
Confidence 489999999999999999999999999999999999999999999999999999999999887 78999999999
Q ss_pred HHHcCcHHHHHHHHHcCC
Q 001365 792 ASSIGHKGIAGYLAESDL 809 (1092)
Q Consensus 792 Aa~~G~~eiv~~LLe~Ga 809 (1092)
|+..|+.+++++|+++|+
T Consensus 75 A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HHHTTCHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCC
Confidence 999999999999999984
No 92
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=2e-20 Score=179.02 Aligned_cols=117 Identities=24% Similarity=0.188 Sum_probs=101.3
Q ss_pred CCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCC
Q 001365 658 NDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGV 737 (1092)
Q Consensus 658 ~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Ga 737 (1092)
..+.++|+.|+..+... +++.|++.|+++|.+|..|+||||+||..|+.++|++|+++|+
T Consensus 5 ~~~~~~l~~A~~~~~~~--------------------~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 64 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLD--------------------EVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGA 64 (123)
T ss_dssp --CHHHHHHHHHTTCHH--------------------HHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred cccchHHHHHHHcCCHH--------------------HHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 35667787777766543 7788899999999999999999999999999999999999999
Q ss_pred CccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHH
Q 001365 738 NINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIGHKGI 800 (1092)
Q Consensus 738 din~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~ei 800 (1092)
+++.+|..|+||||+|+..|+.++|++|+++|++++. +|..|.||||+|+..+..++
T Consensus 65 ~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 65 DINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTV------KGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHCCCHHHHHH
T ss_pred CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------cCCCCCCHHHHhCCHHHHHH
Confidence 9999999999999999999999999999999999877 78999999999954444443
No 93
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.81 E-value=5e-22 Score=228.80 Aligned_cols=214 Identities=9% Similarity=-0.013 Sum_probs=141.7
Q ss_pred ChHHHHHHHcCCcHHHHHHHHCCCCCC-CCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCc---ccccCCCCcHH
Q 001365 539 AENCKWSCMFGEIEVPAEIVAGGVLRC-HTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDV---DVADNCGDITS 614 (1092)
Q Consensus 539 ~TpLH~A~~fG~veVv~~LL~~Gadin-~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadv---na~D~~G~TpL 614 (1092)
.||||+||..|+.+++++|++.|+... ....+..|.||||+||.+|+ +..+++|++.|+++ +..+.+ .|||
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~----~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGH----LHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTC----HHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCC----HHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 489999999999999999999998321 11234568999999999996 44457899999863 333222 7888
Q ss_pred hh----hHHHHHHHHhc-CCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhh-hhcCCChHHHHHHHHHHHHH
Q 001365 615 EN----LRMQFGKLLCL-TSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLT-AEEKFSSEEVKEKLVQKLLK 688 (1092)
Q Consensus 615 ~~----~~~~lvkLLl~-gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~-~~~~~s~~~~~~~lL~~a~k 688 (1092)
|. ++.+++++|+. |++++. .. .+..|+||||.|+ ..++..
T Consensus 168 h~Aa~~G~~eiv~~Ll~~ga~~~~---------------~~-----~d~~g~TpL~~Aa~~~G~~e-------------- 213 (376)
T 2aja_A 168 RLAAENGHLHVLNRLCELAPTEAT---------------AM-----IQAENYYAFRWAAVGRGHHN-------------- 213 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSCGGGHH---------------HH-----HHHHHHHHHHHHHSTTCCHH--------------
T ss_pred HHHHHCCCHHHHHHHHHcCCccch---------------hc-----cCCCCCCHHHHHHHHCCCHH--------------
Confidence 84 77788887754 443211 00 0135678888887 766643
Q ss_pred hhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHH-------
Q 001365 689 EKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERT------- 761 (1092)
Q Consensus 689 ~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~ei------- 761 (1092)
++++|+++|+ .|.||||+|+..|+.+++++|+++|++++.+| +++++|+..|+.++
T Consensus 214 ------iv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~----~~l~~A~~~g~~~vv~~~~~~ 276 (376)
T 2aja_A 214 ------VINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH----DAFKLSNPDGVFDLVTKSECL 276 (376)
T ss_dssp ------HHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHH----TTTTTTSSSSCCCCSSHHHHH
T ss_pred ------HHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHHHhcCccccccc----HHHHHHHHCCChhhhcHHhhh
Confidence 6777777664 27788888888888888888888888877654 35566666665442
Q ss_pred -----HHHHHHcCCC--------------CCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 001365 762 -----VASLIALGAA--------------PGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 808 (1092)
Q Consensus 762 -----V~~LLe~GAd--------------in~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 808 (1092)
++.|+..|.. +....+.....+.+.||||+|+..|+.++|++|++.|
T Consensus 277 ~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~ 342 (376)
T 2aja_A 277 QGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP 342 (376)
T ss_dssp HHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSH
T ss_pred hhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcCh
Confidence 2233333221 0000000112345778999999999999999999865
No 94
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.81 E-value=8.7e-20 Score=174.54 Aligned_cols=111 Identities=23% Similarity=0.178 Sum_probs=101.0
Q ss_pred ccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCH
Q 001365 709 LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTP 788 (1092)
Q Consensus 709 ~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TP 788 (1092)
.+..|.||||+|+..|+.++|+.|++.|++++.+|..|+||||+||..|+.++|++|+++|++++. +|..|+||
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~d~~g~tp 76 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA------PDKHHITP 76 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC------CCTTSCCH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc------CCCCCCCH
Confidence 356789999999999999999999999999999999999999999999999999999999999887 78999999
Q ss_pred HHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcHHHHh
Q 001365 789 ADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTG 830 (1092)
Q Consensus 789 LhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta~iaa 830 (1092)
||+|+..|+.+++++|+++| ++++.+|..|.++...+
T Consensus 77 L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 77 LLSAVYEGHVSCVKLLLSKG-----ADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp HHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHC
T ss_pred HHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHh
Confidence 99999999999999999998 77999999997764443
No 95
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.81 E-value=1e-18 Score=192.56 Aligned_cols=110 Identities=19% Similarity=0.152 Sum_probs=102.2
Q ss_pred HHHHHHhCCCCCC------cccCCCCcHHHHHHHc---CCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHH
Q 001365 695 LVQKAAEGGKGPC------VLDHCGQGVLHFAAAL---GYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASL 765 (1092)
Q Consensus 695 LvklLle~GadvN------~~D~~G~TpLH~AA~~---G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~L 765 (1092)
.+..++..|++++ ..|..|+||||+||.. |+.++|++||++|+++|.+|..|+||||+||..|+.++|++|
T Consensus 145 ~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~L 224 (278)
T 1dcq_A 145 GLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLL 224 (278)
T ss_dssp HHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4566788899854 4588999999999999 899999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Q 001365 766 IALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLS 810 (1092)
Q Consensus 766 Le~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~ 810 (1092)
|++||+++. +|..|.||||+|+..|+.+++++|+++|+.
T Consensus 225 l~~gad~~~------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 225 LRGKASIEI------ANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHcCCCCCC------ccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999888 789999999999999999999999999853
No 96
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.80 E-value=8.5e-20 Score=187.12 Aligned_cols=111 Identities=28% Similarity=0.304 Sum_probs=99.6
Q ss_pred CcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCC
Q 001365 659 DDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN 738 (1092)
Q Consensus 659 ~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gad 738 (1092)
.|.||||.|+..++.. +++.|++ |+++|.+|..|+||||+||..|+.++|++|+++|++
T Consensus 43 ~g~t~L~~A~~~g~~~--------------------~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 101 (183)
T 3deo_A 43 EYETPWWTAARKADEQ--------------------ALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD 101 (183)
T ss_dssp HHHHHHHHHHHTTCHH--------------------HHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHcCCHH--------------------HHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 5667777776655432 6777888 999999999999999999999999999999999999
Q ss_pred ccccC-CCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC
Q 001365 739 INFRD-VNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLASSIG 796 (1092)
Q Consensus 739 in~~D-~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa~~G 796 (1092)
+|.+| ..|+||||+|+..|+.++|++|+++|++++. +|..|+||||+|+..+
T Consensus 102 ~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 102 LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEV------EDERGLTALELAREIL 154 (183)
T ss_dssp TTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTC------CCTTSCCHHHHHHHHH
T ss_pred CCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcC------CCCCCCCHHHHHHHhc
Confidence 99998 8999999999999999999999999999887 7899999999998763
No 97
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.80 E-value=2.8e-20 Score=193.25 Aligned_cols=138 Identities=13% Similarity=-0.047 Sum_probs=114.1
Q ss_pred cchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCccc-CCCCcHHHHHHHcCCH----hHHHHHHH
Q 001365 660 DWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLD-HCGQGVLHFAAALGYD----WALEPTTV 734 (1092)
Q Consensus 660 g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D-~~G~TpLH~AA~~G~~----~iVk~LL~ 734 (1092)
++++|+.++..+.+. .++.++..+ ++..+ ..|+||||+|+..|+. ++|++||+
T Consensus 6 ~~~~l~~Aa~~g~~~--------------------~~~~l~~~~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~ 63 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYE--------------------DFLELFEKG--YEDKESVLKSNILYDVLRNNNDEARYKISMFLIN 63 (186)
T ss_dssp HCSSHHHHHHHSCHH--------------------HHHHHHHHS--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHcCCHH--------------------HHHHHHhcC--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHH
Confidence 456677777666542 233344444 55666 7899999999999975 58999999
Q ss_pred CCCCccccCCCCccHHHHHHHcCC------HHHHHHHHHcCCCCCCCCCCCCCCCCCC-CHHHHHHHcC-----cHHHHH
Q 001365 735 AGVNINFRDVNGWTALHWAAYCGR------ERTVASLIALGAAPGALSDPTPKYPSGR-TPADLASSIG-----HKGIAG 802 (1092)
Q Consensus 735 ~Gadin~~D~~G~TpLH~Aa~~G~------~eiV~~LLe~GAdin~~~D~n~~D~~G~-TPLhlAa~~G-----~~eiv~ 802 (1092)
+|+++|.+|..|+||||+|+..|+ .++|++||++||++|+ +|..|+ ||||+|+..+ +.++++
T Consensus 64 ~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~------~d~~g~ttpLh~A~~~~~~~~~~~~iv~ 137 (186)
T 3t8k_A 64 KGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITA------LYKPYKIVVFKNIFNYFVDENEMIPLYK 137 (186)
T ss_dssp TTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSS------CBGGGTBCTTGGGGGCCSCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCc------cCCCcCchHHHHHHHcCCChhhHHHHHH
Confidence 999999999999999999999997 6889999999999988 789999 9999999954 467999
Q ss_pred HHHH-cCCCCCcccCcccCCCCCcHHHHh
Q 001365 803 YLAE-SDLSSALSAISLNKKDGDVAEVTG 830 (1092)
Q Consensus 803 ~LLe-~Ga~~h~adlnlkD~~G~ta~iaa 830 (1092)
+|++ +| ++++++|..|.||...+
T Consensus 138 ~Ll~~~g-----ad~~~~d~~G~TpL~~A 161 (186)
T 3t8k_A 138 LIFSQSG-----LQLLIKDKWGLTALEFV 161 (186)
T ss_dssp HHHTSTT-----CCTTCCCTTSCCHHHHH
T ss_pred HHHHhcC-----CCCcccCCCCCCHHHHH
Confidence 9999 88 78999999997775444
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.79 E-value=1.2e-19 Score=202.50 Aligned_cols=92 Identities=20% Similarity=0.040 Sum_probs=79.4
Q ss_pred HHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 001365 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGA 774 (1092)
Q Consensus 695 LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~ 774 (1092)
++++|+++|+++|.+|..|+||||+|+..|+.++|++||++|++++.+|..|+||||+|+..|+.++|++|+++|++
T Consensus 208 iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~--- 284 (301)
T 2b0o_E 208 LVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG--- 284 (301)
T ss_dssp HHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---
T ss_pred HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---
Confidence 56677888999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCcH
Q 001365 775 LSDPTPKYPSGRTPADLASSIGHK 798 (1092)
Q Consensus 775 ~~D~n~~D~~G~TPLhlAa~~G~~ 798 (1092)
.|.||||+|+..|+.
T Consensus 285 ---------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 285 ---------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp ---------TTSSCCC--------
T ss_pred ---------CCCChhHHHHhcCCc
Confidence 478999999998874
No 99
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.79 E-value=3.4e-21 Score=221.92 Aligned_cols=184 Identities=9% Similarity=0.067 Sum_probs=146.0
Q ss_pred cChHHHHHHH-cCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHhh
Q 001365 538 EAENCKWSCM-FGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSEN 616 (1092)
Q Consensus 538 ~~TpLH~A~~-fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~~ 616 (1092)
+.+.+++|+. +++.+++++|+..|++ +.||||+||.+|+ +..+++|++.|+.....+
T Consensus 65 ~ll~~~~a~~~~~~~~~~~~l~~~g~~---------~~T~Lh~Aa~~G~----~e~v~~Ll~~ga~~~~~~--------- 122 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWSDAHKKGIK---------SEVICFVAAITGC----SSALDTLCLLLTSDEIVK--------- 122 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHHHHHHHTCC---------HHHHHHHHHHHCC----HHHHHHHTTC--CCSSCC---------
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHcCCC---------cCCHHHHHHHcCC----HHHHHHHHHcCCcHHHHH---------
Confidence 3567888877 6889999999999875 5699999999986 444567888776211110
Q ss_pred hHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHH
Q 001365 617 LRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLV 696 (1092)
Q Consensus 617 ~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~Lv 696 (1092)
. .+..+.+|||.|+..|+.+ ++
T Consensus 123 -------------------~-------------------~~~~~~tpL~~Aa~~G~~e--------------------iv 144 (376)
T 2aja_A 123 -------------------V-------------------IQAENYQAFRLAAENGHLH--------------------VL 144 (376)
T ss_dssp ----------------------------------------CHHHHHHHHHHHHTTCHH--------------------HH
T ss_pred -------------------H-------------------hccCCCCHHHHHHHcCCHH--------------------HH
Confidence 0 0124567888888877653 88
Q ss_pred HHHHhCCCCC---CcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccc--cCCCCccHHHHHH-HcCCHHHHHHHHHcCC
Q 001365 697 QKAAEGGKGP---CVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINF--RDVNGWTALHWAA-YCGRERTVASLIALGA 770 (1092)
Q Consensus 697 klLle~Gadv---N~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~--~D~~G~TpLH~Aa-~~G~~eiV~~LLe~GA 770 (1092)
++|+++|+++ +..+.. .||||+||..|+.++|++|+++|++++. +|..|+||||+|| ..|+.++|++|++.|+
T Consensus 145 ~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga 223 (376)
T 2aja_A 145 NRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV 223 (376)
T ss_dssp HHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH
T ss_pred HHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC
Confidence 8999999763 322333 9999999999999999999999999998 9999999999999 9999999999999774
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccCcccC
Q 001365 771 APGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLSSALSAISLNK 820 (1092)
Q Consensus 771 din~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD 820 (1092)
.|.||||+|+.+|+.+++++|+++| ++++.++
T Consensus 224 -------------~~~taL~~Aa~~g~~evv~lL~~~g-----a~~~~~~ 255 (376)
T 2aja_A 224 -------------MLAYAEIHEFEYGEKYVNPFIARHV-----NRLKEMH 255 (376)
T ss_dssp -------------HHHHHHHCTTTTTTTTHHHHHHHHH-----HHHHHHH
T ss_pred -------------ccchHHHHHHHCCCHHHHHHHHhcC-----ccccccc
Confidence 3789999999999999999999988 5555544
No 100
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.79 E-value=1.3e-19 Score=170.98 Aligned_cols=108 Identities=29% Similarity=0.315 Sum_probs=101.7
Q ss_pred cccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCC
Q 001365 708 VLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRT 787 (1092)
Q Consensus 708 ~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~T 787 (1092)
.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+||..|+.++|++|+++|++++. +|..|+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------~d~~g~t 77 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA------RSKDGNT 77 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC------CCTTCCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc------cCCCCCC
Confidence 4788999999999999999999999999999999999999999999999999999999999999887 7789999
Q ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcH
Q 001365 788 PADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA 826 (1092)
Q Consensus 788 PLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta 826 (1092)
|||+|+..|+.+++++|+++| ++++.++..|.++
T Consensus 78 pl~~A~~~~~~~~~~~Ll~~g-----a~~n~~~~~~~~~ 111 (115)
T 2l6b_A 78 PEHLAKKNGHHEIVKLLDAKG-----ADVNARSWGSSHH 111 (115)
T ss_dssp TTHHHHTTTCHHHHHHHHTTS-----SSHHHHSCCCC--
T ss_pred HHHHHHHCCCHHHHHHHHHcC-----CCCCcCCcccccc
Confidence 999999999999999999998 7899999998665
No 101
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.79 E-value=2.5e-19 Score=192.83 Aligned_cols=123 Identities=27% Similarity=0.304 Sum_probs=110.9
Q ss_pred CcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCC
Q 001365 659 DDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN 738 (1092)
Q Consensus 659 ~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gad 738 (1092)
.|.||||.|+..++.. +++.|++ |+++|.+|..|+||||+||..|+.++|++||++|++
T Consensus 44 ~g~t~L~~A~~~g~~~--------------------~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 102 (244)
T 3ui2_A 44 EYETPWWTAARKADEQ--------------------ALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD 102 (244)
T ss_dssp HHHHHHHHHHTTTCHH--------------------HHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHcCCHH--------------------HHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 5677777777665542 6778888 999999999999999999999999999999999999
Q ss_pred ccccC-CCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH----------------HcCcHHHH
Q 001365 739 INFRD-VNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPADLAS----------------SIGHKGIA 801 (1092)
Q Consensus 739 in~~D-~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPLhlAa----------------~~G~~eiv 801 (1092)
+|.+| ..|+||||+||..|+.++|++|+++|++++. +|..|+||||+|+ ..|+.+++
T Consensus 103 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv 176 (244)
T 3ui2_A 103 LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEV------EDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVI 176 (244)
T ss_dssp TTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------CCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHH
Confidence 99999 8899999999999999999999999999987 7789999988887 67899999
Q ss_pred HHHHHcC
Q 001365 802 GYLAESD 808 (1092)
Q Consensus 802 ~~LLe~G 808 (1092)
++|++.+
T Consensus 177 ~~L~~~~ 183 (244)
T 3ui2_A 177 NVLEGQV 183 (244)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999865
No 102
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.78 E-value=5.4e-19 Score=210.05 Aligned_cols=110 Identities=23% Similarity=0.205 Sum_probs=104.6
Q ss_pred HHHHHHhCCCCCCcc------cCCCCcHHHHHHH---cCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHH
Q 001365 695 LVQKAAEGGKGPCVL------DHCGQGVLHFAAA---LGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASL 765 (1092)
Q Consensus 695 LvklLle~GadvN~~------D~~G~TpLH~AA~---~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~L 765 (1092)
+++.|++.|+++|.. |..|.||||+||. .|+.++|++||++|+++|.+|..|+||||+||..|+.++|++|
T Consensus 147 ~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~L 226 (497)
T 3lvq_E 147 SVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLL 226 (497)
T ss_dssp HHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHH
T ss_pred HHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHH
Confidence 778899999999988 8899999999976 8999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Q 001365 766 IALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDLS 810 (1092)
Q Consensus 766 Le~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga~ 810 (1092)
|++||++|+ +|..|+||||+|+..|+.+++++|+++|++
T Consensus 227 l~~ga~~~~------~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 265 (497)
T 3lvq_E 227 LKGRALVGT------VNEAGETALDIARKKHHKECEELLEQAQAG 265 (497)
T ss_dssp HHTCCCCSC------CCTTCCCHHHHHHHTTCHHHHHHHHHTCC-
T ss_pred HHcCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999999988 789999999999999999999999999944
No 103
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.76 E-value=1.5e-18 Score=206.13 Aligned_cols=139 Identities=17% Similarity=0.004 Sum_probs=110.3
Q ss_pred hHHHHHHHcCCcHHHHHHHHCCCCCCCC----CCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHh
Q 001365 540 ENCKWSCMFGEIEVPAEIVAGGVLRCHT----SSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE 615 (1092)
Q Consensus 540 TpLH~A~~fG~veVv~~LL~~Gadin~~----~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~ 615 (1092)
+.||+||..|++++++.||+.|+++|.. ..+..|.||||+||.... .
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~-----------------------~------ 184 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVAN-----------------------Q------ 184 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCC-----------------------T------
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcc-----------------------c------
Confidence 5899999999999999999999998743 126679999999985210 0
Q ss_pred hhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHH
Q 001365 616 NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWL 695 (1092)
Q Consensus 616 ~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~L 695 (1092)
+ . ..+
T Consensus 185 -g------------------------------------------------------~--------------------~~~ 189 (497)
T 3lvq_E 185 -A------------------------------------------------------S--------------------LPL 189 (497)
T ss_dssp -T------------------------------------------------------T--------------------HHH
T ss_pred -c------------------------------------------------------c--------------------HHH
Confidence 0 0 005
Q ss_pred HHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 001365 696 VQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGAL 775 (1092)
Q Consensus 696 vklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~ 775 (1092)
+++|+++|+++|.+|..|+||||+||..|+.++|++||++|+++|.+|..|+||||+|+..|+.++|++|+++||+++.
T Consensus 190 v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~- 268 (497)
T 3lvq_E 190 VDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA- 268 (497)
T ss_dssp HHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred HHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC-
Confidence 6677888999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCCCCCCHHHHHHH
Q 001365 776 SDPTPKYPSGRTPADLASS 794 (1092)
Q Consensus 776 ~D~n~~D~~G~TPLhlAa~ 794 (1092)
||+|++..
T Consensus 269 -----------~~~h~~~~ 276 (497)
T 3lvq_E 269 -----------FPLHVDYS 276 (497)
T ss_dssp -------------------
T ss_pred -----------Ccceeecc
Confidence 57776654
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.76 E-value=1.9e-18 Score=198.47 Aligned_cols=109 Identities=24% Similarity=0.237 Sum_probs=104.8
Q ss_pred HHHHHHhCCCCCCccc--CCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCC
Q 001365 695 LVQKAAEGGKGPCVLD--HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP 772 (1092)
Q Consensus 695 LvklLle~GadvN~~D--~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdi 772 (1092)
+++.|+++|+++|..| ..|.||||+||..|+.++|++||++|+++|.+|..|+||||+|+..|+.++|++||++|+++
T Consensus 215 ~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~ 294 (368)
T 3jue_A 215 TMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADL 294 (368)
T ss_dssp HHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCC
Confidence 7788999999999998 89999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 001365 773 GALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESDL 809 (1092)
Q Consensus 773 n~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~Ga 809 (1092)
++ +|..|.||||+|+..|+.+++++|+..+.
T Consensus 295 ~~------~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 295 GA------RDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp TC------CCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CC------cCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 87 78999999999999999999999999873
No 105
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.76 E-value=7.4e-19 Score=184.95 Aligned_cols=122 Identities=22% Similarity=0.180 Sum_probs=108.0
Q ss_pred ccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCC
Q 001365 709 LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIAL-GAAPGALSDPTPKYPSGRT 787 (1092)
Q Consensus 709 ~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~-GAdin~~~D~n~~D~~G~T 787 (1092)
.+..|.||||+||..|+.++|++||+.|++++.+|..|+||||+||..|+.++|++||++ |++++. +|..|+|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~------~d~~g~t 142 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ------QNKLGDT 142 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC------CCTTSCC
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc------cCCCCCC
Confidence 577899999999999999999999999999999999999999999999999999999999 999887 7899999
Q ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcH-HHHhhhhhccccccC
Q 001365 788 PADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVA-EVTGATAVQTVPQRC 841 (1092)
Q Consensus 788 PLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta-~iaa~~~v~~l~~~~ 841 (1092)
|||+|+..|+.+++++|+++| ++++++|..|.++ .++.......+++..
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~A~~~~~~~~l~~l 192 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAKG-----ARTDLRNIEKKLAFDMATNAACASLLKKK 192 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHHT-----CCSCCCCTTSCCHHHHCCSHHHHHHHC--
T ss_pred HHHHHHHcCCHHHHHHHHHcC-----CCCccccCCCCCHHHHhcchhHHHHHHHH
Confidence 999999999999999999998 7899999999666 444444444444333
No 106
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.76 E-value=1.7e-18 Score=193.16 Aligned_cols=108 Identities=23% Similarity=0.225 Sum_probs=102.9
Q ss_pred HHHHHHhCCCCCCc------ccCCCCcHHHHHHHc---CCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHH
Q 001365 695 LVQKAAEGGKGPCV------LDHCGQGVLHFAAAL---GYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASL 765 (1092)
Q Consensus 695 LvklLle~GadvN~------~D~~G~TpLH~AA~~---G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~L 765 (1092)
.++.|++.|++++. .|..|.||||+||.. |+.++|++||++|+++|.+|..|+||||+||..|+.++|++|
T Consensus 166 ~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~L 245 (301)
T 2b0o_E 166 SVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLL 245 (301)
T ss_dssp HHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 56667899999998 699999999999997 899999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 001365 766 IALGAAPGALSDPTPKYPSGRTPADLASSIGHKGIAGYLAESD 808 (1092)
Q Consensus 766 Le~GAdin~~~D~n~~D~~G~TPLhlAa~~G~~eiv~~LLe~G 808 (1092)
|++||++++ +|..|.||||+|+..|+.+++++|+++|
T Consensus 246 l~~gad~~~------~d~~G~TpL~~A~~~~~~~iv~~Ll~~g 282 (301)
T 2b0o_E 246 LKGRALVGT------VNEAGETALDIARKKHHKECEELLEQAQ 282 (301)
T ss_dssp HHTTCCCSC------CCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHcCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHhc
Confidence 999999887 7899999999999999999999999988
No 107
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.75 E-value=2.2e-18 Score=176.65 Aligned_cols=111 Identities=22% Similarity=0.153 Sum_probs=102.8
Q ss_pred ccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC-CCCCC
Q 001365 709 LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKY-PSGRT 787 (1092)
Q Consensus 709 ~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D-~~G~T 787 (1092)
.+..|.||||+||..|+.++|+.|++ |+++|.+|..|+||||+||..|+.++|++|+++|+++|. +| ..|+|
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------~~~~~g~t 112 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH------RDMRGGLT 112 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC------CCSSSSCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------CCCCCCCC
Confidence 35678999999999999999999999 999999999999999999999999999999999999987 55 88999
Q ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcHHHHhh
Q 001365 788 PADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 831 (1092)
Q Consensus 788 PLhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta~iaa~ 831 (1092)
|||+|+..|+.+++++|+++| ++++.+|..|.|+...+.
T Consensus 113 pL~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~tpl~~A~ 151 (183)
T 3deo_A 113 ALHMAAGYVRPEVVEALVELG-----ADIEVEDERGLTALELAR 151 (183)
T ss_dssp HHHHHHHTTCHHHHHHHHHHT-----CCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHhcCcHHHHHHHHHcC-----CCCcCCCCCCCCHHHHHH
Confidence 999999999999999999998 789999999977755444
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.74 E-value=7.2e-18 Score=193.66 Aligned_cols=150 Identities=15% Similarity=0.099 Sum_probs=112.4
Q ss_pred ccChHHHHHHHc-CCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcHHh
Q 001365 537 QEAENCKWSCMF-GEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDITSE 615 (1092)
Q Consensus 537 ~~~TpLH~A~~f-G~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~TpL~ 615 (1092)
...|+||+||.. |++++++.||+.|++++....+..|.||||+||..|+ +.
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~----~~------------------------ 249 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANS----LL------------------------ 249 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTC----HH------------------------
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCC----HH------------------------
Confidence 345799999999 9999999999999998865544779999999997763 11
Q ss_pred hhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHH
Q 001365 616 NLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWL 695 (1092)
Q Consensus 616 ~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~L 695 (1092)
+
T Consensus 250 -------------------------------------------------------------------------------i 250 (368)
T 3jue_A 250 -------------------------------------------------------------------------------A 250 (368)
T ss_dssp -------------------------------------------------------------------------------H
T ss_pred -------------------------------------------------------------------------------H
Confidence 4
Q ss_pred HHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 001365 696 VQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGAL 775 (1092)
Q Consensus 696 vklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~ 775 (1092)
+++|+++|+++|.+|..|+||||+|+..|+.++|++||++|++++.+|..|+||||+|+..|+.++|++|+..|.....
T Consensus 251 v~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~- 329 (368)
T 3jue_A 251 CEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAE- 329 (368)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccc-
Confidence 4556777889999999999999999999999999999999999999999999999999999999999999988754322
Q ss_pred CCCCCCCCCCCCHHHHHHHcC
Q 001365 776 SDPTPKYPSGRTPADLASSIG 796 (1092)
Q Consensus 776 ~D~n~~D~~G~TPLhlAa~~G 796 (1092)
....+..+.|+|+++....
T Consensus 330 --~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 330 --AAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp ---------------------
T ss_pred --ccccCCCCCCHHHHHHHHH
Confidence 2335678899999877654
No 109
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.72 E-value=1e-17 Score=180.29 Aligned_cols=110 Identities=22% Similarity=0.149 Sum_probs=102.1
Q ss_pred cCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC-CCCCCH
Q 001365 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKY-PSGRTP 788 (1092)
Q Consensus 710 D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D-~~G~TP 788 (1092)
+..|.||||+||..|+.++|+.||+ |+++|.+|..|+||||+||..|+.++|++||++|+++|. +| ..|+||
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------~~~~~g~t~ 114 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH------RDMRGGLTA 114 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC------CCSSSCCCH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCc------CCCCCCCCH
Confidence 4568999999999999999999999 999999999999999999999999999999999999987 55 789999
Q ss_pred HHHHHHcCcHHHHHHHHHcCCCCCcccCcccCCCCCcHHHHhh
Q 001365 789 ADLASSIGHKGIAGYLAESDLSSALSAISLNKKDGDVAEVTGA 831 (1092)
Q Consensus 789 LhlAa~~G~~eiv~~LLe~Ga~~h~adlnlkD~~G~ta~iaa~ 831 (1092)
||+|+..|+.+++++|+++| ++++.+|..|.|+...+.
T Consensus 115 L~~A~~~g~~~~v~~Ll~~g-----a~~~~~d~~g~t~l~~A~ 152 (244)
T 3ui2_A 115 LHMAAGYVRPEVVEALVELG-----ADIEVEDERGLTALELAR 152 (244)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCC-----CCCCCCCCCCCcHHHHHH
Confidence 99999999999999999998 789999999987755544
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.72 E-value=3e-17 Score=180.92 Aligned_cols=131 Identities=12% Similarity=0.014 Sum_probs=112.7
Q ss_pred cChHHHHHHHcCCcHHHHHHHHCCCCCC----CCCCCCCCchHHHHHHHcCCCchhHHHHHHHHhCCCCcccccCCCCcH
Q 001365 538 EAENCKWSCMFGEIEVPAEIVAGGVLRC----HTSSQKVGRVPFYVTCSNRLSCSEVREFEYRASHIPDVDVADNCGDIT 613 (1092)
Q Consensus 538 ~~TpLH~A~~fG~veVv~~LL~~Gadin----~~~~d~~G~TPLHlAa~ng~~~seVv~fe~Ll~~Gadvna~D~~G~Tp 613 (1092)
..++|+.|+..|+++.+..+++.|++++ ....+..|.||||+||..+..
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~--------------------------- 182 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDR--------------------------- 182 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCT---------------------------
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhccc---------------------------
Confidence 3578999999999999999999999866 223467789999999876410
Q ss_pred HhhhHHHHHHHHhcCCCCCCCCCCCCchhhHHHHHHHhhhhccCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHH
Q 001365 614 SENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSKISSLLKDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQV 693 (1092)
Q Consensus 614 L~~~~~~lvkLLl~gadv~~~~~~~~~~~~~~ll~~I~~Ll~~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~ 693 (1092)
+. .
T Consensus 183 ---------------------------------------------------------~~--------------------~ 185 (278)
T 1dcq_A 183 ---------------------------------------------------------TS--------------------L 185 (278)
T ss_dssp ---------------------------------------------------------TT--------------------H
T ss_pred ---------------------------------------------------------ch--------------------H
Confidence 00 0
Q ss_pred HHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCC
Q 001365 694 WLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAP 772 (1092)
Q Consensus 694 ~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdi 772 (1092)
-++++|+++|+++|.+|..|+||||+||..|+.++|++||++|++++.+|..|+||||+|+..|+.++|++|+++|++.
T Consensus 186 ~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 186 HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 0566778889999999999999999999999999999999999999999999999999999999999999999999975
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.72 E-value=1.6e-17 Score=151.33 Aligned_cols=93 Identities=28% Similarity=0.296 Sum_probs=85.3
Q ss_pred CcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCC
Q 001365 659 DDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN 738 (1092)
Q Consensus 659 ~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gad 738 (1092)
+|+||||.|+..+... ++++|++.|+++|.+|..|+||||+|+..|+.++|++|+++|++
T Consensus 1 ~g~t~L~~A~~~~~~~--------------------~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 60 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLE--------------------VVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60 (93)
T ss_dssp --CCHHHHHHHHTCHH--------------------HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCcHHHHHHHcCCHH--------------------HHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 3678898888766542 78889999999999999999999999999999999999999999
Q ss_pred ccccCCCCccHHHHHHHcCCHHHHHHHHHcCCC
Q 001365 739 INFRDVNGWTALHWAAYCGRERTVASLIALGAA 771 (1092)
Q Consensus 739 in~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAd 771 (1092)
++.+|..|+||||+|+..|+.++|++|+++||+
T Consensus 61 ~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 61 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999985
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.71 E-value=2.3e-17 Score=155.57 Aligned_cols=93 Identities=28% Similarity=0.262 Sum_probs=85.7
Q ss_pred CCcccCCCCcHHHHHHHcCCHhHHHHHHHCCCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 001365 706 PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSG 785 (1092)
Q Consensus 706 vN~~D~~G~TpLH~AA~~G~~~iVk~LL~~Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G 785 (1092)
++..|.+|.||||+||..|+.++|++|+++|++++.+|..|+||||+||..|+.++|++|+++|++++. +|..|
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~------~d~~g 90 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA------QDKFG 90 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTS
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc------cccCC
Confidence 445788999999999999999999999999999999999999999999999999999999999999887 77999
Q ss_pred CCHHHHHHHcCcHHHHHHH
Q 001365 786 RTPADLASSIGHKGIAGYL 804 (1092)
Q Consensus 786 ~TPLhlAa~~G~~eiv~~L 804 (1092)
+||||+|+..|+.+++++|
T Consensus 91 ~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 91 KTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHh
Confidence 9999999999999999987
No 113
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.68 E-value=1.4e-17 Score=157.02 Aligned_cols=108 Identities=22% Similarity=0.165 Sum_probs=97.5
Q ss_pred cCCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHC
Q 001365 656 DENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA 735 (1092)
Q Consensus 656 ~d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~ 735 (1092)
.+..|+++||.|+..+... +++.|+++|++++.+|..|.||||+|+..|+.+++++|+++
T Consensus 5 ~d~~g~t~L~~A~~~~~~~--------------------~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ 64 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAE--------------------EVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAK 64 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHH--------------------HHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTT
T ss_pred cCCCCCCHHHHHHHcCCHH--------------------HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 3578999999998876643 77889999999999999999999999999999999999999
Q ss_pred CCCccccCCCCccHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHH
Q 001365 736 GVNINFRDVNGWTALHWAAYCGRERTVASLIALGAAPGALSDPTPKYPSGRTPA 789 (1092)
Q Consensus 736 Gadin~~D~~G~TpLH~Aa~~G~~eiV~~LLe~GAdin~~~D~n~~D~~G~TPL 789 (1092)
|++++.+|..|+||||+|+..|+.+++++|+++|+++|. ++..|.||-
T Consensus 65 g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~------~~~~~~~~~ 112 (115)
T 2l6b_A 65 GADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNA------RSWGSSHHH 112 (115)
T ss_dssp TCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHH------HSCCCC---
T ss_pred CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCc------CCccccccc
Confidence 999999999999999999999999999999999999988 667888873
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.53 E-value=1.7e-14 Score=135.91 Aligned_cols=89 Identities=22% Similarity=0.159 Sum_probs=81.9
Q ss_pred CCCcchHHHHhhhhcCCChHHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHcCCHhHHHHHHHCC
Q 001365 657 ENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAG 736 (1092)
Q Consensus 657 d~~g~t~L~~a~~~~~~s~~~~~~~lL~~a~k~~l~~~LvklLle~GadvN~~D~~G~TpLH~AA~~G~~~iVk~LL~~G 736 (1092)
+.+++++||.|+..+... +++.|++.|+++|.+|..|.||||+||..|+.++|++|+++|
T Consensus 21 ~~~g~t~L~~A~~~g~~~--------------------~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g 80 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDD--------------------EVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG 80 (110)
T ss_dssp -CCHHHHHHHHHHHTCHH--------------------HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCccchHHHHHHHcCCHH--------------------HHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 468888998888766543 778899999999999999999999999999999999999999
Q ss_pred CCccccCCCCccHHHHHHHcCCHHHHHHH
Q 001365 737 VNINFRDVNGWTALHWAAYCGRERTVASL 765 (1092)
Q Consensus 737 adin~~D~~G~TpLH~Aa~~G~~eiV~~L 765 (1092)
++++.+|..|+||||+|+..|+.+++++|
T Consensus 81 a~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 81 ADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999999987
No 115
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.50 E-value=2.1e-14 Score=183.86 Aligned_cols=144 Identities=23% Similarity=0.273 Sum_probs=76.9
Q ss_pred HHHHHHHHHHhhhhhhhHHHHhhhcCCCCCCchHHHhHHHH-HHh---cCCCCCchhHHHHHHHHHHHhhhHHHHHHHHH
Q 001365 867 TQAAARIHQVFRVQSFQKKQLKEYGNDTFGISDERALSLVA-VKT---QKPGHHDEPVHAAATRIQNKFRSWKGRKDFLI 942 (1092)
Q Consensus 867 ~qAAarIQqafR~~S~rrkq~~~~~~d~~~~~~e~a~sl~a-~k~---~~~~r~~~~l~~AA~~IQ~~~Rg~~~Rk~fl~ 942 (1092)
..+|..||..+|++..+++-... ...+..+.+ .|. ++..+ ......||+.||+.||||+.|+.|..
T Consensus 768 ~~aa~~IQa~~Rg~l~Rk~~~~~---------r~aai~IQ~~~Rg~~aR~~~~-~lr~~~AAi~IQs~~Rg~~~Rk~y~~ 837 (1080)
T 2dfs_A 768 RAACIRIQKTIRGWLMRKKYMRM---------RRAAITIQRYVRGHQARCYAT-FLRRTRAAIIIQKFQRMYVVRKRYQC 837 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhh---------HHHHHHHHHHHHHHHHhhccc-ccccchhHHHHHHHHhhHHHHHHHHH
Confidence 35788999999998877552211 000111110 000 00000 01134455555555555555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhcccccccccccccccccccccCCccchHHHHHHHHHH
Q 001365 943 IRKQIIKIQAYVRGHQVRKNYKKIIW--SVGIMEKIILRWRRRGSGLRGFKSETLTASSSMVATSAKEDDYDFLKEGRKQ 1020 (1092)
Q Consensus 943 ~r~~av~IQa~~Rg~~aRk~y~~~~~--a~~~iqk~irr~r~kr~glrg~~~~~~~~~~~~~~~~~~~~~~~~~~~~rkq 1020 (1092)
+|.+++.||++|||+++|++|+.++. ++.+||+.+|+|+.|+.
T Consensus 838 lr~aai~IQs~~Rg~laRr~~~~lr~~~aav~IQ~~~Rg~l~R~~----------------------------------- 882 (1080)
T 2dfs_A 838 MRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVH----------------------------------- 882 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHH-----------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------
Confidence 55555555555555555555554442 44555555554433322
Q ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Q 001365 1021 KEERLQKALARVKSMVQYPEARDQYRRLLNVVNEIQ 1056 (1092)
Q Consensus 1021 ~~~~~~~A~~~vQs~~R~~~AR~~yrrl~~~~~~~~ 1056 (1092)
+.+.++|+++||++||++.||++|++|+.+++...
T Consensus 883 -y~~~~~aai~iQs~~R~~laRr~~~~Lk~ear~~~ 917 (1080)
T 2dfs_A 883 -YHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVE 917 (1080)
T ss_dssp -TTTTHHHHHHHHHHHHHHHHHHHTTTC--------
T ss_pred -HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 33456899999999999999999999988876544
No 116
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.44 E-value=1.9e-13 Score=175.09 Aligned_cols=125 Identities=26% Similarity=0.267 Sum_probs=97.4
Q ss_pred hhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhcccccccccccc
Q 001365 918 EPVHAAATRIQNKFRSWKGRKDFLIIRKQIIKIQAYVRGHQVRKNYKKII--WSVGIMEKIILRWRRRGSGLRGFKSETL 995 (1092)
Q Consensus 918 ~~l~~AA~~IQ~~~Rg~~~Rk~fl~~r~~av~IQa~~Rg~~aRk~y~~~~--~a~~~iqk~irr~r~kr~glrg~~~~~~ 995 (1092)
+.++.+|+.||+.||||+.|++|+++|.+++.||++|||+++|++|..++ +||.+||+.||+|+.|+...+- +...
T Consensus 765 ~~l~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~lr~~~AAi~IQs~~Rg~~~Rk~y~~l-r~aa- 842 (1080)
T 2dfs_A 765 DKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCM-RDAT- 842 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHhhHHHHHHHHHH-HHHH-
Confidence 45788999999999999999999999999999999999999999987654 6999999999999988744321 1000
Q ss_pred cccccccccCCccchHHHHHHHHHHH---HHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Q 001365 996 TASSSMVATSAKEDDYDFLKEGRKQK---EERLQKALARVKSMVQYPEARDQYRRLLNVVNEIQ 1056 (1092)
Q Consensus 996 ~~~~~~~~~~~~~~~~~~~~~~rkq~---~~~~~~A~~~vQs~~R~~~AR~~yrrl~~~~~~~~ 1056 (1092)
-.++.++|.++.++ ..+.++|+++||++||+..+|+.|++++.++..+|
T Consensus 843 ------------i~IQs~~Rg~laRr~~~~lr~~~aav~IQ~~~Rg~l~R~~y~~~~~aai~iQ 894 (1080)
T 2dfs_A 843 ------------IALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQ 894 (1080)
T ss_dssp ------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHTTTTHHHHHHHH
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 12344444432222 22345699999999999999999998877766665
No 117
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=99.08 E-value=2.2e-10 Score=96.96 Aligned_cols=51 Identities=37% Similarity=0.563 Sum_probs=47.8
Q ss_pred hhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001365 918 EPVHAAATRIQNKFRSWKGRKDFLIIRKQIIKIQAYVRGHQVRKNYKKIIW 968 (1092)
Q Consensus 918 ~~l~~AA~~IQ~~~Rg~~~Rk~fl~~r~~av~IQa~~Rg~~aRk~y~~~~~ 968 (1092)
+.++.||+.||+.||||..|+.|+.++.+++.||++|||+++|+.|..++.
T Consensus 2 ~~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~~r~ 52 (58)
T 2ix7_C 2 DKLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRR 52 (58)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999999999999999999999999999988863
No 118
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.82 E-value=5.9e-09 Score=84.74 Aligned_cols=44 Identities=27% Similarity=0.290 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Q 001365 920 VHAAATRIQNKFRSWKGRKDFLIIRK--QIIKIQAYVRGHQVRKNY 963 (1092)
Q Consensus 920 l~~AA~~IQ~~~Rg~~~Rk~fl~~r~--~av~IQa~~Rg~~aRk~y 963 (1092)
+..+++.||+.+|||..|+.|..+++ ++++||++||||.+|+.|
T Consensus 2 ~r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y 47 (48)
T 1n2d_C 2 ISQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV 47 (48)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence 45789999999999999999999998 999999999999999987
No 119
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=98.61 E-value=2.7e-11 Score=112.79 Aligned_cols=84 Identities=38% Similarity=0.739 Sum_probs=73.1
Q ss_pred ceEEEeeccccccCCCCeeEEEEecCcCCcccChHHHHHHHcCCcHHHHHHHHCCCCCCCCCCCCCCchHHHHHHHcCCC
Q 001365 507 LYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLS 586 (1092)
Q Consensus 507 ~fsI~dfSP~wa~s~~~tKVlI~G~fl~~~~~~TpLH~A~~fG~veVv~~LL~~Gadin~~~~d~~G~TPLHlAa~ng~~ 586 (1092)
.+.|+||+|+|++..|+|||+|+|.|+.... +|.|+||+.+++..+++.|+.+|.+|++..|..||++.+.+..
T Consensus 6 ~~~Itd~sP~~gp~sGGTkv~I~G~~L~~gs-----~~~~~fG~~~vpa~~~s~~vl~C~tPp~~~G~v~~~v~~d~~~- 79 (95)
T 2cxk_A 6 SGMVTDYSPEWSYPEGGVKVLITGPWQEASN-----NYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQI- 79 (95)
T ss_dssp CSCCCEEECSEECTTCCCEEEEESSCCCCSS-----CEEEEETTEEEECEEEETTEEEEECCCCCSEEEEEEEEETTEE-
T ss_pred cEEEEEECCCcccCCCCEEEEEEeECCCCCc-----cEEEEECCEEEeEEEeECCEEEEEecCCCCceEeEEEEECCee-
Confidence 5689999999999999999999999997653 5999999999888889999999999999999999999987654
Q ss_pred chhHHHHHHH
Q 001365 587 CSEVREFEYR 596 (1092)
Q Consensus 587 ~seVv~fe~L 596 (1092)
+++...|+|.
T Consensus 80 ~s~~~~FeY~ 89 (95)
T 2cxk_A 80 ISNSVVFEYK 89 (95)
T ss_dssp CSCCEEEEEC
T ss_pred cCCceEEEEe
Confidence 4666666554
No 120
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=98.59 E-value=1.1e-07 Score=80.41 Aligned_cols=49 Identities=31% Similarity=0.331 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccCCccchHHHHHHHHHHH
Q 001365 942 IIRKQIIKIQAYVRGHQVRKNYKKIIWSVGIMEKIILRWRRRGSGLRGFKSETLTASSSMVATSAKEDDYDFLKEGRKQK 1021 (1092)
Q Consensus 942 ~~r~~av~IQa~~Rg~~aRk~y~~~~~a~~~iqk~irr~r~kr~glrg~~~~~~~~~~~~~~~~~~~~~~~~~~~~rkq~ 1021 (1092)
++..+++.||++||||++|++|+.++
T Consensus 3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r------------------------------------------------------ 28 (58)
T 2ix7_C 3 KLRAACIRIQKTIRGWLLRKRYLCMQ------------------------------------------------------ 28 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------------------------------
Confidence 35678999999999999999998763
Q ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHH
Q 001365 1022 EERLQKALARVKSMVQYPEARDQYRRLL 1049 (1092)
Q Consensus 1022 ~~~~~~A~~~vQs~~R~~~AR~~yrrl~ 1049 (1092)
+|++.||++|||..||+.|+.|+
T Consensus 29 -----~aai~IQ~~~Rg~~aR~~~~~~r 51 (58)
T 2ix7_C 29 -----RAAITVQRYVRGYQARCYAKFLR 51 (58)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788888888888988888884
No 121
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.34 E-value=5.1e-07 Score=73.24 Aligned_cols=43 Identities=14% Similarity=0.228 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhcc
Q 001365 943 IRKQIIKIQAYVRGHQVRKNYKKIIW--SVGIMEKIILRWRRRGS 985 (1092)
Q Consensus 943 ~r~~av~IQa~~Rg~~aRk~y~~~~~--a~~~iqk~irr~r~kr~ 985 (1092)
++.+++.||++|||+++|++|..+++ |+.+||+.+|+|..++.
T Consensus 2 ~r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~ 46 (48)
T 1n2d_C 2 ISQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRAN 46 (48)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHh
Confidence 57899999999999999999999887 99999999999987764
No 122
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=97.58 E-value=0.00014 Score=62.55 Aligned_cols=47 Identities=26% Similarity=0.338 Sum_probs=40.7
Q ss_pred chhHHHHHHHHHHHhhhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Q 001365 917 DEPVHAAATRIQNKFRSWKGRKDFLII---RKQIIKIQAYVRGHQVRKNY 963 (1092)
Q Consensus 917 ~~~l~~AA~~IQ~~~Rg~~~Rk~fl~~---r~~av~IQa~~Rg~~aRk~y 963 (1092)
++.+...++.||+..|||..|++|.++ +.++..||.++|+|..++..
T Consensus 2 d~~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~w 51 (64)
T 1wdc_A 2 DERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW 51 (64)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 567788899999999999999999998 67778999999999998754
No 123
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=97.39 E-value=0.00011 Score=92.04 Aligned_cols=49 Identities=22% Similarity=0.266 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHHhhhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
Q 001365 918 EPVHAAATRIQNKFRSWKGRKDFLII---RKQIIKIQAYVRGHQVRKNYKKI 966 (1092)
Q Consensus 918 ~~l~~AA~~IQ~~~Rg~~~Rk~fl~~---r~~av~IQa~~Rg~~aRk~y~~~ 966 (1092)
+.+..+|+.||+.+|||+.||+|+++ |.++++||++||||++||+|.-+
T Consensus 776 ~~l~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~~w~ 827 (837)
T 1kk8_A 776 ERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQWW 827 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHHH
Confidence 56788899999999999999999999 67899999999999999987544
No 124
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=97.36 E-value=0.00023 Score=60.97 Aligned_cols=45 Identities=24% Similarity=0.273 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHhhhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Q 001365 919 PVHAAATRIQNKFRSWKGRKDFLII---RKQIIKIQAYVRGHQVRKNY 963 (1092)
Q Consensus 919 ~l~~AA~~IQ~~~Rg~~~Rk~fl~~---r~~av~IQa~~Rg~~aRk~y 963 (1092)
.+...++.||+..|||..|++|.++ +.++..||+++|+|..++..
T Consensus 2 ~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w 49 (63)
T 2bl0_A 2 RIGEIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNW 49 (63)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 3556777888888888888888888 66677888888888887643
No 125
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=97.25 E-value=0.00048 Score=59.03 Aligned_cols=43 Identities=23% Similarity=0.250 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhc
Q 001365 942 IIRKQIIKIQAYVRGHQVRKNYKKI---IWSVGIMEKIILRWRRRG 984 (1092)
Q Consensus 942 ~~r~~av~IQa~~Rg~~aRk~y~~~---~~a~~~iqk~irr~r~kr 984 (1092)
++...++.||+++||+++|+.|+++ +.|+.+||+.+|.|...+
T Consensus 2 ~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr 47 (63)
T 2bl0_A 2 RIGEIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFK 47 (63)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3556789999999999999999998 568889999999987655
No 126
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=97.24 E-value=0.0006 Score=58.55 Aligned_cols=43 Identities=30% Similarity=0.477 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhc
Q 001365 942 IIRKQIIKIQAYVRGHQVRKNYKKI---IWSVGIMEKIILRWRRRG 984 (1092)
Q Consensus 942 ~~r~~av~IQa~~Rg~~aRk~y~~~---~~a~~~iqk~irr~r~kr 984 (1092)
++...++.||+++||+++|+.|+++ +.|+.+||+.+|.|...+
T Consensus 4 ~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~ 49 (64)
T 1wdc_A 4 RLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 49 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4567799999999999999999998 568889999999887654
No 127
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=97.21 E-value=0.001 Score=87.01 Aligned_cols=49 Identities=20% Similarity=0.221 Sum_probs=40.5
Q ss_pred hhHHHHHHHHHHHhhhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Q 001365 918 EPVHAAATRIQNKFRSWKGRKDFLIIR---KQIIKIQAYVRGHQVRKNYKKI 966 (1092)
Q Consensus 918 ~~l~~AA~~IQ~~~Rg~~~Rk~fl~~r---~~av~IQa~~Rg~~aRk~y~~~ 966 (1092)
+.+..+++.||+.+|||+.|++|.+++ .+++.||++||+|++||.|..+
T Consensus 789 ~~l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~~~~ 840 (1184)
T 1i84_S 789 LKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHWPWM 840 (1184)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 346678899999999999999999885 5788999999999999876443
No 128
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=96.56 E-value=0.0032 Score=79.08 Aligned_cols=46 Identities=28% Similarity=0.391 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhc
Q 001365 939 DFLIIRKQIIKIQAYVRGHQVRKNYKKI---IWSVGIMEKIILRWRRRG 984 (1092)
Q Consensus 939 ~fl~~r~~av~IQa~~Rg~~aRk~y~~~---~~a~~~iqk~irr~r~kr 984 (1092)
+-.++.+.++.||++||||++||+|+++ +.|+.+||+.+|+|..+|
T Consensus 774 r~~~l~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r 822 (837)
T 1kk8_A 774 RDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 822 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3456677899999999999999999998 578899999999998776
No 129
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=96.08 E-value=0.0093 Score=78.08 Aligned_cols=50 Identities=24% Similarity=0.171 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhcc
Q 001365 936 GRKDFLIIRKQIIKIQAYVRGHQVRKNYKKII---WSVGIMEKIILRWRRRGS 985 (1092)
Q Consensus 936 ~Rk~fl~~r~~av~IQa~~Rg~~aRk~y~~~~---~a~~~iqk~irr~r~kr~ 985 (1092)
...+-.++...++.||++||||++|++|++++ .|+.+||+.||+|..+|.
T Consensus 784 E~~r~~~l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~ 836 (1184)
T 1i84_S 784 EEERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXH 836 (1184)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33344566778999999999999999999885 588899999999988874
No 130
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=94.80 E-value=0.067 Score=53.12 Aligned_cols=32 Identities=19% Similarity=0.122 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001365 944 RKQIIKIQAYVRGHQVRKNYKKIIWSVGIMEK 975 (1092)
Q Consensus 944 r~~av~IQa~~Rg~~aRk~y~~~~~a~~~iqk 975 (1092)
+.++|+||+.+|||++||+|+-.+.+...+..
T Consensus 45 ~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~ 76 (148)
T 3gn4_A 45 AEACIKMQKTIRMWLCKRRHKPRIDGLVKVGT 76 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 45789999999999999999888766654433
No 131
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=94.75 E-value=0.033 Score=71.44 Aligned_cols=45 Identities=7% Similarity=0.027 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001365 919 PVHAAATRIQNKFRSWKGRKDFLIIRKQIIKIQAYVRGHQVRKNYK 964 (1092)
Q Consensus 919 ~l~~AA~~IQ~~~Rg~~~Rk~fl~~r~~av~IQa~~Rg~~aRk~y~ 964 (1092)
.+..+|+.||+ +|||..|++|+++|++++.||..+|++..|+.+.
T Consensus 773 ~~~~~~~~iq~-~r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~~~~ 817 (1052)
T 4anj_A 773 DPDHLAELVKR-VNHWLICSRWKKVQWCSLSVIKLKNKIKYRAEAV 817 (1052)
T ss_dssp CHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 46677777775 7999999999999999999999999988776543
No 132
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=89.06 E-value=0.29 Score=61.17 Aligned_cols=31 Identities=29% Similarity=0.387 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001365 940 FLIIRKQIIKIQAYVRGHQVRKNYKKIIWSV 970 (1092)
Q Consensus 940 fl~~r~~av~IQa~~Rg~~aRk~y~~~~~a~ 970 (1092)
-.++.+.++.||++||||++||+|++++.|+
T Consensus 764 ~~~l~~~~~~iQ~~~Rg~l~R~~~~~~r~a~ 794 (795)
T 1w7j_A 764 ADKLRAACIRIQKTIRGWLMRKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3456678999999999999999999987654
No 133
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=86.04 E-value=0.3 Score=61.05 Aligned_cols=31 Identities=32% Similarity=0.591 Sum_probs=26.3
Q ss_pred chhHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 001365 917 DEPVHAAATRIQNKFRSWKGRKDFLIIRKQI 947 (1092)
Q Consensus 917 ~~~l~~AA~~IQ~~~Rg~~~Rk~fl~~r~~a 947 (1092)
.+.+..+|+.||+.+|||+.||+|+++|+++
T Consensus 764 ~~~l~~~~~~iQ~~~Rg~l~R~~~~~~r~a~ 794 (795)
T 1w7j_A 764 ADKLRAACIRIQKTIRGWLMRKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3457889999999999999999999999865
No 134
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=85.64 E-value=0.7 Score=59.41 Aligned_cols=35 Identities=14% Similarity=0.127 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001365 943 IRKQIIKIQAYVRGHQVRKNYKKIIWSVGIMEKIIL 978 (1092)
Q Consensus 943 ~r~~av~IQa~~Rg~~aRk~y~~~~~a~~~iqk~ir 978 (1092)
+.+.++.|| .+|||++||+|+++++++..||+..|
T Consensus 774 ~~~~~~~iq-~~r~~l~r~~~~k~~~~a~~i~~~~r 808 (1052)
T 4anj_A 774 PDHLAELVK-RVNHWLICSRWKKVQWCSLSVIKLKN 808 (1052)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556566 68999999999999999998888655
No 135
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=84.65 E-value=0.6 Score=34.30 Aligned_cols=20 Identities=25% Similarity=0.252 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHhhhHHHHHH
Q 001365 920 VHAAATRIQNKFRSWKGRKD 939 (1092)
Q Consensus 920 l~~AA~~IQ~~~Rg~~~Rk~ 939 (1092)
..-+|+.||+.||+|+.|+.
T Consensus 5 Ee~aA~vIQrA~R~yl~rr~ 24 (31)
T 2l53_B 5 EEVSAMVIQRAFRRHLLQRS 24 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 34678888888888887765
No 136
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=83.82 E-value=0.55 Score=33.44 Aligned_cols=18 Identities=22% Similarity=0.361 Sum_probs=12.7
Q ss_pred HHHHHHHHHHhhhHHHHH
Q 001365 921 HAAATRIQNKFRSWKGRK 938 (1092)
Q Consensus 921 ~~AA~~IQ~~~Rg~~~Rk 938 (1092)
..||+.||+.||+|+.|+
T Consensus 6 e~aA~vIQrA~R~yl~~~ 23 (27)
T 2kxw_B 6 EVSAIVIQRAYRRYLLKQ 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 457777787777777654
No 137
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=83.13 E-value=0.76 Score=33.75 Aligned_cols=18 Identities=22% Similarity=0.325 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 001365 945 KQIIKIQAYVRGHQVRKN 962 (1092)
Q Consensus 945 ~~av~IQa~~Rg~~aRk~ 962 (1092)
.+|+.||..||+|+.|+.
T Consensus 7 ~aA~vIQrA~R~yl~rr~ 24 (31)
T 2l53_B 7 VSAMVIQRAFRRHLLQRS 24 (31)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 478999999999999874
No 138
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=82.28 E-value=0.7 Score=32.90 Aligned_cols=17 Identities=24% Similarity=0.172 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHH
Q 001365 945 KQIIKIQAYVRGHQVRK 961 (1092)
Q Consensus 945 ~~av~IQa~~Rg~~aRk 961 (1092)
.+|+.||..||+|+.|+
T Consensus 7 ~aA~vIQrA~R~yl~~~ 23 (27)
T 2kxw_B 7 VSAIVIQRAYRRYLLKQ 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 57899999999999875
No 139
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=80.70 E-value=7.7 Score=38.51 Aligned_cols=22 Identities=5% Similarity=0.078 Sum_probs=17.7
Q ss_pred HHHHHHHHhhccHHHHHHHHHH
Q 001365 1027 KALARVKSMVQYPEARDQYRRL 1048 (1092)
Q Consensus 1027 ~A~~~vQs~~R~~~AR~~yrrl 1048 (1092)
+|+++||+.+|++.||+.|+--
T Consensus 46 ~~~i~iQktvR~~L~rkkhkPR 67 (148)
T 3gn4_A 46 EACIKMQKTIRMWLCKRRHKPR 67 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhH
Confidence 5678888888888888888755
No 140
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=59.61 E-value=6.1 Score=50.73 Aligned_cols=55 Identities=16% Similarity=0.136 Sum_probs=41.8
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH
Q 001365 923 AATRIQNKFRSWKGRKDFLIIRKQIIKIQAYVRGHQVRKNYKKIIWS--VGIMEKII 977 (1092)
Q Consensus 923 AA~~IQ~~~Rg~~~Rk~fl~~r~~av~IQa~~Rg~~aRk~y~~~~~a--~~~iqk~i 977 (1092)
-|..++.++|+...+.+++.++.+++.||+.+||++.++++.+..+. ...|+..+
T Consensus 766 ~a~~Ll~WIr~k~a~l~~r~~~~sl~~IQ~~ir~f~~fr~~ekpp~~~ek~rLeal~ 822 (995)
T 2ycu_A 766 RANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIY 822 (995)
T ss_dssp HHHHHHHHTTTTTCCCSCHHHHHHHHHHHHHHHHHTTHHHHTHHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 35566777888777888889999999999999999999888776543 44555443
No 141
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.85 E-value=7.6 Score=37.65 Aligned_cols=30 Identities=23% Similarity=0.636 Sum_probs=23.1
Q ss_pred EEeeccccccccccceeeeccccccccEEEEe
Q 001365 100 HCYYAHGEENENFQRRSYWMLEEELSHIVLVH 131 (1092)
Q Consensus 100 ~~~y~~~~~~~~f~rr~y~~~~~~~~~ivlvh 131 (1092)
-.|-+|--..-+-.||-||.||.. .|.|.+
T Consensus 11 eGWmVH~t~~d~~rKRHYWrLD~K--~Itlf~ 40 (129)
T 2d9z_A 11 EGWMVHYTSRDNLRKRHYWRLDSK--CLTLFQ 40 (129)
T ss_dssp EEEEEEEESSCCCCEEEEEEEESS--CEEEES
T ss_pred cceEEEEccCCccccceeeEecCC--eEEEEe
Confidence 467788666566799999999987 577754
No 142
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=42.23 E-value=14 Score=37.38 Aligned_cols=23 Identities=22% Similarity=0.186 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHH
Q 001365 920 VHAAATRIQNKFRSWKGRKDFLI 942 (1092)
Q Consensus 920 l~~AA~~IQ~~~Rg~~~Rk~fl~ 942 (1092)
...||..||+.||.|+.|+.+..
T Consensus 129 e~~aA~~IQra~R~~~~r~~~~~ 151 (168)
T 4dck_A 129 EEVSAMVIQRAFRRHLLQRSLKH 151 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccc
Confidence 34588888888888877766543
No 143
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=32.98 E-value=28 Score=35.29 Aligned_cols=21 Identities=24% Similarity=0.339 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 001365 945 KQIIKIQAYVRGHQVRKNYKK 965 (1092)
Q Consensus 945 ~~av~IQa~~Rg~~aRk~y~~ 965 (1092)
.+|+.||.+||.|+.|+.++.
T Consensus 131 ~aA~~IQra~R~~~~r~~~~~ 151 (168)
T 4dck_A 131 VSAMVIQRAFRRHLLQRSLKH 151 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccc
Confidence 478999999999999987655
No 144
>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana}
Probab=24.65 E-value=21 Score=31.62 Aligned_cols=8 Identities=63% Similarity=1.344 Sum_probs=7.3
Q ss_pred ccCcccee
Q 001365 70 KDGHNWRK 77 (1092)
Q Consensus 70 ~dg~~w~k 77 (1092)
.|||+|||
T Consensus 15 ~DGy~WRK 22 (76)
T 2ayd_A 15 NDGYRWRK 22 (76)
T ss_dssp CCSSCEEE
T ss_pred CCCchhhh
Confidence 59999998
No 145
>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A*
Probab=23.95 E-value=20 Score=31.82 Aligned_cols=10 Identities=50% Similarity=0.923 Sum_probs=8.0
Q ss_pred cccCccceec
Q 001365 69 RKDGHNWRKK 78 (1092)
Q Consensus 69 r~dg~~w~k~ 78 (1092)
-.|||+|||=
T Consensus 17 ~dDGy~WRKY 26 (78)
T 1wj2_A 17 LDDGYRWRKY 26 (78)
T ss_dssp CCSSSCBCCC
T ss_pred CCCCchhhhC
Confidence 3699999983
No 146
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B
Probab=23.16 E-value=47 Score=23.23 Aligned_cols=17 Identities=47% Similarity=0.632 Sum_probs=11.5
Q ss_pred HHHHHHHHhhhHHHHHH
Q 001365 923 AATRIQNKFRSWKGRKD 939 (1092)
Q Consensus 923 AA~~IQ~~~Rg~~~Rk~ 939 (1092)
|.-.||-.||.|+.|++
T Consensus 4 at~LIqdyfRkfkkrke 20 (26)
T 2f3y_B 4 ATFLIQEYFRKFKKRKE 20 (26)
T ss_pred hhhhHHHHHHHHHHhHH
Confidence 44567777777777665
No 147
>3dvk_B Voltage-dependent R-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.30A {Rattus norvegicus} PDB: 3dvm_B
Probab=23.07 E-value=31 Score=23.64 Aligned_cols=17 Identities=29% Similarity=0.274 Sum_probs=13.0
Q ss_pred HHHHHHHHHhhhHHHHH...
Q 001365 922 AAATRIQNKFRSWKGRK... 938 (1092)
Q Consensus 922 ~AA~~IQ~~~Rg~~~Rk... 938 (1092)
-|+..||..||.|+.|+
T Consensus 7 YA~llI~d~~r~~k~r~... 23 (23)
T 3dvk_B 7 YAAMMIMDYYKQSKVKKxxx 26 (26)
T ss_dssp HHHHHHHHHHHHHHHTC...
T ss_pred HHHHHHHHHHHHHhccC...
Confidence 47888898888877653
Done!