Query 001366
Match_columns 1092
No_of_seqs 872 out of 5507
Neff 7.8
Searched_HMMs 46136
Date Thu Mar 28 22:58:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001366.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001366hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00181 protein SPA1-RELATED; 100.0 1.2E-78 2.7E-83 771.7 71.0 715 306-1092 57-793 (793)
2 KOG0271 Notchless-like WD40 re 100.0 2.3E-42 5E-47 368.4 27.9 299 761-1091 96-438 (480)
3 KOG0271 Notchless-like WD40 re 100.0 4.6E-42 1E-46 366.1 27.4 330 724-1090 109-479 (480)
4 KOG0272 U4/U6 small nuclear ri 100.0 3E-41 6.5E-46 365.0 24.1 282 777-1090 173-458 (459)
5 KOG0272 U4/U6 small nuclear ri 100.0 2.2E-38 4.7E-43 342.9 22.3 267 744-1034 187-458 (459)
6 KOG0615 Serine/threonine prote 100.0 3.4E-39 7.3E-44 351.5 8.0 262 207-593 167-448 (475)
7 KOG0581 Mitogen-activated prot 100.0 5.3E-38 1.1E-42 341.1 14.4 251 213-589 80-342 (364)
8 KOG0286 G-protein beta subunit 100.0 2.4E-35 5.3E-40 306.2 32.1 289 724-1034 49-343 (343)
9 KOG0593 Predicted protein kina 100.0 5.8E-38 1.3E-42 329.1 12.3 248 217-588 9-290 (396)
10 KOG0659 Cdk activating kinase 100.0 1.4E-37 2.9E-42 321.9 14.4 251 222-596 14-295 (318)
11 KOG0279 G protein beta subunit 100.0 9.1E-35 2E-39 300.6 33.2 299 772-1091 8-312 (315)
12 KOG0265 U5 snRNP-specific prot 100.0 6.1E-35 1.3E-39 304.6 28.8 290 774-1090 42-336 (338)
13 KOG0663 Protein kinase PITSLRE 100.0 8.7E-37 1.9E-41 324.3 13.9 269 209-599 73-378 (419)
14 KOG0661 MAPK related serine/th 100.0 8.5E-37 1.8E-41 338.0 13.5 253 213-590 11-299 (538)
15 KOG0591 NIMA (never in mitosis 100.0 3.2E-36 6.9E-41 313.1 16.6 244 210-576 17-275 (375)
16 KOG0286 G-protein beta subunit 100.0 1.2E-33 2.6E-38 293.7 34.8 284 774-1090 50-343 (343)
17 KOG0284 Polyadenylation factor 100.0 1.5E-35 3.2E-40 319.4 18.7 279 779-1090 96-378 (464)
18 KOG0600 Cdc2-related protein k 100.0 7.1E-36 1.5E-40 333.0 16.0 255 222-599 129-417 (560)
19 KOG0660 Mitogen-activated prot 100.0 6.3E-36 1.4E-40 323.6 12.7 258 220-595 32-323 (359)
20 KOG0273 Beta-transducin family 100.0 1.3E-32 2.9E-37 301.3 32.1 315 741-1091 185-522 (524)
21 KOG0279 G protein beta subunit 100.0 1.8E-32 4E-37 283.6 29.5 301 723-1036 8-313 (315)
22 KOG0583 Serine/threonine prote 100.0 1.7E-34 3.8E-39 332.0 14.7 253 210-587 15-280 (370)
23 KOG0295 WD40 repeat-containing 100.0 6.2E-33 1.4E-37 295.8 25.1 284 774-1090 103-404 (406)
24 KOG0588 Serine/threonine prote 100.0 2E-34 4.2E-39 329.6 14.5 262 205-593 5-274 (786)
25 KOG0263 Transcription initiati 100.0 6.8E-33 1.5E-37 321.5 27.4 292 777-1080 376-703 (707)
26 KOG0575 Polo-like serine/threo 100.0 2.7E-34 5.8E-39 328.5 15.4 239 222-587 30-274 (592)
27 KOG0595 Serine/threonine-prote 100.0 1.7E-34 3.8E-39 315.7 12.4 254 211-589 9-275 (429)
28 KOG0315 G-protein beta subunit 100.0 3.4E-32 7.4E-37 277.0 27.9 275 791-1091 10-287 (311)
29 KOG0592 3-phosphoinositide-dep 100.0 3E-34 6.6E-39 322.4 13.8 262 213-589 74-345 (604)
30 KOG0273 Beta-transducin family 100.0 3.3E-32 7.2E-37 298.2 27.7 287 777-1091 176-481 (524)
31 KOG0295 WD40 repeat-containing 100.0 5.1E-32 1.1E-36 288.9 27.2 321 688-1034 57-404 (406)
32 KOG0645 WD40 repeat protein [G 100.0 3.6E-31 7.7E-36 273.0 32.4 291 774-1091 9-310 (312)
33 KOG0598 Ribosomal protein S6 k 100.0 5.3E-34 1.1E-38 310.0 11.8 254 209-588 22-287 (357)
34 KOG0198 MEKK and related serin 100.0 1.2E-33 2.5E-38 313.1 14.7 251 221-590 28-284 (313)
35 KOG0594 Protein kinase PCTAIRE 100.0 1.4E-33 3.1E-38 306.8 13.7 264 211-592 10-312 (323)
36 KOG0315 G-protein beta subunit 100.0 5.7E-31 1.2E-35 268.1 31.3 276 747-1044 13-296 (311)
37 KOG0318 WD40 repeat stress pro 100.0 1.2E-30 2.7E-35 289.0 36.3 332 726-1091 143-601 (603)
38 cd00200 WD40 WD40 domain, foun 100.0 2E-30 4.4E-35 283.9 37.5 284 774-1090 4-289 (289)
39 KOG0291 WD40-repeat-containing 100.0 1.7E-30 3.6E-35 297.7 37.5 319 748-1091 281-611 (893)
40 KOG1033 eIF-2alpha kinase PEK/ 100.0 9.4E-34 2E-38 320.4 10.9 463 4-584 1-514 (516)
41 KOG0578 p21-activated serine/t 100.0 1.6E-33 3.5E-38 319.8 12.7 254 208-587 271-528 (550)
42 KOG0285 Pleiotropic regulator 100.0 2E-31 4.3E-36 282.8 26.1 290 774-1090 146-437 (460)
43 KOG0597 Serine-threonine prote 100.0 3.7E-33 8E-38 312.6 12.4 242 219-588 11-257 (808)
44 KOG0282 mRNA splicing factor [ 100.0 4.5E-32 9.8E-37 298.6 19.4 290 773-1090 208-503 (503)
45 KOG0266 WD40 repeat-containing 100.0 1.9E-30 4E-35 309.1 33.8 285 777-1091 157-453 (456)
46 KOG0605 NDR and related serine 100.0 6.3E-33 1.4E-37 312.5 10.9 302 210-589 139-452 (550)
47 KOG0192 Tyrosine kinase specif 100.0 3.4E-32 7.3E-37 310.4 16.9 241 218-582 49-299 (362)
48 KOG0276 Vesicle coat complex C 100.0 1E-30 2.2E-35 293.7 27.9 282 775-1088 9-295 (794)
49 KOG0658 Glycogen synthase kina 100.0 8.8E-33 1.9E-37 299.7 10.8 247 220-592 34-316 (364)
50 KOG0033 Ca2+/calmodulin-depend 100.0 4.5E-32 9.8E-37 276.8 15.2 209 259-588 57-273 (355)
51 KOG0263 Transcription initiati 100.0 5.3E-31 1.1E-35 305.9 25.6 238 828-1091 378-648 (707)
52 KOG0319 WD40-repeat-containing 100.0 3E-30 6.5E-35 296.0 30.5 306 747-1090 296-617 (775)
53 KOG0284 Polyadenylation factor 100.0 9.1E-32 2E-36 290.3 16.5 272 742-1038 104-382 (464)
54 KOG0582 Ste20-like serine/thre 100.0 9.1E-32 2E-36 296.1 16.0 247 224-589 40-300 (516)
55 KOG0610 Putative serine/threon 100.0 1.4E-31 3.1E-36 292.7 16.6 312 209-590 74-400 (459)
56 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7.1E-32 1.5E-36 303.2 14.1 248 214-585 7-288 (288)
57 KOG0293 WD40 repeat-containing 100.0 1.8E-30 3.9E-35 279.9 24.1 286 774-1091 219-512 (519)
58 KOG0611 Predicted serine/threo 100.0 8.5E-32 1.8E-36 290.6 13.8 247 213-587 54-308 (668)
59 KOG0277 Peroxisomal targeting 100.0 1.7E-30 3.8E-35 265.4 22.5 282 783-1090 12-307 (311)
60 KOG4721 Serine/threonine prote 100.0 1.9E-31 4.1E-36 298.2 16.5 227 220-583 134-365 (904)
61 KOG0616 cAMP-dependent protein 100.0 5.4E-32 1.2E-36 284.2 11.3 250 209-588 41-303 (355)
62 KOG0201 Serine/threonine prote 100.0 1.4E-32 3E-37 302.8 6.9 258 204-587 8-268 (467)
63 KOG0288 WD40 repeat protein Ti 100.0 9.6E-31 2.1E-35 282.9 19.6 285 774-1090 170-459 (459)
64 KOG0313 Microtubule binding pr 100.0 1.3E-29 2.7E-34 271.9 27.9 283 728-1035 103-417 (423)
65 cd05571 STKc_PKB Catalytic dom 100.0 1.5E-31 3.2E-36 305.8 13.1 242 220-588 5-257 (323)
66 KOG0291 WD40-repeat-containing 100.0 1.8E-28 3.9E-33 281.1 37.6 330 726-1091 185-549 (893)
67 KOG0316 Conserved WD40 repeat- 100.0 2.1E-29 4.6E-34 254.6 26.1 278 774-1089 12-296 (307)
68 KOG0032 Ca2+/calmodulin-depend 100.0 1.3E-30 2.8E-35 299.8 19.3 252 213-590 36-301 (382)
69 KOG1035 eIF-2alpha kinase GCN2 100.0 7.9E-31 1.7E-35 317.1 17.0 197 305-586 673-875 (1351)
70 KOG0589 Serine/threonine prote 100.0 4.1E-31 8.9E-36 299.5 13.0 212 256-587 47-263 (426)
71 KOG0281 Beta-TrCP (transducin 100.0 2E-30 4.3E-35 273.7 17.2 277 778-1091 196-476 (499)
72 PTZ00283 serine/threonine prot 100.0 2.9E-30 6.3E-35 311.1 20.9 262 213-588 33-303 (496)
73 PTZ00263 protein kinase A cata 100.0 3.2E-31 6.8E-36 303.9 11.9 249 210-587 16-276 (329)
74 cd05585 STKc_YPK1_like Catalyt 100.0 5.2E-31 1.1E-35 299.8 13.4 243 220-588 3-253 (312)
75 KOG0604 MAP kinase-activated p 100.0 1E-30 2.2E-35 274.3 13.5 248 216-590 70-330 (400)
76 KOG0319 WD40-repeat-containing 100.0 3.3E-29 7.1E-34 287.5 26.9 340 724-1091 141-576 (775)
77 cd07869 STKc_PFTAIRE1 Catalyti 100.0 8.5E-31 1.8E-35 296.6 13.8 244 221-588 16-294 (303)
78 KOG0579 Ste20-like serine/thre 100.0 6.9E-31 1.5E-35 295.7 12.6 249 214-588 34-295 (1187)
79 cd05595 STKc_PKB_beta Catalyti 100.0 1.1E-30 2.3E-35 298.8 13.5 242 220-588 5-257 (323)
80 cd05593 STKc_PKB_gamma Catalyt 100.0 1.3E-30 2.9E-35 298.7 14.0 242 220-588 5-257 (328)
81 cd05612 STKc_PRKX_like Catalyt 100.0 9.7E-31 2.1E-35 294.5 12.1 239 221-588 12-260 (291)
82 cd05590 STKc_nPKC_eta Catalyti 100.0 1.4E-30 2.9E-35 297.5 13.0 243 220-588 5-259 (320)
83 PLN00034 mitogen-activated pro 100.0 2.2E-30 4.8E-35 299.9 14.9 252 210-589 72-335 (353)
84 KOG0277 Peroxisomal targeting 100.0 1.7E-29 3.6E-34 258.2 19.3 244 778-1034 59-307 (311)
85 PHA03212 serine/threonine kina 100.0 2.1E-30 4.5E-35 303.7 14.7 248 214-592 94-386 (391)
86 KOG0599 Phosphorylase kinase g 100.0 1.4E-30 3E-35 269.4 11.4 206 262-588 72-289 (411)
87 PTZ00267 NIMA-related protein 100.0 4E-30 8.7E-35 309.3 17.0 253 214-588 69-329 (478)
88 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4.3E-30 9.3E-35 295.0 16.1 253 221-590 11-298 (338)
89 cd05584 STKc_p70S6K Catalytic 100.0 3E-30 6.5E-35 295.1 14.6 246 220-588 6-262 (323)
90 cd05591 STKc_nPKC_epsilon Cata 100.0 2.3E-30 5E-35 295.7 13.5 243 219-587 4-259 (321)
91 KOG0318 WD40 repeat stress pro 100.0 1.4E-27 3E-32 264.9 34.7 296 773-1091 141-559 (603)
92 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.4E-30 5.1E-35 298.9 13.3 273 220-588 11-291 (350)
93 cd05592 STKc_nPKC_theta_delta 100.0 3E-30 6.5E-35 294.2 13.9 244 219-588 4-254 (316)
94 cd05594 STKc_PKB_alpha Catalyt 100.0 1.6E-30 3.4E-35 297.6 11.5 242 220-588 5-258 (325)
95 cd05631 STKc_GRK4 Catalytic do 100.0 2.6E-30 5.7E-35 290.0 13.0 245 220-589 10-268 (285)
96 KOG0585 Ca2+/calmodulin-depend 100.0 2.2E-30 4.9E-35 286.6 12.1 256 213-588 98-378 (576)
97 cd05620 STKc_nPKC_delta Cataly 100.0 2.8E-30 6.1E-35 294.4 13.2 243 220-588 5-254 (316)
98 KOG0281 Beta-TrCP (transducin 100.0 6.9E-30 1.5E-34 269.6 14.8 271 744-1041 207-482 (499)
99 KOG0666 Cyclin C-dependent kin 100.0 2.5E-30 5.4E-35 272.2 11.3 253 222-591 36-346 (438)
100 cd05626 STKc_LATS2 Catalytic d 100.0 2.2E-30 4.8E-35 303.1 12.1 292 220-588 11-311 (381)
101 KOG1407 WD40 repeat protein [F 100.0 5.7E-28 1.2E-32 248.0 28.1 286 773-1090 14-309 (313)
102 KOG0694 Serine/threonine prote 100.0 1.7E-30 3.7E-35 300.3 10.7 238 222-588 380-630 (694)
103 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4E-30 8.7E-35 291.9 13.6 252 214-589 8-293 (309)
104 cd07862 STKc_CDK6 Catalytic do 100.0 8.2E-30 1.8E-34 286.2 15.9 253 214-585 3-290 (290)
105 cd05575 STKc_SGK Catalytic dom 100.0 3.9E-30 8.4E-35 294.1 13.2 242 220-587 5-256 (323)
106 PTZ00426 cAMP-dependent protei 100.0 3.4E-30 7.4E-35 296.6 12.6 250 211-588 29-290 (340)
107 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.4E-30 9.5E-35 294.9 13.5 242 220-588 11-263 (333)
108 cd05628 STKc_NDR1 Catalytic do 100.0 6.8E-30 1.5E-34 297.0 15.0 278 220-588 11-299 (363)
109 KOG0292 Vesicle coat complex C 100.0 2.3E-28 5E-33 283.2 27.3 285 775-1090 5-319 (1202)
110 cd06649 PKc_MEK2 Catalytic dom 100.0 9.2E-30 2E-34 292.1 15.9 243 220-588 15-307 (331)
111 cd05619 STKc_nPKC_theta Cataly 100.0 4.3E-30 9.4E-35 292.8 13.0 242 220-588 5-254 (316)
112 KOG0296 Angio-associated migra 100.0 1.1E-27 2.5E-32 256.0 29.9 322 726-1091 60-397 (399)
113 cd05608 STKc_GRK1 Catalytic do 100.0 8.6E-30 1.9E-34 285.1 14.2 245 220-588 3-263 (280)
114 cd07848 STKc_CDKL5 Catalytic d 100.0 8.3E-30 1.8E-34 285.7 13.9 242 221-585 12-287 (287)
115 cd05625 STKc_LATS1 Catalytic d 100.0 5.5E-30 1.2E-34 299.9 12.9 290 220-588 11-311 (382)
116 cd05589 STKc_PKN Catalytic dom 100.0 8.9E-30 1.9E-34 291.3 14.3 242 220-588 9-263 (324)
117 PTZ00036 glycogen synthase kin 100.0 1.9E-29 4.1E-34 300.2 17.6 250 220-591 76-360 (440)
118 cd05587 STKc_cPKC Catalytic do 100.0 6.9E-30 1.5E-34 292.2 13.3 242 220-587 10-262 (324)
119 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.7E-29 3.6E-34 290.6 16.4 247 219-581 16-329 (338)
120 cd05588 STKc_aPKC Catalytic do 100.0 6.7E-30 1.4E-34 293.0 13.0 243 220-587 5-267 (329)
121 cd05599 STKc_NDR_like Catalyti 100.0 1.4E-29 2.9E-34 294.5 15.7 281 220-588 11-302 (364)
122 cd05618 STKc_aPKC_iota Catalyt 100.0 8.1E-30 1.8E-34 292.3 13.1 244 219-587 4-267 (329)
123 KOG0596 Dual specificity; seri 100.0 9.7E-30 2.1E-34 285.8 13.3 252 212-588 361-633 (677)
124 KOG0645 WD40 repeat protein [G 100.0 1.9E-27 4.1E-32 245.5 28.8 288 725-1035 9-310 (312)
125 cd05601 STKc_CRIK Catalytic do 100.0 6.7E-30 1.5E-34 292.9 12.0 246 220-588 11-269 (330)
126 cd05604 STKc_SGK3 Catalytic do 100.0 6.1E-30 1.3E-34 292.8 11.6 243 220-588 5-257 (325)
127 cd05614 STKc_MSK2_N N-terminal 100.0 8.8E-30 1.9E-34 292.2 12.8 248 220-588 10-273 (332)
128 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.4E-29 5.1E-34 290.0 16.2 255 214-591 17-307 (343)
129 KOG0292 Vesicle coat complex C 100.0 1.3E-27 2.9E-32 276.9 30.4 272 747-1042 24-327 (1202)
130 cd05629 STKc_NDR_like_fungal C 100.0 8.1E-30 1.8E-34 297.9 12.4 291 220-588 11-311 (377)
131 cd05570 STKc_PKC Catalytic dom 100.0 1.1E-29 2.3E-34 289.8 13.1 242 220-587 5-257 (318)
132 cd05598 STKc_LATS Catalytic do 100.0 5.4E-30 1.2E-34 299.2 10.4 286 221-588 12-307 (376)
133 cd05602 STKc_SGK1 Catalytic do 100.0 1.2E-29 2.5E-34 290.4 12.7 243 219-587 4-256 (325)
134 cd05603 STKc_SGK2 Catalytic do 100.0 1.3E-29 2.9E-34 289.4 13.1 242 220-587 5-256 (321)
135 PHA03209 serine/threonine kina 100.0 1.6E-29 3.5E-34 293.2 13.8 234 220-587 76-356 (357)
136 cd05596 STKc_ROCK Catalytic do 100.0 1.8E-29 3.8E-34 294.2 14.2 253 211-587 42-309 (370)
137 KOG0285 Pleiotropic regulator 100.0 3.2E-28 7E-33 258.5 22.2 242 822-1091 145-388 (460)
138 cd05586 STKc_Sck1_like Catalyt 100.0 5.8E-30 1.3E-34 293.5 9.9 244 220-588 3-259 (330)
139 cd07863 STKc_CDK4 Catalytic do 100.0 2.1E-29 4.5E-34 282.5 14.1 245 221-585 11-288 (288)
140 KOG0643 Translation initiation 100.0 1.3E-27 2.7E-32 246.0 25.9 294 775-1090 6-315 (327)
141 KOG0275 Conserved WD40 repeat- 100.0 8.7E-29 1.9E-33 258.9 17.6 287 777-1090 211-507 (508)
142 PHA03211 serine/threonine kina 100.0 1.4E-29 3.1E-34 300.8 13.2 245 214-587 171-460 (461)
143 cd06650 PKc_MEK1 Catalytic dom 100.0 3.3E-29 7.2E-34 287.7 15.4 248 214-588 7-305 (333)
144 cd05621 STKc_ROCK2 Catalytic d 100.0 2.7E-29 5.9E-34 292.5 14.0 245 220-588 53-310 (370)
145 cd07868 STKc_CDK8 Catalytic do 100.0 3.2E-29 7E-34 285.3 13.9 249 217-585 8-317 (317)
146 KOG0276 Vesicle coat complex C 100.0 8.3E-28 1.8E-32 270.4 24.6 240 826-1090 11-255 (794)
147 cd05607 STKc_GRK7 Catalytic do 100.0 4.7E-29 1E-33 278.7 14.7 245 220-588 3-260 (277)
148 cd07876 STKc_JNK2 Catalytic do 100.0 6.3E-29 1.4E-33 288.4 16.2 255 214-590 23-323 (359)
149 cd05582 STKc_RSK_N N-terminal 100.0 1.4E-29 3E-34 288.9 10.4 246 220-588 6-260 (318)
150 cd05616 STKc_cPKC_beta Catalyt 100.0 3.2E-29 6.9E-34 286.5 13.3 243 220-588 10-263 (323)
151 KOG0313 Microtubule binding pr 100.0 2.4E-27 5.3E-32 254.4 26.6 279 777-1090 103-416 (423)
152 cd05627 STKc_NDR2 Catalytic do 100.0 2.9E-29 6.3E-34 291.3 12.8 279 220-588 11-299 (360)
153 KOG0316 Conserved WD40 repeat- 100.0 1.5E-27 3.3E-32 241.3 23.4 244 823-1092 12-257 (307)
154 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4.3E-29 9.3E-34 282.3 13.4 256 211-590 5-294 (301)
155 KOG0772 Uncharacterized conser 100.0 2E-27 4.3E-32 262.6 25.4 291 774-1089 162-484 (641)
156 KOG4717 Serine/threonine prote 100.0 4.8E-29 1E-33 276.0 12.8 254 213-593 19-281 (864)
157 KOG0667 Dual-specificity tyros 100.0 3.8E-29 8.2E-34 289.7 12.4 250 213-591 187-511 (586)
158 cd07875 STKc_JNK1 Catalytic do 100.0 8.2E-29 1.8E-33 288.0 15.3 257 213-591 25-327 (364)
159 cd00200 WD40 WD40 domain, foun 100.0 3.8E-26 8.1E-31 250.0 35.5 282 725-1034 4-289 (289)
160 KOG0266 WD40 repeat-containing 100.0 5.1E-27 1.1E-31 279.6 30.9 266 749-1035 176-453 (456)
161 cd07874 STKc_JNK3 Catalytic do 100.0 8.7E-29 1.9E-33 286.8 15.2 256 213-590 18-319 (355)
162 cd05617 STKc_aPKC_zeta Catalyt 100.0 3.9E-29 8.5E-34 286.4 11.8 245 219-588 4-266 (327)
163 KOG0282 mRNA splicing factor [ 100.0 1.9E-28 4.1E-33 270.1 16.0 250 822-1091 208-461 (503)
164 cd05108 PTKc_EGFR Catalytic do 100.0 1.5E-28 3.2E-33 280.0 15.8 244 220-582 17-264 (316)
165 cd05622 STKc_ROCK1 Catalytic d 100.0 9.7E-29 2.1E-33 288.0 14.5 252 213-588 44-310 (371)
166 cd05048 PTKc_Ror Catalytic Dom 100.0 1.9E-28 4.1E-33 274.0 16.1 253 212-582 5-279 (283)
167 cd06637 STKc_TNIK Catalytic do 100.0 2.5E-28 5.3E-33 271.3 16.5 246 221-585 17-272 (272)
168 cd07853 STKc_NLK Catalytic dom 100.0 1.4E-28 3E-33 287.0 14.9 250 220-588 10-294 (372)
169 cd05597 STKc_DMPK_like Catalyt 100.0 1.5E-28 3.3E-33 282.0 14.9 247 220-588 11-272 (331)
170 cd06609 STKc_MST3_like Catalyt 100.0 2.1E-28 4.6E-33 272.4 15.3 248 214-588 3-257 (274)
171 cd05615 STKc_cPKC_alpha Cataly 100.0 1.3E-28 2.8E-33 281.6 13.9 244 219-588 9-263 (323)
172 PHA03207 serine/threonine kina 100.0 1.5E-28 3.2E-33 288.7 14.5 249 214-589 94-382 (392)
173 KOG4645 MAPKKK (MAP kinase kin 100.0 2.2E-29 4.7E-34 305.8 7.6 251 222-592 1247-1504(1509)
174 cd05106 PTKc_CSF-1R Catalytic 100.0 2.2E-28 4.7E-33 285.4 15.7 253 213-582 39-368 (374)
175 PTZ00284 protein kinase; Provi 100.0 6.5E-29 1.4E-33 298.4 11.6 176 306-589 210-445 (467)
176 cd05623 STKc_MRCK_alpha Cataly 100.0 1.3E-28 2.8E-33 282.6 13.5 247 220-588 11-272 (332)
177 cd06645 STKc_MAP4K3 Catalytic 100.0 3.2E-28 6.9E-33 269.8 16.1 247 213-584 10-267 (267)
178 cd05605 STKc_GRK4_like Catalyt 100.0 1.7E-28 3.7E-33 275.3 14.0 244 220-588 10-267 (285)
179 cd08227 PK_STRAD_alpha Pseudok 100.0 2.6E-28 5.5E-33 279.6 15.4 251 222-588 12-313 (327)
180 cd06643 STKc_SLK Catalytic dom 100.0 5.1E-28 1.1E-32 270.7 17.5 250 215-588 8-268 (282)
181 cd05054 PTKc_VEGFR Catalytic d 100.0 5.8E-28 1.3E-32 277.9 17.9 254 213-582 8-329 (337)
182 cd05104 PTKc_Kit Catalytic dom 100.0 4.2E-28 9.2E-33 283.1 16.9 253 213-582 36-370 (375)
183 KOG0306 WD40-repeat-containing 100.0 1.1E-26 2.5E-31 266.3 28.0 283 773-1091 367-663 (888)
184 cd06625 STKc_MEKK3_like Cataly 100.0 3.6E-28 7.9E-33 268.3 15.4 251 214-585 4-263 (263)
185 KOG0283 WD40 repeat-containing 100.0 5.7E-27 1.2E-31 274.8 25.9 252 771-1035 258-575 (712)
186 PHA02988 hypothetical protein; 100.0 3.3E-28 7.2E-33 272.9 15.1 239 219-582 29-275 (283)
187 KOG0577 Serine/threonine prote 100.0 2.4E-28 5.3E-33 274.4 13.6 241 219-590 35-286 (948)
188 PF00069 Pkinase: Protein kina 100.0 3.7E-29 8E-34 275.4 6.7 243 219-585 8-260 (260)
189 cd08529 STKc_FA2-like Catalyti 100.0 5.2E-28 1.1E-32 265.8 15.7 241 221-585 11-256 (256)
190 KOG0293 WD40 repeat-containing 100.0 2.6E-26 5.7E-31 247.9 28.1 292 720-1036 214-513 (519)
191 KOG1989 ARK protein kinase fam 100.0 1.4E-28 3.1E-33 293.5 11.7 272 191-584 27-309 (738)
192 cd05049 PTKc_Trk Catalytic dom 100.0 1E-27 2.3E-32 267.4 17.6 251 213-581 6-276 (280)
193 cd07839 STKc_CDK5 Catalytic do 100.0 3.1E-28 6.6E-33 272.4 13.2 242 220-585 10-284 (284)
194 KOG0310 Conserved WD40 repeat- 100.0 1.1E-26 2.5E-31 256.7 25.2 279 778-1089 25-306 (487)
195 cd05624 STKc_MRCK_beta Catalyt 100.0 2.7E-28 5.9E-33 279.9 13.0 246 220-587 11-271 (331)
196 KOG0265 U5 snRNP-specific prot 100.0 1.4E-26 3E-31 242.3 24.4 249 822-1091 41-295 (338)
197 KOG0274 Cdc4 and related F-box 100.0 2.5E-26 5.4E-31 273.5 30.0 273 777-1091 206-481 (537)
198 cd06615 PKc_MEK Catalytic doma 100.0 3.5E-28 7.5E-33 276.1 13.4 243 220-588 11-293 (308)
199 KOG4279 Serine/threonine prote 100.0 6.8E-29 1.5E-33 282.5 7.4 244 221-588 586-838 (1226)
200 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 9.7E-28 2.1E-32 268.8 16.6 252 214-590 3-270 (286)
201 cd05090 PTKc_Ror1 Catalytic do 100.0 7.3E-28 1.6E-32 269.5 15.6 245 220-582 15-279 (283)
202 cd06611 STKc_SLK_like Catalyti 100.0 8.2E-28 1.8E-32 268.6 15.9 253 211-588 4-268 (280)
203 cd06631 STKc_YSK4 Catalytic do 100.0 6.6E-28 1.4E-32 266.9 14.9 246 221-585 11-265 (265)
204 KOG0301 Phospholipase A2-activ 100.0 1.5E-26 3.2E-31 264.1 26.0 276 774-1091 9-287 (745)
205 KOG1446 Histone H3 (Lys4) meth 100.0 3.3E-25 7.1E-30 234.6 34.2 281 775-1089 10-300 (311)
206 cd05091 PTKc_Ror2 Catalytic do 99.9 1.1E-27 2.4E-32 267.9 16.7 255 210-582 3-279 (283)
207 cd05574 STKc_phototropin_like 99.9 1.1E-27 2.4E-32 272.6 16.8 277 220-590 11-297 (316)
208 cd08223 STKc_Nek4 Catalytic do 99.9 6.9E-28 1.5E-32 265.2 14.6 242 221-585 11-257 (257)
209 cd07832 STKc_CCRK Catalytic do 99.9 8.9E-28 1.9E-32 268.7 15.7 244 220-586 10-286 (286)
210 cd05632 STKc_GRK5 Catalytic do 99.9 7.5E-28 1.6E-32 270.1 15.1 245 219-588 9-267 (285)
211 PLN00181 protein SPA1-RELATED; 99.9 1.5E-25 3.2E-30 285.8 38.0 292 729-1035 482-792 (793)
212 KOG0647 mRNA export protein (c 99.9 4.3E-26 9.4E-31 238.6 27.0 273 777-1080 25-311 (347)
213 cd05064 PTKc_EphR_A10 Catalyti 99.9 1.1E-27 2.3E-32 266.0 15.9 241 221-581 16-260 (266)
214 cd05084 PTKc_Fes Catalytic dom 99.9 1.2E-27 2.7E-32 262.7 16.3 240 220-581 5-248 (252)
215 cd05096 PTKc_DDR1 Catalytic do 99.9 9E-28 1.9E-32 271.9 15.6 245 220-581 15-300 (304)
216 cd06644 STKc_STK10_LOK Catalyt 99.9 1.5E-27 3.3E-32 268.3 17.3 250 214-588 14-275 (292)
217 cd05630 STKc_GRK6 Catalytic do 99.9 4.2E-28 9.1E-33 272.2 12.7 244 220-588 10-267 (285)
218 cd06624 STKc_ASK Catalytic dom 99.9 1.1E-27 2.5E-32 265.6 15.7 245 217-585 15-268 (268)
219 KOG0296 Angio-associated migra 99.9 6.1E-26 1.3E-30 242.8 28.1 291 774-1091 59-355 (399)
220 cd07861 STKc_CDK1_euk Catalyti 99.9 5.8E-28 1.3E-32 270.2 13.4 242 220-585 10-285 (285)
221 cd07867 STKc_CDC2L6 Catalytic 99.9 5.7E-28 1.2E-32 274.8 13.6 248 218-585 9-317 (317)
222 PTZ00266 NIMA-related protein 99.9 3.7E-28 7.9E-33 301.7 12.9 255 213-590 14-303 (1021)
223 cd06654 STKc_PAK1 Catalytic do 99.9 1E-27 2.2E-32 270.6 15.5 245 220-590 30-278 (296)
224 cd05109 PTKc_HER2 Catalytic do 99.9 1.3E-27 2.7E-32 267.0 16.0 243 219-581 16-263 (279)
225 KOG0662 Cyclin-dependent kinas 99.9 5.1E-28 1.1E-32 236.5 11.1 244 221-588 13-289 (292)
226 KOG0197 Tyrosine kinases [Sign 99.9 8.3E-28 1.8E-32 273.3 14.3 243 213-580 207-455 (468)
227 cd06658 STKc_PAK5 Catalytic do 99.9 7.1E-28 1.5E-32 271.4 13.8 251 215-592 27-282 (292)
228 cd06605 PKc_MAPKK Catalytic do 99.9 8.6E-28 1.9E-32 265.7 14.1 244 219-587 10-262 (265)
229 cd07831 STKc_MOK Catalytic dom 99.9 1.2E-27 2.7E-32 267.0 15.2 241 221-585 10-282 (282)
230 cd05633 STKc_GRK3 Catalytic do 99.9 7.8E-28 1.7E-32 269.2 13.3 243 220-588 4-261 (279)
231 cd06619 PKc_MKK5 Catalytic dom 99.9 1.5E-27 3.2E-32 266.7 15.4 240 219-588 10-259 (279)
232 cd06655 STKc_PAK2 Catalytic do 99.9 1.6E-27 3.5E-32 269.1 15.8 244 221-590 30-277 (296)
233 cd05111 PTK_HER3 Pseudokinase 99.9 2.6E-27 5.7E-32 264.8 17.1 244 220-582 17-264 (279)
234 KOG0580 Serine/threonine prote 99.9 6.7E-28 1.5E-32 247.0 10.9 244 214-587 24-278 (281)
235 KOG0584 Serine/threonine prote 99.9 5.4E-28 1.2E-32 277.3 11.4 253 210-588 40-302 (632)
236 KOG0300 WD40 repeat-containing 99.9 5.7E-26 1.2E-30 237.5 25.5 310 744-1092 124-476 (481)
237 cd05115 PTKc_Zap-70 Catalytic 99.9 1.8E-27 3.9E-32 262.8 15.3 244 219-582 4-251 (257)
238 cd06656 STKc_PAK3 Catalytic do 99.9 9.2E-28 2E-32 271.1 13.1 254 213-592 20-279 (297)
239 cd06642 STKc_STK25-YSK1 Cataly 99.9 1.6E-27 3.5E-32 265.9 14.9 244 220-588 14-259 (277)
240 KOG0640 mRNA cleavage stimulat 99.9 1.9E-26 4E-31 241.0 21.6 292 774-1090 107-424 (430)
241 cd06628 STKc_MAPKKK_Byr2_like 99.9 2.4E-27 5.3E-32 262.5 16.2 247 220-585 10-267 (267)
242 cd06646 STKc_MAP4K5 Catalytic 99.9 1.4E-27 3.1E-32 264.5 14.3 250 210-584 7-267 (267)
243 cd06636 STKc_MAP4K4_6 Catalyti 99.9 1.6E-27 3.4E-32 266.6 14.6 248 219-585 25-282 (282)
244 KOG0603 Ribosomal protein S6 k 99.9 8.4E-28 1.8E-32 277.0 12.2 242 209-585 319-566 (612)
245 cd07845 STKc_CDK10 Catalytic d 99.9 1.5E-27 3.3E-32 270.7 14.0 259 213-593 8-301 (309)
246 cd06640 STKc_MST4 Catalytic do 99.9 1.9E-27 4.1E-32 265.4 14.6 249 214-588 6-259 (277)
247 cd05033 PTKc_EphR Catalytic do 99.9 4.5E-27 9.7E-32 260.5 17.3 244 220-582 14-261 (266)
248 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 2.5E-27 5.5E-32 261.6 15.2 237 219-582 4-256 (258)
249 KOG0278 Serine/threonine kinas 99.9 9.6E-27 2.1E-31 237.1 17.7 281 776-1091 11-296 (334)
250 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 3.2E-27 7E-32 261.7 15.7 236 220-582 5-260 (262)
251 KOG0665 Jun-N-terminal kinase 99.9 1.7E-27 3.8E-32 253.0 12.8 243 222-586 28-314 (369)
252 cd06612 STKc_MST1_2 Catalytic 99.9 2.7E-27 5.9E-32 260.0 14.9 240 220-585 13-256 (256)
253 cd05062 PTKc_IGF-1R Catalytic 99.9 3.3E-27 7.2E-32 263.4 15.7 245 220-582 16-274 (277)
254 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 4.2E-27 9.2E-32 263.6 16.5 250 219-582 13-279 (284)
255 cd00192 PTKc Catalytic domain 99.9 5.1E-27 1.1E-31 258.0 16.5 244 220-582 5-260 (262)
256 cd06651 STKc_MEKK3 Catalytic d 99.9 3.2E-27 6.8E-32 261.9 14.9 246 220-586 12-265 (266)
257 cd06648 STKc_PAK_II Catalytic 99.9 3.9E-27 8.5E-32 264.3 15.7 245 219-590 28-277 (285)
258 cd06659 STKc_PAK6 Catalytic do 99.9 3.8E-27 8.3E-32 266.1 15.7 249 215-590 26-279 (297)
259 cd07843 STKc_CDC2L1 Catalytic 99.9 3.2E-27 6.9E-32 265.7 15.0 253 211-585 4-293 (293)
260 KOG0264 Nucleosome remodeling 99.9 8E-26 1.7E-30 248.8 25.4 261 776-1036 121-404 (422)
261 KOG0586 Serine/threonine prote 99.9 1.5E-27 3.2E-32 273.6 12.0 259 206-591 50-315 (596)
262 cd06613 STKc_MAP4K3_like Catal 99.9 3.9E-27 8.5E-32 259.7 14.9 241 220-584 13-262 (262)
263 KOG0299 U3 snoRNP-associated p 99.9 1.4E-25 3.1E-30 246.2 26.7 287 775-1081 138-444 (479)
264 cd07870 STKc_PFTAIRE2 Catalyti 99.9 4.8E-27 1E-31 264.0 15.6 241 221-585 16-291 (291)
265 cd07841 STKc_CDK7 Catalytic do 99.9 4E-27 8.6E-32 265.5 14.9 250 219-592 9-292 (298)
266 cd05113 PTKc_Btk_Bmx Catalytic 99.9 6.4E-27 1.4E-31 258.1 16.1 236 221-582 15-254 (256)
267 cd05058 PTKc_Met_Ron Catalytic 99.9 7.5E-27 1.6E-31 257.9 16.7 247 220-582 5-255 (262)
268 cd07844 STKc_PCTAIRE_like Cata 99.9 2.3E-27 5E-32 266.4 12.8 242 220-585 15-291 (291)
269 KOG0268 Sof1-like rRNA process 99.9 1.2E-26 2.6E-31 247.5 17.3 280 774-1090 61-343 (433)
270 cd05094 PTKc_TrkC Catalytic do 99.9 5.1E-27 1.1E-31 264.0 15.5 251 213-582 6-278 (291)
271 cd05114 PTKc_Tec_Rlk Catalytic 99.9 5.3E-27 1.2E-31 258.4 15.3 244 213-582 5-254 (256)
272 PTZ00420 coronin; Provisional 99.9 1E-24 2.2E-29 260.6 35.9 250 797-1075 50-319 (568)
273 KOG0268 Sof1-like rRNA process 99.9 1.1E-26 2.5E-31 247.6 16.9 286 726-1039 62-348 (433)
274 cd08217 STKc_Nek2 Catalytic do 99.9 6.2E-27 1.3E-31 258.0 15.5 243 221-585 11-265 (265)
275 cd05572 STKc_cGK_PKG Catalytic 99.9 6.5E-27 1.4E-31 258.5 15.7 244 220-588 3-258 (262)
276 cd05075 PTKc_Axl Catalytic dom 99.9 9.8E-27 2.1E-31 258.4 17.1 250 219-582 8-267 (272)
277 PHA03390 pk1 serine/threonine- 99.9 3.9E-27 8.4E-32 261.8 13.8 233 219-586 25-266 (267)
278 cd06610 STKc_OSR1_SPAK Catalyt 99.9 5.5E-27 1.2E-31 259.2 14.9 247 220-585 11-267 (267)
279 cd05089 PTKc_Tie1 Catalytic do 99.9 6.4E-27 1.4E-31 264.1 15.7 247 213-582 3-271 (297)
280 cd05116 PTKc_Syk Catalytic dom 99.9 7.8E-27 1.7E-31 257.4 16.0 243 219-582 4-251 (257)
281 cd05105 PTKc_PDGFR_alpha Catal 99.9 6.2E-27 1.3E-31 274.8 16.1 246 219-581 46-392 (400)
282 cd08221 STKc_Nek9 Catalytic do 99.9 6.7E-27 1.5E-31 257.3 15.4 211 255-585 42-256 (256)
283 cd05053 PTKc_FGFR Catalytic do 99.9 6.3E-27 1.4E-31 263.2 15.5 245 220-582 22-287 (293)
284 cd07849 STKc_ERK1_2_like Catal 99.9 4.8E-27 1E-31 270.1 14.8 255 221-593 16-303 (336)
285 KOG0289 mRNA splicing factor [ 99.9 3E-25 6.4E-30 241.5 27.6 282 779-1091 219-505 (506)
286 cd05061 PTKc_InsR Catalytic do 99.9 7.9E-27 1.7E-31 262.1 16.1 249 221-587 17-285 (288)
287 cd05052 PTKc_Abl Catalytic dom 99.9 8.5E-27 1.9E-31 258.0 16.0 245 213-582 7-258 (263)
288 cd08226 PK_STRAD_beta Pseudoki 99.9 6.8E-27 1.5E-31 267.9 15.6 257 218-590 8-316 (328)
289 cd06623 PKc_MAPKK_plant_like C 99.9 7E-27 1.5E-31 257.9 15.1 245 220-588 11-262 (264)
290 cd05092 PTKc_TrkA Catalytic do 99.9 8.5E-27 1.8E-31 260.7 15.9 249 214-581 7-276 (280)
291 cd07860 STKc_CDK2_3 Catalytic 99.9 6E-27 1.3E-31 262.0 14.7 241 221-585 11-284 (284)
292 cd06917 STKc_NAK1_like Catalyt 99.9 7.2E-27 1.6E-31 260.4 15.2 244 219-589 10-262 (277)
293 cd05576 STKc_RPK118_like Catal 99.9 2.9E-27 6.3E-32 258.0 11.7 230 220-585 3-237 (237)
294 cd05036 PTKc_ALK_LTK Catalytic 99.9 7.7E-27 1.7E-31 260.6 15.3 244 221-582 17-274 (277)
295 cd06652 STKc_MEKK2 Catalytic d 99.9 7.5E-27 1.6E-31 258.6 15.1 246 221-586 13-265 (265)
296 cd06638 STKc_myosinIIIA Cataly 99.9 9.7E-27 2.1E-31 260.6 16.1 252 213-585 19-286 (286)
297 cd05579 STKc_MAST_like Catalyt 99.9 4.6E-27 1E-31 259.0 13.3 252 220-587 3-262 (265)
298 cd05101 PTKc_FGFR2 Catalytic d 99.9 1.2E-26 2.5E-31 262.8 16.9 244 220-582 25-292 (304)
299 cd06632 STKc_MEKK1_plant Catal 99.9 8.8E-27 1.9E-31 256.1 15.4 241 220-585 10-258 (258)
300 cd08216 PK_STRAD Pseudokinase 99.9 8.5E-27 1.8E-31 265.0 15.7 260 214-589 4-302 (314)
301 KOG0669 Cyclin T-dependent kin 99.9 1.7E-27 3.6E-32 244.3 8.8 259 219-589 26-322 (376)
302 cd05055 PTKc_PDGFR Catalytic d 99.9 1.1E-26 2.3E-31 263.1 16.5 246 220-582 45-297 (302)
303 cd05032 PTKc_InsR_like Catalyt 99.9 1.3E-26 2.7E-31 258.2 16.8 244 221-582 17-274 (277)
304 cd05059 PTKc_Tec_like Catalyti 99.9 1.1E-26 2.3E-31 256.1 16.0 243 214-582 6-254 (256)
305 cd05110 PTKc_HER4 Catalytic do 99.9 9.2E-27 2E-31 263.7 15.8 244 218-582 15-264 (303)
306 cd05035 PTKc_Axl_like Catalyti 99.9 1.5E-26 3.2E-31 256.8 17.2 251 219-582 8-268 (273)
307 KOG2345 Serine/threonine prote 99.9 3.1E-27 6.7E-32 243.0 10.7 224 253-582 59-296 (302)
308 cd05085 PTKc_Fer Catalytic dom 99.9 1.8E-26 3.8E-31 253.0 17.5 240 219-582 4-247 (250)
309 KOG0973 Histone transcription 99.9 3.2E-25 7E-30 265.8 29.5 292 775-1091 9-354 (942)
310 cd07847 STKc_CDKL1_4 Catalytic 99.9 4.9E-27 1.1E-31 262.7 13.2 242 220-585 11-286 (286)
311 cd07865 STKc_CDK9 Catalytic do 99.9 1E-26 2.2E-31 263.3 15.8 260 214-585 14-310 (310)
312 cd07850 STKc_JNK Catalytic dom 99.9 7.9E-27 1.7E-31 270.2 15.1 247 220-588 26-317 (353)
313 cd08219 STKc_Nek3 Catalytic do 99.9 7.7E-27 1.7E-31 256.8 14.3 238 221-582 11-252 (255)
314 cd07837 STKc_CdkB_plant Cataly 99.9 7.8E-27 1.7E-31 262.6 14.6 247 221-586 12-295 (295)
315 cd05606 STKc_beta_ARK Catalyti 99.9 7.5E-27 1.6E-31 261.1 14.1 242 220-588 4-261 (278)
316 cd06614 STKc_PAK Catalytic dom 99.9 1.4E-26 2.9E-31 259.7 16.2 245 217-587 26-275 (286)
317 cd06641 STKc_MST3 Catalytic do 99.9 1.1E-26 2.4E-31 259.3 15.3 243 221-588 15-259 (277)
318 cd05103 PTKc_VEGFR2 Catalytic 99.9 1.4E-26 3E-31 267.1 16.7 253 213-582 8-335 (343)
319 cd05088 PTKc_Tie2 Catalytic do 99.9 8.5E-27 1.8E-31 264.0 14.5 247 211-582 6-276 (303)
320 cd05093 PTKc_TrkB Catalytic do 99.9 1.7E-26 3.6E-31 259.4 16.7 243 220-581 15-274 (288)
321 cd05040 PTKc_Ack_like Catalyti 99.9 2E-26 4.4E-31 253.6 17.0 246 219-582 4-254 (257)
322 cd05609 STKc_MAST Catalytic do 99.9 1.2E-26 2.5E-31 263.0 15.4 259 221-589 12-280 (305)
323 cd05611 STKc_Rim15_like Cataly 99.9 1.1E-26 2.3E-31 256.5 14.6 240 220-588 6-257 (260)
324 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 1.2E-26 2.5E-31 260.1 15.1 251 212-588 5-272 (284)
325 cd05060 PTKc_Syk_like Catalyti 99.9 1.8E-26 3.8E-31 254.5 16.2 243 220-581 5-250 (257)
326 KOG0306 WD40-repeat-containing 99.9 1.7E-24 3.7E-29 248.6 32.8 310 749-1091 82-579 (888)
327 cd06608 STKc_myosinIII_like Ca 99.9 8.2E-27 1.8E-31 258.7 13.7 245 221-585 17-275 (275)
328 cd06629 STKc_MAPKKK_Bck1_like 99.9 1.8E-26 3.8E-31 256.5 16.4 244 220-585 11-272 (272)
329 cd08228 STKc_Nek6 Catalytic do 99.9 1E-26 2.3E-31 257.4 14.5 239 221-582 13-261 (267)
330 cd06617 PKc_MKK3_6 Catalytic d 99.9 1.1E-26 2.4E-31 259.6 14.7 245 220-589 11-268 (283)
331 PTZ00421 coronin; Provisional 99.9 2.7E-24 5.9E-29 255.8 35.9 257 780-1046 21-300 (493)
332 cd05148 PTKc_Srm_Brk Catalytic 99.9 2.1E-26 4.4E-31 254.2 16.6 243 213-581 7-256 (261)
333 PHA03210 serine/threonine kina 99.9 8.8E-27 1.9E-31 281.6 14.9 210 260-588 211-460 (501)
334 cd07846 STKc_CDKL2_3 Catalytic 99.9 6.7E-27 1.5E-31 261.7 12.8 241 221-585 12-286 (286)
335 cd06630 STKc_MEKK1 Catalytic d 99.9 1.6E-26 3.4E-31 256.0 15.6 248 219-586 9-268 (268)
336 cd05045 PTKc_RET Catalytic dom 99.9 1.7E-26 3.7E-31 259.5 16.0 244 220-581 10-281 (290)
337 cd07855 STKc_ERK5 Catalytic do 99.9 1.2E-26 2.7E-31 266.5 15.0 257 220-593 15-305 (334)
338 cd05072 PTKc_Lyn Catalytic dom 99.9 1.8E-26 4E-31 254.8 15.8 235 221-581 17-256 (261)
339 cd05098 PTKc_FGFR1 Catalytic d 99.9 1.6E-26 3.5E-31 262.1 15.7 252 213-582 19-295 (307)
340 cd07836 STKc_Pho85 Catalytic d 99.9 8.3E-27 1.8E-31 260.7 13.1 242 220-585 10-284 (284)
341 cd08220 STKc_Nek8 Catalytic do 99.9 1.7E-26 3.7E-31 253.8 15.3 241 220-585 10-256 (256)
342 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 2.2E-26 4.7E-31 257.6 16.4 245 221-581 15-276 (283)
343 cd05107 PTKc_PDGFR_beta Cataly 99.9 1.7E-26 3.7E-31 271.0 16.2 255 211-582 36-395 (401)
344 cd05580 STKc_PKA Catalytic dom 99.9 1.4E-26 3E-31 260.4 14.7 240 220-588 11-260 (290)
345 KOG0986 G protein-coupled rece 99.9 1.7E-27 3.8E-32 261.9 7.1 180 305-588 262-452 (591)
346 cd08229 STKc_Nek7 Catalytic do 99.9 2.4E-26 5.2E-31 254.6 16.4 247 212-581 2-260 (267)
347 cd05577 STKc_GRK Catalytic dom 99.9 1.3E-26 2.8E-31 258.8 14.1 244 220-588 3-260 (277)
348 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 1.6E-26 3.5E-31 254.4 14.6 234 219-581 4-256 (259)
349 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 1.9E-26 4.1E-31 257.3 15.2 197 260-582 64-272 (274)
350 cd05041 PTKc_Fes_like Catalyti 99.9 2.3E-26 5.1E-31 252.2 15.6 241 219-582 4-248 (251)
351 cd06607 STKc_TAO Catalytic dom 99.9 5.9E-26 1.3E-30 257.5 19.3 246 214-588 17-273 (307)
352 cd06647 STKc_PAK_I Catalytic d 99.9 1.2E-26 2.6E-31 261.5 13.6 253 213-591 20-278 (293)
353 cd05099 PTKc_FGFR4 Catalytic d 99.9 2.9E-26 6.4E-31 260.9 16.7 244 221-582 23-289 (314)
354 cd05068 PTKc_Frk_like Catalyti 99.9 4.1E-26 8.8E-31 252.1 17.1 236 220-581 16-256 (261)
355 cd05042 PTKc_Aatyk Catalytic d 99.9 2.5E-26 5.3E-31 255.1 15.4 244 219-582 4-266 (269)
356 KOG0274 Cdc4 and related F-box 99.9 8.1E-25 1.7E-29 260.6 29.2 272 743-1044 217-490 (537)
357 cd07880 STKc_p38gamma_MAPK12 C 99.9 2.3E-26 4.9E-31 265.3 15.4 251 220-593 25-309 (343)
358 cd05044 PTKc_c-ros Catalytic d 99.9 3.8E-26 8.2E-31 253.3 16.6 245 220-582 5-266 (269)
359 cd05050 PTKc_Musk Catalytic do 99.9 2.8E-26 6E-31 257.5 15.6 244 220-581 15-284 (288)
360 cd05097 PTKc_DDR_like Catalyti 99.9 4.1E-26 8.8E-31 257.2 17.0 252 213-581 6-291 (295)
361 cd05063 PTKc_EphR_A2 Catalytic 99.9 3.7E-26 8E-31 253.4 16.4 245 220-582 15-263 (268)
362 cd08218 STKc_Nek1 Catalytic do 99.9 2E-26 4.3E-31 253.6 14.1 241 221-585 11-256 (256)
363 KOG0310 Conserved WD40 repeat- 99.9 4.9E-25 1.1E-29 243.9 24.8 243 775-1035 64-308 (487)
364 cd05056 PTKc_FAK Catalytic dom 99.9 3.9E-26 8.5E-31 253.6 16.4 241 221-582 17-261 (270)
365 PLN03225 Serine/threonine-prot 99.9 3.6E-26 7.9E-31 278.1 17.5 185 304-590 211-458 (566)
366 cd06616 PKc_MKK4 Catalytic dom 99.9 2.3E-26 5.1E-31 257.9 14.6 245 219-588 13-273 (288)
367 PRK13184 pknD serine/threonine 99.9 1.3E-26 2.9E-31 286.9 13.7 259 220-583 12-286 (932)
368 cd06633 STKc_TAO3 Catalytic do 99.9 8.8E-26 1.9E-30 257.0 19.4 243 218-588 29-279 (313)
369 cd05095 PTKc_DDR2 Catalytic do 99.9 4.4E-26 9.5E-31 257.1 16.6 245 220-581 15-292 (296)
370 cd08225 STKc_Nek5 Catalytic do 99.9 2.6E-26 5.6E-31 252.5 14.2 241 221-585 11-257 (257)
371 cd06639 STKc_myosinIIIB Cataly 99.9 4.2E-26 9.2E-31 256.3 16.2 245 221-586 33-291 (291)
372 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 4.7E-26 1E-30 251.5 16.3 241 214-581 8-255 (260)
373 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 5.6E-26 1.2E-30 252.3 16.9 243 219-581 4-265 (269)
374 KOG1240 Protein kinase contain 99.9 1.1E-23 2.4E-28 252.5 37.3 324 764-1090 1034-1431(1431)
375 cd05066 PTKc_EphR_A Catalytic 99.9 4.2E-26 9.2E-31 253.0 15.7 243 221-581 15-261 (267)
376 cd05047 PTKc_Tie Catalytic dom 99.9 4.3E-26 9.3E-31 253.5 15.8 239 219-582 4-264 (270)
377 cd05118 STKc_CMGC Catalytic do 99.9 2.3E-26 5E-31 256.6 13.7 241 221-585 10-283 (283)
378 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 4.2E-26 9.1E-31 256.1 15.7 246 220-588 11-272 (287)
379 cd05086 PTKc_Aatyk2 Catalytic 99.9 6.5E-26 1.4E-30 251.9 17.0 242 220-581 5-264 (268)
380 cd05071 PTKc_Src Catalytic dom 99.9 5.8E-26 1.2E-30 251.4 16.5 241 214-581 8-255 (262)
381 cd07830 STKc_MAK_like Catalyti 99.9 4.8E-26 1E-30 254.4 16.0 242 219-585 8-283 (283)
382 cd07835 STKc_CDK1_like Catalyt 99.9 2.7E-26 5.8E-31 256.6 13.9 242 220-585 9-283 (283)
383 cd05578 STKc_Yank1 Catalytic d 99.9 1.9E-26 4.1E-31 254.2 12.5 239 221-585 11-258 (258)
384 cd08222 STKc_Nek11 Catalytic d 99.9 3.5E-26 7.6E-31 252.4 14.6 246 219-585 9-260 (260)
385 cd06657 STKc_PAK4 Catalytic do 99.9 5.1E-26 1.1E-30 256.3 16.2 248 216-591 26-279 (292)
386 PLN00009 cyclin-dependent kina 99.9 2.6E-26 5.6E-31 258.5 13.6 246 221-590 13-292 (294)
387 cd05065 PTKc_EphR_B Catalytic 99.9 5.3E-26 1.1E-30 252.4 15.9 246 221-582 15-264 (269)
388 cd06626 STKc_MEKK4 Catalytic d 99.9 5.3E-26 1.2E-30 251.0 15.8 246 220-585 10-264 (264)
389 cd05043 PTK_Ryk Pseudokinase d 99.9 4.9E-26 1.1E-30 254.2 15.5 245 220-581 16-271 (280)
390 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 6.4E-26 1.4E-30 253.8 16.5 249 219-582 13-279 (284)
391 cd05100 PTKc_FGFR3 Catalytic d 99.9 5.9E-26 1.3E-30 260.8 16.6 246 220-583 22-290 (334)
392 cd05051 PTKc_DDR Catalytic dom 99.9 5.3E-26 1.2E-30 255.9 15.7 252 214-582 7-293 (296)
393 KOG0671 LAMMER dual specificit 99.9 4.5E-27 9.8E-32 255.4 6.7 196 307-589 169-413 (415)
394 cd06635 STKc_TAO1 Catalytic do 99.9 2.1E-25 4.6E-30 254.3 20.8 247 214-588 27-283 (317)
395 cd07851 STKc_p38 Catalytic dom 99.9 3.4E-26 7.4E-31 263.8 14.4 250 220-592 25-308 (343)
396 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 6.3E-26 1.4E-30 250.9 16.0 239 220-581 12-260 (267)
397 cd05083 PTKc_Chk Catalytic dom 99.9 7.1E-26 1.5E-30 249.2 16.2 237 213-582 7-250 (254)
398 KOG0264 Nucleosome remodeling 99.9 4.8E-25 1E-29 242.7 22.3 261 825-1092 121-404 (422)
399 KOG0193 Serine/threonine prote 99.9 1.2E-26 2.7E-31 264.1 10.2 239 219-582 401-649 (678)
400 cd08215 STKc_Nek Catalytic dom 99.9 5.2E-26 1.1E-30 249.3 14.9 241 221-585 11-258 (258)
401 cd05069 PTKc_Yes Catalytic dom 99.9 7.4E-26 1.6E-30 250.1 16.1 236 219-581 15-255 (260)
402 KOG0690 Serine/threonine prote 99.9 9.9E-27 2.1E-31 245.8 8.5 248 213-588 169-430 (516)
403 cd07858 STKc_TEY_MAPK_plant Ca 99.9 4.4E-26 9.5E-31 262.3 14.6 253 221-593 16-302 (337)
404 PTZ00421 coronin; Provisional 99.9 5.2E-24 1.1E-28 253.4 32.7 234 775-1017 71-314 (493)
405 KOG1036 Mitotic spindle checkp 99.9 4.2E-24 9E-29 225.0 27.9 273 777-1082 11-294 (323)
406 KOG0305 Anaphase promoting com 99.9 3.1E-24 6.7E-29 246.8 29.3 273 741-1038 184-463 (484)
407 smart00219 TyrKc Tyrosine kina 99.9 9.2E-26 2E-30 247.8 16.2 243 220-581 9-256 (258)
408 cd05112 PTKc_Itk Catalytic dom 99.9 7.4E-26 1.6E-30 249.0 14.8 236 221-582 15-254 (256)
409 cd05082 PTKc_Csk Catalytic dom 99.9 9.8E-26 2.1E-30 248.4 15.7 230 221-581 17-251 (256)
410 cd06606 STKc_MAPKKK Catalytic 99.9 7.8E-26 1.7E-30 247.8 14.8 246 220-585 10-260 (260)
411 cd07854 STKc_MAPK4_6 Catalytic 99.9 6.2E-26 1.3E-30 261.6 14.7 257 220-589 15-307 (342)
412 cd07834 STKc_MAPK Catalytic do 99.9 7E-26 1.5E-30 259.4 15.0 256 220-592 10-299 (330)
413 PTZ00024 cyclin-dependent prot 99.9 6.5E-26 1.4E-30 260.4 14.6 261 219-590 18-321 (335)
414 cd05122 PKc_STE Catalytic doma 99.9 9E-26 2E-30 246.2 15.0 239 220-584 10-253 (253)
415 cd07877 STKc_p38alpha_MAPK14 C 99.9 8E-26 1.7E-30 261.0 15.3 251 220-593 27-311 (345)
416 cd07842 STKc_CDK8_like Catalyt 99.9 3.2E-26 7E-31 260.0 11.8 249 220-585 10-316 (316)
417 cd05057 PTKc_EGFR_like Catalyt 99.9 1.3E-25 2.9E-30 250.7 16.5 244 219-581 16-263 (279)
418 KOG0574 STE20-like serine/thre 99.9 4.2E-27 9.1E-32 246.1 4.1 248 214-589 35-290 (502)
419 KOG1187 Serine/threonine prote 99.9 5.5E-26 1.2E-30 261.1 13.7 249 209-582 75-348 (361)
420 cd06634 STKc_TAO2 Catalytic do 99.9 1.5E-25 3.2E-30 254.5 17.0 248 213-588 16-273 (308)
421 cd07866 STKc_BUR1 Catalytic do 99.9 8.7E-26 1.9E-30 255.7 15.0 261 220-585 18-311 (311)
422 cd07857 STKc_MPK1 Catalytic do 99.9 9.9E-26 2.2E-30 258.7 15.7 256 221-591 11-301 (332)
423 cd06653 STKc_MEKK3_like_1 Cata 99.9 1.3E-25 2.7E-30 248.8 15.8 246 220-585 12-264 (264)
424 cd05039 PTKc_Csk_like Catalyti 99.9 1.3E-25 2.8E-30 247.3 15.6 231 221-582 17-252 (256)
425 cd07879 STKc_p38delta_MAPK13 C 99.9 9.7E-26 2.1E-30 260.0 15.3 248 221-592 26-307 (342)
426 cd05046 PTK_CCK4 Pseudokinase 99.9 2.1E-25 4.5E-30 248.3 17.1 244 220-582 15-272 (275)
427 cd07829 STKc_CDK_like Catalyti 99.9 1.4E-25 3.1E-30 250.1 15.8 243 219-585 8-282 (282)
428 cd06627 STKc_Cdc7_like Catalyt 99.9 1.4E-25 3.1E-30 245.7 15.5 241 220-585 10-254 (254)
429 KOG0270 WD40 repeat-containing 99.9 1.3E-24 2.9E-29 237.8 22.7 274 756-1042 152-455 (463)
430 cd07833 STKc_CDKL Catalytic do 99.9 9.9E-26 2.2E-30 252.4 14.5 243 220-585 11-288 (288)
431 KOG1095 Protein tyrosine kinas 99.9 6.8E-26 1.5E-30 278.4 14.1 242 221-581 703-956 (1025)
432 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 1.7E-25 3.6E-30 249.9 16.1 248 221-582 15-279 (284)
433 cd05610 STKc_MASTL Catalytic d 99.9 1.1E-25 2.4E-30 280.4 16.2 140 220-380 14-155 (669)
434 KOG0305 Anaphase promoting com 99.9 4.6E-24 9.9E-29 245.4 28.0 270 785-1092 183-461 (484)
435 cd06618 PKc_MKK7 Catalytic dom 99.9 1.4E-25 3.1E-30 252.9 15.3 253 211-588 14-279 (296)
436 KOG0772 Uncharacterized conser 99.9 1E-24 2.2E-29 241.2 21.2 298 726-1035 163-486 (641)
437 KOG0612 Rho-associated, coiled 99.9 2.6E-26 5.5E-31 276.1 9.3 197 271-588 134-344 (1317)
438 cd05067 PTKc_Lck_Blk Catalytic 99.9 2.3E-25 4.9E-30 246.0 16.1 236 219-581 15-255 (260)
439 KOG0269 WD40 repeat-containing 99.9 5.6E-25 1.2E-29 253.8 19.7 286 781-1087 41-335 (839)
440 cd07852 STKc_MAPK15 Catalytic 99.9 1.5E-25 3.2E-30 257.8 15.0 259 214-591 9-304 (337)
441 KOG0983 Mitogen-activated prot 99.9 5.5E-26 1.2E-30 235.8 10.1 240 223-588 105-355 (391)
442 PF07714 Pkinase_Tyr: Protein 99.9 3.2E-26 6.9E-31 253.3 8.9 243 221-581 10-257 (259)
443 cd05073 PTKc_Hck Catalytic dom 99.9 3.1E-25 6.6E-30 245.1 16.6 235 220-581 16-255 (260)
444 cd05034 PTKc_Src_like Catalyti 99.9 2.3E-25 4.9E-30 245.9 15.2 235 221-581 17-256 (261)
445 KOG0607 MAP kinase-interacting 99.9 7.2E-26 1.6E-30 239.3 10.5 267 211-592 75-371 (463)
446 cd07840 STKc_CDK9_like Catalyt 99.9 1.7E-25 3.7E-30 250.0 14.0 243 220-585 9-287 (287)
447 cd07838 STKc_CDK4_6_like Catal 99.9 2.5E-25 5.5E-30 248.8 15.4 245 221-585 10-287 (287)
448 cd08530 STKc_CNK2-like Catalyt 99.9 2.2E-25 4.8E-30 244.7 14.6 239 221-585 11-256 (256)
449 cd05581 STKc_PDK1 Catalytic do 99.9 1.9E-25 4.2E-30 248.6 13.6 260 219-585 10-280 (280)
450 KOG2096 WD40 repeat protein [G 99.9 1.6E-23 3.4E-28 220.2 26.1 297 772-1090 79-400 (420)
451 KOG1027 Serine/threonine prote 99.9 1E-25 2.2E-30 264.7 10.8 237 222-588 522-773 (903)
452 PTZ00420 coronin; Provisional 99.9 6.1E-23 1.3E-27 245.3 34.6 223 847-1091 50-292 (568)
453 cd07864 STKc_CDK12 Catalytic d 99.9 3.1E-25 6.6E-30 250.5 14.2 258 214-585 9-302 (302)
454 KOG1332 Vesicle coat complex C 99.9 3E-24 6.5E-29 218.8 19.3 247 826-1090 9-284 (299)
455 cd05613 STKc_MSK1_N N-terminal 99.9 3.9E-25 8.4E-30 248.4 14.3 250 219-589 9-275 (290)
456 KOG1407 WD40 repeat protein [F 99.9 9.6E-24 2.1E-28 217.1 22.9 239 823-1087 15-256 (313)
457 cd05074 PTKc_Tyro3 Catalytic d 99.9 9.9E-25 2.2E-29 242.4 16.6 251 219-582 8-268 (273)
458 KOG4250 TANK binding protein k 99.9 2.5E-25 5.5E-30 258.2 11.9 192 219-528 22-220 (732)
459 cd05123 STKc_AGC Catalytic dom 99.9 6.6E-25 1.4E-29 240.3 14.5 240 220-585 3-250 (250)
460 KOG0308 Conserved WD40 repeat- 99.9 2E-24 4.4E-29 244.9 18.7 249 778-1039 20-288 (735)
461 KOG1026 Nerve growth factor re 99.9 3.1E-25 6.7E-30 263.6 11.6 241 222-581 498-757 (774)
462 KOG0294 WD40 repeat-containing 99.9 4.7E-23 1E-27 217.0 26.6 243 774-1038 38-283 (362)
463 PHA02882 putative serine/threo 99.9 7.2E-25 1.6E-29 247.2 14.0 176 306-581 105-291 (294)
464 KOG0194 Protein tyrosine kinas 99.9 2.2E-25 4.8E-30 257.6 9.9 243 220-581 167-415 (474)
465 KOG0283 WD40 repeat-containing 99.9 7.1E-24 1.5E-28 248.9 22.4 245 826-1091 265-575 (712)
466 KOG0275 Conserved WD40 repeat- 99.9 2.7E-24 5.9E-29 225.4 15.9 275 742-1034 221-507 (508)
467 KOG0641 WD40 repeat protein [G 99.9 6E-22 1.3E-26 199.1 31.7 291 777-1091 30-348 (350)
468 cd05583 STKc_MSK_N N-terminal 99.9 8.4E-25 1.8E-29 245.4 12.4 248 220-588 10-272 (288)
469 KOG0288 WD40 repeat protein Ti 99.9 1.9E-23 4.1E-28 226.6 22.3 260 749-1033 192-458 (459)
470 KOG4283 Transcription-coupled 99.9 6.3E-23 1.4E-27 213.6 25.2 298 776-1091 40-364 (397)
471 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 9.9E-25 2.2E-29 250.1 13.2 247 219-593 19-299 (328)
472 KOG0278 Serine/threonine kinas 99.9 4.7E-24 1E-28 217.5 16.4 267 747-1040 32-301 (334)
473 KOG2055 WD40 repeat protein [G 99.9 1.6E-22 3.4E-27 222.1 29.1 292 778-1091 212-511 (514)
474 cd08528 STKc_Nek10 Catalytic d 99.9 3.2E-24 7E-29 238.0 16.1 241 219-582 9-266 (269)
475 smart00220 S_TKc Serine/Threon 99.9 2.7E-24 6E-29 232.6 14.0 239 222-585 1-244 (244)
476 KOG0696 Serine/threonine prote 99.9 1.4E-24 3.1E-29 235.4 11.1 178 305-588 427-612 (683)
477 KOG0614 cGMP-dependent protein 99.9 6.9E-25 1.5E-29 243.7 8.5 210 257-588 465-683 (732)
478 KOG0641 WD40 repeat protein [G 99.9 1.6E-21 3.5E-26 196.0 31.4 285 741-1035 39-348 (350)
479 KOG0643 Translation initiation 99.9 2E-22 4.3E-27 207.9 25.5 238 821-1083 3-252 (327)
480 KOG1408 WD40 repeat protein [F 99.9 1.2E-22 2.7E-27 230.9 26.3 281 784-1091 329-712 (1080)
481 KOG0973 Histone transcription 99.9 1.2E-22 2.7E-27 243.8 26.8 274 752-1037 35-356 (942)
482 KOG4236 Serine/threonine prote 99.9 1E-24 2.2E-29 242.5 7.3 243 223-589 577-826 (888)
483 KOG0300 WD40 repeat-containing 99.9 1.1E-21 2.4E-26 205.5 29.4 300 724-1039 142-479 (481)
484 KOG1332 Vesicle coat complex C 99.9 5.5E-23 1.2E-27 209.6 18.5 252 776-1036 8-286 (299)
485 KOG0668 Casein kinase II, alph 99.9 5.4E-24 1.2E-28 216.0 10.6 209 260-590 80-330 (338)
486 KOG1539 WD repeat protein [Gen 99.9 2.9E-21 6.3E-26 224.8 34.5 315 745-1090 173-646 (910)
487 KOG0640 mRNA cleavage stimulat 99.9 1.2E-22 2.6E-27 212.6 20.6 279 742-1036 120-426 (430)
488 KOG0308 Conserved WD40 repeat- 99.9 7.8E-23 1.7E-27 232.1 20.8 330 746-1092 39-393 (735)
489 KOG0289 mRNA splicing factor [ 99.9 9.2E-21 2E-25 206.7 35.5 270 745-1035 232-505 (506)
490 KOG1034 Transcriptional repres 99.9 3.4E-22 7.4E-27 211.5 23.6 304 774-1092 33-383 (385)
491 KOG0664 Nemo-like MAPK-related 99.9 1.3E-24 2.8E-29 224.9 5.1 251 221-590 64-351 (449)
492 KOG0301 Phospholipase A2-activ 99.9 2.8E-22 6.1E-27 229.3 24.3 257 747-1036 28-288 (745)
493 KOG0639 Transducin-like enhanc 99.9 2.4E-22 5.1E-27 221.4 21.3 286 775-1092 415-704 (705)
494 smart00750 KIND kinase non-cat 99.9 2.4E-23 5.1E-28 216.0 12.4 160 313-588 1-171 (176)
495 KOG1063 RNA polymerase II elon 99.9 1.6E-21 3.6E-26 222.9 28.0 341 725-1091 186-647 (764)
496 KOG0647 mRNA export protein (c 99.9 7E-22 1.5E-26 207.2 22.9 251 827-1090 26-279 (347)
497 KOG0639 Transducin-like enhanc 99.9 1.5E-22 3.3E-27 222.8 18.5 275 742-1035 428-703 (705)
498 KOG0321 WD40 repeat-containing 99.9 4.7E-22 1E-26 225.5 22.7 285 784-1091 54-390 (720)
499 KOG0608 Warts/lats-like serine 99.9 1.1E-23 2.4E-28 238.7 9.0 247 265-592 682-938 (1034)
500 KOG2048 WD40 repeat protein [G 99.9 8.3E-21 1.8E-25 217.3 32.0 283 777-1088 23-315 (691)
No 1
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=1.2e-78 Score=771.74 Aligned_cols=715 Identities=43% Similarity=0.697 Sum_probs=525.1
Q ss_pred ccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccccccccC
Q 001366 306 QGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASL 385 (1092)
Q Consensus 306 ~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~ 385 (1092)
.|.++.+++|++||......++..+++.||+||++||+|||++||+||||||+||||+..|.+|++|||++...... ..
T Consensus 57 ~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~-~~ 135 (793)
T PLN00181 57 RALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD-ED 135 (793)
T ss_pred hhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCccccc-cc
Confidence 45556688999999876667888899999999999999999999999999999999999999999999998765421 11
Q ss_pred CCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccC
Q 001366 386 DIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNA 465 (1092)
Q Consensus 386 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 465 (1092)
...++.||+++++...... ...+.
T Consensus 136 ~~~ki~DfG~a~~~~~~~~----------------------------------------------------~~~~~---- 159 (793)
T PLN00181 136 ATTKSREIGSSRREEILSE----------------------------------------------------RRIEK---- 159 (793)
T ss_pred Ccccccccccccccccccc----------------------------------------------------cchhh----
Confidence 2233444444433110000 00000
Q ss_pred CCCCccCCCCCccccccccc-ccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcHHHHHHHHHhccc
Q 001366 466 GFGNYSKSSSPLVSNTAQQQ-STSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRD 544 (1092)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~~~~~~~~~~~~~ 544 (1092)
.......+ .......+||+||||||++.+..|+.++|||||||+||||++++++.......+..+..
T Consensus 160 ------------~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~ 227 (793)
T PLN00181 160 ------------LEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRH 227 (793)
T ss_pred ------------hhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHH
Confidence 00000000 00112467999999999999999999999999999999999998776665556666666
Q ss_pred cCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhccch-HhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 001366 545 RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCA-EELLSSIDQDDSESELLLHFLISLEEEKQN 623 (1092)
Q Consensus 545 ~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~~~~-~~~~~~~~~~e~e~ell~efL~~lke~k~e 623 (1092)
..+|+......+.+..+|.+||+++|.+||++.|||+||||.+...... .+....+.+...+.+.+.+++...++++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 307 (793)
T PLN00181 228 RVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLEEREAAMELRDRIEEQELLLEFLFLIQQRKQE 307 (793)
T ss_pred hhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhhhHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 6667666566788899999999999999999999999999987644332 222222333334445556677777788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCC--------ccccccccccccccccccCCccchHHHHHHHHH
Q 001366 624 QASKLVGEIRSLEADIKEVERRHYLKKPLVDPSLQNESA--------PSRENRYFNEQLSSSEAQLSPISDANEMRLMRN 695 (1092)
Q Consensus 624 ~~~kL~~el~~le~Di~eve~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~~~ 695 (1092)
+..++..+++.++.||+++++|+........+....... ...++...++...+.-.......-..+.||+++
T Consensus 308 ~~~~~~~~~~~l~~~i~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~~~~~~~ 387 (793)
T PLN00181 308 AADKLQDTISLLSSDIDQVVKRQLVLQQKGSDVRSFLASRKRIRQGAETLAAEEENDDNSSKLDDTLESTLLESSRLMRN 387 (793)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccccccchhhhccccchhhccccccccccccccccccchhhhHHHHH
Confidence 999999999999999999998764432211110000000 000000000000000001111122347999999
Q ss_pred HHHHHHHHHhhcccccCCCCCcccc-----ccc----hhhhcc--chhhhhhcc-ccccCCCCcEEeEcCCeEEEEEccc
Q 001366 696 LNQLERAYFSMRSQIQLSDSDSTTR-----ADN----DLLRDR--ENLFLAQQD-QEIQNPTDRLGAFFDGLCKYARYSK 763 (1092)
Q Consensus 696 ~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~----~~l~~~--~~~~~~~~~-~~~~~~~~~l~~~~D~~~k~w~~~~ 763 (1092)
|++|+++||.+|+...........+ +.. ...... .+....... .....+.+.+..|++|.+++|++..
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 467 (793)
T PLN00181 388 LKKLESVYFATRYRQIKAAAAAEKPLARYYSALSENGRSSEKSSMSNPAKPPDFYINDSRQGGWIDPFLEGLCKYLSFSK 467 (793)
T ss_pred HHHHHHHHhhhhhccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhcccc
Confidence 9999999999987531111000000 000 000000 000000000 0000112234457799999999999
Q ss_pred ceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCE
Q 001366 764 FEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNY 843 (1092)
Q Consensus 764 ~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~ 843 (1092)
+.....++.+.+.+|.+.|++++|+|+|++||+||.|++|+||++..........+.+.....+...|.+++|++..+.+
T Consensus 468 ~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~ 547 (793)
T PLN00181 468 LRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQ 547 (793)
T ss_pred eEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCE
Confidence 98888888778889999999999999999999999999999999864222222233444555667889999999876889
Q ss_pred EEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEcc
Q 001366 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSA 923 (1092)
Q Consensus 844 LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp 923 (1092)
|++++.||+|+|||+.+++.+..+.+|...|++++|+|.++.+|+||+.|++|++||++++.++.++.....|+++.|++
T Consensus 548 las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~ 627 (793)
T PLN00181 548 VASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPS 627 (793)
T ss_pred EEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeC
Confidence 99999999999999999999999999999999999998678899999999999999999999999998888999999976
Q ss_pred CCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEc
Q 001366 924 HSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFS 1003 (1092)
Q Consensus 924 ~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~ 1003 (1092)
....+|++|+.||.|++||+++.+.++..+.+|...|.++.|.++.+|++++.|++|++||++.... .....++.++.
T Consensus 628 ~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~--~~~~~~l~~~~ 705 (793)
T PLN00181 628 ESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSIS--GINETPLHSFM 705 (793)
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCcc--ccCCcceEEEc
Confidence 5446999999999999999998766677888999999999999888999999999999999974321 11235678899
Q ss_pred CCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecC
Q 001366 1004 GHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSS 1083 (1092)
Q Consensus 1004 ~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~D 1083 (1092)
+|.+.+++++|+|++.+||+|+.|+.|++|+...+.++..+.+...+.+.+.. ...+...|++++|+|++.+|++|+.|
T Consensus 706 gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~V~~v~ws~~~~~lva~~~d 784 (793)
T PLN00181 706 GHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLE-VDDASQFISSVCWRGQSSTLVAANST 784 (793)
T ss_pred CCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccc-cCCCCcEEEEEEEcCCCCeEEEecCC
Confidence 99999999999999999999999999999999888888777765554444432 24567789999999999999999999
Q ss_pred CeEEEEEcC
Q 001366 1084 GCIKVLQMV 1092 (1092)
Q Consensus 1084 G~V~vW~lv 1092 (1092)
|.|+||+||
T Consensus 785 G~I~i~~~~ 793 (793)
T PLN00181 785 GNIKILEMV 793 (793)
T ss_pred CcEEEEecC
Confidence 999999997
No 2
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2.3e-42 Score=368.41 Aligned_cols=299 Identities=22% Similarity=0.374 Sum_probs=263.1
Q ss_pred cccceEEeeEE-eeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecC
Q 001366 761 YSKFEVQGMLR-TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNY 839 (1092)
Q Consensus 761 ~~~~~~~~~l~-~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~ 839 (1092)
...|.+....+ +..+.+|..+|-|++|+|+|..||+|+.|.++++||+.+. .......+|...|.||+|+||
T Consensus 96 qavfrvrpvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~Te-------Tp~~t~KgH~~WVlcvawsPD 168 (480)
T KOG0271|consen 96 QAVFRVRPVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTE-------TPLFTCKGHKNWVLCVAWSPD 168 (480)
T ss_pred chhhcccccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCC-------CcceeecCCccEEEEEEECCC
Confidence 34455555444 3568899999999999999999999999999999999861 223456789999999999999
Q ss_pred CCCEEEEEECCCcEEEEECCCCce-EEEeeccCccEEEEEEecCC----CCEEEEEeCCCcEEEEecCCCceeeeEe-cC
Q 001366 840 IKNYLASADYDGVVKLWDACTGQT-VSHYIEHEKRAWSVDFSQVH----PTKLASGSDDCSVKLWNINEKNSLATIK-NI 913 (1092)
Q Consensus 840 ~~~~LaSgs~DgtV~IWD~~tg~~-i~~l~~h~~~V~sv~fsp~~----~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~ 913 (1092)
+..||||+.||+|++||..+|++ ...|.+|.+.|++++|.|.+ ..+|||+|.||+|+|||+..+.++..+. |.
T Consensus 169 -gk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT 247 (480)
T KOG0271|consen 169 -GKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHT 247 (480)
T ss_pred -cchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCc
Confidence 99999999999999999999875 56799999999999998753 4579999999999999999999999887 67
Q ss_pred CceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC------------C-------------
Q 001366 914 ANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD------------S------------- 968 (1092)
Q Consensus 914 ~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~------------~------------- 968 (1092)
..|+|+.|-.+| ++++|+.|++|++|+...+. ....+.+|...|..++.+. +
T Consensus 248 ~~VTCvrwGG~g--liySgS~DrtIkvw~a~dG~-~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~A 324 (480)
T KOG0271|consen 248 ASVTCVRWGGEG--LIYSGSQDRTIKVWRALDGK-LCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKA 324 (480)
T ss_pred cceEEEEEcCCc--eEEecCCCceEEEEEccchh-HHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHH
Confidence 899999998776 89999999999999998865 4678899999999998751 1
Q ss_pred ------------CEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCC
Q 001366 969 ------------GTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRS 1036 (1092)
Q Consensus 969 ------------~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~ 1036 (1092)
+.|+|||.|.++.+|+-.. ..+++....+|...|+.+.||||++|||++|.|+.|++|+-.
T Consensus 325 l~rY~~~~~~~~erlVSgsDd~tlflW~p~~-------~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~ 397 (480)
T KOG0271|consen 325 LERYEAVLKDSGERLVSGSDDFTLFLWNPFK-------SKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGR 397 (480)
T ss_pred HHHHHHhhccCcceeEEecCCceEEEecccc-------cccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCC
Confidence 2499999999999999763 345778889999999999999999999999999999999999
Q ss_pred CCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1037 LPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1037 ~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
+|+.+.+++ +|-..|+.|+|+.|+++|++|+.|.+++||++
T Consensus 398 tGk~lasfR--------------GHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V 438 (480)
T KOG0271|consen 398 TGKFLASFR--------------GHVAAVYQVAWSADSRLLVSGSKDSTLKVWDV 438 (480)
T ss_pred Ccchhhhhh--------------hccceeEEEEeccCccEEEEcCCCceEEEEEe
Confidence 999887764 67889999999999999999999999999996
No 3
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.6e-42 Score=366.12 Aligned_cols=330 Identities=18% Similarity=0.252 Sum_probs=283.1
Q ss_pred hhhhccchhhhhhccccccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Q 001366 724 DLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKI 803 (1092)
Q Consensus 724 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I 803 (1092)
..+.+|.+.+..+++.. ......+++-|.++++|+...-... ....+|.+.|.|++|+|||+.||+|+.||+|
T Consensus 109 sS~~GH~e~Vl~~~fsp--~g~~l~tGsGD~TvR~WD~~TeTp~-----~t~KgH~~WVlcvawsPDgk~iASG~~dg~I 181 (480)
T KOG0271|consen 109 SSIAGHGEAVLSVQFSP--TGSRLVTGSGDTTVRLWDLDTETPL-----FTCKGHKNWVLCVAWSPDGKKIASGSKDGSI 181 (480)
T ss_pred cccCCCCCcEEEEEecC--CCceEEecCCCceEEeeccCCCCcc-----eeecCCccEEEEEEECCCcchhhccccCCeE
Confidence 34678888877766521 2233457789999999997654333 2456999999999999999999999999999
Q ss_pred EEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCC----CCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEE
Q 001366 804 KIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI----KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDF 879 (1092)
Q Consensus 804 ~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~----~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~f 879 (1092)
++||..+. ........+|+..|++++|.|-+ ..+||++|.||+|+|||+..++++..+.+|+.+|+||.|
T Consensus 182 ~lwdpktg------~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrw 255 (480)
T KOG0271|consen 182 RLWDPKTG------QQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRW 255 (480)
T ss_pred EEecCCCC------CcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEE
Confidence 99997652 23334566899999999998742 568999999999999999999999999999999999999
Q ss_pred ecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEc-----------cCCC---------------------
Q 001366 880 SQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFS-----------AHSS--------------------- 926 (1092)
Q Consensus 880 sp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fs-----------p~~~--------------------- 926 (1092)
-. ..+++|||.|++|++|+...|++..+++ |...|+.++.+ |.+.
T Consensus 256 GG--~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~ 333 (480)
T KOG0271|consen 256 GG--EGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLK 333 (480)
T ss_pred cC--CceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhc
Confidence 74 5689999999999999999999999998 45678877766 3332
Q ss_pred ---eEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEE
Q 001366 927 ---HLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTF 1002 (1092)
Q Consensus 927 ---~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l 1002 (1092)
..+++|+.|.++.+|+-...++++..+.+|+..|..+.|+ ++.+++|+|-|+.|++||-+ +++.+.+|
T Consensus 334 ~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~--------tGk~lasf 405 (480)
T KOG0271|consen 334 DSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGR--------TGKFLASF 405 (480)
T ss_pred cCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCC--------Ccchhhhh
Confidence 2499999999999999988888888999999999999999 66789999999999999999 56778899
Q ss_pred cCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEec
Q 001366 1003 SGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANS 1082 (1092)
Q Consensus 1003 ~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~ 1082 (1092)
.||-..|+.|+|+.|.++|++||.|.+++||++.+.+... .+.+|...|.++.|+|||..+++|+.
T Consensus 406 RGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~--------------DLpGh~DEVf~vDwspDG~rV~sggk 471 (480)
T KOG0271|consen 406 RGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQ--------------DLPGHADEVFAVDWSPDGQRVASGGK 471 (480)
T ss_pred hhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecc--------------cCCCCCceEEEEEecCCCceeecCCC
Confidence 9999999999999999999999999999999987665433 34688999999999999999999999
Q ss_pred CCeEEEEE
Q 001366 1083 SGCIKVLQ 1090 (1092)
Q Consensus 1083 DG~V~vW~ 1090 (1092)
|..+++|.
T Consensus 472 dkv~~lw~ 479 (480)
T KOG0271|consen 472 DKVLRLWR 479 (480)
T ss_pred ceEEEeec
Confidence 99999995
No 4
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=3e-41 Score=365.04 Aligned_cols=282 Identities=26% Similarity=0.333 Sum_probs=257.1
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecC-CCCEEEEEECCCcEEE
Q 001366 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNY-IKNYLASADYDGVVKL 855 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~-~~~~LaSgs~DgtV~I 855 (1092)
+.+.+|..+.|++|++.|||||.+|.++||+... ........+|.+.|.++.|+|. .+..+|||+.||+|++
T Consensus 173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~-------~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvkl 245 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQ-------CNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKL 245 (459)
T ss_pred cCCCcceeeEeecCCCeEEEeecCCceeEeecCC-------cceeEEEeccccceeeEEEccCCCccceeeeccCCceee
Confidence 5677899999999999999999999999999875 2344567899999999999997 3679999999999999
Q ss_pred EECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEEC
Q 001366 856 WDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSA 934 (1092)
Q Consensus 856 WD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~ 934 (1092)
|++.+...+..+.+|..+|..|+|+| +|.+|+|+|.|.+.++||++++..+.... |...|.+++|+|+|+ ++++|+.
T Consensus 246 w~~~~e~~l~~l~gH~~RVs~VafHP-sG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGS-L~~tGGl 323 (459)
T KOG0272|consen 246 WKLSQETPLQDLEGHLARVSRVAFHP-SGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGS-LAATGGL 323 (459)
T ss_pred eccCCCcchhhhhcchhhheeeeecC-CCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCc-eeeccCc
Confidence 99999899999999999999999999 99999999999999999999998776555 678899999999997 9999999
Q ss_pred CCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEE
Q 001366 935 DYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVG 1013 (1092)
Q Consensus 935 Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~ 1013 (1092)
|..-+|||+|+++. +..+.+|.+.|.+|+|+ +|..|+|||.|++++|||++. ..+++++.+|.+-|..|.
T Consensus 324 D~~~RvWDlRtgr~-im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~--------r~~ly~ipAH~nlVS~Vk 394 (459)
T KOG0272|consen 324 DSLGRVWDLRTGRC-IMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRM--------RSELYTIPAHSNLVSQVK 394 (459)
T ss_pred cchhheeecccCcE-EEEecccccceeeEeECCCceEEeecCCCCcEEEeeecc--------cccceecccccchhhheE
Confidence 99999999999975 67889999999999999 455699999999999999994 456889999999999999
Q ss_pred Eec-CCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1014 LST-ADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1014 ~sp-dg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
|+| .|.+|+++|.|++++||...+..++.+. .+|.+.|-++.+++|+..++|++.|.++++|.
T Consensus 395 ~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksL--------------aGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 395 YSPQEGYFLVTASYDNTVKIWSTRTWSPLKSL--------------AGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred ecccCCeEEEEcccCcceeeecCCCcccchhh--------------cCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 999 5789999999999999998888777643 58899999999999999999999999999995
No 5
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=2.2e-38 Score=342.90 Aligned_cols=267 Identities=21% Similarity=0.311 Sum_probs=241.5
Q ss_pred CCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCC--CCEEEEEeCCCcEEEEEcCCCCCCCcccccc
Q 001366 744 PTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRD--EDHFAAAGVSKKIKIFEFNALFNDSVDVYYP 821 (1092)
Q Consensus 744 ~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspd--g~~latgg~D~~I~Iwd~~~~~~~~~~~~~~ 821 (1092)
.+-.++++++|.+|+|...+..... .|.+|...|.++.|+|. +..+|||+.||++++|+++.. ...
T Consensus 187 s~~laT~swsG~~kvW~~~~~~~~~-----~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e-------~~l 254 (459)
T KOG0272|consen 187 SKHLATGSWSGLVKVWSVPQCNLLQ-----TLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQE-------TPL 254 (459)
T ss_pred CCeEEEeecCCceeEeecCCcceeE-----EEeccccceeeEEEccCCCccceeeeccCCceeeeccCCC-------cch
Confidence 3445688999999999977653332 46799999999999997 569999999999999998751 222
Q ss_pred eeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEec
Q 001366 822 AVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNI 901 (1092)
Q Consensus 822 ~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl 901 (1092)
....+|...|..|+|+|+ |.+|+|+|+|.+-++||+.+++.+....||...|.+++|++ +|.+++||+.|..-+|||+
T Consensus 255 ~~l~gH~~RVs~VafHPs-G~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~-DGSL~~tGGlD~~~RvWDl 332 (459)
T KOG0272|consen 255 QDLEGHLARVSRVAFHPS-GKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQP-DGSLAATGGLDSLGRVWDL 332 (459)
T ss_pred hhhhcchhhheeeeecCC-CceeeecccccchhhcccccchhhHhhcccccccceeEecC-CCceeeccCccchhheeec
Confidence 344578999999999998 99999999999999999999999989999999999999999 9999999999999999999
Q ss_pred CCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc--CCCEEEEEECCC
Q 001366 902 NEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL--DSGTLVTASTDN 978 (1092)
Q Consensus 902 ~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs--~~~~L~Sgs~Dg 978 (1092)
++++++..+. |...|.+|+|+|+| +.+|||+.|++++|||+|..+. +.++.+|.+-|+.|+|. .+.+|+|+|.|+
T Consensus 333 Rtgr~im~L~gH~k~I~~V~fsPNG-y~lATgs~Dnt~kVWDLR~r~~-ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~ 410 (459)
T KOG0272|consen 333 RTGRCIMFLAGHIKEILSVAFSPNG-YHLATGSSDNTCKVWDLRMRSE-LYTIPAHSNLVSQVKYSPQEGYFLVTASYDN 410 (459)
T ss_pred ccCcEEEEecccccceeeEeECCCc-eEEeecCCCCcEEEeeeccccc-ceecccccchhhheEecccCCeEEEEcccCc
Confidence 9999999998 67789999999999 7999999999999999998764 78999999999999999 466899999999
Q ss_pred eEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEe
Q 001366 979 KLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYH 1034 (1092)
Q Consensus 979 ~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd 1034 (1092)
+++||... ...+++++.||++.|.+++.++|+.+|+|+|.|+++++|.
T Consensus 411 t~kiWs~~--------~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 411 TVKIWSTR--------TWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred ceeeecCC--------CcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 99999988 5678899999999999999999999999999999999994
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-39 Score=351.47 Aligned_cols=262 Identities=18% Similarity=0.163 Sum_probs=199.0
Q ss_pred ccCCchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCch------hhHhhhhhhhhhccCCCCCCCccc
Q 001366 207 SKSGFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS------DAALKAAGAMMVASNASPKPVGVG 278 (1092)
Q Consensus 207 ~~~~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 278 (1092)
-++-+..|.+-++|+ +.|+|-+|... -.+..+|.||+...-... ....--++...|....||+|+...
T Consensus 167 pks~~d~yii~~~LGsGafg~Vkla~e~----~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~ 242 (475)
T KOG0615|consen 167 PKSFNDYYIISKTLGSGAFGLVKLAYEK----KTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIK 242 (475)
T ss_pred cchhcceeEeeeeecCCceeEEEEEEEc----ccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEe
Confidence 344455666666665 57899888873 346667776653222111 111123566678899999999876
Q ss_pred cceecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCC
Q 001366 279 TAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPS 358 (1092)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~ 358 (1092)
+-..-....++ +|||++||+|.+++-..+. +.+..++.+|+|||.||.|||++||+||||||+
T Consensus 243 d~f~~~ds~Ym----------------VlE~v~GGeLfd~vv~nk~-l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPe 305 (475)
T KOG0615|consen 243 DFFEVPDSSYM----------------VLEYVEGGELFDKVVANKY-LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPE 305 (475)
T ss_pred eeeecCCceEE----------------EEEEecCccHHHHHHhccc-cccchhHHHHHHHHHHHHHHHHcCcccccCCcc
Confidence 65544333342 8999999999999977765 555589999999999999999999999999999
Q ss_pred CeEEccC---CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccC
Q 001366 359 SFKLLQS---NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYG 435 (1092)
Q Consensus 359 Nill~~~---~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1092)
||||..+ ..+||+|||+|+..++
T Consensus 306 NILl~~~~e~~llKItDFGlAK~~g~------------------------------------------------------ 331 (475)
T KOG0615|consen 306 NILLSNDAEDCLLKITDFGLAKVSGE------------------------------------------------------ 331 (475)
T ss_pred eEEeccCCcceEEEecccchhhcccc------------------------------------------------------
Confidence 9999866 7899999999988651
Q ss_pred CcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC---CCcc
Q 001366 436 NKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV---CTTS 512 (1092)
Q Consensus 436 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~---~t~~ 512 (1092)
...+.+.||||.|.|||++.... +..+
T Consensus 332 --------------------------------------------------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~k 361 (475)
T KOG0615|consen 332 --------------------------------------------------GSFMKTLCGTPSYVAPEVLASKGVEYYPSK 361 (475)
T ss_pred --------------------------------------------------ceehhhhcCCccccChhheecCCeecccch
Confidence 11234789999999999998744 3458
Q ss_pred ccchhhhHHHHHHcCCCCcHHHHHHHH----Hhc--cccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001366 513 SNIYSLGVLFFELFGRFDSERALAAAM----SDL--RDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1092)
Q Consensus 513 sDIwSLGvll~ell~~f~~~~~~~~~~----~~~--~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~ 586 (1092)
+|||||||+||-+|+|++++.+....+ ..+ +....|+.+...+.+..+||.|||..||++|||+.|+|+||||+
T Consensus 362 VDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~ 441 (475)
T KOG0615|consen 362 VDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFK 441 (475)
T ss_pred heeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence 999999999999999876665433322 222 33345778888899999999999999999999999999999999
Q ss_pred hhhccch
Q 001366 587 EFQEVCA 593 (1092)
Q Consensus 587 ~~~~~~~ 593 (1092)
..+....
T Consensus 442 ~~~~~s~ 448 (475)
T KOG0615|consen 442 DAPCLSK 448 (475)
T ss_pred cccccch
Confidence 8764443
No 7
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-38 Score=341.06 Aligned_cols=251 Identities=21% Similarity=0.224 Sum_probs=200.8
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCC-CCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGS-LDL 289 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 289 (1092)
+....+.++ -.|+|||..-. -.+...|.|+........-.+.-.++...+++.++|+|+..+.+..++.. ..
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk----~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~is- 154 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHK----PTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEIS- 154 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEc----CCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEE-
Confidence 333344443 46999998763 23444445555444444556667888888999999999998888776664 33
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhh-cCccccCCCCCCeEEccCCcE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs-~gIvHrDLKP~Nill~~~~~v 368 (1092)
+.|||++||+|.++++..++ +++...-.|++|+++||.|||. ++||||||||+|||+...|.|
T Consensus 155 ---------------I~mEYMDgGSLd~~~k~~g~-i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeV 218 (364)
T KOG0581|consen 155 ---------------ICMEYMDGGSLDDILKRVGR-IPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEV 218 (364)
T ss_pred ---------------eehhhcCCCCHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCE
Confidence 27999999999999988765 5555888999999999999995 999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||.++.+..+
T Consensus 219 KicDFGVS~~lvnS------------------------------------------------------------------ 232 (364)
T KOG0581|consen 219 KICDFGVSGILVNS------------------------------------------------------------------ 232 (364)
T ss_pred EeccccccHHhhhh------------------------------------------------------------------
Confidence 99999999886621
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~ 528 (1092)
-..+.+||..|||||.+.+..|+.++||||||+.|+|++.|
T Consensus 233 ---------------------------------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~G 273 (364)
T KOG0581|consen 233 ---------------------------------------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIG 273 (364)
T ss_pred ---------------------------------------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhC
Confidence 01278999999999999999999999999999999999986
Q ss_pred ---CCc----HHHHHHHHHhccccCCCCCCCC-CChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 529 ---FDS----ERALAAAMSDLRDRILPPSFLS-ENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 529 ---f~~----~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
|.+ ..+....+..+...+.|..... .++++++|+..||++||..||++.|+|+|||+....
T Consensus 274 rfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~ 342 (364)
T KOG0581|consen 274 RFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE 342 (364)
T ss_pred CCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence 333 2356666777666555544443 789999999999999999999999999999998753
No 8
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=2.4e-35 Score=306.23 Aligned_cols=289 Identities=20% Similarity=0.258 Sum_probs=247.6
Q ss_pred hhhhccchhhhhhccccccCCCC--cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCC
Q 001366 724 DLLRDRENLFLAQQDQEIQNPTD--RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSK 801 (1092)
Q Consensus 724 ~~l~~~~~~~~~~~~~~~~~~~~--~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~ 801 (1092)
.+|++|.+-+.+. .|.++. .++++.||.+.+|+-.. ..+.+.+.-....|-.++|+|.|+++|+||.|+
T Consensus 49 r~LkGH~~Ki~~~----~ws~Dsr~ivSaSqDGklIvWDs~T-----tnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN 119 (343)
T KOG0286|consen 49 RTLKGHLNKIYAM----DWSTDSRRIVSASQDGKLIVWDSFT-----TNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDN 119 (343)
T ss_pred EEecccccceeee----EecCCcCeEEeeccCCeEEEEEccc-----ccceeEEecCceeEEEEEECCCCCeEEecCcCc
Confidence 5688998877664 345554 46899999999999533 223344556788999999999999999999999
Q ss_pred cEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEec
Q 001366 802 KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQ 881 (1092)
Q Consensus 802 ~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp 881 (1092)
...||++..... +..........+|.+.++|+.|-++ ..|+|+|.|.++.+||+++|+.+..|.+|.+.|.+++++|
T Consensus 120 ~Csiy~ls~~d~-~g~~~v~r~l~gHtgylScC~f~dD--~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p 196 (343)
T KOG0286|consen 120 KCSIYPLSTRDA-EGNVRVSRELAGHTGYLSCCRFLDD--NHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSP 196 (343)
T ss_pred eeEEEecccccc-cccceeeeeecCccceeEEEEEcCC--CceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCC
Confidence 999999985321 1222233446789999999999884 6889999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEec--CCCC
Q 001366 882 VHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLA--GHEK 958 (1092)
Q Consensus 882 ~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~--~H~~ 958 (1092)
.+++.++||+-|++.++||++.+.++++|. |.+.|++|.|.|+|. -|++|+.|++.++||+|.... +..+. .-..
T Consensus 197 ~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~-afatGSDD~tcRlyDlRaD~~-~a~ys~~~~~~ 274 (343)
T KOG0286|consen 197 SDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGD-AFATGSDDATCRLYDLRADQE-LAVYSHDSIIC 274 (343)
T ss_pred CCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCC-eeeecCCCceeEEEeecCCcE-EeeeccCcccC
Confidence 889999999999999999999999999998 678999999999994 899999999999999998754 34443 2346
Q ss_pred CeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEe
Q 001366 959 AVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYH 1034 (1092)
Q Consensus 959 ~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd 1034 (1092)
.|++|+|+ .+.+|++|..|.++.+||.- .+..+..+.+|.+.|.++..+|||..+++||.|.+++||.
T Consensus 275 gitSv~FS~SGRlLfagy~d~~c~vWDtl--------k~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 275 GITSVAFSKSGRLLFAGYDDFTCNVWDTL--------KGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred CceeEEEcccccEEEeeecCCceeEeecc--------ccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 89999999 88889999999999999987 3566788999999999999999999999999999999994
No 9
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.8e-38 Score=329.09 Aligned_cols=248 Identities=16% Similarity=0.186 Sum_probs=199.6
Q ss_pred hhhccccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCC
Q 001366 217 KTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 217 ~~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
|..-+..|||||-+. +.+++.+|+|.|+... ...-...+.|+.+++...+|||++.+++..--+.-..
T Consensus 9 kvGEGSYGvV~KCrn----k~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklh------- 77 (396)
T KOG0593|consen 9 KVGEGSYGVVMKCRN----KDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLH------- 77 (396)
T ss_pred ccccCcceEEEEecc----CCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeE-------
Confidence 344556899999887 5578889998876433 3444566889999999999999999888866544443
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
++.|||+..=|.++=+.. .-++..-+..|+.|++.|+.|||++++|||||||+||||+.+|.+|++|||.
T Consensus 78 ---------LVFE~~dhTvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGF 147 (396)
T KOG0593|consen 78 ---------LVFEYCDHTVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGF 147 (396)
T ss_pred ---------EEeeecchHHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchh
Confidence 278999987777654444 3456658999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
||.+.+++
T Consensus 148 AR~L~~pg------------------------------------------------------------------------ 155 (396)
T KOG0593|consen 148 ARTLSAPG------------------------------------------------------------------------ 155 (396)
T ss_pred hHhhcCCc------------------------------------------------------------------------
Confidence 99876321
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCc
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDS 531 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~ 531 (1092)
..+|.++-|+||+|||++.| ..|+.++||||+||++.||++| |++
T Consensus 156 -------------------------------d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG 204 (396)
T KOG0593|consen 156 -------------------------------DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPG 204 (396)
T ss_pred -------------------------------chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCC
Confidence 12347789999999999999 7899999999999999999997 888
Q ss_pred HHHHHHHHHhccc-cC-------------------CC---------CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 532 ERALAAAMSDLRD-RI-------------------LP---------PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 532 ~~~~~~~~~~~~~-~~-------------------~p---------~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
..+..+.+.+.+. +. +| ..++..+.-..+|+..||+.||.+|++.+++|+|
T Consensus 205 ~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 205 RSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred cchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 8888777655432 11 11 1245556667899999999999999999999999
Q ss_pred hhhhhh
Q 001366 583 EVTNEF 588 (1092)
Q Consensus 583 ~~~~~~ 588 (1092)
+||...
T Consensus 285 ~yFd~~ 290 (396)
T KOG0593|consen 285 PYFDGF 290 (396)
T ss_pred hHHHHH
Confidence 999554
No 10
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.4e-37 Score=321.92 Aligned_cols=251 Identities=15% Similarity=0.162 Sum_probs=209.3
Q ss_pred ccceeeeCCCCCccccccccccc-cccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 222 GKGIVCRGPPLNAFKERRGMIDT-KAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
-.|+||+|.. ..+++++|. ||+.+.-.+.-...+.|+.+++...+|+||+.+++...+..+..+
T Consensus 14 ~~gvVyka~d----~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~l----------- 78 (318)
T KOG0659|consen 14 TYGVVYKARD----TETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSL----------- 78 (318)
T ss_pred ceEEEEEEEe----cCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEE-----------
Confidence 3799999997 445777777 888887777777889999999999999999999999776665552
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
+.||+ -.+|...|+.....+...++..++.|++.||+|||++.|+||||||.|+||+++|.+|++|||+++.+.
T Consensus 79 -----VfEfm-~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~ 152 (318)
T KOG0659|consen 79 -----VFEFM-PTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFG 152 (318)
T ss_pred -----EEEec-cccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccC
Confidence 45555 469999999999999999999999999999999999999999999999999999999999999999866
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
.+.
T Consensus 153 ~p~----------------------------------------------------------------------------- 155 (318)
T KOG0659|consen 153 SPN----------------------------------------------------------------------------- 155 (318)
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 211
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHHHH
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALA 536 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~~~ 536 (1092)
...+..+-|+||+|||++.| ..|+..+||||.|||+.||+-+ |++..+..
T Consensus 156 --------------------------~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDid 209 (318)
T KOG0659|consen 156 --------------------------RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDID 209 (318)
T ss_pred --------------------------cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHH
Confidence 11123478999999999999 6799999999999999999975 78888887
Q ss_pred HHHHhcccc---------------------CCC-----CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 537 AAMSDLRDR---------------------ILP-----PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 537 ~~~~~~~~~---------------------~~p-----~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
+.-...+.- ..| ..|+..+..+.+|+..||.+||.+|+|+.|+|+|+||...+.
T Consensus 210 QL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~ 289 (318)
T KOG0659|consen 210 QLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPL 289 (318)
T ss_pred HHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCC
Confidence 775554421 111 125667788899999999999999999999999999998777
Q ss_pred cchHhh
Q 001366 591 VCAEEL 596 (1092)
Q Consensus 591 ~~~~~~ 596 (1092)
+.....
T Consensus 290 pt~~~~ 295 (318)
T KOG0659|consen 290 PTPPSK 295 (318)
T ss_pred CCChhh
Confidence 665433
No 11
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-35 Score=300.65 Aligned_cols=299 Identities=21% Similarity=0.341 Sum_probs=248.8
Q ss_pred eeeecCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECC
Q 001366 772 TGEFNNSANVICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYD 850 (1092)
Q Consensus 772 ~~~l~~h~~~V~sl~fspd-g~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~D 850 (1092)
.+.+.+|.+.|+.++..+. .+.+++++.|+++.+|++.... ..-........+|...|..+..+++ +++.+|+|+|
T Consensus 8 ~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd--~~~G~~~r~~~GHsH~v~dv~~s~d-g~~alS~swD 84 (315)
T KOG0279|consen 8 RGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDD--IKYGVPVRRLTGHSHFVSDVVLSSD-GNFALSASWD 84 (315)
T ss_pred eeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCc--cccCceeeeeeccceEecceEEccC-CceEEecccc
Confidence 4567899999999999886 5689999999999999998631 1112223445689999999999998 9999999999
Q ss_pred CcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-c--CCceEEEEEccCC-C
Q 001366 851 GVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-N--IANVCCVQFSAHS-S 926 (1092)
Q Consensus 851 gtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~--~~~V~sl~fsp~~-~ 926 (1092)
+++++||+.+|+..+.|.+|+..|.+++|++ +..+++|||.|.+|++|++-. .+..++. . ..-|.|+.|+|+. .
T Consensus 85 ~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~-dn~qivSGSrDkTiklwnt~g-~ck~t~~~~~~~~WVscvrfsP~~~~ 162 (315)
T KOG0279|consen 85 GTLRLWDLATGESTRRFVGHTKDVLSVAFST-DNRQIVSGSRDKTIKLWNTLG-VCKYTIHEDSHREWVSCVRFSPNESN 162 (315)
T ss_pred ceEEEEEecCCcEEEEEEecCCceEEEEecC-CCceeecCCCcceeeeeeecc-cEEEEEecCCCcCcEEEEEEcCCCCC
Confidence 9999999999999999999999999999999 889999999999999999984 4555554 2 5679999999984 3
Q ss_pred eEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCC
Q 001366 927 HLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGH 1005 (1092)
Q Consensus 927 ~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h 1005 (1092)
.+|++++.|++|++||+++.+ ....+.+|++.++.+.++ ++..+++|+.||.+.+||++ .+++++++ +|
T Consensus 163 p~Ivs~s~DktvKvWnl~~~~-l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~--------~~k~lysl-~a 232 (315)
T KOG0279|consen 163 PIIVSASWDKTVKVWNLRNCQ-LRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLN--------EGKNLYSL-EA 232 (315)
T ss_pred cEEEEccCCceEEEEccCCcc-hhhccccccccEEEEEECCCCCEEecCCCCceEEEEEcc--------CCceeEec-cC
Confidence 589999999999999999875 456788999999999999 66788999999999999999 45566666 47
Q ss_pred CCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCe
Q 001366 1006 TNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGC 1085 (1092)
Q Consensus 1006 ~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~ 1085 (1092)
...|++++|+|+.-+|+.+ .+..|+|||..++..+...+.....+ ..........+++|++||..|.+|-.|+.
T Consensus 233 ~~~v~sl~fspnrywL~~a-t~~sIkIwdl~~~~~v~~l~~d~~g~-----s~~~~~~~clslaws~dG~tLf~g~td~~ 306 (315)
T KOG0279|consen 233 FDIVNSLCFSPNRYWLCAA-TATSIKIWDLESKAVVEELKLDGIGP-----SSKAGDPICLSLAWSADGQTLFAGYTDNV 306 (315)
T ss_pred CCeEeeEEecCCceeEeec-cCCceEEEeccchhhhhhcccccccc-----ccccCCcEEEEEEEcCCCcEEEeeecCCc
Confidence 7889999999987555544 45569999999998887776421111 11222345788999999999999999999
Q ss_pred EEEEEc
Q 001366 1086 IKVLQM 1091 (1092)
Q Consensus 1086 V~vW~l 1091 (1092)
|++|++
T Consensus 307 irv~qv 312 (315)
T KOG0279|consen 307 IRVWQV 312 (315)
T ss_pred EEEEEe
Confidence 999986
No 12
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=6.1e-35 Score=304.56 Aligned_cols=290 Identities=23% Similarity=0.309 Sum_probs=255.4
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.+.+|.+.|..+.|+|+|.+|||||.|..|.+|++.... ..-....+|.+.|..+.|.++ ++.|+|+|.|++|
T Consensus 42 ~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdc------eN~~~lkgHsgAVM~l~~~~d-~s~i~S~gtDk~v 114 (338)
T KOG0265|consen 42 LLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDC------ENFWVLKGHSGAVMELHGMRD-GSHILSCGTDKTV 114 (338)
T ss_pred hcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccc------cceeeeccccceeEeeeeccC-CCEEEEecCCceE
Confidence 366999999999999999999999999999999976522 222344589999999999998 9999999999999
Q ss_pred EEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEE
Q 001366 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGS 933 (1092)
Q Consensus 854 ~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs 933 (1092)
+.||+++|++++.+++|.+-|+++.-+.....++.||+.|+++++||+++..+++++.....++++.|.-.+. -+.+|+
T Consensus 115 ~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~-qv~sgg 193 (338)
T KOG0265|consen 115 RGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSD-QVISGG 193 (338)
T ss_pred EEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEeccccc-ceeecc
Confidence 9999999999999999999999999666567889999999999999999999999999999999999998886 788999
Q ss_pred CCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCC--C--
Q 001366 934 ADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTN--E-- 1008 (1092)
Q Consensus 934 ~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~--~-- 1008 (1092)
-|+.|++||+|... ...++.||..+|+.+..+ .+.++.+-+.|+++++||++..-+ ...|+..+.+|.. .
T Consensus 194 Idn~ikvWd~r~~d-~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p----~~R~v~if~g~~hnfekn 268 (338)
T KOG0265|consen 194 IDNDIKVWDLRKND-GLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAP----SQRCVKIFQGHIHNFEKN 268 (338)
T ss_pred ccCceeeeccccCc-ceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCC----CCceEEEeecchhhhhhh
Confidence 99999999999875 468999999999999998 788999999999999999995432 4567888877543 2
Q ss_pred eEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEE
Q 001366 1009 KNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKV 1088 (1092)
Q Consensus 1009 V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~v 1088 (1092)
...++|+|++.++.+|+.|..+++||......+.. ..+|.+.|+.+.|+|...+|.++++|.+|.+
T Consensus 269 lL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyk--------------lpGh~gsvn~~~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 269 LLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYK--------------LPGHYGSVNEVDFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred cceeeccCCCCccccccccceEEEeecccccEEEE--------------cCCcceeEEEeeecCCCcEEEEeccCceeEe
Confidence 34578999999999999999999999877665553 3688999999999999999999999999986
Q ss_pred EE
Q 001366 1089 LQ 1090 (1092)
Q Consensus 1089 W~ 1090 (1092)
=+
T Consensus 335 ge 336 (338)
T KOG0265|consen 335 GE 336 (338)
T ss_pred ec
Confidence 43
No 13
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=8.7e-37 Score=324.31 Aligned_cols=269 Identities=17% Similarity=0.160 Sum_probs=213.1
Q ss_pred CCchhHHHhhhcc--ccceeeeCCCCCccccccccccc-cccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCC
Q 001366 209 SGFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDT-KAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNG 285 (1092)
Q Consensus 209 ~~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (1092)
....+|...+... -.|+||||.. +-+.+.+|. +++.......-.-...|++.++.+.+||||+.+.+..+...
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakd----k~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~ 148 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKD----KKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN 148 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEecc----CCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc
Confidence 3667888766654 4799999998 444455555 55555555555667889999999999999999988877433
Q ss_pred CCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC
Q 001366 286 SLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS 365 (1092)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~ 365 (1092)
.-. +| .+|+||+. +|+.+|..-...+...++..++.|+|+||.|||.++|+||||||+|+|+...
T Consensus 149 ~d~---------iy-----~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~ 213 (419)
T KOG0663|consen 149 MDK---------IY-----IVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHK 213 (419)
T ss_pred cce---------ee-----eeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccC
Confidence 222 22 37999986 8999998877788888999999999999999999999999999999999999
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
|.+|++|||+||.+.++
T Consensus 214 G~lKiaDFGLAR~ygsp--------------------------------------------------------------- 230 (419)
T KOG0663|consen 214 GILKIADFGLAREYGSP--------------------------------------------------------------- 230 (419)
T ss_pred CcEEecccchhhhhcCC---------------------------------------------------------------
Confidence 99999999999987632
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~e 524 (1092)
...+|..+-|.||+|||+|.| ..|+.++|+||+|||+.|
T Consensus 231 ----------------------------------------~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE 270 (419)
T KOG0663|consen 231 ----------------------------------------LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAE 270 (419)
T ss_pred ----------------------------------------cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHH
Confidence 234567889999999999999 569999999999999999
Q ss_pred HcCC---CCcHHHHHHHHHhcccc------CCC----------------------CCCCC--CChhHHHHHHhccccCCC
Q 001366 525 LFGR---FDSERALAAAMSDLRDR------ILP----------------------PSFLS--ENPKEAGFCLWQLHPEPL 571 (1092)
Q Consensus 525 ll~~---f~~~~~~~~~~~~~~~~------~~p----------------------~~~~~--~~~~~~~li~~lL~~dP~ 571 (1092)
|+.+ |++..+..+...+.+.- +.| ..|.. .+....+|+..+|.+||.
T Consensus 271 ~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~ 350 (419)
T KOG0663|consen 271 LLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPG 350 (419)
T ss_pred HHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCcc
Confidence 9985 88877777665544321 111 11222 336678999999999999
Q ss_pred CCCCHHHHhhhhhhhhhhccchHhhhcc
Q 001366 572 SRPTTREILQSEVTNEFQEVCAEELLSS 599 (1092)
Q Consensus 572 ~Rpsa~eiL~~~~~~~~~~~~~~~~~~~ 599 (1092)
+|.||.|.|+|+||.+.+.+...+..+-
T Consensus 351 kR~tA~~~L~h~~F~e~P~p~~P~~~Pt 378 (419)
T KOG0663|consen 351 KRITAEDGLKHEYFRETPLPIDPSMFPT 378 (419)
T ss_pred ccccHHHhhcccccccCCCCCChhhcCC
Confidence 9999999999999999877766444433
No 14
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-37 Score=338.01 Aligned_cols=253 Identities=18% Similarity=0.223 Sum_probs=202.8
Q ss_pred hHHHhhhcc-c-cceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCC-CCCCCccccceecCC-CCC
Q 001366 213 EFFVKTTLK-G-KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNA-SPKPVGVGTAVVSNG-SLD 288 (1092)
Q Consensus 213 ~~~~~~~~~-g-~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~ 288 (1092)
.|.+++.+| | .|-||+|.. .+.++.+|+|-.-..--.-......|+++-|++.+ ||||+.+.+...-+. .++
T Consensus 11 RY~~i~klGDGTfGsV~la~~----~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 11 RYTVIRKLGDGTFGSVYLAKS----KETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHhcCCcceeEEEeee----cCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 488888887 3 799999998 45567777733222222245566778888777777 999999888766544 233
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
.+|||+ ..+|.++++.+++.+++..++.|+.||+.||+|+|.+|+.||||||+|||+.....|
T Consensus 87 ----------------fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~i 149 (538)
T KOG0661|consen 87 ----------------FVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVI 149 (538)
T ss_pred ----------------eeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEeccccee
Confidence 156655 579999999999999999999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+||....
T Consensus 150 KiaDFGLARev~S------------------------------------------------------------------- 162 (538)
T KOG0661|consen 150 KIADFGLAREVRS------------------------------------------------------------------- 162 (538)
T ss_pred Eeccccccccccc-------------------------------------------------------------------
Confidence 9999999998651
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~ 527 (1092)
...+|.++-|+||+|||+|.. +.|+.++||||+|||++|+.+
T Consensus 163 -------------------------------------kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~s 205 (538)
T KOG0661|consen 163 -------------------------------------KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYS 205 (538)
T ss_pred -------------------------------------CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHH
Confidence 223557889999999999876 779999999999999999986
Q ss_pred --C-CCcHHHHHHHHHhcccc--------------------CCC--------CCCCCCChhHHHHHHhccccCCCCCCCH
Q 001366 528 --R-FDSERALAAAMSDLRDR--------------------ILP--------PSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (1092)
Q Consensus 528 --~-f~~~~~~~~~~~~~~~~--------------------~~p--------~~~~~~~~~~~~li~~lL~~dP~~Rpsa 576 (1092)
+ |++..+..++++....- .+| ..++..++++..++..||.+||.+||||
T Consensus 206 LrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA 285 (538)
T KOG0661|consen 206 LRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTA 285 (538)
T ss_pred hcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccH
Confidence 3 88888887776654321 111 1134567889999999999999999999
Q ss_pred HHHhhhhhhhhhhc
Q 001366 577 REILQSEVTNEFQE 590 (1092)
Q Consensus 577 ~eiL~~~~~~~~~~ 590 (1092)
.++|+||||.....
T Consensus 286 ~~al~~pffq~~~~ 299 (538)
T KOG0661|consen 286 SQALQHPFFQVGRA 299 (538)
T ss_pred HHHhcCcccccccc
Confidence 99999999987543
No 15
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-36 Score=313.13 Aligned_cols=244 Identities=16% Similarity=0.141 Sum_probs=187.6
Q ss_pred CchhHHHhhhcc--ccceeeeCCCCCccccccccccc-cccccccCchh-hHhhhhhhhhhccCCCCCCCccccceecCC
Q 001366 210 GFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDT-KAFVTTTMPSD-AALKAAGAMMVASNASPKPVGVGTAVVSNG 285 (1092)
Q Consensus 210 ~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (1092)
.-+.|.|.+..+ .+|.|||.... .. +..++- +|..+. ++.. -..-+++..+|+.++||||+..+.-...+.
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~---~~-g~l~a~K~i~f~~-md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~ 91 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCL---LD-GKLVALKKIQFGM-MDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIED 91 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeec---cC-cchhhhhhcchhh-ccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhcc
Confidence 345677766655 47999999862 22 333333 444221 2222 233567888999999999997555222111
Q ss_pred CCCCCccCCCCCccccCCCcccccCCCCCHHHHHh---hcCCCCCHHHHHHHHHHHHHHHHHhhh--cC--ccccCCCCC
Q 001366 286 SLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLN---ARGHKGKRIECLYIFRQIVALVDYHHT--QG--VTFLDLKPS 358 (1092)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~---~~~~~~~~~~~~~i~~qil~~l~~lHs--~g--IvHrDLKP~ 358 (1092)
+. + -+++||+|++|+|...|+ +.++.+++.+++.+|.|++.||..||+ .. |+||||||.
T Consensus 92 ~e-------v-------lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPa 157 (375)
T KOG0591|consen 92 NE-------V-------LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPA 157 (375)
T ss_pred ch-------h-------hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcch
Confidence 11 1 134899999999999994 456778888999999999999999999 45 999999999
Q ss_pred CeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcc
Q 001366 359 SFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKI 438 (1092)
Q Consensus 359 Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1092)
||+|+.+|.||+.|||++|.+...
T Consensus 158 NIFl~~~gvvKLGDfGL~r~l~s~-------------------------------------------------------- 181 (375)
T KOG0591|consen 158 NIFLTANGVVKLGDFGLGRFLSSK-------------------------------------------------------- 181 (375)
T ss_pred heEEcCCCceeeccchhHhHhcch--------------------------------------------------------
Confidence 999999999999999999986511
Q ss_pred cccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhh
Q 001366 439 ETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSL 518 (1092)
Q Consensus 439 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSL 518 (1092)
.+...+.+|||.|||||.+.+.+|+++||||||
T Consensus 182 -----------------------------------------------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWsl 214 (375)
T KOG0591|consen 182 -----------------------------------------------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSL 214 (375)
T ss_pred -----------------------------------------------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHH
Confidence 011237899999999999999999999999999
Q ss_pred hHHHHHHcC---CCCcHHHHHHHHHhccccCCCCCC-CCCChhHHHHHHhccccCCCCCCCH
Q 001366 519 GVLFFELFG---RFDSERALAAAMSDLRDRILPPSF-LSENPKEAGFCLWQLHPEPLSRPTT 576 (1092)
Q Consensus 519 Gvll~ell~---~f~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~li~~lL~~dP~~Rpsa 576 (1092)
||++|||+. ||.+. ....+...+.+...||.+ .-.+.++..++..|+..||..||++
T Consensus 215 GCllyEMcaL~~PF~g~-n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 215 GCLLYEMCALQSPFYGD-NLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred HHHHHHHHhcCCCcccc-cHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 999999984 68877 566666777777777666 4567889999999999999999998
No 16
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=1.2e-33 Score=293.69 Aligned_cols=284 Identities=15% Similarity=0.217 Sum_probs=246.2
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.|++|.+.|.++.|++|.++|++++.||++.|||.-+.. ......-....|..++|+|. ++++|+|+.|+..
T Consensus 50 ~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~Ttn-------K~haipl~s~WVMtCA~sPS-g~~VAcGGLdN~C 121 (343)
T KOG0286|consen 50 TLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTN-------KVHAIPLPSSWVMTCAYSPS-GNFVACGGLDNKC 121 (343)
T ss_pred EecccccceeeeEecCCcCeEEeeccCCeEEEEEccccc-------ceeEEecCceeEEEEEECCC-CCeEEecCcCcee
Confidence 577999999999999999999999999999999976521 11122234688999999998 9999999999999
Q ss_pred EEEECCCC------ceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCC
Q 001366 854 KLWDACTG------QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSS 926 (1092)
Q Consensus 854 ~IWD~~tg------~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~ 926 (1092)
.||++.+. +..+.+.+|++-+.|+.|.. ..+|+|+|.|.+..+||+++++.+..|. |.+.|.+++++|...
T Consensus 122 siy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d--D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ 199 (343)
T KOG0286|consen 122 SIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD--DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDG 199 (343)
T ss_pred EEEecccccccccceeeeeecCccceeEEEEEcC--CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCC
Confidence 99999855 35667899999999999986 4679999999999999999999999998 678999999999555
Q ss_pred eEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEc--
Q 001366 927 HLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFS-- 1003 (1092)
Q Consensus 927 ~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~-- 1003 (1092)
+.|++|+.|+..++||+|.+. .+.++.+|...|.+|+|. ++.-+++||.|+++++||++. ...+..+.
T Consensus 200 ntFvSg~cD~~aklWD~R~~~-c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRa--------D~~~a~ys~~ 270 (343)
T KOG0286|consen 200 NTFVSGGCDKSAKLWDVRSGQ-CVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRA--------DQELAVYSHD 270 (343)
T ss_pred CeEEecccccceeeeeccCcc-eeEeecccccccceEEEccCCCeeeecCCCceeEEEeecC--------CcEEeeeccC
Confidence 799999999999999999985 578899999999999999 555699999999999999994 33344443
Q ss_pred CCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecC
Q 001366 1004 GHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSS 1083 (1092)
Q Consensus 1004 ~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~D 1083 (1092)
.-..+|++|+||..|++|.+|..|.++.+||.-.++.+.. +.+|...|+++..+|||..|+||+.|
T Consensus 271 ~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~--------------L~GHeNRvScl~~s~DG~av~TgSWD 336 (343)
T KOG0286|consen 271 SIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGV--------------LAGHENRVSCLGVSPDGMAVATGSWD 336 (343)
T ss_pred cccCCceeEEEcccccEEEeeecCCceeEeeccccceEEE--------------eeccCCeeEEEEECCCCcEEEecchh
Confidence 2345789999999999999999999999999877665543 35889999999999999999999999
Q ss_pred CeEEEEE
Q 001366 1084 GCIKVLQ 1090 (1092)
Q Consensus 1084 G~V~vW~ 1090 (1092)
..+|||.
T Consensus 337 s~lriW~ 343 (343)
T KOG0286|consen 337 STLRIWA 343 (343)
T ss_pred HheeecC
Confidence 9999994
No 17
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=1.5e-35 Score=319.40 Aligned_cols=279 Identities=18% Similarity=0.326 Sum_probs=246.1
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEC
Q 001366 779 ANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDA 858 (1092)
Q Consensus 779 ~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~ 858 (1092)
..+|..|.|.|+|+.|++|+..|.+.+|+... .....+...|+++|.++.|+++ +.+++||+.+|.|++|+.
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~-------fnFEtilQaHDs~Vr~m~ws~~-g~wmiSgD~gG~iKyWqp 167 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTS-------FNFETILQAHDSPVRTMKWSHN-GTWMISGDKGGMIKYWQP 167 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccEEEecCce-------eeHHHHhhhhcccceeEEEccC-CCEEEEcCCCceEEeccc
Confidence 45899999999999999999999999999753 3344556779999999999998 999999999999999997
Q ss_pred CCCceEEEeecc-CccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCC
Q 001366 859 CTGQTVSHYIEH-EKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADY 936 (1092)
Q Consensus 859 ~tg~~i~~l~~h-~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg 936 (1092)
.-. .++.+.+| ...|.+++|+| +...|+|||+||+|+|||....+.-..+. |.-.|.|++|+|..+ ++++|+.|.
T Consensus 168 nmn-nVk~~~ahh~eaIRdlafSp-nDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kg-LiasgskDn 244 (464)
T KOG0284|consen 168 NMN-NVKIIQAHHAEAIRDLAFSP-NDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKG-LIASGSKDN 244 (464)
T ss_pred chh-hhHHhhHhhhhhhheeccCC-CCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccc-eeEEccCCc
Confidence 544 34444444 58999999999 77889999999999999999888877777 567899999999986 999999999
Q ss_pred eEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEe
Q 001366 937 RTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLS 1015 (1092)
Q Consensus 937 ~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s 1015 (1092)
.|++||.|++.+ +.++.+|+..|..+.|. ++++|+|+|.|..++++|++ ..+.+.++.+|...|++++|+
T Consensus 245 lVKlWDprSg~c-l~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR--------~mkEl~~~r~Hkkdv~~~~Wh 315 (464)
T KOG0284|consen 245 LVKLWDPRSGSC-LATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIR--------TMKELFTYRGHKKDVTSLTWH 315 (464)
T ss_pred eeEeecCCCcch-hhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehh--------HhHHHHHhhcchhhheeeccc
Confidence 999999999874 68889999999999999 77899999999999999999 456688999999999999999
Q ss_pred cC-CCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1016 TA-DGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1016 pd-g~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
|- ..+|++|+.||.|..|.+...+++..+. ..|...|++++|+|-|.+|++|+.|.++++|.
T Consensus 316 P~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~-------------~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 316 PLNESLFTSGGSDGSVVHWVVGLEEPLGEIP-------------PAHDGEIWSLAYHPLGHILATGSNDRTVRFWT 378 (464)
T ss_pred cccccceeeccCCCceEEEeccccccccCCC-------------cccccceeeeeccccceeEeecCCCcceeeec
Confidence 95 5689999999999999987666665443 57889999999999999999999999999994
No 18
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.1e-36 Score=333.00 Aligned_cols=255 Identities=20% Similarity=0.208 Sum_probs=202.5
Q ss_pred ccceeeeCCCCCccccccccccc-cccccccCchhhHhhhhhhhhhccCCCCCCCccccceecC--CCCCCCccCCCCCc
Q 001366 222 GKGIVCRGPPLNAFKERRGMIDT-KAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSN--GSLDLGARTGVPAS 298 (1092)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 298 (1092)
=.|-|||+.. ..++..+|. ||........-...++|++++|++..||||+++....... +..++
T Consensus 129 Tyg~VYkAr~----~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl--------- 195 (560)
T KOG0600|consen 129 TYGQVYKARD----LETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL--------- 195 (560)
T ss_pred chhheeEeee----cccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE---------
Confidence 4799999998 345666666 4444443455567899999999999999999988887765 23331
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
+.||++. +|.-++...+-+++..++.+||+||++||+|||++||+|||||.+||||+.+|.+||+|||||+.
T Consensus 196 -------VFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~ 267 (560)
T KOG0600|consen 196 -------VFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARF 267 (560)
T ss_pred -------EEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceee
Confidence 5666654 88889988888999999999999999999999999999999999999999999999999999987
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+...
T Consensus 268 y~~~---------------------------------------------------------------------------- 271 (560)
T KOG0600|consen 268 YTPS---------------------------------------------------------------------------- 271 (560)
T ss_pred ccCC----------------------------------------------------------------------------
Confidence 5410
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
....+|..+-|.||+|||+|.| ..|+.++|+||+||||.||+.+ |.+..+
T Consensus 272 --------------------------~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE 325 (560)
T KOG0600|consen 272 --------------------------GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTE 325 (560)
T ss_pred --------------------------CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccH
Confidence 0122568899999999999999 6699999999999999999986 777777
Q ss_pred HHHHHHhcccc-----------CCC----------------CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 535 LAAAMSDLRDR-----------ILP----------------PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 535 ~~~~~~~~~~~-----------~~p----------------~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
..++..+.+-. .+| ..|...++...+||..||..||.+|.||.++|+|+||..
T Consensus 326 veQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t 405 (560)
T KOG0600|consen 326 VEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT 405 (560)
T ss_pred HHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence 77765544321 111 013445677889999999999999999999999999977
Q ss_pred hhccchHhhhcc
Q 001366 588 FQEVCAEELLSS 599 (1092)
Q Consensus 588 ~~~~~~~~~~~~ 599 (1092)
.+..+....++.
T Consensus 406 ~p~~~~p~~Lp~ 417 (560)
T KOG0600|consen 406 EPLPCDPSSLPK 417 (560)
T ss_pred CCCCCCcccCCC
Confidence 666555433333
No 19
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-36 Score=323.58 Aligned_cols=258 Identities=18% Similarity=0.191 Sum_probs=199.0
Q ss_pred ccccceeeeCCCCCccccccccccc-cccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDT-KAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.+..|+||++.. +..++.+|. ||.-.-.......+..++.++++..+|+||+.+.+....... . ....+
T Consensus 32 ~GAyGvVcsA~~----~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~-~--~f~Dv--- 101 (359)
T KOG0660|consen 32 RGAYGVVCSAKD----KRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR-D--KFNDV--- 101 (359)
T ss_pred CcceeeEEEEEE----cCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc-c--cccee---
Confidence 345799999887 344566666 444344567788999999999999999999987666443110 0 11111
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+++|++ +.+|...|+... .++...+..++.|||.||.|+|+.+|+||||||+|+|++.++.+|++|||+||.
T Consensus 102 -----YiV~elM-etDL~~iik~~~-~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~ 174 (359)
T KOG0660|consen 102 -----YLVFELM-ETDLHQIIKSQQ-DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARY 174 (359)
T ss_pred -----EEehhHH-hhHHHHHHHcCc-cccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceee
Confidence 2245554 889999998764 377779999999999999999999999999999999999999999999999998
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+...
T Consensus 175 ~~~~---------------------------------------------------------------------------- 178 (359)
T KOG0660|consen 175 LDKF---------------------------------------------------------------------------- 178 (359)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 6510
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
.....+|..+.|+||+|||++.. ..||.++||||+||||.|||++ |++.+.
T Consensus 179 -------------------------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~ 233 (359)
T KOG0660|consen 179 -------------------------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDY 233 (359)
T ss_pred -------------------------CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCch
Confidence 01234568899999999999876 7799999999999999999986 777655
Q ss_pred HHHHHHhcccc------------------------C-----CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 535 LAAAMSDLRDR------------------------I-----LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 535 ~~~~~~~~~~~------------------------~-----~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
..+....+..- . +...|+..+|...+|+.+||..||.+|+|++|+|+|||+
T Consensus 234 v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl 313 (359)
T KOG0660|consen 234 VHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYL 313 (359)
T ss_pred HHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhh
Confidence 44442222110 1 112367788999999999999999999999999999999
Q ss_pred hhhhccchHh
Q 001366 586 NEFQEVCAEE 595 (1092)
Q Consensus 586 ~~~~~~~~~~ 595 (1092)
....++..+.
T Consensus 314 ~~~hdp~dEP 323 (359)
T KOG0660|consen 314 APYHDPEDEP 323 (359)
T ss_pred hhhcCCccCC
Confidence 9887777644
No 20
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=1.3e-32 Score=301.28 Aligned_cols=315 Identities=23% Similarity=0.307 Sum_probs=265.9
Q ss_pred ccCCCCc-E--EeEcCCeEEEEEccc-c---eEEeeEEeee-e----cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 001366 741 IQNPTDR-L--GAFFDGLCKYARYSK-F---EVQGMLRTGE-F----NNSANVICSISFDRDEDHFAAAGVSKKIKIFEF 808 (1092)
Q Consensus 741 ~~~~~~~-l--~~~~D~~~k~w~~~~-~---~~~~~l~~~~-l----~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~ 808 (1092)
.|+|-.. + +...|.+.++|++.. . .....+++.. + ......|++++|+.+|..||+|+.||.++||+.
T Consensus 185 ~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~ 264 (524)
T KOG0273|consen 185 AWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSEDGEARIWNK 264 (524)
T ss_pred ecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeecCcEEEEEec
Confidence 4667443 3 445777889998753 1 1111122110 1 123468999999999999999999999999998
Q ss_pred CCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEE
Q 001366 809 NALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLA 888 (1092)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~la 888 (1092)
.. ......-.|+++|.++.|+.. +++|++++.||++.|||..+|.....|.-|..+..+|.|-. ..-|+
T Consensus 265 ~G--------~l~~tl~~HkgPI~slKWnk~-G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~--~~~F~ 333 (524)
T KOG0273|consen 265 DG--------NLISTLGQHKGPIFSLKWNKK-GTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQS--NDEFA 333 (524)
T ss_pred Cc--------hhhhhhhccCCceEEEEEcCC-CCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEec--CceEe
Confidence 75 222334468999999999998 99999999999999999999999999999999878999985 46799
Q ss_pred EEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC
Q 001366 889 SGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD 967 (1092)
Q Consensus 889 Sgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~ 967 (1092)
+++.|+.|+|+-+....++.++. |++.|.++.|+|.+. +|++++.|++++||...... ....+.+|.+.|..+.|+|
T Consensus 334 ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~-LLaS~SdD~TlkiWs~~~~~-~~~~l~~Hskei~t~~wsp 411 (524)
T KOG0273|consen 334 TSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGS-LLASCSDDGTLKIWSMGQSN-SVHDLQAHSKEIYTIKWSP 411 (524)
T ss_pred ecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCc-eEEEecCCCeeEeeecCCCc-chhhhhhhccceeeEeecC
Confidence 99999999999999999998887 678999999999995 99999999999999987654 3567889999999999973
Q ss_pred C----------CEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCC
Q 001366 968 S----------GTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSL 1037 (1092)
Q Consensus 968 ~----------~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~ 1037 (1092)
. ..+++++.|++|++||+. .+.++.+|..|+.+|++++|+|+|+|+|+|+.||.|.||++.+
T Consensus 412 ~g~v~~n~~~~~~l~sas~dstV~lwdv~--------~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~ 483 (524)
T KOG0273|consen 412 TGPVTSNPNMNLMLASASFDSTVKLWDVE--------SGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKT 483 (524)
T ss_pred CCCccCCCcCCceEEEeecCCeEEEEEcc--------CCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccc
Confidence 2 258999999999999998 5788999999999999999999999999999999999999999
Q ss_pred CCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1038 PMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1038 ~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
++.+....- +..|..+||+.+|..|+++-+||.++|.++
T Consensus 484 ~~l~~s~~~---------------~~~Ifel~Wn~~G~kl~~~~sd~~vcvldl 522 (524)
T KOG0273|consen 484 GKLVKSYQG---------------TGGIFELCWNAAGDKLGACASDGSVCVLDL 522 (524)
T ss_pred hheeEeecC---------------CCeEEEEEEcCCCCEEEEEecCCCceEEEe
Confidence 988877642 455999999999999999999999999886
No 21
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-32 Score=283.62 Aligned_cols=301 Identities=15% Similarity=0.151 Sum_probs=242.3
Q ss_pred chhhhccchhhhhhccccccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCc
Q 001366 723 NDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKK 802 (1092)
Q Consensus 723 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~ 802 (1092)
..++++|.+++.+++.... .++..++++.|.++.+|.+..-+.........|.+|+..|..+..++||++.++++.|++
T Consensus 8 ~~tl~gh~d~Vt~la~~~~-~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~ 86 (315)
T KOG0279|consen 8 RGTLEGHTDWVTALAIKIK-NSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGT 86 (315)
T ss_pred eeeecCCCceEEEEEeecC-CCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccce
Confidence 3568889999888766433 677788999999999999865444333334468899999999999999999999999999
Q ss_pred EEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeecc--CccEEEEEEe
Q 001366 803 IKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEH--EKRAWSVDFS 880 (1092)
Q Consensus 803 I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h--~~~V~sv~fs 880 (1092)
+++||+.+ ......+.+|...|.+++|+++ ...++|||.|.+|++|++.. .+..+...+ .+.|.||.|+
T Consensus 87 lrlWDl~~-------g~~t~~f~GH~~dVlsva~s~d-n~qivSGSrDkTiklwnt~g-~ck~t~~~~~~~~WVscvrfs 157 (315)
T KOG0279|consen 87 LRLWDLAT-------GESTRRFVGHTKDVLSVAFSTD-NRQIVSGSRDKTIKLWNTLG-VCKYTIHEDSHREWVSCVRFS 157 (315)
T ss_pred EEEEEecC-------CcEEEEEEecCCceEEEEecCC-CceeecCCCcceeeeeeecc-cEEEEEecCCCcCcEEEEEEc
Confidence 99999976 2334456789999999999998 88999999999999999854 454454433 7889999999
Q ss_pred cCC-CCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCC
Q 001366 881 QVH-PTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEK 958 (1092)
Q Consensus 881 p~~-~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~ 958 (1092)
|.. .-.|+++|.|++||+||+++-+....+. |...++.++++|||. ++++|+.||.+.+||++.++. +.+ .+|..
T Consensus 158 P~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGs-lcasGgkdg~~~LwdL~~~k~-lys-l~a~~ 234 (315)
T KOG0279|consen 158 PNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGS-LCASGGKDGEAMLWDLNEGKN-LYS-LEAFD 234 (315)
T ss_pred CCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCC-EEecCCCCceEEEEEccCCce-eEe-ccCCC
Confidence 953 5689999999999999999988777766 677899999999996 999999999999999998876 333 46889
Q ss_pred CeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeE-EEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCC
Q 001366 959 AVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSL-TFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRS 1036 (1092)
Q Consensus 959 ~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~-~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~ 1036 (1092)
.|.+++|+|+.+.+++..+..|+|||+............... ..........+++|+++|..|.+|-.|+.|++|.+.
T Consensus 235 ~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 235 IVNSLCFSPNRYWLCAATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred eEeeEEecCCceeEeeccCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 999999999999888888999999999854322111111110 111223345678999999999999999999999753
No 22
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=332.03 Aligned_cols=253 Identities=20% Similarity=0.229 Sum_probs=192.8
Q ss_pred CchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccc----cCchhhHhhhhhhhhhccCC-CCCCCcccccee
Q 001366 210 GFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTT----TMPSDAALKAAGAMMVASNA-SPKPVGVGTAVV 282 (1092)
Q Consensus 210 ~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 282 (1092)
....|.+.++++ ..|.||.|... ..++.++.|+.--. ..........++...++..+ ||||+.+.+...
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~----~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~ 90 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHR----LTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA 90 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeec----cCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe
Confidence 344677777776 47999999762 22455666542111 11112233446777888888 999998777655
Q ss_pred cCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE
Q 001366 283 SNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL 362 (1092)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill 362 (1092)
...-.+ .+||||.||+|.++|...++ +.+.+++.+|+||++||+|||++||+||||||+|||+
T Consensus 91 t~~~~~----------------ivmEy~~gGdL~~~i~~~g~-l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENill 153 (370)
T KOG0583|consen 91 TPTKIY----------------IVMEYCSGGDLFDYIVNKGR-LKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILL 153 (370)
T ss_pred cCCeEE----------------EEEEecCCccHHHHHHHcCC-CChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEe
Confidence 433333 38999999999999988554 5557999999999999999999999999999999999
Q ss_pred ccC-CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 363 LQS-NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 363 ~~~-~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
+.+ +++||+|||++.....
T Consensus 154 d~~~~~~Kl~DFG~s~~~~~------------------------------------------------------------ 173 (370)
T KOG0583|consen 154 DGNEGNLKLSDFGLSAISPG------------------------------------------------------------ 173 (370)
T ss_pred cCCCCCEEEeccccccccCC------------------------------------------------------------
Confidence 999 9999999999876420
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC-C-Cccccchhhh
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-C-TTSSNIYSLG 519 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~-t~~sDIwSLG 519 (1092)
+...+.+.+||+.|+|||++.+.. | +.++||||+|
T Consensus 174 -------------------------------------------~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~G 210 (370)
T KOG0583|consen 174 -------------------------------------------EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLG 210 (370)
T ss_pred -------------------------------------------CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhH
Confidence 011234789999999999999966 7 5899999999
Q ss_pred HHHHHHcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 520 VLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 520 vll~ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
|+||.|++| |.............+....-|.... ++++..|+.+||.+||..|+++.+|+.||||..
T Consensus 211 ViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 211 VILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL-SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC-CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 999999997 5544333333444444333344333 999999999999999999999999999999987
No 23
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=6.2e-33 Score=295.79 Aligned_cols=284 Identities=21% Similarity=0.295 Sum_probs=256.0
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.+.+|..+|+.+-|+|+-..+++++.|.+|++||+.+. .......+|...|.+|+|+.. +.+||+||.|-.+
T Consensus 103 ~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg-------~~e~~LrGHt~sv~di~~~a~-Gk~l~tcSsDl~~ 174 (406)
T KOG0295|consen 103 KLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETG-------ELERSLRGHTDSVFDISFDAS-GKYLATCSSDLSA 174 (406)
T ss_pred hhhccccceeeeeeccCceEEEEecCCceEEEEEccch-------hhhhhhhccccceeEEEEecC-ccEEEecCCccch
Confidence 35689999999999999999999999999999998762 234456789999999999998 8999999999999
Q ss_pred EEEECCC-CceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEE
Q 001366 854 KLWDACT-GQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAF 931 (1092)
Q Consensus 854 ~IWD~~t-g~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~lat 931 (1092)
++||..+ .++++.+.+|...|.++.|-| .+.+++|++.|.+|+.|++.++.|+.++. |...|..++.+.||. ++|+
T Consensus 175 ~LWd~~~~~~c~ks~~gh~h~vS~V~f~P-~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGt-i~As 252 (406)
T KOG0295|consen 175 KLWDFDTFFRCIKSLIGHEHGVSSVFFLP-LGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGT-IIAS 252 (406)
T ss_pred hheeHHHHHHHHHHhcCcccceeeEEEEe-cCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCee-EEEe
Confidence 9999987 468888899999999999999 78999999999999999999999999998 566899999999994 9999
Q ss_pred EECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC-----------C-----CEEEEEECCCeEEEEEcCCCCCCCCCC
Q 001366 932 GSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD-----------S-----GTLVTASTDNKLKLWDLKRTSHTGPST 995 (1092)
Q Consensus 932 gs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~-----------~-----~~L~Sgs~Dg~I~vWDl~~~~~~~~~~ 995 (1092)
++.|.+|++|-+.+.. ....+..|..+|-+++|.+ + .+++++|.|++|++||+. +
T Consensus 253 ~s~dqtl~vW~~~t~~-~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~--------t 323 (406)
T KOG0295|consen 253 CSNDQTLRVWVVATKQ-CKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVS--------T 323 (406)
T ss_pred cCCCceEEEEEeccch-hhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEecc--------C
Confidence 9999999999998764 3456789999999999931 1 379999999999999999 6
Q ss_pred CceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCC
Q 001366 996 NACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSD 1075 (1092)
Q Consensus 996 ~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~ 1075 (1092)
+.|+.++.+|.++|..++|+|.|+||+++.+|++++|||++..+++... ..|..+|+++.|+.+..
T Consensus 324 g~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~--------------~ah~hfvt~lDfh~~~p 389 (406)
T KOG0295|consen 324 GMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTL--------------EAHEHFVTSLDFHKTAP 389 (406)
T ss_pred CeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeecc--------------CCCcceeEEEecCCCCc
Confidence 7899999999999999999999999999999999999999988776543 46788999999999999
Q ss_pred EEEEEecCCeEEEEE
Q 001366 1076 MVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1076 ~Lasgs~DG~V~vW~ 1090 (1092)
+++||+.|..++||+
T Consensus 390 ~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 390 YVVTGSVDQTVKVWE 404 (406)
T ss_pred eEEeccccceeeeee
Confidence 999999999999997
No 24
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-34 Score=329.55 Aligned_cols=262 Identities=22% Similarity=0.248 Sum_probs=206.2
Q ss_pred ecccCCchhHHHhhhcc--ccceeeeCCCCCcccccccccccccccccc--CchhhHhhhhhhhhhccCCCCCCCccccc
Q 001366 205 MLSKSGFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTT--MPSDAALKAAGAMMVASNASPKPVGVGTA 280 (1092)
Q Consensus 205 ~~~~~~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (1092)
+.+..-..=+.+-+||+ +.|.|-.|.- .++|+.+|+||..... ..++...--++..+|+-..|||+..+++.
T Consensus 5 ~~~~~tiGpwkLgkTLG~Gstg~vrlakh----~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydV 80 (786)
T KOG0588|consen 5 MSHKNTIGPWKLGKTLGKGSTGCVRLAKH----AETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDV 80 (786)
T ss_pred ccccccccceeccccccCCCCceehhhhc----ccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeee
Confidence 45555555577777776 4677777776 6678999998876653 23334444555666777899999988777
Q ss_pred eecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCe
Q 001366 281 VVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSF 360 (1092)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Ni 360 (1092)
-.-+.-++ ++.||++||.|+++|-.+|..++. ++.++|+||+.||.|||..+|+||||||+|+
T Consensus 81 we~~~~ly----------------lvlEyv~gGELFdylv~kG~l~e~-eaa~ff~QIi~gv~yCH~~~icHRDLKpENl 143 (786)
T KOG0588|consen 81 WENKQHLY----------------LVLEYVPGGELFDYLVRKGPLPER-EAAHFFRQILDGVSYCHAFNICHRDLKPENL 143 (786)
T ss_pred eccCceEE----------------EEEEecCCchhHHHHHhhCCCCCH-HHHHHHHHHHHHHHHHhhhcceeccCCchhh
Confidence 55444444 389999999999999988876666 9999999999999999999999999999999
Q ss_pred EEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccc
Q 001366 361 KLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIET 440 (1092)
Q Consensus 361 ll~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1092)
||+..++|||+|||+|..-.
T Consensus 144 LLd~~~nIKIADFGMAsLe~------------------------------------------------------------ 163 (786)
T KOG0588|consen 144 LLDVKNNIKIADFGMASLEV------------------------------------------------------------ 163 (786)
T ss_pred hhhcccCEeeeccceeeccc------------------------------------------------------------
Confidence 99999999999999886522
Q ss_pred cCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC-Cccccchhhh
Q 001366 441 ANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIYSLG 519 (1092)
Q Consensus 441 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-t~~sDIwSLG 519 (1092)
+..-+.+.||+|.|+|||+++|.+| +.++||||.|
T Consensus 164 --------------------------------------------~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCG 199 (786)
T KOG0588|consen 164 --------------------------------------------PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCG 199 (786)
T ss_pred --------------------------------------------CCccccccCCCcccCCchhhcCCCCCCCccccchhH
Confidence 1122346799999999999999998 7899999999
Q ss_pred HHHHHHcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhccch
Q 001366 520 VLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCA 593 (1092)
Q Consensus 520 vll~ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~~~~ 593 (1092)
||||.||+| |+.++-...+.+..+...--|. ..++++.+||.+||..||+.|+|++||+.|||+.+......
T Consensus 200 VILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs--~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~ 274 (786)
T KOG0588|consen 200 VILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPS--NISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPS 274 (786)
T ss_pred HHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCC--cCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCCh
Confidence 999999996 8765555555544444332233 34899999999999999999999999999999987655443
No 25
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=6.8e-33 Score=321.50 Aligned_cols=292 Identities=19% Similarity=0.315 Sum_probs=241.5
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC------------------------CCCcccccceeeecCCCCeE
Q 001366 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALF------------------------NDSVDVYYPAVEMSNRSKLS 832 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~------------------------~~~~~~~~~~~~~~h~~~V~ 832 (1092)
+....++|+.|++|+.+||.|-.|..|++|.+.... .+...........+|.++|.
T Consensus 376 nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVy 455 (707)
T KOG0263|consen 376 NTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVY 455 (707)
T ss_pred EcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCcee
Confidence 445679999999999999999999999999987311 00111222334789999999
Q ss_pred EEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-
Q 001366 833 CVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK- 911 (1092)
Q Consensus 833 ~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~- 911 (1092)
.+.|+|+ .++|++||.|++||+|.+.+..++..++||..+||+|.|+| .|-+|||||.|++.++|.....++++.+.
T Consensus 456 g~sFsPd-~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P-~GyYFatas~D~tArLWs~d~~~PlRifag 533 (707)
T KOG0263|consen 456 GCSFSPD-RRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAP-RGYYFATASHDQTARLWSTDHNKPLRIFAG 533 (707)
T ss_pred eeeeccc-ccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecC-CceEEEecCCCceeeeeecccCCchhhhcc
Confidence 9999998 99999999999999999999999999999999999999999 89999999999999999999999998887
Q ss_pred cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCC
Q 001366 912 NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSH 990 (1092)
Q Consensus 912 ~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~ 990 (1092)
|-+.|.|++|+|+. +++++||.|.+|++||+.++.. +..+.||.++|.+|+|+ .+.+|++|+.||.|++||+.
T Consensus 534 hlsDV~cv~FHPNs-~Y~aTGSsD~tVRlWDv~~G~~-VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~---- 607 (707)
T KOG0263|consen 534 HLSDVDCVSFHPNS-NYVATGSSDRTVRLWDVSTGNS-VRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLA---- 607 (707)
T ss_pred cccccceEEECCcc-cccccCCCCceEEEEEcCCCcE-EEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcC----
Confidence 67899999999998 4999999999999999999864 78899999999999999 67799999999999999999
Q ss_pred CCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCce-eeeec----cccCCCC-----CccccCC
Q 001366 991 TGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPI-TSYKF----GSIDPIS-----GKETDDD 1060 (1092)
Q Consensus 991 ~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i-~~~~~----~~~~~i~-----~~~~~~~ 1060 (1092)
.+..+..+.+|++.|+++.||.+|..||+||.|++|++||+...... ...++ +...... .......
T Consensus 608 ----~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~~t 683 (707)
T KOG0263|consen 608 ----NGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIELLNLGHISTSNSAITQENNASSLLLGSFYT 683 (707)
T ss_pred ----CCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhcccccccccccccccccccCCCCcceeeeeee
Confidence 45678899999999999999999999999999999999997643322 00000 0000000 0011223
Q ss_pred CCCCEEEEEEeCCCCEEEEE
Q 001366 1061 NGLFVSSVCWRRRSDMVVAA 1080 (1092)
Q Consensus 1061 h~~~V~sva~spd~~~Lasg 1080 (1092)
...+|..|.|.-..-.|+.|
T Consensus 684 K~tpv~~l~FtrrNl~L~~g 703 (707)
T KOG0263|consen 684 KNTPVVGLHFTRRNLLLAVG 703 (707)
T ss_pred cCceEEEEEEeccceeEEec
Confidence 45588899998776555554
No 26
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-34 Score=328.51 Aligned_cols=239 Identities=18% Similarity=0.191 Sum_probs=192.3
Q ss_pred ccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
|+-.+|++.. ..+++.+|+||..-... ..+-.....++.+-+..+||||+.++.-.....+.++
T Consensus 30 gFA~cYe~~~----~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYi---------- 95 (592)
T KOG0575|consen 30 GFARCYEARD----LDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYI---------- 95 (592)
T ss_pred cceEEEEEEE----cCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEE----------
Confidence 5667888887 33578888877643322 2233445667778899999999998888777777774
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
+.|.|..++|.++++++ ..+++.+++.|++||+.||.|||++||+|||||-+||+|+.+.+|||+|||||..+
T Consensus 96 ------vLELC~~~sL~el~Krr-k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~l 168 (592)
T KOG0575|consen 96 ------VLELCHRGSLMELLKRR-KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQL 168 (592)
T ss_pred ------EEEecCCccHHHHHHhc-CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeee
Confidence 89999999999999955 46777799999999999999999999999999999999999999999999999876
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
..+.
T Consensus 169 e~~~---------------------------------------------------------------------------- 172 (592)
T KOG0575|consen 169 EYDG---------------------------------------------------------------------------- 172 (592)
T ss_pred cCcc----------------------------------------------------------------------------
Confidence 5110
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALA 536 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~ 536 (1092)
..-.+.||||-|.|||++.....++.+||||+|||||-||.| |....-..
T Consensus 173 ---------------------------Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke 225 (592)
T KOG0575|consen 173 ---------------------------ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE 225 (592)
T ss_pred ---------------------------cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH
Confidence 001278999999999999999999999999999999999986 55443333
Q ss_pred HHHHhcc-ccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 537 AAMSDLR-DRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 537 ~~~~~~~-~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
....... +...|. ..+++.++||..||.++|.+|||+.+||.|+||..
T Consensus 226 ty~~Ik~~~Y~~P~---~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 226 TYNKIKLNEYSMPS---HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKS 274 (592)
T ss_pred HHHHHHhcCccccc---ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhC
Confidence 3333333 233444 44899999999999999999999999999999944
No 27
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=315.71 Aligned_cols=254 Identities=12% Similarity=0.169 Sum_probs=195.4
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
+..|.+.+.++ .+||||+|... ..+.++++|-..... ...-.+...++.++|...+|||||.+++....+...
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~----~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i 84 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHK----KSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFI 84 (429)
T ss_pred cccceehhhccCcceEEEEEeEec----cCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeE
Confidence 34455555544 58999999973 334556654332221 222345567788899999999999988876655544
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC--
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-- 365 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~-- 365 (1092)
+ .+||||.||+|.+||++++ .+++..+++++.||+.||++||+++||||||||.||||+..
T Consensus 85 ~----------------lVMEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~ 147 (429)
T KOG0595|consen 85 Y----------------LVMEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTAR 147 (429)
T ss_pred E----------------EEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCC
Confidence 4 3899999999999998887 47777999999999999999999999999999999999865
Q ss_pred ----CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 366 ----NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 366 ----~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
-.+||+|||+||.+....
T Consensus 148 ~~~~~~LKIADFGfAR~L~~~~---------------------------------------------------------- 169 (429)
T KOG0595|consen 148 NDTSPVLKIADFGFARFLQPGS---------------------------------------------------------- 169 (429)
T ss_pred CCCCceEEecccchhhhCCchh----------------------------------------------------------
Confidence 358999999999866211
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHH
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVL 521 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvl 521 (1092)
...+.||++.|||||++....|+.|+|+||+|+|
T Consensus 170 ----------------------------------------------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~I 203 (429)
T KOG0595|consen 170 ----------------------------------------------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTI 203 (429)
T ss_pred ----------------------------------------------HHHHhhCCccccCHHHHHhccccchhhHHHHHHH
Confidence 1227899999999999999999999999999999
Q ss_pred HHHHcCC---CCcHHHHHHHHHhccccCCCCC-CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 522 FFELFGR---FDSERALAAAMSDLRDRILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 522 l~ell~~---f~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
||++++| |.............+.....|. ....++...+++..+|..+|.+|.+..+-+.|+++...+
T Consensus 204 lyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 204 LYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred HHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 9999986 5544444444433333333333 233456677999999999999999999999999987754
No 28
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=3.4e-32 Score=276.95 Aligned_cols=275 Identities=17% Similarity=0.212 Sum_probs=233.5
Q ss_pred CCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCc--eEEEee
Q 001366 791 EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ--TVSHYI 868 (1092)
Q Consensus 791 g~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~--~i~~l~ 868 (1092)
.-+||++|.|.+|++|...+ ..+.....-.++.|+.+...|+ +..||+++. ..||+||+++++ ++.+|.
T Consensus 10 ~viLvsA~YDhTIRfWqa~t-------G~C~rTiqh~dsqVNrLeiTpd-k~~LAaa~~-qhvRlyD~~S~np~Pv~t~e 80 (311)
T KOG0315|consen 10 PVILVSAGYDHTIRFWQALT-------GICSRTIQHPDSQVNRLEITPD-KKDLAAAGN-QHVRLYDLNSNNPNPVATFE 80 (311)
T ss_pred ceEEEeccCcceeeeeehhc-------CeEEEEEecCccceeeEEEcCC-cchhhhccC-CeeEEEEccCCCCCceeEEe
Confidence 35899999999999999765 2333344445788999999998 888888875 689999999875 689999
Q ss_pred ccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCc
Q 001366 869 EHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA 948 (1092)
Q Consensus 869 ~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~ 948 (1092)
+|++.|++|.|.. ++..++|||.||++||||++...+.+.+++.++|++|..+|+.. -|++|..+|.|++||+++...
T Consensus 81 ~h~kNVtaVgF~~-dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQt-eLis~dqsg~irvWDl~~~~c 158 (311)
T KOG0315|consen 81 GHTKNVTAVGFQC-DGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQT-ELISGDQSGNIRVWDLGENSC 158 (311)
T ss_pred ccCCceEEEEEee-cCeEEEecCCCceEEEEeccCcccchhccCCCCcceEEecCCcc-eEEeecCCCcEEEEEccCCcc
Confidence 9999999999999 99999999999999999999988888999999999999999985 788999999999999997643
Q ss_pred ceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecC
Q 001366 949 PWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSES 1027 (1092)
Q Consensus 949 ~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~D 1027 (1092)
...........|.++... ++..++.+...|.+.+|++-... ..+.-.++..+..|...+..+.+|||++|||++|.|
T Consensus 159 ~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~--~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssd 236 (311)
T KOG0315|consen 159 THELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQ--TASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSD 236 (311)
T ss_pred ccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCC--ccccceEhhheecccceEEEEEECCCCcEEEeecCC
Confidence 323334455788999887 77788899999999999998532 222345677889999999999999999999999999
Q ss_pred CcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1028 NEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1028 g~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.+++||+...- + ......++|...|+.++||.||.+|+||++|+.+++|++
T Consensus 237 ktv~iwn~~~~--~-----------kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~ 287 (311)
T KOG0315|consen 237 KTVKIWNTDDF--F-----------KLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDL 287 (311)
T ss_pred ceEEEEecCCc--e-----------eeEEEeecCCceEEeeeeccCccEEEecCCCCceeeccc
Confidence 99999987654 1 112345788899999999999999999999999999986
No 29
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3e-34 Score=322.38 Aligned_cols=262 Identities=16% Similarity=0.152 Sum_probs=192.0
Q ss_pred hHHHhhhcc--ccceeeeCCCCCcccccccccccccccccc----CchhhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTT----MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
.|.+.+-++ ..-.||++...+ .+.+.|.||..-.- .+..+..+-+ ..|...+.||-|++++.-..-+..
T Consensus 74 DF~Fg~~lGeGSYStV~~A~~~~----t~keYAiKVl~K~~Iike~KvkYV~~Ek-~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 74 DFKFGKILGEGSYSTVVLAREKA----TGKEYAIKVLDKRYIIKEKKVKYVTREK-EALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred hcchhheeccccceeEEEeeecC----CCceeeHhhhhHHHHHhhcccchhhHHH-HHHHHhhCCCCeEEEEEEeecccc
Confidence 344444444 356777777733 45566665542111 1222222222 234444599999987777666555
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
+|. +++|+++|+|.++|++.|. +++..+++++.||++||+|||++|||||||||+||||+.++
T Consensus 149 LYF----------------vLe~A~nGdll~~i~K~Gs-fde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dm 211 (604)
T KOG0592|consen 149 LYF----------------VLEYAPNGDLLDLIKKYGS-FDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDG 211 (604)
T ss_pred eEE----------------EEEecCCCcHHHHHHHhCc-chHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCC
Confidence 552 8999999999999998864 78879999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
++||+|||.|+.+........-.
T Consensus 212 hikITDFGsAK~l~~~~~~~~~~--------------------------------------------------------- 234 (604)
T KOG0592|consen 212 HIKITDFGSAKILSPSQKSQENP--------------------------------------------------------- 234 (604)
T ss_pred cEEEeeccccccCChhhccccCc---------------------------------------------------------
Confidence 99999999999877322110000
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
.+.+++ ...-++++||..|.+||+|.+...++.+|||+||||||.|+
T Consensus 235 -------------------~~~~~a--------------~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQml 281 (604)
T KOG0592|consen 235 -------------------VDPNQA--------------SSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQML 281 (604)
T ss_pred -------------------cCcccc--------------cCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHh
Confidence 000000 00124789999999999999999999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhcc-ccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLR-DRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
.| |....+.....+++. ...+|+.| ++...+|+.++|..||++|+|+.+|.+||||.+..
T Consensus 282 aG~PPFra~NeyliFqkI~~l~y~fp~~f---p~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd 345 (604)
T KOG0592|consen 282 AGQPPFRAANEYLIFQKIQALDYEFPEGF---PEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD 345 (604)
T ss_pred cCCCCCccccHHHHHHHHHHhcccCCCCC---CHHHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence 86 655555444444433 34556666 48889999999999999999999999999998763
No 30
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=3.3e-32 Score=298.21 Aligned_cols=287 Identities=18% Similarity=0.284 Sum_probs=245.4
Q ss_pred CCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCC-CCcc--cccc----eeeecCCCCeEEEEEecCCCCEEEEEE
Q 001366 777 NSANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFN-DSVD--VYYP----AVEMSNRSKLSCVCWNNYIKNYLASAD 848 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~-~latgg~D~~I~Iwd~~~~~~-~~~~--~~~~----~~~~~h~~~V~~v~~sp~~~~~LaSgs 848 (1092)
.|..+|++++|+|-.. .+|+|+.|-+.++|++..... .... ...+ .........|++++|+.+ |..||+|+
T Consensus 176 ~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~-G~~LatG~ 254 (524)
T KOG0273|consen 176 RHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNND-GTLLATGS 254 (524)
T ss_pred cCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCC-CCeEEEee
Confidence 4999999999999766 999999999999999874111 0110 0000 011123467999999998 99999999
Q ss_pred CCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCce-EEEEEccCCCe
Q 001366 849 YDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANV-CCVQFSAHSSH 927 (1092)
Q Consensus 849 ~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V-~sl~fsp~~~~ 927 (1092)
+||.++||+. .|..+.+|..|.++|.++.|+. ++++|++++-|+++.+||..++...+.+...+.. ..|.|-.+.
T Consensus 255 ~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk-~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~-- 330 (524)
T KOG0273|consen 255 EDGEARIWNK-DGNLISTLGQHKGPIFSLKWNK-KGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSND-- 330 (524)
T ss_pred cCcEEEEEec-CchhhhhhhccCCceEEEEEcC-CCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCc--
Confidence 9999999996 6778889999999999999999 8999999999999999999999998888854444 778888765
Q ss_pred EEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCC
Q 001366 928 LLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHT 1006 (1092)
Q Consensus 928 ~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~ 1006 (1092)
-|++.+.|+.|+|+-+... .|+.++.+|.+.|.++.|. .+..|+|+|.|++++||... ...+...+.+|.
T Consensus 331 ~F~ts~td~~i~V~kv~~~-~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~--------~~~~~~~l~~Hs 401 (524)
T KOG0273|consen 331 EFATSSTDGCIHVCKVGED-RPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMG--------QSNSVHDLQAHS 401 (524)
T ss_pred eEeecCCCceEEEEEecCC-CcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecC--------CCcchhhhhhhc
Confidence 5999999999999998754 4788999999999999998 57789999999999999987 356678889999
Q ss_pred CCeEEEEEecCC---------CEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEE
Q 001366 1007 NEKNFVGLSTAD---------GYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMV 1077 (1092)
Q Consensus 1007 ~~V~~v~~spdg---------~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~L 1077 (1092)
..|+.+.|+|+| ..+++++.|++|++||+..+.++.++ ..|..+|++|+|+|+|++|
T Consensus 402 kei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f--------------~kH~~pVysvafS~~g~yl 467 (524)
T KOG0273|consen 402 KEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTL--------------MKHQEPVYSVAFSPNGRYL 467 (524)
T ss_pred cceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEee--------------ccCCCceEEEEecCCCcEE
Confidence 999999999974 47999999999999999999988764 5789999999999999999
Q ss_pred EEEecCCeEEEEEc
Q 001366 1078 VAANSSGCIKVLQM 1091 (1092)
Q Consensus 1078 asgs~DG~V~vW~l 1091 (1092)
|+|+.||.|.+|..
T Consensus 468 AsGs~dg~V~iws~ 481 (524)
T KOG0273|consen 468 ASGSLDGCVHIWST 481 (524)
T ss_pred EecCCCCeeEeccc
Confidence 99999999999974
No 31
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=5.1e-32 Score=288.87 Aligned_cols=321 Identities=21% Similarity=0.313 Sum_probs=269.5
Q ss_pred HHHHHHHHHHHHHHHHHhhccccc-CCCCCc-------ccc-ccchhhhccchhhhhhccccccCCCCcEE--eEcCCeE
Q 001366 688 NEMRLMRNLNQLERAYFSMRSQIQ-LSDSDS-------TTR-ADNDLLRDRENLFLAQQDQEIQNPTDRLG--AFFDGLC 756 (1092)
Q Consensus 688 ~~~rl~~~~~~l~~~~~~~~~~~~-~~~~~~-------~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~l~--~~~D~~~ 756 (1092)
..-||.+.+..|+..+......+. ..++.+ .++ +..+.+.++...+..+ ..+|...+. ++.|.++
T Consensus 57 Sv~rlqKki~~Les~l~~~~~el~~g~pt~~~~~~~~wipRp~l~~~l~g~r~~vt~v----~~hp~~~~v~~as~d~ti 132 (406)
T KOG0295|consen 57 SVDRLQKKIRELESKLDETGDELIAGDPTGSKRTPALWIPRPNLVQKLAGHRSSVTRV----IFHPSEALVVSASEDATI 132 (406)
T ss_pred ccchhHHHHHHHHhhhcccccccccCCCCcCccChhhcCCCCCchhhhhccccceeee----eeccCceEEEEecCCceE
Confidence 447788888888887776554421 111111 122 3345555665555443 246766664 4569999
Q ss_pred EEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEE
Q 001366 757 KYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCW 836 (1092)
Q Consensus 757 k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~ 836 (1092)
++|++.+++... .+++|.+.|.+|+|+..|+++|+++.|-.+++||+.. ...+.....+|...|.+++|
T Consensus 133 kv~D~~tg~~e~-----~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~------~~~c~ks~~gh~h~vS~V~f 201 (406)
T KOG0295|consen 133 KVFDTETGELER-----SLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDT------FFRCIKSLIGHEHGVSSVFF 201 (406)
T ss_pred EEEEccchhhhh-----hhhccccceeEEEEecCccEEEecCCccchhheeHHH------HHHHHHHhcCcccceeeEEE
Confidence 999998877744 4669999999999999999999999999999999875 13344556789999999999
Q ss_pred ecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCc
Q 001366 837 NNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIAN 915 (1092)
Q Consensus 837 sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~ 915 (1092)
-|. +++|+|++.|.+|+.|++.+|-++.+|.+|...|..++.+. |+.++|+||.|.+|++|-+.++.|...+. |.-.
T Consensus 202 ~P~-gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~-DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~ 279 (406)
T KOG0295|consen 202 LPL-GDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQ-DGTIIASCSNDQTLRVWVVATKQCKAELREHEHP 279 (406)
T ss_pred Eec-CCeeeecccccceeEEecccceeEEeccCchHhEEEEEecC-CeeEEEecCCCceEEEEEeccchhhhhhhccccc
Confidence 998 89999999999999999999999999999999999999999 99999999999999999999998888887 6778
Q ss_pred eEEEEEccCC--------------CeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeE
Q 001366 916 VCCVQFSAHS--------------SHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKL 980 (1092)
Q Consensus 916 V~sl~fsp~~--------------~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I 980 (1092)
|.|++|.|.. ..++.+++.|++|++||+.++. .+.++.+|...|+.++|+ .|++|+|+..|+++
T Consensus 280 vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~-cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktl 358 (406)
T KOG0295|consen 280 VECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGM-CLFTLVGHDNWVRGVAFSPGGKYILSCADDKTL 358 (406)
T ss_pred eEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCe-EEEEEecccceeeeeEEcCCCeEEEEEecCCcE
Confidence 9999998742 2589999999999999999986 578899999999999999 56789999999999
Q ss_pred EEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEe
Q 001366 981 KLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYH 1034 (1092)
Q Consensus 981 ~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd 1034 (1092)
++||++ ...|..++..|..-|++++|+.+-.|+++|+-|.++++|.
T Consensus 359 rvwdl~--------~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 359 RVWDLK--------NLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred EEEEec--------cceeeeccCCCcceeEEEecCCCCceEEeccccceeeeee
Confidence 999999 5788999999999999999999999999999999999996
No 32
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=3.6e-31 Score=272.95 Aligned_cols=291 Identities=23% Similarity=0.361 Sum_probs=236.8
Q ss_pred eecCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCc
Q 001366 774 EFNNSANVICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV 852 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspd-g~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dgt 852 (1092)
.+.+|.+.|..++|+|- |..||+||.|+.|+||+... .+..... ....-+|+..|..|+|+|. +++||++|+|.+
T Consensus 9 ~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~--~~s~~ck-~vld~~hkrsVRsvAwsp~-g~~La~aSFD~t 84 (312)
T KOG0645|consen 9 KLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSS--GDSWTCK-TVLDDGHKRSVRSVAWSPH-GRYLASASFDAT 84 (312)
T ss_pred eecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCC--CCcEEEE-EeccccchheeeeeeecCC-CcEEEEeeccce
Confidence 46789999999999998 99999999999999999874 1111111 1222369999999999998 889999999999
Q ss_pred EEEEECCCC--ceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCC---ceeeeEe-cCCceEEEEEccCCC
Q 001366 853 VKLWDACTG--QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEK---NSLATIK-NIANVCCVQFSAHSS 926 (1092)
Q Consensus 853 V~IWD~~tg--~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~---~~l~~l~-~~~~V~sl~fsp~~~ 926 (1092)
+.||.-..+ +++.++.||...|.|++|++ ++++||+||.|++|-||.+..+ .++..++ |...|--+.|+|...
T Consensus 85 ~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~-sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~d 163 (312)
T KOG0645|consen 85 VVIWKKEDGEFECVATLEGHENEVKCVAWSA-SGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTED 163 (312)
T ss_pred EEEeecCCCceeEEeeeeccccceeEEEEcC-CCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcc
Confidence 999986644 68999999999999999999 9999999999999999999854 4566666 678899999999875
Q ss_pred eEEEEEECCCeEEEEEcCCC--CcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEc
Q 001366 927 HLLAFGSADYRTYCYDLRNA--RAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFS 1003 (1092)
Q Consensus 927 ~~latgs~Dg~I~vwDlr~~--~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~ 1003 (1092)
+|++++.|.+|++|+-... -....++.+|...|.+++|. .+..|++++.|++++||-.... .-.
T Consensus 164 -lL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~------------~~~ 230 (312)
T KOG0645|consen 164 -LLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD------------LSG 230 (312)
T ss_pred -eeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC------------cch
Confidence 9999999999999987632 23567899999999999999 4779999999999999986521 112
Q ss_pred CCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCC-CCEEEEEec
Q 001366 1004 GHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRR-SDMVVAANS 1082 (1092)
Q Consensus 1004 ~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd-~~~Lasgs~ 1082 (1092)
.|...++.++|. ...||+++.|+.|++|.....-.-..+. .+ ......|...|++|+|.|. .+.|++|+.
T Consensus 231 ~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~-----l~--~~~~~aHe~dVNsV~w~p~~~~~L~s~~D 301 (312)
T KOG0645|consen 231 MHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWN-----LL--AKKEGAHEVDVNSVQWNPKVSNRLASGGD 301 (312)
T ss_pred hcccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHH-----HH--HhhhcccccccceEEEcCCCCCceeecCC
Confidence 377889999998 5689999999999999755321000010 00 0123568889999999995 789999999
Q ss_pred CCeEEEEEc
Q 001366 1083 SGCIKVLQM 1091 (1092)
Q Consensus 1083 DG~V~vW~l 1091 (1092)
||.|++|.+
T Consensus 302 DG~v~~W~l 310 (312)
T KOG0645|consen 302 DGIVNFWEL 310 (312)
T ss_pred CceEEEEEe
Confidence 999999986
No 33
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-34 Score=309.96 Aligned_cols=254 Identities=20% Similarity=0.249 Sum_probs=195.3
Q ss_pred CCchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecC
Q 001366 209 SGFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSN 284 (1092)
Q Consensus 209 ~~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (1092)
.+...|.+.+.++ +.|.||+-+..| ++...|-|+..-..+ ....+-..++..++...+||.|+.+.-+.+..
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~d----t~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~ 97 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKD----TGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTE 97 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcc----cCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccC
Confidence 3455666655543 678888877643 233333333211111 12344456666778889999999988887766
Q ss_pred CCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc
Q 001366 285 GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~ 364 (1092)
.-+++ +++|+.||.|+-.|++.+. +++..++.|+..|+.||.|||++|||||||||+||||+.
T Consensus 98 ~kLyl----------------Vld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~ 160 (357)
T KOG0598|consen 98 EKLYL----------------VLDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDE 160 (357)
T ss_pred CeEEE----------------EEeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecC
Confidence 66653 8999999999999988775 555589999999999999999999999999999999999
Q ss_pred CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 365 ~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
.|+++|+||||++.....+
T Consensus 161 ~GHi~LtDFgL~k~~~~~~------------------------------------------------------------- 179 (357)
T KOG0598|consen 161 QGHIKLTDFGLCKEDLKDG------------------------------------------------------------- 179 (357)
T ss_pred CCcEEEeccccchhcccCC-------------------------------------------------------------
Confidence 9999999999998744100
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~e 524 (1092)
..-.+.|||+.|||||++.+..|+..+|+|||||++||
T Consensus 180 ------------------------------------------~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYe 217 (357)
T KOG0598|consen 180 ------------------------------------------DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYE 217 (357)
T ss_pred ------------------------------------------CccccccCCccccChHHHhcCCCCcccchHhHHHHHHH
Confidence 00115799999999999999999999999999999999
Q ss_pred HcCC---CCcHHHHHHHHHhcccc-CCCCCCCCCChhHHHHHHhccccCCCCCC----CHHHHhhhhhhhhh
Q 001366 525 LFGR---FDSERALAAAMSDLRDR-ILPPSFLSENPKEAGFCLWQLHPEPLSRP----TTREILQSEVTNEF 588 (1092)
Q Consensus 525 ll~~---f~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~li~~lL~~dP~~Rp----sa~eiL~~~~~~~~ 588 (1092)
||+| |.........-+.++.+ +.+|.++ +++.++|+.++|..||.+|. .+.+|-.||||...
T Consensus 218 ML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~l--s~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~i 287 (357)
T KOG0598|consen 218 MLTGKPPFYAEDVKKMYDKILKGKLPLPPGYL--SEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGI 287 (357)
T ss_pred HhhCCCCCcCccHHHHHHHHhcCcCCCCCccC--CHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccC
Confidence 9986 66555555555555555 4444433 78999999999999999995 68999999999864
No 34
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=313.05 Aligned_cols=251 Identities=19% Similarity=0.160 Sum_probs=187.3
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+..|.||.+...+. +...+.|...-.+... ...--++.+++...+||||+..+..-.....
T Consensus 28 Gs~G~V~l~~~~~~----g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~-------------- 88 (313)
T KOG0198|consen 28 GSFGSVYLATNKKT----GELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSREN-------------- 88 (313)
T ss_pred ccceEEEEEEecCC----Ccceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccC--------------
Confidence 34799999998552 3334443332221111 3334667778888899999964332111110
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc-CCcEEEecccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGPIIQKET 379 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~-~~~vkl~Dfg~~~~~ 379 (1092)
.-.+++|||+.||+|.++++..+..+++..++.+.+||++||.|||++|||||||||+|||+++ ++.+||+|||+++..
T Consensus 89 ~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 89 DEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred eeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 0124589999999999999887657888899999999999999999999999999999999999 699999999998775
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
.....
T Consensus 169 ~~~~~--------------------------------------------------------------------------- 173 (313)
T KOG0198|consen 169 ESKGT--------------------------------------------------------------------------- 173 (313)
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 41000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC-CCccccchhhhHHHHHHcCCCCcHHH----
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-CTTSSNIYSLGVLFFELFGRFDSERA---- 534 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~t~~sDIwSLGvll~ell~~f~~~~~---- 534 (1092)
.........||+.|||||++.++. ..+++|||||||++.||+|+-.++..
T Consensus 174 -------------------------~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~ 228 (313)
T KOG0198|consen 174 -------------------------KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE 228 (313)
T ss_pred -------------------------cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch
Confidence 000111568999999999999633 34699999999999999998555544
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
.............|+.....+++..+|+.+||..+|..||||.++|+|||......
T Consensus 229 ~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 229 AEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred HHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 34445555555666666667899999999999999999999999999999987544
No 35
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.4e-33 Score=306.83 Aligned_cols=264 Identities=17% Similarity=0.211 Sum_probs=195.2
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCcccccccccccc-ccccccCchhhHhhhhhhhhhccCCCCC-CCccccceecCCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTK-AFVTTTMPSDAALKAAGAMMVASNASPK-PVGVGTAVVSNGS 286 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 286 (1092)
+..|.....++ -.|+||+|.. +..++.++.| |.........-..+++++.++...+|+| |+.+.+....+..
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~----~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~ 85 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARS----KRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNN 85 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEE----ecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccc
Confidence 33344443344 3799999997 4445555553 3322222233456788999999999999 8876666544332
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL 363 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~ 363 (1092)
+. ..+.-+ .++|| ..-+|..++.... ..++...++.+++||+.||+|||++||+||||||.||||+
T Consensus 86 ~~---~~~~l~-------lvfe~-~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~ 154 (323)
T KOG0594|consen 86 HR---GIGKLY-------LVFEF-LDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLIS 154 (323)
T ss_pred cc---ccceEE-------EEEEe-ecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEEC
Confidence 11 111111 13444 4579999998765 3466678999999999999999999999999999999999
Q ss_pred cCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCc
Q 001366 364 QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANE 443 (1092)
Q Consensus 364 ~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1092)
++|.+|++|||+|+...
T Consensus 155 ~~G~lKlaDFGlAra~~--------------------------------------------------------------- 171 (323)
T KOG0594|consen 155 SSGVLKLADFGLARAFS--------------------------------------------------------------- 171 (323)
T ss_pred CCCcEeeeccchHHHhc---------------------------------------------------------------
Confidence 99999999999998543
Q ss_pred cccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHH
Q 001366 444 SDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLF 522 (1092)
Q Consensus 444 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll 522 (1092)
.+...++..++|.||+|||++.|. .|+..+||||+|||+
T Consensus 172 ----------------------------------------ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIf 211 (323)
T KOG0594|consen 172 ----------------------------------------IPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIF 211 (323)
T ss_pred ----------------------------------------CCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHH
Confidence 122334577899999999999995 799999999999999
Q ss_pred HHHcCC---CCcHHHHHHHHHhccccCCCC----------------------------CCCCCChhHHHHHHhccccCCC
Q 001366 523 FELFGR---FDSERALAAAMSDLRDRILPP----------------------------SFLSENPKEAGFCLWQLHPEPL 571 (1092)
Q Consensus 523 ~ell~~---f~~~~~~~~~~~~~~~~~~p~----------------------------~~~~~~~~~~~li~~lL~~dP~ 571 (1092)
+||+++ |++..+..+...+.+-.-.|. ..+...+...+++.+||+++|.
T Consensus 212 aEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~ 291 (323)
T KOG0594|consen 212 AEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPA 291 (323)
T ss_pred HHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcc
Confidence 999985 888888777766654321110 0122335778999999999999
Q ss_pred CCCCHHHHhhhhhhhhhhccc
Q 001366 572 SRPTTREILQSEVTNEFQEVC 592 (1092)
Q Consensus 572 ~Rpsa~eiL~~~~~~~~~~~~ 592 (1092)
+|.||..+|.||||.+.....
T Consensus 292 ~R~Sa~~al~h~yf~~~~~~~ 312 (323)
T KOG0594|consen 292 KRISAKGALTHPYFSELPEKS 312 (323)
T ss_pred cCcCHHHHhcChhhcccccch
Confidence 999999999999998875443
No 36
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=5.7e-31 Score=268.11 Aligned_cols=276 Identities=17% Similarity=0.288 Sum_probs=238.5
Q ss_pred cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeec
Q 001366 747 RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS 826 (1092)
Q Consensus 747 ~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~ 826 (1092)
..++++|-+|+||......+.+++. +..+.|+.+.+.|++..||+|+. ..|++||+.+... .......+
T Consensus 13 LvsA~YDhTIRfWqa~tG~C~rTiq-----h~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np-----~Pv~t~e~ 81 (311)
T KOG0315|consen 13 LVSAGYDHTIRFWQALTGICSRTIQ-----HPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNP-----NPVATFEG 81 (311)
T ss_pred EEeccCcceeeeeehhcCeEEEEEe-----cCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCC-----CceeEEec
Confidence 3578999999999999888887665 56778999999999999999985 4899999986321 22334567
Q ss_pred CCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCce
Q 001366 827 NRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNS 906 (1092)
Q Consensus 827 h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~ 906 (1092)
|...|+.|.|..+ +.+++|||.||+++|||++.-.+-+.|. |..+|++|..+| +...|++|..+|.|++||+....+
T Consensus 82 h~kNVtaVgF~~d-grWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhp-nQteLis~dqsg~irvWDl~~~~c 158 (311)
T KOG0315|consen 82 HTKNVTAVGFQCD-GRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHP-NQTELISGDQSGNIRVWDLGENSC 158 (311)
T ss_pred cCCceEEEEEeec-CeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecC-CcceEEeecCCCcEEEEEccCCcc
Confidence 8999999999998 9999999999999999999877777775 779999999999 788899999999999999998877
Q ss_pred eeeEe--cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCC-----cceEEecCCCCCeEEEEEc-CCCEEEEEECCC
Q 001366 907 LATIK--NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNAR-----APWCVLAGHEKAVSYVKFL-DSGTLVTASTDN 978 (1092)
Q Consensus 907 l~~l~--~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~-----~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg 978 (1092)
.+.+- ....|.++...|+|+ +++++...|..++|++-+.. .|+..++.|...+..+.++ ++++|+++|.|.
T Consensus 159 ~~~liPe~~~~i~sl~v~~dgs-ml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdk 237 (311)
T KOG0315|consen 159 THELIPEDDTSIQSLTVMPDGS-MLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDK 237 (311)
T ss_pred ccccCCCCCcceeeEEEcCCCc-EEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCc
Confidence 77665 346799999999996 88889999999999987532 2567789999999999999 778999999999
Q ss_pred eEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeee
Q 001366 979 KLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSY 1044 (1092)
Q Consensus 979 ~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~ 1044 (1092)
+++||++.+. ......+.+|..+++.++||.||.||++||.|+.+++|+...++.+...
T Consensus 238 tv~iwn~~~~-------~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy 296 (311)
T KOG0315|consen 238 TVKIWNTDDF-------FKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQY 296 (311)
T ss_pred eEEEEecCCc-------eeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeec
Confidence 9999999842 2455678899999999999999999999999999999999998877654
No 37
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=1.2e-30 Score=288.97 Aligned_cols=332 Identities=20% Similarity=0.253 Sum_probs=258.6
Q ss_pred hhccchhhhhhccccccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEE
Q 001366 726 LRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKI 805 (1092)
Q Consensus 726 l~~~~~~~~~~~~~~~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~I 805 (1092)
+.+|...+.+..+ .-..|-..++++-|+++.|++-.-|+...+ ++.|+.-|.|+.|+|||++|||+|.|++|.|
T Consensus 143 i~GhSr~ins~~~-KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s-----~r~HskFV~~VRysPDG~~Fat~gsDgki~i 216 (603)
T KOG0318|consen 143 ITGHSRRINSVDF-KPSRPFRIATGSDDNTVAFFEGPPFKFKSS-----FREHSKFVNCVRYSPDGSRFATAGSDGKIYI 216 (603)
T ss_pred eeccceeEeeeec-cCCCceEEEeccCCCeEEEeeCCCeeeeec-----ccccccceeeEEECCCCCeEEEecCCccEEE
Confidence 3444444444332 123555667888999999988776665543 4579999999999999999999999999999
Q ss_pred EEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceE---------------------
Q 001366 806 FEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTV--------------------- 864 (1092)
Q Consensus 806 wd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i--------------------- 864 (1092)
||=.+.. . .........|++.|.+++|+|| +..++|+|.|.+++|||+.+.+++
T Consensus 217 yDGktge---~-vg~l~~~~aHkGsIfalsWsPD-s~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd 291 (603)
T KOG0318|consen 217 YDGKTGE---K-VGELEDSDAHKGSIFALSWSPD-STQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKD 291 (603)
T ss_pred EcCCCcc---E-EEEecCCCCccccEEEEEECCC-CceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCC
Confidence 9965421 0 0111113469999999999999 999999999999999999765332
Q ss_pred ----------------------EEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCcee---------------
Q 001366 865 ----------------------SHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSL--------------- 907 (1092)
Q Consensus 865 ----------------------~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l--------------- 907 (1092)
..+.+|.+.|+++..+| +++.|+||+.||.|.-||+.++..-
T Consensus 292 ~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~-d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~ 370 (603)
T KOG0318|consen 292 HLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSP-DGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMA 370 (603)
T ss_pred eEEEEEcCcEEEEecccCCChhheecccccceeEEEEcC-CCCEEEeeccCceEEEEecCCccccccccccccceEEEEe
Confidence 23346999999999999 8899999999999999998753210
Q ss_pred ----------------eeE------------------------------------------e---------cCCceEEEE
Q 001366 908 ----------------ATI------------------------------------------K---------NIANVCCVQ 920 (1092)
Q Consensus 908 ----------------~~l------------------------------------------~---------~~~~V~sl~ 920 (1092)
+.+ + ..-...+++
T Consensus 371 ~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vA 450 (603)
T KOG0318|consen 371 ASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVA 450 (603)
T ss_pred ecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEE
Confidence 000 0 001135888
Q ss_pred EccCCCeEEEEEECCCeEEEEEcCCCC-cceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCce
Q 001366 921 FSAHSSHLLAFGSADYRTYCYDLRNAR-APWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNAC 998 (1092)
Q Consensus 921 fsp~~~~~latgs~Dg~I~vwDlr~~~-~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~ 998 (1092)
++|++. .+++|+.|+.|++|.+.... .....+..|..+|++|+|+ ++.+|++|...+.+.+||+.+... .
T Consensus 451 v~~~~~-~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~-------~ 522 (603)
T KOG0318|consen 451 VSPDGS-EVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREV-------K 522 (603)
T ss_pred EcCCCC-EEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCce-------e
Confidence 999985 89999999999999998754 3445677899999999999 677899999999999999985321 1
Q ss_pred eEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEE
Q 001366 999 SLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVV 1078 (1092)
Q Consensus 999 ~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~La 1078 (1092)
.....-|+..|++++|+|+..++|+||.|-.|.||++..+.....++ ..|...|+.+.|- +...|+
T Consensus 523 ~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~ik-------------nAH~~gVn~v~wl-de~tvv 588 (603)
T KOG0318|consen 523 TNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHIIIK-------------NAHLGGVNSVAWL-DESTVV 588 (603)
T ss_pred cceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhheEec-------------cccccCceeEEEe-cCceEE
Confidence 22334499999999999999999999999999999998776553333 5677779999998 556788
Q ss_pred EEecCCeEEEEEc
Q 001366 1079 AANSSGCIKVLQM 1091 (1092)
Q Consensus 1079 sgs~DG~V~vW~l 1091 (1092)
++|.|..||+|.+
T Consensus 589 SsG~Da~iK~W~v 601 (603)
T KOG0318|consen 589 SSGQDANIKVWNV 601 (603)
T ss_pred eccCcceeEEecc
Confidence 9999999999986
No 38
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=2e-30 Score=283.88 Aligned_cols=284 Identities=25% Similarity=0.390 Sum_probs=245.6
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.+.+|..+|++++|+|++++|++++.|+.|++|++.... .......|...+.++.|+++ ++.|++++.||.|
T Consensus 4 ~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~-------~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i 75 (289)
T cd00200 4 TLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE-------LLRTLKGHTGPVRDVAASAD-GTYLASGSSDKTI 75 (289)
T ss_pred HhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC-------cEEEEecCCcceeEEEECCC-CCEEEEEcCCCeE
Confidence 356899999999999999999999999999999987521 22334567888999999998 6899999999999
Q ss_pred EEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEE
Q 001366 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFG 932 (1092)
Q Consensus 854 ~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latg 932 (1092)
++||+.+++.+..+..|...+.++.|++ ++.++++++.|+.|++||+++++....+. +...+.+++|+|++ .+++++
T Consensus 76 ~i~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~ 153 (289)
T cd00200 76 RLWDLETGECVRTLTGHTSYVSSVAFSP-DGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDG-TFVASS 153 (289)
T ss_pred EEEEcCcccceEEEeccCCcEEEEEEcC-CCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcC-CEEEEE
Confidence 9999999888888999999999999999 67888888889999999999888888887 66789999999996 478888
Q ss_pred ECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC-CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEE
Q 001366 933 SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD-SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNF 1011 (1092)
Q Consensus 933 s~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~-~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~ 1011 (1092)
+.|+.|++||+++.+ ....+..|...|.++.|++ +..+++++.|+.|++||++. ...+..+..|...+.+
T Consensus 154 ~~~~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~--------~~~~~~~~~~~~~i~~ 224 (289)
T cd00200 154 SQDGTIKLWDLRTGK-CVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLST--------GKCLGTLRGHENGVNS 224 (289)
T ss_pred cCCCcEEEEEccccc-cceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCC--------CceecchhhcCCceEE
Confidence 889999999998765 3566778998999999994 45888999999999999983 4556667688889999
Q ss_pred EEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1012 VGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1012 v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
+.|+|++.++++++.|+.|++|+...+.++..+. .|...|.+++|+|++..|++++.||.|++|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~--------------~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 225 VAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLS--------------GHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEcc--------------ccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 9999998899998889999999998766655432 4567899999999999999999999999996
No 39
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1.7e-30 Score=297.69 Aligned_cols=319 Identities=19% Similarity=0.357 Sum_probs=269.3
Q ss_pred EEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCC-CcEEEEEcCCCCCCCcccccceeeec
Q 001366 748 LGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS-KKIKIFEFNALFNDSVDVYYPAVEMS 826 (1092)
Q Consensus 748 l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D-~~I~Iwd~~~~~~~~~~~~~~~~~~~ 826 (1092)
..+|..|...+.++..+.+...+.. ...+|..++|+..|+.||.|+.. |.+-||++.. -.+.....+
T Consensus 281 vvgFssG~f~LyelP~f~lih~LSi-----s~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqs-------EsYVlKQQg 348 (893)
T KOG0291|consen 281 VVGFSSGEFGLYELPDFNLIHSLSI-----SDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQS-------ESYVLKQQG 348 (893)
T ss_pred EEEecCCeeEEEecCCceEEEEeec-----ccceeeEEEecccCCEEEEcCCccceEEEEEeec-------cceeeeccc
Confidence 4567778888999988887765553 45689999999999999998855 7899999976 245556678
Q ss_pred CCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCce
Q 001366 827 NRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNS 906 (1092)
Q Consensus 827 h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~ 906 (1092)
|-..++|++++|| ++++|||+.||.|+|||..+|-|+.+|..|+..|+.+.|+. .++.+++.|.||+|+.||+...++
T Consensus 349 H~~~i~~l~YSpD-gq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~-~g~~llssSLDGtVRAwDlkRYrN 426 (893)
T KOG0291|consen 349 HSDRITSLAYSPD-GQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTA-RGNVLLSSSLDGTVRAWDLKRYRN 426 (893)
T ss_pred cccceeeEEECCC-CcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEe-cCCEEEEeecCCeEEeeeecccce
Confidence 9999999999998 99999999999999999999999999999999999999999 899999999999999999999999
Q ss_pred eeeEecCC--ceEEEEEccCCCeEEEEEECCC-eEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEE
Q 001366 907 LATIKNIA--NVCCVQFSAHSSHLLAFGSADY-RTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKL 982 (1092)
Q Consensus 907 l~~l~~~~--~V~sl~fsp~~~~~latgs~Dg-~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~v 982 (1092)
.+++..+. ...|++..|.|. ++.+|+.|. .|++|++.+++ .+.++.||.++|.+++|+ .+..|+|+|.|++|++
T Consensus 427 fRTft~P~p~QfscvavD~sGe-lV~AG~~d~F~IfvWS~qTGq-llDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRi 504 (893)
T KOG0291|consen 427 FRTFTSPEPIQFSCVAVDPSGE-LVCAGAQDSFEIFVWSVQTGQ-LLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRI 504 (893)
T ss_pred eeeecCCCceeeeEEEEcCCCC-EEEeeccceEEEEEEEeecCe-eeehhcCCCCcceeeEEccccCeEEeccccceEEE
Confidence 99998655 468999999996 777777775 69999999986 578999999999999998 7779999999999999
Q ss_pred EEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCcccc----
Q 001366 983 WDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETD---- 1058 (1092)
Q Consensus 983 WDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~---- 1058 (1092)
||+-.. ...+.++ .+...+..++|+|+|+-||.+..||.|.+||...+..+.++. |.-+...++...
T Consensus 505 W~if~s-------~~~vEtl-~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~Id-grkD~~~gR~~~D~~t 575 (893)
T KOG0291|consen 505 WDIFSS-------SGTVETL-EIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSID-GRKDLSGGRKETDRIT 575 (893)
T ss_pred EEeecc-------CceeeeE-eeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeecccc-chhhccccccccceee
Confidence 999732 2233344 356778999999999999999999999999998887776654 222333333211
Q ss_pred ---CCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1059 ---DDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1059 ---~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
...+.+.+.+|+++||..+++||....|++|++
T Consensus 576 a~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v 611 (893)
T KOG0291|consen 576 AENSAKGKTFTTICYSADGKCILAGGESNSICIYDV 611 (893)
T ss_pred hhhcccCCceEEEEEcCCCCEEEecCCcccEEEEEC
Confidence 123467999999999999999999999999986
No 40
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=9.4e-34 Score=320.38 Aligned_cols=463 Identities=19% Similarity=0.176 Sum_probs=324.2
Q ss_pred cccccc-cceecccccCCcccccccccccCCcccccccccccccccCCCCCCCchhhhhhcccCcc-CccccCCCCCCCC
Q 001366 4 MDEGVG-EVAPVNAAEGAPLQNKEIEYSLRPESCNNVLESGEMAIPEGTSSDGSFQILADMLEGKS-VNRIVSPMDASEN 81 (1092)
Q Consensus 4 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 81 (1092)
|+++.+ ++.++|.+...|+|.|..|.|+++ +...++.-.++.+.++ ++-.+++. +-| -..+...
T Consensus 1 ~~~~~~~~~~~~e~~~~~q~~ik~~e~s~~~-~~~~~~~~~~~~~sr~----------a~~~e~~~~~~~---~g~~~~~ 66 (516)
T KOG1033|consen 1 RNQEPVMERQRIERVATVQTQIKAREDSFPA-NKSKVRHNKRVITSRE----------ANDFEPGQCLGR---GGFGVVF 66 (516)
T ss_pred CCCCCCCCcCccccceeeeeeeccccccccc-cccchhhhhhhhhhhh----------hccccccccccc---cCccccC
Confidence 577788 999999999999999999999997 6777777777775544 22111111 111 1112333
Q ss_pred CCCCCCCCcCceEEEEeecccCCCcceeeeccCcccccccc-cccccceeeccCCCCCCCCCCCCCCCccccccccccCC
Q 001366 82 PCPHSDSDAGIMVEELTVRKSNSSNLAIVGTSNHRERISTR-HDRWQHLYQLGSGSGSGSSRGDRGHGRTMLGAWEDVGD 160 (1092)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (1092)
+.+..+++.+..|++|||+||..++..+++...+..+-..- ..+..|.|..+.+.+..-.+......+......++++.
T Consensus 67 ~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~~~~~~qe~~d~~~l~~~~~~~~~~l~s 146 (516)
T KOG1033|consen 67 SAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYERPPLGWQEEMDLKLLDDETSSERSNLPS 146 (516)
T ss_pred CccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceecCCCCcccchhhhhhhhccCCcchhcccc
Confidence 44677888899999999999999999988877776554444 56677778877777655444333445556666777777
Q ss_pred CCcccccc-cccccccchhHhhhcccccccCCcCCccccCcceeeecccCCchhHHHhhhccccceeeeCCCCCcccccc
Q 001366 161 TSLHDFIT-QKPLNDEHNTILEQSANTENDGLSGNMLSHGSIRTKMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERR 239 (1092)
Q Consensus 161 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~g~Gvv~~g~~~~~~~~~~ 239 (1092)
.++++.-. +..+.-......+++...+..+++.++..|.+..+++++..+++.+...+++.||+.-..++.........
T Consensus 147 l~~~~~~~~q~~~~~~~~~A~e~s~~~~~~~v~~~~~s~s~~~~~s~s~~~~~~~~~rk~s~~k~~~~~~~~~tdsd~~e 226 (516)
T KOG1033|consen 147 LSERRTSKRQTAELPRVSAAAESSFHVFRAIVPVENQSHSQESSSSISQHNGSRSEFRKTSVSKASRFEGPDCTDSDLEE 226 (516)
T ss_pred ccchhccchhhhhcccccccchhhhccccccCchhhcccCcccccchhhcccchhhhhhhhhccccccCCCccccccccc
Confidence 77776655 33334455566677777888889999999999999999999999999999999999999888755444311
Q ss_pred ccccc--------------------------cccccccCchh---hHhhhhhhhhhcc-C----CCCCCCccccceecCC
Q 001366 240 GMIDT--------------------------KAFVTTTMPSD---AALKAAGAMMVAS-N----ASPKPVGVGTAVVSNG 285 (1092)
Q Consensus 240 ~~~~~--------------------------~~~~~~~~~~~---~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~ 285 (1092)
...+. .++....+..+ ..+......-+.. . ....+..+.+...++.
T Consensus 227 d~~~~~~s~~~~~~~~~~s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~ 306 (516)
T KOG1033|consen 227 DEMQGSDSKESSRHEESGSSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNR 306 (516)
T ss_pred cccccCcccCcccccccccccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCc
Confidence 11111 00000000000 0000000000000 0 0001111111111111
Q ss_pred CCC-----------CCccCCCCCccccCCCcccccCCCCCHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHhhhcCccc
Q 001366 286 SLD-----------LGARTGVPASCWIGGLRQGSSDHGVNLREWLN--ARGHKGKRIECLYIFRQIVALVDYHHTQGVTF 352 (1092)
Q Consensus 286 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~--~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvH 352 (1092)
... ..+.++- +. -..+.|..|+-.+|.+||+ ..+...+....+.+|+|+..+|+| +|.+|
T Consensus 307 s~~~d~~~s~~~~~~~~~v~~-~~---~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ih 379 (516)
T KOG1033|consen 307 SILEDLRPSLFESSKRNKVGK-KV---YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIH 379 (516)
T ss_pred ccccCCCCchhhhcccccccc-cc---chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchh
Confidence 110 0000110 00 1345799999999999995 445567888999999999999999 99999
Q ss_pred cCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccC
Q 001366 353 LDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPS 432 (1092)
Q Consensus 353 rDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (1092)
|||||.||+...+.++||.|||+......-.
T Consensus 380 rdlkp~nif~~~d~q~kIgDFgl~ts~~~~~------------------------------------------------- 410 (516)
T KOG1033|consen 380 RDLKPSNIFFSDDDQLKIGDFGLVTSQDKDE------------------------------------------------- 410 (516)
T ss_pred hhccccccccccchhhhhhhhhheeecccCC-------------------------------------------------
Confidence 9999999999999999999999875533100
Q ss_pred ccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCcc
Q 001366 433 KYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTS 512 (1092)
Q Consensus 433 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~ 512 (1092)
+........+..+||+|||+||+|.+..|+.+
T Consensus 411 ------------------------------------------------~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~k 442 (516)
T KOG1033|consen 411 ------------------------------------------------TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEK 442 (516)
T ss_pred ------------------------------------------------cccchhhhhhhcccccccCCHHHHhhhhhhhh
Confidence 00112233457899999999999999999999
Q ss_pred ccchhhhHHHHHHcCCCCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001366 513 SNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1092)
Q Consensus 513 sDIwSLGvll~ell~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~ 584 (1092)
+||||||+|||||+..|.+..+....+.+++++++||.+....|.+..||++||++.|.+||++.+.--|+|
T Consensus 443 vdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~ 514 (516)
T KOG1033|consen 443 VDIYALGLILAELLIQFSTQFERIATLTDIRDGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIEVALHEF 514 (516)
T ss_pred cchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCChHHhhcCcHHHHHHHHhcCCCcccCchHHHHhhhhh
Confidence 999999999999999999999999999999999999999999999999999999999999997766555554
No 41
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-33 Score=319.76 Aligned_cols=254 Identities=15% Similarity=0.136 Sum_probs=199.1
Q ss_pred cCCchhHHHhhhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 208 KSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 208 ~~~f~~~~~~~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
...+-.-+.|-..+-.|.||.+... ...++++.|.+ ..........-+.+...++..+|+|++..++...+...
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~----~~~~~VaiK~m-~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~de- 344 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKI----STKQEVAIKRM-DLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDE- 344 (550)
T ss_pred hhhhhcchhhhccccccceeeeeec----cCCceEEEEEE-EeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccce-
Confidence 3344444566777778999999872 23455555443 11223334556777778889999999987777554422
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~ 367 (1092)
-+++|||++||+|.|.+... .+++.++..|++++|.||+|||.+||+|||||.+|||++.+|.
T Consensus 345 ---------------LWVVMEym~ggsLTDvVt~~--~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~ 407 (550)
T KOG0578|consen 345 ---------------LWVVMEYMEGGSLTDVVTKT--RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGS 407 (550)
T ss_pred ---------------eEEEEeecCCCchhhhhhcc--cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCc
Confidence 24589999999999999765 5889899999999999999999999999999999999999999
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
|||+|||++..+.+..
T Consensus 408 vKltDFGFcaqi~~~~---------------------------------------------------------------- 423 (550)
T KOG0578|consen 408 VKLTDFGFCAQISEEQ---------------------------------------------------------------- 423 (550)
T ss_pred EEEeeeeeeecccccc----------------------------------------------------------------
Confidence 9999999987755210
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~ 527 (1092)
..-++.+|||+|||||++....|++++||||||++++||+-
T Consensus 424 ---------------------------------------~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMve 464 (550)
T KOG0578|consen 424 ---------------------------------------SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVE 464 (550)
T ss_pred ---------------------------------------CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhc
Confidence 00126799999999999999999999999999999999997
Q ss_pred C---CCcHHHHHHHHHhccccCCC-CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 528 R---FDSERALAAAMSDLRDRILP-PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 528 ~---f~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
| |-.+..+.+++.......+. ......++.+++|+.+||+.||.+|++|.|||+||||..
T Consensus 465 GEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 465 GEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred CCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 5 44455555555554444332 344567899999999999999999999999999999954
No 42
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=2e-31 Score=282.81 Aligned_cols=290 Identities=19% Similarity=0.323 Sum_probs=249.6
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.+.+|.+.|.|+++.|..+.|+||+.|++|+|||+.+ ........+|...|..|++++- ..++.+++.|+.|
T Consensus 146 Vi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlat-------g~LkltltGhi~~vr~vavS~r-HpYlFs~gedk~V 217 (460)
T KOG0285|consen 146 VISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLAT-------GQLKLTLTGHIETVRGVAVSKR-HPYLFSAGEDKQV 217 (460)
T ss_pred hhhhccceEEEEeeCCCceeEEecCCCceeEEEEccc-------CeEEEeecchhheeeeeeeccc-CceEEEecCCCee
Confidence 4669999999999999999999999999999999986 2334456679999999999987 7799999999999
Q ss_pred EEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEE
Q 001366 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFG 932 (1092)
Q Consensus 854 ~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latg 932 (1092)
+-||++..+.++.+-||-..|.|++.+| .-..|++|+.|.+++|||+++...+.++. |...|.+|.+.|.++ .+++|
T Consensus 218 KCwDLe~nkvIR~YhGHlS~V~~L~lhP-Tldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dp-qvit~ 295 (460)
T KOG0285|consen 218 KCWDLEYNKVIRHYHGHLSGVYCLDLHP-TLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDP-QVITG 295 (460)
T ss_pred EEEechhhhhHHHhccccceeEEEeccc-cceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCC-ceEEe
Confidence 9999999999999999999999999999 67899999999999999999999999998 788999999999876 79999
Q ss_pred ECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCE-EEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEE
Q 001366 933 SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGT-LVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNF 1011 (1092)
Q Consensus 933 s~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~-L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~ 1011 (1092)
+.|++|++||++.++. ..++..|...|.+++.+|... ++|+|.| .|+-|++. .+..+..+.+|..-|++
T Consensus 296 S~D~tvrlWDl~agkt-~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p--------~g~f~~nlsgh~~iint 365 (460)
T KOG0285|consen 296 SHDSTVRLWDLRAGKT-MITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLP--------EGEFLQNLSGHNAIINT 365 (460)
T ss_pred cCCceEEEeeeccCce-eEeeecccceeeEEecCCchhhhhccCCc-cceeccCC--------ccchhhccccccceeee
Confidence 9999999999999875 578889999999999986655 5666655 69999998 35566778999999999
Q ss_pred EEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1012 VGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1012 v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
++...|| ++++|+++|.+.+||..++-..+... .+..... -.....|.+.||...+..|+||..|.+|++|+
T Consensus 366 l~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~-----t~vqpGS-l~sEagI~as~fDktg~rlit~eadKtIk~~k 437 (460)
T KOG0285|consen 366 LSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQ-----TIVQPGS-LESEAGIFASCFDKTGSRLITGEADKTIKMYK 437 (460)
T ss_pred eeeccCc-eEEEcCCceEEEEEecCcCccccccc-----ccccCCc-cccccceeEEeecccCceEEeccCCcceEEEe
Confidence 9988776 88899999999999998876554432 0111111 12345699999999999999999999999996
No 43
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.7e-33 Score=312.56 Aligned_cols=242 Identities=17% Similarity=0.171 Sum_probs=188.1
Q ss_pred hccccceeeeCCCCCcccccccccccccc--ccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAF--VTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
..+.+|+||||++.+ ..+.+|.|.. .+.+.+. ..--.++..+++..+||||+..++..-...
T Consensus 11 G~Gsfg~VYKgrrK~----t~~~vAik~i~K~gr~~k~-l~~l~~ev~i~r~lkHpniv~m~esfEt~~----------- 74 (808)
T KOG0597|consen 11 GEGSFGRVYKGRRKY----TIQVVAIKFIDKSGRNEKE-LKNLRQEVRILRSLKHPNIVEMLESFETSA----------- 74 (808)
T ss_pred cCCccceeeeccccc----ceeEEEEEEehhcCCchHH-HHHHHHHHHHHHhcCCcchhhHHHhhcccc-----------
Confidence 445689999999944 3444555432 2222211 122345667899999999998666533211
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
+-.++.|||.| +|+.+|...+. +++..++.|..|++.||.|||+.+|+|||+||.||||...+.+|++|||+|
T Consensus 75 -----~~~vVte~a~g-~L~~il~~d~~-lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~A 147 (808)
T KOG0597|consen 75 -----HLWVVTEYAVG-DLFTILEQDGK-LPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLA 147 (808)
T ss_pred -----eEEEEehhhhh-hHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhh
Confidence 12358999999 99999988775 555599999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
|.+..
T Consensus 148 r~m~~--------------------------------------------------------------------------- 152 (808)
T KOG0597|consen 148 RAMST--------------------------------------------------------------------------- 152 (808)
T ss_pred hhccc---------------------------------------------------------------------------
Confidence 87551
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCc---HH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS---ER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~---~~ 533 (1092)
...-+++.-|||.|||||++.+.+|+..+|+||||||||||+.|-++ ..
T Consensus 153 ----------------------------~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s 204 (808)
T KOG0597|consen 153 ----------------------------NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS 204 (808)
T ss_pred ----------------------------CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH
Confidence 01224467899999999999999999999999999999999987443 33
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
-......++.....||. ..++.+..|+..+|.+||.+|.+..++++|||..+.
T Consensus 205 i~~Lv~~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 205 ITQLVKSILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred HHHHHHHHhcCCCCCcc--cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 33333445555555555 558999999999999999999999999999998764
No 44
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.98 E-value=4.5e-32 Score=298.61 Aligned_cols=290 Identities=16% Similarity=0.232 Sum_probs=245.6
Q ss_pred eeecCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCC
Q 001366 773 GEFNNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG 851 (1092)
Q Consensus 773 ~~l~~h~~~V~sl~fsp-dg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dg 851 (1092)
..+.+|...|+++.|.| .+.+|++||.|++|+||++.. +..+....++|..+|.+++|+++ +..++|+|+|+
T Consensus 208 ~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~------~~~~lrtf~gH~k~Vrd~~~s~~-g~~fLS~sfD~ 280 (503)
T KOG0282|consen 208 HNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYD------DRRCLRTFKGHRKPVRDASFNNC-GTSFLSASFDR 280 (503)
T ss_pred eeccCCccccchhhhccceeeEEEecCCCceEEEEEEec------Ccceehhhhcchhhhhhhhcccc-CCeeeeeecce
Confidence 45789999999999999 899999999999999999875 24555677899999999999998 89999999999
Q ss_pred cEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEE
Q 001366 852 VVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLA 930 (1092)
Q Consensus 852 tV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~la 930 (1092)
.|++||+++|+++..|. -...++|+.|+|++.+.+++|+.|+.|+.||+++++.++.+. |-+.|..+.|-+++. .++
T Consensus 281 ~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~-rFi 358 (503)
T KOG0282|consen 281 FLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGR-RFI 358 (503)
T ss_pred eeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCc-eEe
Confidence 99999999999999986 355689999999766999999999999999999999999887 568899999999996 899
Q ss_pred EEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCe
Q 001366 931 FGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEK 1009 (1092)
Q Consensus 931 tgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V 1009 (1092)
+.+.|+.++||+.+..-........+.....++..+ ++++++.-+.|+.|.++.+...- .......+.||...-
T Consensus 359 ssSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~-----r~nkkK~feGh~vaG 433 (503)
T KOG0282|consen 359 SSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPF-----RLNKKKRFEGHSVAG 433 (503)
T ss_pred eeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEeccccc-----ccCHhhhhcceeccC
Confidence 999999999999987654333333444456677776 67789999999999999976321 223345677886654
Q ss_pred E--EEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCC-CCEEEEEecCCeE
Q 001366 1010 N--FVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRR-SDMVVAANSSGCI 1086 (1092)
Q Consensus 1010 ~--~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd-~~~Lasgs~DG~V 1086 (1092)
+ .|.|||||++|++|+.||.+.+||..+.+.+... ..|++.|..+.|+|. ...||||+.||.|
T Consensus 434 ys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~l--------------kah~~~ci~v~wHP~e~Skvat~~w~G~I 499 (503)
T KOG0282|consen 434 YSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKL--------------KAHDQPCIGVDWHPVEPSKVATCGWDGLI 499 (503)
T ss_pred ceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhcc--------------ccCCcceEEEEecCCCcceeEecccCcee
Confidence 4 4689999999999999999999998877766544 467889999999995 5789999999999
Q ss_pred EEEE
Q 001366 1087 KVLQ 1090 (1092)
Q Consensus 1087 ~vW~ 1090 (1092)
++|+
T Consensus 500 kiwd 503 (503)
T KOG0282|consen 500 KIWD 503 (503)
T ss_pred EecC
Confidence 9996
No 45
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.98 E-value=1.9e-30 Score=309.07 Aligned_cols=285 Identities=25% Similarity=0.392 Sum_probs=245.1
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEE
Q 001366 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLW 856 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IW 856 (1092)
.|...|+++.|+++|+++++++.|+.+++|+...... .......+|...|.+++|+|+ +.++++++.|++|+||
T Consensus 157 ~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~-----~~~~~l~~h~~~v~~~~fs~d-~~~l~s~s~D~tiriw 230 (456)
T KOG0266|consen 157 HECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS-----NLLRELSGHTRGVSDVAFSPD-GSYLLSGSDDKTLRIW 230 (456)
T ss_pred cccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc-----hhhccccccccceeeeEECCC-CcEEEEecCCceEEEe
Confidence 4578999999999999999999999999999854210 112223679999999999998 8899999999999999
Q ss_pred EC-CCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEEC
Q 001366 857 DA-CTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSA 934 (1092)
Q Consensus 857 D~-~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~ 934 (1092)
|+ ..+.+++++.+|...|++++|+| .++++++|+.|++|+|||+++++++..+. |...|++++|++++. +|++++.
T Consensus 231 d~~~~~~~~~~l~gH~~~v~~~~f~p-~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~-~l~s~s~ 308 (456)
T KOG0266|consen 231 DLKDDGRNLKTLKGHSTYVTSVAFSP-DGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGN-LLVSASY 308 (456)
T ss_pred eccCCCeEEEEecCCCCceEEEEecC-CCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCC-EEEEcCC
Confidence 99 55689999999999999999999 66999999999999999999999999998 677999999999995 8999999
Q ss_pred CCeEEEEEcCCCCc-ceEEecCCCCC--eEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCe-
Q 001366 935 DYRTYCYDLRNARA-PWCVLAGHEKA--VSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEK- 1009 (1092)
Q Consensus 935 Dg~I~vwDlr~~~~-~~~~l~~H~~~--V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V- 1009 (1092)
|+.|++||+.++.. +...+.++... ++++.|+ ++.++++++.|+++++||+. ...+...+.+|.+.+
T Consensus 309 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~--------~~~~~~~~~~~~~~~~ 380 (456)
T KOG0266|consen 309 DGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLR--------SGKSVGTYTGHSNLVR 380 (456)
T ss_pred CccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEcc--------CCcceeeecccCCcce
Confidence 99999999998874 24566666555 9999998 78899999999999999999 456678888888854
Q ss_pred --EEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCC-CCCEEEEEEeCCCCEEEEEe--cCC
Q 001366 1010 --NFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDN-GLFVSSVCWRRRSDMVVAAN--SSG 1084 (1092)
Q Consensus 1010 --~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h-~~~V~sva~spd~~~Lasgs--~DG 1084 (1092)
.+...++.+.++++|+.|+.|++|+..++..+... .+| ...|..++|+|..+++++++ .|+
T Consensus 381 ~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l--------------~~h~~~~~~~~~~~~~~~~~~s~s~~~d~ 446 (456)
T KOG0266|consen 381 CIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRL--------------EGHSKAAVSDLSSHPTENLIASSSFEGDG 446 (456)
T ss_pred eEecccccCCCCeEEEEeCCceEEEEeCCccchhhhh--------------cCCCCCceeccccCCCcCeeeecCcCCCc
Confidence 33455778999999999999999999876655543 456 77899999999999999998 789
Q ss_pred eEEEEEc
Q 001366 1085 CIKVLQM 1091 (1092)
Q Consensus 1085 ~V~vW~l 1091 (1092)
.|++|..
T Consensus 447 ~~~~w~~ 453 (456)
T KOG0266|consen 447 LIRLWKY 453 (456)
T ss_pred eEEEecC
Confidence 9999963
No 46
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.98 E-value=6.3e-33 Score=312.49 Aligned_cols=302 Identities=14% Similarity=0.112 Sum_probs=198.2
Q ss_pred CchhHHHhhh--ccccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccCCCCCCCccccceecCC
Q 001366 210 GFSEFFVKTT--LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNG 285 (1092)
Q Consensus 210 ~f~~~~~~~~--~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (1092)
+-..|.+.+. .||.|-||.++..+ +++..|-|+.--..+. .+..--.++..+|....+|.+|+++-+.....
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~----Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~ 214 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKD----TGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE 214 (550)
T ss_pred CcccchhheeeccccceeEEEEEEcc----CCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC
Confidence 3344555544 34789999998844 5566666654222221 12222334445666778999999888888777
Q ss_pred CCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC
Q 001366 286 SLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS 365 (1092)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~ 365 (1092)
.+++ +|||++||++..+|...+. +.+..++.|+.+++.|++.+|+.|+|||||||+|+||+..
T Consensus 215 ~LYL----------------iMEylPGGD~mTLL~~~~~-L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~ 277 (550)
T KOG0605|consen 215 YLYL----------------IMEYLPGGDMMTLLMRKDT-LTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAK 277 (550)
T ss_pred eeEE----------------EEEecCCccHHHHHHhcCc-CchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCC
Confidence 7774 8999999999999988765 5566999999999999999999999999999999999999
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
|++||+||||+..+......+.-. .++.... .+.+ . .
T Consensus 278 GHiKLSDFGLs~gl~~~~~~~~~~-~~~~~~~------------------~~~~---------------------~---~ 314 (550)
T KOG0605|consen 278 GHIKLSDFGLSTGLDKKHRIESYR-LDEQMQI------------------NLSE---------------------A---K 314 (550)
T ss_pred CCEeeccccccchhhhhhhhhhhc-chhhhhh------------------hhcc---------------------C---C
Confidence 999999999996554211100000 0000000 0000 0 0
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL 525 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~el 525 (1092)
..+|.....-..+ ++.....-........-..+.+|||-|||||++.+..|+..+|+||||||+|||
T Consensus 315 ~~~~~~~~~~~~~-------------~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEm 381 (550)
T KOG0605|consen 315 PSDFPKFNTPRST-------------MSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEM 381 (550)
T ss_pred Cccccccccccch-------------hhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHH
Confidence 0111100000000 000000000001111122368999999999999999999999999999999999
Q ss_pred cCC---CCcHHHHHHHHHhcccc--CCCCCCCCCChhHHHHHHhccccCCCCCC---CHHHHhhhhhhhhhh
Q 001366 526 FGR---FDSERALAAAMSDLRDR--ILPPSFLSENPKEAGFCLWQLHPEPLSRP---TTREILQSEVTNEFQ 589 (1092)
Q Consensus 526 l~~---f~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~li~~lL~~dP~~Rp---sa~eiL~~~~~~~~~ 589 (1092)
|.| |.++.....+-..+.-+ ...|.-...+++..+||.+||+ ||.+|. ++.||.+||||....
T Consensus 382 LvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 382 LVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD 452 (550)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence 986 44444444444333322 2234444557889999999999 999996 589999999998764
No 47
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.98 E-value=3.4e-32 Score=310.36 Aligned_cols=241 Identities=21% Similarity=0.208 Sum_probs=188.1
Q ss_pred hhccccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCC-CCCCCccCCC
Q 001366 218 TTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNG-SLDLGARTGV 295 (1092)
Q Consensus 218 ~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 295 (1092)
...++.|.||+|.... ...+++|++...+-. .....-.++..++.+.+||||+.++.+..... ..
T Consensus 49 iG~G~~g~V~~~~~~g-----~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~-------- 115 (362)
T KOG0192|consen 49 LGSGSFGTVYKGKWRG-----TDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSL-------- 115 (362)
T ss_pred cccCCceeEEEEEeCC-----ceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCce--------
Confidence 4466899999999843 222677666443322 22345566777888899999998665544222 11
Q ss_pred CCccccCCCcccccCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhhcC-ccccCCCCCCeEEccCC-cEEEec
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQG-VTFLDLKPSSFKLLQSN-QVKYIG 372 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~qil~~l~~lHs~g-IvHrDLKP~Nill~~~~-~vkl~D 372 (1092)
.++|||++||+|+++|.. ....++...++.++.||+.|++|||+++ ||||||||+|||++... ++||+|
T Consensus 116 --------~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~D 187 (362)
T KOG0192|consen 116 --------CIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIAD 187 (362)
T ss_pred --------EEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECC
Confidence 248999999999999977 4678999899999999999999999999 99999999999999997 999999
Q ss_pred ccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCC
Q 001366 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1092)
Q Consensus 373 fg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 452 (1092)
||+++......
T Consensus 188 FGlsr~~~~~~--------------------------------------------------------------------- 198 (362)
T KOG0192|consen 188 FGLSREKVISK--------------------------------------------------------------------- 198 (362)
T ss_pred Cccceeecccc---------------------------------------------------------------------
Confidence 99998754100
Q ss_pred CCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc--CCCCCccccchhhhHHHHHHcCC--
Q 001366 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS--GGVCTTSSNIYSLGVLFFELFGR-- 528 (1092)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~--~~~~t~~sDIwSLGvll~ell~~-- 528 (1092)
...+...||..|||||++. ...|+.|+||||+|++||||+|+
T Consensus 199 ----------------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~ 244 (362)
T KOG0192|consen 199 ----------------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEI 244 (362)
T ss_pred ----------------------------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCC
Confidence 1122467999999999999 56899999999999999999985
Q ss_pred -CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 -FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 -f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|..................|+......+.+..|+.+||+.||..||++.+|+..
T Consensus 245 Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~ 299 (362)
T KOG0192|consen 245 PFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSR 299 (362)
T ss_pred CCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHH
Confidence 666666444444444555555455578999999999999999999999998763
No 48
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.98 E-value=1e-30 Score=293.72 Aligned_cols=282 Identities=22% Similarity=0.345 Sum_probs=246.2
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001366 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1092)
Q Consensus 775 l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~ 854 (1092)
+..++..|.++.|||....++++-.+|.|.||+.++.. .........-+|.+..|-.. .+++++||.|..|+
T Consensus 9 ~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqt-------mVksfeV~~~PvRa~kfiaR-knWiv~GsDD~~Ir 80 (794)
T KOG0276|consen 9 FQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQT-------MVKSFEVSEVPVRAAKFIAR-KNWIVTGSDDMQIR 80 (794)
T ss_pred hhccCCceeeeecCCCCceEEEeeecCeeEEEecccce-------eeeeeeecccchhhheeeec-cceEEEecCCceEE
Confidence 45689999999999999999999999999999998621 11122235678888899887 89999999999999
Q ss_pred EEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCC-ceeeeEe-cCCceEEEEEccCCCeEEEEE
Q 001366 855 LWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEK-NSLATIK-NIANVCCVQFSAHSSHLLAFG 932 (1092)
Q Consensus 855 IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~-~~l~~l~-~~~~V~sl~fsp~~~~~latg 932 (1092)
||+..|++.+..|..|.+-|.+++.+|. .-.++|+|+|-+|++||-+.+ .|.+++. |..-|.+++|+|.+.+.||++
T Consensus 81 Vfnynt~ekV~~FeAH~DyIR~iavHPt-~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~ 159 (794)
T KOG0276|consen 81 VFNYNTGEKVKTFEAHSDYIRSIAVHPT-LPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASA 159 (794)
T ss_pred EEecccceeeEEeeccccceeeeeecCC-CCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeee
Confidence 9999999999999999999999999994 457899999999999999865 5677887 556799999999998999999
Q ss_pred ECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCC---EEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCe
Q 001366 933 SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSG---TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEK 1009 (1092)
Q Consensus 933 s~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~---~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V 1009 (1092)
+-|++|+||.+.+.. +..++.+|...|.||.|.+++ +|+||+.|.+|+|||.. +..|++++.||++.|
T Consensus 160 sLDrTVKVWslgs~~-~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQ--------tk~CV~TLeGHt~Nv 230 (794)
T KOG0276|consen 160 SLDRTVKVWSLGSPH-PNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQ--------TKSCVQTLEGHTNNV 230 (794)
T ss_pred eccccEEEEEcCCCC-CceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecc--------hHHHHHHhhcccccc
Confidence 999999999998765 578999999999999998665 99999999999999998 578999999999999
Q ss_pred EEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEE
Q 001366 1010 NFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKV 1088 (1092)
Q Consensus 1010 ~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~v 1088 (1092)
+++.|+|.-.+|++||+||+|+||+..+-+...+..+| ...|++|+-.+.+..++.|...|.|.|
T Consensus 231 s~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~g--------------leRvW~I~~~k~~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 231 SFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYG--------------LERVWCIAAHKGDGKIAVGFDEGSVTV 295 (794)
T ss_pred eEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcC--------------CceEEEEeecCCCCeEEEeccCCcEEE
Confidence 99999999999999999999999998776655544432 357999999898888888888887643
No 49
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.98 E-value=8.8e-33 Score=299.74 Aligned_cols=247 Identities=17% Similarity=0.160 Sum_probs=186.8
Q ss_pred ccccceeeeCCCCCccccccccccc-cccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDT-KAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.|.+|+||+|.... .++.+|. |+... -..+.++...++...||||+.++-........+ ..
T Consensus 34 ~GsFg~Vyq~~~~e----~~~~vAIKKv~~d------~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d--------~~ 95 (364)
T KOG0658|consen 34 SGSFGVVYQAKLRE----TEEEVAIKKVLQD------KRYKNRELQIMRKLDHPNIVRLLYFFSSSTESD--------EV 95 (364)
T ss_pred ecccceEEEEEEcC----CCceeEEEEecCC------CCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCc--------hh
Confidence 45689999999843 2455555 33322 235666777788999999998765544332221 11
Q ss_pred cccCCCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC-CcEEEeccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-NQVKYIGPI 374 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~-~~vkl~Dfg 374 (1092)
| -+.+|||++ -||.++++. .+..++..+++-+..||++||.|||+.||+||||||.|+|++++ |.+||+|||
T Consensus 96 ~---lnlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFG 171 (364)
T KOG0658|consen 96 Y---LNLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFG 171 (364)
T ss_pred H---HHHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCC
Confidence 1 234677765 589999974 35567777999999999999999999999999999999999977 999999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
.|+.+...
T Consensus 172 SAK~L~~~------------------------------------------------------------------------ 179 (364)
T KOG0658|consen 172 SAKVLVKG------------------------------------------------------------------------ 179 (364)
T ss_pred cceeeccC------------------------------------------------------------------------
Confidence 99886510
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CC
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FD 530 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~ 530 (1092)
....+...|+.|+|||++.| ..||.+.||||.||+++||+-| |+
T Consensus 180 --------------------------------epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFp 227 (364)
T KOG0658|consen 180 --------------------------------EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFP 227 (364)
T ss_pred --------------------------------CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccC
Confidence 00016678999999999999 6799999999999999999976 88
Q ss_pred cHHHHHHHHHhccccC------------------CC-----C----CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 531 SERALAAAMSDLRDRI------------------LP-----P----SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 531 ~~~~~~~~~~~~~~~~------------------~p-----~----~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
+++...++..+++--- +| + .+...+|+..+|+.++|.++|.+|.++.|+|.||
T Consensus 228 G~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~ 307 (364)
T KOG0658|consen 228 GDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHP 307 (364)
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcch
Confidence 8766666543332211 11 0 1345678899999999999999999999999999
Q ss_pred hhhhhhccc
Q 001366 584 VTNEFQEVC 592 (1092)
Q Consensus 584 ~~~~~~~~~ 592 (1092)
||++.++..
T Consensus 308 fFdelr~~~ 316 (364)
T KOG0658|consen 308 FFDELRDPN 316 (364)
T ss_pred hhHHhhCcC
Confidence 999987763
No 50
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.98 E-value=4.5e-32 Score=276.83 Aligned_cols=209 Identities=20% Similarity=0.174 Sum_probs=171.2
Q ss_pred hhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHH
Q 001366 259 KAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (1092)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qi 338 (1092)
--++..+.+..+||||+.+.+.-.....+++ +.++++|++|..-|-.+ ...++..+-++++||
T Consensus 57 l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl----------------vFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQi 119 (355)
T KOG0033|consen 57 LEREARICRKLQHPNIVRLHDSIQEESFHYL----------------VFDLVTGGELFEDIVAR-EFYSEADASHCIQQI 119 (355)
T ss_pred HHHHHHHHHhcCCCcEeehhhhhcccceeEE----------------EEecccchHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 3455666788899999998877666666663 78899999999877544 467888999999999
Q ss_pred HHHHHHhhhcCccccCCCCCCeEEccC---CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhc
Q 001366 339 VALVDYHHTQGVTFLDLKPSSFKLLQS---NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (1092)
Q Consensus 339 l~~l~~lHs~gIvHrDLKP~Nill~~~---~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 415 (1092)
|++|+|||.+||||||+||+|+||-.. -.+|++|||++.++.+ +
T Consensus 120 Leal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~-g-------------------------------- 166 (355)
T KOG0033|consen 120 LEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND-G-------------------------------- 166 (355)
T ss_pred HHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC-c--------------------------------
Confidence 999999999999999999999999643 4599999999988651 0
Q ss_pred ccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCccccccccccccccccccc
Q 001366 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (1092)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 495 (1092)
......+||
T Consensus 167 -----------------------------------------------------------------------~~~~G~~Gt 175 (355)
T KOG0033|consen 167 -----------------------------------------------------------------------EAWHGFAGT 175 (355)
T ss_pred -----------------------------------------------------------------------cccccccCC
Confidence 001157899
Q ss_pred ccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHHHH--HHhccccCCCCCCCCCChhHHHHHHhccccCC
Q 001366 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAA--MSDLRDRILPPSFLSENPKEAGFCLWQLHPEP 570 (1092)
Q Consensus 496 ~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP 570 (1092)
|.|||||++...+|+.++|||+.|||||-||.| |.++...... +..-.....+|.+...+|+.++|+.+||..||
T Consensus 176 P~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP 255 (355)
T KOG0033|consen 176 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNP 255 (355)
T ss_pred CcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccCh
Confidence 999999999999999999999999999999985 5543333333 33333345567899999999999999999999
Q ss_pred CCCCCHHHHhhhhhhhhh
Q 001366 571 LSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 571 ~~Rpsa~eiL~~~~~~~~ 588 (1092)
.+|+|+.|.|.|||+++.
T Consensus 256 ~kRIta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 256 KKRITADEALKHPWICNR 273 (355)
T ss_pred hhhccHHHHhCCchhcch
Confidence 999999999999999874
No 51
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.98 E-value=5.3e-31 Score=305.87 Aligned_cols=238 Identities=22% Similarity=0.392 Sum_probs=216.9
Q ss_pred CCCeEEEEEecCCCCEEEEEECCCcEEEEECCC-------------------------------CceEEEeeccCccEEE
Q 001366 828 RSKLSCVCWNNYIKNYLASADYDGVVKLWDACT-------------------------------GQTVSHYIEHEKRAWS 876 (1092)
Q Consensus 828 ~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~t-------------------------------g~~i~~l~~h~~~V~s 876 (1092)
...++|..|+++ ..+||.|-.|..|++|.+.. +...+++.+|+++|.+
T Consensus 378 ~~~v~ca~fSdd-ssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg 456 (707)
T KOG0263|consen 378 YQGVTCAEFSDD-SSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYG 456 (707)
T ss_pred CCcceeEeecCC-cchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceee
Confidence 567899999998 77999999999999998762 1134567899999999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecC
Q 001366 877 VDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAG 955 (1092)
Q Consensus 877 v~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~ 955 (1092)
+.|+| +.++|+|||.|++||+|.+.+..++..++ |..+|+.++|+|.| ++||+++.|++.++|..... .+...+.+
T Consensus 457 ~sFsP-d~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~G-yYFatas~D~tArLWs~d~~-~PlRifag 533 (707)
T KOG0263|consen 457 CSFSP-DRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRG-YYFATASHDQTARLWSTDHN-KPLRIFAG 533 (707)
T ss_pred eeecc-cccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCc-eEEEecCCCceeeeeecccC-Cchhhhcc
Confidence 99999 88999999999999999999999999888 56799999999998 79999999999999998875 46789999
Q ss_pred CCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEe
Q 001366 956 HEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYH 1034 (1092)
Q Consensus 956 H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd 1034 (1092)
|.+.|.|++|+ +..++++||.|.+|++||+. ++..++.|.||..+|.+++|||+|++||+|+.|+.|.|||
T Consensus 534 hlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~--------~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWD 605 (707)
T KOG0263|consen 534 HLSDVDCVSFHPNSNYVATGSSDRTVRLWDVS--------TGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWD 605 (707)
T ss_pred cccccceEEECCcccccccCCCCceEEEEEcC--------CCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEE
Confidence 99999999999 66799999999999999998 5677999999999999999999999999999999999999
Q ss_pred CCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1035 RSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1035 ~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
+..+.++..+ .+|.+.|.+|.|+.+|..||+||.|.+|++||+
T Consensus 606 l~~~~~v~~l--------------~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~ 648 (707)
T KOG0263|consen 606 LANGSLVKQL--------------KGHTGTIYSLSFSRDGNVLASGGADNSVRLWDL 648 (707)
T ss_pred cCCCcchhhh--------------hcccCceeEEEEecCCCEEEecCCCCeEEEEEc
Confidence 9998887755 367889999999999999999999999999997
No 52
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=3e-30 Score=295.97 Aligned_cols=306 Identities=21% Similarity=0.281 Sum_probs=257.6
Q ss_pred cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeee
Q 001366 747 RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISF-DRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM 825 (1092)
Q Consensus 747 ~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~f-spdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~ 825 (1092)
.+....|..+-+.+.....+.. .+.+..+.|.++.| .|+.++||+++..+.+++|+..+ .......
T Consensus 296 ~l~vtaeQnl~l~d~~~l~i~k-----~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~--------~~c~ii~ 362 (775)
T KOG0319|consen 296 LLLVTAEQNLFLYDEDELTIVK-----QIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPT--------SYCQIIP 362 (775)
T ss_pred eEEEEccceEEEEEccccEEeh-----hhcCCchhheeeeecCCccceEEEEeCCCceEEEecCC--------CceEEEe
Confidence 4455666666666655544433 34466778888876 57889999999999999998765 2223677
Q ss_pred cCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCc----eEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEec
Q 001366 826 SNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ----TVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNI 901 (1092)
Q Consensus 826 ~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~----~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl 901 (1092)
+|+..|.++.-..+ +.+|+|||.|++|++|.++.+. ++....+|+..|.+|+++.....+|+++|.|+++++|++
T Consensus 363 GH~e~vlSL~~~~~-g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l 441 (775)
T KOG0319|consen 363 GHTEAVLSLDVWSS-GDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDL 441 (775)
T ss_pred Cchhheeeeeeccc-CcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecC
Confidence 89999999993333 6899999999999999875442 566778999999999998867789999999999999999
Q ss_pred CCCce---eeeE-------ecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCE
Q 001366 902 NEKNS---LATI-------KNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGT 970 (1092)
Q Consensus 902 ~~~~~---l~~l-------~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~ 970 (1092)
...+. ...+ .|...|+||+.+|+.. ++||||.|.+.++|++.+.. ...++.||+..|.+|.|+ .++.
T Consensus 442 ~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndk-LiAT~SqDktaKiW~le~~~-l~~vLsGH~RGvw~V~Fs~~dq~ 519 (775)
T KOG0319|consen 442 PKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDK-LIATGSQDKTAKIWDLEQLR-LLGVLSGHTRGVWCVSFSKNDQL 519 (775)
T ss_pred CCcccccccceehhhHHHHhhcccccceEecCCCc-eEEecccccceeeecccCce-EEEEeeCCccceEEEEeccccce
Confidence 76221 1112 2778899999999985 99999999999999999554 578999999999999999 6678
Q ss_pred EEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccC
Q 001366 971 LVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSID 1050 (1092)
Q Consensus 971 L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~ 1050 (1092)
++|+|.|++|+||.+. +..|+.++.||+..|..+.|-.+|..|++++.||.|++|++.++.++.++
T Consensus 520 laT~SgD~TvKIW~is--------~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tl------ 585 (775)
T KOG0319|consen 520 LATCSGDKTVKIWSIS--------TFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTL------ 585 (775)
T ss_pred eEeccCCceEEEEEec--------cceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhh------
Confidence 9999999999999998 67899999999999999999999999999999999999999988877654
Q ss_pred CCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1051 PISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1051 ~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
+.|+..|++++-+|+..+++||+.||.|.+|.
T Consensus 586 --------D~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 586 --------DAHNDRVWALSVSPLLDMFVTGGGDGRIIFWK 617 (775)
T ss_pred --------hhccceeEEEeecCccceeEecCCCeEEEEee
Confidence 68999999999999999999999999999996
No 53
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.97 E-value=9.1e-32 Score=290.25 Aligned_cols=272 Identities=19% Similarity=0.272 Sum_probs=233.0
Q ss_pred cCCCC--cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccc
Q 001366 742 QNPTD--RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVY 819 (1092)
Q Consensus 742 ~~~~~--~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~ 819 (1092)
|.|++ .+.++..|...+|....|...- .+..|.++|+++.|+++|.++++|..+|.||+|+.+-.. +
T Consensus 104 WtPeGRRLltgs~SGEFtLWNg~~fnFEt-----ilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn---V--- 172 (464)
T KOG0284|consen 104 WTPEGRRLLTGSQSGEFTLWNGTSFNFET-----ILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN---V--- 172 (464)
T ss_pred EcCCCceeEeecccccEEEecCceeeHHH-----HhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhh---h---
Confidence 66663 4688888999999875443322 245899999999999999999999999999999976411 1
Q ss_pred cceeeec-CCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEE
Q 001366 820 YPAVEMS-NRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKL 898 (1092)
Q Consensus 820 ~~~~~~~-h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~i 898 (1092)
..... |...|.+++|+|. ...++|||.||+|+|||....+.-..+.+|.-.|.+++|+| ...++||||.|..|++
T Consensus 173 --k~~~ahh~eaIRdlafSpn-DskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP-~kgLiasgskDnlVKl 248 (464)
T KOG0284|consen 173 --KIIQAHHAEAIRDLAFSPN-DSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHP-TKGLIASGSKDNLVKL 248 (464)
T ss_pred --HHhhHhhhhhhheeccCCC-CceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCC-ccceeEEccCCceeEe
Confidence 11222 4589999999996 88999999999999999998888888899999999999999 6779999999999999
Q ss_pred EecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc--CCCEEEEEE
Q 001366 899 WNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL--DSGTLVTAS 975 (1092)
Q Consensus 899 WDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs--~~~~L~Sgs 975 (1092)
||.+++.|+.++. |...|..+.|+|++ ++|++++.|..+++||+|+.+ .+.++++|+..|+++.|+ ..+.|.+|+
T Consensus 249 WDprSg~cl~tlh~HKntVl~~~f~~n~-N~Llt~skD~~~kv~DiR~mk-El~~~r~Hkkdv~~~~WhP~~~~lftsgg 326 (464)
T KOG0284|consen 249 WDPRSGSCLATLHGHKNTVLAVKFNPNG-NWLLTGSKDQSCKVFDIRTMK-ELFTYRGHKKDVTSLTWHPLNESLFTSGG 326 (464)
T ss_pred ecCCCcchhhhhhhccceEEEEEEcCCC-CeeEEccCCceEEEEehhHhH-HHHHhhcchhhheeeccccccccceeecc
Confidence 9999999999988 67889999999999 699999999999999999654 467889999999999998 667899999
Q ss_pred CCCeEEEEEcCCCCCCCCCCCceeEE-EcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCC
Q 001366 976 TDNKLKLWDLKRTSHTGPSTNACSLT-FSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLP 1038 (1092)
Q Consensus 976 ~Dg~I~vWDl~~~~~~~~~~~~~~~~-l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~ 1038 (1092)
.||.|..|.+.... ++.. -.+|...|++++|+|-|-+||+|+.|.++++|....+
T Consensus 327 ~Dgsvvh~~v~~~~--------p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~rp 382 (464)
T KOG0284|consen 327 SDGSVVHWVVGLEE--------PLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRNRP 382 (464)
T ss_pred CCCceEEEeccccc--------cccCCCcccccceeeeeccccceeEeecCCCcceeeeccCCC
Confidence 99999999997322 2222 2479999999999999999999999999999976543
No 54
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.1e-32 Score=296.12 Aligned_cols=247 Identities=15% Similarity=0.138 Sum_probs=192.2
Q ss_pred ceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccccCC
Q 001366 224 GIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGG 303 (1092)
Q Consensus 224 Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (1092)
++||+|... -+++.+++|+.--+.-..+...-.++...+....||||+......+++..+.
T Consensus 40 a~V~~A~c~----p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LW--------------- 100 (516)
T KOG0582|consen 40 AVVYLARCI----PTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELW--------------- 100 (516)
T ss_pred eEeeeeeec----ccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeE---------------
Confidence 689999873 2367777777644333344455666777788889999999888888777666
Q ss_pred CcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccccc
Q 001366 304 LRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLES 382 (1092)
Q Consensus 304 ~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~ 382 (1092)
++|.|+.+|++.+.|+..- .-+++..+..|++++|+||+|||.+|-||||||++||||+.+|.|||+|||.+-.+.+.
T Consensus 101 -vVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 101 -VVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred -EeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 4899999999999997642 24888889999999999999999999999999999999999999999999987665521
Q ss_pred ccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccccc
Q 001366 383 ASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHH 462 (1092)
Q Consensus 383 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 462 (1092)
+.
T Consensus 180 G~------------------------------------------------------------------------------ 181 (516)
T KOG0582|consen 180 GD------------------------------------------------------------------------------ 181 (516)
T ss_pred Cc------------------------------------------------------------------------------
Confidence 10
Q ss_pred ccCCCCCccCCCCCcccccccccccccccccccccccCcccccC--CCCCccccchhhhHHHHHHcCC---CCcHHHHHH
Q 001366 463 TNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLFFELFGR---FDSERALAA 537 (1092)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~--~~~t~~sDIwSLGvll~ell~~---f~~~~~~~~ 537 (1092)
.....++..+||++|||||++.. ..|++|+||||||++..||.+| |.--.....
T Consensus 182 ---------------------R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv 240 (516)
T KOG0582|consen 182 ---------------------RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV 240 (516)
T ss_pred ---------------------eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH
Confidence 01112247899999999999765 6699999999999999999986 443344555
Q ss_pred HHHhccccCCCCC--------CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 538 AMSDLRDRILPPS--------FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 538 ~~~~~~~~~~p~~--------~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
++..+...+.-+. ....+..++.|+..||.+||.+||||.++|.|+||...+
T Consensus 241 Ll~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k 300 (516)
T KOG0582|consen 241 LLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAK 300 (516)
T ss_pred HHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhcc
Confidence 5666665442111 122335688999999999999999999999999998754
No 55
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.4e-31 Score=292.67 Aligned_cols=312 Identities=13% Similarity=0.143 Sum_probs=208.9
Q ss_pred CCchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecC
Q 001366 209 SGFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSN 284 (1092)
Q Consensus 209 ~~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (1092)
=+++-|.+.+.|+ -.|.||.....+. ...-|.||.--... .....++..+..+|..+.||-+++++.....+
T Consensus 74 l~l~~f~llk~LG~GdiG~VyL~~l~~t----~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~ 149 (459)
T KOG0610|consen 74 LGLRHFRLLKRLGCGDIGTVYLVELRGT----NCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETD 149 (459)
T ss_pred cCHHHHHHHHHcCCCCceeEEEEEecCC----CceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecc
Confidence 3777888888887 3799999998652 12222333211111 12234455556678889999999988776655
Q ss_pred CCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc
Q 001366 285 GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL 363 (1092)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~ 363 (1092)
...+ .+||||.||+|.-++++ .+..+++..++.|+..++.||+|||-+|||.|||||+||||-
T Consensus 150 ~~~c----------------l~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvr 213 (459)
T KOG0610|consen 150 KYSC----------------LVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVR 213 (459)
T ss_pred ceeE----------------EEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEe
Confidence 5554 28999999999999854 556788889999999999999999999999999999999999
Q ss_pred cCCcEEEecccccccccccccC-CCCCCc--hhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccc
Q 001366 364 QSNQVKYIGPIIQKETLESASL-DIPHSE--NYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIET 440 (1092)
Q Consensus 364 ~~~~vkl~Dfg~~~~~~~~~~~-~~~~~~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1092)
++|+|.|+||-|+....-..+. ...... ...-+.+..+...+........++.
T Consensus 214 edGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~------------------------ 269 (459)
T KOG0610|consen 214 EDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKR------------------------ 269 (459)
T ss_pred cCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhcccccc------------------------
Confidence 9999999999998776321110 000000 0000000000000000000000000
Q ss_pred cCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhH
Q 001366 441 ANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGV 520 (1092)
Q Consensus 441 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGv 520 (1092)
.+ ++.+..++.... . +......-.+++||-.|.|||++.|...+.++|+|+|||
T Consensus 270 ---~k-~~~~~~~~~p~~-------------------~---aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGI 323 (459)
T KOG0610|consen 270 ---KK-KDESASRSLPEL-------------------V---AEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGI 323 (459)
T ss_pred ---cc-ccccccccchhh-------------------h---cCCCCccccccccccccccceeeecCCCCchhhHHHHHH
Confidence 00 111111000000 0 000011123789999999999999999999999999999
Q ss_pred HHHHHcC---CCCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC----HHHHhhhhhhhhhhc
Q 001366 521 LFFELFG---RFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT----TREILQSEVTNEFQE 590 (1092)
Q Consensus 521 ll~ell~---~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps----a~eiL~~~~~~~~~~ 590 (1092)
+|||||. ||.+..........+....-.|..+..+-.+++||.+||.+||++|.. |.||.+||||.+.+=
T Consensus 324 flYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnW 400 (459)
T KOG0610|consen 324 FLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNW 400 (459)
T ss_pred HHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCCh
Confidence 9999995 588887777777777665544555566688999999999999999998 999999999988643
No 56
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.97 E-value=7.1e-32 Score=303.20 Aligned_cols=248 Identities=14% Similarity=0.186 Sum_probs=178.0
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ ++.|+||++... ..+..++.|+..............++..++...+|||++.+.+....+...+
T Consensus 7 y~~~~~lg~G~~g~Vy~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~--- 79 (288)
T cd07871 7 YVKLDKLGEGTYATVFKGRSK----LTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLT--- 79 (288)
T ss_pred ceEeeEEecCCCEEEEEEEEC----CCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE---
Confidence 4444443 478999999752 2345566655432222222334456777888899999998766543322222
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
.+|||+.| +|.+++...+..++...++.+++||+.||+|||++||+||||||+|||++.++.+|++
T Consensus 80 -------------lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~ 145 (288)
T cd07871 80 -------------LVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLA 145 (288)
T ss_pred -------------EEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEC
Confidence 37999986 9999998777777888999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++.....
T Consensus 146 DfG~~~~~~~~--------------------------------------------------------------------- 156 (288)
T cd07871 146 DFGLARAKSVP--------------------------------------------------------------------- 156 (288)
T ss_pred cCcceeeccCC---------------------------------------------------------------------
Confidence 99988653210
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC--
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR-- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~-- 528 (1092)
........||++|+|||.+.+ ..++.++|||||||++|||+++
T Consensus 157 ----------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~ 202 (288)
T cd07871 157 ----------------------------------TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRP 202 (288)
T ss_pred ----------------------------------CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCC
Confidence 000113467899999999876 5689999999999999999986
Q ss_pred -CCcHHHHHHHHHhcc--cc------------------CCCC--------CCCCCChhHHHHHHhccccCCCCCCCHHHH
Q 001366 529 -FDSERALAAAMSDLR--DR------------------ILPP--------SFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (1092)
Q Consensus 529 -f~~~~~~~~~~~~~~--~~------------------~~p~--------~~~~~~~~~~~li~~lL~~dP~~Rpsa~ei 579 (1092)
|.+............ .. .+|. .....++++.+|+.+||++||.+|||+.|+
T Consensus 203 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~ 282 (288)
T cd07871 203 MFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAA 282 (288)
T ss_pred CCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHH
Confidence 433322221111110 00 0010 112346778999999999999999999999
Q ss_pred hhhhhh
Q 001366 580 LQSEVT 585 (1092)
Q Consensus 580 L~~~~~ 585 (1092)
|+||||
T Consensus 283 l~hp~f 288 (288)
T cd07871 283 LRHSYF 288 (288)
T ss_pred hcCCCC
Confidence 999997
No 57
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=1.8e-30 Score=279.92 Aligned_cols=286 Identities=19% Similarity=0.335 Sum_probs=236.7
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.+..|.+.|.-+.|+++|+|||+|+.|.+..||++.... .........+|..+|..+.|+|| .++|++|+.|..+
T Consensus 219 il~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~----~~kl~~tlvgh~~~V~yi~wSPD-dryLlaCg~~e~~ 293 (519)
T KOG0293|consen 219 ILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDV----HFKLKKTLVGHSQPVSYIMWSPD-DRYLLACGFDEVL 293 (519)
T ss_pred hHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCc----ceeeeeeeecccCceEEEEECCC-CCeEEecCchHhe
Confidence 467899999999999999999999999999999986421 23344567789999999999999 8999999999999
Q ss_pred EEEECCCCceEEEee-ccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEec--CCceEEEEEccCCCeEEE
Q 001366 854 KLWDACTGQTVSHYI-EHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKN--IANVCCVQFSAHSSHLLA 930 (1092)
Q Consensus 854 ~IWD~~tg~~i~~l~-~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~--~~~V~sl~fsp~~~~~la 930 (1092)
++||+.+|.+...+. +|...+.+++|.| |+..+++|+.|+++..||+.. ..+..++. ...|.+++..+||. +++
T Consensus 294 ~lwDv~tgd~~~~y~~~~~~S~~sc~W~p-Dg~~~V~Gs~dr~i~~wdlDg-n~~~~W~gvr~~~v~dlait~Dgk-~vl 370 (519)
T KOG0293|consen 294 SLWDVDTGDLRHLYPSGLGFSVSSCAWCP-DGFRFVTGSPDRTIIMWDLDG-NILGNWEGVRDPKVHDLAITYDGK-YVL 370 (519)
T ss_pred eeccCCcchhhhhcccCcCCCcceeEEcc-CCceeEecCCCCcEEEecCCc-chhhcccccccceeEEEEEcCCCc-EEE
Confidence 999999999887775 3568899999999 999999999999999999984 44444442 35699999999997 666
Q ss_pred EEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCe
Q 001366 931 FGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEK 1009 (1092)
Q Consensus 931 tgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V 1009 (1092)
+.+.|..|++|+..+... .. +.....+|+++..+ ++.++++.=.+..|.+||+. ....++.+.||...-
T Consensus 371 ~v~~d~~i~l~~~e~~~d-r~-lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~--------e~~lv~kY~Ghkq~~ 440 (519)
T KOG0293|consen 371 LVTVDKKIRLYNREARVD-RG-LISEEQPITSFSISKDGKLALVNLQDQEIHLWDLE--------ENKLVRKYFGHKQGH 440 (519)
T ss_pred EEecccceeeechhhhhh-hc-cccccCceeEEEEcCCCcEEEEEcccCeeEEeecc--------hhhHHHHhhcccccc
Confidence 777999999999876432 11 22345689999999 66677777789999999998 356677888888765
Q ss_pred EEE--EEec-CCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeC-CCCEEEEEecCCe
Q 001366 1010 NFV--GLST-ADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRR-RSDMVVAANSSGC 1085 (1092)
Q Consensus 1010 ~~v--~~sp-dg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~sp-d~~~Lasgs~DG~ 1085 (1092)
.-+ +|-- +..+||+||+|+.|+||+..+++++... .||...|++|+|+| +-.++|+||.||+
T Consensus 441 fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~L--------------sGHs~~vNcVswNP~~p~m~ASasDDgt 506 (519)
T KOG0293|consen 441 FIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVL--------------SGHSKTVNCVSWNPADPEMFASASDDGT 506 (519)
T ss_pred eEEEeccCCCCcceEEecCCCceEEEEEccCCceeEee--------------cCCcceeeEEecCCCCHHHhhccCCCCe
Confidence 444 4443 3479999999999999999999988754 58889999999999 5678999999999
Q ss_pred EEEEEc
Q 001366 1086 IKVLQM 1091 (1092)
Q Consensus 1086 V~vW~l 1091 (1092)
||||-.
T Consensus 507 IRIWg~ 512 (519)
T KOG0293|consen 507 IRIWGP 512 (519)
T ss_pred EEEecC
Confidence 999964
No 58
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=8.5e-32 Score=290.64 Aligned_cols=247 Identities=22% Similarity=0.245 Sum_probs=189.7
Q ss_pred hHHHhhhcc-c-cceeeeCCCCCccccccccccccccccccC-chhh-HhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 213 EFFVKTTLK-G-KGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDA-ALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~~~~~-g-~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
.|.+.++|+ | .|.|-++... + .+..+++|-.--.-+ +.+. ..--++..++.+++||+|+..++..--..-.
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~---~-sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKI- 128 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEH---K-SGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKI- 128 (668)
T ss_pred HHHHHHHhcCCcccceeehhhc---c-CCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceE-
Confidence 577777775 3 5777777662 1 255666633222222 2222 2334566678899999999866654322111
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
-++|||..||.|+|||..++. +++.++++||+||++||.|||.++|+|||||-+||||+.+|++
T Consensus 129 ---------------vivMEYaS~GeLYDYiSer~~-LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~Ni 192 (668)
T KOG0611|consen 129 ---------------VIVMEYASGGELYDYISERGS-LSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNI 192 (668)
T ss_pred ---------------EEEEEecCCccHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCe
Confidence 138999999999999988876 6666999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||++..+.+
T Consensus 193 KIADFGLSNly~~------------------------------------------------------------------- 205 (668)
T KOG0611|consen 193 KIADFGLSNLYAD------------------------------------------------------------------- 205 (668)
T ss_pred eeeccchhhhhcc-------------------------------------------------------------------
Confidence 9999999876541
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC-CccccchhhhHHHHHHcC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-t~~sDIwSLGvll~ell~ 527 (1092)
...++++||+|.|++||+++|.+| ++.+|-|||||+||.|+.
T Consensus 206 -------------------------------------~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVy 248 (668)
T KOG0611|consen 206 -------------------------------------KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVY 248 (668)
T ss_pred -------------------------------------ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhh
Confidence 123458899999999999999998 689999999999999997
Q ss_pred C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 528 R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 528 ~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
| |++........++.+.....|.. .....+||.|||..+|.+|.|..+|-.|=|.+-
T Consensus 249 GtMPFDG~Dhk~lvrQIs~GaYrEP~~---PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNw 308 (668)
T KOG0611|consen 249 GTMPFDGRDHKRLVRQISRGAYREPET---PSDASGLIRWMLMVNPERRATIEDIASHWWVNW 308 (668)
T ss_pred cccccCCchHHHHHHHhhcccccCCCC---CchHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence 5 88876665555555544443433 345779999999999999999999999988874
No 59
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=1.7e-30 Score=265.37 Aligned_cols=282 Identities=22% Similarity=0.317 Sum_probs=236.2
Q ss_pred EEEEEcCC-CCEEEEEe-------CCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001366 783 CSISFDRD-EDHFAAAG-------VSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1092)
Q Consensus 783 ~sl~fspd-g~~latgg-------~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~ 854 (1092)
.++.|+|- .++||++. ..|++.|-++.... .......+.-...+..|+|+++..+.+++++.||+++
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~-----gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLr 86 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPK-----GIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLR 86 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCC-----CeEEEEeeecccceeEeeecCCCcceEEEEecCceEE
Confidence 45788883 33444443 45788888875211 1111223344678999999999899999999999999
Q ss_pred EEECCC-CceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEE
Q 001366 855 LWDACT-GQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFG 932 (1092)
Q Consensus 855 IWD~~t-g~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latg 932 (1092)
|||+.. ..++..++.|...|.+++|++.....++++|+|++||+||...+..+.++. |..-|...+|+|...++++++
T Consensus 87 l~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~ 166 (311)
T KOG0277|consen 87 LFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASA 166 (311)
T ss_pred EeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEc
Confidence 999643 358899999999999999999888999999999999999999999999998 567799999999988999999
Q ss_pred ECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc--CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeE
Q 001366 933 SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL--DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKN 1010 (1092)
Q Consensus 933 s~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs--~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~ 1010 (1092)
+.|+++++||+|...+.+. +..|...+.++.|+ +...|+||+.|+.|++||+++. ..++..+.+|.-.|+
T Consensus 167 Sgd~~l~lwdvr~~gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~-------r~pl~eL~gh~~AVR 238 (311)
T KOG0277|consen 167 SGDGTLRLWDVRSPGKFMS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNL-------RTPLFELNGHGLAVR 238 (311)
T ss_pred cCCceEEEEEecCCCceeE-EEeccceeEeecccccCCcEEEecCCCceEEEEehhhc-------cccceeecCCceEEE
Confidence 9999999999998766554 78999999999998 7788999999999999999964 356889999999999
Q ss_pred EEEEecC-CCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeC-CCCEEEEEecCCeEEE
Q 001366 1011 FVGLSTA-DGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRR-RSDMVVAANSSGCIKV 1088 (1092)
Q Consensus 1011 ~v~~spd-g~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~sp-d~~~Lasgs~DG~V~v 1088 (1092)
.|.|||. ...||++|.|-+++|||...+... .+....|+.+|..+.|++ +...+|+++.|+.++|
T Consensus 239 kvk~Sph~~~lLaSasYDmT~riw~~~~~ds~-------------~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~V 305 (311)
T KOG0277|consen 239 KVKFSPHHASLLASASYDMTVRIWDPERQDSA-------------IETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYV 305 (311)
T ss_pred EEecCcchhhHhhhccccceEEecccccchhh-------------hhhhhccceEEeccccccccCceeeecccccceee
Confidence 9999997 458999999999999997644321 233457899999999999 6789999999999999
Q ss_pred EE
Q 001366 1089 LQ 1090 (1092)
Q Consensus 1089 W~ 1090 (1092)
|+
T Consensus 306 w~ 307 (311)
T KOG0277|consen 306 WN 307 (311)
T ss_pred ec
Confidence 97
No 60
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-31 Score=298.21 Aligned_cols=227 Identities=20% Similarity=0.177 Sum_probs=177.2
Q ss_pred ccccceeeeCCCCCccccccccccc-cccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDT-KAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.+..|.||+|++.+ +.+|+ ||. ..+-...+-|++++||||+.+ +++++.-|++
T Consensus 134 SGaQGAVF~Grl~n------etVAVKKV~---------elkETdIKHLRkLkH~NII~F-----------kGVCtqsPcy 187 (904)
T KOG4721|consen 134 SGAQGAVFLGRLHN------ETVAVKKVR---------ELKETDIKHLRKLKHPNIITF-----------KGVCTQSPCY 187 (904)
T ss_pred cCcccceeeeeccC------ceehhHHHh---------hhhhhhHHHHHhccCcceeeE-----------eeeecCCcee
Confidence 34689999999954 44444 333 344555778999999999963 3357788888
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
| ++||||.-|-|.+.|+... ++.......+.++|+.|+.|||.+.|||||||.-||||+.+..|||+|||.++.
T Consensus 188 C-----IiMEfCa~GqL~~VLka~~-~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e 261 (904)
T KOG4721|consen 188 C-----IIMEFCAQGQLYEVLKAGR-PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKE 261 (904)
T ss_pred E-----EeeeccccccHHHHHhccC-ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHh
Confidence 8 8999999999999998765 456657889999999999999999999999999999999999999999999887
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+.+-
T Consensus 262 ~~~~---------------------------------------------------------------------------- 265 (904)
T KOG4721|consen 262 LSDK---------------------------------------------------------------------------- 265 (904)
T ss_pred hhhh----------------------------------------------------------------------------
Confidence 6520
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
.+.+ +++||-.|||||+|.+.+++.|+|||||||+||||||+ |..-...
T Consensus 266 ---------------------------STkM-SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss 317 (904)
T KOG4721|consen 266 ---------------------------STKM-SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS 317 (904)
T ss_pred ---------------------------hhhh-hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh
Confidence 0111 67899999999999999999999999999999999997 2221111
Q ss_pred HHHHHhccccCCC-CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 536 AAAMSDLRDRILP-PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 536 ~~~~~~~~~~~~p-~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
..++.. -...+. |........+.-|++.||.-.|..||++++||.|-
T Consensus 318 AIIwGV-GsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 318 AIIWGV-GSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred eeEEec-cCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 111111 111222 23333456688999999999999999999999993
No 61
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.97 E-value=5.4e-32 Score=284.25 Aligned_cols=250 Identities=17% Similarity=0.180 Sum_probs=189.0
Q ss_pred CCchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC-ch-hhHhhhhhhhhhccCCCCCCCccccceecC
Q 001366 209 SGFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PS-DAALKAAGAMMVASNASPKPVGVGTAVVSN 284 (1092)
Q Consensus 209 ~~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (1092)
.+-..|.+.+|++ .+|.|..-+. +..+...|.|+..-... +. +..----+...|....||.++.+.......
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~----k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~ 116 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVRE----KHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDN 116 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEE----ccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccC
Confidence 3556788888887 3576665554 22233333433311110 11 111122234456667889888776555555
Q ss_pred CCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc
Q 001366 285 GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~ 364 (1092)
..+++ +|+|.+||.|..+|++.++ +++..++.|+.||+.||+|||+++|++|||||+||||+.
T Consensus 117 ~~lym----------------vmeyv~GGElFS~Lrk~~r-F~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~ 179 (355)
T KOG0616|consen 117 SNLYM----------------VMEYVPGGELFSYLRKSGR-FSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQ 179 (355)
T ss_pred CeEEE----------------EEeccCCccHHHHHHhcCC-CCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeecc
Confidence 55553 8999999999999998876 555599999999999999999999999999999999999
Q ss_pred CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 365 ~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
+|.+|++|||.|+...+.
T Consensus 180 ~G~iKitDFGFAK~v~~r-------------------------------------------------------------- 197 (355)
T KOG0616|consen 180 NGHIKITDFGFAKRVSGR-------------------------------------------------------------- 197 (355)
T ss_pred CCcEEEEeccceEEecCc--------------------------------------------------------------
Confidence 999999999999885510
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~e 524 (1092)
..+.||||-|+|||.+...+|+.++|.|||||++||
T Consensus 198 --------------------------------------------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYE 233 (355)
T KOG0616|consen 198 --------------------------------------------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYE 233 (355)
T ss_pred --------------------------------------------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHH
Confidence 116899999999999999999999999999999999
Q ss_pred HcCC---CCcHHHHHHHHHhccccCC-CCCCCCCChhHHHHHHhccccCCCCC-----CCHHHHhhhhhhhhh
Q 001366 525 LFGR---FDSERALAAAMSDLRDRIL-PPSFLSENPKEAGFCLWQLHPEPLSR-----PTTREILQSEVTNEF 588 (1092)
Q Consensus 525 ll~~---f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~li~~lL~~dP~~R-----psa~eiL~~~~~~~~ 588 (1092)
|++| |..........+++..... |+.| ++.+.+|+..+|+.|-.+| ...++|..||||++.
T Consensus 234 MlaG~pPF~~~~~~~iY~KI~~~~v~fP~~f---s~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v 303 (355)
T KOG0616|consen 234 MLAGYPPFYDDNPIQIYEKILEGKVKFPSYF---SSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGV 303 (355)
T ss_pred HHcCCCCCcCCChHHHHHHHHhCcccCCccc---CHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccc
Confidence 9986 5555565555566665544 4444 7999999999999999999 466899999999864
No 62
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-32 Score=302.80 Aligned_cols=258 Identities=17% Similarity=0.180 Sum_probs=192.6
Q ss_pred eecccCCchhHHHhhhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceec
Q 001366 204 KMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVS 283 (1092)
Q Consensus 204 ~~~~~~~f~~~~~~~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (1092)
++--+.-|.... +...+.+|.||||... +.++.+|+|+.--+.......---.++.++...+++|+...+...+.
T Consensus 8 ~~~~~~~~~~~~-~IgrGsfG~Vyk~~d~----~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~ 82 (467)
T KOG0201|consen 8 KIDPELLYTKLE-LIGRGSFGEVYKAIDN----KTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLK 82 (467)
T ss_pred cCCcccccccch-hccccccceeeeeeec----cccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheee
Confidence 333344444332 2334567999999983 45777888776333333332333445667788888988765555443
Q ss_pred CCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc
Q 001366 284 NGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL 363 (1092)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~ 363 (1092)
+..+ ++.||||.||++.++|+..+.. .+.++..|+++++.||+|+|.++.+|||||+.|||+.
T Consensus 83 g~~L----------------wiiMey~~gGsv~~lL~~~~~~-~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s 145 (467)
T KOG0201|consen 83 GTKL----------------WIIMEYCGGGSVLDLLKSGNIL-DEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS 145 (467)
T ss_pred cccH----------------HHHHHHhcCcchhhhhccCCCC-ccceeeeehHHHHHHhhhhhhcceecccccccceeEe
Confidence 3333 3489999999999999887643 6668889999999999999999999999999999999
Q ss_pred cCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCc
Q 001366 364 QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANE 443 (1092)
Q Consensus 364 ~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1092)
..|.||++|||++-.+....
T Consensus 146 ~~g~vkl~DfgVa~ql~~~~------------------------------------------------------------ 165 (467)
T KOG0201|consen 146 ESGDVKLADFGVAGQLTNTV------------------------------------------------------------ 165 (467)
T ss_pred ccCcEEEEecceeeeeechh------------------------------------------------------------
Confidence 99999999999987654110
Q ss_pred cccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHH
Q 001366 444 SDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFF 523 (1092)
Q Consensus 444 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ 523 (1092)
... .+++|||+|||||++.+..|+.++||||||++.+
T Consensus 166 ------------------------------------------~rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITai 202 (467)
T KOG0201|consen 166 ------------------------------------------KRR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAI 202 (467)
T ss_pred ------------------------------------------hcc-ccccccccccchhhhccccccchhhhhhhhHHHH
Confidence 000 2789999999999999989999999999999999
Q ss_pred HHcCCCCcHHHHHHHHHhc--cccCCCCCCC-CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 524 ELFGRFDSERALAAAMSDL--RDRILPPSFL-SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 524 ell~~f~~~~~~~~~~~~~--~~~~~p~~~~-~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
||++|-++..+... |+.+ -....||.+. ..++.+++|+..||.++|+.||+|.++|.|+|+..
T Consensus 203 Ela~GePP~s~~hP-mrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 203 ELAKGEPPHSKLHP-MRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred HHhcCCCCCcccCc-ceEEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 99998555433322 2222 1223344433 55688999999999999999999999999999976
No 63
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.97 E-value=9.6e-31 Score=282.89 Aligned_cols=285 Identities=18% Similarity=0.271 Sum_probs=237.5
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.+..|...|..+.|-++...|++||.|..|++|++.... ........+..+.|+.+.|.++ +.++++++.|+.+
T Consensus 170 ~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k-----~~~~~tLaGs~g~it~~d~d~~-~~~~iAas~d~~~ 243 (459)
T KOG0288|consen 170 VLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEK-----SELISTLAGSLGNITSIDFDSD-NKHVIAASNDKNL 243 (459)
T ss_pred hhhccccccceeEEccCcchhhhcchhhhhhhhhcccch-----hhhhhhhhccCCCcceeeecCC-CceEEeecCCCce
Confidence 356899999999999999999999999999999986521 1222344566788999999998 8888899999999
Q ss_pred EEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEE
Q 001366 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGS 933 (1092)
Q Consensus 854 ~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs 933 (1092)
++|++...+...+|.+|++.|+++.|.. ....+++|+.|.+||+||+....|..++...+.+..|..++ ..+++|.
T Consensus 244 r~Wnvd~~r~~~TLsGHtdkVt~ak~~~-~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~---~~~~SgH 319 (459)
T KOG0288|consen 244 RLWNVDSLRLRHTLSGHTDKVTAAKFKL-SHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSI---SDVISGH 319 (459)
T ss_pred eeeeccchhhhhhhcccccceeeehhhc-cccceeeccccchhhhhhhhhhheeccccccccccceEecc---eeeeecc
Confidence 9999999999999999999999999998 44459999999999999999999999988888888887763 4789999
Q ss_pred CCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcC----CCCC
Q 001366 934 ADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG----HTNE 1008 (1092)
Q Consensus 934 ~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~----h~~~ 1008 (1092)
.|++|++||+|+... ......+. .|+++..+ ++..|++++.|.++.+.|+++.. ...++.. -...
T Consensus 320 ~DkkvRfwD~Rs~~~-~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~e--------I~~~~sA~g~k~asD 389 (459)
T KOG0288|consen 320 FDKKVRFWDIRSADK-TRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKE--------IRQTFSAEGFKCASD 389 (459)
T ss_pred cccceEEEeccCCce-eeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeeccccc--------EEEEeeccccccccc
Confidence 999999999998765 34445544 89999998 67789999999999999999543 2223322 1123
Q ss_pred eEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEE
Q 001366 1009 KNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKV 1088 (1092)
Q Consensus 1009 V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~v 1088 (1092)
.+.+.|||++.|+|+||.||.|+||++.+++....... ......|++++|+|.|..|++++.++.+.+
T Consensus 390 wtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~------------s~s~~aI~s~~W~~sG~~Llsadk~~~v~l 457 (459)
T KOG0288|consen 390 WTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSL------------STSNAAITSLSWNPSGSGLLSADKQKAVTL 457 (459)
T ss_pred cceeEECCCCceeeeccCCCcEEEEEccCceEEEEecc------------CCCCcceEEEEEcCCCchhhcccCCcceEe
Confidence 77899999999999999999999999999887665541 111226999999999999999999999999
Q ss_pred EE
Q 001366 1089 LQ 1090 (1092)
Q Consensus 1089 W~ 1090 (1092)
|.
T Consensus 458 W~ 459 (459)
T KOG0288|consen 458 WT 459 (459)
T ss_pred cC
Confidence 94
No 64
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.97 E-value=1.3e-29 Score=271.86 Aligned_cols=283 Identities=23% Similarity=0.321 Sum_probs=236.5
Q ss_pred ccchhhhhhccccccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCC---CCEEEEEeCCCcEE
Q 001366 728 DRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRD---EDHFAAAGVSKKIK 804 (1092)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspd---g~~latgg~D~~I~ 804 (1092)
-|++|+.++.. .+.-+|++++||++++|+..- ++. ..+.+|.++|.+++|.-. ...|++||.|.+++
T Consensus 103 ~hdDWVSsv~~----~~~~IltgsYDg~~riWd~~G-k~~-----~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~ 172 (423)
T KOG0313|consen 103 LHDDWVSSVKG----ASKWILTGSYDGTSRIWDLKG-KSI-----KTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLR 172 (423)
T ss_pred cchhhhhhhcc----cCceEEEeecCCeeEEEecCC-ceE-----EEEecCCcceeeeEEEecCCccceEEEecCCceEE
Confidence 36788888754 366789999999999998642 222 235699999999888643 33699999999999
Q ss_pred EEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCC------------------------
Q 001366 805 IFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACT------------------------ 860 (1092)
Q Consensus 805 Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~t------------------------ 860 (1092)
+|.++..... ........+|...|-+|.-.++ +.+++|||+|.+|+||+..+
T Consensus 173 Lw~~~~~~~~---~~~~~~~~GHk~~V~sVsv~~s-gtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~ 248 (423)
T KOG0313|consen 173 LWKWNVGENK---VKALKVCRGHKRSVDSVSVDSS-GTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGG 248 (423)
T ss_pred EEEecCchhh---hhHHhHhcccccceeEEEecCC-CCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhccc
Confidence 9998753221 1122233489999999999998 99999999999999999321
Q ss_pred -CceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEE
Q 001366 861 -GQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTY 939 (1092)
Q Consensus 861 -g~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~ 939 (1092)
+.++.++.+|+.+|.+|.|++ ...++|+|+|.+|+.||+.++.++.++.....++|+..+|.. .+|++|+.|..++
T Consensus 249 ~r~P~vtl~GHt~~Vs~V~w~d--~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~-~Ll~~gssdr~ir 325 (423)
T KOG0313|consen 249 TRTPLVTLEGHTEPVSSVVWSD--ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLS-KLLASGSSDRHIR 325 (423)
T ss_pred ccCceEEecccccceeeEEEcC--CCceEeecccceEEEEEeecccceeeeecCcceeEeeccccc-ceeeecCCCCcee
Confidence 135677889999999999997 678999999999999999999999999999999999999976 5999999999999
Q ss_pred EEEcCCCC--cceEEecCCCCCeEEEEEc--CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEe
Q 001366 940 CYDLRNAR--APWCVLAGHEKAVSYVKFL--DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLS 1015 (1092)
Q Consensus 940 vwDlr~~~--~~~~~l~~H~~~V~~v~fs--~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s 1015 (1092)
+||.|++. .+..++.+|++.|.++.|+ +...|++|+.||++++||+|. ...+++.+.+|...|.++.|+
T Consensus 326 l~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS-------~k~plydI~~h~DKvl~vdW~ 398 (423)
T KOG0313|consen 326 LWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRS-------TKAPLYDIAGHNDKVLSVDWN 398 (423)
T ss_pred ecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEecc-------CCCcceeeccCCceEEEEecc
Confidence 99999764 3556789999999999999 445699999999999999994 345789999999999999998
Q ss_pred cCCCEEEEEecCCcEEEEeC
Q 001366 1016 TADGYIACGSESNEVYAYHR 1035 (1092)
Q Consensus 1016 pdg~~lasgs~Dg~I~Iwd~ 1035 (1092)
. +.+|++||.|++|+|+..
T Consensus 399 ~-~~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 399 E-GGLIVSGGADNKLRIFKG 417 (423)
T ss_pred C-CceEEeccCcceEEEecc
Confidence 4 568999999999999953
No 65
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.97 E-value=1.5e-31 Score=305.81 Aligned_cols=242 Identities=16% Similarity=0.152 Sum_probs=179.9
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.++.|.||++.... .+..++.|+...... ........++..++....|||++.+......+...+
T Consensus 5 ~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~--------- 71 (323)
T cd05571 5 KGTFGKVILVREKA----TGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLC--------- 71 (323)
T ss_pred eCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEE---------
Confidence 46789999887522 245556655432211 112233455667788889999998766544333333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++|||+.|++|.+++...+ .+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus 72 -------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~ 143 (323)
T cd05571 72 -------FVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCK 143 (323)
T ss_pred -------EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 3899999999999997654 56777899999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
......
T Consensus 144 ~~~~~~-------------------------------------------------------------------------- 149 (323)
T cd05571 144 EGISDG-------------------------------------------------------------------------- 149 (323)
T ss_pred ccccCC--------------------------------------------------------------------------
Confidence 522000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
......+||+.|+|||++.+..++.++|||||||+||||+++ |.....
T Consensus 150 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 200 (323)
T cd05571 150 -----------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 200 (323)
T ss_pred -----------------------------CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH
Confidence 001145799999999999999999999999999999999986 433322
Q ss_pred HHHHHHhcccc-CCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 535 LAAAMSDLRDR-ILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 535 ~~~~~~~~~~~-~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
........... .+| ...++++.+|+.+||++||++|| ++.+|++||||...
T Consensus 201 ~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 201 EKLFELILMEEIRFP---RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred HHHHHHHHcCCCCCC---CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 22222222221 222 23578899999999999999999 89999999999764
No 66
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=1.8e-28 Score=281.08 Aligned_cols=330 Identities=19% Similarity=0.234 Sum_probs=263.1
Q ss_pred hhccchhhhhhccccccCCCCcEEeEcCCeEEEEEccc------------------------ce-----EEeeEEeeeec
Q 001366 726 LRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSK------------------------FE-----VQGMLRTGEFN 776 (1092)
Q Consensus 726 l~~~~~~~~~~~~~~~~~~~~~l~~~~D~~~k~w~~~~------------------------~~-----~~~~l~~~~l~ 776 (1092)
+.+|.+.+.+..+ ..+.....+.+.||.+-+|.+.. -+ .....+.+-+.
T Consensus 185 l~gHkd~VvacfF--~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln 262 (893)
T KOG0291|consen 185 LNGHKDYVVACFF--GANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLN 262 (893)
T ss_pred ccCCCcceEEEEe--ccCcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeec
Confidence 5567777666544 23344567889999999998861 00 00111223344
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECC-CcEEE
Q 001366 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYD-GVVKL 855 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~D-gtV~I 855 (1092)
..+..|++.+||+..+.||+|=.+|...+|++... ......--...+|..++|+.. |++||.|+.- |.+-|
T Consensus 263 ~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f-------~lih~LSis~~~I~t~~~N~t-GDWiA~g~~klgQLlV 334 (893)
T KOG0291|consen 263 QNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDF-------NLIHSLSISDQKILTVSFNST-GDWIAFGCSKLGQLLV 334 (893)
T ss_pred ccccceeeeeccCCceEEEEEecCCeeEEEecCCc-------eEEEEeecccceeeEEEeccc-CCEEEEcCCccceEEE
Confidence 55689999999999999999999999999998751 111122224678999999987 8999988765 89999
Q ss_pred EECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEEC
Q 001366 856 WDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSA 934 (1092)
Q Consensus 856 WD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~ 934 (1092)
|+..+...+-..++|...+.+++++| |+.++|+|+.||.|||||..++.|+.+|. |.+.|+.++|+..+ +.+++.+-
T Consensus 335 weWqsEsYVlKQQgH~~~i~~l~YSp-Dgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g-~~llssSL 412 (893)
T KOG0291|consen 335 WEWQSESYVLKQQGHSDRITSLAYSP-DGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARG-NVLLSSSL 412 (893)
T ss_pred EEeeccceeeeccccccceeeEEECC-CCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecC-CEEEEeec
Confidence 99999999999999999999999999 99999999999999999999999999998 78899999999998 48999999
Q ss_pred CCeEEEEEcCCCCcceEEecC-CCCCeEEEEEcCCC-EEEEEECCC-eEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEE
Q 001366 935 DYRTYCYDLRNARAPWCVLAG-HEKAVSYVKFLDSG-TLVTASTDN-KLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNF 1011 (1092)
Q Consensus 935 Dg~I~vwDlr~~~~~~~~l~~-H~~~V~~v~fs~~~-~L~Sgs~Dg-~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~ 1011 (1092)
||+|+.||+...+. ..++.. ..-...||+..+.+ .+..|+.|. .|.||++. +++.+-.+.||.++|.+
T Consensus 413 DGtVRAwDlkRYrN-fRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~q--------TGqllDiLsGHEgPVs~ 483 (893)
T KOG0291|consen 413 DGTVRAWDLKRYRN-FRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQ--------TGQLLDILSGHEGPVSG 483 (893)
T ss_pred CCeEEeeeecccce-eeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEee--------cCeeeehhcCCCCccee
Confidence 99999999987654 344443 23445677766445 455566665 49999999 56788899999999999
Q ss_pred EEEecCCCEEEEEecCCcEEEEeCCCC-CceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1012 VGLSTADGYIACGSESNEVYAYHRSLP-MPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1012 v~~spdg~~lasgs~Dg~I~Iwd~~~~-~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
++|+|++..||+||+|++|++||+-.. ..+.++ .+..-|..++|+|+|.-||++..||.|.+||
T Consensus 484 l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl---------------~i~sdvl~vsfrPdG~elaVaTldgqItf~d 548 (893)
T KOG0291|consen 484 LSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETL---------------EIRSDVLAVSFRPDGKELAVATLDGQITFFD 548 (893)
T ss_pred eEEccccCeEEeccccceEEEEEeeccCceeeeE---------------eeccceeEEEEcCCCCeEEEEEecceEEEEE
Confidence 999999999999999999999996433 222222 2345699999999999999999999999998
Q ss_pred c
Q 001366 1091 M 1091 (1092)
Q Consensus 1091 l 1091 (1092)
.
T Consensus 549 ~ 549 (893)
T KOG0291|consen 549 I 549 (893)
T ss_pred h
Confidence 6
No 67
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=2.1e-29 Score=254.61 Aligned_cols=278 Identities=19% Similarity=0.291 Sum_probs=234.5
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.+..|..+|..+.|+-||+|.+|+|.|++|++|+... ........+|...|..++.+.+ ...+++|+.|..|
T Consensus 12 ~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~r-------g~liktYsghG~EVlD~~~s~D-nskf~s~GgDk~v 83 (307)
T KOG0316|consen 12 ILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLR-------GALIKTYSGHGHEVLDAALSSD-NSKFASCGGDKAV 83 (307)
T ss_pred eecccccceEEEEEccCCCEEEEcCCCceEEeecccc-------cceeeeecCCCceeeecccccc-ccccccCCCCceE
Confidence 4668999999999999999999999999999999754 2334456679999999998887 7889999999999
Q ss_pred EEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCC--ceeeeEe-cCCceEEEEEccCCCeEEE
Q 001366 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEK--NSLATIK-NIANVCCVQFSAHSSHLLA 930 (1092)
Q Consensus 854 ~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~--~~l~~l~-~~~~V~sl~fsp~~~~~la 930 (1092)
.+||+.+|+.++.|.+|...|+.|.|+. +...++|||.|.++++||.++. ++++.+. ....|.++.... +.++
T Consensus 84 ~vwDV~TGkv~Rr~rgH~aqVNtV~fNe-esSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~---heIv 159 (307)
T KOG0316|consen 84 QVWDVNTGKVDRRFRGHLAQVNTVRFNE-ESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAE---HEIV 159 (307)
T ss_pred EEEEcccCeeeeecccccceeeEEEecC-cceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecc---cEEE
Confidence 9999999999999999999999999998 8899999999999999999865 5677776 467899999874 5799
Q ss_pred EEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCe
Q 001366 931 FGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEK 1009 (1092)
Q Consensus 931 tgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V 1009 (1092)
+|+.||+++.||+|.+... . .--..+|++++|+ +++..+.++.|++|++.|-. +++.+..++||.+.-
T Consensus 160 aGS~DGtvRtydiR~G~l~-s--Dy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~--------tGklL~sYkGhkn~e 228 (307)
T KOG0316|consen 160 AGSVDGTVRTYDIRKGTLS-S--DYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKE--------TGKLLKSYKGHKNME 228 (307)
T ss_pred eeccCCcEEEEEeecceee-h--hhcCCcceeEEecCCCCEEEEeeccceeeecccc--------hhHHHHHhcccccce
Confidence 9999999999999988632 2 2235589999999 78889999999999999988 577888999998865
Q ss_pred EE--EEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCC-EEEEEEeCCCCEEEEEecCCeE
Q 001366 1010 NF--VGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLF-VSSVCWRRRSDMVVAANSSGCI 1086 (1092)
Q Consensus 1010 ~~--v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~-V~sva~spd~~~Lasgs~DG~V 1086 (1092)
+- ++++.....+++||+||.|++||+.....+..++. +... |.+++++|.-.-|++|... .+
T Consensus 229 ykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~--------------~~~v~v~dl~~hp~~~~f~~A~~~-~~ 293 (307)
T KOG0316|consen 229 YKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSV--------------VSTVIVTDLSCHPTMDDFITATGH-GD 293 (307)
T ss_pred eeeeeeecccceeEEeccCCceEEEEEeccceeeeeecc--------------CCceeEEeeecccCccceeEecCC-ce
Confidence 44 46666677999999999999999998888876653 2333 8999999988777777644 34
Q ss_pred EEE
Q 001366 1087 KVL 1089 (1092)
Q Consensus 1087 ~vW 1089 (1092)
..|
T Consensus 294 ~~~ 296 (307)
T KOG0316|consen 294 LFW 296 (307)
T ss_pred ece
Confidence 444
No 68
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-30 Score=299.82 Aligned_cols=252 Identities=20% Similarity=0.231 Sum_probs=199.4
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCch--hhHhhhhhhhhhccCC-CCCCCccccceecCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS--DAALKAAGAMMVASNA-SPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 287 (1092)
.|.+...++ ..|+||+... +..+...|+|+........ ....-.++.+.+.... |||++.+.+..-.....
T Consensus 36 ~Y~l~~~lG~G~Fg~v~~~~~----~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~ 111 (382)
T KOG0032|consen 36 KYELGRELGRGQFGVVYLCRE----KSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV 111 (382)
T ss_pred cEEehhhhCCCCceEEEEEEe----cCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence 355555555 4799999998 3447777886654333322 2345556677788887 99999988887665544
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC--
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-- 365 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~-- 365 (1092)
+ ++||+|.||.|.+.|... . .++..+..+++||+++|.|||++||+||||||+|||+...
T Consensus 112 ~----------------lvmEL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~ 173 (382)
T KOG0032|consen 112 Y----------------LVMELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDE 173 (382)
T ss_pred E----------------EEEEecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccC
Confidence 4 389999999999999776 3 8888999999999999999999999999999999999744
Q ss_pred --CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCc
Q 001366 366 --NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANE 443 (1092)
Q Consensus 366 --~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1092)
+.+|++|||++.....
T Consensus 174 ~~~~ik~~DFGla~~~~~-------------------------------------------------------------- 191 (382)
T KOG0032|consen 174 GSGRIKLIDFGLAKFIKP-------------------------------------------------------------- 191 (382)
T ss_pred CCCcEEEeeCCCceEccC--------------------------------------------------------------
Confidence 4799999999987541
Q ss_pred cccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHH
Q 001366 444 SDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFF 523 (1092)
Q Consensus 444 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ 523 (1092)
...+...+||+.|+|||++.+..|+..+||||+||++|
T Consensus 192 ------------------------------------------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~y 229 (382)
T KOG0032|consen 192 ------------------------------------------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILY 229 (382)
T ss_pred ------------------------------------------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHH
Confidence 01233789999999999999999999999999999999
Q ss_pred HHcCC---CCcHHHHHHHHHhccc--cCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 524 ELFGR---FDSERALAAAMSDLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 524 ell~~---f~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
.|++| |.+..........++. ....+.|...+..+.+|+..||..||..|+|+.++|+|||+.+...
T Consensus 230 iLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~ 301 (382)
T KOG0032|consen 230 ILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGE 301 (382)
T ss_pred HHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCcc
Confidence 99997 5444433333333333 3456778888999999999999999999999999999999987533
No 69
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=7.9e-31 Score=317.11 Aligned_cols=197 Identities=28% Similarity=0.419 Sum_probs=163.0
Q ss_pred cccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccccccc
Q 001366 305 RQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESAS 384 (1092)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~ 384 (1092)
+.||||+-.+|++++......-...+.+++|+||++||.|+|++|||||||||.||+|++.+.|||.|||+|.....-..
T Consensus 673 IQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~ 752 (1351)
T KOG1035|consen 673 IQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLE 752 (1351)
T ss_pred EEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhh
Confidence 57999999999999987755435668999999999999999999999999999999999999999999999987441000
Q ss_pred CCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccccccc
Q 001366 385 LDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTN 464 (1092)
Q Consensus 385 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 464 (1092)
. .+.. ..+.++
T Consensus 753 ~----------------~d~~---------~~~~~~-------------------------------------------- 763 (1351)
T KOG1035|consen 753 S----------------IDQD---------LSFSTN-------------------------------------------- 763 (1351)
T ss_pred h----------------Hhhc---------cCcccc--------------------------------------------
Confidence 0 0000 000000
Q ss_pred CCCCCccCCCCCcccccccccccccccccccccccCcccccCC---CCCccccchhhhHHHHHHcCCCCcHHHHHHHHHh
Q 001366 465 AGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG---VCTTSSNIYSLGVLFFELFGRFDSERALAAAMSD 541 (1092)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~---~~t~~sDIwSLGvll~ell~~f~~~~~~~~~~~~ 541 (1092)
.........|+.+||.-|+|||++.+. .|+.|+||||||||||||+.||.+.+++...+..
T Consensus 764 ----------------~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~ 827 (1351)
T KOG1035|consen 764 ----------------RAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTN 827 (1351)
T ss_pred ----------------ccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHh
Confidence 000112345688999999999999884 4999999999999999999999999999999999
Q ss_pred ccccCCCCC---CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001366 542 LRDRILPPS---FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1092)
Q Consensus 542 ~~~~~~p~~---~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~ 586 (1092)
++...+|.. +....|.++.+|.|||..||.+||||.|+|+|+|+.
T Consensus 828 LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 828 LRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred cccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 998888877 777789999999999999999999999999999985
No 70
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=4.1e-31 Score=299.47 Aligned_cols=212 Identities=20% Similarity=0.182 Sum_probs=181.1
Q ss_pred hHhhhhhhhhhccCCCCCCCccccceecCCC-CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHH
Q 001366 256 AALKAAGAMMVASNASPKPVGVGTAVVSNGS-LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLY 333 (1092)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~ 333 (1092)
...+..+..++...+||||+...+..+-+.- ++ ++|+||+||+|.+.|+.. +..+++..+..
T Consensus 47 r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~----------------Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~ 110 (426)
T KOG0589|consen 47 RRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLC----------------IVMEYCEGGDLAQLIKEQKGVLFPEERILK 110 (426)
T ss_pred hHHHHHHHHHHHhccCCCeeeeccchhcCCceEE----------------EEEeecCCCCHHHHHHHHhhccccHHHHHH
Confidence 3467888889999999999987777665554 44 389999999999999654 47788889999
Q ss_pred HHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchh
Q 001366 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (1092)
Q Consensus 334 i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 413 (1092)
+|.||+.||.|||+++|+|||||+.||+++.++.||+.|||+|+.+..+.
T Consensus 111 ~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~------------------------------ 160 (426)
T KOG0589|consen 111 WFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED------------------------------ 160 (426)
T ss_pred HHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch------------------------------
Confidence 99999999999999999999999999999999999999999999876211
Q ss_pred hcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCccccccccccccccccc
Q 001366 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (1092)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (1092)
....+.+
T Consensus 161 -------------------------------------------------------------------------~~a~tvv 167 (426)
T KOG0589|consen 161 -------------------------------------------------------------------------SLASTVV 167 (426)
T ss_pred -------------------------------------------------------------------------hhhheec
Confidence 0112789
Q ss_pred ccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCC
Q 001366 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEP 570 (1092)
Q Consensus 494 gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP 570 (1092)
||+.||+||.+.+.+|+.|+|||||||++|||++- |...+.....+++.+.. ..|.....+.+++.++..||..+|
T Consensus 168 GTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-~~Plp~~ys~el~~lv~~~l~~~P 246 (426)
T KOG0589|consen 168 GTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL-YSPLPSMYSSELRSLVKSMLRKNP 246 (426)
T ss_pred CCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-CCCCCccccHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999983 77777666666666654 455556678999999999999999
Q ss_pred CCCCCHHHHhhhhhhhh
Q 001366 571 LSRPTTREILQSEVTNE 587 (1092)
Q Consensus 571 ~~Rpsa~eiL~~~~~~~ 587 (1092)
..||++.++|.+|.+..
T Consensus 247 ~~RPsa~~LL~~P~l~~ 263 (426)
T KOG0589|consen 247 EHRPSALELLRRPHLLR 263 (426)
T ss_pred ccCCCHHHHhhChhhhh
Confidence 99999999999987754
No 71
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.97 E-value=2e-30 Score=273.68 Aligned_cols=277 Identities=17% Similarity=0.345 Sum_probs=232.8
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEE
Q 001366 778 SANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWD 857 (1092)
Q Consensus 778 h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD 857 (1092)
....|.|+.++ ...+++|..|++|+|||.+. ..+.....+|.+.|.|+.|.. ..|+|||.|.||+|||
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~-------~~c~~~L~GHtGSVLCLqyd~---rviisGSSDsTvrvWD 263 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNS-------LECLKILTGHTGSVLCLQYDE---RVIVSGSSDSTVRVWD 263 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEecccc-------HHHHHhhhcCCCcEEeeeccc---eEEEecCCCceEEEEe
Confidence 45679999885 56899999999999999875 345556789999999999874 5999999999999999
Q ss_pred CCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceee---eE-ecCCceEEEEEccCCCeEEEEEE
Q 001366 858 ACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLA---TI-KNIANVCCVQFSAHSSHLLAFGS 933 (1092)
Q Consensus 858 ~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~---~l-~~~~~V~sl~fsp~~~~~latgs 933 (1092)
+++|+++.++-+|...|..+.|+. .+++|+|.|.+|.+||+.+...+. .+ .|.+.|+.+.|+. .++++++
T Consensus 264 v~tge~l~tlihHceaVLhlrf~n---g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~---kyIVsAS 337 (499)
T KOG0281|consen 264 VNTGEPLNTLIHHCEAVLHLRFSN---GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD---KYIVSAS 337 (499)
T ss_pred ccCCchhhHHhhhcceeEEEEEeC---CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecccc---ceEEEec
Confidence 999999999999999999999974 689999999999999998765332 22 2678999999974 4999999
Q ss_pred CCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEE
Q 001366 934 ADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVG 1013 (1092)
Q Consensus 934 ~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~ 1013 (1092)
.|.+|++|++.+.+ .+.++.+|+..|.|+.| .+.++++||+|++|++||+. .+.|++.+.||+.-|.++.
T Consensus 338 gDRTikvW~~st~e-fvRtl~gHkRGIAClQY-r~rlvVSGSSDntIRlwdi~--------~G~cLRvLeGHEeLvRciR 407 (499)
T KOG0281|consen 338 GDRTIKVWSTSTCE-FVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIE--------CGACLRVLEGHEELVRCIR 407 (499)
T ss_pred CCceEEEEecccee-eehhhhcccccceehhc-cCeEEEecCCCceEEEEecc--------ccHHHHHHhchHHhhhhee
Confidence 99999999999876 46889999999999998 48899999999999999998 6889999999999999999
Q ss_pred EecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1014 LSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1014 ~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
|. .+.|++|+.||+|+|||+..+..-.... ..........|.+.|..+.|. ...+++++.|..|-||++
T Consensus 408 Fd--~krIVSGaYDGkikvWdl~aaldpra~~-----~~~Cl~~lv~hsgRVFrLQFD--~fqIvsssHddtILiWdF 476 (499)
T KOG0281|consen 408 FD--NKRIVSGAYDGKIKVWDLQAALDPRAPA-----STLCLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWDF 476 (499)
T ss_pred ec--CceeeeccccceEEEEecccccCCcccc-----cchHHHhhhhccceeEEEeec--ceEEEeccCCCeEEEEEc
Confidence 96 5689999999999999987654321110 001112345688889999886 457888899999999996
No 72
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.97 E-value=2.9e-30 Score=311.07 Aligned_cols=262 Identities=18% Similarity=0.184 Sum_probs=187.6
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+...+ +|.|.||++... ..+..++.|+...... ........++...+....|++++.......+......
T Consensus 33 rY~i~~~LG~G~fG~Vy~a~~~----~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 33 KYWISRVLGSGATGTVLCAKRV----SDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred CEEEEEEEecCCCEEEEEEEEc----CCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 35554444 478999999752 2245666666533222 2233445566677778899998875544333222110
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~---~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
....+ ...+|||+.||+|.++|+.. ...+++.++..|+.||+.||+|||++||+||||||+||||+.++
T Consensus 109 -~~~~~-------i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~ 180 (496)
T PTZ00283 109 -ENVLM-------IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNG 180 (496)
T ss_pred -ccceE-------EEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCC
Confidence 00001 12479999999999999653 34577889999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+||+|||+++.+.....
T Consensus 181 ~vkL~DFGls~~~~~~~~-------------------------------------------------------------- 198 (496)
T PTZ00283 181 LVKLGDFGFSKMYAATVS-------------------------------------------------------------- 198 (496)
T ss_pred CEEEEecccCeecccccc--------------------------------------------------------------
Confidence 999999999876441000
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
.......+||+.|+|||++.+..++.++|||||||+||||+
T Consensus 199 ---------------------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLl 239 (496)
T PTZ00283 199 ---------------------------------------DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELL 239 (496)
T ss_pred ---------------------------------------ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 00011457999999999999999999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
++ |............+ ....++.....++++.+|+.+||+++|.+||++.++|+|||+...
T Consensus 240 tG~~Pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~ 303 (496)
T PTZ00283 240 TLKRPFDGENMEEVMHKTL-AGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF 303 (496)
T ss_pred HCCCCCCCCCHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence 85 54433332222222 222333344567899999999999999999999999999998764
No 73
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.97 E-value=3.2e-31 Score=303.94 Aligned_cols=249 Identities=15% Similarity=0.138 Sum_probs=185.2
Q ss_pred CchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCC
Q 001366 210 GFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNG 285 (1092)
Q Consensus 210 ~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (1092)
.+..|.+.+.++ +.|.||++...+ .++.++.|+...... ........++..++...+|||++.++.....+.
T Consensus 16 ~~~~y~~~~~lg~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 91 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFGRVRIAKHKG----TGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN 91 (329)
T ss_pred CchheEEEEEEEecCCeEEEEEEECC----CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC
Confidence 345676666664 689999998632 245566655432211 112223445667788889999998776655433
Q ss_pred CCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC
Q 001366 286 SLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS 365 (1092)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~ 365 (1092)
..+ ++|||+.|++|.++|...+ .++...+..++.||+.||+|||++||+||||||+||||+.+
T Consensus 92 ~~~----------------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~ 154 (329)
T PTZ00263 92 RVY----------------FLLEFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNK 154 (329)
T ss_pred EEE----------------EEEcCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCC
Confidence 333 3899999999999998765 45666899999999999999999999999999999999999
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+.+||+|||+++...+.
T Consensus 155 ~~~kl~Dfg~~~~~~~~--------------------------------------------------------------- 171 (329)
T PTZ00263 155 GHVKVTDFGFAKKVPDR--------------------------------------------------------------- 171 (329)
T ss_pred CCEEEeeccCceEcCCC---------------------------------------------------------------
Confidence 99999999988653210
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL 525 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~el 525 (1092)
.....||+.|+|||++.+..++.++|||||||+||||
T Consensus 172 -------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 208 (329)
T PTZ00263 172 -------------------------------------------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEF 208 (329)
T ss_pred -------------------------------------------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHH
Confidence 0034689999999999998899999999999999999
Q ss_pred cCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhh
Q 001366 526 FGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNE 587 (1092)
Q Consensus 526 l~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-----a~eiL~~~~~~~ 587 (1092)
+++ |...................| ...++.+.+||.+||++||.+||+ +++|+.||||..
T Consensus 209 ltg~~pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 209 IAGYPPFFDDTPFRIYEKILAGRLKFP--NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred HcCCCCCCCCCHHHHHHHHhcCCcCCC--CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 986 433333222222222221112 224678899999999999999997 799999999976
No 74
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.97 E-value=5.2e-31 Score=299.79 Aligned_cols=243 Identities=17% Similarity=0.149 Sum_probs=179.2
Q ss_pred ccccceeeeCCCCCcccccccccccccccccc--CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTT--MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++...+ .+..++.|+..... .........++..++....||||+.+......+...+
T Consensus 3 ~G~~g~Vy~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--------- 69 (312)
T cd05585 3 KGSFGKVMQVRKRD----TQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLY--------- 69 (312)
T ss_pred cCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEE---------
Confidence 46889999988633 24445555442211 1122333455667788889999998665544322222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++|||+.|++|.+++...+ .++..++..++.||+.||+|||++||+||||||+|||++.++.+|++|||+++
T Consensus 70 -------lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~ 141 (312)
T cd05585 70 -------LVLAFINGGELFHHLQREG-RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCK 141 (312)
T ss_pred -------EEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccc
Confidence 3899999999999997754 46777999999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
......
T Consensus 142 ~~~~~~-------------------------------------------------------------------------- 147 (312)
T cd05585 142 LNMKDD-------------------------------------------------------------------------- 147 (312)
T ss_pred cCccCC--------------------------------------------------------------------------
Confidence 522000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
......+||+.|+|||++.+..++.++|||||||+||||++| |.....
T Consensus 148 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~ 198 (312)
T cd05585 148 -----------------------------DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV 198 (312)
T ss_pred -----------------------------CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH
Confidence 001145789999999999999999999999999999999986 433332
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC---CHHHHhhhhhhhhh
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP---TTREILQSEVTNEF 588 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp---sa~eiL~~~~~~~~ 588 (1092)
.......+.... ......++.+.+|+.+||.+||.+|| ++.++|.||||...
T Consensus 199 ~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 199 NEMYRKILQEPL--RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred HHHHHHHHcCCC--CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 222222222221 11234578899999999999999997 57999999999763
No 75
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=1e-30 Score=274.25 Aligned_cols=248 Identities=21% Similarity=0.260 Sum_probs=183.4
Q ss_pred HhhhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCC
Q 001366 216 VKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 216 ~~~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
+-....||.++|.-.. +|+.-|.|+.. +++. .+-.++--...+.||||+.+++. |..... ++
T Consensus 70 LG~GinGkV~~C~~k~------T~ekfALKvL~----Ds~K-ARrEVeLHw~~s~h~~iV~IidV--yeNs~~-----~r 131 (400)
T KOG0604|consen 70 LGAGINGKVVQCVHKR------TQEKFALKVLL----DSPK-ARREVELHWMASGHPHIVSIIDV--YENSYQ-----GR 131 (400)
T ss_pred hccccCCceEEEEecc------chhhhHHHHHh----cCHH-HHhHhhhhhhhcCCCceEEeehh--hhhhcc-----Cc
Confidence 3444557777777665 35555555552 2221 12222333667799999987665 222221 22
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc---cCCcEEEe
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL---QSNQVKYI 371 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~-~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~---~~~~vkl~ 371 (1092)
.+ -+++||.++||.|...|..++. .+++.++-.|++||..||.|||+.+|+||||||+|+|.. ++..+|++
T Consensus 132 kc-----LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 132 KC-----LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred ee-----eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEec
Confidence 22 2468999999999999977654 578889999999999999999999999999999999997 44669999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||.|+...++
T Consensus 207 DfGFAK~t~~~--------------------------------------------------------------------- 217 (400)
T KOG0604|consen 207 DFGFAKETQEP--------------------------------------------------------------------- 217 (400)
T ss_pred ccccccccCCC---------------------------------------------------------------------
Confidence 99999874411
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCc
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS 531 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~ 531 (1092)
..+.+.+-||+|.|||++...+|+.++|+|||||++|-|||||++
T Consensus 218 -----------------------------------~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPP 262 (400)
T KOG0604|consen 218 -----------------------------------GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262 (400)
T ss_pred -----------------------------------ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCc
Confidence 113366789999999999989999999999999999999998766
Q ss_pred HHH-HHHH----HH-hcc---ccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 532 ERA-LAAA----MS-DLR---DRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 532 ~~~-~~~~----~~-~~~---~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
+.. +-.. |+ .++ .....|.+...+....++|+.||.-+|++|.|+.+++.|||++....
T Consensus 263 FYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~ 330 (400)
T KOG0604|consen 263 FYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEA 330 (400)
T ss_pred ccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccccc
Confidence 531 1111 11 111 11223567777888899999999999999999999999999987643
No 76
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=3.3e-29 Score=287.49 Aligned_cols=340 Identities=19% Similarity=0.198 Sum_probs=269.9
Q ss_pred hhhhccchhhhhhccccccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Q 001366 724 DLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKI 803 (1092)
Q Consensus 724 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I 803 (1092)
..+++|.+.+.++.+...+...-..++..|+++++|++..-.. ..+....|.+.|++++|.+|+..++++|.|+.+
T Consensus 141 h~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~t----cl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi 216 (775)
T KOG0319|consen 141 HSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRT----CLHTMILHKSAVTSLAFSEDSLELLSVGRDKVI 216 (775)
T ss_pred EEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCch----HHHHHHhhhhheeeeeeccCCceEEEeccCcEE
Confidence 4578888888887765555443345777999999999874222 223466899999999999999999999999999
Q ss_pred EEEEcCCCCC-----------------C----------------------------------C----ccc----------
Q 001366 804 KIFEFNALFN-----------------D----------------------------------S----VDV---------- 818 (1092)
Q Consensus 804 ~Iwd~~~~~~-----------------~----------------------------------~----~~~---------- 818 (1092)
.|||+..... + . .+.
T Consensus 217 ~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~ 296 (775)
T KOG0319|consen 217 IVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQL 296 (775)
T ss_pred EEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCce
Confidence 9998642100 0 0 000
Q ss_pred -----------------ccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEec
Q 001366 819 -----------------YYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQ 881 (1092)
Q Consensus 819 -----------------~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp 881 (1092)
.......+....|.+++|-....++||.++..+.+|++++.+..+. .+.+|+..|.+++...
T Consensus 297 l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~ 375 (775)
T KOG0319|consen 297 LLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWS 375 (775)
T ss_pred EEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCchhheeeeeecc
Confidence 0000011223457788865444789999999999999998877666 8889999999999444
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCce----eeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCc----ceE-
Q 001366 882 VHPTKLASGSDDCSVKLWNINEKNS----LATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA----PWC- 951 (1092)
Q Consensus 882 ~~~~~laSgs~Dg~I~iWDl~~~~~----l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~----~~~- 951 (1092)
.+.+|+|||.|+++++|.++.+.. +.... |...|.+|+++..+..+|+++|.|+++++|++...+. ...
T Consensus 376 -~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~ 454 (775)
T KOG0319|consen 376 -SGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLT 454 (775)
T ss_pred -cCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceeh
Confidence 567999999999999998854432 22222 6778999999888888999999999999999987321 111
Q ss_pred ---EecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecC
Q 001366 952 ---VLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSES 1027 (1092)
Q Consensus 952 ---~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~D 1027 (1092)
+...|.+.|.+|+.+ ++..++|||.|.+.+||++. ......++.||+..|++|.|+|.++.+|++|.|
T Consensus 455 ~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le--------~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD 526 (775)
T KOG0319|consen 455 CRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLE--------QLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGD 526 (775)
T ss_pred hhHHHHhhcccccceEecCCCceEEecccccceeeeccc--------CceEEEEeeCCccceEEEEeccccceeEeccCC
Confidence 346799999999999 66788999999999999998 456788999999999999999999999999999
Q ss_pred CcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1028 NEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1028 g~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
++|+||.+++..++.++ .+|...|..+.|-.++..|++|++||.|++|++
T Consensus 527 ~TvKIW~is~fSClkT~--------------eGH~~aVlra~F~~~~~qliS~~adGliKlWni 576 (775)
T KOG0319|consen 527 KTVKIWSISTFSCLKTF--------------EGHTSAVLRASFIRNGKQLISAGADGLIKLWNI 576 (775)
T ss_pred ceEEEEEeccceeeeee--------------cCccceeEeeeeeeCCcEEEeccCCCcEEEEec
Confidence 99999999988877765 588999999999999999999999999999986
No 77
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.97 E-value=8.5e-31 Score=296.59 Aligned_cols=244 Identities=16% Similarity=0.208 Sum_probs=173.3
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
++.|.||++... ..+..++.|+..............++...++..+|||++.+.+....+...+
T Consensus 16 G~~g~V~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~------------ 79 (303)
T cd07869 16 GSYATVYKGKSK----VNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLT------------ 79 (303)
T ss_pred cCCEEEEEEEEC----CCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEE------------
Confidence 367999999873 2245556655432222222334456777788889999997665544332222
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
.+|||+. ++|.+++......++..++..++.||+.||+|||++||+||||||+|||++.++.+|++|||+++...
T Consensus 80 ----lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 154 (303)
T cd07869 80 ----LVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKS 154 (303)
T ss_pred ----EEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceecc
Confidence 3799985 68888887665567777999999999999999999999999999999999999999999999886532
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
..
T Consensus 155 ~~------------------------------------------------------------------------------ 156 (303)
T cd07869 155 VP------------------------------------------------------------------------------ 156 (303)
T ss_pred CC------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHHHH
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALA 536 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~~~ 536 (1092)
........||++|+|||++.+ ..++.++|||||||+||||++| |.+.....
T Consensus 157 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~ 211 (303)
T cd07869 157 -------------------------SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ 211 (303)
T ss_pred -------------------------CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH
Confidence 000113467899999999876 4589999999999999999986 44322211
Q ss_pred HH----HHhcccc-------------CCCCCC--------------CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 537 AA----MSDLRDR-------------ILPPSF--------------LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 537 ~~----~~~~~~~-------------~~p~~~--------------~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
.. ...+... ..+..+ ...++.+.+|+.+||++||.+|||+.|+|+||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f 291 (303)
T cd07869 212 DQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYF 291 (303)
T ss_pred HHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCccc
Confidence 11 1110000 000000 1123567899999999999999999999999999
Q ss_pred hhh
Q 001366 586 NEF 588 (1092)
Q Consensus 586 ~~~ 588 (1092)
...
T Consensus 292 ~~~ 294 (303)
T cd07869 292 SDL 294 (303)
T ss_pred ccC
Confidence 875
No 78
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.9e-31 Score=295.74 Aligned_cols=249 Identities=14% Similarity=0.149 Sum_probs=184.2
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
+.|...|+ .+|.|||+... +..-.++.|+.-......-....+ +.-+|+...||+|+.++.+.-|+..+.
T Consensus 34 WeIiGELGDGAFGKVyKA~nk----et~~lAAaKvIetkseEELEDylV-EIeILa~CdHP~ivkLl~ayy~enkLw--- 105 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNK----ETKLLAAAKVIETKSEEELEDYLV-EIEILAECDHPVIVKLLSAYYFENKLW--- 105 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcc----cchhhhhhhhhcccchhHHhhhhh-hhhhhhcCCChHHHHHHHHHhccCceE---
Confidence 34455554 58999999984 323333444432222211111122 234678889999998877755544444
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
.+.|||.||-....+-.-++.+.+.++..+++|+|+||.|||+++|||||||..|||++-+|.|+++
T Consensus 106 -------------iliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLA 172 (1187)
T KOG0579|consen 106 -------------ILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLA 172 (1187)
T ss_pred -------------EEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeee
Confidence 4899999999999998888999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||++-.....
T Consensus 173 DFGVSAKn~~t--------------------------------------------------------------------- 183 (1187)
T KOG0579|consen 173 DFGVSAKNKST--------------------------------------------------------------------- 183 (1187)
T ss_pred cccccccchhH---------------------------------------------------------------------
Confidence 99987542200
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-----CCCCccccchhhhHHHHHHc
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----GVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----~~~t~~sDIwSLGvll~ell 526 (1092)
...-.+++|||+|||||+... .+|++++||||||++|.||.
T Consensus 184 ----------------------------------~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMA 229 (1187)
T KOG0579|consen 184 ----------------------------------RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMA 229 (1187)
T ss_pred ----------------------------------HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHh
Confidence 000116799999999999764 78999999999999999999
Q ss_pred CCCCcHHH---HHHHHHhccccCCCCCCC---CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 527 GRFDSERA---LAAAMSDLRDRILPPSFL---SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 527 ~~f~~~~~---~~~~~~~~~~~~~p~~~~---~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
-.-++..+ ...+++..+. -||.++ ..+..+.+|+.+||.+||..||++++||+|||+...
T Consensus 230 qiEPPHhelnpMRVllKiaKS--ePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~ 295 (1187)
T KOG0579|consen 230 QIEPPHHELNPMRVLLKIAKS--EPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA 295 (1187)
T ss_pred ccCCCccccchHHHHHHHhhc--CCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence 75333332 2222333222 233332 335779999999999999999999999999999764
No 79
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.97 E-value=1.1e-30 Score=298.78 Aligned_cols=242 Identities=15% Similarity=0.160 Sum_probs=179.5
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++.... .+..++.|+...... ........++..++...+|||++.+......+...+
T Consensus 5 ~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~--------- 71 (323)
T cd05595 5 KGTFGKVILVREKA----TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC--------- 71 (323)
T ss_pred eCCCEEEEEEEECC----CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEE---------
Confidence 46789999887522 244555555422211 112223345667788889999998776655444333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++|||++|++|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++.+|++|||+++
T Consensus 72 -------lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~ 143 (323)
T cd05595 72 -------FVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK 143 (323)
T ss_pred -------EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhc
Confidence 3899999999999997654 56777999999999999999999999999999999999999999999999876
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.....
T Consensus 144 ~~~~~--------------------------------------------------------------------------- 148 (323)
T cd05595 144 EGISD--------------------------------------------------------------------------- 148 (323)
T ss_pred cccCC---------------------------------------------------------------------------
Confidence 52200
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
........||+.|+|||.+.+..++.++|||||||+||||+++ |.....
T Consensus 149 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~ 200 (323)
T cd05595 149 ----------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 200 (323)
T ss_pred ----------------------------CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH
Confidence 0001135689999999999999999999999999999999986 433322
Q ss_pred HHHHHHhcccc-CCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 535 LAAAMSDLRDR-ILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 535 ~~~~~~~~~~~-~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
........... .+|. ..++.+.+|+.+||.+||.+|| ++.++++|+||...
T Consensus 201 ~~~~~~~~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 201 ERLFELILMEEIRFPR---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred HHHHHHHhcCCCCCCC---CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 22222222221 2222 3478899999999999999998 89999999999764
No 80
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.97 E-value=1.3e-30 Score=298.65 Aligned_cols=242 Identities=15% Similarity=0.133 Sum_probs=179.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.++.|.||++.... .+..++.|+...... ........++..++....|||++.+......+...+
T Consensus 5 ~G~~g~Vy~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~--------- 71 (328)
T cd05593 5 KGTFGKVILVREKA----SGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLC--------- 71 (328)
T ss_pred eCCCEEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEE---------
Confidence 46789999887522 245556655432211 112233455667788889999998766554433333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++|||++|++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus 72 -------lv~Ey~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~ 143 (328)
T cd05593 72 -------FVMEYVNGGELFFHLSRER-VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCK 143 (328)
T ss_pred -------EEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCc
Confidence 3899999999999997654 57777999999999999999999999999999999999999999999999876
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.....
T Consensus 144 ~~~~~--------------------------------------------------------------------------- 148 (328)
T cd05593 144 EGITD--------------------------------------------------------------------------- 148 (328)
T ss_pred cCCCc---------------------------------------------------------------------------
Confidence 52200
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
.......+||+.|+|||.+.+..++.++|||||||+||||+++ |.....
T Consensus 149 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~ 200 (328)
T cd05593 149 ----------------------------AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 200 (328)
T ss_pred ----------------------------ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH
Confidence 0001135689999999999998999999999999999999986 433322
Q ss_pred HHHHHHhcccc-CCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 535 LAAAMSDLRDR-ILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 535 ~~~~~~~~~~~-~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
........... .+| ...++++.+|+.+||.+||.+|| ++.+|++||||...
T Consensus 201 ~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 201 EKLFELILMEDIKFP---RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred HHHHHHhccCCccCC---CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 22222222221 222 24578899999999999999997 89999999999763
No 81
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.97 E-value=9.7e-31 Score=294.49 Aligned_cols=239 Identities=13% Similarity=0.092 Sum_probs=176.5
Q ss_pred cccceeeeCCCCCccccccccccccccccccC-ch-hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
++.|.||++.... .++.++.|+...... .. ......++..++...+|||++.++.....+...+
T Consensus 12 G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~---------- 77 (291)
T cd05612 12 GTFGRVHLVRDRI----SEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLY---------- 77 (291)
T ss_pred CCCeEEEEEEEcC----CCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEE----------
Confidence 4679999998632 244555555422111 11 1222344566788889999998665433222222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+|||+.|++|.+++...+ .++...++.++.||+.||+|||++||+||||||+|||++.++.+|++|||+++.
T Consensus 78 ------lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~ 150 (291)
T cd05612 78 ------MLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKK 150 (291)
T ss_pred ------EEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchh
Confidence 3899999999999997765 467778999999999999999999999999999999999999999999998765
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
....
T Consensus 151 ~~~~---------------------------------------------------------------------------- 154 (291)
T cd05612 151 LRDR---------------------------------------------------------------------------- 154 (291)
T ss_pred ccCC----------------------------------------------------------------------------
Confidence 3310
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
....+||+.|+|||++.+..++.++|||||||+||||+++ |......
T Consensus 155 ------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~ 204 (291)
T cd05612 155 ------------------------------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF 204 (291)
T ss_pred ------------------------------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 0034688999999999998899999999999999999986 4443332
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEF 588 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-----a~eiL~~~~~~~~ 588 (1092)
............. ....++.+.+|+.+||..||.+||+ +.++++||||...
T Consensus 205 ~~~~~i~~~~~~~--~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 205 GIYEKILAGKLEF--PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred HHHHHHHhCCcCC--CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 2222222222211 1233788999999999999999995 9999999999764
No 82
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.97 E-value=1.4e-30 Score=297.52 Aligned_cols=243 Identities=16% Similarity=0.144 Sum_probs=177.5
Q ss_pred ccccceeeeCCCCCcccccccccccccccccc--CchhhHhhhhhhhhhcc-CCCCCCCccccceecCCCCCCCccCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTT--MPSDAALKAAGAMMVAS-NASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
.++.|.||++...+ .+..++.|+..... ..........+..++.. ..||+++.++.........+
T Consensus 5 ~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~-------- 72 (320)
T cd05590 5 KGSFGKVMLARLKE----SGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLF-------- 72 (320)
T ss_pred eCCCeEEEEEEEcC----CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEE--------
Confidence 46789999997632 24455665542211 11122333344444443 47999998766644333333
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
++|||++|++|.+++...+ .++...++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 73 --------iv~Ey~~~g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~ 143 (320)
T cd05590 73 --------FVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMC 143 (320)
T ss_pred --------EEEcCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCC
Confidence 3899999999999997664 4777799999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.....
T Consensus 144 ~~~~~~-------------------------------------------------------------------------- 149 (320)
T cd05590 144 KEGIFN-------------------------------------------------------------------------- 149 (320)
T ss_pred eecCcC--------------------------------------------------------------------------
Confidence 652200
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
........||+.|+|||++.+..++.++|||||||++|||+++ |....
T Consensus 150 -----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 200 (320)
T cd05590 150 -----------------------------GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN 200 (320)
T ss_pred -----------------------------CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 0001135689999999999998999999999999999999986 44443
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH------HHHhhhhhhhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT------REILQSEVTNEF 588 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa------~eiL~~~~~~~~ 588 (1092)
...............| ...++.+.+|+.+||++||.+||++ .+++.||||...
T Consensus 201 ~~~~~~~i~~~~~~~~--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 201 EDDLFEAILNDEVVYP--TWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred HHHHHHHHhcCCCCCC--CCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 3333333333322222 2357889999999999999999998 999999999763
No 83
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.97 E-value=2.2e-30 Score=299.86 Aligned_cols=252 Identities=17% Similarity=0.156 Sum_probs=181.8
Q ss_pred CchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 210 GFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 210 ~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
.|.+|.+.+.++ |.|.||++... ..+..++.|+..............++..++...+|+|++.+++....+...
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 147 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHR----PTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEI 147 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEEC----CCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeE
Confidence 566676655554 78999999752 224556666653332222233445667778888999999876654333222
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~ 367 (1092)
+ .+|||++|++|.+.. ...+..+..+++||+.||+|||++||+||||||+|||++.++.
T Consensus 148 ~----------------lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~ 206 (353)
T PLN00034 148 Q----------------VLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKN 206 (353)
T ss_pred E----------------EEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC
Confidence 2 389999999997532 3456678899999999999999999999999999999999999
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+||+|||+++.+....
T Consensus 207 ~kL~DfG~~~~~~~~~---------------------------------------------------------------- 222 (353)
T PLN00034 207 VKIADFGVSRILAQTM---------------------------------------------------------------- 222 (353)
T ss_pred EEEcccccceeccccc----------------------------------------------------------------
Confidence 9999999887643100
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-----CCCCccccchhhhHHH
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----GVCTTSSNIYSLGVLF 522 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----~~~t~~sDIwSLGvll 522 (1092)
......+||..|+|||.+.. ...+.++|||||||+|
T Consensus 223 ---------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil 263 (353)
T PLN00034 223 ---------------------------------------DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSI 263 (353)
T ss_pred ---------------------------------------ccccccccCccccCccccccccccCcCCCcchhHHHHHHHH
Confidence 00113468999999998853 2346799999999999
Q ss_pred HHHcCC---CCc--HHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 523 FELFGR---FDS--ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 523 ~ell~~---f~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
|||+++ |.. ..+....+..+.....+......++++.+||.+||+.||++||++.|||+||||....
T Consensus 264 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 264 LEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred HHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 999986 431 1122222333333333334445678899999999999999999999999999998753
No 84
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=1.7e-29 Score=258.24 Aligned_cols=244 Identities=24% Similarity=0.423 Sum_probs=214.1
Q ss_pred CCCCEEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEE
Q 001366 778 SANVICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLW 856 (1092)
Q Consensus 778 h~~~V~sl~fspd-g~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IW 856 (1092)
-.+.++.++|+++ .+.+++++.||+++|||.... .......+.|...|.++.|++..+..++++|+|++|+||
T Consensus 59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~------s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW 132 (311)
T KOG0277|consen 59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMP------SKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLW 132 (311)
T ss_pred cccceeEeeecCCCcceEEEEecCceEEEeccCCC------CcchhHHHhhhhheEEeccccccceeEEeeccCCceEee
Confidence 4668899999986 458889999999999996531 122334567999999999999878899999999999999
Q ss_pred ECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECC
Q 001366 857 DACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSAD 935 (1092)
Q Consensus 857 D~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~D 935 (1092)
+....+.+.+|.+|...|....|+|..+++++++|.|+++++||++.......+. |...+.|+.|+....++++||+.|
T Consensus 133 ~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd 212 (311)
T KOG0277|consen 133 DPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVD 212 (311)
T ss_pred cCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCC
Confidence 9999999999999999999999999999999999999999999998654433455 667999999999888999999999
Q ss_pred CeEEEEEcCCCCcceEEecCCCCCeEEEEEcC--CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEE
Q 001366 936 YRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD--SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVG 1013 (1092)
Q Consensus 936 g~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~--~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~ 1013 (1092)
+.|++||+|+.+.++..+.+|.-+|+.|+|+| ...|+|++.|-+++|||.... ..++.++..|+.-+..+.
T Consensus 213 ~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~-------ds~~e~~~~HtEFv~g~D 285 (311)
T KOG0277|consen 213 NLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQ-------DSAIETVDHHTEFVCGLD 285 (311)
T ss_pred ceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccc-------hhhhhhhhccceEEeccc
Confidence 99999999999999999999999999999984 457999999999999998743 345667778999999999
Q ss_pred EecC-CCEEEEEecCCcEEEEe
Q 001366 1014 LSTA-DGYIACGSESNEVYAYH 1034 (1092)
Q Consensus 1014 ~spd-g~~lasgs~Dg~I~Iwd 1034 (1092)
||+. +.++|+++.|..++||+
T Consensus 286 ws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 286 WSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred cccccCceeeecccccceeeec
Confidence 9985 67999999999999997
No 85
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=2.1e-30 Score=303.71 Aligned_cols=248 Identities=15% Similarity=0.097 Sum_probs=175.9
Q ss_pred HHHhhh--ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTT--LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~--~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+. .+|.|+||++.... .++.++.|+. ......++..++...+||||+.+.+...++...+
T Consensus 94 y~~~~~lg~G~~g~V~~~~d~~----~~~~vaiK~~-------~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~--- 159 (391)
T PHA03212 94 FSILETFTPGAEGFAFACIDNK----TCEHVVIKAG-------QRGGTATEAHILRAINHPSIIQLKGTFTYNKFTC--- 159 (391)
T ss_pred cEEEEEEcCCCCeEEEEEEECC----CCCEEEEech-------hhhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeE---
Confidence 444443 34789999997632 3444555432 1122356677888999999999877655443333
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
.+|+++. ++|.+++.... .++..+++.|++||+.||+|||++||+||||||+|||++..+.+||+
T Consensus 160 -------------lv~e~~~-~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~ 224 (391)
T PHA03212 160 -------------LILPRYK-TDLYCYLAAKR-NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLG 224 (391)
T ss_pred -------------EEEecCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEE
Confidence 2677774 78999987654 46777899999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++......
T Consensus 225 DFG~a~~~~~~~-------------------------------------------------------------------- 236 (391)
T PHA03212 225 DFGAACFPVDIN-------------------------------------------------------------------- 236 (391)
T ss_pred eCCccccccccc--------------------------------------------------------------------
Confidence 999886432100
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCc
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS 531 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~ 531 (1092)
.......+||+.|+|||++.+..++.++|||||||+||||+++..+
T Consensus 237 ----------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p 282 (391)
T PHA03212 237 ----------------------------------ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDS 282 (391)
T ss_pred ----------------------------------ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 0001145799999999999999999999999999999999986211
Q ss_pred ---H----------HHHHHHHHhc----------------------cc--cCCCC------CCCCCChhHHHHHHhcccc
Q 001366 532 ---E----------RALAAAMSDL----------------------RD--RILPP------SFLSENPKEAGFCLWQLHP 568 (1092)
Q Consensus 532 ---~----------~~~~~~~~~~----------------------~~--~~~p~------~~~~~~~~~~~li~~lL~~ 568 (1092)
. ......+..+ .. ...|. .....+.++.+|+.+||++
T Consensus 283 ~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~ 362 (391)
T PHA03212 283 LFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAF 362 (391)
T ss_pred cCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcC
Confidence 0 0111111000 00 00000 0112345678999999999
Q ss_pred CCCCCCCHHHHhhhhhhhhhhccc
Q 001366 569 EPLSRPTTREILQSEVTNEFQEVC 592 (1092)
Q Consensus 569 dP~~Rpsa~eiL~~~~~~~~~~~~ 592 (1092)
||.+|||+.|+|+||||.....+.
T Consensus 363 dP~~Rpta~elL~hp~f~~~~~~~ 386 (391)
T PHA03212 363 DAHHRPSAEALLDFAAFQDIPDPY 386 (391)
T ss_pred ChhhCCCHHHHhcChhhccCCCCC
Confidence 999999999999999998765443
No 86
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.4e-30 Score=269.44 Aligned_cols=206 Identities=15% Similarity=0.150 Sum_probs=168.7
Q ss_pred hhhhhccC-CCCCCCccccceecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHH
Q 001366 262 GAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVA 340 (1092)
Q Consensus 262 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~ 340 (1092)
+...++.. -||+|+.+.+.-.++.... .+.+.|.-|.|.|+|...- .+++++.+.|++||++
T Consensus 72 Ev~ILRqv~GHP~II~l~D~yes~sF~F----------------lVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfe 134 (411)
T KOG0599|consen 72 EISILRQVMGHPYIIDLQDVYESDAFVF----------------LVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFE 134 (411)
T ss_pred HHHHHHHhcCCCcEEEeeeeccCcchhh----------------hhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHH
Confidence 33445544 8999998877755555544 2678899999999998764 4667799999999999
Q ss_pred HHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccC
Q 001366 341 LVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1092)
Q Consensus 341 ~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (1092)
||+|+|.++||||||||+|||++++.++||+|||.+..+..
T Consensus 135 gVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~--------------------------------------- 175 (411)
T KOG0599|consen 135 GVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEP--------------------------------------- 175 (411)
T ss_pred HHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCC---------------------------------------
Confidence 99999999999999999999999999999999999877541
Q ss_pred cccccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccC
Q 001366 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1092)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 500 (1092)
-..+...||||.|.|
T Consensus 176 -----------------------------------------------------------------GekLrelCGTPgYLA 190 (411)
T KOG0599|consen 176 -----------------------------------------------------------------GEKLRELCGTPGYLA 190 (411)
T ss_pred -----------------------------------------------------------------chhHHHhcCCCcccC
Confidence 123447899999999
Q ss_pred cccccC------CCCCccccchhhhHHHHHHcCCCCcHHHHHHHHH--hc---cccCCCCCCCCCChhHHHHHHhccccC
Q 001366 501 PEELSG------GVCTTSSNIYSLGVLFFELFGRFDSERALAAAMS--DL---RDRILPPSFLSENPKEAGFCLWQLHPE 569 (1092)
Q Consensus 501 PE~l~~------~~~t~~sDIwSLGvll~ell~~f~~~~~~~~~~~--~~---~~~~~p~~~~~~~~~~~~li~~lL~~d 569 (1092)
||.+.. ..|+..+|+||+|||+|.||.|.+++-+..+.+. .+ +...-.|.+.+.+....+||.+||+.|
T Consensus 191 PEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVd 270 (411)
T KOG0599|consen 191 PETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVD 270 (411)
T ss_pred hhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeC
Confidence 999864 3488999999999999999998777665555432 12 223345788888899999999999999
Q ss_pred CCCCCCHHHHhhhhhhhhh
Q 001366 570 PLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 570 P~~Rpsa~eiL~~~~~~~~ 588 (1092)
|.+|.|+.|+|.||||...
T Consensus 271 p~~Ritake~LaHpff~q~ 289 (411)
T KOG0599|consen 271 PTKRITAKEALAHPFFIQI 289 (411)
T ss_pred chhcccHHHHhcChHHHHH
Confidence 9999999999999999764
No 87
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=4e-30 Score=309.35 Aligned_cols=253 Identities=19% Similarity=0.157 Sum_probs=186.7
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+...+ +|.|+||++.... .. +..++.|.. ..+.........++..++....||||+.+++....+...+
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~--~~-~~~vv~K~~-~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~--- 141 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGS--DP-KEKVVAKFV-MLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLL--- 141 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcC--CC-CeEEEEEEc-ccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEE---
Confidence 5555554 4789999997632 11 233344322 2222223334455777888999999999887766544444
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~---~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
++|||++||+|.++|... ...++..++..++.||+.||+|||++||+||||||+|||++.++.+
T Consensus 142 -------------lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~ 208 (478)
T PTZ00267 142 -------------LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGII 208 (478)
T ss_pred -------------EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcE
Confidence 389999999999988542 3357788999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++.+.....
T Consensus 209 kL~DFgla~~~~~~~~---------------------------------------------------------------- 224 (478)
T PTZ00267 209 KLGDFGFSKQYSDSVS---------------------------------------------------------------- 224 (478)
T ss_pred EEEeCcCceecCCccc----------------------------------------------------------------
Confidence 9999999876431000
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~ 528 (1092)
.......+||+.|+|||++.+..++.++|||||||+||||+++
T Consensus 225 -------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg 267 (478)
T PTZ00267 225 -------------------------------------LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTL 267 (478)
T ss_pred -------------------------------------cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhC
Confidence 0001145799999999999999999999999999999999986
Q ss_pred ---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|........ +..+.....++.....++.+.+|+.+||+++|.+||++.++|.|+|+...
T Consensus 268 ~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 268 HRPFKGPSQREI-MQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred CCCCCCCCHHHH-HHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 443333222 22222222333334567889999999999999999999999999999653
No 88
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.97 E-value=4.3e-30 Score=295.03 Aligned_cols=253 Identities=17% Similarity=0.239 Sum_probs=177.9
Q ss_pred cccceeeeCCCCCccccccccccccccccc-cCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTT-TMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
++.|.||+|.... .+..++.|+.... ....+.....++..++...+|||++.+........... .
T Consensus 11 G~~g~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~------~---- 76 (338)
T cd07859 11 GSYGVVCSAIDTH----TGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE------F---- 76 (338)
T ss_pred cCCeEEEEEEECC----CCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCC------C----
Confidence 5789999998632 2445555543211 11223334456777888899999998766543222111 0
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
...-++||||. ++|.+++...+ .++...++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 77 -~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 77 -KDIYVVFELME-SDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred -ceEEEEEecCC-CCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 00124799995 68999997654 4777799999999999999999999999999999999999999999999998754
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
......
T Consensus 154 ~~~~~~-------------------------------------------------------------------------- 159 (338)
T cd07859 154 FNDTPT-------------------------------------------------------------------------- 159 (338)
T ss_pred ccccCc--------------------------------------------------------------------------
Confidence 310000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC--CCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~--~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
.......+||++|+|||++.+ ..++.++|||||||++|||++| |.....
T Consensus 160 --------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~ 213 (338)
T cd07859 160 --------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV 213 (338)
T ss_pred --------------------------cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh
Confidence 000124578999999999876 6789999999999999999986 433221
Q ss_pred HHH--H------------------------HHhcccc---CCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 535 LAA--A------------------------MSDLRDR---ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 535 ~~~--~------------------------~~~~~~~---~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
... . +..+... .+...++..++.+.+|+.+||++||++|||+.|+|+||||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f 293 (338)
T cd07859 214 VHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYF 293 (338)
T ss_pred HHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchh
Confidence 111 0 0111111 1112244567888999999999999999999999999999
Q ss_pred hhhhc
Q 001366 586 NEFQE 590 (1092)
Q Consensus 586 ~~~~~ 590 (1092)
.....
T Consensus 294 ~~~~~ 298 (338)
T cd07859 294 KGLAK 298 (338)
T ss_pred hhcCc
Confidence 87544
No 89
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.97 E-value=3e-30 Score=295.08 Aligned_cols=246 Identities=20% Similarity=0.189 Sum_probs=179.3
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC---chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM---PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
.+|.|.||++....+.. .+..++.|+...... .........+..++...+|||++.++.....+...+
T Consensus 6 ~G~~g~V~~~~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~-------- 76 (323)
T cd05584 6 KGGYGKVFQVRKVTGAD-TGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLY-------- 76 (323)
T ss_pred ecCCeEEEEEEEcccCC-CCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEE--------
Confidence 46889999976532111 244555555432111 111122334556788889999998766654433333
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
.+|||+.|++|.++++..+. +....+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 77 --------lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 77 --------LILEYLSGGELFMHLEREGI-FMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred --------EEEeCCCCchHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCC
Confidence 38999999999999977654 566688999999999999999999999999999999999999999999988
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+......
T Consensus 148 ~~~~~~~------------------------------------------------------------------------- 154 (323)
T cd05584 148 KESIHEG------------------------------------------------------------------------- 154 (323)
T ss_pred eecccCC-------------------------------------------------------------------------
Confidence 6532100
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
.......||+.|+|||++.+..++.++|||||||+||||++| |....
T Consensus 155 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~ 204 (323)
T cd05584 155 ------------------------------TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN 204 (323)
T ss_pred ------------------------------CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC
Confidence 000134689999999999998899999999999999999986 44433
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
............. +.....++.+.+|+.+||+++|++|| ++.++++||||...
T Consensus 205 ~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 205 RKKTIDKILKGKL--NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred HHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 3332222222221 11223478899999999999999999 89999999999753
No 90
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.97 E-value=2.3e-30 Score=295.73 Aligned_cols=243 Identities=17% Similarity=0.139 Sum_probs=178.5
Q ss_pred hccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhc-cCCCCCCCccccceecCCCCCCCccCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVA-SNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
..++.|.||+|...+ .+..++.|++..... .........+..++. ...||+++.++.....+...+
T Consensus 4 G~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~------- 72 (321)
T cd05591 4 GKGSFGKVMLAELKG----TDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLF------- 72 (321)
T ss_pred ccCCCeEEEEEEECC----CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEE-------
Confidence 346789999997632 245566665532211 111222333344444 348999988776655443333
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
++|||++|++|.+++...+ .++...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 73 ---------lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~ 142 (321)
T cd05591 73 ---------FVMEYVNGGDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGM 142 (321)
T ss_pred ---------EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeeccc
Confidence 3899999999999997654 467778999999999999999999999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++......
T Consensus 143 ~~~~~~~~------------------------------------------------------------------------ 150 (321)
T cd05591 143 CKEGILNG------------------------------------------------------------------------ 150 (321)
T ss_pred ceecccCC------------------------------------------------------------------------
Confidence 76522000
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcH
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
.......||+.|+|||++.+..++.++|||||||++|||++| |...
T Consensus 151 -------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~ 199 (321)
T cd05591 151 -------------------------------VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEAD 199 (321)
T ss_pred -------------------------------ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCC
Confidence 001135689999999999998999999999999999999986 5444
Q ss_pred HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC-------CHHHHhhhhhhhh
Q 001366 533 RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-------TTREILQSEVTNE 587 (1092)
Q Consensus 533 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-------sa~eiL~~~~~~~ 587 (1092)
................|. ..++++.+|+.+||++||.+|| ++.++++||||..
T Consensus 200 ~~~~~~~~i~~~~~~~p~--~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 200 NEDDLFESILHDDVLYPV--WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred CHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 443333333333332232 2468889999999999999999 8999999999965
No 91
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.96 E-value=1.4e-27 Score=264.86 Aligned_cols=296 Identities=19% Similarity=0.278 Sum_probs=232.1
Q ss_pred eeecCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCC
Q 001366 773 GEFNNSANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG 851 (1092)
Q Consensus 773 ~~l~~h~~~V~sl~fspdg~-~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dg 851 (1092)
+.+.+|+..|++++|-|.-. .++|||.|++|.+|+=.. ..+......|..-|.|+.|+|| +.+++|++.||
T Consensus 141 Gei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPP-------FKFk~s~r~HskFV~~VRysPD-G~~Fat~gsDg 212 (603)
T KOG0318|consen 141 GEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPP-------FKFKSSFREHSKFVNCVRYSPD-GSRFATAGSDG 212 (603)
T ss_pred ceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCC-------eeeeecccccccceeeEEECCC-CCeEEEecCCc
Confidence 46779999999999998765 799999999999998442 2333344558888999999999 99999999999
Q ss_pred cEEEEECCCCceEEEee---ccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-----------------
Q 001366 852 VVKLWDACTGQTVSHYI---EHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK----------------- 911 (1092)
Q Consensus 852 tV~IWD~~tg~~i~~l~---~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~----------------- 911 (1092)
+|.|||-.+|+.+..+. +|.+.|.+++|+| |++.++|+|.|.++||||+.+.+++.++.
T Consensus 213 ki~iyDGktge~vg~l~~~~aHkGsIfalsWsP-Ds~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd 291 (603)
T KOG0318|consen 213 KIYIYDGKTGEKVGELEDSDAHKGSIFALSWSP-DSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKD 291 (603)
T ss_pred cEEEEcCCCccEEEEecCCCCccccEEEEEECC-CCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCC
Confidence 99999999999999998 8999999999999 99999999999999999998865544331
Q ss_pred ---------------------------cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEE
Q 001366 912 ---------------------------NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVK 964 (1092)
Q Consensus 912 ---------------------------~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~ 964 (1092)
|...|+++..+|++. +|++|+.||.|.-||..++..-...-.+|...|.+++
T Consensus 292 ~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~-~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~ 370 (603)
T KOG0318|consen 292 HLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGK-TIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMA 370 (603)
T ss_pred eEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCC-EEEeeccCceEEEEecCCccccccccccccceEEEEe
Confidence 334689999999994 9999999999999999877543222256776676666
Q ss_pred EcCCCEEEEEECCCeEEEEEcCCCCCCC---------C------------------------------------------
Q 001366 965 FLDSGTLVTASTDNKLKLWDLKRTSHTG---------P------------------------------------------ 993 (1092)
Q Consensus 965 fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~---------~------------------------------------------ 993 (1092)
-+..+.+++.+.|.+|++.++....... +
T Consensus 371 ~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vA 450 (603)
T KOG0318|consen 371 ASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVA 450 (603)
T ss_pred ecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEE
Confidence 6555566666666666666553110000 0
Q ss_pred ---------------------C---CCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeecccc
Q 001366 994 ---------------------S---TNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSI 1049 (1092)
Q Consensus 994 ---------------------~---~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~ 1049 (1092)
. .......+..|..+|+++++|||+.|||+|...+.|.+|++.+.+... .
T Consensus 451 v~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~-~----- 524 (603)
T KOG0318|consen 451 VSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKT-N----- 524 (603)
T ss_pred EcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceec-c-----
Confidence 0 001112334578889999999999999999999999999988766521 1
Q ss_pred CCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1050 DPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1050 ~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
...-|...|++|+|+|+..+||||+-|-+|.||.+
T Consensus 525 -------~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv 559 (603)
T KOG0318|consen 525 -------RWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSV 559 (603)
T ss_pred -------eeeeeeeeEEEEEeCCCceEEEeccccceEEEEEc
Confidence 12347889999999999999999999999999986
No 92
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.96 E-value=2.4e-30 Score=298.93 Aligned_cols=273 Identities=16% Similarity=0.118 Sum_probs=185.6
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++.... .+..++.|+...... .........+..++...+||+++.++.....+...+
T Consensus 11 ~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~--------- 77 (350)
T cd05573 11 RGAFGEVWLVRDKD----TGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLY--------- 77 (350)
T ss_pred eCCcEEEEEEEECC----CCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEE---------
Confidence 35789999998732 245566655432211 122233445566788889999998766544333222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++|||+.|++|.+++... ..++..+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus 78 -------lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~ 149 (350)
T cd05573 78 -------LVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCK 149 (350)
T ss_pred -------EEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCc
Confidence 389999999999999776 457777999999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+.............. +.... .....
T Consensus 150 ~~~~~~~~~~~~~~~~------------------------------------------------~~~~~-----~~~~~- 175 (350)
T cd05573 150 KMNKAKDREYYLNDSH------------------------------------------------NLLFR-----DNVLV- 175 (350)
T ss_pred cCcccCcccccccccc------------------------------------------------ccccc-----ccccc-
Confidence 7553211100000000 00000 00000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
...............+||+.|+|||.+.+..++.++|||||||+||||+++ |.....
T Consensus 176 --------------------~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 176 --------------------RRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred --------------------cccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 000000011122356799999999999999999999999999999999986 443333
Q ss_pred HHHHHHhcc--ccCCCCCCCCCChhHHHHHHhccccCCCCCCC-HHHHhhhhhhhhh
Q 001366 535 LAAAMSDLR--DRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-TREILQSEVTNEF 588 (1092)
Q Consensus 535 ~~~~~~~~~--~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-a~eiL~~~~~~~~ 588 (1092)
......... .....|.....++.+.+||.+||. +|.+||+ +.++|+||||...
T Consensus 236 ~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 236 QETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred HHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 332222222 222223333468899999999997 9999999 9999999999764
No 93
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.96 E-value=3e-30 Score=294.16 Aligned_cols=244 Identities=18% Similarity=0.151 Sum_probs=175.3
Q ss_pred hccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhh-ccCCCCCCCccccceecCCCCCCCccCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMV-ASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
..++.|+||++...+ .++.++.|+...... .........+...+ ....||+++.++.....+...+
T Consensus 4 G~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~------- 72 (316)
T cd05592 4 GKGSFGKVMLAELKG----TNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLF------- 72 (316)
T ss_pred eeCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEE-------
Confidence 346889999997632 345566655422111 11111122222233 3458999998766544333333
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
.+|||++|++|.++++..+ .++..++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus 73 ---------lv~e~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~ 142 (316)
T cd05592 73 ---------FVMEYLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGM 142 (316)
T ss_pred ---------EEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcC
Confidence 3899999999999997765 467778999999999999999999999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++......
T Consensus 143 a~~~~~~~------------------------------------------------------------------------ 150 (316)
T cd05592 143 CKENMNGE------------------------------------------------------------------------ 150 (316)
T ss_pred CeECCCCC------------------------------------------------------------------------
Confidence 86532000
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcH
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
......+||+.|+|||.+.+..++.++|||||||++|||++| |.+.
T Consensus 151 -------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~ 199 (316)
T cd05592 151 -------------------------------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGE 199 (316)
T ss_pred -------------------------------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCC
Confidence 001145789999999999998999999999999999999986 4443
Q ss_pred HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH-HHHhhhhhhhhh
Q 001366 533 RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-REILQSEVTNEF 588 (1092)
Q Consensus 533 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa-~eiL~~~~~~~~ 588 (1092)
............. +......++++.+|+.+||+.+|.+||++ .++++||||...
T Consensus 200 ~~~~~~~~i~~~~--~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 200 DEDELFDSILNDR--PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred CHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 3322222222221 22223357788999999999999999986 589999999763
No 94
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.96 E-value=1.6e-30 Score=297.62 Aligned_cols=242 Identities=17% Similarity=0.163 Sum_probs=178.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.++.|.||++... ..+..++.|+....... ........+..++...+|||++.+......+...+
T Consensus 5 ~G~~g~V~~~~~~----~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~--------- 71 (325)
T cd05594 5 KGTFGKVILVKEK----ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLC--------- 71 (325)
T ss_pred eCCCEEEEEEEEC----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEE---------
Confidence 4678999988752 12455566554322211 12233445666778889999998766554433333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhh-cCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs-~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
++|||++|++|.+++...+ .++..+++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||++
T Consensus 72 -------lv~E~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~ 143 (325)
T cd05594 72 -------FVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC 143 (325)
T ss_pred -------EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCC
Confidence 3899999999999997654 56777999999999999999997 79999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+......
T Consensus 144 ~~~~~~~------------------------------------------------------------------------- 150 (325)
T cd05594 144 KEGIKDG------------------------------------------------------------------------- 150 (325)
T ss_pred eecCCCC-------------------------------------------------------------------------
Confidence 6532000
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
......+||+.|+|||++.+..++.++|||||||+||||++| |....
T Consensus 151 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~ 200 (325)
T cd05594 151 ------------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 200 (325)
T ss_pred ------------------------------cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC
Confidence 001135689999999999999999999999999999999996 43322
Q ss_pred HHHHHHHhcccc-CCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 534 ALAAAMSDLRDR-ILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 534 ~~~~~~~~~~~~-~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
............ .+| ...++++.+|+.+||.+||.+|+ ++.++++||||...
T Consensus 201 ~~~~~~~i~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 201 HEKLFELILMEEIRFP---RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred HHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 222222112211 122 23578899999999999999997 89999999999764
No 95
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.96 E-value=2.6e-30 Score=290.04 Aligned_cols=245 Identities=14% Similarity=0.166 Sum_probs=177.6
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++... ..+..++.|+...... ........++..++....|++++........+...+
T Consensus 10 ~G~~g~V~~~~~~----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~--------- 76 (285)
T cd05631 10 KGGFGEVCACQVR----ATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALC--------- 76 (285)
T ss_pred cCCCEEEEEEEEe----cCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEE---------
Confidence 3578999998762 2245556554322111 112223445677888889999987655543333222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
.+|||+.|++|.+++... ...++...++.++.||+.||+|||++||+||||||+|||++.++.+|++|||++
T Consensus 77 -------lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~ 149 (285)
T cd05631 77 -------LVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLA 149 (285)
T ss_pred -------EEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 389999999999988643 345788899999999999999999999999999999999999999999999988
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.....
T Consensus 150 ~~~~~~-------------------------------------------------------------------------- 155 (285)
T cd05631 150 VQIPEG-------------------------------------------------------------------------- 155 (285)
T ss_pred EEcCCC--------------------------------------------------------------------------
Confidence 653200
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
......+||..|+|||++.+..++.++|||||||+||||+++ |....
T Consensus 156 ------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~ 205 (285)
T cd05631 156 ------------------------------ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRK 205 (285)
T ss_pred ------------------------------CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCC
Confidence 001134689999999999999999999999999999999986 43321
Q ss_pred H---HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhhh
Q 001366 534 A---LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEFQ 589 (1092)
Q Consensus 534 ~---~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-----a~eiL~~~~~~~~~ 589 (1092)
. .......+.. ...+.....++.+.+|+.+||.+||.+||+ ++++++||||.+..
T Consensus 206 ~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05631 206 ERVKREEVDRRVKE-DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN 268 (285)
T ss_pred cchhHHHHHHHhhc-ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence 1 1111111211 111222345788999999999999999997 89999999998753
No 96
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=2.2e-30 Score=286.55 Aligned_cols=256 Identities=16% Similarity=0.117 Sum_probs=190.8
Q ss_pred hHHHhhhcc-c-cceeeeCCCCCcccccccccccccccccc---------C----chhhHhhhhhhhhhccCCCCCCCcc
Q 001366 213 EFFVKTTLK-G-KGIVCRGPPLNAFKERRGMIDTKAFVTTT---------M----PSDAALKAAGAMMVASNASPKPVGV 277 (1092)
Q Consensus 213 ~~~~~~~~~-g-~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (1092)
+|.+.++++ | .|+|-++.. .+.+..+|.||+.-.- . -.....-.++.+.+....|||++.+
T Consensus 98 qy~l~~eiG~G~yGkVkLar~----~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 98 QYELIKEIGSGQYGKVKLARD----EVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred heehhhhhcCCccceEEEEee----cCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 678877776 2 477766665 2234555555531111 0 1112234456777888999999976
Q ss_pred ccc---eecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccC
Q 001366 278 GTA---VVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLD 354 (1092)
Q Consensus 278 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrD 354 (1092)
++. ...+... .+.|||..|.+.. .-.....+...+++.||+.++.||+|||.|||||||
T Consensus 174 iEvLDDP~s~~~Y-----------------lVley~s~G~v~w-~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRD 235 (576)
T KOG0585|consen 174 IEVLDDPESDKLY-----------------LVLEYCSKGEVKW-CPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRD 235 (576)
T ss_pred EEeecCcccCceE-----------------EEEEeccCCcccc-CCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccc
Confidence 543 2222222 2789999888754 322333378889999999999999999999999999
Q ss_pred CCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCcc
Q 001366 355 LKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKY 434 (1092)
Q Consensus 355 LKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (1092)
|||+|+||+.+|+|||+|||.+........
T Consensus 236 IKPsNLLl~~~g~VKIsDFGVs~~~~~~~~-------------------------------------------------- 265 (576)
T KOG0585|consen 236 IKPSNLLLSSDGTVKISDFGVSNEFPQGSD-------------------------------------------------- 265 (576)
T ss_pred cchhheEEcCCCcEEeeccceeeecccCCc--------------------------------------------------
Confidence 999999999999999999999876541100
Q ss_pred CCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC----CC
Q 001366 435 GNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV----CT 510 (1092)
Q Consensus 435 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~----~t 510 (1092)
+.....+...+|||.|+|||.+.++. .+
T Consensus 266 ------------------------------------------------~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g 297 (576)
T KOG0585|consen 266 ------------------------------------------------EGSDDQLSRTVGTPAFFAPELCSGGNSFSYSG 297 (576)
T ss_pred ------------------------------------------------cccHHHHhhcCCCccccchHhhcCCCCccccc
Confidence 00011123478999999999998833 47
Q ss_pred ccccchhhhHHHHHHcC---CCCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 511 TSSNIYSLGVLFFELFG---RFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 511 ~~sDIwSLGvll~ell~---~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
++.|||||||+||.|+. ||-++......-+++......|..+..++...+||++||++||..|.+..+|..|||...
T Consensus 298 ~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 298 FALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR 377 (576)
T ss_pred hhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence 89999999999999995 588887777777777777777888888999999999999999999999999999999986
Q ss_pred h
Q 001366 588 F 588 (1092)
Q Consensus 588 ~ 588 (1092)
.
T Consensus 378 ~ 378 (576)
T KOG0585|consen 378 D 378 (576)
T ss_pred C
Confidence 5
No 97
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.96 E-value=2.8e-30 Score=294.37 Aligned_cols=243 Identities=17% Similarity=0.147 Sum_probs=175.2
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhc-cCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVA-SNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
.+|.|.||++.... .+..++.|+...... .........+..++. ...||+++.++.....+...+
T Consensus 5 ~G~~g~V~~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~-------- 72 (316)
T cd05620 5 KGSFGKVLLAELKG----KGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLF-------- 72 (316)
T ss_pred eCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEE--------
Confidence 46789999998632 345555555422111 112222333333343 358999998776655444333
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
.+|||+.|++|.+++...+ .++..++..++.||+.||+|||++||+||||||+|||++.++.+|++|||++
T Consensus 73 --------lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~ 143 (316)
T cd05620 73 --------FVMEFLNGGDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMC 143 (316)
T ss_pred --------EEECCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCC
Confidence 3899999999999997754 4677799999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.....
T Consensus 144 ~~~~~~-------------------------------------------------------------------------- 149 (316)
T cd05620 144 KENVFG-------------------------------------------------------------------------- 149 (316)
T ss_pred eecccC--------------------------------------------------------------------------
Confidence 642100
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
.......+||+.|+|||++.+..++.++|||||||+||||+++ |....
T Consensus 150 -----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~ 200 (316)
T cd05620 150 -----------------------------DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD 200 (316)
T ss_pred -----------------------------CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence 0001145789999999999999999999999999999999986 43333
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH-HHHhhhhhhhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-REILQSEVTNEF 588 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa-~eiL~~~~~~~~ 588 (1092)
.. .....+.... +......++++.+|+.+||+.||.+||++ .++++||||...
T Consensus 201 ~~-~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 201 ED-ELFESIRVDT-PHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred HH-HHHHHHHhCC-CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence 22 2222222111 11122357889999999999999999998 589999999764
No 98
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.96 E-value=6.9e-30 Score=269.63 Aligned_cols=271 Identities=18% Similarity=0.333 Sum_probs=229.5
Q ss_pred CCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCccccccee
Q 001366 744 PTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAV 823 (1092)
Q Consensus 744 ~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~ 823 (1092)
.+..+++..|+++++|+...+.+.. .|.+|++.|-|+.|+ .+.+++|+.|.+|+|||+++. .....
T Consensus 207 D~kiVSGlrDnTikiWD~n~~~c~~-----~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tg-------e~l~t 272 (499)
T KOG0281|consen 207 DEKIVSGLRDNTIKIWDKNSLECLK-----ILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTG-------EPLNT 272 (499)
T ss_pred chhhhcccccCceEEeccccHHHHH-----hhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCC-------chhhH
Confidence 3445688999999999987776654 356999999999986 459999999999999999872 23345
Q ss_pred eecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCc---eEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEe
Q 001366 824 EMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ---TVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900 (1092)
Q Consensus 824 ~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~---~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWD 900 (1092)
.+.|...|..+.|+. .+++|||.|.+|.+||+.... +.+.+.||...|+.|+|+. ++++|+|.|.+|++|+
T Consensus 273 lihHceaVLhlrf~n---g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~---kyIVsASgDRTikvW~ 346 (499)
T KOG0281|consen 273 LIHHCEAVLHLRFSN---GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD---KYIVSASGDRTIKVWS 346 (499)
T ss_pred HhhhcceeEEEEEeC---CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecccc---ceEEEecCCceEEEEe
Confidence 667999999999985 599999999999999987654 3456779999999999964 6999999999999999
Q ss_pred cCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCe
Q 001366 901 INEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNK 979 (1092)
Q Consensus 901 l~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~ 979 (1092)
+.++.++.++. |...|.|+++. + .++++|+.|.+|++||+..+. .+..++||..-|.++.|. ++.+++|+.||+
T Consensus 347 ~st~efvRtl~gHkRGIAClQYr--~-rlvVSGSSDntIRlwdi~~G~-cLRvLeGHEeLvRciRFd-~krIVSGaYDGk 421 (499)
T KOG0281|consen 347 TSTCEFVRTLNGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRFD-NKRIVSGAYDGK 421 (499)
T ss_pred ccceeeehhhhcccccceehhcc--C-eEEEecCCCceEEEEeccccH-HHHHHhchHHhhhheeec-Cceeeeccccce
Confidence 99999999998 67789999986 3 599999999999999999886 467899999999999994 788999999999
Q ss_pred EEEEEcCCCCCC-CCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCce
Q 001366 980 LKLWDLKRTSHT-GPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPI 1041 (1092)
Q Consensus 980 I~vWDl~~~~~~-~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i 1041 (1092)
|+|||+.....+ ......|+.++..|++.|..+.|. ...|++++.|.+|.|||+..+.+-
T Consensus 422 ikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD--~fqIvsssHddtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 422 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWDFLNGPPS 482 (499)
T ss_pred EEEEecccccCCcccccchHHHhhhhccceeEEEeec--ceEEEeccCCCeEEEEEcCCCCcc
Confidence 999999865433 233446788888899999888885 457999999999999998766543
No 99
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.96 E-value=2.5e-30 Score=272.18 Aligned_cols=253 Identities=17% Similarity=0.170 Sum_probs=181.3
Q ss_pred ccceeeeCCCCCcccccccccccc-ccccccCchhhHhhhhhhhhhccCCCCCCCccccceec-CCCCCCCccCCCCCcc
Q 001366 222 GKGIVCRGPPLNAFKERRGMIDTK-AFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVS-NGSLDLGARTGVPASC 299 (1092)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 299 (1092)
-.|.|||+.+.+.-.-+....|.| ++...++..-...+.++.+|++..+|||++++...... +....
T Consensus 36 TYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~----------- 104 (438)
T KOG0666|consen 36 TYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW----------- 104 (438)
T ss_pred ccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE-----------
Confidence 369999997766333323345554 44333445556778999999999999999986555443 11111
Q ss_pred ccCCCcccccCCCCCHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC----CcEEEe
Q 001366 300 WIGGLRQGSSDHGVNLREWLNAR----GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS----NQVKYI 371 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~----~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~----~~vkl~ 371 (1092)
.+.+| ..-+|.+.|+-. .+.++...+..|+.||++||.|||++-|+||||||+|||+..+ |.|||+
T Consensus 105 -----l~fdY-AEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 105 -----LLFDY-AEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred -----EEehh-hhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEee
Confidence 13344 456899999543 3457777899999999999999999999999999999999977 999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||++|.+..+..
T Consensus 179 DlGlaR~~~~plk------------------------------------------------------------------- 191 (438)
T KOG0666|consen 179 DLGLARLFNNPLK------------------------------------------------------------------- 191 (438)
T ss_pred cccHHHHhhcccc-------------------------------------------------------------------
Confidence 9999998764321
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC--
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR-- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~-- 528 (1092)
+.-+....+-|.||+|||+|.| ..||.+.|+||+|||+.|||+-
T Consensus 192 ---------------------------------pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~P 238 (438)
T KOG0666|consen 192 ---------------------------------PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEP 238 (438)
T ss_pred ---------------------------------ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCc
Confidence 1112236788999999999999 6699999999999999999973
Q ss_pred -CCcHHH---------HHHH---HHhccc---cCCC---------------------CC--------CCCCChhHHHHHH
Q 001366 529 -FDSERA---------LAAA---MSDLRD---RILP---------------------PS--------FLSENPKEAGFCL 563 (1092)
Q Consensus 529 -f~~~~~---------~~~~---~~~~~~---~~~p---------------------~~--------~~~~~~~~~~li~ 563 (1092)
|.+.+. ..+. +..+-. ...| +. ....+|...+|+.
T Consensus 239 lF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~ 318 (438)
T KOG0666|consen 239 LFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQ 318 (438)
T ss_pred cccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHH
Confidence 433321 1111 111110 0000 10 1123455789999
Q ss_pred hccccCCCCCCCHHHHhhhhhhhhhhcc
Q 001366 564 WQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1092)
Q Consensus 564 ~lL~~dP~~Rpsa~eiL~~~~~~~~~~~ 591 (1092)
+||.+||.+|+|+.+.|+|+||.+.+.+
T Consensus 319 klL~yDP~kRIta~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 319 KLLTYDPIKRITAEQALEHPYFTEDPLP 346 (438)
T ss_pred HHhccCchhhccHHHHhcccccccCCCC
Confidence 9999999999999999999999987444
No 100
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.96 E-value=2.2e-30 Score=303.07 Aligned_cols=292 Identities=14% Similarity=0.112 Sum_probs=183.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++...+ .+..++.|+...... .........+..++....||+++.++.....+...+
T Consensus 11 ~G~~g~Vy~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~--------- 77 (381)
T cd05626 11 IGAFGEVCLACKVD----THALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLY--------- 77 (381)
T ss_pred ecCCEEEEEEEECC----CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEE---------
Confidence 45789999997632 355666665533221 112233445666788889999998776655433333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++||||.||+|.+++...+ .+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++
T Consensus 78 -------lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~ 149 (381)
T cd05626 78 -------FVMDYIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCT 149 (381)
T ss_pred -------EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCc
Confidence 3899999999999997765 46676899999999999999999999999999999999999999999999987
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+.......... .... .+ .... ..+..+. +.........
T Consensus 150 ~~~~~~~~~~~~-----------~~~~--------~~---~~~~----~~~~~~~---------------~~~~~~~~~~ 188 (381)
T cd05626 150 GFRWTHNSKYYQ-----------KGSH--------IR---QDSM----EPSDLWD---------------DVSNCRCGDR 188 (381)
T ss_pred cccccccccccc-----------cccc--------cc---cccc----Ccccccc---------------cccccccccc
Confidence 643211100000 0000 00 0000 0000000 0000000000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
..... ...............+||+.|+|||.+.+..++.++|||||||+||||++| |.....
T Consensus 189 ~~~~~---------------~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~ 253 (381)
T cd05626 189 LKTLE---------------QRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTP 253 (381)
T ss_pred cchhh---------------ccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCH
Confidence 00000 000000001111256899999999999998899999999999999999986 433333
Q ss_pred HHHHHHhcc--ccCCCCCCCCCChhHHHHHHhccc--cCCCCCCCHHHHhhhhhhhhh
Q 001366 535 LAAAMSDLR--DRILPPSFLSENPKEAGFCLWQLH--PEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 535 ~~~~~~~~~--~~~~p~~~~~~~~~~~~li~~lL~--~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
.......+. .....|.....++++.+|+.+||. ++|..||++.+|+.||||.+.
T Consensus 254 ~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 254 TETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred HHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence 322222222 222233444568999999999664 455569999999999999753
No 101
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.96 E-value=5.7e-28 Score=247.99 Aligned_cols=286 Identities=14% Similarity=0.236 Sum_probs=250.3
Q ss_pred eeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCc
Q 001366 773 GEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV 852 (1092)
Q Consensus 773 ~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dgt 852 (1092)
..+.+|...|.+|+|+.+|..||+|+.|+++++|++... .........+|.+.|-.++|+|.....|++++.|.+
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~-----r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ 88 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERD-----RFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKT 88 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecch-----hhhhhhcccCCCcchhhheeCCCCCcceEEecCCce
Confidence 356789999999999999999999999999999998753 122334456789999999999988999999999999
Q ss_pred EEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEE
Q 001366 853 VKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFG 932 (1092)
Q Consensus 853 V~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latg 932 (1092)
|++||+.+++++.........+ -+.|+| ++++++.++.|..|.+.|.++.+.+...+....++-+.|+-++ .+|+..
T Consensus 89 ir~wd~r~~k~~~~i~~~~eni-~i~wsp-~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~n-d~Fflt 165 (313)
T KOG1407|consen 89 IRIWDIRSGKCTARIETKGENI-NITWSP-DGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSN-DLFFLT 165 (313)
T ss_pred EEEEEeccCcEEEEeeccCcce-EEEEcC-CCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCC-CEEEEe
Confidence 9999999999998887555555 689999 8999999999999999999999988888888888999999555 466666
Q ss_pred ECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEE
Q 001366 933 SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNF 1011 (1092)
Q Consensus 933 s~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~ 1011 (1092)
...|+|.|......+ ++..+.+|.....||.|+ ++.+|++|+.|-.+.+||+. .-.|.+.+..+.-+|+.
T Consensus 166 ~GlG~v~ILsypsLk-pv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~--------ELiC~R~isRldwpVRT 236 (313)
T KOG1407|consen 166 NGLGCVEILSYPSLK-PVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVD--------ELICERCISRLDWPVRT 236 (313)
T ss_pred cCCceEEEEeccccc-cccccccCCcceEEEEECCCCceEeeccccceeeccChh--------HhhhheeeccccCceEE
Confidence 678999999888665 678899999999999999 78899999999999999998 45788999999999999
Q ss_pred EEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecC--------
Q 001366 1012 VGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSS-------- 1083 (1092)
Q Consensus 1012 v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~D-------- 1083 (1092)
++||.||++||+||+|..|-|=++.+|..+..++. .++-..|+|+|+..+||-+++|
T Consensus 237 lSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~---------------~~~t~tVAWHPk~~LLAyA~ddk~~d~~re 301 (313)
T KOG1407|consen 237 LSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPC---------------EGPTFTVAWHPKRPLLAYACDDKDGDSNRE 301 (313)
T ss_pred EEeccCcceeeccCccceEEeEecccCCeEEEeec---------------cCCceeEEecCCCceeeEEecCCCCccccc
Confidence 99999999999999999999999999999888763 5678999999999999988765
Q ss_pred -CeEEEEE
Q 001366 1084 -GCIKVLQ 1090 (1092)
Q Consensus 1084 -G~V~vW~ 1090 (1092)
|.|++|=
T Consensus 302 ag~vKiFG 309 (313)
T KOG1407|consen 302 AGTVKIFG 309 (313)
T ss_pred cceeEEec
Confidence 5777763
No 102
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-30 Score=300.33 Aligned_cols=238 Identities=17% Similarity=0.164 Sum_probs=185.7
Q ss_pred ccceeeeCCCCCccccccccccccccccccCchh-----hHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-----AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
.+|+|+.+.. +...+..|.|+.--..+..+ .....++-.+ .++||-++.++.-.+.+..++
T Consensus 380 sFGkV~lae~----k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~l--a~~HPFL~~L~~~fQT~~~l~-------- 445 (694)
T KOG0694|consen 380 SFGKVLLAEL----KGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFEL--ANRHPFLVNLFSCFQTKEHLF-------- 445 (694)
T ss_pred cCceEEEEEE----cCCCcEEEEEEeeccceeccccHHHHHHHHHHHHH--hccCCeEeecccccccCCeEE--------
Confidence 3699999887 44456666665433332222 1222222222 227888776544444333222
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
.+|||+.||+|..++... .+++..++.|+..|+.||+|||++|||+||||-+||||+..|++||+|||++
T Consensus 446 --------fvmey~~Ggdm~~~~~~~--~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlc 515 (694)
T KOG0694|consen 446 --------FVMEYVAGGDLMHHIHTD--VFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLC 515 (694)
T ss_pred --------EEEEecCCCcEEEEEecc--cccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccc
Confidence 389999999976665433 6888899999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
|+.... |
T Consensus 516 Ke~m~~-------------------------------------------------------------------g------ 522 (694)
T KOG0694|consen 516 KEGMGQ-------------------------------------------------------------------G------ 522 (694)
T ss_pred cccCCC-------------------------------------------------------------------C------
Confidence 874310 0
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
...++.||||-|||||++.+..||.++|.|||||+|||||.| |++++
T Consensus 523 ------------------------------~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd 572 (694)
T KOG0694|consen 523 ------------------------------DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD 572 (694)
T ss_pred ------------------------------CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 011278999999999999999999999999999999999974 88888
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEF 588 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-----a~eiL~~~~~~~~ 588 (1092)
+....-+++....+.|.++ +.+...++.+||.++|++|.. +.+|.+||||...
T Consensus 573 Eee~FdsI~~d~~~yP~~l--s~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i 630 (694)
T KOG0694|consen 573 EEEVFDSIVNDEVRYPRFL--SKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSI 630 (694)
T ss_pred HHHHHHHHhcCCCCCCCcc--cHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccC
Confidence 8888888888888888887 788889999999999999975 4899999999875
No 103
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.96 E-value=4e-30 Score=291.93 Aligned_cols=252 Identities=15% Similarity=0.193 Sum_probs=180.3
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||+|... ..+..++.|...............++..++...+|||++.+++....+...+
T Consensus 8 y~~~~~lg~G~~g~Vy~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--- 80 (309)
T cd07872 8 YIKLEKLGEGTYATVFKGRSK----LTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLT--- 80 (309)
T ss_pred eEEEEEecccCCEEEEEEEec----CCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEE---
Confidence 4444444 478999999762 2244455554432222222233456677788889999998777655433333
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
++|||+++ +|.+++...+..++..+++.++.||+.||+|||++||+||||||+||+++.++.+|++
T Consensus 81 -------------lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~ 146 (309)
T cd07872 81 -------------LVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLA 146 (309)
T ss_pred -------------EEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEC
Confidence 37999986 8999998776678888999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++......
T Consensus 147 Dfg~~~~~~~~~-------------------------------------------------------------------- 158 (309)
T cd07872 147 DFGLARAKSVPT-------------------------------------------------------------------- 158 (309)
T ss_pred ccccceecCCCc--------------------------------------------------------------------
Confidence 999886532100
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC--
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR-- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~-- 528 (1092)
.......+|++|+|||.+.+ ..++.++|||||||++|||+++
T Consensus 159 -----------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~ 203 (309)
T cd07872 159 -----------------------------------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRP 203 (309)
T ss_pred -----------------------------------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 00013457889999999876 5689999999999999999986
Q ss_pred -CCcHHHHH---HHHHhccc-----------------cCCC--------CCCCCCChhHHHHHHhccccCCCCCCCHHHH
Q 001366 529 -FDSERALA---AAMSDLRD-----------------RILP--------PSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (1092)
Q Consensus 529 -f~~~~~~~---~~~~~~~~-----------------~~~p--------~~~~~~~~~~~~li~~lL~~dP~~Rpsa~ei 579 (1092)
|....... ..+..+.. ...| ......++++.+|+.+||++||.+|||+.|+
T Consensus 204 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~ 283 (309)
T cd07872 204 LFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEA 283 (309)
T ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHH
Confidence 43322211 11111100 0001 1122456788999999999999999999999
Q ss_pred hhhhhhhhhh
Q 001366 580 LQSEVTNEFQ 589 (1092)
Q Consensus 580 L~~~~~~~~~ 589 (1092)
|+||||....
T Consensus 284 l~h~~~~~~~ 293 (309)
T cd07872 284 MKHAYFRSLG 293 (309)
T ss_pred hcChhhhhcc
Confidence 9999998753
No 104
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.96 E-value=8.2e-30 Score=286.22 Aligned_cols=253 Identities=16% Similarity=0.131 Sum_probs=170.0
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhh---hhhccCCCCCCCccccceecCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGA---MMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
|.+.+.+ ++.|+||++.... ..+..++.|+...... ........++. +.+....|||++.+++........
T Consensus 3 Y~~~~~lg~G~~g~Vy~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 3 YECVAEIGEGAYGKVFKARDLK---NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred cceeeEeccCCCeEEEEEEEcC---CCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 4444433 4789999996521 0023344443321111 11111122222 334445799999876654321111
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
. .... ..+|||+. ++|.+++... ...++..+++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 80 ~----~~~~-------~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~ 147 (290)
T cd07862 80 R----ETKL-------TLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG 147 (290)
T ss_pred C----CCcE-------EEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCC
Confidence 0 0111 13788886 5999999653 33477889999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+|++|||+++.....
T Consensus 148 ~~kl~Dfg~~~~~~~~---------------------------------------------------------------- 163 (290)
T cd07862 148 QIKLADFGLARIYSFQ---------------------------------------------------------------- 163 (290)
T ss_pred CEEEccccceEeccCC----------------------------------------------------------------
Confidence 9999999988653310
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
.......||++|+|||.+.+..++.++|||||||+||||+
T Consensus 164 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 203 (290)
T cd07862 164 ----------------------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 203 (290)
T ss_pred ----------------------------------------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHH
Confidence 0011456899999999999989999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccccCC--C-----------------------CCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001366 527 GR---FDSERALAAAMSDLRDRIL--P-----------------------PSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~~~~--p-----------------------~~~~~~~~~~~~li~~lL~~dP~~Rpsa~e 578 (1092)
++ |.+..........+..... + ...+..++.+.+|+.+||+++|++|||+.|
T Consensus 204 ~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~ 283 (290)
T cd07862 204 RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS 283 (290)
T ss_pred cCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHH
Confidence 86 4443332222222111000 0 011245677889999999999999999999
Q ss_pred Hhhhhhh
Q 001366 579 ILQSEVT 585 (1092)
Q Consensus 579 iL~~~~~ 585 (1092)
+|+||||
T Consensus 284 ~l~hp~f 290 (290)
T cd07862 284 ALSHPYF 290 (290)
T ss_pred HhcCCCC
Confidence 9999997
No 105
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.96 E-value=3.9e-30 Score=294.12 Aligned_cols=242 Identities=16% Similarity=0.112 Sum_probs=175.6
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhh-hhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAG-AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
.+|.|.||++... ..+..++.|++...... ........+ ..++...+|||++.++.....+...+
T Consensus 5 ~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~-------- 72 (323)
T cd05575 5 KGSFGKVLLAKHK----ADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLY-------- 72 (323)
T ss_pred eCCCeEEEEEEEC----CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEE--------
Confidence 3678999999863 23555666665322111 111112222 22456779999998765544333222
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
++|||++|++|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 73 --------lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~ 143 (323)
T cd05575 73 --------FVLDYVNGGELFFHLQRER-SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLC 143 (323)
T ss_pred --------EEEcCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCC
Confidence 3899999999999997654 4677789999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.....
T Consensus 144 ~~~~~~-------------------------------------------------------------------------- 149 (323)
T cd05575 144 KEGIEH-------------------------------------------------------------------------- 149 (323)
T ss_pred cccccC--------------------------------------------------------------------------
Confidence 642200
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
.......+||+.|+|||++.+..++.++|||||||+||||+++ |....
T Consensus 150 -----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~ 200 (323)
T cd05575 150 -----------------------------SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD 200 (323)
T ss_pred -----------------------------CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC
Confidence 0001145689999999999999999999999999999999986 43333
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH----HHHhhhhhhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT----REILQSEVTNE 587 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa----~eiL~~~~~~~ 587 (1092)
........+.... ......++.+.+|+.+||+.||.+||++ .++++||||..
T Consensus 201 ~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 201 TAEMYDNILNKPL--RLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred HHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCC
Confidence 2222222222211 1222347889999999999999999998 69999999965
No 106
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.96 E-value=3.4e-30 Score=296.64 Aligned_cols=250 Identities=15% Similarity=0.111 Sum_probs=182.4
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
+.+|.+.+.++ +.|.||++...+. . +..++.|++..... ........++..++...+|||++.++.....+..
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~--~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~ 105 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNE--D-FPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESY 105 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECC--C-CeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCE
Confidence 33455544444 6799999964220 0 12344444321111 1122234456677888899999987766544333
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
.+ ++|||+.||+|.++|...+ .++...+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 106 ~~----------------lv~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~ 168 (340)
T PTZ00426 106 LY----------------LVLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG 168 (340)
T ss_pred EE----------------EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC
Confidence 33 3899999999999997765 467778999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+|++|||+++.....
T Consensus 169 ~ikL~DFG~a~~~~~~---------------------------------------------------------------- 184 (340)
T PTZ00426 169 FIKMTDFGFAKVVDTR---------------------------------------------------------------- 184 (340)
T ss_pred CEEEecCCCCeecCCC----------------------------------------------------------------
Confidence 9999999988653200
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
....+||+.|+|||++.+..++.++|||||||+||||+
T Consensus 185 ------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 222 (340)
T PTZ00426 185 ------------------------------------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEIL 222 (340)
T ss_pred ------------------------------------------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHh
Confidence 01346899999999999988999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
+| |...................|. ..++.+.+|+.+||..+|.+|+ ++.++++||||...
T Consensus 223 ~G~~Pf~~~~~~~~~~~i~~~~~~~p~--~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 223 VGCPPFYANEPLLIYQKILEGIIYFPK--FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred cCCCCCCCCCHHHHHHHHhcCCCCCCC--CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 86 4443333333333333222222 2467889999999999999995 89999999999764
No 107
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.96 E-value=4.4e-30 Score=294.90 Aligned_cols=242 Identities=16% Similarity=0.169 Sum_probs=178.8
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.++.|.||++...+ .++.++.|++...... ........+..++...+|||++.++.....+...+
T Consensus 11 ~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~--------- 77 (333)
T cd05600 11 QGGYGQVFLAKKKD----TGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLY--------- 77 (333)
T ss_pred ecCCeEEEEEEECC----CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEE---------
Confidence 34789999998632 2455666655322111 11222344556677778999998776554333333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++|||++|++|.+++...+ .+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus 78 -------lv~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~ 149 (333)
T cd05600 78 -------LAMEYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSK 149 (333)
T ss_pred -------EEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCc
Confidence 3899999999999997665 46677899999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
....
T Consensus 150 ~~~~---------------------------------------------------------------------------- 153 (333)
T cd05600 150 GIVT---------------------------------------------------------------------------- 153 (333)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 5330
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
.....+||+.|+|||.+.+..++.++|||||||+||||+++ |.....
T Consensus 154 ------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~ 203 (333)
T cd05600 154 ------------------------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP 203 (333)
T ss_pred ------------------------------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH
Confidence 00145789999999999999999999999999999999986 433222
Q ss_pred HHHH--HHhccccCCCCCC----CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 535 LAAA--MSDLRDRILPPSF----LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 535 ~~~~--~~~~~~~~~p~~~----~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
.... +.........|.. ...++++.+|+.+||..+|.+||++.++++||||...
T Consensus 204 ~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 204 NETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred HHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 2211 1111111111211 2457889999999999999999999999999999864
No 108
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.96 E-value=6.8e-30 Score=297.00 Aligned_cols=278 Identities=16% Similarity=0.117 Sum_probs=179.7
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.++.|.||++...+ .+..++.|+....... .......++..++....||+++..+.....+...+
T Consensus 11 ~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~--------- 77 (363)
T cd05628 11 RGAFGEVRLVQKKD----TGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLY--------- 77 (363)
T ss_pred eCCCEEEEEEEECC----CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEE---------
Confidence 35789999987632 3455666665322211 11122334556677889999998766544333333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
.+||||+||+|.++|...+ .++..+++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+++
T Consensus 78 -------lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~ 149 (363)
T cd05628 78 -------LIMEFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCT 149 (363)
T ss_pred -------EEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcc
Confidence 3899999999999997764 46777999999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+.......... ..+... ..++....
T Consensus 150 ~~~~~~~~~~~~--------------------------~~~~~~------------------------~~~~~~~~---- 175 (363)
T cd05628 150 GLKKAHRTEFYR--------------------------NLNHSL------------------------PSDFTFQN---- 175 (363)
T ss_pred cccccccccccc--------------------------cccccc------------------------cccccccc----
Confidence 654211000000 000000 00000000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
+....................+||+.|+|||++.+..++.++|||||||+||||++| |.+...
T Consensus 176 --------------~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~ 241 (363)
T cd05628 176 --------------MNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP 241 (363)
T ss_pred --------------cccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCH
Confidence 000000000000001112356899999999999999999999999999999999986 443333
Q ss_pred HHHHHHhcc--cc-CCCCCCCCCChhHHHHHHhccccCCC---CCCCHHHHhhhhhhhhh
Q 001366 535 LAAAMSDLR--DR-ILPPSFLSENPKEAGFCLWQLHPEPL---SRPTTREILQSEVTNEF 588 (1092)
Q Consensus 535 ~~~~~~~~~--~~-~~p~~~~~~~~~~~~li~~lL~~dP~---~Rpsa~eiL~~~~~~~~ 588 (1092)
......... .. .+|+ ....++++.+|+.+|+. +|. .||++.||++||||...
T Consensus 242 ~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 242 QETYKKVMNWKETLIFPP-EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred HHHHHHHHcCcCcccCCC-cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence 222222221 22 2333 33457889999999875 444 46899999999999764
No 109
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=2.3e-28 Score=283.17 Aligned_cols=285 Identities=19% Similarity=0.299 Sum_probs=244.8
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001366 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1092)
Q Consensus 775 l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~ 854 (1092)
+...++.|.+++|+|.-..++++-.+|.|++||+.- .........|.++|..|+|+|. ..+++||+.|-+|+
T Consensus 5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM-------~tli~rFdeHdGpVRgv~FH~~-qplFVSGGDDykIk 76 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRM-------GTLIDRFDEHDGPVRGVDFHPT-QPLFVSGGDDYKIK 76 (1202)
T ss_pred hhcccccccceecCCCCCEEEEeecCceeeeehhhh-------hhHHhhhhccCCccceeeecCC-CCeEEecCCccEEE
Confidence 345567889999999999999999999999999863 1222334579999999999998 88999999999999
Q ss_pred EEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEE
Q 001366 855 LWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGS 933 (1092)
Q Consensus 855 IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs 933 (1092)
+|+..+.+|+.++.||-+-|..+.|++ .--+++|+|+|.+|+||+..+++|+..+. |..-|.|.+|+|... +++++|
T Consensus 77 VWnYk~rrclftL~GHlDYVRt~~FHh-eyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptED-lIVSaS 154 (1202)
T KOG0292|consen 77 VWNYKTRRCLFTLLGHLDYVRTVFFHH-EYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTED-LIVSAS 154 (1202)
T ss_pred EEecccceehhhhccccceeEEeeccC-CCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccc-eEEEec
Confidence 999999999999999999999999998 66689999999999999999999999998 566799999999775 899999
Q ss_pred CCCeEEEEEcCCCCc----------------------------ceEEecCCCCCeEEEEEcC-CCEEEEEECCCeEEEEE
Q 001366 934 ADYRTYCYDLRNARA----------------------------PWCVLAGHEKAVSYVKFLD-SGTLVTASTDNKLKLWD 984 (1092)
Q Consensus 934 ~Dg~I~vwDlr~~~~----------------------------~~~~l~~H~~~V~~v~fs~-~~~L~Sgs~Dg~I~vWD 984 (1092)
-|.+|+|||+...++ ...++.||...|..++|++ --.|+||+.|..|++|.
T Consensus 155 LDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWr 234 (1202)
T KOG0292|consen 155 LDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR 234 (1202)
T ss_pred ccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEE
Confidence 999999999863211 1245789999999999994 45789999999999999
Q ss_pred cCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCC
Q 001366 985 LKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLF 1064 (1092)
Q Consensus 985 l~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~ 1064 (1092)
+... ....+-+..||.+.|.++-|+|...+|++.|+|++|+|||....+.+.+++- . +..
T Consensus 235 mnet------KaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrr-------------e-ndR 294 (1202)
T KOG0292|consen 235 MNET------KAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRR-------------E-NDR 294 (1202)
T ss_pred eccc------cceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeec-------------c-CCe
Confidence 9743 2345667889999999999999999999999999999999999999988862 2 345
Q ss_pred EEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1065 VSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1065 V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
-|.++-+|..+++|+|...|.+ ||.
T Consensus 295 FW~laahP~lNLfAAgHDsGm~-VFk 319 (1202)
T KOG0292|consen 295 FWILAAHPELNLFAAGHDSGMI-VFK 319 (1202)
T ss_pred EEEEEecCCcceeeeecCCceE-EEE
Confidence 7999999999998888766654 443
No 110
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96 E-value=9.2e-30 Score=292.06 Aligned_cols=243 Identities=17% Similarity=0.159 Sum_probs=177.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.++.|+||++.... .+..++.|+..............++..++...+|||++.++.....+...+
T Consensus 15 ~G~~g~V~~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~----------- 79 (331)
T cd06649 15 AGNGGVVTKVQHKP----SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS----------- 79 (331)
T ss_pred CCCCEEEEEEEECC----CCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE-----------
Confidence 34689999988632 344455555432222222344556677788899999998877655433333
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhc-CccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~-gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+|||++|++|.++++... .++...+..++.||+.||.|||++ +|+||||||+|||++.++.+|++|||+++.
T Consensus 80 -----lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 153 (331)
T cd06649 80 -----ICMEHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 153 (331)
T ss_pred -----EEeecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccc
Confidence 3799999999999997654 467778999999999999999986 699999999999999999999999998765
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+.+..
T Consensus 154 ~~~~~--------------------------------------------------------------------------- 158 (331)
T cd06649 154 LIDSM--------------------------------------------------------------------------- 158 (331)
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 33100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH-
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA- 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~- 534 (1092)
.....||+.|+|||.+.+..++.++|||||||+||||+++ |.....
T Consensus 159 ------------------------------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~ 208 (331)
T cd06649 159 ------------------------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK 208 (331)
T ss_pred ------------------------------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 0134688999999999998999999999999999999986 332111
Q ss_pred -HHHHHH-------------------------------------------hccccCCCC-CCCCCChhHHHHHHhccccC
Q 001366 535 -LAAAMS-------------------------------------------DLRDRILPP-SFLSENPKEAGFCLWQLHPE 569 (1092)
Q Consensus 535 -~~~~~~-------------------------------------------~~~~~~~p~-~~~~~~~~~~~li~~lL~~d 569 (1092)
...... .+.....|. .....++++.+|+.+||.+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~ 288 (331)
T cd06649 209 ELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKN 288 (331)
T ss_pred HHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCC
Confidence 111110 000000111 01134678999999999999
Q ss_pred CCCCCCHHHHhhhhhhhhh
Q 001366 570 PLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 570 P~~Rpsa~eiL~~~~~~~~ 588 (1092)
|++|||+.+||+||||...
T Consensus 289 P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 289 PAERADLKMLMNHTFIKRS 307 (331)
T ss_pred cccCCCHHHHhcChHHhhc
Confidence 9999999999999999764
No 111
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.96 E-value=4.3e-30 Score=292.84 Aligned_cols=242 Identities=17% Similarity=0.155 Sum_probs=175.0
Q ss_pred ccccceeeeCCCCCcccccccccccccccccc--CchhhHhhhhhhhhhc-cCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTT--MPSDAALKAAGAMMVA-SNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
.+|.|.||++...+ .+..++.|+..... ..........+...+. ...||+++.++.....+...+
T Consensus 5 ~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~-------- 72 (316)
T cd05619 5 KGSFGKVFLAELKG----TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLF-------- 72 (316)
T ss_pred eCCCEEEEEEEECC----CCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEE--------
Confidence 46789999998632 24455555442211 1112222333333343 358999998776654433333
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
++|||++|++|.+++.... .++..++..++.||+.||+|||++||+||||||+|||++.++.+|++|||++
T Consensus 73 --------lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 143 (316)
T cd05619 73 --------FVMEYLNGGDLMFHIQSCH-KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMC 143 (316)
T ss_pred --------EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcc
Confidence 3899999999999997654 4677789999999999999999999999999999999999999999999988
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.....
T Consensus 144 ~~~~~~-------------------------------------------------------------------------- 149 (316)
T cd05619 144 KENMLG-------------------------------------------------------------------------- 149 (316)
T ss_pred eECCCC--------------------------------------------------------------------------
Confidence 642200
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
........||+.|+|||++.+..++.++|||||||+||||++| |....
T Consensus 150 -----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~ 200 (316)
T cd05619 150 -----------------------------DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD 200 (316)
T ss_pred -----------------------------CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC
Confidence 0001145689999999999998999999999999999999986 43332
Q ss_pred HHHHHHHhccc-cCCCCCCCCCChhHHHHHHhccccCCCCCCCHH-HHhhhhhhhhh
Q 001366 534 ALAAAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR-EILQSEVTNEF 588 (1092)
Q Consensus 534 ~~~~~~~~~~~-~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~-eiL~~~~~~~~ 588 (1092)
.. ..+..+.. ....| ...+.++.+|+.+||+++|.+||++. ++++||||...
T Consensus 201 ~~-~~~~~i~~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 201 EE-ELFQSIRMDNPCYP--RWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred HH-HHHHHHHhCCCCCC--ccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence 22 22222221 11112 23567889999999999999999996 99999999774
No 112
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.96 E-value=1.1e-27 Score=255.99 Aligned_cols=322 Identities=15% Similarity=0.201 Sum_probs=262.4
Q ss_pred hhccchhhhhhccccccCCCCcE--EeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Q 001366 726 LRDRENLFLAQQDQEIQNPTDRL--GAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKI 803 (1092)
Q Consensus 726 l~~~~~~~~~~~~~~~~~~~~~l--~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I 803 (1092)
+..|...+-++. -+|+..+ ++.-|..--+|+..+.+... .+.+|.+.|+++.|+.+|.+||||+.+|.|
T Consensus 60 F~~H~~svFavs----l~P~~~l~aTGGgDD~AflW~~~~ge~~~-----eltgHKDSVt~~~FshdgtlLATGdmsG~v 130 (399)
T KOG0296|consen 60 FDKHTDSVFAVS----LHPNNNLVATGGGDDLAFLWDISTGEFAG-----ELTGHKDSVTCCSFSHDGTLLATGDMSGKV 130 (399)
T ss_pred hhhcCCceEEEE----eCCCCceEEecCCCceEEEEEccCCccee-----EecCCCCceEEEEEccCceEEEecCCCccE
Confidence 344544443332 3455555 44567777899988877443 456999999999999999999999999999
Q ss_pred EEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCC
Q 001366 804 KIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVH 883 (1092)
Q Consensus 804 ~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~ 883 (1092)
+||+..+.. ........-..|.=++|+|. ...|+.|+.||.|.+|.+.++...+.+.+|..++++=.|.| +
T Consensus 131 ~v~~~stg~-------~~~~~~~e~~dieWl~WHp~-a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~p-d 201 (399)
T KOG0296|consen 131 LVFKVSTGG-------EQWKLDQEVEDIEWLKWHPR-AHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIP-D 201 (399)
T ss_pred EEEEcccCc-------eEEEeecccCceEEEEeccc-ccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccC-C
Confidence 999987622 11122234577888999996 89999999999999999999888899999999999999999 8
Q ss_pred CCEEEEEeCCCcEEEEecCCCceeeeEec--CCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEec-------
Q 001366 884 PTKLASGSDDCSVKLWNINEKNSLATIKN--IANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLA------- 954 (1092)
Q Consensus 884 ~~~laSgs~Dg~I~iWDl~~~~~l~~l~~--~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~------- 954 (1092)
|+.++++..||+|++||..++.++..+.. +....|+.++..+. .++.|+.++.+++....+++.. ....
T Consensus 202 GKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~-~~~~g~~e~~~~~~~~~sgKVv-~~~n~~~~~l~ 279 (399)
T KOG0296|consen 202 GKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGS-TLTKGNSEGVACGVNNGSGKVV-NCNNGTVPELK 279 (399)
T ss_pred CceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccc-eeEeccCCccEEEEccccceEE-EecCCCCcccc
Confidence 99999999999999999999999998873 44577888888885 8888999999998887776532 2222
Q ss_pred -CCCCCeEEEEEcC----CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCc
Q 001366 955 -GHEKAVSYVKFLD----SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNE 1029 (1092)
Q Consensus 955 -~H~~~V~~v~fs~----~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~ 1029 (1092)
.+...+.+|.|.+ =...++|+-||+|.|||+.. ..++....|...|..+.|-+ ..+|++++.||.
T Consensus 280 ~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~---------~~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~ 349 (399)
T KOG0296|consen 280 PSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAA---------STLRHICEHEDGVTKLKWLN-TDYLLTACANGK 349 (399)
T ss_pred ccchhhhhhhhhcccccccchhhcccccceEEEEeccc---------chhheeccCCCceEEEEEcC-cchheeeccCce
Confidence 4555666776652 23578999999999999983 23455667999999999999 779999999999
Q ss_pred EEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1030 VYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1030 I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
|+.||..+|+.+..+ .+|...|..++.+|+.++++|+|.|+..+||++
T Consensus 350 v~~wDaRtG~l~~~y--------------~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v 397 (399)
T KOG0296|consen 350 VRQWDARTGQLKFTY--------------TGHQMGILDFALSPQKRLVVTVSDDNTALVFEV 397 (399)
T ss_pred EEeeeccccceEEEE--------------ecCchheeEEEEcCCCcEEEEecCCCeEEEEec
Confidence 999999999988765 488999999999999999999999999999985
No 113
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.96 E-value=8.6e-30 Score=285.10 Aligned_cols=245 Identities=16% Similarity=0.144 Sum_probs=176.7
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCch--hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS--DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|+||++... ..+..+++|......... .......+..++...+||+++.+......+...+
T Consensus 3 ~G~~g~Vy~~~~~----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~--------- 69 (280)
T cd05608 3 KGGFGEVSACQMR----ATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLC--------- 69 (280)
T ss_pred CCCceeEEEEEEc----cCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEE---------
Confidence 4688999998762 224455555443221111 1222345666788889999997655544333222
Q ss_pred ccccCCCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg 374 (1092)
.+|||++|++|.+++.. ....+++..++.++.||+.||+|||++||+||||||+||+++.++.+|++|||
T Consensus 70 -------lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg 142 (280)
T cd05608 70 -------LVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLG 142 (280)
T ss_pred -------EEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCc
Confidence 38999999999998843 33457888999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++.+....
T Consensus 143 ~~~~~~~~~----------------------------------------------------------------------- 151 (280)
T cd05608 143 LAVELKDGQ----------------------------------------------------------------------- 151 (280)
T ss_pred cceecCCCC-----------------------------------------------------------------------
Confidence 886543100
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCc
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDS 531 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~ 531 (1092)
.......||+.|+|||.+.+..++.++|||||||+||||+++ |..
T Consensus 152 --------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 199 (280)
T cd05608 152 --------------------------------SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRA 199 (280)
T ss_pred --------------------------------ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 000134688999999999999999999999999999999986 432
Q ss_pred HHH---HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 532 ERA---LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 532 ~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
... .......+.... .......++.+.+|+.+||+.||++|| +++++++||||+..
T Consensus 200 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 200 RGEKVENKELKQRILNDS-VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred CCcchhHHHHHHhhcccC-CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 211 111111111111 111234578899999999999999999 88999999999874
No 114
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.96 E-value=8.3e-30 Score=285.72 Aligned_cols=242 Identities=15% Similarity=0.163 Sum_probs=173.0
Q ss_pred cccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
+|.|.||++...+ .+..++.|++.... .........++..++...+|||++.+.+....+...+
T Consensus 12 g~~~~v~~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~----------- 76 (287)
T cd07848 12 GAYGVVLKCRHKE----TKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLY----------- 76 (287)
T ss_pred cCCEEEEEEEECC----CCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEE-----------
Confidence 5789999997632 24455555543221 1222233445667788889999998765543332222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
++|||++|+.|..+... ...++...++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++..
T Consensus 77 -----lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~ 150 (287)
T cd07848 77 -----LVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNL 150 (287)
T ss_pred -----EEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccc
Confidence 38999999877665543 345777789999999999999999999999999999999999999999999988764
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
....
T Consensus 151 ~~~~---------------------------------------------------------------------------- 154 (287)
T cd07848 151 SEGS---------------------------------------------------------------------------- 154 (287)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 3100
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALA 536 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~ 536 (1092)
........||++|+|||++.+..++.++|||||||+||||++| |+......
T Consensus 155 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~ 208 (287)
T cd07848 155 --------------------------NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID 208 (287)
T ss_pred --------------------------cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH
Confidence 0001134688999999999998899999999999999999986 44332222
Q ss_pred HHHHhcc--c------------------cCCCCC----------CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 537 AAMSDLR--D------------------RILPPS----------FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 537 ~~~~~~~--~------------------~~~p~~----------~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
....... . ...|.. ....++.+.+||.+||++||.+|||++++|+||||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 209 QLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred HHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 1111100 0 001100 11245678999999999999999999999999997
No 115
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.96 E-value=5.5e-30 Score=299.87 Aligned_cols=290 Identities=15% Similarity=0.159 Sum_probs=184.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.++.|.||++.... .+..++.|+...... ........++..++....||+++.++.....+...+
T Consensus 11 ~G~~g~Vy~a~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~--------- 77 (382)
T cd05625 11 IGAFGEVCLARKVD----TKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLY--------- 77 (382)
T ss_pred eCCCEEEEEEEECC----CCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEE---------
Confidence 35789999997632 244455554422111 111223344566778889999998877755443333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++||||+||+|.++|...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus 78 -------lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~ 149 (382)
T cd05625 78 -------FVMDYIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT 149 (382)
T ss_pred -------EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCc
Confidence 3899999999999997664 46677899999999999999999999999999999999999999999999987
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+............+.... .... +... .+.+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~------~~~~----------~~~~----------------------------~~~~~~~~- 184 (382)
T cd05625 150 GFRWTHDSKYYQSGDHVRQ------DSMD----------FSNE----------------------------WGDPANCR- 184 (382)
T ss_pred ccccccccccccccccccc------cccc----------cccc----------------------------cccccccc-
Confidence 5432111100000000000 0000 0000 00000000
Q ss_pred cccccccCCCCCccCCCCCccccc-ccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNT-AQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
..... .+..... ...........+||++|+|||++.+..++.++|||||||+||||++| |....
T Consensus 185 ~~~~~------------~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~ 252 (382)
T cd05625 185 CGDRL------------KPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQT 252 (382)
T ss_pred ccccc------------cchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCC
Confidence 00000 0000000 00001111256899999999999999999999999999999999986 54444
Q ss_pred HHHHHHHhcc--ccCCCCCCCCCChhHHHHHHhccccCCCCCCC---HHHHhhhhhhhhh
Q 001366 534 ALAAAMSDLR--DRILPPSFLSENPKEAGFCLWQLHPEPLSRPT---TREILQSEVTNEF 588 (1092)
Q Consensus 534 ~~~~~~~~~~--~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps---a~eiL~~~~~~~~ 588 (1092)
.....+..+. .....|.....++++.+|+.+|+ .+|.+|++ +.++++||||...
T Consensus 253 ~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 253 PLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred HHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 4333333332 22222334456899999999986 59999987 9999999999663
No 116
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.96 E-value=8.9e-30 Score=291.27 Aligned_cols=242 Identities=16% Similarity=0.116 Sum_probs=175.0
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC-chhhHhh----hhhhhhhccCCCCCCCccccceecCCCCCCCccCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALK----AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTG 294 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1092)
.++.|.||++... ..+..++.|+...... ....... .+...++...+|||++.++.........+
T Consensus 9 ~G~~g~Vy~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~------ 78 (324)
T cd05589 9 RGHFGKVLLAEYK----KTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVC------ 78 (324)
T ss_pred ecCCEEEEEEEEC----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEE------
Confidence 3578999998752 2345566655432111 1111111 12222345668999998776544333333
Q ss_pred CCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccc
Q 001366 295 VPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1092)
Q Consensus 295 ~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg 374 (1092)
.+|||++|++|..++... .++..+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||
T Consensus 79 ----------lv~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05589 79 ----------FVMEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFG 146 (324)
T ss_pred ----------EEEcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCccc
Confidence 389999999999998653 57888999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++.....
T Consensus 147 ~~~~~~~~------------------------------------------------------------------------ 154 (324)
T cd05589 147 LCKEGMGF------------------------------------------------------------------------ 154 (324)
T ss_pred CCccCCCC------------------------------------------------------------------------
Confidence 87642200
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCc
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDS 531 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~ 531 (1092)
.......+||+.|+|||.+.+..++.++|||||||+||||++| |..
T Consensus 155 -------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~ 203 (324)
T cd05589 155 -------------------------------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPG 203 (324)
T ss_pred -------------------------------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCC
Confidence 0001145789999999999998999999999999999999986 444
Q ss_pred HHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 532 ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 532 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
.................| ...++.+.+|+.+||++||.+|| ++.++++||||...
T Consensus 204 ~~~~~~~~~i~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 204 DDEEEVFDSIVNDEVRYP--RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred CCHHHHHHHHHhCCCCCC--CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 333332222222222222 23478899999999999999999 68999999999764
No 117
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.96 E-value=1.9e-29 Score=300.18 Aligned_cols=250 Identities=14% Similarity=0.141 Sum_probs=171.6
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|+||+|...+ .+..++.|..... .....++..++...+|||++.+.+......... ...-..
T Consensus 76 ~G~fg~Vy~~~~~~----~~~~vAiK~i~~~-----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~---~~~~~~-- 141 (440)
T PTZ00036 76 NGSFGVVYEAICID----TSEKVAIKKVLQD-----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKK---NEKNIF-- 141 (440)
T ss_pred eCCCEEEEEEEECC----CCCEEEEEEEecC-----cchHHHHHHHHHhcCCCCCcceeeeEeeccccc---CCCceE--
Confidence 34789999998632 2445566544221 112234667788889999998654322111000 000000
Q ss_pred ccCCCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC-cEEEecccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN-QVKYIGPII 375 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~-~vkl~Dfg~ 375 (1092)
...+|||+.| +|.+++.. .+..++...++.|+.||+.||+|||++||+||||||+||||+..+ .+||+|||+
T Consensus 142 ---l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGl 217 (440)
T PTZ00036 142 ---LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGS 217 (440)
T ss_pred ---EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecccc
Confidence 1137999986 78777753 345678889999999999999999999999999999999998665 699999999
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++.+...
T Consensus 218 a~~~~~~------------------------------------------------------------------------- 224 (440)
T PTZ00036 218 AKNLLAG------------------------------------------------------------------------- 224 (440)
T ss_pred chhccCC-------------------------------------------------------------------------
Confidence 8764310
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCc
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDS 531 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~ 531 (1092)
......+||++|+|||++.+ ..++.++|||||||+||||++| |.+
T Consensus 225 -------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 273 (440)
T PTZ00036 225 -------------------------------QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSG 273 (440)
T ss_pred -------------------------------CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 00013568999999999877 4689999999999999999996 443
Q ss_pred HHHHHHHHHhccc------------------cCCCC--------CCC-CCChhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001366 532 ERALAAAMSDLRD------------------RILPP--------SFL-SENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1092)
Q Consensus 532 ~~~~~~~~~~~~~------------------~~~p~--------~~~-~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~ 584 (1092)
..........+.. ..+|. .++ ..++++.+||.+||.+||.+|||+.|+|+|||
T Consensus 274 ~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~ 353 (440)
T PTZ00036 274 QSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF 353 (440)
T ss_pred CChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence 3222222111110 00111 011 24567889999999999999999999999999
Q ss_pred hhhhhcc
Q 001366 585 TNEFQEV 591 (1092)
Q Consensus 585 ~~~~~~~ 591 (1092)
|.+....
T Consensus 354 f~~~~~~ 360 (440)
T PTZ00036 354 FDDLRDP 360 (440)
T ss_pred HHhhhcc
Confidence 9876553
No 118
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.96 E-value=6.9e-30 Score=292.15 Aligned_cols=242 Identities=17% Similarity=0.170 Sum_probs=172.9
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCC-CCccccceecCCCCCCCccCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPK-PVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
.+|.|.||++...+ .+..++.|+...... ..+......+..++....|++ ++.+......+...+
T Consensus 10 ~G~~g~Vy~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~-------- 77 (324)
T cd05587 10 KGSFGKVMLAERKG----TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY-------- 77 (324)
T ss_pred eccCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEE--------
Confidence 35789999998633 244566665432111 122233344455566666654 444433332222222
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
.+|||++|++|.+++...+ .+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 78 --------lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~ 148 (324)
T cd05587 78 --------FVMEYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMC 148 (324)
T ss_pred --------EEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcc
Confidence 3899999999999997665 4677799999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.....
T Consensus 149 ~~~~~~-------------------------------------------------------------------------- 154 (324)
T cd05587 149 KENIFG-------------------------------------------------------------------------- 154 (324)
T ss_pred eecCCC--------------------------------------------------------------------------
Confidence 642200
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
.......+||+.|+|||++.+..++.++|||||||+||||++| |....
T Consensus 155 -----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~ 205 (324)
T cd05587 155 -----------------------------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED 205 (324)
T ss_pred -----------------------------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence 0001145789999999999999999999999999999999986 44433
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH-----HHHhhhhhhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQSEVTNE 587 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa-----~eiL~~~~~~~ 587 (1092)
............. +.....++++.+|+.+||+++|.+|+++ +++++||||..
T Consensus 206 ~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~ 262 (324)
T cd05587 206 EDELFQSIMEHNV--SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRR 262 (324)
T ss_pred HHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 3333322222221 1222457888999999999999999986 89999999976
No 119
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.96 E-value=1.7e-29 Score=290.57 Aligned_cols=247 Identities=15% Similarity=0.135 Sum_probs=169.8
Q ss_pred hccccceeeeCCCCCc-cccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCC
Q 001366 219 TLKGKGIVCRGPPLNA-FKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
..+|.|.||++..... -...+..++.|+..............++...+... +|||++.++.........
T Consensus 16 G~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~--------- 86 (338)
T cd05102 16 GHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGP--------- 86 (338)
T ss_pred ccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCc---------
Confidence 3447899999863100 01113445665553222222223344556666666 899999876543311110
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcC-----------------------------------------------------
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARG----------------------------------------------------- 323 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~----------------------------------------------------- 323 (1092)
...+||||+||+|.++|....
T Consensus 87 ------~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 87 ------LMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred ------eEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 113799999999999996532
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhh
Q 001366 324 --------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRL 395 (1092)
Q Consensus 324 --------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~ 395 (1092)
..++..+++.++.||+.||+|||++||+||||||+|||++.++.+|++|||+++........
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~---------- 230 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY---------- 230 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcch----------
Confidence 23556678899999999999999999999999999999999999999999998764310000
Q ss_pred hccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCC
Q 001366 396 RRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSS 475 (1092)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (1092)
T Consensus 231 -------------------------------------------------------------------------------- 230 (338)
T cd05102 231 -------------------------------------------------------------------------------- 230 (338)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCC
Q 001366 476 PLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSF 551 (1092)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~ 551 (1092)
.......++..|+|||++.+..++.++|||||||+||||++ + |............+.....+...
T Consensus 231 -----------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 299 (338)
T cd05102 231 -----------VRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAP 299 (338)
T ss_pred -----------hcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCC
Confidence 00002345677999999999999999999999999999985 4 44322222222333333333333
Q ss_pred CCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 552 LSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 552 ~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
...++.+.+|+.+||++||.+|||+.+|++
T Consensus 300 ~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 300 ENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 455788999999999999999999999987
No 120
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.96 E-value=6.7e-30 Score=292.99 Aligned_cols=243 Identities=17% Similarity=0.127 Sum_probs=173.8
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
.+|.|.||++.... .+..++.|+...... ........++..++... +|||++.++.....+...+
T Consensus 5 ~G~~g~V~~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~-------- 72 (329)
T cd05588 5 RGSYAKVLLVELKK----TRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLF-------- 72 (329)
T ss_pred eCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEE--------
Confidence 46789999987632 345556655432111 11112223344444444 7999998766544333333
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
++||||+|++|.+++...+ .++...++.|+.||+.||+|||++||+||||||+||+++.++.+||+|||++
T Consensus 73 --------lv~e~~~~g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~ 143 (329)
T cd05588 73 --------FVIEFVSGGDLMFHMQRQR-KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMC 143 (329)
T ss_pred --------EEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccc
Confidence 3899999999999997654 5777799999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.....
T Consensus 144 ~~~~~~-------------------------------------------------------------------------- 149 (329)
T cd05588 144 KEGIRP-------------------------------------------------------------------------- 149 (329)
T ss_pred cccccC--------------------------------------------------------------------------
Confidence 642200
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcHH---
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSER--- 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~~--- 533 (1092)
.......+||+.|+|||++.+..++.++|||||||++|||+++..+..
T Consensus 150 -----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~ 200 (329)
T cd05588 150 -----------------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 200 (329)
T ss_pred -----------------------------CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccc
Confidence 000114578999999999999999999999999999999998622211
Q ss_pred --------HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC------HHHHhhhhhhhh
Q 001366 534 --------ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT------TREILQSEVTNE 587 (1092)
Q Consensus 534 --------~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps------a~eiL~~~~~~~ 587 (1092)
........+.... ++.....++++.+|+.+||++||.+||+ ++++++||||..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 201 MSDNPDQNTEDYLFQVILEKQ-IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred ccccccccchHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 1111122222211 1112245788999999999999999987 789999999965
No 121
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.96 E-value=1.4e-29 Score=294.46 Aligned_cols=281 Identities=14% Similarity=0.102 Sum_probs=184.2
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.++.|.||++.... .+..++.|+...... ........++..++...+|||++.++.....+...+
T Consensus 11 ~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~--------- 77 (364)
T cd05599 11 RGAFGEVRLVQKKD----TGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLY--------- 77 (364)
T ss_pred ecCCEEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEE---------
Confidence 35789999988632 345566665532211 112222345667788889999998776655444333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++||||.|++|.++|...+ .+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+|++|||+++
T Consensus 78 -------lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 149 (364)
T cd05599 78 -------LIMEYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCT 149 (364)
T ss_pred -------EEECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccce
Confidence 3899999999999997765 47777999999999999999999999999999999999999999999999987
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC-CC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS-HN 456 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~ 456 (1092)
.+.......... ..... .. ....++..... ..
T Consensus 150 ~~~~~~~~~~~~--------------------------~~~~~--------------------~~-~~~~~~~~~~~~~~ 182 (364)
T cd05599 150 GLKKSHRTEFYR--------------------------ILSHA--------------------LP-SNFLDFISKPMSSK 182 (364)
T ss_pred eccccccccccc--------------------------ccccc--------------------cc-cccccccccccccc
Confidence 654211100000 00000 00 00000000000 00
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
... ..............+||++|+|||++.+..++.++|||||||+||||++| |....
T Consensus 183 ~~~-------------------~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~ 243 (364)
T cd05599 183 RKA-------------------ETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDN 243 (364)
T ss_pred ccc-------------------cchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCC
Confidence 000 00000000111246899999999999999999999999999999999986 43333
Q ss_pred HHHHHHHhcc--ccCCCCCCCCCChhHHHHHHhccccCCCCCCC---HHHHhhhhhhhhh
Q 001366 534 ALAAAMSDLR--DRILPPSFLSENPKEAGFCLWQLHPEPLSRPT---TREILQSEVTNEF 588 (1092)
Q Consensus 534 ~~~~~~~~~~--~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps---a~eiL~~~~~~~~ 588 (1092)
........+. .....|.....++.+.+||.+||. +|.+|++ +.++|+||||...
T Consensus 244 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 244 PQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred HHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 3222222222 111122233457889999999996 9999998 9999999999764
No 122
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.96 E-value=8.1e-30 Score=292.29 Aligned_cols=244 Identities=17% Similarity=0.122 Sum_probs=173.9
Q ss_pred hccccceeeeCCCCCccccccccccccccccccC-c-hhhHhhhhhhhhhc-cCCCCCCCccccceecCCCCCCCccCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-P-SDAALKAAGAMMVA-SNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
..+|.|.||++.... .+..++.|+...... . ........+..++. ..+|||++.++.....+...+
T Consensus 4 G~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~------- 72 (329)
T cd05618 4 GRGSYAKVLLVRLKK----TERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF------- 72 (329)
T ss_pred eeCCCeEEEEEEECC----CCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEE-------
Confidence 356889999997632 244555555432211 1 11122233333443 348999998776655443333
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
.+|||++|++|.+++...+ .++...++.|+.||+.||+|||++||+||||||+||+++.++.+||+|||+
T Consensus 73 ---------lv~E~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~ 142 (329)
T cd05618 73 ---------FVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 142 (329)
T ss_pred ---------EEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCc
Confidence 3899999999999987654 467779999999999999999999999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++......
T Consensus 143 ~~~~~~~~------------------------------------------------------------------------ 150 (329)
T cd05618 143 CKEGLRPG------------------------------------------------------------------------ 150 (329)
T ss_pred cccccCCC------------------------------------------------------------------------
Confidence 86422000
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcHH--
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSER-- 533 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~~-- 533 (1092)
......+||+.|+|||++.+..++.++|||||||++|||+++..+..
T Consensus 151 -------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~ 199 (329)
T cd05618 151 -------------------------------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 199 (329)
T ss_pred -------------------------------CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccC
Confidence 00114578999999999999999999999999999999998632221
Q ss_pred ---------HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC------HHHHhhhhhhhh
Q 001366 534 ---------ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT------TREILQSEVTNE 587 (1092)
Q Consensus 534 ---------~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps------a~eiL~~~~~~~ 587 (1092)
........+.... .......++++.+|+.+||++||.+||+ +.++++||||..
T Consensus 200 ~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~ 267 (329)
T cd05618 200 GSSDNPDQNTEDYLFQVILEKQ-IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 267 (329)
T ss_pred CCcCCcccccHHHHHHHHhcCC-CCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 1111111111111 1112245788999999999999999998 479999999965
No 123
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=9.7e-30 Score=285.76 Aligned_cols=252 Identities=17% Similarity=0.179 Sum_probs=181.9
Q ss_pred hhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhh-hhhhhhhccC-CCCCCCccccceecCCCC
Q 001366 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALK-AAGAMMVASN-ASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 212 ~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 287 (1092)
++|.+.+.++ |.-.||+...+| ++...+.+|..- -.+-+..-. .-+.++|.+. -+-+|+.+++--+.+..+
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~----~~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~l 435 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSD----KQIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYL 435 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCC----CcchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceE
Confidence 5788877776 777999999876 344444444321 112222222 2234556655 346788777777766666
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~ 367 (1092)
+ +..+|...+|..+|+.....++....+.|.+|||.+|.++|..||||.||||.|||| -.|.
T Consensus 436 Y-----------------mvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-VkG~ 497 (677)
T KOG0596|consen 436 Y-----------------MVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VKGR 497 (677)
T ss_pred E-----------------EEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-Eeee
Confidence 6 466788899999998887766655899999999999999999999999999999999 5799
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+||||||+|+.+....+.
T Consensus 498 LKLIDFGIA~aI~~DTTs-------------------------------------------------------------- 515 (677)
T KOG0596|consen 498 LKLIDFGIANAIQPDTTS-------------------------------------------------------------- 515 (677)
T ss_pred EEeeeechhcccCccccc--------------------------------------------------------------
Confidence 999999999876521100
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-----------CCCccccch
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-----------VCTTSSNIY 516 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-----------~~t~~sDIw 516 (1092)
---.+++||.-|||||.+... +++.+||||
T Consensus 516 ---------------------------------------I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvW 556 (677)
T KOG0596|consen 516 ---------------------------------------IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVW 556 (677)
T ss_pred ---------------------------------------eeeccccCcccccCHHHHhhccccccCCCcceeecCccchh
Confidence 000168999999999998652 267999999
Q ss_pred hhhHHHHHHcCCCCcH---HHHHHHHHhcccc---CCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 517 SLGVLFFELFGRFDSE---RALAAAMSDLRDR---ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 517 SLGvll~ell~~f~~~---~~~~~~~~~~~~~---~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|||||||+|+.+-++. ....+.+..+... +..|..+. +.++.++++.||..||.+||+..++|+|||+...
T Consensus 557 SLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~-~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 557 SLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPE-NDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQ 633 (677)
T ss_pred hhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCC-chHHHHHHHHHHhcCcccCCCcHHHhcCcccccc
Confidence 9999999999764433 3333444444432 22223322 2237899999999999999999999999998763
No 124
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=1.9e-27 Score=245.55 Aligned_cols=288 Identities=18% Similarity=0.236 Sum_probs=228.4
Q ss_pred hhhccchhhhhhccccccCCC-Cc--EEeEcCCeEEEEEccc---ceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEe
Q 001366 725 LLRDRENLFLAQQDQEIQNPT-DR--LGAFFDGLCKYARYSK---FEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAG 798 (1092)
Q Consensus 725 ~l~~~~~~~~~~~~~~~~~~~-~~--l~~~~D~~~k~w~~~~---~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg 798 (1092)
.+.+|.+.+..+ .++|. +. .+.+.|..+++|.... +.+...+ -.+|...|++++|+|.|++||+|+
T Consensus 9 ~~~gh~~r~W~~----awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vl----d~~hkrsVRsvAwsp~g~~La~aS 80 (312)
T KOG0645|consen 9 KLSGHKDRVWSV----AWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVL----DDGHKRSVRSVAWSPHGRYLASAS 80 (312)
T ss_pred eecCCCCcEEEE----EeccCCceEEEeecCCceEEEEecCCCCcEEEEEec----cccchheeeeeeecCCCcEEEEee
Confidence 344555433332 35666 33 3567899999999764 4333322 248999999999999999999999
Q ss_pred CCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCC---ceEEEeeccCccEE
Q 001366 799 VSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG---QTVSHYIEHEKRAW 875 (1092)
Q Consensus 799 ~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg---~~i~~l~~h~~~V~ 875 (1092)
.|.++.||.-.. .+.......-+|...|.|++|+++ +++||+||.|+.|-||.+..+ .++..++.|+..|.
T Consensus 81 FD~t~~Iw~k~~-----~efecv~~lEGHEnEVK~Vaws~s-G~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK 154 (312)
T KOG0645|consen 81 FDATVVIWKKED-----GEFECVATLEGHENEVKCVAWSAS-GNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVK 154 (312)
T ss_pred ccceEEEeecCC-----CceeEEeeeeccccceeEEEEcCC-CCEEEEeeCCCeEEEEEecCCCcEEEEeeecccccccc
Confidence 999999997543 123445566799999999999998 999999999999999998754 47888999999999
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEecCCC---ceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceE
Q 001366 876 SVDFSQVHPTKLASGSDDCSVKLWNINEK---NSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWC 951 (1092)
Q Consensus 876 sv~fsp~~~~~laSgs~Dg~I~iWDl~~~---~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~ 951 (1092)
.|.|+| ...+|+|+|+|.+|++|+-..+ .+++++. +...|.+++|++.|. .|++++.|++|+||-....
T Consensus 155 ~V~WHP-t~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~-rl~s~sdD~tv~Iw~~~~~----- 227 (312)
T KOG0645|consen 155 HVIWHP-TEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGS-RLVSCSDDGTVSIWRLYTD----- 227 (312)
T ss_pred EEEEcC-CcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCc-eEEEecCCcceEeeeeccC-----
Confidence 999999 7789999999999999987732 4677887 456899999999995 8999999999999987632
Q ss_pred EecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecC-CCEEEEEecCCcE
Q 001366 952 VLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTA-DGYIACGSESNEV 1030 (1092)
Q Consensus 952 ~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spd-g~~lasgs~Dg~I 1030 (1092)
.-.-|+..++.+.|. ++.|+|++.|+.|+||.-.... ..+........-..|...||+|.|.|. ...|++||.||.|
T Consensus 228 ~~~~~sr~~Y~v~W~-~~~IaS~ggD~~i~lf~~s~~~-d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v 305 (312)
T KOG0645|consen 228 LSGMHSRALYDVPWD-NGVIASGGGDDAIRLFKESDSP-DEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIV 305 (312)
T ss_pred cchhcccceEeeeec-ccceEeccCCCEEEEEEecCCC-CCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceE
Confidence 123478899999998 7899999999999999876321 111111222244569999999999995 6789999999999
Q ss_pred EEEeC
Q 001366 1031 YAYHR 1035 (1092)
Q Consensus 1031 ~Iwd~ 1035 (1092)
++|.+
T Consensus 306 ~~W~l 310 (312)
T KOG0645|consen 306 NFWEL 310 (312)
T ss_pred EEEEe
Confidence 99975
No 125
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.96 E-value=6.7e-30 Score=292.92 Aligned_cols=246 Identities=13% Similarity=0.079 Sum_probs=178.6
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.++.|.||++... ..+..++.|+...... .........+..++...+||+++.+......+...+
T Consensus 11 ~G~~g~Vy~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~--------- 77 (330)
T cd05601 11 RGHFGEVQVVREK----ATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLY--------- 77 (330)
T ss_pred eccCEEEEEEEEC----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEE---------
Confidence 3478999998753 2345555555432211 112223344556677789999998765544333222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++|||++|++|.++++.....+++..++.++.||+.||+|||++||+||||||+|||++..+.+||+|||+++
T Consensus 78 -------lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~ 150 (330)
T cd05601 78 -------LVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAA 150 (330)
T ss_pred -------EEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCe
Confidence 3899999999999998775578888999999999999999999999999999999999999999999999987
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+.....
T Consensus 151 ~~~~~~~------------------------------------------------------------------------- 157 (330)
T cd05601 151 RLTANKM------------------------------------------------------------------------- 157 (330)
T ss_pred ECCCCCc-------------------------------------------------------------------------
Confidence 6431000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc------CCCCCccccchhhhHHHHHHcCC---
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS------GGVCTTSSNIYSLGVLFFELFGR--- 528 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~------~~~~t~~sDIwSLGvll~ell~~--- 528 (1092)
.......||+.|+|||++. +..++.++|||||||+||||+++
T Consensus 158 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~P 208 (330)
T cd05601 158 -----------------------------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSP 208 (330)
T ss_pred -----------------------------eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCC
Confidence 0001346899999999987 45678999999999999999986
Q ss_pred CCcHHHHHHHHHhcccc--CCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 529 FDSERALAAAMSDLRDR--ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 529 f~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|............+... ...|.....++.+.+|+.+||+ +|.+||++.+++.||||...
T Consensus 209 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 209 FHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred CCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 43333322222222211 1123334567889999999998 99999999999999999763
No 126
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.96 E-value=6.1e-30 Score=292.76 Aligned_cols=243 Identities=14% Similarity=0.095 Sum_probs=175.3
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhh-hhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAG-AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
.+|.|.||++... ..+..++.|+....... ........+ ..++....|||++.+......+...+
T Consensus 5 ~G~~g~V~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~-------- 72 (325)
T cd05604 5 KGSFGKVLLAKRK----LDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLY-------- 72 (325)
T ss_pred eCCCeEEEEEEEC----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEE--------
Confidence 4678999998752 22455566655322111 111111222 23466789999998765544333333
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
++|||+.|++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 73 --------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~ 143 (325)
T cd05604 73 --------FVLDFVNGGELFFHLQRER-SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLC 143 (325)
T ss_pred --------EEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCc
Confidence 3899999999999997654 5677799999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.....
T Consensus 144 ~~~~~~-------------------------------------------------------------------------- 149 (325)
T cd05604 144 KEGIAQ-------------------------------------------------------------------------- 149 (325)
T ss_pred ccCCCC--------------------------------------------------------------------------
Confidence 642200
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
.......+||+.|+|||++.+..++.++|||||||+||||++| |....
T Consensus 150 -----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~ 200 (325)
T cd05604 150 -----------------------------SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD 200 (325)
T ss_pred -----------------------------CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC
Confidence 0001145789999999999999999999999999999999986 43333
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH----HHHhhhhhhhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT----REILQSEVTNEF 588 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa----~eiL~~~~~~~~ 588 (1092)
........+.... ...+..++.+.+++.+||+++|.+||++ .+++.||||...
T Consensus 201 ~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 201 VAEMYDNILHKPL--VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred HHHHHHHHHcCCc--cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 2222222222211 1122457888999999999999999987 489999999753
No 127
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=8.8e-30 Score=292.22 Aligned_cols=248 Identities=17% Similarity=0.165 Sum_probs=173.1
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC---chhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM---PSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
.+|.|+||++...... ..+..++.|++..... .........+..++... .||+++.+......+...+
T Consensus 10 ~G~~g~Vy~~~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~------- 81 (332)
T cd05614 10 TGAYGKVFLVRKVTGH-DTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH------- 81 (332)
T ss_pred ecCCEEEEEEEEcccC-CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE-------
Confidence 3578999987652211 1245555555422111 11122233445556665 5888887655433222222
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
.+|||+.|++|.+++...+ .+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus 82 ---------lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~ 151 (332)
T cd05614 82 ---------LILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGL 151 (332)
T ss_pred ---------EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcC
Confidence 3899999999999997654 467779999999999999999999999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++......
T Consensus 152 ~~~~~~~~------------------------------------------------------------------------ 159 (332)
T cd05614 152 SKEFLSEE------------------------------------------------------------------------ 159 (332)
T ss_pred CccccccC------------------------------------------------------------------------
Confidence 86533100
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHcCC---CCc
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGR---FDS 531 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell~~---f~~ 531 (1092)
.......+||+.|+|||++.+. .++.++|||||||+||||+++ |..
T Consensus 160 ------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 209 (332)
T cd05614 160 ------------------------------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTL 209 (332)
T ss_pred ------------------------------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCC
Confidence 0000135789999999999874 478999999999999999986 321
Q ss_pred H---HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 532 E---RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 532 ~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
. .........+.. ..++.....++.+.+|+.+||+.||++|| ++.++++||||...
T Consensus 210 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 210 EGERNTQSEVSRRILK-CDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred CCCCCCHHHHHHHHhc-CCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 1 111111111111 11222334578899999999999999999 78899999999763
No 128
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.96 E-value=2.4e-29 Score=290.01 Aligned_cols=255 Identities=15% Similarity=0.231 Sum_probs=175.4
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.+ ++.|+||++.... .+..++.|+...... ........++...+...+|||++.+++.........
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-- 90 (343)
T cd07878 17 YQNLTPVGSGAYGSVCSAYDTR----LRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE-- 90 (343)
T ss_pred hhhheecccCCCeEEEEEEECC----CCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc--
Confidence 4444444 4789999997532 244555554422111 112233446677888889999998765433211111
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
. +.....+|+++ |++|.++++.. .++..+++.++.||+.||+|||++||+||||||+||+++.++.+|+
T Consensus 91 ---~-----~~~~~~~~~~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl 159 (343)
T cd07878 91 ---N-----FNEVYLVTNLM-GADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRI 159 (343)
T ss_pred ---c-----cCcEEEEeecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEE
Confidence 0 01111245554 88999988643 5778899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++....
T Consensus 160 ~Dfg~~~~~~~--------------------------------------------------------------------- 170 (343)
T cd07878 160 LDFGLARQADD--------------------------------------------------------------------- 170 (343)
T ss_pred cCCccceecCC---------------------------------------------------------------------
Confidence 99998865320
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~- 528 (1092)
..+..+||++|+|||++.+ ..++.++|||||||+||||+++
T Consensus 171 -------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~ 213 (343)
T cd07878 171 -------------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGK 213 (343)
T ss_pred -------------------------------------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCC
Confidence 0013468999999999987 5689999999999999999986
Q ss_pred --CCcHHHHHHHHHhcc--cc----------------------CCC-----CCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001366 529 --FDSERALAAAMSDLR--DR----------------------ILP-----PSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~--~~----------------------~~p-----~~~~~~~~~~~~li~~lL~~dP~~Rpsa~ 577 (1092)
|.............. .. ..+ ..+...++.+.+|+.+||++||.+|||+.
T Consensus 214 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ 293 (343)
T cd07878 214 ALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISAS 293 (343)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHH
Confidence 443221111111000 00 001 11234567788999999999999999999
Q ss_pred HHhhhhhhhhhhcc
Q 001366 578 EILQSEVTNEFQEV 591 (1092)
Q Consensus 578 eiL~~~~~~~~~~~ 591 (1092)
|+|+||||......
T Consensus 294 ell~hp~~~~~~~~ 307 (343)
T cd07878 294 EALAHPYFSQYHDP 307 (343)
T ss_pred HHhcCcchhccCCC
Confidence 99999999875443
No 129
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.3e-27 Score=276.92 Aligned_cols=272 Identities=16% Similarity=0.298 Sum_probs=227.1
Q ss_pred cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeec
Q 001366 747 RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS 826 (1092)
Q Consensus 747 ~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~ 826 (1092)
.|++-..|.+.+|+|....+. ..|..|.++|+.|+|+|++.+|++||+|.+|+||++.. ..+.....+
T Consensus 24 ILtslHsG~IQlWDYRM~tli-----~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~-------rrclftL~G 91 (1202)
T KOG0292|consen 24 ILTSLHSGVIQLWDYRMGTLI-----DRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKT-------RRCLFTLLG 91 (1202)
T ss_pred EEEeecCceeeeehhhhhhHH-----hhhhccCCccceeeecCCCCeEEecCCccEEEEEeccc-------ceehhhhcc
Confidence 467778899999998764322 25779999999999999999999999999999999875 344556788
Q ss_pred CCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCc-
Q 001366 827 NRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN- 905 (1092)
Q Consensus 827 h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~- 905 (1092)
|-..|..+.|++. --+|+|+|.|.||+||+..+++++..++||..-|.|..|+| ...+++|+|-|.+|+|||+..-+
T Consensus 92 HlDYVRt~~FHhe-yPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhp-tEDlIVSaSLDQTVRVWDisGLRk 169 (1202)
T KOG0292|consen 92 HLDYVRTVFFHHE-YPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHP-TEDLIVSASLDQTVRVWDISGLRK 169 (1202)
T ss_pred ccceeEEeeccCC-CceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCC-ccceEEEecccceEEEEeecchhc
Confidence 9999999999987 78999999999999999999999999999999999999999 77899999999999999996210
Q ss_pred --------------------------ee--eeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCc-ceEEecC
Q 001366 906 --------------------------SL--ATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA-PWCVLAG 955 (1092)
Q Consensus 906 --------------------------~l--~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~-~~~~l~~ 955 (1092)
.+ +.+. |...|+.++|+|.-+ ++++|+.|..|++|.....+. .+.+..|
T Consensus 170 k~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlp-liVSG~DDRqVKlWrmnetKaWEvDtcrg 248 (1202)
T KOG0292|consen 170 KNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLP-LIVSGADDRQVKLWRMNETKAWEVDTCRG 248 (1202)
T ss_pred cCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcc-eEEecCCcceeeEEEeccccceeehhhhc
Confidence 00 1112 566899999999886 999999999999999886543 3567889
Q ss_pred CCCCeEEEEEcC-CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEe
Q 001366 956 HEKAVSYVKFLD-SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYH 1034 (1092)
Q Consensus 956 H~~~V~~v~fs~-~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd 1034 (1092)
|.+.|+++-|++ .+.++|.|.|++|+|||+. ....+.++.......+.++.+|...++|+|-+ +-+.||-
T Consensus 249 H~nnVssvlfhp~q~lIlSnsEDksirVwDm~--------kRt~v~tfrrendRFW~laahP~lNLfAAgHD-sGm~VFk 319 (1202)
T KOG0292|consen 249 HYNNVSSVLFHPHQDLILSNSEDKSIRVWDMT--------KRTSVQTFRRENDRFWILAAHPELNLFAAGHD-SGMIVFK 319 (1202)
T ss_pred ccCCcceEEecCccceeEecCCCccEEEEecc--------cccceeeeeccCCeEEEEEecCCcceeeeecC-CceEEEE
Confidence 999999999994 5678899999999999998 35667888766778899999999988877754 4466776
Q ss_pred CCCCCcee
Q 001366 1035 RSLPMPIT 1042 (1092)
Q Consensus 1035 ~~~~~~i~ 1042 (1092)
+..-.|..
T Consensus 320 leRErpa~ 327 (1202)
T KOG0292|consen 320 LERERPAY 327 (1202)
T ss_pred EcccCceE
Confidence 65443433
No 130
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.96 E-value=8.1e-30 Score=297.89 Aligned_cols=291 Identities=13% Similarity=0.082 Sum_probs=181.0
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++... ..+..++.|+..-... ........++..++....|||++.++.....+...+
T Consensus 11 ~G~~g~Vy~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~--------- 77 (377)
T cd05629 11 KGAFGEVRLVQKK----DTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLY--------- 77 (377)
T ss_pred ecCCEEEEEEEEC----CCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeE---------
Confidence 3578999998752 2345566655422111 111222334566778889999998877655433333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++||||+|++|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++.+|++|||+++
T Consensus 78 -------lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~ 149 (377)
T cd05629 78 -------LIMEFLPGGDLMTMLIKYD-TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLST 149 (377)
T ss_pred -------EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccc
Confidence 3899999999999997654 46777899999999999999999999999999999999999999999999997
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+....... ..++....... . + +..+......+...+ .....
T Consensus 150 ~~~~~~~~~--------~~~~~~~~~~~-------~------~-----------~~~~~~~~~~~~~~~-----~~~~~- 191 (377)
T cd05629 150 GFHKQHDSA--------YYQKLLQGKSN-------K------N-----------RIDNRNSVAVDSINL-----TMSSK- 191 (377)
T ss_pred ccccccccc--------ccccccccccc-------c------c-----------ccccccccccccccc-----cccch-
Confidence 543211000 00000000000 0 0 000000000000000 00000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
.. ...............+||+.|+|||++.+..++.++|||||||+||||++| |.....
T Consensus 192 ~~------------------~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~ 253 (377)
T cd05629 192 DQ------------------IATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENS 253 (377)
T ss_pred hh------------------hhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCH
Confidence 00 000000000001146799999999999998999999999999999999986 433333
Q ss_pred HHHHHHhcc--ccCCCCCCCCCChhHHHHHHhccccCCCCC---CCHHHHhhhhhhhhh
Q 001366 535 LAAAMSDLR--DRILPPSFLSENPKEAGFCLWQLHPEPLSR---PTTREILQSEVTNEF 588 (1092)
Q Consensus 535 ~~~~~~~~~--~~~~p~~~~~~~~~~~~li~~lL~~dP~~R---psa~eiL~~~~~~~~ 588 (1092)
......... .....|.....++.+.+|+.+||. +|.+| +++.+++.||||...
T Consensus 254 ~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 254 HETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred HHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 222222222 222223333457889999999997 77765 599999999999763
No 131
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.96 E-value=1.1e-29 Score=289.81 Aligned_cols=242 Identities=17% Similarity=0.155 Sum_probs=175.8
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
.+|.|+||++.... .+..++.|+...... .........+..++... .|||++.++.........+
T Consensus 5 ~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~-------- 72 (318)
T cd05570 5 KGSFGKVLLAELKG----TDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLF-------- 72 (318)
T ss_pred eCCCeEEEEEEECC----CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEE--------
Confidence 46789999997632 244555555432111 11122223333444433 7999998776544333333
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
++|||+.|++|.+++...+ .+++.++..++.||+.||.|||++||+||||||+||+++.++.+|++|||++
T Consensus 73 --------lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 143 (318)
T cd05570 73 --------FVMEYVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMC 143 (318)
T ss_pred --------EEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCC
Confidence 3899999999999997664 4777799999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.....
T Consensus 144 ~~~~~~-------------------------------------------------------------------------- 149 (318)
T cd05570 144 KEGILG-------------------------------------------------------------------------- 149 (318)
T ss_pred eecCcC--------------------------------------------------------------------------
Confidence 642200
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
.......+||+.|+|||.+.+..++.++|||||||++|||++| |....
T Consensus 150 -----------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~ 200 (318)
T cd05570 150 -----------------------------GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD 200 (318)
T ss_pred -----------------------------CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC
Confidence 0000134689999999999999999999999999999999986 44333
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH-----HHHhhhhhhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQSEVTNE 587 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa-----~eiL~~~~~~~ 587 (1092)
...............| ...++.+.+|+.+||++||.+||++ .++++||||..
T Consensus 201 ~~~~~~~i~~~~~~~~--~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~ 257 (318)
T cd05570 201 EDELFQSILEDEVRYP--RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257 (318)
T ss_pred HHHHHHHHHcCCCCCC--CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 3222222222222222 2347888999999999999999999 99999999966
No 132
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.96 E-value=5.4e-30 Score=299.21 Aligned_cols=286 Identities=14% Similarity=0.100 Sum_probs=181.7
Q ss_pred cccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
+|.|.||++.... .+..++.|+...... ........++..++....||+++.++.....+...+
T Consensus 12 G~~g~V~~a~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~---------- 77 (376)
T cd05598 12 GAFGEVCLVRKVD----TNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLY---------- 77 (376)
T ss_pred CCCeEEEEEEECC----CCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEE----------
Confidence 4789999987632 245556655422111 111222335566788889999998776654433333
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
++||||+||+|.++|...+ .++...++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..
T Consensus 78 ------lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~ 150 (376)
T cd05598 78 ------FVMDYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 150 (376)
T ss_pred ------EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcc
Confidence 3899999999999997765 466768899999999999999999999999999999999999999999999865
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+............+. .. .+.+. ..........
T Consensus 151 ~~~~~~~~~~~~~~~-----~~------------------------------------------~~~~~-~~~~~~~~~~ 182 (376)
T cd05598 151 FRWTHDSKYYQKGDH-----HR------------------------------------------QDSME-PSEEWSEIDR 182 (376)
T ss_pred ccccccccccccccc-----cc------------------------------------------ccccc-cccccccccc
Confidence 431100000000000 00 00000 0000000000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
+. ....... ...+.........+||+.|||||++.+..++.++|||||||+||||++| |......
T Consensus 183 ~~-----------~~~~~~~-~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~ 250 (376)
T cd05598 183 CR-----------LKPLERR-RKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPA 250 (376)
T ss_pred cc-----------ccchhhh-hhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHH
Confidence 00 0000000 0000001112256899999999999999999999999999999999986 5443333
Q ss_pred HHHHHhcc--ccCCCCCCCCCChhHHHHHHhccccCCCCCC---CHHHHhhhhhhhhh
Q 001366 536 AAAMSDLR--DRILPPSFLSENPKEAGFCLWQLHPEPLSRP---TTREILQSEVTNEF 588 (1092)
Q Consensus 536 ~~~~~~~~--~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp---sa~eiL~~~~~~~~ 588 (1092)
........ .....+.....++.+.+|+.+|+ .+|.+|+ ++.++++||||...
T Consensus 251 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 251 ETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred HHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence 22222222 11122333456788999999977 5999999 99999999999763
No 133
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.96 E-value=1.2e-29 Score=290.42 Aligned_cols=243 Identities=15% Similarity=0.131 Sum_probs=174.2
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCc--hh-hHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SD-AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
..+|.|+||++.... .+..++.|+....... .. .........++....||||+.+......+...+
T Consensus 4 g~G~fg~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~------- 72 (325)
T cd05602 4 GKGSFGKVLLARHKA----EEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY------- 72 (325)
T ss_pred eeCCCeEEEEEEECC----CCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEE-------
Confidence 346889999997632 2444555554321111 11 111112223456779999998765544333222
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
.+|||+.|++|.+++...+ .+....++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus 73 ---------lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~ 142 (325)
T cd05602 73 ---------FVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGL 142 (325)
T ss_pred ---------EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCC
Confidence 3899999999999997654 455668889999999999999999999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++......
T Consensus 143 a~~~~~~~------------------------------------------------------------------------ 150 (325)
T cd05602 143 CKENIEHN------------------------------------------------------------------------ 150 (325)
T ss_pred CcccccCC------------------------------------------------------------------------
Confidence 86532100
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcH
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
......+||+.|+|||++.+..++.++|||||||+||||+++ |...
T Consensus 151 -------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 199 (325)
T cd05602 151 -------------------------------GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 199 (325)
T ss_pred -------------------------------CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCC
Confidence 001145789999999999999999999999999999999986 4333
Q ss_pred HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHH----HHhhhhhhhh
Q 001366 533 RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR----EILQSEVTNE 587 (1092)
Q Consensus 533 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~----eiL~~~~~~~ 587 (1092)
.... .+..+..... ......++.+.+++.+||+++|.+||++. ++++|+||..
T Consensus 200 ~~~~-~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~ 256 (325)
T cd05602 200 NTAE-MYDNILNKPL-QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSP 256 (325)
T ss_pred CHHH-HHHHHHhCCc-CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCC
Confidence 3222 2222222211 12234578899999999999999999876 8999999865
No 134
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.96 E-value=1.3e-29 Score=289.41 Aligned_cols=242 Identities=16% Similarity=0.136 Sum_probs=173.8
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhh-hhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAG-AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
.+|.|.||++...+ .+..++.|+...... ........++ ..++...+|||++.+..........+
T Consensus 5 ~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~-------- 72 (321)
T cd05603 5 KGSFGKVLLAKRKS----DGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLY-------- 72 (321)
T ss_pred eCCCEEEEEEEECC----CCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEE--------
Confidence 46789999998632 244555555422111 1111222222 23567789999998765544332222
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
++||||+|++|.+++.... .+.+.++..++.||+.||+|||++||+||||||+||+|+.++.+||+|||++
T Consensus 73 --------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~ 143 (321)
T cd05603 73 --------FVLDYVNGGELFFHLQRER-CFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLC 143 (321)
T ss_pred --------EEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCC
Confidence 3899999999999997654 4666689999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+......
T Consensus 144 ~~~~~~~------------------------------------------------------------------------- 150 (321)
T cd05603 144 KEGVEPE------------------------------------------------------------------------- 150 (321)
T ss_pred ccCCCCC-------------------------------------------------------------------------
Confidence 6422000
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
......+||+.|+|||.+.+..++.++|||||||+||||+++ |....
T Consensus 151 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 200 (321)
T cd05603 151 ------------------------------ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD 200 (321)
T ss_pred ------------------------------CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC
Confidence 001145789999999999998999999999999999999986 43332
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH----HHHhhhhhhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT----REILQSEVTNE 587 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa----~eiL~~~~~~~ 587 (1092)
.. ..+..+..... +.....+..+.+++.+||+++|.+||++ .++++|+||..
T Consensus 201 ~~-~~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 201 VS-QMYDNILHKPL-QLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred HH-HHHHHHhcCCC-CCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCC
Confidence 22 22222222211 1223457788999999999999999976 49999999965
No 135
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1.6e-29 Score=293.19 Aligned_cols=234 Identities=18% Similarity=0.179 Sum_probs=169.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.++.|.||++.... .+..++.|+... .....+..++...+|||++.++.........+
T Consensus 76 ~G~~g~Vy~~~~~~----~~~~valK~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~----------- 133 (357)
T PHA03209 76 PGSEGRVFVATKPG----QPDPVVLKIGQK-------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITC----------- 133 (357)
T ss_pred CCCCeEEEEEEECC----CCceEEEEeCCc-------cccHHHHHHHHhCCCCCCcChhheEEeCCeeE-----------
Confidence 34789999998743 233444443211 12234666788889999998776655433222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+|+|+. ++|.+++......++..+++.|+.||+.||.|||++||+||||||+|||++..+.+|++|||+++..
T Consensus 134 -----lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 134 -----MVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFP 207 (357)
T ss_pred -----EEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCcccccc
Confidence 2678875 5899999777677888899999999999999999999999999999999999999999999988642
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
...
T Consensus 208 ~~~----------------------------------------------------------------------------- 210 (357)
T PHA03209 208 VVA----------------------------------------------------------------------------- 210 (357)
T ss_pred ccC-----------------------------------------------------------------------------
Confidence 200
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC----CCcH---
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR----FDSE--- 532 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~----f~~~--- 532 (1092)
.......||..|+|||++.+..++.++|||||||+||||+++ |...
T Consensus 211 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~ 263 (357)
T PHA03209 211 ---------------------------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPST 263 (357)
T ss_pred ---------------------------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCc
Confidence 000134688999999999999999999999999999999963 2210
Q ss_pred ---------HHHHHHHHhccccCCCCCC-------------------------------CCCChhHHHHHHhccccCCCC
Q 001366 533 ---------RALAAAMSDLRDRILPPSF-------------------------------LSENPKEAGFCLWQLHPEPLS 572 (1092)
Q Consensus 533 ---------~~~~~~~~~~~~~~~p~~~-------------------------------~~~~~~~~~li~~lL~~dP~~ 572 (1092)
......+..+. ..|+.+ ...+....+||.+||.+||.+
T Consensus 264 ~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 341 (357)
T PHA03209 264 PEEYVKSCHSHLLKIISTLK--VHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAM 341 (357)
T ss_pred HHHHHHHHHHHHHHHHHHhc--cChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCccc
Confidence 01111111110 111111 123455678999999999999
Q ss_pred CCCHHHHhhhhhhhh
Q 001366 573 RPTTREILQSEVTNE 587 (1092)
Q Consensus 573 Rpsa~eiL~~~~~~~ 587 (1092)
|||+.|+|+||||..
T Consensus 342 Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 342 RPSAEEILNYPMFAQ 356 (357)
T ss_pred CcCHHHHhcCchhcc
Confidence 999999999999964
No 136
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.96 E-value=1.8e-29 Score=294.17 Aligned_cols=253 Identities=16% Similarity=0.115 Sum_probs=180.9
Q ss_pred chhHHHhhhc--cccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 211 FSEFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 211 f~~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
..+|.+.+.+ ++.|.||++.... .+..++.|+...... .........+..++...+|||++.+......+..
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~ 117 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKS----SKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKY 117 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECC----CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 3455555544 4789999887632 244555555421111 1112223345667888899999987655443332
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
.+ ++||||+||+|.+++... .++...+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 118 ~~----------------lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~ 179 (370)
T cd05596 118 LY----------------MVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 179 (370)
T ss_pred EE----------------EEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCC
Confidence 22 389999999999999754 467778999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+||+|||+++......
T Consensus 180 ~~kL~DfG~~~~~~~~~--------------------------------------------------------------- 196 (370)
T cd05596 180 HLKLADFGTCMKMDANG--------------------------------------------------------------- 196 (370)
T ss_pred CEEEEeccceeeccCCC---------------------------------------------------------------
Confidence 99999999886543100
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC----CCCccccchhhhHHH
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG----VCTTSSNIYSLGVLF 522 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~----~~t~~sDIwSLGvll 522 (1092)
.......+||+.|+|||.+.+. .++.++|||||||+|
T Consensus 197 ---------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvil 237 (370)
T cd05596 197 ---------------------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 237 (370)
T ss_pred ---------------------------------------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHH
Confidence 0000135789999999998753 478999999999999
Q ss_pred HHHcCC---CCcHHHHHHHHHhccc--cCCCCCCCCCChhHHHHHHhccccCCCC--CCCHHHHhhhhhhhh
Q 001366 523 FELFGR---FDSERALAAAMSDLRD--RILPPSFLSENPKEAGFCLWQLHPEPLS--RPTTREILQSEVTNE 587 (1092)
Q Consensus 523 ~ell~~---f~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~li~~lL~~dP~~--Rpsa~eiL~~~~~~~ 587 (1092)
|||++| |............... ....|.....++.+.+||.+||..+|.+ |+++.++++||||..
T Consensus 238 yelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~ 309 (370)
T cd05596 238 YEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN 309 (370)
T ss_pred HHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence 999986 4443332222222222 1222334456888999999999999987 999999999999975
No 137
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.96 E-value=3.2e-28 Score=258.52 Aligned_cols=242 Identities=20% Similarity=0.341 Sum_probs=216.6
Q ss_pred eeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEec
Q 001366 822 AVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNI 901 (1092)
Q Consensus 822 ~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl 901 (1092)
.+..+|.+.|.||++.|. ..+|+||+.|++|+|||+.+|+...++.||-..|..|++++ -..++++++.|+.|+.||+
T Consensus 145 rVi~gHlgWVr~vavdP~-n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~-rHpYlFs~gedk~VKCwDL 222 (460)
T KOG0285|consen 145 RVISGHLGWVRSVAVDPG-NEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSK-RHPYLFSAGEDKQVKCWDL 222 (460)
T ss_pred hhhhhccceEEEEeeCCC-ceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecc-cCceEEEecCCCeeEEEec
Confidence 456789999999999998 89999999999999999999999999999999999999999 5568999999999999999
Q ss_pred CCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCe
Q 001366 902 NEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNK 979 (1092)
Q Consensus 902 ~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~ 979 (1092)
+..+.++.+. |-+.|.|++.+|.-. .|++|+.|.+++|||+|+.. .+.++.||..+|..|.+. -+..++|||.|++
T Consensus 223 e~nkvIR~YhGHlS~V~~L~lhPTld-vl~t~grDst~RvWDiRtr~-~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~t 300 (460)
T KOG0285|consen 223 EYNKVIRHYHGHLSGVYCLDLHPTLD-VLVTGGRDSTIRVWDIRTRA-SVHVLSGHTNPVASVMCQPTDPQVITGSHDST 300 (460)
T ss_pred hhhhhHHHhccccceeEEEeccccce-eEEecCCcceEEEeeecccc-eEEEecCCCCcceeEEeecCCCceEEecCCce
Confidence 9999988877 568999999999885 89999999999999999864 578999999999999997 4568999999999
Q ss_pred EEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccC
Q 001366 980 LKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDD 1059 (1092)
Q Consensus 980 I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~ 1059 (1092)
|++||++ .+....++..|...|.+++++|....+|++|.|+ |+-|++..+..+.. ..
T Consensus 301 vrlWDl~--------agkt~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~f~~n--------------ls 357 (460)
T KOG0285|consen 301 VRLWDLR--------AGKTMITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLPEGEFLQN--------------LS 357 (460)
T ss_pred EEEeeec--------cCceeEeeecccceeeEEecCCchhhhhccCCcc-ceeccCCccchhhc--------------cc
Confidence 9999999 5667888999999999999999999999999886 99998877765543 35
Q ss_pred CCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1060 DNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1060 ~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
+|+.-|++++...|+ ++++|+.+|.+.+||.
T Consensus 358 gh~~iintl~~nsD~-v~~~G~dng~~~fwdw 388 (460)
T KOG0285|consen 358 GHNAIINTLSVNSDG-VLVSGGDNGSIMFWDW 388 (460)
T ss_pred cccceeeeeeeccCc-eEEEcCCceEEEEEec
Confidence 778889999988775 5779999999999984
No 138
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.96 E-value=5.8e-30 Score=293.51 Aligned_cols=244 Identities=17% Similarity=0.174 Sum_probs=172.2
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCch--hhHhhhhhhhhhccC---CCCCCCccccceecCCCCCCCccCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS--DAALKAAGAMMVASN---ASPKPVGVGTAVVSNGSLDLGARTG 294 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1092)
.+|.|+||++... ..+..++.|+........ .......+..++... .||+++.+......+...+
T Consensus 3 ~G~~g~Vy~~~~~----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~------ 72 (330)
T cd05586 3 KGTFGQVYQVRKK----DTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLY------ 72 (330)
T ss_pred CCCceEEEEEEEC----CCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEE------
Confidence 4688999998763 234556666543221111 111122222333222 6999988765544333333
Q ss_pred CCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccc
Q 001366 295 VPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1092)
Q Consensus 295 ~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg 374 (1092)
.+|||+.|++|.+++...+ .++...++.++.||+.||+|||++||+||||||+|||++.++.+||+|||
T Consensus 73 ----------lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg 141 (330)
T cd05586 73 ----------LVTDYMSGGELFWHLQKEG-RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFG 141 (330)
T ss_pred ----------EEEcCCCCChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCC
Confidence 3899999999999997654 46777999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++......
T Consensus 142 ~a~~~~~~~----------------------------------------------------------------------- 150 (330)
T cd05586 142 LSKANLTDN----------------------------------------------------------------------- 150 (330)
T ss_pred cCcCCCCCC-----------------------------------------------------------------------
Confidence 876522000
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHcCC---CC
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGR---FD 530 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell~~---f~ 530 (1092)
......+||+.|+|||++.+. .++.++|||||||+||||+++ |.
T Consensus 151 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~ 198 (330)
T cd05586 151 --------------------------------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFY 198 (330)
T ss_pred --------------------------------CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCC
Confidence 001145689999999999764 489999999999999999986 43
Q ss_pred cHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC----CHHHHhhhhhhhhh
Q 001366 531 SERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP----TTREILQSEVTNEF 588 (1092)
Q Consensus 531 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp----sa~eiL~~~~~~~~ 588 (1092)
..... ..+..+............++.+.+|+.+||+++|.+|| ++.++++||||...
T Consensus 199 ~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 199 AEDTQ-QMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred CCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 33222 22222222211111123478889999999999999998 68999999999753
No 139
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.96 E-value=2.1e-29 Score=282.51 Aligned_cols=245 Identities=17% Similarity=0.166 Sum_probs=166.6
Q ss_pred cccceeeeCCCCCcccccccccccccccccc-Cc---hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MP---SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
+|.|+||++...+ .+..++.|+..... .. ..........+.+....|||++.+++......... ....
T Consensus 11 g~~g~v~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~----~~~~ 82 (288)
T cd07863 11 GAYGTVYKARDPH----SGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDR----ETKV 82 (288)
T ss_pred cCCeEEEEEEECC----CCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCC----CceE
Confidence 4789999998732 24445554332111 11 11112223333344557999998766533211100 0111
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
..+|||+.+ +|.+++.... ..++..+++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+
T Consensus 83 -------~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 83 -------TLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred -------EEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCc
Confidence 137888885 8999996543 3478889999999999999999999999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++.....
T Consensus 155 ~~~~~~~------------------------------------------------------------------------- 161 (288)
T cd07863 155 ARIYSCQ------------------------------------------------------------------------- 161 (288)
T ss_pred cccccCc-------------------------------------------------------------------------
Confidence 8653310
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcH
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
...+...||..|+|||++.+..++.++|||||||++|||+++ |...
T Consensus 162 -------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~ 210 (288)
T cd07863 162 -------------------------------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 210 (288)
T ss_pred -------------------------------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCC
Confidence 000134678899999999998999999999999999999986 3222
Q ss_pred HHHHH---HHHhcc---c-----------cCCC--------CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 533 RALAA---AMSDLR---D-----------RILP--------PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 533 ~~~~~---~~~~~~---~-----------~~~p--------~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
..... ...... . ..+. ...+..+.++.+|+.+||++||.+|||+.|++.||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 211 SEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred CHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 22111 111100 0 0000 0112345677899999999999999999999999997
No 140
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-27 Score=246.02 Aligned_cols=294 Identities=15% Similarity=0.185 Sum_probs=236.2
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001366 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1092)
Q Consensus 775 l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~ 854 (1092)
+.+|..+++-|.|+.+|++|.+++.|.++.||-... ........+|.+.|.|+..+-+ ...++||+.|.+++
T Consensus 6 l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~n-------GerlGty~GHtGavW~~Did~~-s~~liTGSAD~t~k 77 (327)
T KOG0643|consen 6 LQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLN-------GERLGTYDGHTGAVWCCDIDWD-SKHLITGSADQTAK 77 (327)
T ss_pred cccCccccceEEecCCCcEEEEecCCCCceEEEecC-------CceeeeecCCCceEEEEEecCC-cceeeeccccceeE
Confidence 568999999999999999999999999999997532 2344566789999999998876 78999999999999
Q ss_pred EEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeC-----CCcEEEEecC-------CCceeeeEe-cCCceEEEEE
Q 001366 855 LWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSD-----DCSVKLWNIN-------EKNSLATIK-NIANVCCVQF 921 (1092)
Q Consensus 855 IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~-----Dg~I~iWDl~-------~~~~l~~l~-~~~~V~sl~f 921 (1092)
|||+.+|+++..++ ...+|..+.|++ ++++++.+.+ .+.|.++|++ ...++..+. +.+.++.+-|
T Consensus 78 LWDv~tGk~la~~k-~~~~Vk~~~F~~-~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~W 155 (327)
T KOG0643|consen 78 LWDVETGKQLATWK-TNSPVKRVDFSF-GGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALW 155 (327)
T ss_pred EEEcCCCcEEEEee-cCCeeEEEeecc-CCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeee
Confidence 99999999999987 567899999999 7777766654 4679999998 345555555 5678999999
Q ss_pred ccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeE
Q 001366 922 SAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSL 1000 (1092)
Q Consensus 922 sp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~ 1000 (1092)
.|-+. .|++|..||.|..||++++...+.....|...|+.+.++ +..+++|+|.|.+-++||+++ -.+++
T Consensus 156 g~l~~-~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~t--------l~v~K 226 (327)
T KOG0643|consen 156 GPLGE-TIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRT--------LEVLK 226 (327)
T ss_pred cccCC-EEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccc--------eeeEE
Confidence 99985 899999999999999999988777888899999999999 677899999999999999993 45667
Q ss_pred EEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCC--ccccCCCCCCEEEEEEeCCCCEEE
Q 001366 1001 TFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISG--KETDDDNGLFVSSVCWRRRSDMVV 1078 (1092)
Q Consensus 1001 ~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~--~~~~~~h~~~V~sva~spd~~~La 1078 (1092)
++.. ..+||+.+++|....+++|+.....-|=-.....-....+| .+.+.. .....+|-++|++|+|+|+|...+
T Consensus 227 ty~t-e~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArF--yh~i~eEEigrvkGHFGPINsvAfhPdGksYs 303 (327)
T KOG0643|consen 227 TYTT-ERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARF--YHLIFEEEIGRVKGHFGPINSVAFHPDGKSYS 303 (327)
T ss_pred Eeee-cccccceecccccceEEecCCceeeeeeeecccccchhhhH--HHHHHHHHhccccccccCcceeEECCCCcccc
Confidence 7764 56899999999988888887654433322111111011111 011111 123468899999999999999999
Q ss_pred EEecCCeEEEEE
Q 001366 1079 AANSSGCIKVLQ 1090 (1092)
Q Consensus 1079 sgs~DG~V~vW~ 1090 (1092)
+|+.||.|+|.-
T Consensus 304 SGGEDG~VR~h~ 315 (327)
T KOG0643|consen 304 SGGEDGYVRLHH 315 (327)
T ss_pred cCCCCceEEEEE
Confidence 999999999864
No 141
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.96 E-value=8.7e-29 Score=258.90 Aligned_cols=287 Identities=16% Similarity=0.241 Sum_probs=241.7
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCC-CCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEE
Q 001366 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFN-DSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKL 855 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~-~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~I 855 (1092)
+..+-+-|..|+|||+||++|+.||-|.+|++.+... +..........+-++.+|.|++|+.| ..+||+|+.||.|++
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRD-sEMlAsGsqDGkIKv 289 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRD-SEMLASGSQDGKIKV 289 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeeccc-HHHhhccCcCCcEEE
Confidence 4455677889999999999999999999999876332 22223333455678999999999998 899999999999999
Q ss_pred EECCCCceEEEee-ccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEE
Q 001366 856 WDACTGQTVSHYI-EHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGS 933 (1092)
Q Consensus 856 WD~~tg~~i~~l~-~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs 933 (1092)
|.+.+|+|++.|. .|++.|+|+.|+. ++..++++|.|.++++.-+.+|+++..+. |.+-|+...|.++|. .+++++
T Consensus 290 Wri~tG~ClRrFdrAHtkGvt~l~FSr-D~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~-~iisaS 367 (508)
T KOG0275|consen 290 WRIETGQCLRRFDRAHTKGVTCLSFSR-DNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGH-HIISAS 367 (508)
T ss_pred EEEecchHHHHhhhhhccCeeEEEEcc-CcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCC-eEEEec
Confidence 9999999999997 8999999999999 88899999999999999999999999998 567799999999995 899999
Q ss_pred CCCeEEEEEcCCCCcceEEec--CCCCCeEEEEEc--CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCC---C
Q 001366 934 ADYRTYCYDLRNARAPWCVLA--GHEKAVSYVKFL--DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGH---T 1006 (1092)
Q Consensus 934 ~Dg~I~vwDlr~~~~~~~~l~--~H~~~V~~v~fs--~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h---~ 1006 (1092)
.||+|++|+..+.+. +.++. +..-+|.+|-.. +...++.+...++|.|-++. +..++++..- .
T Consensus 368 sDgtvkvW~~KtteC-~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q---------GQvVrsfsSGkREg 437 (508)
T KOG0275|consen 368 SDGTVKVWHGKTTEC-LSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ---------GQVVRSFSSGKREG 437 (508)
T ss_pred CCccEEEecCcchhh-hhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc---------ceEEeeeccCCccC
Confidence 999999999998764 34443 345577777765 56789999999999999987 5667776532 2
Q ss_pred CCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeE
Q 001366 1007 NEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCI 1086 (1092)
Q Consensus 1007 ~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V 1086 (1092)
+...+.++||.|.++.|.++|+.++.|...+|+.-.+. .-|..-|-.++-+|..+.||+-+.||.+
T Consensus 438 GdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl--------------~VhEkdvIGl~HHPHqNllAsYsEDgll 503 (508)
T KOG0275|consen 438 GDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTL--------------PVHEKDVIGLTHHPHQNLLASYSEDGLL 503 (508)
T ss_pred CceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeee--------------ecccccccccccCcccchhhhhcccchh
Confidence 34556789999999999999999999998887765544 3456678899999999999999999999
Q ss_pred EEEE
Q 001366 1087 KVLQ 1090 (1092)
Q Consensus 1087 ~vW~ 1090 (1092)
++|.
T Consensus 504 KLWk 507 (508)
T KOG0275|consen 504 KLWK 507 (508)
T ss_pred hhcC
Confidence 9995
No 142
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1.4e-29 Score=300.78 Aligned_cols=245 Identities=18% Similarity=0.147 Sum_probs=175.5
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+...+ +++|.||++...+ .+..++.|.. ......++..++...+|||++.++.....+...+
T Consensus 171 y~i~~~Lg~G~~G~Vy~a~~~~----~~~~vavK~~-------~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~--- 236 (461)
T PHA03211 171 FAIHRALTPGSEGCVFESSHPD----YPQRVVVKAG-------WYASSVHEARLLRRLSHPAVLALLDVRVVGGLTC--- 236 (461)
T ss_pred eEEEEEEccCCCeEEEEEEECC----CCCEEEEecc-------cccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEE---
Confidence 3444434 5789999998743 2344444422 1122345677888899999998877654433333
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
++|+++. ++|.+++......++..+++.|+.||+.||.|||++||+||||||+||||+.++.+||+
T Consensus 237 -------------lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~ 302 (461)
T PHA03211 237 -------------LVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLG 302 (461)
T ss_pred -------------EEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEc
Confidence 2678775 69999997766678888999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++.+.....
T Consensus 303 DFGla~~~~~~~~------------------------------------------------------------------- 315 (461)
T PHA03211 303 DFGAACFARGSWS------------------------------------------------------------------- 315 (461)
T ss_pred ccCCceecccccc-------------------------------------------------------------------
Confidence 9999876431000
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR--- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~--- 528 (1092)
........||..|+|||++.+..++.++|||||||+||||+++
T Consensus 316 ----------------------------------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~ 361 (461)
T PHA03211 316 ----------------------------------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTAS 361 (461)
T ss_pred ----------------------------------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCC
Confidence 0000135689999999999999999999999999999999863
Q ss_pred -CCc---------HHHHHHHHHhccc--cCCC----------------------------CCCCCCChhHHHHHHhcccc
Q 001366 529 -FDS---------ERALAAAMSDLRD--RILP----------------------------PSFLSENPKEAGFCLWQLHP 568 (1092)
Q Consensus 529 -f~~---------~~~~~~~~~~~~~--~~~p----------------------------~~~~~~~~~~~~li~~lL~~ 568 (1092)
|.. .......+..... ..++ ..+...++.+.+|+.+||.+
T Consensus 362 lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~ 441 (461)
T PHA03211 362 LFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTF 441 (461)
T ss_pred cccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHccc
Confidence 211 1111111111110 0011 01123456788999999999
Q ss_pred CCCCCCCHHHHhhhhhhhh
Q 001366 569 EPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 569 dP~~Rpsa~eiL~~~~~~~ 587 (1092)
||.+|||+.|+|+||||..
T Consensus 442 DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 442 DGARRPSAAELLRLPLFQS 460 (461)
T ss_pred ChhhCcCHHHHhhCcccCC
Confidence 9999999999999999964
No 143
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96 E-value=3.3e-29 Score=287.69 Aligned_cols=248 Identities=17% Similarity=0.175 Sum_probs=177.6
Q ss_pred HHHhhh--ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTT--LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~--~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+. .++.|.||++.... .+..++.|+..............++.+++....|||++.++.....+...+
T Consensus 7 y~~~~~lg~g~~g~V~~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--- 79 (333)
T cd06650 7 FEKISELGAGNGGVVFKVSHKP----SGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS--- 79 (333)
T ss_pred hheeccccCCCCEEEEEEEECC----CCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEE---
Confidence 444443 34789999987632 234445544322212222233456667788889999998776655443333
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhc-CccccCCCCCCeEEccCCcEEE
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~-gIvHrDLKP~Nill~~~~~vkl 370 (1092)
++|||+.|++|.++|+..+ .++...+..++.||+.||.|||++ +|+||||||+|||++.++.+|+
T Consensus 80 -------------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL 145 (333)
T cd06650 80 -------------ICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL 145 (333)
T ss_pred -------------EEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEE
Confidence 3799999999999997754 467778899999999999999975 7999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++.+....
T Consensus 146 ~Dfg~~~~~~~~~------------------------------------------------------------------- 158 (333)
T cd06650 146 CDFGVSGQLIDSM------------------------------------------------------------------- 158 (333)
T ss_pred eeCCcchhhhhhc-------------------------------------------------------------------
Confidence 9999876533100
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC--
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR-- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~-- 528 (1092)
.....||..|+|||.+.+..++.++|||||||++|||+++
T Consensus 159 --------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~ 200 (333)
T cd06650 159 --------------------------------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRY 200 (333)
T ss_pred --------------------------------------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 0134578899999999998899999999999999999986
Q ss_pred -CCcHHH--HHHHHH-----------------------------------------hccccCCCCCC--CCCChhHHHHH
Q 001366 529 -FDSERA--LAAAMS-----------------------------------------DLRDRILPPSF--LSENPKEAGFC 562 (1092)
Q Consensus 529 -f~~~~~--~~~~~~-----------------------------------------~~~~~~~p~~~--~~~~~~~~~li 562 (1092)
|..... ....+. .+.. ..++.+ ...++++.+|+
T Consensus 201 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li 279 (333)
T cd06650 201 PIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVN-EPPPKLPSGVFGAEFQDFV 279 (333)
T ss_pred CCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhc-CCCccCCCCCcCHHHHHHH
Confidence 332211 111100 0000 011111 12457788999
Q ss_pred HhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 563 LWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 563 ~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
.+||++||.+|||+.|++.||||...
T Consensus 280 ~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 280 NKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred HHhccCCcccCcCHHHHhhCHHHhcC
Confidence 99999999999999999999999753
No 144
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.96 E-value=2.7e-29 Score=292.48 Aligned_cols=245 Identities=17% Similarity=0.104 Sum_probs=175.7
Q ss_pred ccccceeeeCCCCCcccccccccccccccccc--CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTT--MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++.... .+..++.|+..... ...+......+..++....|||++.++.....+...+
T Consensus 53 ~G~fg~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~--------- 119 (370)
T cd05621 53 RGAFGEVQLVRHKS----SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY--------- 119 (370)
T ss_pred ecCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE---------
Confidence 34789999887632 24445555442111 1112223345566777889999998776654333333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
.+||||+||+|.++++.. .++..+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus 120 -------lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~ 190 (370)
T cd05621 120 -------MVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCM 190 (370)
T ss_pred -------EEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccce
Confidence 389999999999999754 46777899999999999999999999999999999999999999999999987
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.......
T Consensus 191 ~~~~~~~------------------------------------------------------------------------- 197 (370)
T cd05621 191 KMDETGM------------------------------------------------------------------------- 197 (370)
T ss_pred ecccCCc-------------------------------------------------------------------------
Confidence 6431000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC----CCCccccchhhhHHHHHHcCC---CC
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG----VCTTSSNIYSLGVLFFELFGR---FD 530 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~----~~t~~sDIwSLGvll~ell~~---f~ 530 (1092)
......+||+.|+|||++.+. .++.++|||||||+||||++| |.
T Consensus 198 -----------------------------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~ 248 (370)
T cd05621 198 -----------------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY 248 (370)
T ss_pred -----------------------------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCC
Confidence 001145799999999999763 378999999999999999986 44
Q ss_pred cHHHHHHHHHhccc--cCCCCCCCCCChhHHHHHHhccccCCCC--CCCHHHHhhhhhhhhh
Q 001366 531 SERALAAAMSDLRD--RILPPSFLSENPKEAGFCLWQLHPEPLS--RPTTREILQSEVTNEF 588 (1092)
Q Consensus 531 ~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~li~~lL~~dP~~--Rpsa~eiL~~~~~~~~ 588 (1092)
.............. ....|.....++...+|+.+||..+|.. |+++.|+++||||...
T Consensus 249 ~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 249 ADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred CCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 43332222222221 1222333456788999999999855543 8999999999999763
No 145
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.96 E-value=3.2e-29 Score=285.34 Aligned_cols=249 Identities=16% Similarity=0.183 Sum_probs=166.5
Q ss_pred hhhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 217 KTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 217 ~~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
+...++.|+||++...+. ..+..++.|+...... .....++..++...+|||++.+...........
T Consensus 8 ~lG~G~~g~Vy~~~~~~~--~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-------- 74 (317)
T cd07868 8 KVGRGTYGHVYKAKRKDG--KDDRDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRK-------- 74 (317)
T ss_pred ccccCCCeEEEEEEEccC--CCCceEEEEEECCCCC---cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcE--------
Confidence 445567899999975331 1123344444322211 123456777888999999998765543211110
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcC--------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE----cc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARG--------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL----LQ 364 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~--------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill----~~ 364 (1092)
. .++|+|+. ++|.+++.... ..++...++.|++||+.||+|||++||+||||||+|||+ ..
T Consensus 75 -~-----~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~ 147 (317)
T cd07868 75 -V-----WLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPE 147 (317)
T ss_pred -E-----EEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCC
Confidence 1 13577765 58998885321 246777899999999999999999999999999999999 45
Q ss_pred CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 365 ~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
.+.+|++|||+++.......
T Consensus 148 ~~~~kl~DfG~a~~~~~~~~------------------------------------------------------------ 167 (317)
T cd07868 148 RGRVKIADMGFARLFNSPLK------------------------------------------------------------ 167 (317)
T ss_pred cCcEEEeecCceeccCCCCc------------------------------------------------------------
Confidence 67899999999876431000
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFF 523 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ 523 (1092)
+.......+||++|+|||++.+ ..++.++|||||||++|
T Consensus 168 ----------------------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 207 (317)
T cd07868 168 ----------------------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFA 207 (317)
T ss_pred ----------------------------------------cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHH
Confidence 0011124578999999999987 45899999999999999
Q ss_pred HHcCC---CCcHHH------------HHHHHHh------------------------ccccCC---------CCCCCCCC
Q 001366 524 ELFGR---FDSERA------------LAAAMSD------------------------LRDRIL---------PPSFLSEN 555 (1092)
Q Consensus 524 ell~~---f~~~~~------------~~~~~~~------------------------~~~~~~---------p~~~~~~~ 555 (1092)
||+++ |..... ....... ...... .......+
T Consensus 208 el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (317)
T cd07868 208 ELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPD 287 (317)
T ss_pred HHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCC
Confidence 99986 321110 0000000 000000 00011234
Q ss_pred hhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 556 PKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 556 ~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
+.+.+|+.+||++||.+|||++|+|+||||
T Consensus 288 ~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 288 SKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred hHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 567899999999999999999999999997
No 146
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=8.3e-28 Score=270.39 Aligned_cols=240 Identities=20% Similarity=0.341 Sum_probs=222.2
Q ss_pred cCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCc
Q 001366 826 SNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN 905 (1092)
Q Consensus 826 ~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~ 905 (1092)
.+..+|.+|.++|. ..+++++-++|.|.||+.++...++.|.-..-+|.+..|-+ ..+.+++|++|..|+||+.+++.
T Consensus 11 ~rSdRVKsVd~HPt-ePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfia-RknWiv~GsDD~~IrVfnynt~e 88 (794)
T KOG0276|consen 11 SRSDRVKSVDFHPT-EPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIA-RKNWIVTGSDDMQIRVFNYNTGE 88 (794)
T ss_pred ccCCceeeeecCCC-CceEEEeeecCeeEEEecccceeeeeeeecccchhhheeee-ccceEEEecCCceEEEEecccce
Confidence 36789999999998 88999999999999999999999999998889999999998 78899999999999999999999
Q ss_pred eeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc--CCCEEEEEECCCeEEE
Q 001366 906 SLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL--DSGTLVTASTDNKLKL 982 (1092)
Q Consensus 906 ~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs--~~~~L~Sgs~Dg~I~v 982 (1092)
.+.+|. |..-|.|++.+|..+ ++++++.|-+|++||-.+.-....++.||...|.+|+|. +.+.++|+|-|++|+|
T Consensus 89 kV~~FeAH~DyIR~iavHPt~P-~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKV 167 (794)
T KOG0276|consen 89 KVKTFEAHSDYIRSIAVHPTLP-YVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKV 167 (794)
T ss_pred eeEEeeccccceeeeeecCCCC-eEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEE
Confidence 999998 678899999999997 899999999999999988777778999999999999998 6678999999999999
Q ss_pred EEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCC--CEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCC
Q 001366 983 WDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTAD--GYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDD 1060 (1092)
Q Consensus 983 WDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg--~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~ 1060 (1092)
|.+. ...+..++.+|...|++|.+-+-| .||++|++|.+|+|||..+..++++. ++
T Consensus 168 Wslg--------s~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TL--------------eG 225 (794)
T KOG0276|consen 168 WSLG--------SPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTL--------------EG 225 (794)
T ss_pred EEcC--------CCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHh--------------hc
Confidence 9998 456788999999999999998754 59999999999999999988877654 68
Q ss_pred CCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1061 NGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1061 h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
|..-|+.++|+|.-.+++||+.||+||||.
T Consensus 226 Ht~Nvs~v~fhp~lpiiisgsEDGTvriWh 255 (794)
T KOG0276|consen 226 HTNNVSFVFFHPELPIIISGSEDGTVRIWN 255 (794)
T ss_pred ccccceEEEecCCCcEEEEecCCccEEEec
Confidence 899999999999999999999999999996
No 147
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.96 E-value=4.7e-29 Score=278.68 Aligned_cols=245 Identities=16% Similarity=0.164 Sum_probs=176.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++...+ .+..+++|....... .........+..++...+|||++.+......+...+
T Consensus 3 ~G~~g~Vy~~~~~~----~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~--------- 69 (277)
T cd05607 3 KGGFGEVCAVQVKN----TGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLC--------- 69 (277)
T ss_pred CCCceEEEEEEEcc----CCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEE---------
Confidence 57889999987632 244555544321111 111222334666788889999998665544333222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
.+|||+.|++|.+++...+ ..++...++.++.||+.||+|||++||+||||||+||+++.++.+|++|||++
T Consensus 70 -------lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~ 142 (277)
T cd05607 70 -------LVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLA 142 (277)
T ss_pred -------EEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceee
Confidence 3899999999999986543 35777788999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
.......
T Consensus 143 ~~~~~~~------------------------------------------------------------------------- 149 (277)
T cd05607 143 VELKDGK------------------------------------------------------------------------- 149 (277)
T ss_pred eecCCCc-------------------------------------------------------------------------
Confidence 6533100
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
......||..|+|||.+.+..++.++|||||||+||||+++ |....
T Consensus 150 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~ 198 (277)
T cd05607 150 -------------------------------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHK 198 (277)
T ss_pred -------------------------------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCc
Confidence 00123578889999999998899999999999999999986 33221
Q ss_pred ---HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH----HHHhhhhhhhhh
Q 001366 534 ---ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT----REILQSEVTNEF 588 (1092)
Q Consensus 534 ---~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa----~eiL~~~~~~~~ 588 (1092)
..............+......++++.+|+.+||.+||.+||++ .+++.|+||...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 199 EKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred chhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence 1112222222222222233567889999999999999999999 667899999764
No 148
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=6.3e-29 Score=288.42 Aligned_cols=255 Identities=15% Similarity=0.169 Sum_probs=175.0
Q ss_pred HHHhhhc--cccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.+ ++.|+||++... ..+..++.|+..... .........++..++...+|||++.++.....+....
T Consensus 23 y~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-- 96 (359)
T cd07876 23 YQQLKPIGSGAQGIVCAAFDT----VLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLE-- 96 (359)
T ss_pred eEEEEEeecCCCEEEEEEEEc----CCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcc--
Confidence 4444433 468999999762 234556665543221 2223344456677888889999998766543322111
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
.. .....+|||+++ +|.+++.. .++...+..++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus 97 ---~~-----~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl 164 (359)
T cd07876 97 ---EF-----QDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 164 (359)
T ss_pred ---cc-----ceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEE
Confidence 00 011247899876 57666643 3677789999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++.....
T Consensus 165 ~Dfg~a~~~~~~-------------------------------------------------------------------- 176 (359)
T cd07876 165 LDFGLARTACTN-------------------------------------------------------------------- 176 (359)
T ss_pred ecCCCccccccC--------------------------------------------------------------------
Confidence 999988653200
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC--
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR-- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~-- 528 (1092)
...+...||+.|+|||++.+..++.++|||||||+||||+++
T Consensus 177 ------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~ 220 (359)
T cd07876 177 ------------------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSV 220 (359)
T ss_pred ------------------------------------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCC
Confidence 001134688999999999999999999999999999999986
Q ss_pred -CCcHHHHHHHHHhc----------------------cc-cCCC--------C---------CCCCCChhHHHHHHhccc
Q 001366 529 -FDSERALAAAMSDL----------------------RD-RILP--------P---------SFLSENPKEAGFCLWQLH 567 (1092)
Q Consensus 529 -f~~~~~~~~~~~~~----------------------~~-~~~p--------~---------~~~~~~~~~~~li~~lL~ 567 (1092)
|.+......+.... .. ...+ + .....++.+.+|+.+||+
T Consensus 221 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~ 300 (359)
T cd07876 221 IFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLV 300 (359)
T ss_pred CCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhc
Confidence 43322211110000 00 0000 0 001124668899999999
Q ss_pred cCCCCCCCHHHHhhhhhhhhhhc
Q 001366 568 PEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 568 ~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
+||++|||+.|+|+||||.....
T Consensus 301 ~dP~~R~t~~e~l~hp~~~~~~~ 323 (359)
T cd07876 301 IDPDKRISVDEALRHPYITVWYD 323 (359)
T ss_pred cCcccCCCHHHHhcCchhhhhcC
Confidence 99999999999999999986443
No 149
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.96 E-value=1.4e-29 Score=288.86 Aligned_cols=246 Identities=17% Similarity=0.185 Sum_probs=178.9
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.+|.|.||++..... ...+..++.|++...... .+......+..++...+|||++.++.....+...+
T Consensus 6 ~G~~g~Vy~~~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~---------- 74 (318)
T cd05582 6 QGSFGKVFLVRKITG-PDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLY---------- 74 (318)
T ss_pred eCCCEEEEEEEEecc-CCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEE----------
Confidence 457899998654211 112455566555322211 12233445666788889999998766654333222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
++|||++|++|.+++.... .+++.+++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++.
T Consensus 75 ------lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 75 ------LILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred ------EEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence 3899999999999997654 477879999999999999999999999999999999999999999999998765
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.....
T Consensus 148 ~~~~~--------------------------------------------------------------------------- 152 (318)
T cd05582 148 SIDHE--------------------------------------------------------------------------- 152 (318)
T ss_pred cCCCC---------------------------------------------------------------------------
Confidence 32100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
......+||+.|+|||.+.+..++.++|||||||+||||+++ |......
T Consensus 153 ----------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~ 204 (318)
T cd05582 153 ----------------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK 204 (318)
T ss_pred ----------------------------CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH
Confidence 001145689999999999988899999999999999999986 4433332
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEF 588 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-----a~eiL~~~~~~~~ 588 (1092)
........... ......++.+.+|+.+||++||.+||+ ..+++.||||...
T Consensus 205 ~~~~~i~~~~~--~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 205 ETMTMILKAKL--GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred HHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 22222222221 111234788999999999999999999 6779999999753
No 150
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.96 E-value=3.2e-29 Score=286.55 Aligned_cols=243 Identities=16% Similarity=0.164 Sum_probs=170.6
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhcc-CCCCCCCccccceecCCCCCCCccCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVAS-NASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
.+|.|.||++.... .+..++.|+...... .........+...+.. ..|++++.+......+...+
T Consensus 10 ~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~-------- 77 (323)
T cd05616 10 KGSFGKVMLAERKG----TDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLY-------- 77 (323)
T ss_pred eCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEE--------
Confidence 35789999997632 234455554422111 1111222223333333 35666665444332222222
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
++|||++||+|.+++...+ .++..+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 78 --------lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~ 148 (323)
T cd05616 78 --------FVMEYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMC 148 (323)
T ss_pred --------EEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCc
Confidence 4899999999999997665 4677799999999999999999999999999999999999999999999988
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+......
T Consensus 149 ~~~~~~~------------------------------------------------------------------------- 155 (323)
T cd05616 149 KENMWDG------------------------------------------------------------------------- 155 (323)
T ss_pred eecCCCC-------------------------------------------------------------------------
Confidence 6522000
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
......+||+.|+|||++.+..++.++|||||||+||||+++ |....
T Consensus 156 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~ 205 (323)
T cd05616 156 ------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 205 (323)
T ss_pred ------------------------------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC
Confidence 001145689999999999999999999999999999999986 44433
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH-----HHHhhhhhhhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQSEVTNEF 588 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa-----~eiL~~~~~~~~ 588 (1092)
...............| ...++++.+|+.+||+++|.+|+++ .++++||||...
T Consensus 206 ~~~~~~~i~~~~~~~p--~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 206 EDELFQSIMEHNVAYP--KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred HHHHHHHHHhCCCCCC--CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 3333222222222222 2457889999999999999999984 899999999753
No 151
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.96 E-value=2.4e-27 Score=254.36 Aligned_cols=279 Identities=19% Similarity=0.312 Sum_probs=230.6
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCC--CCEEEEEECCCcEE
Q 001366 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI--KNYLASADYDGVVK 854 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~--~~~LaSgs~DgtV~ 854 (1092)
.|.+.|.+|... ++.+++|+.||.++|||... .......+|.++|.+++|...+ ...|+++|.|.+++
T Consensus 103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~G--------k~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~ 172 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLKG--------KSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLR 172 (423)
T ss_pred cchhhhhhhccc--CceEEEeecCCeeEEEecCC--------ceEEEEecCCcceeeeEEEecCCccceEEEecCCceEE
Confidence 588999998877 78999999999999999865 3345667899999999985431 34699999999999
Q ss_pred EEECCCCc----eEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCC-------------------------Cc
Q 001366 855 LWDACTGQ----TVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE-------------------------KN 905 (1092)
Q Consensus 855 IWD~~tg~----~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~-------------------------~~ 905 (1092)
+|..+.+. ++..-.||...|-+|+..+ ++..++|||.|.+|+||+..+ +.
T Consensus 173 Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~-sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~ 251 (423)
T KOG0313|consen 173 LWKWNVGENKVKALKVCRGHKRSVDSVSVDS-SGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRT 251 (423)
T ss_pred EEEecCchhhhhHHhHhcccccceeEEEecC-CCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccC
Confidence 99988764 3334459999999999999 899999999999999999321 12
Q ss_pred eeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEE
Q 001366 906 SLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLW 983 (1092)
Q Consensus 906 ~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vW 983 (1092)
++.++. |...|.+|.|++.+ .+.+++.|.+|+.||+.++.. ...+. -.....++.++ ....|++||+|..|++|
T Consensus 252 P~vtl~GHt~~Vs~V~w~d~~--v~yS~SwDHTIk~WDletg~~-~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~irl~ 327 (423)
T KOG0313|consen 252 PLVTLEGHTEPVSSVVWSDAT--VIYSVSWDHTIKVWDLETGGL-KSTLT-TNKSLNCISYSPLSKLLASGSSDRHIRLW 327 (423)
T ss_pred ceEEecccccceeeEEEcCCC--ceEeecccceEEEEEeecccc-eeeee-cCcceeEeecccccceeeecCCCCceeec
Confidence 344444 66789999999854 799999999999999998764 33333 35678999998 56789999999999999
Q ss_pred EcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCC-EEEEEecCCcEEEEeCCCCC-ceeeeeccccCCCCCccccCCC
Q 001366 984 DLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADG-YIACGSESNEVYAYHRSLPM-PITSYKFGSIDPISGKETDDDN 1061 (1092)
Q Consensus 984 Dl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~-~lasgs~Dg~I~Iwd~~~~~-~i~~~~~~~~~~i~~~~~~~~h 1061 (1092)
|-+++. .....++|.+|.+.|.++.|+|... .|++||.||++++||+.... ++..+ .+|
T Consensus 328 DPR~~~-----gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI--------------~~h 388 (423)
T KOG0313|consen 328 DPRTGD-----GSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDI--------------AGH 388 (423)
T ss_pred CCCCCC-----CceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceee--------------ccC
Confidence 999753 2455678999999999999999765 58899999999999998776 76654 467
Q ss_pred CCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1062 GLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1062 ~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
+..|.++.|. ++..+++||.|..|+|++
T Consensus 389 ~DKvl~vdW~-~~~~IvSGGaD~~l~i~~ 416 (423)
T KOG0313|consen 389 NDKVLSVDWN-EGGLIVSGGADNKLRIFK 416 (423)
T ss_pred CceEEEEecc-CCceEEeccCcceEEEec
Confidence 8999999998 667899999999999985
No 152
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.96 E-value=2.9e-29 Score=291.33 Aligned_cols=279 Identities=15% Similarity=0.094 Sum_probs=179.5
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++...+ .+..++.|+...... .........+..++...+||+++.++.....+...+
T Consensus 11 ~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~--------- 77 (360)
T cd05627 11 RGAFGEVRLVQKKD----TGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLY--------- 77 (360)
T ss_pred eCCCEEEEEEEECC----CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE---------
Confidence 35789999987632 345556655432211 111122233455677789999988766544333223
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++||||.|++|.++|...+ .++...++.++.||+.||+|||++||+||||||+||||+.++.+|++|||+++
T Consensus 78 -------lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~ 149 (360)
T cd05627 78 -------LIMEFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCT 149 (360)
T ss_pred -------EEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCc
Confidence 3899999999999997654 46777899999999999999999999999999999999999999999999987
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+.......... .. .... -.++..
T Consensus 150 ~~~~~~~~~~~~-------~~-------------------~~~~------------------------~~~~~~------ 173 (360)
T cd05627 150 GLKKAHRTEFYR-------NL-------------------THNP------------------------PSDFSF------ 173 (360)
T ss_pred cccccccccccc-------cc-------------------ccCC------------------------cccccc------
Confidence 654211100000 00 0000 000000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
+.+....................+||+.|+|||++.+..++.++|||||||+||||++| |.....
T Consensus 174 ------------~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~ 241 (360)
T cd05627 174 ------------QNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP 241 (360)
T ss_pred ------------cccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCH
Confidence 00000000000000001112256899999999999999999999999999999999986 433333
Q ss_pred HHHHHHhcc--ccCCCCCCCCCChhHHHHHHhccccCCCCCC---CHHHHhhhhhhhhh
Q 001366 535 LAAAMSDLR--DRILPPSFLSENPKEAGFCLWQLHPEPLSRP---TTREILQSEVTNEF 588 (1092)
Q Consensus 535 ~~~~~~~~~--~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp---sa~eiL~~~~~~~~ 588 (1092)
......... .....|.....++++.+|+.+|+ .+|.+|+ ++.++++||||...
T Consensus 242 ~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 242 QETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred HHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCC
Confidence 222222221 11222223345788999999987 4999998 47999999999874
No 153
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=1.5e-27 Score=241.27 Aligned_cols=244 Identities=21% Similarity=0.346 Sum_probs=213.8
Q ss_pred eeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecC
Q 001366 823 VEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN 902 (1092)
Q Consensus 823 ~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~ 902 (1092)
....+.++|..+.|+-+ +++.++|+.|.+|++|+...|.+++++.+|...|..++.+. +...|++|+.|..|.+||++
T Consensus 12 ~l~~~qgaV~avryN~d-GnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~-Dnskf~s~GgDk~v~vwDV~ 89 (307)
T KOG0316|consen 12 ILDCAQGAVRAVRYNVD-GNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSS-DNSKFASCGGDKAVQVWDVN 89 (307)
T ss_pred eecccccceEEEEEccC-CCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccc-cccccccCCCCceEEEEEcc
Confidence 44567899999999998 99999999999999999999999999999999999999998 78899999999999999999
Q ss_pred CCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCC-cceEEecCCCCCeEEEEEcCCCEEEEEECCCeE
Q 001366 903 EKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNAR-APWCVLAGHEKAVSYVKFLDSGTLVTASTDNKL 980 (1092)
Q Consensus 903 ~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~-~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I 980 (1092)
+|+.++.+. |.+.|+.++|+.+.+ .+++|+.|..+++||.|+.. .|+.++..-...|.+|... +..|++||.||++
T Consensus 90 TGkv~Rr~rgH~aqVNtV~fNeesS-Vv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~-~heIvaGS~DGtv 167 (307)
T KOG0316|consen 90 TGKVDRRFRGHLAQVNTVRFNEESS-VVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA-EHEIVAGSVDGTV 167 (307)
T ss_pred cCeeeeecccccceeeEEEecCcce-EEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec-ccEEEeeccCCcE
Confidence 999999998 678999999998875 99999999999999999754 4777887788899999985 6678999999999
Q ss_pred EEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCC
Q 001366 981 KLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDD 1060 (1092)
Q Consensus 981 ~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~ 1060 (1092)
+.||++.+ .....+. ..+|++++|++++...++++.|+++++.|..+|+.+..++ | + .
T Consensus 168 RtydiR~G--------~l~sDy~--g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYk-G-------h----k 225 (307)
T KOG0316|consen 168 RTYDIRKG--------TLSSDYF--GHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYK-G-------H----K 225 (307)
T ss_pred EEEEeecc--------eeehhhc--CCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhc-c-------c----c
Confidence 99999953 3333333 4589999999999999999999999999999999988775 1 1 1
Q ss_pred CCCCEEEEEEeCCCCEEEEEecCCeEEEEEcC
Q 001366 1061 NGLFVSSVCWRRRSDMVVAANSSGCIKVLQMV 1092 (1092)
Q Consensus 1061 h~~~V~sva~spd~~~Lasgs~DG~V~vW~lv 1092 (1092)
....-..+|++.....+++|+.||.|.+|+|+
T Consensus 226 n~eykldc~l~qsdthV~sgSEDG~Vy~wdLv 257 (307)
T KOG0316|consen 226 NMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLV 257 (307)
T ss_pred cceeeeeeeecccceeEEeccCCceEEEEEec
Confidence 12345667888888999999999999999986
No 154
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.96 E-value=4.3e-29 Score=282.28 Aligned_cols=256 Identities=15% Similarity=0.184 Sum_probs=180.4
Q ss_pred chhHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 211 FSEFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 211 f~~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
+..|.+.+.+ ++.|+||++... ..++.++.|...............++..++...+|||++.+.+....+...+
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~ 80 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSK----LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLT 80 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEc----CCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEE
Confidence 3456666555 468999999752 2234455544322222222233445677788889999998776654333222
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
++|||+. ++|.+++...+..++...++.++.||+.||+|||++||+||||||+||+++.++.+
T Consensus 81 ----------------lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~ 143 (301)
T cd07873 81 ----------------LVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGEL 143 (301)
T ss_pred ----------------EEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcE
Confidence 3799997 49999998766678888999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
|++|||+++....+.
T Consensus 144 kl~dfg~~~~~~~~~----------------------------------------------------------------- 158 (301)
T cd07873 144 KLADFGLARAKSIPT----------------------------------------------------------------- 158 (301)
T ss_pred EECcCcchhccCCCC-----------------------------------------------------------------
Confidence 999999886532100
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~ 527 (1092)
.......+++.|+|||.+.+ ..++.++|||||||++|||++
T Consensus 159 --------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t 200 (301)
T cd07873 159 --------------------------------------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMST 200 (301)
T ss_pred --------------------------------------CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHh
Confidence 00012356788999999876 457899999999999999999
Q ss_pred C---CCcHHHHHHH---HHhccc-----------------cCCCC--------CCCCCChhHHHHHHhccccCCCCCCCH
Q 001366 528 R---FDSERALAAA---MSDLRD-----------------RILPP--------SFLSENPKEAGFCLWQLHPEPLSRPTT 576 (1092)
Q Consensus 528 ~---f~~~~~~~~~---~~~~~~-----------------~~~p~--------~~~~~~~~~~~li~~lL~~dP~~Rpsa 576 (1092)
+ |......... +..+.. ...|. .....++.+.+|+.+||++||.+|||+
T Consensus 201 g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~ 280 (301)
T cd07873 201 GRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISA 280 (301)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCH
Confidence 7 4332221111 111100 00010 012346778899999999999999999
Q ss_pred HHHhhhhhhhhhhc
Q 001366 577 REILQSEVTNEFQE 590 (1092)
Q Consensus 577 ~eiL~~~~~~~~~~ 590 (1092)
.|+|+||||....+
T Consensus 281 ~eil~h~~f~~~~~ 294 (301)
T cd07873 281 EEAMKHPYFHCLGE 294 (301)
T ss_pred HHHhcCcccccccc
Confidence 99999999987643
No 155
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.96 E-value=2e-27 Score=262.57 Aligned_cols=291 Identities=15% Similarity=0.248 Sum_probs=231.1
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.+.+|+..|++++++|.|..|++||.|.+|++||+..... .-.............|.++.|++. +..|++.+.....
T Consensus 162 ~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMda--s~~~fr~l~P~E~h~i~sl~ys~T-g~~iLvvsg~aqa 238 (641)
T KOG0772|consen 162 QLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDA--SMRSFRQLQPCETHQINSLQYSVT-GDQILVVSGSAQA 238 (641)
T ss_pred eccCCceEEEEeeecCCCceeeeccccceEEEEecccccc--cchhhhccCcccccccceeeecCC-CCeEEEEecCcce
Confidence 4678999999999999999999999999999999986221 111122222234567999999998 7777777778899
Q ss_pred EEEECCCCceE------------EEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCc-eeeeEecC------C
Q 001366 854 KLWDACTGQTV------------SHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN-SLATIKNI------A 914 (1092)
Q Consensus 854 ~IWD~~tg~~i------------~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~-~l~~l~~~------~ 914 (1092)
+|+|-...+.+ ..-+||...++|.+|+|.+...|+|++.||+++|||+...+ .+..|++. -
T Consensus 239 kl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv 318 (641)
T KOG0772|consen 239 KLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRV 318 (641)
T ss_pred eEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCccc
Confidence 99996433221 22358999999999999888899999999999999997543 45555532 3
Q ss_pred ceEEEEEccCCCeEEEEEECCCeEEEEEcCCCC--cceEEecCCCC--CeEEEEEc-CCCEEEEEECCCeEEEEEcCCCC
Q 001366 915 NVCCVQFSAHSSHLLAFGSADYRTYCYDLRNAR--APWCVLAGHEK--AVSYVKFL-DSGTLVTASTDNKLKLWDLKRTS 989 (1092)
Q Consensus 915 ~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~--~~~~~l~~H~~--~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~ 989 (1092)
.+++++|+|++. +||+|+.||.|.+||.++.. ..+++-.+|.. .|+||.|+ ++++|+|-+.|++++|||++..
T Consensus 319 ~~tsC~~nrdg~-~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~- 396 (641)
T KOG0772|consen 319 PVTSCAWNRDGK-LIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQF- 396 (641)
T ss_pred CceeeecCCCcc-hhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecccc-
Confidence 589999999996 89999999999999987543 23456678887 99999999 8999999999999999999964
Q ss_pred CCCCCCCceeEEEcCCC--CCeEEEEEecCCCEEEEEec------CCcEEEEeCCCCCceeeeeccccCCCCCccccCCC
Q 001366 990 HTGPSTNACSLTFSGHT--NEKNFVGLSTADGYIACGSE------SNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDN 1061 (1092)
Q Consensus 990 ~~~~~~~~~~~~l~~h~--~~V~~v~~spdg~~lasgs~------Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h 1061 (1092)
.+++.+..+-. .+-+.++|||+.++|++|+. .+.+++||..+-..++.+.+.
T Consensus 397 ------kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~-------------- 456 (641)
T KOG0772|consen 397 ------KKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIS-------------- 456 (641)
T ss_pred ------ccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCC--------------
Confidence 34455544432 23467899999999999874 468999998888888877541
Q ss_pred CCCEEEEEEeCCCCEEEEEecCCeEEEE
Q 001366 1062 GLFVSSVCWRRRSDMVVAANSSGCIKVL 1089 (1092)
Q Consensus 1062 ~~~V~sva~spd~~~Lasgs~DG~V~vW 1089 (1092)
+..|..+.|+|.=+.|.+|+.||.++||
T Consensus 457 ~aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 457 TASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred CceEEEEeecchhhheeeecCCCceEEE
Confidence 4568999999999999999999999987
No 156
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.8e-29 Score=276.03 Aligned_cols=254 Identities=17% Similarity=0.151 Sum_probs=191.3
Q ss_pred hHHHhhhcc-c-cceeeeCCCCCccccccccccccccccccCchh-hHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTLK-G-KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~~-g-~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
-|.+-+|++ | +.||-.+.- --+++++++||.--+-.+.- ..-.+.+++.+.-..||||+.+++..-.+.-++
T Consensus 19 LYDLekTlG~GHFAVVKLArH----VFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKly- 93 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARH----VFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLY- 93 (864)
T ss_pred eehhhhhhcCCceehhhhhhh----hcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEE-
Confidence 377777776 2 455555443 22478888877643333332 234566666667779999998877644333334
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc-CCcE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ-SNQV 368 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~-~~~v 368 (1092)
++.|.-+||+|.|||-++..-+++..+..||+||+.|+.|||+..||||||||+|+.+.+ -|-|
T Consensus 94 ---------------LiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlV 158 (864)
T KOG4717|consen 94 ---------------LILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLV 158 (864)
T ss_pred ---------------EEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCce
Confidence 268888999999999777777888899999999999999999999999999999998864 5899
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
|+.|||++..+.
T Consensus 159 KLTDFGFSNkf~-------------------------------------------------------------------- 170 (864)
T KOG4717|consen 159 KLTDFGFSNKFQ-------------------------------------------------------------------- 170 (864)
T ss_pred EeeeccccccCC--------------------------------------------------------------------
Confidence 999999775533
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCC-ccccchhhhHHHHHHcC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCT-TSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t-~~sDIwSLGvll~ell~ 527 (1092)
|-..+++.||+..|-|||+|.|..|+ +++||||||||||-|+|
T Consensus 171 ------------------------------------PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVC 214 (864)
T KOG4717|consen 171 ------------------------------------PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVC 214 (864)
T ss_pred ------------------------------------CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHh
Confidence 33446688999999999999998886 68999999999999999
Q ss_pred C---CCcHHHHHHHHHhcc-ccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhccch
Q 001366 528 R---FDSERALAAAMSDLR-DRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCA 593 (1092)
Q Consensus 528 ~---f~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~~~~ 593 (1092)
| |...++-..+-.++. ....|.. .+.++++||..||..||.+|.+.+||..++|++.......
T Consensus 215 Gq~PFqeANDSETLTmImDCKYtvPsh---vS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~s 281 (864)
T KOG4717|consen 215 GQPPFQEANDSETLTMIMDCKYTVPSH---VSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGLS 281 (864)
T ss_pred CCCccccccchhhhhhhhcccccCchh---hhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCcc
Confidence 7 433333222222222 2233333 3788999999999999999999999999999987655443
No 157
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.96 E-value=3.8e-29 Score=289.72 Aligned_cols=250 Identities=17% Similarity=0.127 Sum_probs=180.9
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCC------CCCCCccccceecC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNA------SPKPVGVGTAVVSN 284 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 284 (1092)
.|.|...++ -+|.|.|+.. ..+++.+|.||.- +...-.+.+..+.++|...+ .-|++..++-..+.
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d----~~T~e~VAIKIiK--N~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr 260 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYD----HKTGEIVAIKIIK--NKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR 260 (586)
T ss_pred EEEEEEEecccccceeEEEEe----cCCCcEEEEEeec--cChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc
Confidence 576666665 3688888877 3357888887762 33444455555555555443 22444444444444
Q ss_pred CCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc
Q 001366 285 GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL 363 (1092)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~-~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~ 363 (1092)
.-++ +..++-+.+|.++|+.... .++...++.|..|||.||.+||..||||+||||+||||.
T Consensus 261 ~Hlc-----------------iVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~ 323 (586)
T KOG0667|consen 261 NHLC-----------------IVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLK 323 (586)
T ss_pred ccee-----------------eeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeec
Confidence 4444 5777789999999987643 477888999999999999999999999999999999998
Q ss_pred cC--CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 364 QS--NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 364 ~~--~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
.. ..|||||||.+.....
T Consensus 324 ~~~r~~vKVIDFGSSc~~~q------------------------------------------------------------ 343 (586)
T KOG0667|consen 324 DPKRSRIKVIDFGSSCFESQ------------------------------------------------------------ 343 (586)
T ss_pred cCCcCceeEEecccccccCC------------------------------------------------------------
Confidence 54 4699999998865330
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHH
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVL 521 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvl 521 (1092)
.+...+.++.|+|||+|.|.+|+.+.||||||||
T Consensus 344 ----------------------------------------------~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCI 377 (586)
T KOG0667|consen 344 ----------------------------------------------RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCI 377 (586)
T ss_pred ----------------------------------------------cceeeeeccccccchhhccCCCCCccceeehhhh
Confidence 1115678899999999999999999999999999
Q ss_pred HHHHcCC---CCcHHHHHHHHHhccccC----------------------------------------------------
Q 001366 522 FFELFGR---FDSERALAAAMSDLRDRI---------------------------------------------------- 546 (1092)
Q Consensus 522 l~ell~~---f~~~~~~~~~~~~~~~~~---------------------------------------------------- 546 (1092)
++||++| |+++.+..++.....-.-
T Consensus 378 lAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 457 (586)
T KOG0667|consen 378 LAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLER 457 (586)
T ss_pred HHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccc
Confidence 9999997 676655444422211100
Q ss_pred -CCCC-------CC-CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhcc
Q 001366 547 -LPPS-------FL-SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1092)
Q Consensus 547 -~p~~-------~~-~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~~ 591 (1092)
.|+. +. .....+.+|+++||.+||..|+|+.++|+||||......
T Consensus 458 ~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~~~ 511 (586)
T KOG0667|consen 458 RGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTSLE 511 (586)
T ss_pred cCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccccccc
Confidence 1101 11 122346899999999999999999999999999865443
No 158
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=8.2e-29 Score=287.98 Aligned_cols=257 Identities=15% Similarity=0.156 Sum_probs=176.3
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccc-cCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTT-TMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+.+.+ +|.|+||++.... .+..++.|+.... ..........++..++...+|||++.++..........
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~- 99 (364)
T cd07875 25 RYQNLKPIGSGAQGIVCAAYDAI----LERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE- 99 (364)
T ss_pred ceeEEEEeecCCCeEEEEEEECC----CCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccc-
Confidence 34444444 4789999997522 2444555544322 12223344556677788889999998665433211110
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
.. .....+|||+++ +|.+++.. .++...+..++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 100 ----~~-----~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~k 166 (364)
T cd07875 100 ----EF-----QDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166 (364)
T ss_pred ----cc-----CeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEE
Confidence 00 001247999875 78887754 366778899999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
++|||+++.....
T Consensus 167 L~DfG~a~~~~~~------------------------------------------------------------------- 179 (364)
T cd07875 167 ILDFGLARTAGTS------------------------------------------------------------------- 179 (364)
T ss_pred EEeCCCccccCCC-------------------------------------------------------------------
Confidence 9999988653210
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC-
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~- 528 (1092)
...+...||+.|+|||++.+..++.++|||||||+||||+++
T Consensus 180 -------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~ 222 (364)
T cd07875 180 -------------------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222 (364)
T ss_pred -------------------------------------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCC
Confidence 001134688999999999999999999999999999999986
Q ss_pred --CCcHHHHHHHHHhccccCC--------------------C--------------------CCCCCCChhHHHHHHhcc
Q 001366 529 --FDSERALAAAMSDLRDRIL--------------------P--------------------PSFLSENPKEAGFCLWQL 566 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~--------------------p--------------------~~~~~~~~~~~~li~~lL 566 (1092)
|.+..........+..... | .........+.+|+.+||
T Consensus 223 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL 302 (364)
T cd07875 223 VLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 302 (364)
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhc
Confidence 5443322222111110000 0 001112356789999999
Q ss_pred ccCCCCCCCHHHHhhhhhhhhhhcc
Q 001366 567 HPEPLSRPTTREILQSEVTNEFQEV 591 (1092)
Q Consensus 567 ~~dP~~Rpsa~eiL~~~~~~~~~~~ 591 (1092)
+.||.+|||+.++|+||||....++
T Consensus 303 ~~dP~~R~t~~e~L~hp~~~~~~~~ 327 (364)
T cd07875 303 VIDASKRISVDEALQHPYINVWYDP 327 (364)
T ss_pred CcCcccCCCHHHHhcCcccccccCc
Confidence 9999999999999999999864443
No 159
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.96 E-value=3.8e-26 Score=250.03 Aligned_cols=282 Identities=24% Similarity=0.341 Sum_probs=231.1
Q ss_pred hhhccchhhhhhccccccCCCC--cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCc
Q 001366 725 LLRDRENLFLAQQDQEIQNPTD--RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKK 802 (1092)
Q Consensus 725 ~l~~~~~~~~~~~~~~~~~~~~--~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~ 802 (1092)
.+++|.+.+..... +++. .+.+..|+.+.+|++....... .+..|...+.++.|+|++++|++++.|+.
T Consensus 4 ~~~~h~~~i~~~~~----~~~~~~l~~~~~~g~i~i~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 74 (289)
T cd00200 4 TLKGHTGGVTCVAF----SPDGKLLATGSGDGTIKVWDLETGELLR-----TLKGHTGPVRDVAASADGTYLASGSSDKT 74 (289)
T ss_pred HhcccCCCEEEEEE----cCCCCEEEEeecCcEEEEEEeeCCCcEE-----EEecCCcceeEEEECCCCCEEEEEcCCCe
Confidence 34556655554433 4432 3455679999999987554222 34578889999999999999999999999
Q ss_pred EEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecC
Q 001366 803 IKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQV 882 (1092)
Q Consensus 803 I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~ 882 (1092)
|++|++... ........|...|.+++|+++ +.++++++.||.|++||+.+++....+..|...|.+++|+|
T Consensus 75 i~i~~~~~~-------~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 145 (289)
T cd00200 75 IRLWDLETG-------ECVRTLTGHTSYVSSVAFSPD-GRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSP- 145 (289)
T ss_pred EEEEEcCcc-------cceEEEeccCCcEEEEEEcCC-CCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcC-
Confidence 999998752 122233467789999999997 78888888899999999998998889989999999999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCCceeeeEec-CCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeE
Q 001366 883 HPTKLASGSDDCSVKLWNINEKNSLATIKN-IANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVS 961 (1092)
Q Consensus 883 ~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~-~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~ 961 (1092)
++.++++++.|+.|++||+++++.+..+.. ...+.++.|+|++. .+++++.|+.|++||++..+ .+..+..|...+.
T Consensus 146 ~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~i~d~~~~~-~~~~~~~~~~~i~ 223 (289)
T cd00200 146 DGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGE-KLLSSSSDGTIKLWDLSTGK-CLGTLRGHENGVN 223 (289)
T ss_pred cCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcC-EEEEecCCCcEEEEECCCCc-eecchhhcCCceE
Confidence 678888888899999999998888888874 55899999999985 77778889999999998754 3556668899999
Q ss_pred EEEEcC-CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEe
Q 001366 962 YVKFLD-SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYH 1034 (1092)
Q Consensus 962 ~v~fs~-~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd 1034 (1092)
++.|++ +.++++++.|+.|++||+.+ ......+..|...+.+++|+|++.+|++++.|+.|++|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~i~i~~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 224 SVAFSPDGYLLASGSEDGTIRVWDLRT--------GECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EEEEcCCCcEEEEEcCCCcEEEEEcCC--------ceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 999995 55666666799999999983 456677778999999999999999999999999999995
No 160
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.96 E-value=5.1e-27 Score=279.59 Aligned_cols=266 Identities=21% Similarity=0.336 Sum_probs=225.7
Q ss_pred EeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCC
Q 001366 749 GAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR 828 (1092)
Q Consensus 749 ~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~ 828 (1092)
.+..|+++++|....... ..+ ..+.+|...|++++|+|++.++++|+.|++|+|||+.. .........+|.
T Consensus 176 ~~~~~~~i~~~~~~~~~~-~~~--~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~------~~~~~~~l~gH~ 246 (456)
T KOG0266|consen 176 AASSDGLIRIWKLEGIKS-NLL--RELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKD------DGRNLKTLKGHS 246 (456)
T ss_pred EccCCCcEEEeecccccc-hhh--ccccccccceeeeEECCCCcEEEEecCCceEEEeeccC------CCeEEEEecCCC
Confidence 556889999999754442 112 23578999999999999999999999999999999832 123445667999
Q ss_pred CCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCc--e
Q 001366 829 SKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN--S 906 (1092)
Q Consensus 829 ~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~--~ 906 (1092)
..|++++|+|. ++++++|+.|++|+|||+.+++++..+.+|...|++++|++ ++..|++++.|+.|+|||+.++. +
T Consensus 247 ~~v~~~~f~p~-g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~-d~~~l~s~s~d~~i~vwd~~~~~~~~ 324 (456)
T KOG0266|consen 247 TYVTSVAFSPD-GNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSP-DGNLLVSASYDGTIRVWDLETGSKLC 324 (456)
T ss_pred CceEEEEecCC-CCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECC-CCCEEEEcCCCccEEEEECCCCceee
Confidence 99999999999 69999999999999999999999999999999999999999 99999999999999999999998 5
Q ss_pred eeeEec-C-C-ceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEE---Ec-CCCEEEEEECCCe
Q 001366 907 LATIKN-I-A-NVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVK---FL-DSGTLVTASTDNK 979 (1092)
Q Consensus 907 l~~l~~-~-~-~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~---fs-~~~~L~Sgs~Dg~ 979 (1092)
+..+.. . . .+++++|+|++. ++++++.|+.+++||++.... ...+.+|...+.++. ++ .+.++++|+.|+.
T Consensus 325 ~~~~~~~~~~~~~~~~~fsp~~~-~ll~~~~d~~~~~w~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~ 402 (456)
T KOG0266|consen 325 LKLLSGAENSAPVTSVQFSPNGK-YLLSASLDRTLKLWDLRSGKS-VGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGS 402 (456)
T ss_pred eecccCCCCCCceeEEEECCCCc-EEEEecCCCeEEEEEccCCcc-eeeecccCCcceeEecccccCCCCeEEEEeCCce
Confidence 566652 2 2 689999999996 899999999999999998764 466777877544432 22 6778999999999
Q ss_pred EEEEEcCCCCCCCCCCCceeEEEcCC-CCCeEEEEEecCCCEEEEEe--cCCcEEEEeC
Q 001366 980 LKLWDLKRTSHTGPSTNACSLTFSGH-TNEKNFVGLSTADGYIACGS--ESNEVYAYHR 1035 (1092)
Q Consensus 980 I~vWDl~~~~~~~~~~~~~~~~l~~h-~~~V~~v~~spdg~~lasgs--~Dg~I~Iwd~ 1035 (1092)
|.+||+.+ ...+..+.+| ...+..+.++|...++++++ .|+.|++|..
T Consensus 403 v~~~~~~s--------~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~ 453 (456)
T KOG0266|consen 403 VYVWDSSS--------GGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKY 453 (456)
T ss_pred EEEEeCCc--------cchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecC
Confidence 99999983 4567788899 88899999999999999998 7899999954
No 161
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.96 E-value=8.7e-29 Score=286.75 Aligned_cols=256 Identities=15% Similarity=0.177 Sum_probs=175.5
Q ss_pred hHHHhhhc--cccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+.+.+ +|.|+||++... ..+..++.|+..... .........++..++...+|||++.++..........
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~- 92 (355)
T cd07874 18 RYQNLKPIGSGAQGIVCAAYDA----VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLE- 92 (355)
T ss_pred ceeEEEEeeecCCEEEEEEEec----CCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccc-
Confidence 34444433 478999998763 224455555443221 2223344556677788889999998766543222111
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
.. .....+|||+++ +|.+++.. .++...+..++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 93 ----~~-----~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~k 159 (355)
T cd07874 93 ----EF-----QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 159 (355)
T ss_pred ----cc-----ceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEE
Confidence 00 111247999976 67777754 367778899999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
++|||+++.....
T Consensus 160 l~Dfg~~~~~~~~------------------------------------------------------------------- 172 (355)
T cd07874 160 ILDFGLARTAGTS------------------------------------------------------------------- 172 (355)
T ss_pred EeeCcccccCCCc-------------------------------------------------------------------
Confidence 9999988653310
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC-
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~- 528 (1092)
.......||+.|+|||++.+..++.++|||||||+||||+++
T Consensus 173 -------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 215 (355)
T cd07874 173 -------------------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215 (355)
T ss_pred -------------------------------------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 001134688999999999998999999999999999999985
Q ss_pred --CCcHHHHHHHHHhcc----------------------cc------CCCCC------------CCCCChhHHHHHHhcc
Q 001366 529 --FDSERALAAAMSDLR----------------------DR------ILPPS------------FLSENPKEAGFCLWQL 566 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~----------------------~~------~~p~~------------~~~~~~~~~~li~~lL 566 (1092)
|.+..........+. .. .+|.. .......+.+|+.+||
T Consensus 216 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL 295 (355)
T cd07874 216 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 295 (355)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHh
Confidence 443322111110000 00 00100 0112356789999999
Q ss_pred ccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 567 HPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 567 ~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
.+||++|||+.|+|+||||....+
T Consensus 296 ~~dP~~Rps~~ell~hp~~~~~~~ 319 (355)
T cd07874 296 VIDPAKRISVDEALQHPYINVWYD 319 (355)
T ss_pred cCCchhcCCHHHHhcCcchhcccC
Confidence 999999999999999999985533
No 162
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.96 E-value=3.9e-29 Score=286.36 Aligned_cols=245 Identities=16% Similarity=0.118 Sum_probs=172.7
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
..++.|.||++...+ .+..++.|+....... ........+..++... .||+++.+..........+
T Consensus 4 G~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~------- 72 (327)
T cd05617 4 GRGSYAKVLLVRLKK----NDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLF------- 72 (327)
T ss_pred eeCCCeEEEEEEECC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEE-------
Confidence 346789999987632 2344555554322111 1112223344444444 6899887665544333222
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
++|||++|++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus 73 ---------lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~ 142 (327)
T cd05617 73 ---------LVIEYVNGGDLMFHMQRQR-KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGM 142 (327)
T ss_pred ---------EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEecccc
Confidence 3899999999999997654 477779999999999999999999999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++......
T Consensus 143 ~~~~~~~~------------------------------------------------------------------------ 150 (327)
T cd05617 143 CKEGLGPG------------------------------------------------------------------------ 150 (327)
T ss_pred ceeccCCC------------------------------------------------------------------------
Confidence 76422000
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcH---
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSE--- 532 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~--- 532 (1092)
......+||+.|+|||.+.+..++.++|||||||+||||++|..+.
T Consensus 151 -------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~ 199 (327)
T cd05617 151 -------------------------------DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDII 199 (327)
T ss_pred -------------------------------CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCcc
Confidence 0011457899999999999999999999999999999999862221
Q ss_pred ------HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC------HHHHhhhhhhhhh
Q 001366 533 ------RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT------TREILQSEVTNEF 588 (1092)
Q Consensus 533 ------~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps------a~eiL~~~~~~~~ 588 (1092)
.........+..... +.....++.+.+++.+||.+||.+|++ +.+++.||||...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 200 TDNPDMNTEDYLFQVILEKPI-RIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred CCCcccccHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 111112222222111 112234688899999999999999998 4699999999764
No 163
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.96 E-value=1.9e-28 Score=270.15 Aligned_cols=250 Identities=17% Similarity=0.302 Sum_probs=213.9
Q ss_pred eeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCC-CceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEe
Q 001366 822 AVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACT-GQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900 (1092)
Q Consensus 822 ~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~t-g~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWD 900 (1092)
....+|+..|+++.|.|-.+.+|+|++.|+.|+||++.. +.++++|.+|..+|.+++|+. ++..|+|+|.|+.|++||
T Consensus 208 ~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~-~g~~fLS~sfD~~lKlwD 286 (503)
T KOG0282|consen 208 HNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNN-CGTSFLSASFDRFLKLWD 286 (503)
T ss_pred eeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccc-cCCeeeeeecceeeeeec
Confidence 344579999999999996689999999999999999877 789999999999999999999 999999999999999999
Q ss_pred cCCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCe
Q 001366 901 INEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNK 979 (1092)
Q Consensus 901 l~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~ 979 (1092)
+++|+++..+.....++|+.|+|++.+.|++|+.|+.|+.||+|+++ .+..+..|-+.|..+.|- .+..+++++.|++
T Consensus 287 tETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~k-vvqeYd~hLg~i~~i~F~~~g~rFissSDdks 365 (503)
T KOG0282|consen 287 TETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGK-VVQEYDRHLGAILDITFVDEGRRFISSSDDKS 365 (503)
T ss_pred cccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchH-HHHHHHhhhhheeeeEEccCCceEeeeccCcc
Confidence 99999999999999999999999998899999999999999999987 456677899999999998 7779999999999
Q ss_pred EEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccC
Q 001366 980 LKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDD 1059 (1092)
Q Consensus 980 I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~ 1059 (1092)
++||+.+..... +.+ ...+.....++..+|+++++++=+.|+.|.||.+...-++. ......
T Consensus 366 ~riWe~~~~v~i-----k~i--~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~n-----------kkK~fe 427 (503)
T KOG0282|consen 366 VRIWENRIPVPI-----KNI--ADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLN-----------KKKRFE 427 (503)
T ss_pred EEEEEcCCCccc-----hhh--cchhhccCcceecCCCCCeehhhccCceEEEEecccccccC-----------Hhhhhc
Confidence 999999843211 111 22233345689999999999999999999999865433222 223445
Q ss_pred CCC--CCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1060 DNG--LFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1060 ~h~--~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
+|. +.-..|.|||||.+|++|++||.+.+|+.
T Consensus 428 Gh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdw 461 (503)
T KOG0282|consen 428 GHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDW 461 (503)
T ss_pred ceeccCceeeEEEcCCCCeEEeecCCccEEEeec
Confidence 554 45678899999999999999999999984
No 164
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.96 E-value=1.5e-28 Score=280.02 Aligned_cols=244 Identities=15% Similarity=0.047 Sum_probs=172.7
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|.||+|...+.-......++.|+...............+...+....|||++.++.....+.
T Consensus 17 ~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~-------------- 82 (316)
T cd05108 17 SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-------------- 82 (316)
T ss_pred cCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCC--------------
Confidence 347899999975321111122244444432222222233445566788889999998665433211
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
...+++|+.+|+|.+++......++...++.++.||+.||+|||++||+||||||+|||++.++.+|++|||+++.+
T Consensus 83 ---~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 83 ---VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred ---ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccc
Confidence 12379999999999999877666888889999999999999999999999999999999999999999999998764
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
......
T Consensus 160 ~~~~~~-------------------------------------------------------------------------- 165 (316)
T cd05108 160 GADEKE-------------------------------------------------------------------------- 165 (316)
T ss_pred cCCCcc--------------------------------------------------------------------------
Confidence 410000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~ 535 (1092)
.......++..|+|||.+.+..++.++|||||||+||||++ + |.... .
T Consensus 166 ---------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~-~ 217 (316)
T cd05108 166 ---------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-A 217 (316)
T ss_pred ---------------------------eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC-H
Confidence 00001223556999999999999999999999999999986 4 32221 1
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
......+.....++.....+..+..++.+||..+|.+||++.+++.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 218 SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 22222333333334444567889999999999999999999999986
No 165
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.96 E-value=9.7e-29 Score=288.01 Aligned_cols=252 Identities=17% Similarity=0.113 Sum_probs=178.0
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
+|.+.+.+ +|.|.||++.... .+..++.|+...... .........+..++...+|||++.++.....+...+
T Consensus 44 ~y~i~~~lG~G~fg~Vy~~~~~~----~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (371)
T cd05622 44 DYEVVKVIGRGAFGEVQLVRHKS----TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY 119 (371)
T ss_pred hcEEEEEEeecCCeEEEEEEECC----CCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence 34444444 3679999887632 344455554321111 111222345566778889999998776654333333
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
++||||+|++|.++++.. .++...++.++.||+.||+|||++||+||||||+|||++.++.+
T Consensus 120 ----------------lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~i 181 (371)
T cd05622 120 ----------------MVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL 181 (371)
T ss_pred ----------------EEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCE
Confidence 389999999999999764 46777899999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++.+.....
T Consensus 182 kL~DfG~a~~~~~~~~---------------------------------------------------------------- 197 (371)
T cd05622 182 KLADFGTCMKMNKEGM---------------------------------------------------------------- 197 (371)
T ss_pred EEEeCCceeEcCcCCc----------------------------------------------------------------
Confidence 9999999876431000
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC----CCCccccchhhhHHHHH
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG----VCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~----~~t~~sDIwSLGvll~e 524 (1092)
......+||+.|+|||++.+. .++.++|||||||+|||
T Consensus 198 --------------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilye 239 (371)
T cd05622 198 --------------------------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE 239 (371)
T ss_pred --------------------------------------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHH
Confidence 000145799999999999763 37899999999999999
Q ss_pred HcCC---CCcHHHHHHHHHhccc--cCCCCCCCCCChhHHHHHHhccccCCCC--CCCHHHHhhhhhhhhh
Q 001366 525 LFGR---FDSERALAAAMSDLRD--RILPPSFLSENPKEAGFCLWQLHPEPLS--RPTTREILQSEVTNEF 588 (1092)
Q Consensus 525 ll~~---f~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~li~~lL~~dP~~--Rpsa~eiL~~~~~~~~ 588 (1092)
|++| |............... ....|.....++.+.+|+.+||..+|.+ |+++.+|++|+||...
T Consensus 240 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 240 MLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 9986 4443332222222222 1222344456888999999999844433 7899999999999763
No 166
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.96 E-value=1.9e-28 Score=273.98 Aligned_cols=253 Identities=18% Similarity=0.148 Sum_probs=178.3
Q ss_pred hhHHHhhhc--cccceeeeCCCCCcc-ccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 212 SEFFVKTTL--KGKGIVCRGPPLNAF-KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 212 ~~~~~~~~~--~g~Gvv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
..|.+...+ +|.|.||+|...... ......++.|.............-.++...+....|||++.+..........+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 345555555 468999998753311 11123344444322211222233345566778889999998665433222222
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCcccc
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRIECLYIFRQIVALVDYHHTQGVTFL 353 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHr 353 (1092)
.+|||++|++|.++|.... ..++..+++.++.||+.||.|||++||+||
T Consensus 85 ----------------~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~ 148 (283)
T cd05048 85 ----------------MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHR 148 (283)
T ss_pred ----------------EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 3799999999999997542 346777899999999999999999999999
Q ss_pred CCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCc
Q 001366 354 DLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSK 433 (1092)
Q Consensus 354 DLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (1092)
||||+||+++.++.+|++|||+++........
T Consensus 149 dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~------------------------------------------------ 180 (283)
T cd05048 149 DLAARNCLVGEGLTVKISDFGLSRDIYSADYY------------------------------------------------ 180 (283)
T ss_pred ccccceEEEcCCCcEEECCCcceeeccccccc------------------------------------------------
Confidence 99999999999999999999998754310000
Q ss_pred cCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccc
Q 001366 434 YGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSS 513 (1092)
Q Consensus 434 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~s 513 (1092)
.......+++.|+|||.+.+..++.++
T Consensus 181 -----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~s 207 (283)
T cd05048 181 -----------------------------------------------------RVQSKSLLPVRWMPPEAILYGKFTTES 207 (283)
T ss_pred -----------------------------------------------------cccCCCcccccccCHHHhccCcCchhh
Confidence 000133567789999999988999999
Q ss_pred cchhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 514 NIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 514 DIwSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|||||||+||||++ + |..... ...+..+.....++.....++++.+|+.+||..+|.+||++.+|+++
T Consensus 208 Dv~slG~il~el~~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 208 DIWSFGVVLWEIFSYGLQPYYGFSN-QEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred hHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999996 4 433222 22333344444444445667899999999999999999999999875
No 167
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.95 E-value=2.5e-28 Score=271.27 Aligned_cols=246 Identities=15% Similarity=0.098 Sum_probs=170.9
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
++.|.||+|...+ .+..++.|++.... .. ......+..++... .|||++............. ....
T Consensus 17 g~~g~vy~~~~~~----~~~~~aik~~~~~~-~~-~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~---~~~~---- 83 (272)
T cd06637 17 GTYGQVYKGRHVK----TGQLAAIKVMDVTG-DE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG---MDDQ---- 83 (272)
T ss_pred cCCeEEEEEEEcC----CCcEEEEEEEEcCC-cc-HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC---CCcE----
Confidence 4689999997632 24445555543221 11 12223333444444 7999998766543221110 0001
Q ss_pred ccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
...+|||+.+++|.+++... +..+++..++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++.
T Consensus 84 ---~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 84 ---LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred ---EEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 11489999999999999763 35678888999999999999999999999999999999999999999999998865
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.....
T Consensus 161 ~~~~~--------------------------------------------------------------------------- 165 (272)
T cd06637 161 LDRTV--------------------------------------------------------------------------- 165 (272)
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 33100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-----CCCCccccchhhhHHHHHHcCCCCcH-
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----GVCTTSSNIYSLGVLFFELFGRFDSE- 532 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----~~~t~~sDIwSLGvll~ell~~f~~~- 532 (1092)
.......|+..|+|||++.+ ..++.++|||||||++|||+++..+.
T Consensus 166 ----------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~ 217 (272)
T cd06637 166 ----------------------------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC 217 (272)
T ss_pred ----------------------------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 00013568889999999863 45889999999999999999873322
Q ss_pred --HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 533 --RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 533 --~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
......................+..+.+|+.+||..+|.+|||+.+++.||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 218 DMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred ccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 22222222222211112223456789999999999999999999999999997
No 168
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.95 E-value=1.4e-28 Score=287.03 Aligned_cols=250 Identities=15% Similarity=0.146 Sum_probs=175.3
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.+|.|+||++... ..+..++.|........ .......++..++...+|||++.+++........
T Consensus 10 ~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~----------- 74 (372)
T cd07853 10 YGAFGVVWSVTDP----RDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHID----------- 74 (372)
T ss_pred eCCCEEEEEEEEC----CCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCcc-----------
Confidence 4578999999852 22455565544322111 2234456677788889999999876654422210
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
++....++|+|+. ++|.+++...+ .++..+++.+++||+.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 75 ~~~~~~lv~e~~~-~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 75 PFEEIYVVTELMQ-SDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred ccceEEEEeeccc-cCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceee
Confidence 0111224788876 58998886554 577779999999999999999999999999999999999999999999998865
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.....
T Consensus 153 ~~~~~--------------------------------------------------------------------------- 157 (372)
T cd07853 153 EEPDE--------------------------------------------------------------------------- 157 (372)
T ss_pred cccCc---------------------------------------------------------------------------
Confidence 32100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
....+..++|++|+|||.+.+. .++.++|||||||++|||+++ |.....
T Consensus 158 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 210 (372)
T cd07853 158 ---------------------------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSP 210 (372)
T ss_pred ---------------------------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCH
Confidence 0011134678999999999874 479999999999999999986 433322
Q ss_pred HHHHHH----------------------hc-cccCCCC-------CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001366 535 LAAAMS----------------------DL-RDRILPP-------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1092)
Q Consensus 535 ~~~~~~----------------------~~-~~~~~p~-------~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~ 584 (1092)
...... .+ .....++ .....++++.+|+.+||++||.+|||+.|+|+|||
T Consensus 211 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 290 (372)
T cd07853 211 IQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290 (372)
T ss_pred HHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHh
Confidence 111110 00 1111111 11234678899999999999999999999999999
Q ss_pred hhhh
Q 001366 585 TNEF 588 (1092)
Q Consensus 585 ~~~~ 588 (1092)
|.+.
T Consensus 291 ~~~~ 294 (372)
T cd07853 291 LDEG 294 (372)
T ss_pred hCCC
Confidence 9875
No 169
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.95 E-value=1.5e-28 Score=282.01 Aligned_cols=247 Identities=15% Similarity=0.110 Sum_probs=175.8
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.++.|+||++.... .+..++.|+...... ......-..+..++...+||+++.+......+...+
T Consensus 11 ~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~--------- 77 (331)
T cd05597 11 RGAFGEVAVVKMKN----TGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLY--------- 77 (331)
T ss_pred ecCCeEEEEEEECC----CCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEE---------
Confidence 35789999987632 244556655421111 111122233445566778999998766544333333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
.+|||+.|++|.++|...+..+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus 78 -------lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 150 (331)
T cd05597 78 -------LVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCL 150 (331)
T ss_pred -------EEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCcee
Confidence 3899999999999998766678888999999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+.....
T Consensus 151 ~~~~~~~------------------------------------------------------------------------- 157 (331)
T cd05597 151 RLLADGT------------------------------------------------------------------------- 157 (331)
T ss_pred ecCCCCC-------------------------------------------------------------------------
Confidence 5431000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-----CCCCccccchhhhHHHHHHcCC---C
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----GVCTTSSNIYSLGVLFFELFGR---F 529 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----~~~t~~sDIwSLGvll~ell~~---f 529 (1092)
......+||+.|+|||++.+ ..++.++|||||||+||||++| |
T Consensus 158 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf 208 (331)
T cd05597 158 -----------------------------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPF 208 (331)
T ss_pred -----------------------------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCC
Confidence 00012468999999999873 4578899999999999999986 4
Q ss_pred CcHHHHHHHHHhc---cccCCCCCCCCCChhHHHHHHhccccCCCC--CCCHHHHhhhhhhhhh
Q 001366 530 DSERALAAAMSDL---RDRILPPSFLSENPKEAGFCLWQLHPEPLS--RPTTREILQSEVTNEF 588 (1092)
Q Consensus 530 ~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~li~~lL~~dP~~--Rpsa~eiL~~~~~~~~ 588 (1092)
............. ....+|+.....++.+.+|+.+||+.++.. |+++.++++||||...
T Consensus 209 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 209 YAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred CCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 3332222222222 122345555557888999999998764443 7899999999999763
No 170
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.95 E-value=2.1e-28 Score=272.42 Aligned_cols=248 Identities=15% Similarity=0.191 Sum_probs=182.7
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||+|...+ .+..++.|+...............+...++..+|||++........+...+
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~--- 75 (274)
T cd06609 3 FTLLECIGKGSFGEVYKAIDKR----TNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLW--- 75 (274)
T ss_pred hhhhhhhcCCCCeEEEEEEECC----CCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEE---
Confidence 4444444 5789999998632 345566666543322222233345566778888999988665544332222
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
+++||+.|++|.+++... .++...++.++.||+.||.|||++||+||||+|+||+++.++.++++
T Consensus 76 -------------~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~ 140 (274)
T cd06609 76 -------------IIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLA 140 (274)
T ss_pred -------------EEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEc
Confidence 379999999999999765 67788999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++.+....
T Consensus 141 d~g~~~~~~~~~-------------------------------------------------------------------- 152 (274)
T cd06609 141 DFGVSGQLTSTM-------------------------------------------------------------------- 152 (274)
T ss_pred ccccceeecccc--------------------------------------------------------------------
Confidence 999987754100
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR--- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~--- 528 (1092)
.......|++.|+|||.+.+..++.++|||||||++|||+++
T Consensus 153 -----------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p 197 (274)
T cd06609 153 -----------------------------------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPP 197 (274)
T ss_pred -----------------------------------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 000134578889999999998899999999999999999997
Q ss_pred CCcHHHHHHHHHhccccCCCCCCC-C-CChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 529 FDSERALAAAMSDLRDRILPPSFL-S-ENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 529 f~~~~~~~~~~~~~~~~~~p~~~~-~-~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|.......... .+.... ++... . .++.+.+++.+||+.+|++||+++++++||||...
T Consensus 198 ~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~ 257 (274)
T cd06609 198 LSDLHPMRVLF-LIPKNN-PPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKA 257 (274)
T ss_pred cccCchHHHHH-HhhhcC-CCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCC
Confidence 33222222221 122222 22222 2 46789999999999999999999999999999764
No 171
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.95 E-value=1.3e-28 Score=281.58 Aligned_cols=244 Identities=17% Similarity=0.171 Sum_probs=171.3
Q ss_pred hccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCC-CCCCCccccceecCCCCCCCccCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNA-SPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
..++.|.||++... ..+..++.|+...... .........+..++.... +++++.+......+...+
T Consensus 9 g~G~~g~Vy~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~------- 77 (323)
T cd05615 9 GKGSFGKVMLAERK----GTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLY------- 77 (323)
T ss_pred EecCCeEEEEEEEC----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEE-------
Confidence 34578999998763 2345566665432111 112222333344444444 455554444333222222
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
.+|||++|++|.+++...+ .+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus 78 ---------lv~Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~ 147 (323)
T cd05615 78 ---------FVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGM 147 (323)
T ss_pred ---------EEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEecccc
Confidence 3899999999999997665 477779999999999999999999999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++......
T Consensus 148 ~~~~~~~~------------------------------------------------------------------------ 155 (323)
T cd05615 148 CKEHMVDG------------------------------------------------------------------------ 155 (323)
T ss_pred ccccCCCC------------------------------------------------------------------------
Confidence 86532000
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcH
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
.......||+.|+|||++.+..++.++|||||||+||||+++ |...
T Consensus 156 -------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~ 204 (323)
T cd05615 156 -------------------------------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE 204 (323)
T ss_pred -------------------------------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCC
Confidence 000134689999999999998999999999999999999986 4433
Q ss_pred HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhh
Q 001366 533 RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEF 588 (1092)
Q Consensus 533 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-----a~eiL~~~~~~~~ 588 (1092)
................| ...++.+.+|+.+||+++|.+|++ ..++++||||...
T Consensus 205 ~~~~~~~~i~~~~~~~p--~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 205 DEDELFQSIMEHNVSYP--KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred CHHHHHHHHHhCCCCCC--ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 33222222222222111 234788899999999999999997 4799999999763
No 172
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=1.5e-28 Score=288.72 Aligned_cols=249 Identities=13% Similarity=0.092 Sum_probs=172.6
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ ++.|.||++...+. ..+..++.|+.... ....++..++...+|||++.++.....+...+
T Consensus 94 y~i~~~Lg~G~~g~Vy~~~~~~~--~~~~~v~vK~~~~~------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~--- 162 (392)
T PHA03207 94 YNILSSLTPGSEGEVFVCTKHGD--EQRKKVIVKAVTGG------KTPGREIDILKTISHRAIINLIHAYRWKSTVC--- 162 (392)
T ss_pred eEEEEeecCCCCeEEEEEEEcCC--ccceeEEEEecccc------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEE---
Confidence 5554444 46799998864321 11233344333221 12234666778889999998776544333222
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
.+|+++. ++|.+++... ..++..+++.|+.||+.||+|||++||+||||||+|||++..+.+||+
T Consensus 163 -------------lv~e~~~-~~l~~~l~~~-~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~ 227 (392)
T PHA03207 163 -------------MVMPKYK-CDLFTYVDRS-GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLG 227 (392)
T ss_pred -------------EEehhcC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEc
Confidence 2677775 6899999544 457888999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++.+.....
T Consensus 228 DfG~a~~~~~~~~------------------------------------------------------------------- 240 (392)
T PHA03207 228 DFGAACKLDAHPD------------------------------------------------------------------- 240 (392)
T ss_pred cCccccccCcccc-------------------------------------------------------------------
Confidence 9999876431000
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR--- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~--- 528 (1092)
........||+.|+|||++.+..++.++|||||||+||||+++
T Consensus 241 ----------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~p 286 (392)
T PHA03207 241 ----------------------------------TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVT 286 (392)
T ss_pred ----------------------------------cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 0001145789999999999999999999999999999999975
Q ss_pred CCcH------HHHHHHHHhcc----------------------ccCC----CCCC---CCCChhHHHHHHhccccCCCCC
Q 001366 529 FDSE------RALAAAMSDLR----------------------DRIL----PPSF---LSENPKEAGFCLWQLHPEPLSR 573 (1092)
Q Consensus 529 f~~~------~~~~~~~~~~~----------------------~~~~----p~~~---~~~~~~~~~li~~lL~~dP~~R 573 (1092)
|.+. .........+. .... ++.. ...+..+.+||.+||++||.+|
T Consensus 287 f~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R 366 (392)
T PHA03207 287 LFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFR 366 (392)
T ss_pred CCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhC
Confidence 3221 11111111110 0000 0111 1234567899999999999999
Q ss_pred CCHHHHhhhhhhhhhh
Q 001366 574 PTTREILQSEVTNEFQ 589 (1092)
Q Consensus 574 psa~eiL~~~~~~~~~ 589 (1092)
||+.|+|.||||...+
T Consensus 367 psa~e~l~~p~f~~~~ 382 (392)
T PHA03207 367 PSAQDILSLPLFTKEP 382 (392)
T ss_pred CCHHHHhhCchhhccc
Confidence 9999999999997643
No 173
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=2.2e-29 Score=305.81 Aligned_cols=251 Identities=16% Similarity=0.135 Sum_probs=190.5
Q ss_pred ccceeeeCCCCCccccccccccc-cccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 222 GKGIVCRGPPLNAFKERRGMIDT-KAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
=+|-||-+...| .|+..|. +|+...........-..+.+.+...+|||++..+..-+++...+
T Consensus 1247 ~fG~VYtavN~~----tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~------------ 1310 (1509)
T KOG4645|consen 1247 TFGKVYTAVNLD----TGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVY------------ 1310 (1509)
T ss_pred ceeeeEEeecCC----ccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHH------------
Confidence 378999888754 3333333 44433222222233345556677889999998766666555555
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
+.||||+||+|.+++...+ ..++--...+..|++.||.|||++|||||||||+||+|+.+|.+||.|||.|..+.
T Consensus 1311 ----IFMEyC~~GsLa~ll~~gr-i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1311 ----IFMEYCEGGSLASLLEHGR-IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred ----HHHHHhccCcHHHHHHhcc-hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEec
Confidence 3799999999999987553 45554667788999999999999999999999999999999999999999998865
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
.+.
T Consensus 1386 ~~~----------------------------------------------------------------------------- 1388 (1509)
T KOG4645|consen 1386 NNA----------------------------------------------------------------------------- 1388 (1509)
T ss_pred Cch-----------------------------------------------------------------------------
Confidence 210
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC---CCccccchhhhHHHHHHcCCCCcHH---H
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV---CTTSSNIYSLGVLFFELFGRFDSER---A 534 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~---~t~~sDIwSLGvll~ell~~f~~~~---~ 534 (1092)
|.-...+...+||+.|||||++.+.. -..++|||||||+..||+||-.++. .
T Consensus 1389 ----------------------~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn 1446 (1509)
T KOG4645|consen 1389 ----------------------QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN 1446 (1509)
T ss_pred ----------------------hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc
Confidence 00113345789999999999999833 4679999999999999999855543 3
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhccc
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~~~ 592 (1092)
..+.|..+.....|+.....+++-.+||..||..||+.|.++.|||+|-|-....+.+
T Consensus 1447 e~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d~~ 1504 (1509)
T KOG4645|consen 1447 EWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTDED 1504 (1509)
T ss_pred hhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccccc
Confidence 4566666666666666666899999999999999999999999999999877654443
No 174
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.95 E-value=2.2e-28 Score=285.37 Aligned_cols=253 Identities=13% Similarity=0.113 Sum_probs=174.1
Q ss_pred hHHHhhhcc--ccceeeeCCCCC-ccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLN-AFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 288 (1092)
+|.+.+.++ |.|+||++.... +-......++.|+..............++..++... .|||++.++.........+
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~ 118 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVL 118 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeE
Confidence 455555554 689999876310 001112345555553332222233344566677776 8999998776644333332
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcC---------------------------------------------
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--------------------------------------------- 323 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~--------------------------------------------- 323 (1092)
.+||||.||+|.++|....
T Consensus 119 ----------------lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (374)
T cd05106 119 ----------------VITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYV 182 (374)
T ss_pred ----------------EeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccccccccccc
Confidence 3899999999999995431
Q ss_pred ------------------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 324 ------------------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 324 ------------------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
..++..+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~ 262 (374)
T cd05106 183 EMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDI 262 (374)
T ss_pred ccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeec
Confidence 13566678999999999999999999999999999999999999999999998764
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
.....
T Consensus 263 ~~~~~--------------------------------------------------------------------------- 267 (374)
T cd05106 263 MNDSN--------------------------------------------------------------------------- 267 (374)
T ss_pred cCCcc---------------------------------------------------------------------------
Confidence 31000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~ 535 (1092)
........++..|||||++.+..++.++|||||||+||||++ + |......
T Consensus 268 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~ 321 (374)
T cd05106 268 --------------------------YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN 321 (374)
T ss_pred --------------------------eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc
Confidence 000001234567999999998899999999999999999985 4 4333222
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
......+.....++.....++++.+++.+||+.||.+||++.+|++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~ 368 (374)
T cd05106 322 SKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQL 368 (374)
T ss_pred HHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 22222233222222222346889999999999999999999999873
No 175
>PTZ00284 protein kinase; Provisional
Probab=99.95 E-value=6.5e-29 Score=298.42 Aligned_cols=176 Identities=21% Similarity=0.274 Sum_probs=130.6
Q ss_pred ccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhh-cCccccCCCCCCeEEccCC----------------cE
Q 001366 306 QGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSN----------------QV 368 (1092)
Q Consensus 306 ~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs-~gIvHrDLKP~Nill~~~~----------------~v 368 (1092)
+|+++ |++|.++|...+ .++..+++.|+.||+.||+|||+ .|||||||||+|||++..+ .+
T Consensus 210 v~~~~-g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~v 287 (467)
T PTZ00284 210 VMPKY-GPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRV 287 (467)
T ss_pred EEecc-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceE
Confidence 55555 889999997664 46777999999999999999998 5999999999999998765 37
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||++....
T Consensus 288 kl~DfG~~~~~~-------------------------------------------------------------------- 299 (467)
T PTZ00284 288 RICDLGGCCDER-------------------------------------------------------------------- 299 (467)
T ss_pred EECCCCccccCc--------------------------------------------------------------------
Confidence 777777543211
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~ 528 (1092)
...+..+||++|+|||++.+..|+.++|||||||+||||++|
T Consensus 300 --------------------------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG 341 (467)
T PTZ00284 300 --------------------------------------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTG 341 (467)
T ss_pred --------------------------------------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhC
Confidence 001145789999999999999999999999999999999996
Q ss_pred ---CCcHHHHHHH--HHhccccC----------------------CCCC----------------CCCCChhHHHHHHhc
Q 001366 529 ---FDSERALAAA--MSDLRDRI----------------------LPPS----------------FLSENPKEAGFCLWQ 565 (1092)
Q Consensus 529 ---f~~~~~~~~~--~~~~~~~~----------------------~p~~----------------~~~~~~~~~~li~~l 565 (1092)
|.+....... +....... +.+. .....+.+.+||.+|
T Consensus 342 ~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~m 421 (467)
T PTZ00284 342 KLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGL 421 (467)
T ss_pred CCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHh
Confidence 5433222111 11110000 0000 001235577999999
Q ss_pred cccCCCCCCCHHHHhhhhhhhhhh
Q 001366 566 LHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 566 L~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
|++||.+|||++|+|+||||....
T Consensus 422 L~~dP~~R~ta~e~L~Hp~~~~~~ 445 (467)
T PTZ00284 422 LHYDRQKRLNARQMTTHPYVLKYY 445 (467)
T ss_pred CCcChhhCCCHHHHhcCccccccC
Confidence 999999999999999999998743
No 176
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.95 E-value=1.3e-28 Score=282.63 Aligned_cols=247 Identities=14% Similarity=0.091 Sum_probs=174.0
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC-ch-hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.++.|.||++...+ .+..++.|+...... .. ....-..+..++....|++++.+......+...+
T Consensus 11 ~G~fg~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~--------- 77 (332)
T cd05623 11 RGAFGEVAVVKLKN----ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLY--------- 77 (332)
T ss_pred eCCCeEEEEEEECC----CCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEE---------
Confidence 34679999987633 233444444321111 11 1111223344566778999887665544333222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++|||+.||+|.++|......++...++.++.||+.||+|||++||+||||||+|||++.++.+|++|||+++
T Consensus 78 -------lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~ 150 (332)
T cd05623 78 -------LVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCL 150 (332)
T ss_pred -------EEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchhe
Confidence 3899999999999998755567888899999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
......
T Consensus 151 ~~~~~~-------------------------------------------------------------------------- 156 (332)
T cd05623 151 KLMEDG-------------------------------------------------------------------------- 156 (332)
T ss_pred ecccCC--------------------------------------------------------------------------
Confidence 533100
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-----CCCCccccchhhhHHHHHHcCC---C
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----GVCTTSSNIYSLGVLFFELFGR---F 529 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----~~~t~~sDIwSLGvll~ell~~---f 529 (1092)
.......+||+.|+|||++.+ ..++.++|||||||+||||++| |
T Consensus 157 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf 208 (332)
T cd05623 157 ----------------------------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPF 208 (332)
T ss_pred ----------------------------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCC
Confidence 000013578999999999863 4689999999999999999986 4
Q ss_pred CcHHHHHHHHHhccc---cCCCCCCCCCChhHHHHHHhccccCCCC--CCCHHHHhhhhhhhhh
Q 001366 530 DSERALAAAMSDLRD---RILPPSFLSENPKEAGFCLWQLHPEPLS--RPTTREILQSEVTNEF 588 (1092)
Q Consensus 530 ~~~~~~~~~~~~~~~---~~~p~~~~~~~~~~~~li~~lL~~dP~~--Rpsa~eiL~~~~~~~~ 588 (1092)
............... ...|......++.+.+|+.+||..+|.. |+++.++++||||...
T Consensus 209 ~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 209 YAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred CCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 433332222222222 2234445567888999999999765544 6899999999999764
No 177
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.95 E-value=3.2e-28 Score=269.75 Aligned_cols=247 Identities=17% Similarity=0.197 Sum_probs=176.7
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+.+.+ +|.|.||++.... .+..++.|+..... .........+..++...+|||++........+...+
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~----~~~~~~ik~~~~~~-~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~-- 82 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVN----TGELAAIKVIKLEP-GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLW-- 82 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcC----CCcEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEE--
Confidence 45555555 4789999997632 23445554432221 122223344556677889999998777655433333
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
.+|||++|++|.+++...+ .++..+++.++.||+.||+|||++||+|+||||+||+++.++.+|+
T Consensus 83 --------------lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l 147 (267)
T cd06645 83 --------------ICMEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKL 147 (267)
T ss_pred --------------EEEeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEE
Confidence 3899999999999997665 4677799999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||++.......
T Consensus 148 ~dfg~~~~~~~~~------------------------------------------------------------------- 160 (267)
T cd06645 148 ADFGVSAQITATI------------------------------------------------------------------- 160 (267)
T ss_pred CcceeeeEccCcc-------------------------------------------------------------------
Confidence 9999876533100
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc---CCCCCccccchhhhHHHHHHcC
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS---GGVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~t~~sDIwSLGvll~ell~ 527 (1092)
.......|+..|+|||.+. ...++.++|||||||++|||++
T Consensus 161 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~ 204 (267)
T cd06645 161 ------------------------------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAE 204 (267)
T ss_pred ------------------------------------cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhc
Confidence 0001346888999999985 4568899999999999999998
Q ss_pred CCCc---HHHHHHHHHhccccCCCCCC---CCCChhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001366 528 RFDS---ERALAAAMSDLRDRILPPSF---LSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1092)
Q Consensus 528 ~f~~---~~~~~~~~~~~~~~~~p~~~---~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~ 584 (1092)
+..+ ................++.+ ...++.+.+|+.+||.++|++||++.+|++|||
T Consensus 205 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 205 LQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred CCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 6222 22222222222222222222 234577899999999999999999999999998
No 178
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.95 E-value=1.7e-28 Score=275.29 Aligned_cols=244 Identities=16% Similarity=0.168 Sum_probs=177.1
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCch--hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS--DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.++.|.||++.... .+..++.|+........ ......++..+++...||+++........+...+
T Consensus 10 ~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--------- 76 (285)
T cd05605 10 KGGFGEVCACQVRA----TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC--------- 76 (285)
T ss_pred cCCCeEEEEEEEcC----CCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEE---------
Confidence 45679999987532 24555655442221111 1122344667788889999997655543332222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
++|||++|++|.+++.... ..++..++..++.||+.||.|||++||+||||||+||+++.++.++++|||++
T Consensus 77 -------lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~ 149 (285)
T cd05605 77 -------LVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred -------EEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCc
Confidence 3899999999999986543 45788899999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.....
T Consensus 150 ~~~~~~-------------------------------------------------------------------------- 155 (285)
T cd05605 150 VEIPEG-------------------------------------------------------------------------- 155 (285)
T ss_pred eecCCC--------------------------------------------------------------------------
Confidence 653200
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
......+|+..|+|||++.+..++.++|||||||++|||+++ |.+..
T Consensus 156 ------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~ 205 (285)
T cd05605 156 ------------------------------ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRK 205 (285)
T ss_pred ------------------------------CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCc
Confidence 000134688999999999998899999999999999999986 44322
Q ss_pred HH---HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 534 AL---AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 534 ~~---~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
.. ......+... .+......++.+.+|+.+||+.||.+|| ++.++++||||...
T Consensus 206 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 206 EKVKREEVERRVKED-QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred hhhHHHHHHHHhhhc-ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 21 1222222211 1122234578889999999999999999 89999999999863
No 179
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.95 E-value=2.6e-28 Score=279.55 Aligned_cols=251 Identities=15% Similarity=0.148 Sum_probs=172.5
Q ss_pred ccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
|.|.||++... ..++.++.|..-... ..........+..+++..+|||++.++.....+...+
T Consensus 12 ~~~~v~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~------------ 75 (327)
T cd08227 12 DLMTVNLARYK----PTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW------------ 75 (327)
T ss_pred ceEEEEEEeec----ccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEE------------
Confidence 46789998873 235556665542221 1122233444566777889999998776655443333
Q ss_pred cCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+|||+++++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+.....
T Consensus 76 ----lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~ 151 (327)
T cd08227 76 ----VVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSM 151 (327)
T ss_pred ----EEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcc
Confidence 389999999999999653 334778899999999999999999999999999999999999999999999765432
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
...... .+. +.++
T Consensus 152 ~~~~~~-----------~~~----------------------------------------------~~~~---------- 164 (327)
T cd08227 152 INHGQR-----------LRV----------------------------------------------VHDF---------- 164 (327)
T ss_pred cccccc-----------ccc----------------------------------------------cccc----------
Confidence 210000 000 0000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC--CCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~--~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
-....++..|+|||++.+ ..++.++|||||||++|||+++ |.....
T Consensus 165 -----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 215 (327)
T cd08227 165 -----------------------------PKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA 215 (327)
T ss_pred -----------------------------cccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence 002246677999999976 4589999999999999999986 332221
Q ss_pred HHHHHHhccccC--------C------------------------------------CCCCCCCChhHHHHHHhccccCC
Q 001366 535 LAAAMSDLRDRI--------L------------------------------------PPSFLSENPKEAGFCLWQLHPEP 570 (1092)
Q Consensus 535 ~~~~~~~~~~~~--------~------------------------------------p~~~~~~~~~~~~li~~lL~~dP 570 (1092)
............ . .+.....++.+.+|+.+||++||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP 295 (327)
T cd08227 216 TQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNP 295 (327)
T ss_pred hHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCc
Confidence 111111111100 0 00111235678899999999999
Q ss_pred CCCCCHHHHhhhhhhhhh
Q 001366 571 LSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 571 ~~Rpsa~eiL~~~~~~~~ 588 (1092)
++|||++++|+||||...
T Consensus 296 ~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 296 DARPSASTLLNHSFFKQI 313 (327)
T ss_pred hhcCCHHHHhcChhhhhc
Confidence 999999999999999764
No 180
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.95 E-value=5.1e-28 Score=270.66 Aligned_cols=250 Identities=13% Similarity=0.073 Sum_probs=178.5
Q ss_pred HHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCcc
Q 001366 215 FVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGAR 292 (1092)
Q Consensus 215 ~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (1092)
.+.+.+ +|.|.||+|.... .+..++.+.....+ .........+...+....|||++.+......+...+
T Consensus 8 ~i~~~lg~g~~g~v~~~~~~~----~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~---- 78 (282)
T cd06643 8 EIIGELGDGAFGKVYKAQNKE----TGVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW---- 78 (282)
T ss_pred HHHhhcccCCCeEEEEEEECC----CCeEEEEEEeCCCC-HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEE----
Confidence 444444 4689999998632 23333443332111 122233344556777889999998766544332222
Q ss_pred CCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEec
Q 001366 293 TGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIG 372 (1092)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~D 372 (1092)
.+|||+.|++|.+++......++...++.++.||+.||.|||+.||+||||||+||+++.++.+|++|
T Consensus 79 ------------~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~d 146 (282)
T cd06643 79 ------------ILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLAD 146 (282)
T ss_pred ------------EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcc
Confidence 48999999999999876555688889999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCC
Q 001366 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1092)
Q Consensus 373 fg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 452 (1092)
||+++......
T Consensus 147 fg~~~~~~~~~--------------------------------------------------------------------- 157 (282)
T cd06643 147 FGVSAKNTRTI--------------------------------------------------------------------- 157 (282)
T ss_pred ccccccccccc---------------------------------------------------------------------
Confidence 99876532100
Q ss_pred CCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc-----CCCCCccccchhhhHHHHHHcC
Q 001366 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS-----GGVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-----~~~~t~~sDIwSLGvll~ell~ 527 (1092)
.......||..|+|||.+. +..++.++|||||||++|||++
T Consensus 158 ----------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~ 203 (282)
T cd06643 158 ----------------------------------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQ 203 (282)
T ss_pred ----------------------------------cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHcc
Confidence 0001345788899999984 3557889999999999999998
Q ss_pred C---CCcHHHHHHHHHhccccC-CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 528 R---FDSERALAAAMSDLRDRI-LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 528 ~---f~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
+ |................. ..+.....+..+.+|+.+||+++|.+||++.++++||||...
T Consensus 204 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 204 IEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred CCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 5 433333333333322221 112223456789999999999999999999999999999764
No 181
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.95 E-value=5.8e-28 Score=277.85 Aligned_cols=254 Identities=15% Similarity=0.138 Sum_probs=176.4
Q ss_pred hHHHhhhcc--ccceeeeCCCCCc-cccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNA-FKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 288 (1092)
+|.+.+.++ |.|+||++...+. -...+..++.|++.............++..++... .|||++.++..........
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~ 87 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL 87 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence 566665554 7899999975321 11123456666554332333333445566666666 7899998766533211111
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcC---------------------------------------------
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--------------------------------------------- 323 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~--------------------------------------------- 323 (1092)
..+|+|+.|++|.++|....
T Consensus 88 ---------------~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (337)
T cd05054 88 ---------------MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKS 152 (337)
T ss_pred ---------------EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcc
Confidence 13799999999999996432
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccccccccCCCC
Q 001366 324 ---------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIP 388 (1092)
Q Consensus 324 ---------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~ 388 (1092)
..++...+..++.||+.||+|||++||+||||||+||+++.++.+|++|||+++.+......
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~--- 229 (337)
T cd05054 153 LSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--- 229 (337)
T ss_pred hhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcch---
Confidence 14677789999999999999999999999999999999999999999999998765310000
Q ss_pred CCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCC
Q 001366 389 HSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFG 468 (1092)
Q Consensus 389 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 468 (1092)
T Consensus 230 -------------------------------------------------------------------------------- 229 (337)
T cd05054 230 -------------------------------------------------------------------------------- 229 (337)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHHHHHHHhccc
Q 001366 469 NYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRD 544 (1092)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~~~~~~~~~~ 544 (1092)
.......++..|+|||++.+..++.++|||||||+||||++ + |............+..
T Consensus 230 ------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~ 291 (337)
T cd05054 230 ------------------VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE 291 (337)
T ss_pred ------------------hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc
Confidence 00002344567999999999999999999999999999996 4 4322211222222222
Q ss_pred cCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 545 RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 545 ~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
...+.......+++.+++.+||+.+|++||++.||+++
T Consensus 292 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 292 GTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred cCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 22222233457889999999999999999999999985
No 182
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.95 E-value=4.2e-28 Score=283.10 Aligned_cols=253 Identities=13% Similarity=0.101 Sum_probs=172.5
Q ss_pred hHHHhhhc--cccceeeeCCCCCc-cccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNA-FKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 288 (1092)
.|.+.+.+ +|.|.||++..--. ....+..++.|+..............++..++... .|||++.++.........+
T Consensus 36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~ 115 (375)
T cd05104 36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTL 115 (375)
T ss_pred HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcce
Confidence 35555544 46899998852100 01113345555543222222223344566667666 8999998776544333322
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcC---------------------------------------------
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--------------------------------------------- 323 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~--------------------------------------------- 323 (1092)
.+||||.||+|.++|....
T Consensus 116 ----------------lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 179 (375)
T cd05104 116 ----------------VITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVV 179 (375)
T ss_pred ----------------eeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccc
Confidence 3899999999999996532
Q ss_pred -----------------------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccc
Q 001366 324 -----------------------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1092)
Q Consensus 324 -----------------------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg 374 (1092)
..++...++.++.||+.||.|||++||+||||||+|||++.++.+|++|||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG 259 (375)
T cd05104 180 PTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFG 259 (375)
T ss_pred ccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCc
Confidence 135667889999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++........
T Consensus 260 ~a~~~~~~~~~--------------------------------------------------------------------- 270 (375)
T cd05104 260 LARDIRNDSNY--------------------------------------------------------------------- 270 (375)
T ss_pred cceeccCcccc---------------------------------------------------------------------
Confidence 98764310000
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CC
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FD 530 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~ 530 (1092)
.......++..|+|||.+.+..++.++|||||||+||||++ + |.
T Consensus 271 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~ 318 (375)
T cd05104 271 --------------------------------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYP 318 (375)
T ss_pred --------------------------------cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCC
Confidence 00001234566999999999999999999999999999996 3 43
Q ss_pred cHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 531 SERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 531 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
...........+.....+......++++.+|+.+||++||++||++.+|++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 319 GMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred CCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 3222222223333222222222346788999999999999999999999874
No 183
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.95 E-value=1.1e-26 Score=266.27 Aligned_cols=283 Identities=20% Similarity=0.289 Sum_probs=243.9
Q ss_pred eeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCc
Q 001366 773 GEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV 852 (1092)
Q Consensus 773 ~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dgt 852 (1092)
-.+.+|.+.|.+++|+.+...+++|+ .+.|+||+..+. .....+. ...+.|.+|-|. +.++++|...|.
T Consensus 367 i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~--------kciRTi~-~~y~l~~~Fvpg-d~~Iv~G~k~Ge 435 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTL--------KCIRTIT-CGYILASKFVPG-DRYIVLGTKNGE 435 (888)
T ss_pred eeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCc--------ceeEEec-cccEEEEEecCC-CceEEEeccCCc
Confidence 35679999999999999988888875 568999998751 1112222 348899999996 889999999999
Q ss_pred EEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCC-----Cc--e------eeeEecCCceEEE
Q 001366 853 VKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE-----KN--S------LATIKNIANVCCV 919 (1092)
Q Consensus 853 V~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~-----~~--~------l~~l~~~~~V~sl 919 (1092)
+.++|+.+...+.+..+|.+.||+++.+| ++..+++||.|.+|++||..- +. . ..++.....|.|+
T Consensus 436 l~vfdlaS~~l~Eti~AHdgaIWsi~~~p-D~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v 514 (888)
T KOG0306|consen 436 LQVFDLASASLVETIRAHDGAIWSISLSP-DNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCV 514 (888)
T ss_pred eEEEEeehhhhhhhhhccccceeeeeecC-CCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEE
Confidence 99999999998888899999999999999 889999999999999999852 11 1 1344456789999
Q ss_pred EEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCce
Q 001366 920 QFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNAC 998 (1092)
Q Consensus 920 ~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~ 998 (1092)
.++||+. +||++--|++|+||=+.+.+- .-.+-||.=+|.|+..+ ++..++|||.|..|+||-+. .+.|
T Consensus 515 ~~Spdgk-~LaVsLLdnTVkVyflDtlKF-flsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLd--------FGDC 584 (888)
T KOG0306|consen 515 SVSPDGK-LLAVSLLDNTVKVYFLDTLKF-FLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLD--------FGDC 584 (888)
T ss_pred EEcCCCc-EEEEEeccCeEEEEEecceee-eeeecccccceeEEeccCCcCeEEeccCCCceEEeccc--------cchh
Confidence 9999995 999999999999999988753 45678999999999999 77899999999999999998 6889
Q ss_pred eEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEE
Q 001366 999 SLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVV 1078 (1092)
Q Consensus 999 ~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~La 1078 (1092)
.+++.+|...|.+|.|-|...++.++|.|+.|+-||-..-..++. ..+|...|++++.+|+|.+++
T Consensus 585 HKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~--------------L~~H~~ev~cLav~~~G~~vv 650 (888)
T KOG0306|consen 585 HKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQK--------------LDGHHSEVWCLAVSPNGSFVV 650 (888)
T ss_pred hhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhhee--------------eccchheeeeeEEcCCCCeEE
Confidence 999999999999999999999999999999999998665554443 357888999999999999999
Q ss_pred EEecCCeEEEEEc
Q 001366 1079 AANSSGCIKVLQM 1091 (1092)
Q Consensus 1079 sgs~DG~V~vW~l 1091 (1092)
++|.|.+|++|+.
T Consensus 651 s~shD~sIRlwE~ 663 (888)
T KOG0306|consen 651 SSSHDKSIRLWER 663 (888)
T ss_pred eccCCceeEeeec
Confidence 9999999999974
No 184
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.95 E-value=3.6e-28 Score=268.35 Aligned_cols=251 Identities=16% Similarity=0.137 Sum_probs=179.1
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCch----hhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS----DAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
|.+.+.++ +.|.||++...+ .+..++.|......... ......++...+...+|||++.++.....+...
T Consensus 4 ~~~~~~lg~g~~~~vy~~~~~~----~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 79 (263)
T cd06625 4 WRRGKLLGQGAFGRVYLCYDVD----TGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETL 79 (263)
T ss_pred ccccceecCCCceEEEEEEEcC----CCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeE
Confidence 34444443 579999987522 23444444432211111 112234455677888999999876665443322
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~ 367 (1092)
+ .++||+.|++|.+++...+ .++...++.++.||+.||.|||++||+||||||+||+++.++.
T Consensus 80 ~----------------~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~ 142 (263)
T cd06625 80 S----------------IFMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGN 142 (263)
T ss_pred E----------------EEEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC
Confidence 2 3799999999999997654 4677789999999999999999999999999999999999999
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
++++|||+++.......
T Consensus 143 ~~l~dfg~~~~~~~~~~--------------------------------------------------------------- 159 (263)
T cd06625 143 VKLGDFGASKRLQTICS--------------------------------------------------------------- 159 (263)
T ss_pred EEEeecccceecccccc---------------------------------------------------------------
Confidence 99999998865431000
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~ 527 (1092)
.........|+.+|+|||.+.+..++.++|||||||++|||++
T Consensus 160 -------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 202 (263)
T cd06625 160 -------------------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLT 202 (263)
T ss_pred -------------------------------------ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHh
Confidence 0000013457788999999999889999999999999999999
Q ss_pred C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 528 R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 528 ~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
+ |..................++.....++.+.+|+.+||..+|.+||++.++|+|+||
T Consensus 203 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 203 EKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred CCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 6 333333333333333323333334557889999999999999999999999999997
No 185
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=5.7e-27 Score=274.80 Aligned_cols=252 Identities=19% Similarity=0.308 Sum_probs=205.7
Q ss_pred Eeeeec-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCC---------------------------CCC--------
Q 001366 771 RTGEFN-NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNAL---------------------------FND-------- 814 (1092)
Q Consensus 771 ~~~~l~-~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~---------------------------~~~-------- 814 (1092)
....+. .|.+.|.++.|++||+|||+||.|+.|+||.+... ...
T Consensus 258 ~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s 337 (712)
T KOG0283|consen 258 VVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTS 337 (712)
T ss_pred EeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccc
Confidence 334566 89999999999999999999999999999987540 000
Q ss_pred ----Cc---c----------cccc-eeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEE
Q 001366 815 ----SV---D----------VYYP-AVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWS 876 (1092)
Q Consensus 815 ----~~---~----------~~~~-~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~s 876 (1092)
.. . ...| ....+|.+.|.++.|+. .++|+|+|.|+|||||++....|++.|. |.+-|+|
T Consensus 338 ~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK--n~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTc 414 (712)
T KOG0283|consen 338 SSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK--NNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTC 414 (712)
T ss_pred ccccccCCccccCCCccccccccchhhhhccchhheeccccc--CCeeEeccccccEEeecCCCcceeeEEe-cCCeeEE
Confidence 00 0 0111 23467999999999998 5899999999999999999999999996 9999999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEE-e--
Q 001366 877 VDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCV-L-- 953 (1092)
Q Consensus 877 v~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~-l-- 953 (1092)
|+|+|.|.++|+|||-||.|+||++...+.+.-.....-|++++|.|+|. ..+.|+.+|.+++|+++..+..... +
T Consensus 415 VaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk-~avIGt~~G~C~fY~t~~lk~~~~~~I~~ 493 (712)
T KOG0283|consen 415 VAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGK-GAVIGTFNGYCRFYDTEGLKLVSDFHIRL 493 (712)
T ss_pred EEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCc-eEEEEEeccEEEEEEccCCeEEEeeeEee
Confidence 99999999999999999999999999888777777788999999999985 8999999999999999876431111 0
Q ss_pred -----cCCCCCeEEEEEcCC--CEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCC--eEEEEEecCCCEEEEE
Q 001366 954 -----AGHEKAVSYVKFLDS--GTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNE--KNFVGLSTADGYIACG 1024 (1092)
Q Consensus 954 -----~~H~~~V~~v~fs~~--~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~--V~~v~~spdg~~lasg 1024 (1092)
..|. .|+.+.|.++ ..++..+.|..|+|+|.++ ...+..|+|+.+. -....|+.||++|+||
T Consensus 494 ~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~--------~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~ 564 (712)
T KOG0283|consen 494 HNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRD--------KDLVHKFKGFRNTSSQISASFSSDGKHIVSA 564 (712)
T ss_pred ccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccc--------hhhhhhhcccccCCcceeeeEccCCCEEEEe
Confidence 1233 7999999733 4588888999999999973 3456677765443 3456899999999999
Q ss_pred ecCCcEEEEeC
Q 001366 1025 SESNEVYAYHR 1035 (1092)
Q Consensus 1025 s~Dg~I~Iwd~ 1035 (1092)
++|..|+||+.
T Consensus 565 seDs~VYiW~~ 575 (712)
T KOG0283|consen 565 SEDSWVYIWKN 575 (712)
T ss_pred ecCceEEEEeC
Confidence 99999999996
No 186
>PHA02988 hypothetical protein; Provisional
Probab=99.95 E-value=3.3e-28 Score=272.88 Aligned_cols=239 Identities=14% Similarity=0.059 Sum_probs=173.8
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchh--hHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD--AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
.-+|.|.||+|... +..++.|++........ ...-.++...+...+|||++.++........ ..+
T Consensus 29 ~~g~~~~v~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~-------~~~ 95 (283)
T PHA02988 29 KENDQNSIYKGIFN------NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVD-------DLP 95 (283)
T ss_pred eeCCceEEEEEEEC------CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEeccc-------CCC
Confidence 45688999999873 34555555433222111 1233467778889999999987755432000 000
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhh-cCccccCCCCCCeEEccCCcEEEecccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs-~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
.. .++|||+.||+|.++|...+ .++....+.++.|++.||.|||+ .+++||||||+||+++.++.+|++|||+
T Consensus 96 ~~-----~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~ 169 (283)
T PHA02988 96 RL-----SLILEYCTRGYLREVLDKEK-DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGL 169 (283)
T ss_pred ce-----EEEEEeCCCCcHHHHHhhCC-CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccch
Confidence 11 14899999999999997654 56777899999999999999998 5999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++.+..+.
T Consensus 170 ~~~~~~~~------------------------------------------------------------------------ 177 (283)
T PHA02988 170 EKILSSPP------------------------------------------------------------------------ 177 (283)
T ss_pred Hhhhcccc------------------------------------------------------------------------
Confidence 87543100
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC--CCCCccccchhhhHHHHHHcCC---CC
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLFFELFGR---FD 530 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~--~~~t~~sDIwSLGvll~ell~~---f~ 530 (1092)
...+||..|+|||++.+ ..++.++|||||||++|||+++ |.
T Consensus 178 ----------------------------------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~ 223 (283)
T PHA02988 178 ----------------------------------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFE 223 (283)
T ss_pred ----------------------------------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCC
Confidence 02356788999999977 6799999999999999999985 54
Q ss_pred cHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 531 SERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 531 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
.................++.....++.+.+|+.+||+.||.+|||+.|+++.
T Consensus 224 ~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 224 NLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred CCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 4333332222222222222223567889999999999999999999999873
No 187
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.4e-28 Score=274.42 Aligned_cols=241 Identities=15% Similarity=0.120 Sum_probs=178.4
Q ss_pred hccccceeeeCCCCCcccccccccccccc--ccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAF--VTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
+.+.+|.||.+...- ..+.+++|-. +|......-.--+++++.|+..+|||++. .
T Consensus 35 GHGSFGAVYfArd~~----n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntie-------------------Y 91 (948)
T KOG0577|consen 35 GHGSFGAVYFARDVR----NSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIE-------------------Y 91 (948)
T ss_pred cCCccceeEEeeccC----ccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCccc-------------------c
Confidence 345689999998732 2344444332 22222222334678899999999999885 1
Q ss_pred Cccc---cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecc
Q 001366 297 ASCW---IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGP 373 (1092)
Q Consensus 297 ~~~~---~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Df 373 (1092)
..|| +-.+++||||-| +-.|+|.-....+-+.++..|+.+.|.||.|||+.+.||||||..||||+..|.||++||
T Consensus 92 kgCyLre~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDF 170 (948)
T KOG0577|consen 92 KGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADF 170 (948)
T ss_pred cceeeccchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccc
Confidence 3455 346789999987 344444433345777799999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCC
Q 001366 374 IIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPH 453 (1092)
Q Consensus 374 g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 453 (1092)
|.+....
T Consensus 171 GSAsi~~------------------------------------------------------------------------- 177 (948)
T KOG0577|consen 171 GSASIMA------------------------------------------------------------------------- 177 (948)
T ss_pred cchhhcC-------------------------------------------------------------------------
Confidence 9876533
Q ss_pred CCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC---CCCCccccchhhhHHHHHHcCC--
Q 001366 454 SHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---GVCTTSSNIYSLGVLFFELFGR-- 528 (1092)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~---~~~t~~sDIwSLGvll~ell~~-- 528 (1092)
...+++|||+|||||+|.. +.|+-++||||||++..||...
T Consensus 178 ----------------------------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkP 223 (948)
T KOG0577|consen 178 ----------------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 223 (948)
T ss_pred ----------------------------------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCC
Confidence 0127899999999999875 7899999999999999999974
Q ss_pred -CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 529 -FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 529 -f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
+..-+...+++.+.....+--.-...+..++.|+..||.+=|.+|||.+++|.|+|+...+.
T Consensus 224 PlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp 286 (948)
T KOG0577|consen 224 PLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERP 286 (948)
T ss_pred CccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCC
Confidence 22233444444443322111112334677999999999999999999999999999976543
No 188
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.95 E-value=3.7e-29 Score=275.37 Aligned_cols=243 Identities=21% Similarity=0.266 Sum_probs=178.9
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhH-hhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAA-LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..||.|.||++.... .++..+.|+........... ...++...+...+|||++.+.+....+...+
T Consensus 8 g~G~~g~v~~~~~~~----~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~--------- 74 (260)
T PF00069_consen 8 GSGGFGTVYKAKNKK----NGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLY--------- 74 (260)
T ss_dssp EEESSEEEEEEEETT----TTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEE---------
T ss_pred EeCCCEEEEEEEECC----CCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccc---------
Confidence 346889999999844 23455666654443333322 2234666777789999998777665433333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
.+|+|+.+++|.++|... ..++..+++.++.||++||+|||++||+|+||||+||+++.++.++++|||.+.
T Consensus 75 -------~v~~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 75 -------IVMEYCPGGSLQDYLQKN-KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp -------EEEEEETTEBHHHHHHHH-SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred -------cccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 389999999999999843 357888999999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.....
T Consensus 147 ~~~~~--------------------------------------------------------------------------- 151 (260)
T PF00069_consen 147 KLSEN--------------------------------------------------------------------------- 151 (260)
T ss_dssp ESTST---------------------------------------------------------------------------
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 53100
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc-CCCCCccccchhhhHHHHHHcCC---CCcH-
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS-GGVCTTSSNIYSLGVLFFELFGR---FDSE- 532 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-~~~~t~~sDIwSLGvll~ell~~---f~~~- 532 (1092)
........+|.+|+|||++. +..++.++|||||||++|+|+++ |...
T Consensus 152 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~ 203 (260)
T PF00069_consen 152 ----------------------------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESN 203 (260)
T ss_dssp ----------------------------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSS
T ss_pred ----------------------------cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00112456788999999998 78899999999999999999986 3332
Q ss_pred -HHHHHHHHhccccCCCCCC---CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 533 -RALAAAMSDLRDRILPPSF---LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 533 -~~~~~~~~~~~~~~~p~~~---~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
......+.......++... ....+.+.+|+.+||+.||++||++.++++||||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 204 SDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred chhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 1222222222221111111 1123788999999999999999999999999997
No 189
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.95 E-value=5.2e-28 Score=265.77 Aligned_cols=241 Identities=17% Similarity=0.176 Sum_probs=177.5
Q ss_pred cccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
+|.|.||++...+ .+..++.|....... .........+...++..+|||++........+...+
T Consensus 11 g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~----------- 75 (256)
T cd08529 11 GSFGVVFKVVRKA----DKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLN----------- 75 (256)
T ss_pred CCCeEEEEEEEcC----CCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEE-----------
Confidence 4678999987632 233444443322221 222333444566678889999998766544332222
Q ss_pred ccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
++|||+.|++|.++|... +..++...++.++.||+.||.|||++||+|+||||+||+++.++.+|++|||+++.
T Consensus 76 -----lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~ 150 (256)
T cd08529 76 -----IVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKL 150 (256)
T ss_pred -----EEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEccccccee
Confidence 389999999999999764 55678888999999999999999999999999999999999999999999998775
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+....
T Consensus 151 ~~~~~--------------------------------------------------------------------------- 155 (256)
T cd08529 151 LSDNT--------------------------------------------------------------------------- 155 (256)
T ss_pred ccCcc---------------------------------------------------------------------------
Confidence 43100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
.......|+++|+|||.+.+..++.++|||||||++|||+++ |......
T Consensus 156 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 207 (256)
T cd08529 156 ----------------------------NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG 207 (256)
T ss_pred ----------------------------chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 000134578899999999998899999999999999999986 4333332
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
.... .......++.....++.+.+++.+||+.+|++||++.++++|||+
T Consensus 208 ~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 208 ALIL-KIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHH-HHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 2222 222333344333567889999999999999999999999999985
No 190
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=2.6e-26 Score=247.88 Aligned_cols=292 Identities=15% Similarity=0.181 Sum_probs=234.7
Q ss_pred cccchhhhccchhhhhhccccccCCCCc--EEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEE
Q 001366 720 RADNDLLRDRENLFLAQQDQEIQNPTDR--LGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAA 797 (1092)
Q Consensus 720 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~--l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latg 797 (1092)
..+-+++..|.+.+..+.+ +++++ .+++.|.+..+|....-.. .....++.+|..+|.-|.|+||.+||++|
T Consensus 214 ~qt~qil~~htdEVWfl~F----S~nGkyLAsaSkD~Taiiw~v~~d~~--~kl~~tlvgh~~~V~yi~wSPDdryLlaC 287 (519)
T KOG0293|consen 214 SQTWQILQDHTDEVWFLQF----SHNGKYLASASKDSTAIIWIVVYDVH--FKLKKTLVGHSQPVSYIMWSPDDRYLLAC 287 (519)
T ss_pred chhhhhHhhCCCcEEEEEE----cCCCeeEeeccCCceEEEEEEecCcc--eeeeeeeecccCceEEEEECCCCCeEEec
Confidence 3445778888887776654 44444 4778999999998643221 11134678999999999999999999999
Q ss_pred eCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccC-ccEEE
Q 001366 798 GVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHE-KRAWS 876 (1092)
Q Consensus 798 g~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~-~~V~s 876 (1092)
|.|..+.+||+.+... ...++ .++...+.+++|.|| +..+++|+.|++|..||++ |..+...++-. ..|++
T Consensus 288 g~~e~~~lwDv~tgd~---~~~y~---~~~~~S~~sc~W~pD-g~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~d 359 (519)
T KOG0293|consen 288 GFDEVLSLWDVDTGDL---RHLYP---SGLGFSVSSCAWCPD-GFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHD 359 (519)
T ss_pred CchHheeeccCCcchh---hhhcc---cCcCCCcceeEEccC-CceeEecCCCCcEEEecCC-cchhhcccccccceeEE
Confidence 9999999999986321 11111 224578999999999 8899999999999999985 55555555433 46999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCC
Q 001366 877 VDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGH 956 (1092)
Q Consensus 877 v~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H 956 (1092)
++..+ ||+.+++...|..|++++.++......+....+|++++.+.++. ++++.-.+..+++||+...+ .+..+.||
T Consensus 360 lait~-Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k-~~LvnL~~qei~LWDl~e~~-lv~kY~Gh 436 (519)
T KOG0293|consen 360 LAITY-DGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGK-LALVNLQDQEIHLWDLEENK-LVRKYFGH 436 (519)
T ss_pred EEEcC-CCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCc-EEEEEcccCeeEEeecchhh-HHHHhhcc
Confidence 99999 89999999999999999999888887888889999999999995 88889999999999999554 45667788
Q ss_pred CCCeEEE--EEc--CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCC-EEEEEecCCcEE
Q 001366 957 EKAVSYV--KFL--DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADG-YIACGSESNEVY 1031 (1092)
Q Consensus 957 ~~~V~~v--~fs--~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~-~lasgs~Dg~I~ 1031 (1092)
+..-.-+ +|- +..+++|||.|+.|+||+.. .+.++.++.||...|++|+|+|... ++|++|+||+|+
T Consensus 437 kq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~--------sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIR 508 (519)
T KOG0293|consen 437 KQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRI--------SGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIR 508 (519)
T ss_pred cccceEEEeccCCCCcceEEecCCCceEEEEEcc--------CCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEE
Confidence 7643333 443 66789999999999999998 5778999999999999999999764 799999999999
Q ss_pred EEeCC
Q 001366 1032 AYHRS 1036 (1092)
Q Consensus 1032 Iwd~~ 1036 (1092)
||-..
T Consensus 509 IWg~~ 513 (519)
T KOG0293|consen 509 IWGPS 513 (519)
T ss_pred EecCC
Confidence 99643
No 191
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=1.4e-28 Score=293.47 Aligned_cols=272 Identities=18% Similarity=0.175 Sum_probs=184.6
Q ss_pred CcCCccccCcceeeecccCCchhHHHhhhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCC
Q 001366 191 LSGNMLSHGSIRTKMLSKSGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNA 270 (1092)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (1092)
+.+-++..|+.+-+|.- .-+-+|++.||.++....- ..+|.|..+.. ...+-+...+++..+..++
T Consensus 27 ~~G~~~~Vg~~~v~V~~---------vLAEGGFa~VYla~~~~~~----~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~ 92 (738)
T KOG1989|consen 27 FVGQTFTVGSHRVTVEK---------VLAEGGFAQVYLAQDVKGG----KKYALKRMYVN-DEEALNAVKREIDIMKLLS 92 (738)
T ss_pred CCceEEEECCEEEEEEE---------EEccCCcEEEEEEEecCCC----ceeeeeeeecC-CHHHHHHHHHHHHHHHHhc
Confidence 33455556665555321 1133466667766664421 33444433333 2334455666666677775
Q ss_pred -CCCCCccccc-eecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhh
Q 001366 271 -SPKPVGVGTA-VVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHT 347 (1092)
Q Consensus 271 -~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs 347 (1092)
|+|||..+++ ....... .++ ....++||||.||.|-|+|+.+ ...+++.+++.||.|+++||.+||.
T Consensus 93 gh~nIV~yidss~~~~~~~-----~~~-----~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~ 162 (738)
T KOG1989|consen 93 GHKNIVSYIDSSAINRSSN-----NGV-----WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY 162 (738)
T ss_pred CCCceeeEeccccccccCC-----Cce-----eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 9999998885 2211111 111 1245799999999999999753 3348888999999999999999999
Q ss_pred cC--ccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCccccc
Q 001366 348 QG--VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSR 425 (1092)
Q Consensus 348 ~g--IvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (1092)
+. |||||||-+||||..+|+.||||||.+....-+... .-.+.
T Consensus 163 ~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~--------~~e~~--------------------------- 207 (738)
T KOG1989|consen 163 LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTS--------AQEVN--------------------------- 207 (738)
T ss_pred CCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCcc--------HHHHH---------------------------
Confidence 98 999999999999999999999999987542210000 00000
Q ss_pred ccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc
Q 001366 426 WWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS 505 (1092)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~ 505 (1092)
..+ ..+ ...-|+-|+|||.+.
T Consensus 208 -------------------------------------------------------~ve---~eI-~k~TTp~YRsPEMID 228 (738)
T KOG1989|consen 208 -------------------------------------------------------YVE---EEI-EKYTTPQYRSPEMID 228 (738)
T ss_pred -------------------------------------------------------HHH---HHH-HhhCCccccChHHHh
Confidence 000 001 223478899999874
Q ss_pred ---CCCCCccccchhhhHHHHHHcC---CCCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHH
Q 001366 506 ---GGVCTTSSNIYSLGVLFFELFG---RFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579 (1092)
Q Consensus 506 ---~~~~t~~sDIwSLGvll~ell~---~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~ei 579 (1092)
+.+++.|+|||+|||+||-|+. ||+.... ..++....-.|.++..+..+.+||..||+++|+.||++.++
T Consensus 229 lysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv 304 (738)
T KOG1989|consen 229 LYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQV 304 (738)
T ss_pred hhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHH
Confidence 5788999999999999999984 5655422 23344444445567778999999999999999999999999
Q ss_pred hhhhh
Q 001366 580 LQSEV 584 (1092)
Q Consensus 580 L~~~~ 584 (1092)
+..-+
T Consensus 305 ~~~~~ 309 (738)
T KOG1989|consen 305 LEEIF 309 (738)
T ss_pred HHHHH
Confidence 98644
No 192
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.95 E-value=1e-27 Score=267.39 Aligned_cols=251 Identities=15% Similarity=0.093 Sum_probs=178.8
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccc-cccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFK-ERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+++.++ |.|.||+|...+... .....++.|+..............++..++....|||++..+.........+
T Consensus 6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~- 84 (280)
T cd05049 6 TIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI- 84 (280)
T ss_pred HhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE-
Confidence 455555554 789999997644211 2234556655533323323344455667788889999998766655433222
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcC-------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCC
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLK 356 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLK 356 (1092)
.+|+|++|++|.++|...+ ..++..++..++.||+.||.|||++||+|||||
T Consensus 85 ---------------lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlk 149 (280)
T cd05049 85 ---------------MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLA 149 (280)
T ss_pred ---------------EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccc
Confidence 3899999999999997643 246677889999999999999999999999999
Q ss_pred CCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCC
Q 001366 357 PSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGN 436 (1092)
Q Consensus 357 P~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (1092)
|+||+++.++.+|++|||+++........
T Consensus 150 p~nili~~~~~~kl~d~g~~~~~~~~~~~--------------------------------------------------- 178 (280)
T cd05049 150 TRNCLVGYDLVVKIGDFGMSRDVYTTDYY--------------------------------------------------- 178 (280)
T ss_pred cceEEEcCCCeEEECCcccceecccCcce---------------------------------------------------
Confidence 99999999999999999988654310000
Q ss_pred cccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccch
Q 001366 437 KIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIY 516 (1092)
Q Consensus 437 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIw 516 (1092)
..-....++..|+|||.+.+..++.++|||
T Consensus 179 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 208 (280)
T cd05049 179 --------------------------------------------------RVGGHTMLPIRWMPPESIMYRKFTTESDVW 208 (280)
T ss_pred --------------------------------------------------ecCCCCcccceecChhhhccCCcchhhhHH
Confidence 000022356779999999999999999999
Q ss_pred hhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 517 SLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 517 SLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
||||++|||++ + |..... ......+.....++.....+..+.+|+.+||.++|.+||++.|+++
T Consensus 209 slG~il~e~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 209 SFGVVLWEIFTYGKQPWYGLSN-EEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHHHHHHHHHhcCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999997 5 322222 1222222333333333456788999999999999999999999986
No 193
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.95 E-value=3.1e-28 Score=272.44 Aligned_cols=242 Identities=16% Similarity=0.163 Sum_probs=168.3
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchh-hHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.++.|.||++.... .+..++.|.......... .....++..++...+|||++.+++........+
T Consensus 10 ~g~~~~vy~~~~~~----~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~---------- 75 (284)
T cd07839 10 EGTYGTVFKAKNRE----THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLT---------- 75 (284)
T ss_pred ccCCeEEEEEEECC----CCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceE----------
Confidence 34678999987632 244445444322111111 122334566777889999998766544322222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.++||++| +|.+++...+..++...++.++.||+.||.|||++||+||||||+||+++.++.+|++|||+++.
T Consensus 76 ------lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~ 148 (284)
T cd07839 76 ------LVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARA 148 (284)
T ss_pred ------EEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhc
Confidence 37889875 89888876556688889999999999999999999999999999999999999999999998865
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+....
T Consensus 149 ~~~~~--------------------------------------------------------------------------- 153 (284)
T cd07839 149 FGIPV--------------------------------------------------------------------------- 153 (284)
T ss_pred cCCCC---------------------------------------------------------------------------
Confidence 33100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHcCC----CCcHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGR----FDSER 533 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell~~----f~~~~ 533 (1092)
.......++.+|+|||.+.+. .++.++|||||||++|||+++ |.+..
T Consensus 154 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~ 205 (284)
T cd07839 154 ----------------------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND 205 (284)
T ss_pred ----------------------------CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCC
Confidence 001133567889999998874 479999999999999999974 22222
Q ss_pred HHHHH---HHhc--------------cccC-CC---------CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 534 ALAAA---MSDL--------------RDRI-LP---------PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 534 ~~~~~---~~~~--------------~~~~-~p---------~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
..... +..+ .... .+ +.....++++.+|+.+||+.||.+|||+.+++.||||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 206 VDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred HHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 11111 1100 0000 00 1122356788999999999999999999999999997
No 194
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=1.1e-26 Score=256.71 Aligned_cols=279 Identities=22% Similarity=0.296 Sum_probs=231.2
Q ss_pred CCCCEEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEE
Q 001366 778 SANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLW 856 (1092)
Q Consensus 778 h~~~V~sl~fspdg~-~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IW 856 (1092)
-.+.|++++|+|... -+|+++ ...+.||+..+.. ........+..|.+++|..| |.+||+|+..|.|+|+
T Consensus 25 e~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~-------~~k~~srFk~~v~s~~fR~D-G~LlaaGD~sG~V~vf 95 (487)
T KOG0310|consen 25 EHNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRS-------VRKTFSRFKDVVYSVDFRSD-GRLLAAGDESGHVKVF 95 (487)
T ss_pred ccCcceeEecCCCCCCceEEec-ccEEEEEecchhh-------hhhhHHhhccceeEEEeecC-CeEEEccCCcCcEEEe
Confidence 346899999999654 355544 4579999876411 11112234678999999998 9999999999999999
Q ss_pred ECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECC
Q 001366 857 DACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSAD 935 (1092)
Q Consensus 857 D~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~D 935 (1092)
|..+...++.+.+|+.+|..+.|+|.++++|++|++|+.+++||+.+......+. |...|.|.+|+|...+++++|+.|
T Consensus 96 D~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYD 175 (487)
T KOG0310|consen 96 DMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYD 175 (487)
T ss_pred ccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCC
Confidence 9777678888999999999999999999999999999999999999988644555 678899999999988899999999
Q ss_pred CeEEEEEcCCCCcceEEecCCCCCeEEEEEcCC-CEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEE
Q 001366 936 YRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDS-GTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGL 1014 (1092)
Q Consensus 936 g~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~-~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~ 1014 (1092)
|.|++||+|.....+..+ .|..+|..|.|.++ ..+++++ .+.|+|||+-++ ++.+.....|...|+|+.+
T Consensus 176 g~vrl~DtR~~~~~v~el-nhg~pVe~vl~lpsgs~iasAg-Gn~vkVWDl~~G-------~qll~~~~~H~KtVTcL~l 246 (487)
T KOG0310|consen 176 GKVRLWDTRSLTSRVVEL-NHGCPVESVLALPSGSLIASAG-GNSVKVWDLTTG-------GQLLTSMFNHNKTVTCLRL 246 (487)
T ss_pred ceEEEEEeccCCceeEEe-cCCCceeeEEEcCCCCEEEEcC-CCeEEEEEecCC-------ceehhhhhcccceEEEEEe
Confidence 999999999875444444 69999999999865 5666655 668999999843 2344455569999999999
Q ss_pred ecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEE
Q 001366 1015 STADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVL 1089 (1092)
Q Consensus 1015 spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW 1089 (1092)
..++..|++||-|+.|+||++.+-+.+.+.++ .++|.+++.+|+++.++.|.+||.+-+-
T Consensus 247 ~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~---------------~~pvLsiavs~dd~t~viGmsnGlv~~r 306 (487)
T KOG0310|consen 247 ASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKY---------------PGPVLSIAVSPDDQTVVIGMSNGLVSIR 306 (487)
T ss_pred ecCCceEeecccccceEEEEccceEEEEeeec---------------ccceeeEEecCCCceEEEecccceeeee
Confidence 99999999999999999999888888887776 5689999999999999999999988653
No 195
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.95 E-value=2.7e-28 Score=279.89 Aligned_cols=246 Identities=13% Similarity=0.069 Sum_probs=175.3
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++.... .+..++.|+...... .........+..++....|++++.+......+...+
T Consensus 11 ~G~fg~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~--------- 77 (331)
T cd05624 11 RGAFGEVAVVKMKH----TERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLY--------- 77 (331)
T ss_pred eCCCeEEEEEEECC----CCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE---------
Confidence 34789999987532 234455554421111 111111233445566778999888766554333333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++|||+.||+|.++|......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus 78 -------lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~ 150 (331)
T cd05624 78 -------LVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCL 150 (331)
T ss_pred -------EEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEecccee
Confidence 3899999999999998755567888999999999999999999999999999999999999999999999987
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.......
T Consensus 151 ~~~~~~~------------------------------------------------------------------------- 157 (331)
T cd05624 151 KMNQDGT------------------------------------------------------------------------- 157 (331)
T ss_pred eccCCCc-------------------------------------------------------------------------
Confidence 6431000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-----CCCCccccchhhhHHHHHHcCC---C
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----GVCTTSSNIYSLGVLFFELFGR---F 529 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----~~~t~~sDIwSLGvll~ell~~---f 529 (1092)
......+||+.|+|||++.+ +.++.++|||||||+||||++| |
T Consensus 158 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf 208 (331)
T cd05624 158 -----------------------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 208 (331)
T ss_pred -----------------------------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCc
Confidence 00013468999999999876 4688999999999999999986 4
Q ss_pred CcHHHHHHHHHhccc---cCCCCCCCCCChhHHHHHHhccccCCCC--CCCHHHHhhhhhhhh
Q 001366 530 DSERALAAAMSDLRD---RILPPSFLSENPKEAGFCLWQLHPEPLS--RPTTREILQSEVTNE 587 (1092)
Q Consensus 530 ~~~~~~~~~~~~~~~---~~~p~~~~~~~~~~~~li~~lL~~dP~~--Rpsa~eiL~~~~~~~ 587 (1092)
............... ..+|+.....++.+.+|+.+||+.++.+ |++++++++|+||..
T Consensus 209 ~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~ 271 (331)
T cd05624 209 YAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 271 (331)
T ss_pred cCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence 333322222222221 2244555566888999999999876654 468999999999975
No 196
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.95 E-value=1.4e-26 Score=242.26 Aligned_cols=249 Identities=18% Similarity=0.270 Sum_probs=207.3
Q ss_pred eeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCC-ceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEe
Q 001366 822 AVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG-QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900 (1092)
Q Consensus 822 ~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg-~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWD 900 (1092)
....+|++.|.++.|+|+ +.+||||+.|..|.+|++... +-...+++|.+.|..+.|.+ +++.++|+|.|.+|+.||
T Consensus 41 m~l~gh~geI~~~~F~P~-gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~-d~s~i~S~gtDk~v~~wD 118 (338)
T KOG0265|consen 41 MLLPGHKGEIYTIKFHPD-GSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMR-DGSHILSCGTDKTVRGWD 118 (338)
T ss_pred hhcCCCcceEEEEEECCC-CCeEeecCCcceEEEEeccccccceeeeccccceeEeeeecc-CCCEEEEecCCceEEEEe
Confidence 345689999999999997 999999999999999996533 45667889999999999999 999999999999999999
Q ss_pred cCCCceeeeEec-CCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCC
Q 001366 901 INEKNSLATIKN-IANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDN 978 (1092)
Q Consensus 901 l~~~~~l~~l~~-~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg 978 (1092)
+++|+++..++. ..-|+++.-+.-|..++.+|+.|+++++||+|+... +.++. .+..++++.|. .+..+++|+-|+
T Consensus 119 ~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~-~~t~~-~kyqltAv~f~d~s~qv~sggIdn 196 (338)
T KOG0265|consen 119 AETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEA-IKTFE-NKYQLTAVGFKDTSDQVISGGIDN 196 (338)
T ss_pred cccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccch-hhccc-cceeEEEEEecccccceeeccccC
Confidence 999999998884 556777876656778999999999999999997543 34443 35679999998 677899999999
Q ss_pred eEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceee-eeccccCCCCCccc
Q 001366 979 KLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITS-YKFGSIDPISGKET 1057 (1092)
Q Consensus 979 ~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~-~~~~~~~~i~~~~~ 1057 (1092)
.|++||++ .+...+++.||...|+.+..+++|.++.+-+.|+++++||+..-.+-.. +. ...+
T Consensus 197 ~ikvWd~r--------~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~-----if~g--- 260 (338)
T KOG0265|consen 197 DIKVWDLR--------KNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVK-----IFQG--- 260 (338)
T ss_pred ceeeeccc--------cCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEE-----Eeec---
Confidence 99999999 4567899999999999999999999999999999999999764332221 10 0001
Q ss_pred cCCCC--CCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1058 DDDNG--LFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1058 ~~~h~--~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
..|+ .....++|+|++..+.+|+.|..|++|+-
T Consensus 261 -~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~ 295 (338)
T KOG0265|consen 261 -HIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDT 295 (338)
T ss_pred -chhhhhhhcceeeccCCCCccccccccceEEEeec
Confidence 1122 23577899999999999999999999984
No 197
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.95 E-value=2.5e-26 Score=273.51 Aligned_cols=273 Identities=20% Similarity=0.349 Sum_probs=237.1
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCccccccee-eecCCCCeEEEEEecCCCCEEEEEECCCcEEE
Q 001366 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAV-EMSNRSKLSCVCWNNYIKNYLASADYDGVVKL 855 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~-~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~I 855 (1092)
.+...+.+..|+ +.++++++.|.+|++|+... ...... ..+|.+.|.++++.. .+..|++||.|.++++
T Consensus 206 ~~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~-------~~~i~~~l~GH~g~V~~l~~~~-~~~~lvsgS~D~t~rv 275 (537)
T KOG0274|consen 206 TDDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNN-------GYLILTRLVGHFGGVWGLAFPS-GGDKLVSGSTDKTERV 275 (537)
T ss_pred cCcchhhhheee--cCeEEecCCCceeEEeeccc-------ceEEEeeccCCCCCceeEEEec-CCCEEEEEecCCcEEe
Confidence 356677888888 66899999999999999765 222233 678999999999986 4789999999999999
Q ss_pred EECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEEC
Q 001366 856 WDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSA 934 (1092)
Q Consensus 856 WD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~ 934 (1092)
||+.+|+|...+.+|...|.++...+ ..+++||.|.+|++|++.++.++.++. |.+.|+++..+ + .++++|+.
T Consensus 276 Wd~~sg~C~~~l~gh~stv~~~~~~~---~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~-~~lvsgs~ 349 (537)
T KOG0274|consen 276 WDCSTGECTHSLQGHTSSVRCLTIDP---FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--E-PLLVSGSY 349 (537)
T ss_pred EecCCCcEEEEecCCCceEEEEEccC---ceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--C-CEEEEEec
Confidence 99999999999999999999998865 678999999999999999999999999 89999999998 3 48999999
Q ss_pred CCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCC-ceeEEEcCCCCCeEEEE
Q 001366 935 DYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTN-ACSLTFSGHTNEKNFVG 1013 (1092)
Q Consensus 935 Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~-~~~~~l~~h~~~V~~v~ 1013 (1092)
|++|++||+++.+ .+.++.+|...|.++.+.....+++|+.|++|++||+++ . .|+.++.+|..-++.+.
T Consensus 350 d~~v~VW~~~~~~-cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~--------~~~c~~tl~~h~~~v~~l~ 420 (537)
T KOG0274|consen 350 DGTVKVWDPRTGK-CLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRT--------KRKCIHTLQGHTSLVSSLL 420 (537)
T ss_pred CceEEEEEhhhce-eeeeecCCcceEEEEEecCcceEEeeeeccceEeecCCc--------hhhhhhhhcCCcccccccc
Confidence 9999999999765 678999999999999876438999999999999999993 4 78999999999885554
Q ss_pred EecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1014 LSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1014 ~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
+ .+.+|++++.|++|++||...++.+....- .|...|+.+++. ...+++++.||.+++|++
T Consensus 421 ~--~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~-------------~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl 481 (537)
T KOG0274|consen 421 L--RDNFLVSSSADGTIKLWDAEEGECLRTLEG-------------RHVGGVSALALG--KEEILCSSDDGSVKLWDL 481 (537)
T ss_pred c--ccceeEeccccccEEEeecccCceeeeecc-------------CCcccEEEeecC--cceEEEEecCCeeEEEec
Confidence 4 466999999999999999999988876641 145678888877 568889999999999986
No 198
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.95 E-value=3.5e-28 Score=276.06 Aligned_cols=243 Identities=19% Similarity=0.173 Sum_probs=174.1
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.++.|.||++.... .+..++.|+..............++...+....|||++.+......+...+
T Consensus 11 ~G~~g~v~~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~----------- 75 (308)
T cd06615 11 AGNGGVVTKVLHRP----SGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEIS----------- 75 (308)
T ss_pred CCCCeEEEEEEEcC----CCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEE-----------
Confidence 44789999987522 233444443322212222333456667788889999998876655433333
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhh-cCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs-~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+|||++|++|.++++..+ .++...+..++.||+.||+|||+ +||+||||||+||+++.++.+|++|||+++.
T Consensus 76 -----lv~ey~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 149 (308)
T cd06615 76 -----ICMEHMDGGSLDQVLKKAG-RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 149 (308)
T ss_pred -----EEeeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccc
Confidence 3899999999999997764 46777899999999999999997 6999999999999999999999999998754
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.....
T Consensus 150 ~~~~~--------------------------------------------------------------------------- 154 (308)
T cd06615 150 LIDSM--------------------------------------------------------------------------- 154 (308)
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 32100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
....+|+..|+|||.+.+..++.++|||||||++|||+++ |......
T Consensus 155 ------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~ 204 (308)
T cd06615 155 ------------------------------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK 204 (308)
T ss_pred ------------------------------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh
Confidence 0134678889999999888899999999999999999986 3222111
Q ss_pred --HHHHHhccc--------------------------------cCCCCCCC--CCChhHHHHHHhccccCCCCCCCHHHH
Q 001366 536 --AAAMSDLRD--------------------------------RILPPSFL--SENPKEAGFCLWQLHPEPLSRPTTREI 579 (1092)
Q Consensus 536 --~~~~~~~~~--------------------------------~~~p~~~~--~~~~~~~~li~~lL~~dP~~Rpsa~ei 579 (1092)
...+..... ...+|..+ ..++++++|+.+||.++|++||++.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~l 284 (308)
T cd06615 205 ELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKEL 284 (308)
T ss_pred hHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 111100000 00011111 246778999999999999999999999
Q ss_pred hhhhhhhhh
Q 001366 580 LQSEVTNEF 588 (1092)
Q Consensus 580 L~~~~~~~~ 588 (1092)
++||||...
T Consensus 285 l~~~~~~~~ 293 (308)
T cd06615 285 TKHPFIKRA 293 (308)
T ss_pred hcChhhhhc
Confidence 999999763
No 199
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6.8e-29 Score=282.53 Aligned_cols=244 Identities=17% Similarity=0.149 Sum_probs=184.1
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+-.|+||.|+.-+ ++.++++|-..-.+...-+ -.-.+.+|-...+|.||+..+....-++..
T Consensus 586 GTYG~VYA~RD~~----tqvrIaIKEIpekdsr~~Q-PLhEEIaLH~~LrHkNIVrYLGs~senGf~------------- 647 (1226)
T KOG4279|consen 586 GTYGTVYAARDMD----TQVRIAIKEIPEKDSREVQ-PLHEEIALHSTLRHKNIVRYLGSVSENGFF------------- 647 (1226)
T ss_pred CceeEEEeecccc----ceeEEEeeecccccchhhc-cHHHHHHHHHHHhhHhHHHHhhccCCCCeE-------------
Confidence 3469999999844 4555555333222211111 123345666778999999755443333322
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCC--CHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc-cCCcEEEecccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKG--KRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL-QSNQVKYIGPIIQK 377 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~--~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~-~~~~vkl~Dfg~~~ 377 (1092)
.+.||..+||+|..+|+..=.++ ++..+-.+-+||++||.|||.+.|||||||-+|+|+. -+|.+||.|||.++
T Consensus 648 ---kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsK 724 (1226)
T KOG4279|consen 648 ---KIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSK 724 (1226)
T ss_pred ---EEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccch
Confidence 24799999999999997754444 7777888999999999999999999999999999996 68999999999998
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+.. + |+
T Consensus 725 RLAg---------------------------------------------------------------------i----nP 731 (1226)
T KOG4279|consen 725 RLAG---------------------------------------------------------------------I----NP 731 (1226)
T ss_pred hhcc---------------------------------------------------------------------C----Cc
Confidence 7661 0 00
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC--CCccccchhhhHHHHHHcCCCCcH---
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV--CTTSSNIYSLGVLFFELFGRFDSE--- 532 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~--~t~~sDIwSLGvll~ell~~f~~~--- 532 (1092)
.. .++.||..|||||++..++ |+.++|||||||++.||.||-+++
T Consensus 732 ~T------------------------------ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~El 781 (1226)
T KOG4279|consen 732 CT------------------------------ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVEL 781 (1226)
T ss_pred cc------------------------------cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeec
Confidence 01 1567999999999998854 899999999999999999974443
Q ss_pred -HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 533 -RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 533 -~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
+...+..+.-.-..-||...+.+.+...||++|+.++|.+||+|.++|+.||+...
T Consensus 782 gspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 782 GSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred CChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 34444444444556677777778999999999999999999999999999999865
No 200
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.95 E-value=9.7e-28 Score=268.84 Aligned_cols=252 Identities=17% Similarity=0.130 Sum_probs=180.4
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ ++.|+||++... ..+..++.|...............++...+...+|||++..+.....+...+
T Consensus 3 ~~~~~~ig~g~~g~v~~~~~~----~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~--- 75 (286)
T cd06622 3 IEVLDELGKGNYGSVYKVLHR----PTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVY--- 75 (286)
T ss_pred hhhhhhhcccCCeEEEEEEEc----CCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEE---
Confidence 3444443 468999999763 2245555654422222222344445666778889999998766544322222
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHhhh-cCccccCCCCCCeEEccCCcE
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNAR--GHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~--~~~~~~~~~~~i~~qil~~l~~lHs-~gIvHrDLKP~Nill~~~~~v 368 (1092)
.+|||++|++|.+++... ...+++..++.++.||+.||.|||+ .||+||||||+||+++.++.+
T Consensus 76 -------------lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~ 142 (286)
T cd06622 76 -------------MCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQV 142 (286)
T ss_pred -------------EEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCE
Confidence 379999999999998764 2357888999999999999999997 599999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
|++|||+++......
T Consensus 143 ~l~dfg~~~~~~~~~----------------------------------------------------------------- 157 (286)
T cd06622 143 KLCDFGVSGNLVASL----------------------------------------------------------------- 157 (286)
T ss_pred EEeecCCcccccCCc-----------------------------------------------------------------
Confidence 999999876532100
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC------CCCccccchhhhHHH
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG------VCTTSSNIYSLGVLF 522 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~------~~t~~sDIwSLGvll 522 (1092)
.....|++.|+|||.+.+. .++.++|||||||+|
T Consensus 158 ----------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il 197 (286)
T cd06622 158 ----------------------------------------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSI 197 (286)
T ss_pred ----------------------------------------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHH
Confidence 0023467789999998653 358899999999999
Q ss_pred HHHcCC---CCcHHH--HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 523 FELFGR---FDSERA--LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 523 ~ell~~---f~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
|||+++ |..... ....+..+.....+......++.+.+|+.+||+++|++||++.+++.||||.....
T Consensus 198 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~ 270 (286)
T cd06622 198 LEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKN 270 (286)
T ss_pred HHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccC
Confidence 999986 332211 12222223333333344456788999999999999999999999999999977543
No 201
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.95 E-value=7.3e-28 Score=269.55 Aligned_cols=245 Identities=18% Similarity=0.171 Sum_probs=172.8
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|+||+|.....-...+..++.|...............++..+++...|||++.++.........+
T Consensus 15 ~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~----------- 83 (283)
T cd05090 15 ECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC----------- 83 (283)
T ss_pred ccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE-----------
Confidence 347899999874110011123334433332222222233345667888899999998765544332222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcC----------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARG----------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL 363 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~----------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~ 363 (1092)
.+|||+.+++|.++|.... ..++..+++.++.||+.||.|||++||+||||||+||+++
T Consensus 84 -----lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~ 158 (283)
T cd05090 84 -----MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG 158 (283)
T ss_pred -----EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc
Confidence 3899999999999995332 2366778899999999999999999999999999999999
Q ss_pred cCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCc
Q 001366 364 QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANE 443 (1092)
Q Consensus 364 ~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1092)
.++.+|++|||+++........
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~---------------------------------------------------------- 180 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYY---------------------------------------------------------- 180 (283)
T ss_pred CCCcEEeccccccccccCCcce----------------------------------------------------------
Confidence 9999999999988764310000
Q ss_pred cccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHH
Q 001366 444 SDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFF 523 (1092)
Q Consensus 444 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ 523 (1092)
.......++..|+|||.+.+..++.++|||||||+||
T Consensus 181 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ 217 (283)
T cd05090 181 -------------------------------------------RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLW 217 (283)
T ss_pred -------------------------------------------ecccCCCccceecChHHhccCCCCchhhhHHHHHHHH
Confidence 0001233466799999999888999999999999999
Q ss_pred HHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 524 ELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 524 ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
||++ + |.+... ...+..+.....++.....++.+.+|+.+||+++|.+||++.+|+++
T Consensus 218 el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 218 EIFSFGLQPYYGFSN-QEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 9997 4 433322 23333444444444445567889999999999999999999999875
No 202
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.95 E-value=8.2e-28 Score=268.55 Aligned_cols=253 Identities=15% Similarity=0.145 Sum_probs=183.0
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
+-.|.+.+.++ +.|.||++.... .+..++.|+..... ........++..++...+|||++.+.+....+...+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~----~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKE----TGLFAAAKIIQIES-EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLW 78 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcC----CCcEEEEEEEeeCC-HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEE
Confidence 34577766664 689999998632 23445555442211 112223334556778888999998877655433333
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
++|||++|++|.+++...+..++..+++.++.|++.||.|||++||+|+||||+||+++.++.+
T Consensus 79 ----------------lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~ 142 (280)
T cd06611 79 ----------------ILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDV 142 (280)
T ss_pred ----------------EEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCE
Confidence 3899999999999998776678888999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
+++|||++.......
T Consensus 143 ~l~d~g~~~~~~~~~----------------------------------------------------------------- 157 (280)
T cd06611 143 KLADFGVSAKNKSTL----------------------------------------------------------------- 157 (280)
T ss_pred EEccCccchhhcccc-----------------------------------------------------------------
Confidence 999999775532100
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc-----CCCCCccccchhhhHHHH
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS-----GGVCTTSSNIYSLGVLFF 523 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-----~~~~t~~sDIwSLGvll~ 523 (1092)
.......||..|+|||.+. +..++.++|||||||++|
T Consensus 158 --------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~ 199 (280)
T cd06611 158 --------------------------------------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLI 199 (280)
T ss_pred --------------------------------------cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHH
Confidence 0001345788899999985 345788999999999999
Q ss_pred HHcCC---CCcHHHHHHHHHhccccCCC--CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 524 ELFGR---FDSERALAAAMSDLRDRILP--PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 524 ell~~---f~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
||+++ |.......... .+.....| ......+..+.+|+..||+.+|.+||++.++|+||||...
T Consensus 200 ~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 200 ELAQMEPPHHELNPMRVLL-KILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred HHHhCCCCcccCCHHHHHH-HHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 99986 33322222222 22221111 1122346788999999999999999999999999999764
No 203
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.95 E-value=6.6e-28 Score=266.91 Aligned_cols=246 Identities=17% Similarity=0.136 Sum_probs=175.3
Q ss_pred cccceeeeCCCCCccccccccccccccc-cccCc----hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCC
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFV-TTTMP----SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
++.|.||+|...+ ++.++.|+.. ..... .......++...+...+|+|++........+...+
T Consensus 11 g~~~~v~~~~~~~-----~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~------- 78 (265)
T cd06631 11 GAYGTVYCGLTNQ-----GQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTIS------- 78 (265)
T ss_pred cCCeEEEEEEEcC-----CCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEE-------
Confidence 4678999986532 4444554332 11111 11122334455677788999987666544332222
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
.+|||+.|++|.+++.+.+ .++...+..++.||+.||+|||++||+|+||||+||+++.++.+|++|||+
T Consensus 79 ---------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~ 148 (265)
T cd06631 79 ---------IFMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGC 148 (265)
T ss_pred ---------EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchh
Confidence 3799999999999997765 456778899999999999999999999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++.........
T Consensus 149 ~~~~~~~~~~~--------------------------------------------------------------------- 159 (265)
T cd06631 149 ARRLAWVGLHG--------------------------------------------------------------------- 159 (265)
T ss_pred hHhhhhccccc---------------------------------------------------------------------
Confidence 87643100000
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcH
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
..........|+..|+|||.+.+..++.++|+|||||++|||+++ |...
T Consensus 160 ----------------------------~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~ 211 (265)
T cd06631 160 ----------------------------THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASM 211 (265)
T ss_pred ----------------------------cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccC
Confidence 000001134688899999999998899999999999999999996 4332
Q ss_pred HHHHHHHHhccc-cCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 533 RALAAAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 533 ~~~~~~~~~~~~-~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
............ ...|+.....++.+.+|+.+||+++|.+||++.++|+||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 212 DRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred ChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 222222222222 23344444567888999999999999999999999999997
No 204
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.95 E-value=1.5e-26 Score=264.14 Aligned_cols=276 Identities=18% Similarity=0.298 Sum_probs=232.7
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccc-eeeecCCCCeEE-EEEecCCCCEEEEEECCC
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYP-AVEMSNRSKLSC-VCWNNYIKNYLASADYDG 851 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~-~~~~~h~~~V~~-v~~sp~~~~~LaSgs~Dg 851 (1092)
.+.+|...|+.+++.+. ..++++|.|+++++|+-... .+.. ....+|.+-|.+ +++.+..+..|++|+.|+
T Consensus 9 ~l~gH~~DVr~v~~~~~-~~i~s~sRd~t~~vw~~~~~------~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~ 81 (745)
T KOG0301|consen 9 ELEGHKSDVRAVAVTDG-VCIISGSRDGTVKVWAKKGK------QYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDT 81 (745)
T ss_pred EeccCccchheeEecCC-eEEeecCCCCceeeeeccCc------ccccceecccCcceeeccceeccccCcceEeecccc
Confidence 46799999999988754 48999999999999986431 2222 234457777777 888765466799999999
Q ss_pred cEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEE
Q 001366 852 VVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLA 930 (1092)
Q Consensus 852 tV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~la 930 (1092)
+|.+|......++.++.+|...|+|++... ++. ++|||+|.++++|-+. ++...+. |.+.|+++++-|.+ .++
T Consensus 82 ~i~v~~~~~~~P~~~LkgH~snVC~ls~~~-~~~-~iSgSWD~TakvW~~~--~l~~~l~gH~asVWAv~~l~e~--~~v 155 (745)
T KOG0301|consen 82 TIIVFKLSQAEPLYTLKGHKSNVCSLSIGE-DGT-LISGSWDSTAKVWRIG--ELVYSLQGHTASVWAVASLPEN--TYV 155 (745)
T ss_pred eEEEEecCCCCchhhhhccccceeeeecCC-cCc-eEecccccceEEecch--hhhcccCCcchheeeeeecCCC--cEE
Confidence 999999999999999999999999999776 555 9999999999999764 4555565 78899999999987 799
Q ss_pred EEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeE
Q 001366 931 FGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKN 1010 (1092)
Q Consensus 931 tgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~ 1010 (1092)
||+.|.+|++|.- ...+.++.+|...|+.+++.++..|+|++.||.|++|++. +.++.++.+|++-|+
T Consensus 156 TgsaDKtIklWk~---~~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~~---------ge~l~~~~ghtn~vY 223 (745)
T KOG0301|consen 156 TGSADKTIKLWKG---GTLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDLD---------GEVLLEMHGHTNFVY 223 (745)
T ss_pred eccCcceeeeccC---CchhhhhccchhheeeeEEecCCCeEeecCCceEEEEecc---------CceeeeeeccceEEE
Confidence 9999999999975 3457899999999999999999999999999999999995 678999999999999
Q ss_pred EEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1011 FVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1011 ~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
+++...+++.|+|+++|++++||+.. ..++.+.. .+..||++++-++|. +++|++||.||||-
T Consensus 224 sis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~l--------------PttsiWsa~~L~NgD-Ivvg~SDG~VrVfT 286 (745)
T KOG0301|consen 224 SISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITL--------------PTTSIWSAKVLLNGD-IVVGGSDGRVRVFT 286 (745)
T ss_pred EEEecCCCCeEEEecCCceEEEeecC--ceEEEEec--------------CccceEEEEEeeCCC-EEEeccCceEEEEE
Confidence 99988889999999999999999876 45554432 234699999999988 56888899999995
Q ss_pred c
Q 001366 1091 M 1091 (1092)
Q Consensus 1091 l 1091 (1092)
.
T Consensus 287 ~ 287 (745)
T KOG0301|consen 287 V 287 (745)
T ss_pred e
Confidence 3
No 205
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=3.3e-25 Score=234.61 Aligned_cols=281 Identities=18% Similarity=0.274 Sum_probs=228.3
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEEC--CCc
Q 001366 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADY--DGV 852 (1092)
Q Consensus 775 l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~--Dgt 852 (1092)
+..-...|+++.|+++|.++++++.|.+++|||.... ........++-.|..++|... ...++.++. |.+
T Consensus 10 f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g-------~~~~ti~skkyG~~~~~Fth~-~~~~i~sStk~d~t 81 (311)
T KOG1446|consen 10 FRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSG-------KQVKTINSKKYGVDLACFTHH-SNTVIHSSTKEDDT 81 (311)
T ss_pred cccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCC-------ceeeEeecccccccEEEEecC-CceEEEccCCCCCc
Confidence 3345678999999999999999999999999998752 222233344567788888665 455555665 899
Q ss_pred EEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEE
Q 001366 853 VKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFG 932 (1092)
Q Consensus 853 V~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latg 932 (1092)
||.-++.+.+.++.|.||.+.|.+++.+| -+..++|+|.|++|++||++..+|...+..... ..++|+|.| .++|++
T Consensus 82 IryLsl~dNkylRYF~GH~~~V~sL~~sP-~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~-pi~AfDp~G-LifA~~ 158 (311)
T KOG1446|consen 82 IRYLSLHDNKYLRYFPGHKKRVNSLSVSP-KDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR-PIAAFDPEG-LIFALA 158 (311)
T ss_pred eEEEEeecCceEEEcCCCCceEEEEEecC-CCCeEEecccCCeEEeeEecCCCCceEEecCCC-cceeECCCC-cEEEEe
Confidence 99999999999999999999999999999 558999999999999999999888877765433 357999999 488888
Q ss_pred ECCCeEEEEEcCCC-CcceEEec---CCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCC
Q 001366 933 SADYRTYCYDLRNA-RAPWCVLA---GHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTN 1007 (1092)
Q Consensus 933 s~Dg~I~vwDlr~~-~~~~~~l~---~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~ 1007 (1092)
.....|++||+|+. +-|..++. +.....+.|.|+ +|++|+.+...+.+.+.|.- .+....++.++.+
T Consensus 159 ~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf--------~G~~~~tfs~~~~ 230 (311)
T KOG1446|consen 159 NGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAF--------DGTVKSTFSGYPN 230 (311)
T ss_pred cCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEcc--------CCcEeeeEeeccC
Confidence 88889999999986 34555543 346678999999 77888889999999999987 4556777777766
Q ss_pred Ce---EEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCC
Q 001366 1008 EK---NFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSG 1084 (1092)
Q Consensus 1008 ~V---~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG 1084 (1092)
.- -..+|+||+++|++|+.||+|.+|+..++..+...+ ..+..++.++.|+|.-.+++|+++
T Consensus 231 ~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~-------------~~~~~~~~~~~fnP~~~mf~sa~s-- 295 (311)
T KOG1446|consen 231 AGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLR-------------GPNGGPVSCVRFNPRYAMFVSASS-- 295 (311)
T ss_pred CCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEec-------------CCCCCCccccccCCceeeeeecCc--
Confidence 54 467899999999999999999999999998887664 225778999999999999988874
Q ss_pred eEEEE
Q 001366 1085 CIKVL 1089 (1092)
Q Consensus 1085 ~V~vW 1089 (1092)
.+-+|
T Consensus 296 ~l~fw 300 (311)
T KOG1446|consen 296 NLVFW 300 (311)
T ss_pred eEEEE
Confidence 45555
No 206
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.95 E-value=1.1e-27 Score=267.87 Aligned_cols=255 Identities=19% Similarity=0.173 Sum_probs=177.0
Q ss_pred CchhHHHhhhcc--ccceeeeCCCCCccc-cccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 210 GFSEFFVKTTLK--GKGIVCRGPPLNAFK-ERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 210 ~f~~~~~~~~~~--g~Gvv~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
+++.|.+...++ |.|+||+|...+... ..+..++.|+..............++..++....|||++.++........
T Consensus 3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP 82 (283)
T ss_pred CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc
Confidence 345666666664 689999997643211 11334455554322211112233345566677899999987665443322
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHHHHhhhcCcc
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---------------GHKGKRIECLYIFRQIVALVDYHHTQGVT 351 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~---------------~~~~~~~~~~~i~~qil~~l~~lHs~gIv 351 (1092)
.. ..++|+.+++|.+++... ...++...++.++.|++.||+|+|++||+
T Consensus 83 ~~----------------~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~ 146 (283)
T cd05091 83 LS----------------MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVV 146 (283)
T ss_pred eE----------------EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 22 268999999999998532 12366778899999999999999999999
Q ss_pred ccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCccccccccccc
Q 001366 352 FLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFP 431 (1092)
Q Consensus 352 HrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (1092)
||||||+||++..++.+|++|||+++.......
T Consensus 147 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 179 (283)
T cd05091 147 HKDLATRNVLVFDKLNVKISDLGLFREVYAADY----------------------------------------------- 179 (283)
T ss_pred ccccchhheEecCCCceEecccccccccccchh-----------------------------------------------
Confidence 999999999999999999999998876431000
Q ss_pred CccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCc
Q 001366 432 SKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTT 511 (1092)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~ 511 (1092)
........+++.|+|||.+.++.++.
T Consensus 180 ------------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~ 205 (283)
T cd05091 180 ------------------------------------------------------YKLMGNSLLPIRWMSPEAIMYGKFSI 205 (283)
T ss_pred ------------------------------------------------------eeeccCccCCccccCHHHHhcCCCCc
Confidence 00001234567899999998888999
Q ss_pred cccchhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 512 SSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 512 ~sDIwSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
++|||||||++|||++ + |...... .....+.....++.....++.+.+|+..||+++|.+||++++|+..
T Consensus 206 ~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 206 DSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred chhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 9999999999999997 3 3332222 2233333333333334556778899999999999999999999874
No 207
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.95 E-value=1.1e-27 Score=272.60 Aligned_cols=277 Identities=15% Similarity=0.124 Sum_probs=186.3
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCch--hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS--DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++...+ .+..++.|......... .......+...+....||+++.++.....+...+
T Consensus 11 ~g~~g~vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~--------- 77 (316)
T cd05574 11 KGDVGRVFLVRLKG----TGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLC--------- 77 (316)
T ss_pred CCccEEEEEEEEcC----CCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEE---------
Confidence 35779999998743 24445555543332221 2233444556777888999998765544322222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
++|||+.|++|.+++... +..+++..++.++.||+.||+|||++||+|+||||+||+++.++.++++|||++
T Consensus 78 -------lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~ 150 (316)
T cd05574 78 -------LVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLS 150 (316)
T ss_pred -------EEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchh
Confidence 389999999999999753 356788899999999999999999999999999999999999999999999998
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
........... .... ..+..+...+...
T Consensus 151 ~~~~~~~~~~~---~~~~-----------------------------------~~~~~~~~~~~~~-------------- 178 (316)
T cd05574 151 KQSDVEPPPVS---KALR-----------------------------------KGSRRSSVNSIPS-------------- 178 (316)
T ss_pred hcccccccccc---cccc-----------------------------------cccccccccccch--------------
Confidence 76542110000 0000 0000000000000
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
..............+||..|+|||.+.+..++.++|||||||++|+|+++ |....
T Consensus 179 ----------------------~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 179 ----------------------ETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ----------------------hhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 00000011112256899999999999998899999999999999999986 43333
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC----HHHHhhhhhhhhhhc
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT----TREILQSEVTNEFQE 590 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps----a~eiL~~~~~~~~~~ 590 (1092)
...............+.....++.+.+|+.+||+.+|.+||+ +.++|+||||+...-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~ 297 (316)
T cd05574 237 RDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNW 297 (316)
T ss_pred hHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCCh
Confidence 333333333322223333335788999999999999999999 999999999987643
No 208
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.95 E-value=6.9e-28 Score=265.17 Aligned_cols=242 Identities=18% Similarity=0.178 Sum_probs=172.5
Q ss_pred cccceeeeCCCCCcccccccccccccccc-ccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVT-TTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
++.|.||++.... .+..++.|.... ............+...+...+|||++.+......... ..+
T Consensus 11 g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--------~~~-- 76 (257)
T cd08223 11 GSYGEVSLVRHRT----DGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDG--------LLY-- 76 (257)
T ss_pred CCCeEEEEEEEcC----CCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCC--------EEE--
Confidence 3678888777522 123333333211 1111222234445566778889998875443211110 011
Q ss_pred ccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+|||+.|++|.+++... +..++..+++.++.||+.||+|||++||+||||||+||+++.++.++++|||+++.
T Consensus 77 -----lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~ 151 (257)
T cd08223 77 -----IVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARV 151 (257)
T ss_pred -----EEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEE
Confidence 379999999999999763 44578889999999999999999999999999999999999999999999998865
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.....
T Consensus 152 ~~~~~--------------------------------------------------------------------------- 156 (257)
T cd08223 152 LENQC--------------------------------------------------------------------------- 156 (257)
T ss_pred ecccC---------------------------------------------------------------------------
Confidence 43100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
.......|++.|+|||.+.+..++.++|||||||++|||+++ |......
T Consensus 157 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~ 208 (257)
T cd08223 157 ----------------------------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN 208 (257)
T ss_pred ----------------------------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH
Confidence 000134578889999999998899999999999999999986 4433322
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
.... .+....+++.....++.+.+|+.+||.++|.+||++.++++||||
T Consensus 209 ~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 209 SLVY-RIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHH-HHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 2222 222233333334567889999999999999999999999999997
No 209
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.95 E-value=8.9e-28 Score=268.67 Aligned_cols=244 Identities=17% Similarity=0.209 Sum_probs=175.1
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.++.|.||++.... .+..++.|+...... ........++..++...+|||++.++.........+
T Consensus 10 ~g~~~~v~~~~~~~----~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~---------- 75 (286)
T cd07832 10 EGAHGIVFKAKDRE----TGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFV---------- 75 (286)
T ss_pred cCCCcEEEEEEECC----CCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeE----------
Confidence 35789999987522 244555555433222 222233445556677778999998776654322222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+|+|+ |++|.+++......++..+++.++.||+.+|.|||++||+|+||||+||+++.++.++++|||++..
T Consensus 76 ------~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~ 148 (286)
T cd07832 76 ------LVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARL 148 (286)
T ss_pred ------EEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeeccc
Confidence 379999 9999999977666788889999999999999999999999999999999999999999999998866
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.....
T Consensus 149 ~~~~~--------------------------------------------------------------------------- 153 (286)
T cd07832 149 FSEEE--------------------------------------------------------------------------- 153 (286)
T ss_pred ccCCC---------------------------------------------------------------------------
Confidence 43100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
........|+.+|+|||.+.+. .++.++|||||||++|||+++ |.+..+
T Consensus 154 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~ 206 (286)
T cd07832 154 ---------------------------PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND 206 (286)
T ss_pred ---------------------------CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH
Confidence 0011134688999999998764 468999999999999999986 333322
Q ss_pred HHHHHHhccc---c-----------------CC--------CCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001366 535 LAAAMSDLRD---R-----------------IL--------PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1092)
Q Consensus 535 ~~~~~~~~~~---~-----------------~~--------p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~ 586 (1092)
.......+.. . .. ...+...+..+.+|+.+||.++|.+||+++++|.||||.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 207 IEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred HHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 2221111110 0 00 011234457788999999999999999999999999984
No 210
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.95 E-value=7.5e-28 Score=270.14 Aligned_cols=245 Identities=16% Similarity=0.183 Sum_probs=178.6
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchh--hHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD--AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
..+|.|.||++.... .+..++.|+......... ......+..++...+|++++........+...+
T Consensus 9 g~G~~g~vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~-------- 76 (285)
T cd05632 9 GKGGFGEVCACQVRA----TGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALC-------- 76 (285)
T ss_pred ecCCCeEEEEEEECC----CCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEE--------
Confidence 346789999987632 244555554422211111 122345667788889999987665554443333
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
.+|||+.|++|.+++...+ ..++...+..++.||+.||+|||++||+||||||+||+++..+.+|++|||+
T Consensus 77 --------lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~ 148 (285)
T cd05632 77 --------LVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred --------EEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCc
Confidence 3899999999999986543 3578889999999999999999999999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
+......
T Consensus 149 ~~~~~~~------------------------------------------------------------------------- 155 (285)
T cd05632 149 AVKIPEG------------------------------------------------------------------------- 155 (285)
T ss_pred ceecCCC-------------------------------------------------------------------------
Confidence 7553200
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcH
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
.......|+..|+|||.+.+..++.++|||||||++|||+++ |...
T Consensus 156 -------------------------------~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~ 204 (285)
T cd05632 156 -------------------------------ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGR 204 (285)
T ss_pred -------------------------------CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 000134688999999999998999999999999999999986 4332
Q ss_pred HHHH---HHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhh
Q 001366 533 RALA---AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEF 588 (1092)
Q Consensus 533 ~~~~---~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-----a~eiL~~~~~~~~ 588 (1092)
.... .....+.. ..+......++.+.+|+.+||.++|++||+ +.+++.|+||...
T Consensus 205 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 205 KEKVKREEVDRRVLE-TEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred CHHHHHHHHHHhhhc-cccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 2211 11111111 111222345678899999999999999999 8899999999875
No 211
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=1.5e-25 Score=285.80 Aligned_cols=292 Identities=17% Similarity=0.208 Sum_probs=222.7
Q ss_pred cchhhhhhccccccCCCCc--EEeEcCCeEEEEEcccceEEee---EEeeeecCCCCCEEEEEEcC-CCCEEEEEeCCCc
Q 001366 729 RENLFLAQQDQEIQNPTDR--LGAFFDGLCKYARYSKFEVQGM---LRTGEFNNSANVICSISFDR-DEDHFAAAGVSKK 802 (1092)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~--l~~~~D~~~k~w~~~~~~~~~~---l~~~~l~~h~~~V~sl~fsp-dg~~latgg~D~~ 802 (1092)
|.+.+.++. +++++. +++..|+.+++|+.......+. .....+ .+...|.+++|++ ++.+||+|+.|++
T Consensus 482 ~~~~V~~i~----fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~~las~~~Dg~ 556 (793)
T PLN00181 482 SSNLVCAIG----FDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVEL-ASRSKLSGICWNSYIKSQVASSNFEGV 556 (793)
T ss_pred CCCcEEEEE----ECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEe-cccCceeeEEeccCCCCEEEEEeCCCe
Confidence 444444443 345543 4778999999999753211110 001112 2346899999987 4789999999999
Q ss_pred EEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecC
Q 001366 803 IKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQV 882 (1092)
Q Consensus 803 I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~ 882 (1092)
|+|||+.+. .......+|...|++++|+|.++.+|+||+.||+|++||+.++..+..+..+ ..|.++.|++.
T Consensus 557 v~lWd~~~~-------~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~ 628 (793)
T PLN00181 557 VQVWDVARS-------QLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSE 628 (793)
T ss_pred EEEEECCCC-------eEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCC
Confidence 999998651 2223345789999999999855889999999999999999999998888754 67999999775
Q ss_pred CCCEEEEEeCCCcEEEEecCCCc-eeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCC-----CcceEEecC
Q 001366 883 HPTKLASGSDDCSVKLWNINEKN-SLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNA-----RAPWCVLAG 955 (1092)
Q Consensus 883 ~~~~laSgs~Dg~I~iWDl~~~~-~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~-----~~~~~~l~~ 955 (1092)
++..|++|+.|++|++||+++.+ .+.++. |...|.++.|. ++ .+|++++.|+.|++||++.. ..++..+.+
T Consensus 629 ~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~-~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~g 706 (793)
T PLN00181 629 SGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DS-STLVSSSTDNTLKLWDLSMSISGINETPLHSFMG 706 (793)
T ss_pred CCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CC-CEEEEEECCCEEEEEeCCCCccccCCcceEEEcC
Confidence 78999999999999999998765 455554 67789999997 44 38999999999999999853 235678899
Q ss_pred CCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCC---CC--ceeEEEcCCCCCeEEEEEecCCCEEEEEecCCc
Q 001366 956 HEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPS---TN--ACSLTFSGHTNEKNFVGLSTADGYIACGSESNE 1029 (1092)
Q Consensus 956 H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~---~~--~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~ 1029 (1092)
|...+.+++|+ ++.+|++|+.|++|++|+.......... .. ........|...|++++|+|++.+|++|+.||.
T Consensus 707 h~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~ 786 (793)
T PLN00181 707 HTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGN 786 (793)
T ss_pred CCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCc
Confidence 99999999998 6789999999999999998643211000 00 001122346677999999999999999999999
Q ss_pred EEEEeC
Q 001366 1030 VYAYHR 1035 (1092)
Q Consensus 1030 I~Iwd~ 1035 (1092)
|+||++
T Consensus 787 I~i~~~ 792 (793)
T PLN00181 787 IKILEM 792 (793)
T ss_pred EEEEec
Confidence 999985
No 212
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.95 E-value=4.3e-26 Score=238.61 Aligned_cols=273 Identities=16% Similarity=0.288 Sum_probs=220.7
Q ss_pred CCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEE
Q 001366 777 NSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKL 855 (1092)
Q Consensus 777 ~h~~~V~sl~fsp-dg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~I 855 (1092)
...+.|.+|+|+| ...++++|++|++|++|++.... ...+.....|.++|.+++|+.+ +..+++|+.|+.+++
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g-----~~~~ka~~~~~~PvL~v~Wsdd-gskVf~g~~Dk~~k~ 98 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSG-----QLVPKAQQSHDGPVLDVCWSDD-GSKVFSGGCDKQAKL 98 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCC-----cccchhhhccCCCeEEEEEccC-CceEEeeccCCceEE
Confidence 5677899999999 55677799999999999997521 2233455668999999999998 899999999999999
Q ss_pred EECCCCceEEEeeccCccEEEEEEecCCCC--EEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEE
Q 001366 856 WDACTGQTVSHYIEHEKRAWSVDFSQVHPT--KLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGS 933 (1092)
Q Consensus 856 WD~~tg~~i~~l~~h~~~V~sv~fsp~~~~--~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs 933 (1092)
||+.+++. ..+..|..+|.++.|-+ ... .|+|||+|.+||+||+++..++.++..+..+.++..-- -+++++.
T Consensus 99 wDL~S~Q~-~~v~~Hd~pvkt~~wv~-~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~---pm~vVat 173 (347)
T KOG0647|consen 99 WDLASGQV-SQVAAHDAPVKTCHWVP-GMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLY---PMAVVAT 173 (347)
T ss_pred EEccCCCe-eeeeecccceeEEEEec-CCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccC---ceeEEEe
Confidence 99999954 45677999999999987 444 79999999999999999999999999999999887652 3788999
Q ss_pred CCCeEEEEEcCCCCcceEEe-cCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCC-----
Q 001366 934 ADYRTYCYDLRNARAPWCVL-AGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHT----- 1006 (1092)
Q Consensus 934 ~Dg~I~vwDlr~~~~~~~~l-~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~----- 1006 (1092)
.+..|.+|+++++....... ..-+-.++||+.. +.+..+.|+..|.+-|..+..+.+. .-.+|+.|.
T Consensus 174 a~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~------~nFtFkCHR~~~~~ 247 (347)
T KOG0647|consen 174 AERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPK------DNFTFKCHRSTNSV 247 (347)
T ss_pred cCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCcc------CceeEEEeccCCCC
Confidence 99999999998764322221 2234467888876 6666789999999999999864322 223444444
Q ss_pred ----CCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEE
Q 001366 1007 ----NEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAA 1080 (1092)
Q Consensus 1007 ----~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasg 1080 (1092)
..|++|+|+|.-+.|++.+.||++.+||....+.+.+. ..|..+|++.+|+.+|.++|.|
T Consensus 248 ~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s--------------~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 248 NDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTS--------------ETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred CCceEEecceEeecccceEEEecCCceEEEecchhhhhhhcc--------------CcCCCccceeEecCCCCEEEEE
Confidence 24788999999999999999999999998766655543 4578899999999999999865
No 213
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.95 E-value=1.1e-27 Score=265.97 Aligned_cols=241 Identities=13% Similarity=0.089 Sum_probs=169.7
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+|.|.||+|.....-. ....++.|+..............++...+...+|||++.+......+...+
T Consensus 16 G~fg~V~~~~~~~~~~-~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~------------ 82 (266)
T cd05064 16 GRFGELCRGCLKLPSK-RELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM------------ 82 (266)
T ss_pred cCCCeEEEEEEecCCC-ceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE------------
Confidence 3679999986421111 123344444332222222333455666777789999998766544332222
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
.+|||+.|++|.+++......++..+++.++.||+.||+|||++||+||||||+||+++.++.+|++|||.+....
T Consensus 83 ----lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 83 ----IVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred ----EEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 3899999999999998765567888999999999999999999999999999999999999999999999764422
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
....
T Consensus 159 ~~~~---------------------------------------------------------------------------- 162 (266)
T cd05064 159 SEAI---------------------------------------------------------------------------- 162 (266)
T ss_pred ccch----------------------------------------------------------------------------
Confidence 0000
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHHH
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALA 536 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~~ 536 (1092)
.......++..|+|||.+.+..++.++|||||||++|||++ + |.......
T Consensus 163 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~ 216 (266)
T cd05064 163 --------------------------YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD 216 (266)
T ss_pred --------------------------hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence 00001234567999999999999999999999999999775 4 33222221
Q ss_pred HHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 537 AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 537 ~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
....+.....++.....++.+.+++..||+++|.+||++.+|++
T Consensus 217 -~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 217 -VIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred -HHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 22222333333344455678899999999999999999999976
No 214
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.95 E-value=1.2e-27 Score=262.68 Aligned_cols=240 Identities=15% Similarity=0.143 Sum_probs=169.7
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.++.|.||++.... .+..++.|+...............+..++....|||++.+......+...+
T Consensus 5 ~g~~g~vy~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~----------- 69 (252)
T cd05084 5 RGNFGEVFSGRLRA----DNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIY----------- 69 (252)
T ss_pred cccCccEEEEEEec----CCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeE-----------
Confidence 46789999987632 234445544322221222334455666788889999998766544332222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+|||+.|++|.+++...+..++..+++.++.||+.||.|||++||+||||||+||+++.++.+|++|||+++..
T Consensus 70 -----lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 144 (252)
T cd05084 70 -----IVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREE 144 (252)
T ss_pred -----EEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCccc
Confidence 389999999999999776666788899999999999999999999999999999999999999999999987653
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
.+....
T Consensus 145 ~~~~~~-------------------------------------------------------------------------- 150 (252)
T cd05084 145 EDGVYA-------------------------------------------------------------------------- 150 (252)
T ss_pred cccccc--------------------------------------------------------------------------
Confidence 310000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~ 535 (1092)
........+..|+|||.+.++.++.++|||||||++|||++ + |.....
T Consensus 151 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~- 202 (252)
T cd05084 151 ---------------------------STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN- 202 (252)
T ss_pred ---------------------------ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH-
Confidence 00000112345999999999889999999999999999996 4 222111
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
......+.....++.....++.+.+|+.+||+++|++|||+.++++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 203 QQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1122222222222233344678899999999999999999999986
No 215
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.95 E-value=9e-28 Score=271.91 Aligned_cols=245 Identities=13% Similarity=0.048 Sum_probs=167.9
Q ss_pred ccccceeeeCCCCCcc------------ccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 220 LKGKGIVCRGPPLNAF------------KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
.+|.|+||++...+.. ...+..++.|+............-.++..++...+|||++.++.....+...
T Consensus 15 ~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 94 (304)
T cd05096 15 EGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPL 94 (304)
T ss_pred ccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCCce
Confidence 3478999998653311 1112234555443222222223344567778888999999877665433332
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC------------------CCCCHHHHHHHHHHHHHHHHHhhhcC
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------------------HKGKRIECLYIFRQIVALVDYHHTQG 349 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~------------------~~~~~~~~~~i~~qil~~l~~lHs~g 349 (1092)
+ .+|||+.|++|.++|.... ..++..+++.|+.||+.||.|||++|
T Consensus 95 ~----------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 158 (304)
T cd05096 95 C----------------MITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN 158 (304)
T ss_pred E----------------EEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 2 3899999999999996532 23455678899999999999999999
Q ss_pred ccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCccccccccc
Q 001366 350 VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSL 429 (1092)
Q Consensus 350 IvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (1092)
|+||||||+|||++.++.+|++|||+++.+.....
T Consensus 159 ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~--------------------------------------------- 193 (304)
T cd05096 159 FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY--------------------------------------------- 193 (304)
T ss_pred ccccCcchhheEEcCCccEEECCCccceecccCce---------------------------------------------
Confidence 99999999999999999999999999876431000
Q ss_pred ccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC
Q 001366 430 FPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC 509 (1092)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~ 509 (1092)
........++..|+|||++.++.+
T Consensus 194 --------------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~ 217 (304)
T cd05096 194 --------------------------------------------------------YRIQGRAVLPIRWMAWECILMGKF 217 (304)
T ss_pred --------------------------------------------------------eEecCcCCCCccccCHHHHhcCCC
Confidence 000012345677999999998899
Q ss_pred CccccchhhhHHHHHHcCC-----CCcHHHHH--H-HHHhcc---ccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001366 510 TTSSNIYSLGVLFFELFGR-----FDSERALA--A-AMSDLR---DRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1092)
Q Consensus 510 t~~sDIwSLGvll~ell~~-----f~~~~~~~--~-~~~~~~---~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~e 578 (1092)
+.++|||||||++|||+++ |....... . .....+ ....+......++.+.+|+.+||..+|.+|||+.+
T Consensus 218 ~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~ 297 (304)
T cd05096 218 TTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSD 297 (304)
T ss_pred CchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHH
Confidence 9999999999999999852 33221111 1 111111 11112223345678899999999999999999999
Q ss_pred Hhh
Q 001366 579 ILQ 581 (1092)
Q Consensus 579 iL~ 581 (1092)
|.+
T Consensus 298 i~~ 300 (304)
T cd05096 298 IHA 300 (304)
T ss_pred HHH
Confidence 954
No 216
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.95 E-value=1.5e-27 Score=268.30 Aligned_cols=250 Identities=14% Similarity=0.132 Sum_probs=177.8
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ ++.|.||+|...+ .+..++.|+....+.. ....-.++...+...+|||++.+.+....+...+
T Consensus 14 y~i~~~lg~g~~g~vy~~~~~~----~~~~~~~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~--- 85 (292)
T cd06644 14 WEIIGELGDGAFGKVYKAKNKE----TGALAAAKVIETKSEE-ELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLW--- 85 (292)
T ss_pred hhhhheecCCCCeEEEEEEECC----CCceEEEEEeccCCHH-HHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEE---
Confidence 4444444 4789999997632 2344555554322211 1222334555677889999998766544333222
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
++|+|++|++|..++......++...++.++.||+.+|+|||++||+||||||+||+++.++.+||+
T Consensus 86 -------------lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~ 152 (292)
T cd06644 86 -------------IMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLA 152 (292)
T ss_pred -------------EEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEc
Confidence 3899999999999987665668888999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||++.......
T Consensus 153 dfg~~~~~~~~~-------------------------------------------------------------------- 164 (292)
T cd06644 153 DFGVSAKNVKTL-------------------------------------------------------------------- 164 (292)
T ss_pred cCccceeccccc--------------------------------------------------------------------
Confidence 999875422000
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc-----CCCCCccccchhhhHHHHHHc
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS-----GGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-----~~~~t~~sDIwSLGvll~ell 526 (1092)
.......+++.|+|||.+. ...++.++|||||||++|||+
T Consensus 165 -----------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~ 209 (292)
T cd06644 165 -----------------------------------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 209 (292)
T ss_pred -----------------------------------cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHh
Confidence 0001345778899999985 345788999999999999999
Q ss_pred CCCC---cHHHHHHHHHhccccCCC--CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 527 GRFD---SERALAAAMSDLRDRILP--PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 527 ~~f~---~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
++.. ............ ....| +.....+.++.+|+.+||..+|++||++.++++||||...
T Consensus 210 ~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 275 (292)
T cd06644 210 QIEPPHHELNPMRVLLKIA-KSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSV 275 (292)
T ss_pred cCCCCCccccHHHHHHHHh-cCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 8632 222222222222 11111 1223456789999999999999999999999999999764
No 217
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.95 E-value=4.2e-28 Score=272.25 Aligned_cols=244 Identities=16% Similarity=0.206 Sum_probs=174.9
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCch--hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS--DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++.... .+..++.|......... .......+..++....|++++.+......+...+
T Consensus 10 ~G~~g~v~~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~--------- 76 (285)
T cd05630 10 KGGFGEVCACQVRA----TGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALC--------- 76 (285)
T ss_pred cCCCeEEEEEEEcC----CCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEE---------
Confidence 46789999887632 24455554432211111 1122345666788889999987655544333222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
.+|+|+.|++|.+++...+ ..++..+++.++.|++.||+|||++||+||||||+||+++.++.++++|||++
T Consensus 77 -------lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~ 149 (285)
T cd05630 77 -------LVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLA 149 (285)
T ss_pred -------EEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccce
Confidence 3899999999999995433 35778899999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
......
T Consensus 150 ~~~~~~-------------------------------------------------------------------------- 155 (285)
T cd05630 150 VHVPEG-------------------------------------------------------------------------- 155 (285)
T ss_pred eecCCC--------------------------------------------------------------------------
Confidence 542200
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
.......||..|+|||.+.+..++.++|||||||++|||+++ |....
T Consensus 156 ------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~ 205 (285)
T cd05630 156 ------------------------------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 205 (285)
T ss_pred ------------------------------ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence 000134688899999999999999999999999999999986 33211
Q ss_pred H---HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhh
Q 001366 534 A---LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEF 588 (1092)
Q Consensus 534 ~---~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-----a~eiL~~~~~~~~ 588 (1092)
. ......... ..........++.+.+|+..||++||.+||| +.|+++||||.+.
T Consensus 206 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 206 KKIKREEVERLVK-EVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred ccchHHHHHhhhh-hhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 1 111111111 1111122345678899999999999999999 8999999999864
No 218
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.95 E-value=1.1e-27 Score=265.60 Aligned_cols=245 Identities=18% Similarity=0.112 Sum_probs=172.0
Q ss_pred hhhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 217 KTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 217 ~~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
+...+|.|+||+|...+ ++..++.|.... ....+...-.++..++...+|+|++.+......+...+
T Consensus 15 ~lg~g~~g~v~~~~~~~----~~~~v~~k~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~-------- 81 (268)
T cd06624 15 VLGKGTYGIVYAARDLS----TQVRIAIKEIPE-RDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK-------- 81 (268)
T ss_pred EEecCCceEEEEeEecC----CCcEEEEEEecC-CCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE--------
Confidence 44556889999997532 234444443321 11222233445566777889999998766544332222
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCC--CHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc-CCcEEEecc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKG--KRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGP 373 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~--~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~-~~~vkl~Df 373 (1092)
.++||+.|++|.+++......+ +...++.++.||+.||.|||++||+||||||+||+++. .+.+|++||
T Consensus 82 --------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~df 153 (268)
T cd06624 82 --------IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDF 153 (268)
T ss_pred --------EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecc
Confidence 3799999999999997653334 77788899999999999999999999999999999976 678999999
Q ss_pred cccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCC
Q 001366 374 IIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPH 453 (1092)
Q Consensus 374 g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 453 (1092)
|++.......
T Consensus 154 g~~~~~~~~~---------------------------------------------------------------------- 163 (268)
T cd06624 154 GTSKRLAGIN---------------------------------------------------------------------- 163 (268)
T ss_pred hhheecccCC----------------------------------------------------------------------
Confidence 9876533100
Q ss_pred CCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC--CCccccchhhhHHHHHHcCCCCc
Q 001366 454 SHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV--CTTSSNIYSLGVLFFELFGRFDS 531 (1092)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~--~t~~sDIwSLGvll~ell~~f~~ 531 (1092)
.......|++.|+|||.+.+.. ++.++|+|||||++|+|+++..+
T Consensus 164 ---------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p 210 (268)
T cd06624 164 ---------------------------------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPP 210 (268)
T ss_pred ---------------------------------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCC
Confidence 0001234678899999987643 78999999999999999986322
Q ss_pred H---H-HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 532 E---R-ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 532 ~---~-~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
. . ..............+.......+++.+|+.+||+++|.+|||+.+++.||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 211 FIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred CccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 2 1 1111111111122222223456788999999999999999999999999997
No 219
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.95 E-value=6.1e-26 Score=242.79 Aligned_cols=291 Identities=13% Similarity=0.200 Sum_probs=232.3
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.|..|+..|++++.+|+.+++||||.|....||+..+. .......+|+..|+|+.|+.+ +.+||||+.+|.|
T Consensus 59 tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~g-------e~~~eltgHKDSVt~~~Fshd-gtlLATGdmsG~v 130 (399)
T KOG0296|consen 59 TFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTG-------EFAGELTGHKDSVTCCSFSHD-GTLLATGDMSGKV 130 (399)
T ss_pred ehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCC-------cceeEecCCCCceEEEEEccC-ceEEEecCCCccE
Confidence 46789999999999999999999999999999998762 244556789999999999998 9999999999999
Q ss_pred EEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEE
Q 001366 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFG 932 (1092)
Q Consensus 854 ~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latg 932 (1092)
+||+..++.....+..--..+.-+.|+| .+.+|+.|+.||.+-+|.+.++...+.+. |..+++|-.|.|+|+ .+++|
T Consensus 131 ~v~~~stg~~~~~~~~e~~dieWl~WHp-~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGK-r~~tg 208 (399)
T KOG0296|consen 131 LVFKVSTGGEQWKLDQEVEDIEWLKWHP-RAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGK-RILTG 208 (399)
T ss_pred EEEEcccCceEEEeecccCceEEEEecc-cccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCc-eEEEE
Confidence 9999999998888875566788899999 88999999999999999999876666666 678899999999996 89999
Q ss_pred ECCCeEEEEEcCCCCcceEEec-CCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeE
Q 001366 933 SADYRTYCYDLRNARAPWCVLA-GHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKN 1010 (1092)
Q Consensus 933 s~Dg~I~vwDlr~~~~~~~~l~-~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~ 1010 (1092)
..||+|++||..++.+ +..+. .......++.++ .+..+++|+.++.+++-+..+++-.....+........+...+.
T Consensus 209 y~dgti~~Wn~ktg~p-~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~e 287 (399)
T KOG0296|consen 209 YDDGTIIVWNPKTGQP-LHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDE 287 (399)
T ss_pred ecCceEEEEecCCCce-eEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhh
Confidence 9999999999999864 44443 334456778877 67788889999988888776432111111000111113445555
Q ss_pred EEEE---ecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEE
Q 001366 1011 FVGL---STADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIK 1087 (1092)
Q Consensus 1011 ~v~~---spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~ 1087 (1092)
+|.+ +..=.+.|||+-||+|.|||.....+... -.|...|..+.|-+ ..+|+|++.||.|+
T Consensus 288 sve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~---------------c~he~~V~~l~w~~-t~~l~t~c~~g~v~ 351 (399)
T KOG0296|consen 288 SVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHI---------------CEHEDGVTKLKWLN-TDYLLTACANGKVR 351 (399)
T ss_pred hhhhcccccccchhhcccccceEEEEecccchhhee---------------ccCCCceEEEEEcC-cchheeeccCceEE
Confidence 5544 44556889999999999999876544322 24677899999999 88999999999999
Q ss_pred EEEc
Q 001366 1088 VLQM 1091 (1092)
Q Consensus 1088 vW~l 1091 (1092)
.||.
T Consensus 352 ~wDa 355 (399)
T KOG0296|consen 352 QWDA 355 (399)
T ss_pred eeec
Confidence 9984
No 220
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.95 E-value=5.8e-28 Score=270.20 Aligned_cols=242 Identities=16% Similarity=0.191 Sum_probs=170.6
Q ss_pred ccccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.++.|.||+|.... .+..++.|+..... .........++..++....|||++.+.+....+...+
T Consensus 10 ~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~---------- 75 (285)
T cd07861 10 EGTYGVVYKGRNKK----TGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLY---------- 75 (285)
T ss_pred ccCceEEEEEEECC----CCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEE----------
Confidence 35679999997521 23445554432211 1112233445566777888999998776654332222
Q ss_pred cccCCCcccccCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNAR--GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~--~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
.+|+|+. ++|.+++... +..++..+++.++.||+.||+|||++||+||||||+||+++.++.+|++|||++
T Consensus 76 ------~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 148 (285)
T cd07861 76 ------LIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLA 148 (285)
T ss_pred ------EEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccce
Confidence 3799998 5899998643 246788899999999999999999999999999999999999999999999988
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+....+
T Consensus 149 ~~~~~~-------------------------------------------------------------------------- 154 (285)
T cd07861 149 RAFGIP-------------------------------------------------------------------------- 154 (285)
T ss_pred eecCCC--------------------------------------------------------------------------
Confidence 653310
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
........++++|+|||.+.+ ..++.++|||||||++|||+++ |...
T Consensus 155 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~ 205 (285)
T cd07861 155 -----------------------------VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGD 205 (285)
T ss_pred -----------------------------cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 000113356888999999876 4578999999999999999986 4332
Q ss_pred HHHHHHHHhccc---------------------------cCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 533 RALAAAMSDLRD---------------------------RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 533 ~~~~~~~~~~~~---------------------------~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
............ ..+.......++++.+|+.+||++||.+|||+.+|+.||||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 206 SEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred CHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 222211111100 00011123457888999999999999999999999999997
No 221
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.95 E-value=5.7e-28 Score=274.83 Aligned_cols=248 Identities=17% Similarity=0.164 Sum_probs=165.6
Q ss_pred hhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 218 TTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 218 ~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
...+|.|.||++...+... +..++.|...... ......++..++...+|||++.+...........
T Consensus 9 lG~G~~g~Vy~~~~~~~~~--~~~~a~k~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~--------- 74 (317)
T cd07867 9 VGRGTYGHVYKAKRKDGKD--EKEYALKQIEGTG---ISMSACREIALLRELKHPNVIALQKVFLSHSDRK--------- 74 (317)
T ss_pred eccCCCeeEEEEEecCCCc--cceEEEEEecCCC---CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCe---------
Confidence 4456889999998643211 2344444332211 1223456677888899999997665543211111
Q ss_pred ccccCCCcccccCCCCCHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE----ccC
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNAR--------GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL----LQS 365 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~--------~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill----~~~ 365 (1092)
. ..+|+|+++ +|.+++... ...++...++.++.||+.||.|||++||+||||||+|||+ ...
T Consensus 75 ~-----~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 148 (317)
T cd07867 75 V-----WLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPER 148 (317)
T ss_pred E-----EEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCC
Confidence 0 136788765 888887532 1246777899999999999999999999999999999999 456
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+.+||+|||+++....+..
T Consensus 149 ~~~kl~DfG~a~~~~~~~~------------------------------------------------------------- 167 (317)
T cd07867 149 GRVKIADMGFARLFNSPLK------------------------------------------------------------- 167 (317)
T ss_pred CcEEEeeccceeccCCCcc-------------------------------------------------------------
Confidence 7899999999876431100
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~e 524 (1092)
+........||+.|+|||.+.+ ..++.++|||||||++||
T Consensus 168 ---------------------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~e 208 (317)
T cd07867 168 ---------------------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAE 208 (317)
T ss_pred ---------------------------------------cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHH
Confidence 0001124578999999999987 458999999999999999
Q ss_pred HcCC---CCcHHH------------HHHHHHh-----------cc-------------ccCC---------CCCCCCCCh
Q 001366 525 LFGR---FDSERA------------LAAAMSD-----------LR-------------DRIL---------PPSFLSENP 556 (1092)
Q Consensus 525 ll~~---f~~~~~------------~~~~~~~-----------~~-------------~~~~---------p~~~~~~~~ 556 (1092)
|+++ |..... ....... .+ .... +........
T Consensus 209 l~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (317)
T cd07867 209 LLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDS 288 (317)
T ss_pred HHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCCh
Confidence 9996 321110 0000000 00 0000 000112345
Q ss_pred hHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 557 KEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 557 ~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
.+.+|+.+||..||.+|||+.|+|+||||
T Consensus 289 ~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 289 KVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred HHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 67799999999999999999999999997
No 222
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.95 E-value=3.7e-28 Score=301.68 Aligned_cols=255 Identities=15% Similarity=0.098 Sum_probs=181.9
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+...+ +|+|.||++.... .+..++.|+....... ........+..++...+||||+.+++........
T Consensus 14 ~YeIl~kLG~GgFGtVYLAkdk~----tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~-- 87 (1021)
T PTZ00266 14 EYEVIKKIGNGRFGEVFLVKHKR----TQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ-- 87 (1021)
T ss_pred CEEEEEEEecCCCeEEEEEEECC----CCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC--
Confidence 45555544 4789999987632 2444555544322222 2233445677788889999999877654322111
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhhc-------CccccCCCCCC
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQIVALVDYHHTQ-------GVTFLDLKPSS 359 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~---~~~~~~~~~~~i~~qil~~l~~lHs~-------gIvHrDLKP~N 359 (1092)
.. .++||||.|++|.++|... ...++...++.|+.||+.||+|||+. +||||||||+|
T Consensus 88 -----~l-------yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeN 155 (1021)
T PTZ00266 88 -----KL-------YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQN 155 (1021)
T ss_pred -----EE-------EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHH
Confidence 11 1379999999999999653 24578889999999999999999984 49999999999
Q ss_pred eEEccC-----------------CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcc
Q 001366 360 FKLLQS-----------------NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMN 422 (1092)
Q Consensus 360 ill~~~-----------------~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (1092)
|||+.. ..+||+|||+++.+...
T Consensus 156 ILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~---------------------------------------- 195 (1021)
T PTZ00266 156 IFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIE---------------------------------------- 195 (1021)
T ss_pred eEeecCccccccccccccccCCCCceEEccCCcccccccc----------------------------------------
Confidence 999642 34788888877653200
Q ss_pred cccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcc
Q 001366 423 FSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPE 502 (1092)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 502 (1092)
......+||+.|+|||
T Consensus 196 ----------------------------------------------------------------s~~~s~vGTp~YmAPE 211 (1021)
T PTZ00266 196 ----------------------------------------------------------------SMAHSCVGTPYYWSPE 211 (1021)
T ss_pred ----------------------------------------------------------------ccccccCCCccccCHH
Confidence 0001357899999999
Q ss_pred cccC--CCCCccccchhhhHHHHHHcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001366 503 ELSG--GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1092)
Q Consensus 503 ~l~~--~~~t~~sDIwSLGvll~ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~ 577 (1092)
++.+ ..++.++||||||||||||+++ |.........+..+...+.. .....++.+.+||..||.++|.+||++.
T Consensus 212 vL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~l-pi~~~S~eL~dLI~~~L~~dPeeRPSa~ 290 (1021)
T PTZ00266 212 LLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDL-PIKGKSKELNILIKNLLNLSAKERPSAL 290 (1021)
T ss_pred HHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCC-CcCCCCHHHHHHHHHHhcCChhHCcCHH
Confidence 9865 4589999999999999999986 44444444444444433222 2334578899999999999999999999
Q ss_pred HHhhhhhhhhhhc
Q 001366 578 EILQSEVTNEFQE 590 (1092)
Q Consensus 578 eiL~~~~~~~~~~ 590 (1092)
++|+|+||.....
T Consensus 291 QlL~h~~ik~i~~ 303 (1021)
T PTZ00266 291 QCLGYQIIKNVGP 303 (1021)
T ss_pred HHhccHHHhhcCC
Confidence 9999999986543
No 223
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=1e-27 Score=270.58 Aligned_cols=245 Identities=14% Similarity=0.120 Sum_probs=177.2
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.++.|.||+|... ..+..++.|....... ........+...+....|||++.+.+....+...+
T Consensus 30 ~g~~~~v~~~~~~----~~~~~v~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~----------- 93 (296)
T cd06654 30 QGASGTVYTAMDV----ATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVGDELW----------- 93 (296)
T ss_pred CCCCeEEEEEEEC----CCCcEEEEEEEecCCc-chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE-----------
Confidence 3467999999742 1234455543322221 12233444556677889999998776544322222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
++|+|+.|++|.+++... .++..+++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++..
T Consensus 94 -----lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~ 166 (296)
T cd06654 94 -----VVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (296)
T ss_pred -----EeecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhc
Confidence 389999999999999654 4677799999999999999999999999999999999999999999999987653
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
....
T Consensus 167 ~~~~---------------------------------------------------------------------------- 170 (296)
T cd06654 167 TPEQ---------------------------------------------------------------------------- 170 (296)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 2100
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALA 536 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~ 536 (1092)
.......|++.|+|||.+.+..++.++|||||||++|||+++ |.......
T Consensus 171 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~ 223 (296)
T cd06654 171 ---------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR 223 (296)
T ss_pred ---------------------------cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 000134578889999999988899999999999999999986 43333333
Q ss_pred HHHHhccccCCC-CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 537 AAMSDLRDRILP-PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 537 ~~~~~~~~~~~p-~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
...........+ +.....++.+.+|+.+||.++|..||++.+|++||||...+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 224 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred hHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 322222222211 222345678899999999999999999999999999976533
No 224
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.95 E-value=1.3e-27 Score=267.03 Aligned_cols=243 Identities=15% Similarity=0.050 Sum_probs=170.5
Q ss_pred hccccceeeeCCCC-CccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPL-NAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..+|.|+||+|... ++... ...++.|+..............++...+....|||++.++........
T Consensus 16 g~G~~g~vy~~~~~~~~~~~-~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~----------- 83 (279)
T cd05109 16 GSGAFGTVYKGIWIPDGENV-KIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTV----------- 83 (279)
T ss_pred CCCCCceEEEEEEecCCCcc-ceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCc-----------
Confidence 34578999999742 11111 112344554333333333444555666777789999876544321111
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
..+|+|+++|+|.+++......++..+++.++.||+.||.|||++||+||||||+|||+..++.+|++|||+++
T Consensus 84 ------~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 84 ------QLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred ------EEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCcee
Confidence 13799999999999997765567888999999999999999999999999999999999999999999999987
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+......
T Consensus 158 ~~~~~~~~------------------------------------------------------------------------ 165 (279)
T cd05109 158 LLDIDETE------------------------------------------------------------------------ 165 (279)
T ss_pred ecccccce------------------------------------------------------------------------
Confidence 64310000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSER 533 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~ 533 (1092)
.......++..|+|||.+.+..++.++|||||||+||||++ + |....
T Consensus 166 -----------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 216 (279)
T cd05109 166 -----------------------------YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP 216 (279)
T ss_pred -----------------------------eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 00001123566999999998889999999999999999987 4 32221
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
. ......+.....++.....++.+.+++.+||+.||.+||++.++++
T Consensus 217 ~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 217 A-REIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred H-HHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1 1122222232333334456788999999999999999999999985
No 225
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.95 E-value=5.1e-28 Score=236.45 Aligned_cols=244 Identities=16% Similarity=0.176 Sum_probs=189.2
Q ss_pred cccceeeeCCCCCccccccccccc-cccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDT-KAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
+-.|.|+||...+ ..+.++. ++....+...-..-+.++.-++...+|.||+.+++...++.-+-
T Consensus 13 gtygtvfkarn~~----t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkklt----------- 77 (292)
T KOG0662|consen 13 GTYGTVFKARNRE----THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLT----------- 77 (292)
T ss_pred CcceeeEecccCC----ccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeE-----------
Confidence 3479999999843 4455555 33444444444456788888999999999999888766554433
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+.|||+ .+|..++.+.+..++...++.++.|+++||.|||+++|.||||||.|+||..+|.+|++|||+++.+
T Consensus 78 -----lvfe~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglaraf 151 (292)
T KOG0662|consen 78 -----LVFEFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAF 151 (292)
T ss_pred -----EeHHHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhc
Confidence 2567775 4899999888888999999999999999999999999999999999999999999999999999875
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
+-+.
T Consensus 152 gipv---------------------------------------------------------------------------- 155 (292)
T KOG0662|consen 152 GIPV---------------------------------------------------------------------------- 155 (292)
T ss_pred CCce----------------------------------------------------------------------------
Confidence 4110
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC----CCcHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR----FDSERA 534 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~----f~~~~~ 534 (1092)
.-++..+-|.||++|.++.| .-|+++.|+||-|||+.||... |++...
T Consensus 156 ---------------------------rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dv 208 (292)
T KOG0662|consen 156 ---------------------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV 208 (292)
T ss_pred ---------------------------EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcH
Confidence 11123467999999999999 4589999999999999999862 888777
Q ss_pred HHHHHHhccccCC------C-----------CCC----------CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 535 LAAAMSDLRDRIL------P-----------PSF----------LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 535 ~~~~~~~~~~~~~------p-----------~~~----------~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
..+.+.+.+.--. | |.+ +..+..-+++++++|.-+|..|++|++.|+||||.+
T Consensus 209 ddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d 288 (292)
T KOG0662|consen 209 DDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD 288 (292)
T ss_pred HHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence 7777665543211 1 111 223344589999999999999999999999999976
Q ss_pred h
Q 001366 588 F 588 (1092)
Q Consensus 588 ~ 588 (1092)
.
T Consensus 289 ~ 289 (292)
T KOG0662|consen 289 F 289 (292)
T ss_pred c
Confidence 4
No 226
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=8.3e-28 Score=273.29 Aligned_cols=243 Identities=17% Similarity=0.111 Sum_probs=180.9
Q ss_pred hHHHhhhcc-c-cceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTLK-G-KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~~-g-~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
++.+.+.|+ | +|.|+.|...+..++ ++|.... +......-.++..++..++|+|++.++.......+.+|
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~v-----avk~ik~--~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyI- 278 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKV-----AVKTIKE--GSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYI- 278 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcc-----cceEEec--cccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEE-
Confidence 455555555 3 799999999764444 3322211 12222233378888999999999988777665555553
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
+|||+..|+|.+||+. .+..+...+.+.++.||++|++||+++++|||||...|||++.++.+|
T Consensus 279 ---------------VtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vK 343 (468)
T KOG0197|consen 279 ---------------VTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVK 343 (468)
T ss_pred ---------------EEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEE
Confidence 8999999999999986 667888889999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+||...+.... .+.|
T Consensus 344 IsDFGLAr~~~d~~Y~----------------------------------------------~~~~-------------- 363 (468)
T KOG0197|consen 344 ISDFGLARLIGDDEYT----------------------------------------------ASEG-------------- 363 (468)
T ss_pred EcccccccccCCCcee----------------------------------------------ecCC--------------
Confidence 9999999954321000 0000
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC-
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~- 528 (1092)
+..| -.|.|||.+..+.++.+||+||+||+||||+|.
T Consensus 364 --------------------------------~kfP----------IkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G 401 (468)
T KOG0197|consen 364 --------------------------------GKFP----------IKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYG 401 (468)
T ss_pred --------------------------------CCCC----------ceecCHHHHhhCCcccccceeehhhhHHHHhccC
Confidence 0000 127899999999999999999999999999983
Q ss_pred --CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHh
Q 001366 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREIL 580 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL 580 (1092)
+.+.......+..+.....-|....+++.+-+++..|++.+|++|||++.+.
T Consensus 402 ~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 402 RVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred CCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 3344444455555544443344455688888999999999999999998554
No 227
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.95 E-value=7.1e-28 Score=271.40 Aligned_cols=251 Identities=19% Similarity=0.217 Sum_probs=180.2
Q ss_pred HHhhhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCC
Q 001366 215 FVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTG 294 (1092)
Q Consensus 215 ~~~~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1092)
+.+...+|.|.||++.... .+..++.|.... ...........+...++...|||++...+........
T Consensus 27 ~~~lg~g~~g~v~~~~~~~----~~~~vaiK~~~~-~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~------- 94 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKH----TGKQVAVKKMDL-RKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDEL------- 94 (292)
T ss_pred hhcccCCCCeEEEEEEECC----CCCEEEEEEEec-chHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeE-------
Confidence 4455667889999987522 234445543311 1112223344555677788999998766553322211
Q ss_pred CCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccc
Q 001366 295 VPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1092)
Q Consensus 295 ~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg 374 (1092)
.++|||+.|++|.+++... .++..+++.++.||+.||+|||++||+||||||+||+++.++.+|++|||
T Consensus 95 ---------~lv~e~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg 163 (292)
T cd06658 95 ---------WVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFG 163 (292)
T ss_pred ---------EEEEeCCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCc
Confidence 2489999999999998653 47778999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
++.......
T Consensus 164 ~~~~~~~~~----------------------------------------------------------------------- 172 (292)
T cd06658 164 FCAQVSKEV----------------------------------------------------------------------- 172 (292)
T ss_pred chhhccccc-----------------------------------------------------------------------
Confidence 876532100
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCc
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDS 531 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~ 531 (1092)
.......|+..|+|||.+.+..++.++|||||||++|||+++ |..
T Consensus 173 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~ 220 (292)
T cd06658 173 --------------------------------PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFN 220 (292)
T ss_pred --------------------------------ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 000134678899999999888899999999999999999986 333
Q ss_pred HHHHHHHHHhccccC--CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhccc
Q 001366 532 ERALAAAMSDLRDRI--LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1092)
Q Consensus 532 ~~~~~~~~~~~~~~~--~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~~~ 592 (1092)
..... .+..+.... ..+.....++.+.+|+.+||.++|.+|||+.++++||||.....+.
T Consensus 221 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 221 EPPLQ-AMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred CCHHH-HHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence 22222 222222211 1112224567889999999999999999999999999998765544
No 228
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.95 E-value=8.6e-28 Score=265.67 Aligned_cols=244 Identities=18% Similarity=0.188 Sum_probs=179.3
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..++.|.||++... ..++.++.|...............++...+....|||++.+......+...+
T Consensus 10 g~g~~~~v~~~~~~----~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~---------- 75 (265)
T cd06605 10 GAGNSGVVSKVLHR----PTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDIS---------- 75 (265)
T ss_pred cCCCCeEEEEEEEc----CCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEE----------
Confidence 34578999998763 2244555555433322233333445556677778999998766654432222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhh-cCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs-~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++++|+.|++|.+++......++...+..++.||+.||+|+|+ .||+|+||||+||+++.++.++++|||.+.
T Consensus 76 ------lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~ 149 (265)
T cd06605 76 ------ICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSG 149 (265)
T ss_pred ------EEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccch
Confidence 3799999999999997764567888899999999999999999 999999999999999999999999999876
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+.....
T Consensus 150 ~~~~~~~------------------------------------------------------------------------- 156 (265)
T cd06605 150 QLVNSLA------------------------------------------------------------------------- 156 (265)
T ss_pred hhHHHHh-------------------------------------------------------------------------
Confidence 5431000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcH--
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSE-- 532 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~-- 532 (1092)
....++..|+|||.+.+..++.++|||||||++|+|+++ |...
T Consensus 157 --------------------------------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~ 204 (265)
T cd06605 157 --------------------------------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPEND 204 (265)
T ss_pred --------------------------------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccc
Confidence 013467779999999999999999999999999999985 3222
Q ss_pred --HHHHHHHHhccccCCCCCCCC-CChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 533 --RALAAAMSDLRDRILPPSFLS-ENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 533 --~~~~~~~~~~~~~~~p~~~~~-~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
......+........|..... .++.+.+|+..||..+|.+||++.+++.||||..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 205 PPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred ccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence 122222332222222222222 5788999999999999999999999999999965
No 229
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.95 E-value=1.2e-27 Score=266.96 Aligned_cols=241 Identities=16% Similarity=0.190 Sum_probs=167.0
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
++.|.||++... ..+..++.|+..............++...+... .|||++.+......+. .+..+
T Consensus 10 g~~~~v~~~~~~----~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~-------~~~~~-- 76 (282)
T cd07831 10 GTFSEVLKAQSR----KTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRK-------TGRLA-- 76 (282)
T ss_pred cccceEEEEEEc----CCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCC-------CCcEE--
Confidence 467999999762 224555665543222222233344555555555 5999988665544320 01111
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+|||+.| +|.+++......++..+++.++.||+.||.|||++||+||||||+||+++. +.+|++|||+++.+
T Consensus 77 -----lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~ 149 (282)
T cd07831 77 -----LVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGI 149 (282)
T ss_pred -----EEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEeccccccc
Confidence 37888875 888888765556788899999999999999999999999999999999999 99999999988654
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
....
T Consensus 150 ~~~~---------------------------------------------------------------------------- 153 (282)
T cd07831 150 YSKP---------------------------------------------------------------------------- 153 (282)
T ss_pred ccCC----------------------------------------------------------------------------
Confidence 3100
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
......++.+|+|||.+.. ..++.++|||||||++|||+++ |......
T Consensus 154 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~ 205 (282)
T cd07831 154 ----------------------------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL 205 (282)
T ss_pred ----------------------------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH
Confidence 0012356889999998755 5578999999999999999985 4333221
Q ss_pred HH--HHHhcccc-----------------CCCC--------CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 536 AA--AMSDLRDR-----------------ILPP--------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 536 ~~--~~~~~~~~-----------------~~p~--------~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
.. ........ ..|+ .....+..+.+|+.+||+++|++||++.++|+||||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 206 DQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred HHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 11 11110000 0111 112346788999999999999999999999999997
No 230
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.95 E-value=7.8e-28 Score=269.18 Aligned_cols=243 Identities=17% Similarity=0.147 Sum_probs=168.7
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchh--hHhh---hhhhhhhccCCCCCCCccccceecCCCCCCCccCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD--AALK---AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTG 294 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1092)
.++.|.||++...+ .+..++.|+......... .... .....++....||+++.+......+...+
T Consensus 4 ~G~~g~Vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------ 73 (279)
T cd05633 4 RGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLC------ 73 (279)
T ss_pred cCCCeEEEEEEECC----CCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEE------
Confidence 46789999987632 244455544322111111 1111 12223444567888886555443322222
Q ss_pred CCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccc
Q 001366 295 VPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1092)
Q Consensus 295 ~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg 374 (1092)
.+|||+.|++|.+++...+ .++...+..|+.||+.||+|||++||+||||||+||+++.++.++++|||
T Consensus 74 ----------lv~e~~~~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg 142 (279)
T cd05633 74 ----------FILDLMNGGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG 142 (279)
T ss_pred ----------EEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCC
Confidence 3899999999999997665 47777999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
++.......
T Consensus 143 ~~~~~~~~~----------------------------------------------------------------------- 151 (279)
T cd05633 143 LACDFSKKK----------------------------------------------------------------------- 151 (279)
T ss_pred cceeccccC-----------------------------------------------------------------------
Confidence 876432000
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CC
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FD 530 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~ 530 (1092)
.....||..|+|||.+.+ ..++.++|||||||+||||+++ |.
T Consensus 152 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 197 (279)
T cd05633 152 ----------------------------------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFR 197 (279)
T ss_pred ----------------------------------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcC
Confidence 002357889999999874 5689999999999999999986 32
Q ss_pred cHHH-HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 531 SERA-LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 531 ~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
.... .............+......++++.+|+.+||+.||++|| ++.++++||||.+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~ 261 (279)
T cd05633 198 QHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGI 261 (279)
T ss_pred CCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCC
Confidence 2110 0011111111111112234578899999999999999999 69999999999874
No 231
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.95 E-value=1.5e-27 Score=266.74 Aligned_cols=240 Identities=18% Similarity=0.151 Sum_probs=172.1
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..++.|+||++... ..+..++.|+...............+...+....|||++.+++....+...+
T Consensus 10 g~g~~~~v~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~---------- 75 (279)
T cd06619 10 GHGNGGTVYKAYHL----LTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRIS---------- 75 (279)
T ss_pred ccCCCeEEEEEEEc----CCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEE----------
Confidence 34568999999752 2245555555432211222223334555677789999998776655433222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+|||++|++|..+. .+++..+..++.||+.||+|||++||+|+||||+||+++.++.+|++|||++..
T Consensus 76 ------lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~ 144 (279)
T cd06619 76 ------ICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQ 144 (279)
T ss_pred ------EEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCccee
Confidence 379999999997652 356778899999999999999999999999999999999999999999998865
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+...
T Consensus 145 ~~~~---------------------------------------------------------------------------- 148 (279)
T cd06619 145 LVNS---------------------------------------------------------------------------- 148 (279)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 3310
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcHHHH---
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--- 535 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~~~~--- 535 (1092)
..+..+||..|+|||.+.+..++.++|+|||||++|||+++..+....
T Consensus 149 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~ 199 (279)
T cd06619 149 -----------------------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKN 199 (279)
T ss_pred -----------------------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccc
Confidence 001346788899999999988999999999999999999863222110
Q ss_pred ------HHHHHhccccCCCC-CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 536 ------AAAMSDLRDRILPP-SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 536 ------~~~~~~~~~~~~p~-~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
......+.....+. .....++++.+|+.+||+++|.+||++.|+++||||...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~ 259 (279)
T cd06619 200 QGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQY 259 (279)
T ss_pred ccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence 11111111111111 122356889999999999999999999999999999764
No 232
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=1.6e-27 Score=269.08 Aligned_cols=244 Identities=14% Similarity=0.122 Sum_probs=177.0
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
++.|.||+|... ..++.++.|.+..... ........+...+...+|||++..++........+
T Consensus 30 g~~g~vy~~~~~----~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~------------ 92 (296)
T cd06655 30 GASGTVFTAIDV----ATGQEVAIKQINLQKQ-PKKELIINEILVMKELKNPNIVNFLDSFLVGDELF------------ 92 (296)
T ss_pred CCCeEEEEEEEc----CCCcEEEEEEEecccC-chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEE------------
Confidence 467999998642 1244555554422211 12233344556677889999997665543222222
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
.+++|+.|++|.+++... .++..+++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++...
T Consensus 93 ----lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~ 166 (296)
T cd06655 93 ----VVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQIT 166 (296)
T ss_pred ----EEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcc
Confidence 389999999999999754 47788999999999999999999999999999999999999999999999876533
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
...
T Consensus 167 ~~~----------------------------------------------------------------------------- 169 (296)
T cd06655 167 PEQ----------------------------------------------------------------------------- 169 (296)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 100
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHHH
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAA 537 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~~ 537 (1092)
.......|+..|+|||.+.+..++.++|||||||++|+|+++ |........
T Consensus 170 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~ 223 (296)
T cd06655 170 --------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA 223 (296)
T ss_pred --------------------------ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 000133578889999999988899999999999999999986 433333222
Q ss_pred HHHhccccC-CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 538 AMSDLRDRI-LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 538 ~~~~~~~~~-~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
......... ........++.+.+|+.+||..+|.+||++.+|++||||.....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~ 277 (296)
T cd06655 224 LYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKP 277 (296)
T ss_pred HHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhccc
Confidence 222221111 11223345788999999999999999999999999999987554
No 233
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.95 E-value=2.6e-27 Score=264.76 Aligned_cols=244 Identities=12% Similarity=-0.013 Sum_probs=166.1
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|+||+|.....-......++.|................+...+....|||++..+........
T Consensus 17 ~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~------------- 83 (279)
T cd05111 17 SGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASL------------- 83 (279)
T ss_pred ccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCcc-------------
Confidence 4578999999752210100112333333211111111222333345667899999986554221111
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
..+++|+.+|+|.+++......+++..++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++..
T Consensus 84 ----~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 84 ----QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred ----EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 1279999999999999876667888899999999999999999999999999999999999999999999998764
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
.....
T Consensus 160 ~~~~~--------------------------------------------------------------------------- 164 (279)
T cd05111 160 YPDDK--------------------------------------------------------------------------- 164 (279)
T ss_pred cCCCc---------------------------------------------------------------------------
Confidence 31000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~ 535 (1092)
....+...++..|+|||.+.+..++.++|||||||++|||++ + |.+....
T Consensus 165 --------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~ 218 (279)
T cd05111 165 --------------------------KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH 218 (279)
T ss_pred --------------------------ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 000012345667999999998899999999999999999997 4 3332221
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
.....+.....++........+..++.+||..+|..|||+.|+++.
T Consensus 219 -~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~ 264 (279)
T cd05111 219 -EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANE 264 (279)
T ss_pred -HHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1112222222222222345678899999999999999999999773
No 234
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=6.7e-28 Score=246.96 Aligned_cols=244 Identities=16% Similarity=0.132 Sum_probs=179.9
Q ss_pred HHHhhhcc-c-cceeeeCCCCCccccccccccccccc----cccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 214 FFVKTTLK-G-KGIVCRGPPLNAFKERRGMIDTKAFV----TTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 214 ~~~~~~~~-g-~Gvv~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
|.+-+-|+ | +|-||.|......+. ++.||.. ...+...+- .++.-.-..++||||..++.........
T Consensus 24 feigr~LgkgkFG~vYlarekks~~I----valKVlfKsqi~~~~v~~ql--rREiEIqs~L~hpnilrlY~~fhd~~ri 97 (281)
T KOG0580|consen 24 FEIGRPLGKGKFGNVYLAREKKSLFI----VALKVLFKSQILKTQVEHQL--RREIEIQSHLRHPNILRLYGYFHDSKRI 97 (281)
T ss_pred ccccccccCCccccEeEeeeccCCcE----EEEeeeeHHHHHHhcchhhh--hheeEeecccCCccHHhhhhheecccee
Confidence 44444443 5 489999998543333 4444431 111222222 2223334566999999766654433333
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
+ +.+||..+|+|...|.. ....+++..+..|++|++.||.|||.++||||||||+|+|++..|
T Consensus 98 y----------------LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~ 161 (281)
T KOG0580|consen 98 Y----------------LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAG 161 (281)
T ss_pred E----------------EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCC
Confidence 3 37999999999999974 344578879999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+|++|||-+-...
T Consensus 162 ~lkiAdfGwsV~~p------------------------------------------------------------------ 175 (281)
T KOG0580|consen 162 ELKIADFGWSVHAP------------------------------------------------------------------ 175 (281)
T ss_pred CeeccCCCceeecC------------------------------------------------------------------
Confidence 99999999653311
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
...-.+.|||.-|.+||...+..++..+|+|+||++.||+|
T Consensus 176 ---------------------------------------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yefl 216 (281)
T KOG0580|consen 176 ---------------------------------------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFL 216 (281)
T ss_pred ---------------------------------------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHH
Confidence 00012689999999999999999999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhc-cccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDL-RDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
.+ |.+.. ....++.+ +.+...| ...+...+++|.+||.++|.+|.+..|++.|||+..
T Consensus 217 vg~ppFes~~-~~etYkrI~k~~~~~p--~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 217 VGLPPFESQS-HSETYKRIRKVDLKFP--STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred hcCCchhhhh-hHHHHHHHHHccccCC--cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 75 66655 33334433 3333334 445788999999999999999999999999999965
No 235
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.95 E-value=5.4e-28 Score=277.29 Aligned_cols=253 Identities=14% Similarity=0.089 Sum_probs=200.7
Q ss_pred CchhHHHhhhccccceeeeCCCCCccccccccccc-cccccccCchh--hHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 210 GFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDT-KAFVTTTMPSD--AALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 210 ~f~~~~~~~~~~g~Gvv~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
-|-.|..+-..+-+-+||||-.. +.+-++|- .++...-..+. ..+-..++.||..++||||++.++.-+...+
T Consensus 40 Ry~k~~evLGrGafKtVYka~De----~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n 115 (632)
T KOG0584|consen 40 RYLKFDEVLGRGAFKTVYKAFDE----EEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDN 115 (632)
T ss_pred ceeehhhhcccccceeeeecccc----ccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCC
Confidence 45567777777778899999983 33444443 33332222222 2455667788999999999998877665444
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcC--ccccCCCCCCeEEcc
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG--VTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~g--IvHrDLKP~Nill~~ 364 (1092)
.. .+.+.|.+-.|+|++|+++.+ .++.+-++.+++|||.||.|||++. |||||||.+||+|+.
T Consensus 116 ~~--------------in~iTEL~TSGtLr~Y~kk~~-~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG 180 (632)
T KOG0584|consen 116 KT--------------INFITELFTSGTLREYRKKHR-RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG 180 (632)
T ss_pred ce--------------eeeeeecccCCcHHHHHHHhc-cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC
Confidence 22 234788999999999998876 4677689999999999999999985 999999999999985
Q ss_pred -CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCc
Q 001366 365 -SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANE 443 (1092)
Q Consensus 365 -~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1092)
-|.|||.|+|||.....
T Consensus 181 ~~G~VKIGDLGLAtl~r~-------------------------------------------------------------- 198 (632)
T KOG0584|consen 181 NLGEVKIGDLGLATLLRK-------------------------------------------------------------- 198 (632)
T ss_pred CcCceeecchhHHHHhhc--------------------------------------------------------------
Confidence 49999999999987541
Q ss_pred cccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHH
Q 001366 444 SDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFF 523 (1092)
Q Consensus 444 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ 523 (1092)
....+.+|||.|||||++. ..|+..+||||||+.+.
T Consensus 199 -------------------------------------------s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmL 234 (632)
T KOG0584|consen 199 -------------------------------------------SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCML 234 (632)
T ss_pred -------------------------------------------cccceeccCccccChHHHh-hhcchhhhhhhhhHHHH
Confidence 0112679999999999887 68999999999999999
Q ss_pred HHcCC---CCcHHHHHHHHHhccccCCCCCCCC-CChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 524 ELFGR---FDSERALAAAMSDLRDRILPPSFLS-ENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 524 ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
||+|+ |.--....++++.+..++.|..|.. ..|+.+.||.+||.. .+.|||+.|+|.||||...
T Consensus 235 EMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 235 EMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred HHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 99985 4444567788888888888877654 458899999999999 8999999999999999875
No 236
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=5.7e-26 Score=237.49 Aligned_cols=310 Identities=16% Similarity=0.258 Sum_probs=258.2
Q ss_pred CCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCccccccee
Q 001366 744 PTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAV 823 (1092)
Q Consensus 744 ~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~ 823 (1092)
+..+++.|.++++++.-. ..|.+|.+.|..++.......+.+++.|.+.+||.+.+ ..+...
T Consensus 124 tsrivssFk~~t~~~~lv-----------re~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Es-------g~CL~~ 185 (481)
T KOG0300|consen 124 TSRIVSSFKDGTVKFRLV-----------RELEGHKDGIWHVAADSTQPICGTASADHTARIWSLES-------GACLAT 185 (481)
T ss_pred cchheeeecCCceeEeeh-----------hhhcccccceeeehhhcCCcceeecccccceeEEeecc-------ccceee
Confidence 344567787887665321 24679999999999988888999999999999999986 456667
Q ss_pred eecCCCCeEEEEEecCCCCEEEEEECCCcEEEEE------CCC------------------------------C----ce
Q 001366 824 EMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWD------ACT------------------------------G----QT 863 (1092)
Q Consensus 824 ~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD------~~t------------------------------g----~~ 863 (1092)
..+|.+.|+||+|++. +.+++++|.|++..||. +.. + .+
T Consensus 186 Y~GH~GSVNsikfh~s-~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvP 264 (481)
T KOG0300|consen 186 YTGHTGSVNSIKFHNS-GLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVP 264 (481)
T ss_pred ecccccceeeEEeccc-cceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeee
Confidence 7899999999999997 99999999999999996 111 0 24
Q ss_pred EEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEE
Q 001366 864 VSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYD 942 (1092)
Q Consensus 864 i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwD 942 (1092)
+..|++|...|.+.+|.. .+..++++|+|.+..+||++++..+..+. |....+-++-+|.. .++++++.|.+.++||
T Consensus 265 l~~ltgH~~vV~a~dWL~-gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQ-rLVvTsSrDtTFRLWD 342 (481)
T KOG0300|consen 265 LMRLTGHRAVVSACDWLA-GGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQ-RLVVTSSRDTTFRLWD 342 (481)
T ss_pred eeeeeccccceEehhhhc-CcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcc-eEEEEeccCceeEecc
Confidence 567889999999999998 88999999999999999999999999987 56778888889988 4999999999999999
Q ss_pred cCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEE
Q 001366 943 LRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIA 1022 (1092)
Q Consensus 943 lr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~la 1022 (1092)
+|..-..+.+++||...|+++.|..+..+++||.|.+|+|||+++. ..++.++. -..+++.++.+..+..||
T Consensus 343 FReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNM-------RsplATIR-tdS~~NRvavs~g~~iIA 414 (481)
T KOG0300|consen 343 FREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNM-------RSPLATIR-TDSPANRVAVSKGHPIIA 414 (481)
T ss_pred chhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeeccc-------cCcceeee-cCCccceeEeecCCceEE
Confidence 9976667889999999999999998889999999999999999964 33455554 356789999999888999
Q ss_pred EEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCC--CEEEEEecCCeEEEEEcC
Q 001366 1023 CGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRS--DMVVAANSSGCIKVLQMV 1092 (1092)
Q Consensus 1023 sgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~--~~Lasgs~DG~V~vW~lv 1092 (1092)
.--++..|++||++... +...+ .....+|...|++++|..+- +.|.++|.|..+.=|++.
T Consensus 415 iPhDNRqvRlfDlnG~R-laRlP---------rtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in 476 (481)
T KOG0300|consen 415 IPHDNRQVRLFDLNGNR-LARLP---------RTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKIN 476 (481)
T ss_pred eccCCceEEEEecCCCc-cccCC---------cccccccceeeeeeeccccCcccccccccccceeeeeEec
Confidence 99999999999987433 32221 22346888999999998653 568899999999999874
No 237
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.95 E-value=1.8e-27 Score=262.77 Aligned_cols=244 Identities=13% Similarity=0.065 Sum_probs=173.6
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..+|.|+||+|.... ...+..++.|+..............++..++....|||++..+.....+. .
T Consensus 4 g~G~~g~v~~~~~~~--~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~----------~-- 69 (257)
T cd05115 4 GSGNFGCVKKGVYKM--RKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEA----------L-- 69 (257)
T ss_pred CCCCcccEEEEEEec--CCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCC----------e--
Confidence 456889999986421 11123455555543333323344556667888899999998765432111 1
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
..+|||++|++|.+++......++..+++.++.||+.||.|||++||+||||||+||+++.++.+|++|||+++.
T Consensus 70 -----~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~ 144 (257)
T cd05115 70 -----MLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKA 144 (257)
T ss_pred -----EEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCcccc
Confidence 138999999999999976656788889999999999999999999999999999999999999999999998875
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+......
T Consensus 145 ~~~~~~~------------------------------------------------------------------------- 151 (257)
T cd05115 145 LGADDSY------------------------------------------------------------------------- 151 (257)
T ss_pred ccCCccc-------------------------------------------------------------------------
Confidence 4310000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~ 534 (1092)
....+...++..|+|||.+.+..++.++|||||||++|||++ + |.....
T Consensus 152 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 204 (257)
T cd05115 152 ---------------------------YKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG 204 (257)
T ss_pred ---------------------------eeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH
Confidence 000001123456999999988889999999999999999985 4 322222
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
. ..+..+.....++.....++++.+++..||.++|.+||++.+|++.
T Consensus 205 ~-~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~ 251 (257)
T cd05115 205 P-EVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEER 251 (257)
T ss_pred H-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 2 2233333333333344557889999999999999999999999764
No 238
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.95 E-value=9.2e-28 Score=271.14 Aligned_cols=254 Identities=14% Similarity=0.121 Sum_probs=183.4
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+.+.++ +.|+||++... ..+..++.|...... .........+..+++...|||++..++....+...+
T Consensus 20 ~y~~~~~lg~g~~g~v~~~~~~----~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~-- 92 (297)
T cd06656 20 KYTRFEKIGQGASGTVYTAIDI----ATGQEVAIKQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW-- 92 (297)
T ss_pred hceeeeeeccCCCeEEEEEEEC----CCCCEEEEEEEecCc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEE--
Confidence 466655554 67999999752 224555655443222 222233344556778889999998766544332222
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
.+|+|++|++|.+++... .++..+++.++.|++.+|.|||+.||+||||||+||+++.++.+++
T Consensus 93 --------------lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l 156 (297)
T cd06656 93 --------------VVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKL 156 (297)
T ss_pred --------------EeecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEE
Confidence 389999999999999654 4677789999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||++.......
T Consensus 157 ~Dfg~~~~~~~~~------------------------------------------------------------------- 169 (297)
T cd06656 157 TDFGFCAQITPEQ------------------------------------------------------------------- 169 (297)
T ss_pred CcCccceEccCCc-------------------------------------------------------------------
Confidence 9999876532100
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC--
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR-- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~-- 528 (1092)
.......+++.|+|||.+.+..++.++|||||||++|+|+++
T Consensus 170 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~ 213 (297)
T cd06656 170 ------------------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 213 (297)
T ss_pred ------------------------------------cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 000134578889999999998899999999999999999986
Q ss_pred -CCcHHHHHHHHHhccccCCC-CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhccc
Q 001366 529 -FDSERALAAAMSDLRDRILP-PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1092)
Q Consensus 529 -f~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~~~ 592 (1092)
|..................+ ......++.+.+|+.+||.++|.+||++.++++||||...+...
T Consensus 214 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~ 279 (297)
T cd06656 214 PYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLS 279 (297)
T ss_pred CCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccccc
Confidence 43333322222222222111 12234567788999999999999999999999999998765443
No 239
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.95 E-value=1.6e-27 Score=265.87 Aligned_cols=244 Identities=16% Similarity=0.138 Sum_probs=175.8
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.++.|+||+|.... .+..++.|+...............+..++....|||++...+....+...+
T Consensus 14 ~g~~~~vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~----------- 78 (277)
T cd06642 14 KGSFGEVYKGIDNR----TKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLW----------- 78 (277)
T ss_pred CCCCeeEEEEEEcC----CCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceE-----------
Confidence 35679999997532 234455555432222222233445666778889999998666544322222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
++|||+.|++|.+++... .++...++.++.||++||.|||++||+|+||||+||+++.++.++++|||+++.+
T Consensus 79 -----lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06642 79 -----IIMEYLGGGSALDLLKPG--PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQL 151 (277)
T ss_pred -----EEEEccCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccc
Confidence 489999999999998653 5677789999999999999999999999999999999999999999999987654
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
....
T Consensus 152 ~~~~---------------------------------------------------------------------------- 155 (277)
T cd06642 152 TDTQ---------------------------------------------------------------------------- 155 (277)
T ss_pred cCcc----------------------------------------------------------------------------
Confidence 3100
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcHHHH--HH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERAL--AA 537 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~~~~--~~ 537 (1092)
.......|+..|+|||.+.+..++.++|+|||||++|||+++..+.... ..
T Consensus 156 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~ 208 (277)
T cd06642 156 ---------------------------IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR 208 (277)
T ss_pred ---------------------------hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh
Confidence 0000235778899999999988999999999999999999974332111 11
Q ss_pred HHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 538 AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 538 ~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
....+.....+......+..+.+|+.+||+.+|.+||++.++++||||...
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 209 VLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred HHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 111111111222222346778899999999999999999999999999664
No 240
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.95 E-value=1.9e-26 Score=240.97 Aligned_cols=292 Identities=15% Similarity=0.235 Sum_probs=235.5
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC---------CCCcccccce--eeecCCCCeEEEEEecCCCC
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALF---------NDSVDVYYPA--VEMSNRSKLSCVCWNNYIKN 842 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~---------~~~~~~~~~~--~~~~h~~~V~~v~~sp~~~~ 842 (1092)
-+..|..++.+.+|+|||.++||||.|..|+|+|+.... .+..+...|+ ....|...|+++.|+|. ..
T Consensus 107 ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPr-e~ 185 (430)
T KOG0640|consen 107 YLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPR-ET 185 (430)
T ss_pred EEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecch-hh
Confidence 456899999999999999999999999999999987311 1122233333 35679999999999998 89
Q ss_pred EEEEEECCCcEEEEECCCCce---EEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe----cCCc
Q 001366 843 YLASADYDGVVKLWDACTGQT---VSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK----NIAN 915 (1092)
Q Consensus 843 ~LaSgs~DgtV~IWD~~tg~~---i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~----~~~~ 915 (1092)
+|++|+.|++|++||..+... .+.|. ...+|.++.|+| .|.+|+.|.+..++++||+++-+|...-. |.+.
T Consensus 186 ILiS~srD~tvKlFDfsK~saKrA~K~~q-d~~~vrsiSfHP-sGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~a 263 (430)
T KOG0640|consen 186 ILISGSRDNTVKLFDFSKTSAKRAFKVFQ-DTEPVRSISFHP-SGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGA 263 (430)
T ss_pred eEEeccCCCeEEEEecccHHHHHHHHHhh-ccceeeeEeecC-CCceEEEecCCCceeEEeccceeEeeecCcccccccc
Confidence 999999999999999876432 23332 457899999999 89999999999999999999988765543 6678
Q ss_pred eEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCC-CCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCC
Q 001366 916 VCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHE-KAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGP 993 (1092)
Q Consensus 916 V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~-~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~ 993 (1092)
|++|.+++.++ +.++|+.||.|++||--+.+.....-.+|. ..|++..|. +++++++.+.|..+++|.+.
T Consensus 264 i~~V~Ys~t~~-lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~------- 335 (430)
T KOG0640|consen 264 ITQVRYSSTGS-LYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEIS------- 335 (430)
T ss_pred eeEEEecCCcc-EEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeec-------
Confidence 99999999995 999999999999999887765434445675 478999998 88999999999999999998
Q ss_pred CCCceeEEEcCC--CCC---eEEEEEecCCCEEEEEec-CCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEE
Q 001366 994 STNACSLTFSGH--TNE---KNFVGLSTADGYIACGSE-SNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSS 1067 (1092)
Q Consensus 994 ~~~~~~~~l~~h--~~~---V~~v~~spdg~~lasgs~-Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~s 1067 (1092)
++.++.++.|- ++. -+...|+....|++.-.+ .+.+.-||..++..+.... -+|++.|..
T Consensus 336 -t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~s-------------lgHn~a~R~ 401 (430)
T KOG0640|consen 336 -TGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLS-------------LGHNGAVRW 401 (430)
T ss_pred -CCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcc-------------cCCCCCceE
Confidence 45667777653 111 123457777778776654 5789999988776655443 578999999
Q ss_pred EEEeCCCCEEEEEecCCeEEEEE
Q 001366 1068 VCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1068 va~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
+.-+|.+.-+.||+.|-.+++|-
T Consensus 402 i~HSP~~p~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 402 IVHSPVEPAFMTCSDDFRARFWY 424 (430)
T ss_pred EEeCCCCCceeeecccceeeeee
Confidence 99999999999999999999995
No 241
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.95 E-value=2.4e-27 Score=262.54 Aligned_cols=247 Identities=17% Similarity=0.166 Sum_probs=175.6
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchh--------hHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD--------AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
.++.|.||+|...+ .+..++.|.+........ .....++..++....|||++.+......+...+
T Consensus 10 ~g~~~~v~~a~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~--- 82 (267)
T cd06628 10 SGSFGSVYLGMNAS----SGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLN--- 82 (267)
T ss_pred cCCCeEEEEEEecC----CCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccE---
Confidence 35789999997532 134444443322111111 122334556677889999998766544332222
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
.+|||+.|++|.++++..+ .++...+..++.||+.||+|||++||+||||||+||++++++.+|++
T Consensus 83 -------------lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~ 148 (267)
T cd06628 83 -------------IFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKIS 148 (267)
T ss_pred -------------EEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEec
Confidence 3799999999999997764 46677899999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++.+.......
T Consensus 149 dfg~~~~~~~~~~~~----------------------------------------------------------------- 163 (267)
T cd06628 149 DFGISKKLEANSLST----------------------------------------------------------------- 163 (267)
T ss_pred ccCCCcccccccccC-----------------------------------------------------------------
Confidence 999887654100000
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR--- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~--- 528 (1092)
..........|+..|+|||.+.+..++.++|+|||||++|+|+++
T Consensus 164 --------------------------------~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p 211 (267)
T cd06628 164 --------------------------------KTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHP 211 (267)
T ss_pred --------------------------------CccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCC
Confidence 000001134578889999999988899999999999999999986
Q ss_pred CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 529 FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 529 f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
|.......... .+.....+......+..+.+|+.+||+++|.+||++.+|++||||
T Consensus 212 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 212 FPDCTQLQAIF-KIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred CCCccHHHHHH-HHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 43333322222 222222333334457888999999999999999999999999997
No 242
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.95 E-value=1.4e-27 Score=264.50 Aligned_cols=250 Identities=16% Similarity=0.183 Sum_probs=176.3
Q ss_pred CchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 210 GFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 210 ~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
+...|.+.+.++ +.|.||+|.... .+..++.|+....... ......++...+...+|||++.+......+...
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~----~~~~~aik~~~~~~~~-~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~ 81 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLH----TGELAAVKIIKLEPGD-DFSLIQQEIFMVKECKHCNIVAYFGSYLSREKL 81 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECC----CCeEEEEEEEecCccc-hHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Confidence 344566666664 679999998622 2344555554322111 122233455677888999999876554433222
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~ 367 (1092)
+ .+|||++|++|.+++...+ .++..++..++.|++.||+|||++||+||||||+||+++.++.
T Consensus 82 ~----------------iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~ 144 (267)
T cd06646 82 W----------------ICMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGD 144 (267)
T ss_pred E----------------EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCC
Confidence 2 3799999999999997654 5677799999999999999999999999999999999999999
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+|++|||+++......
T Consensus 145 ~~l~dfg~~~~~~~~~---------------------------------------------------------------- 160 (267)
T cd06646 145 VKLADFGVAAKITATI---------------------------------------------------------------- 160 (267)
T ss_pred EEECcCccceeecccc----------------------------------------------------------------
Confidence 9999999887643100
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc---CCCCCccccchhhhHHHHH
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS---GGVCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~t~~sDIwSLGvll~e 524 (1092)
.......|+..|+|||.+. ...++.++|+|||||++||
T Consensus 161 ---------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~e 201 (267)
T cd06646 161 ---------------------------------------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIE 201 (267)
T ss_pred ---------------------------------------cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHH
Confidence 0001345778899999985 3457889999999999999
Q ss_pred HcCCCCcH---HHHHHHHHhccccCCCCCC---CCCChhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001366 525 LFGRFDSE---RALAAAMSDLRDRILPPSF---LSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1092)
Q Consensus 525 ll~~f~~~---~~~~~~~~~~~~~~~p~~~---~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~ 584 (1092)
|+++..+. ...............++.+ ...++.+.+|+.+||..+|++||++++||+|+|
T Consensus 202 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 202 LAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 99863322 1111111111111122222 234678899999999999999999999999986
No 243
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.95 E-value=1.6e-27 Score=266.57 Aligned_cols=248 Identities=16% Similarity=0.105 Sum_probs=167.8
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..+|.|.||+|.... .+..++.|+..... ........+...+... .|||++............. ....
T Consensus 25 g~g~~~~v~~~~~~~----~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~---~~~~-- 93 (282)
T cd06636 25 GNGTYGQVYKGRHVK----TGQLAAIKVMDVTE--DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG---HDDQ-- 93 (282)
T ss_pred ccCCCeEEEEEEEcC----CCcEEEEEEEecCh--HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC---CCCE--
Confidence 335789999988632 24445555542221 1112222223333333 6999887655433211110 0011
Q ss_pred ccccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
..++|||+.+++|.+++... +..+++..++.++.||+.||+|||++||+||||||+||+++.++.++++|||++
T Consensus 94 -----~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~ 168 (282)
T cd06636 94 -----LWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVS 168 (282)
T ss_pred -----EEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcch
Confidence 12489999999999999653 345777788999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
.......
T Consensus 169 ~~~~~~~------------------------------------------------------------------------- 175 (282)
T cd06636 169 AQLDRTV------------------------------------------------------------------------- 175 (282)
T ss_pred hhhhccc-------------------------------------------------------------------------
Confidence 6533100
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc-----CCCCCccccchhhhHHHHHHcCCCCc
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS-----GGVCTTSSNIYSLGVLFFELFGRFDS 531 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-----~~~~t~~sDIwSLGvll~ell~~f~~ 531 (1092)
.......|+..|+|||.+. +..++.++|||||||++|||+++..+
T Consensus 176 ------------------------------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p 225 (282)
T cd06636 176 ------------------------------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPP 225 (282)
T ss_pred ------------------------------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCC
Confidence 0001346788999999986 35688999999999999999987333
Q ss_pred H---HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 532 E---RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 532 ~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
. ..........+...........++.+.+|+.+||..+|.+||++.|||+||||
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 226 LCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred ccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 2 22222211111111111222356788999999999999999999999999997
No 244
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.95 E-value=8.4e-28 Score=277.03 Aligned_cols=242 Identities=17% Similarity=0.096 Sum_probs=171.3
Q ss_pred CCchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 209 SGFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 209 ~~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
+-+.+|.++..++ ..++|-+..... ....-++|+......+.+ -.+..++.-..|||++++.+....+..
T Consensus 319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~----t~~~~~vkii~~~~~~~~----~e~~~~~~~~~h~niv~~~~v~~~~~~ 390 (612)
T KOG0603|consen 319 PFTESYEFREELGEGSFSAVKYCESSP----TDQEPAVKIISKRADDNQ----DEIPISLLVRDHPNIVKSHDVYEDGKE 390 (612)
T ss_pred CcchhhccccccCCCCccceeeeeccc----cccchhheeccccccccc----cccchhhhhcCCCcceeecceecCCce
Confidence 3344666666632 234554444422 233444445433211111 112234556689999976665443333
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE-ccC
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL-LQS 365 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill-~~~ 365 (1092)
.+ .+||++.|+-|.+.+....... .++..|++||+.||+|||++|||||||||+|||+ ...
T Consensus 391 ~~----------------~v~e~l~g~ell~ri~~~~~~~--~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~ 452 (612)
T KOG0603|consen 391 IY----------------LVMELLDGGELLRRIRSKPEFC--SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSA 452 (612)
T ss_pred ee----------------eeehhccccHHHHHHHhcchhH--HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCC
Confidence 33 3899999999999986654322 5788999999999999999999999999999999 588
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
++++|+|||.++.....
T Consensus 453 g~lrltyFG~a~~~~~~--------------------------------------------------------------- 469 (612)
T KOG0603|consen 453 GHLRLTYFGFWSELERS--------------------------------------------------------------- 469 (612)
T ss_pred CcEEEEEechhhhCchh---------------------------------------------------------------
Confidence 99999999988775411
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL 525 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~el 525 (1092)
+.+.+-|..|.|||++....||.+|||||||++||+|
T Consensus 470 -------------------------------------------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~M 506 (612)
T KOG0603|consen 470 -------------------------------------------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEM 506 (612)
T ss_pred -------------------------------------------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHH
Confidence 1123456779999999999999999999999999999
Q ss_pred cCCCC---cHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 526 FGRFD---SERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 526 l~~f~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
|+|.. ....-.+++..+.. |+.-...+...++|+.+||+.||.+||++.+++.||||
T Consensus 507 L~G~tp~~~~P~~~ei~~~i~~---~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 507 LTGRTLFAAHPAGIEIHTRIQM---PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred HhCCCccccCCchHHHHHhhcC---CccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 99732 22222333333332 22225668889999999999999999999999999999
No 245
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.95 E-value=1.5e-27 Score=270.72 Aligned_cols=259 Identities=18% Similarity=0.183 Sum_probs=179.8
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchh-hHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+.+.+ ++.|+||+|... ..++.++.|++........ .....++..++...+|+|++.+..........
T Consensus 8 ~y~~~~~ig~g~~~~v~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~-- 81 (309)
T cd07845 8 EFEKLNRIGEGTYGIVYRARDT----TSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLD-- 81 (309)
T ss_pred ceeEeeeeeecCCEEEEEEEEC----CCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCC--
Confidence 34444433 467999999863 2345566655432222111 12233566778888999999866553321100
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
. ...+|||+++ +|.+++......++..+++.++.||+.||.|||++||+||||||+||+++.++.+|
T Consensus 82 -----~-------~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~k 148 (309)
T cd07845 82 -----S-------IFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLK 148 (309)
T ss_pred -----e-------EEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEE
Confidence 0 1137899875 89999977656788889999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
++|||+++......
T Consensus 149 L~dfg~~~~~~~~~------------------------------------------------------------------ 162 (309)
T cd07845 149 IADFGLARTYGLPA------------------------------------------------------------------ 162 (309)
T ss_pred ECccceeeecCCcc------------------------------------------------------------------
Confidence 99999887643100
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~ 528 (1092)
...+...++.+|+|||.+.+ ..++.++|||||||++|||+++
T Consensus 163 -------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g 205 (309)
T cd07845 163 -------------------------------------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAH 205 (309)
T ss_pred -------------------------------------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhC
Confidence 00012345788999999876 5579999999999999999986
Q ss_pred ---CCcHHHHHHHHHhcc--cc------------------CCCC--------CCCCCChhHHHHHHhccccCCCCCCCHH
Q 001366 529 ---FDSERALAAAMSDLR--DR------------------ILPP--------SFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~--~~------------------~~p~--------~~~~~~~~~~~li~~lL~~dP~~Rpsa~ 577 (1092)
|.............. .. .++. .+...++.+.+|+.+||++||++|||+.
T Consensus 206 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~ 285 (309)
T cd07845 206 KPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAE 285 (309)
T ss_pred CCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHH
Confidence 433322222211111 00 0010 0122467788999999999999999999
Q ss_pred HHhhhhhhhhhhccch
Q 001366 578 EILQSEVTNEFQEVCA 593 (1092)
Q Consensus 578 eiL~~~~~~~~~~~~~ 593 (1092)
++|+||||.+.+.+..
T Consensus 286 ~il~h~~f~~~~~~~~ 301 (309)
T cd07845 286 EALESSYFKEKPLPCE 301 (309)
T ss_pred HHhcChhhccCCCCCC
Confidence 9999999988766544
No 246
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.95 E-value=1.9e-27 Score=265.44 Aligned_cols=249 Identities=15% Similarity=0.130 Sum_probs=180.7
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ ++.|.||+|.... .+..++.|+............-..+..++....||+++.+......+...+
T Consensus 6 y~~~~~lg~g~~~~vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~--- 78 (277)
T cd06640 6 FTKLERIGKGSFGEVFKGIDNR----TQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLW--- 78 (277)
T ss_pred hhhhhhcccCCCeEEEEEEEcc----CCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE---
Confidence 4444443 4679999997632 244555555432222222333444566777889999998877765444333
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
++|||+.|++|.+++... .++..++..++.|++.||+|+|++|++|+||+|+||+++.++.++++
T Consensus 79 -------------lv~e~~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~ 143 (277)
T cd06640 79 -------------IIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLA 143 (277)
T ss_pred -------------EEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEc
Confidence 389999999999999754 46777899999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||++.......
T Consensus 144 dfg~~~~~~~~~-------------------------------------------------------------------- 155 (277)
T cd06640 144 DFGVAGQLTDTQ-------------------------------------------------------------------- 155 (277)
T ss_pred ccccceeccCCc--------------------------------------------------------------------
Confidence 999886543100
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCc
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS 531 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~ 531 (1092)
.......++.+|+|||.+.+..++.++|+|||||++|||+++..+
T Consensus 156 -----------------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p 200 (277)
T cd06640 156 -----------------------------------IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 200 (277)
T ss_pred -----------------------------------cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCC
Confidence 000123577889999999988899999999999999999997322
Q ss_pred ---HHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 532 ---ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 532 ---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
........ .+.....|......++.+.+|+.+||+.+|.+||++.++++|+||...
T Consensus 201 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 201 NSDMHPMRVLF-LIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred CCCcChHhHhh-hhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 22221111 111112222233446778899999999999999999999999999664
No 247
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.95 E-value=4.5e-27 Score=260.55 Aligned_cols=244 Identities=14% Similarity=0.113 Sum_probs=173.0
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|+||+|.....-.. ...++.|+............-.++..++...+|||++.+......+...+
T Consensus 14 ~g~~g~vy~~~~~~~~~~-~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~----------- 81 (266)
T cd05033 14 GGEFGEVCRGRLKLPGKK-EIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM----------- 81 (266)
T ss_pred CCccceEEEEEEccCCCC-cceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE-----------
Confidence 367899999976431111 23444444432222222223344666788889999998665543222222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+|||+.|++|.+++......++..+++.++.|++.||.|||++||+||||||+||+++.++.+|++|||+++..
T Consensus 82 -----iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 82 -----IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred -----EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 379999999999999776557888899999999999999999999999999999999999999999999998764
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
......
T Consensus 157 ~~~~~~-------------------------------------------------------------------------- 162 (266)
T cd05033 157 EDSEAT-------------------------------------------------------------------------- 162 (266)
T ss_pred cccccc--------------------------------------------------------------------------
Confidence 310000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~ 535 (1092)
.. .....++..|+|||.+.+..++.++|||||||++|||++ + |.....
T Consensus 163 --------------------------~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~- 214 (266)
T cd05033 163 --------------------------YT-TKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN- 214 (266)
T ss_pred --------------------------ee-ccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH-
Confidence 00 001123567999999998889999999999999999986 4 322221
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
......+.....++.....++.+.+|+.+||..+|.+||++.+|+++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 215 QDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 22222222222223334567889999999999999999999999875
No 248
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.95 E-value=2.5e-27 Score=261.56 Aligned_cols=237 Identities=15% Similarity=0.089 Sum_probs=164.7
Q ss_pred hccccceeeeCCCCCcc---ccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCC
Q 001366 219 TLKGKGIVCRGPPLNAF---KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
..+|.|.||+|...+.- ......++.|+.... ..........+..++....|||++.+......+...+
T Consensus 4 g~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~------- 75 (258)
T cd05078 4 GQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS-HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESI------- 75 (258)
T ss_pred CcccchhheeeeecccccccccccchhhHHhhcch-hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcE-------
Confidence 35688999999863210 001122333333211 1122233345566777889999998766655332222
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc--------
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ-------- 367 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~-------- 367 (1092)
.+|||+.|++|.++|...+..++...++.++.||+.||+|||++||+||||||+||+++.++.
T Consensus 76 ---------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~ 146 (258)
T cd05078 76 ---------MVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPF 146 (258)
T ss_pred ---------EEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCce
Confidence 379999999999999877767888899999999999999999999999999999999988776
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
++++|||++.....
T Consensus 147 ~~l~d~g~~~~~~~------------------------------------------------------------------ 160 (258)
T cd05078 147 IKLSDPGISITVLP------------------------------------------------------------------ 160 (258)
T ss_pred EEecccccccccCC------------------------------------------------------------------
Confidence 46777765533210
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHc
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell 526 (1092)
.....++..|+|||.+.+ ..++.++|||||||++|||+
T Consensus 161 -----------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~ 199 (258)
T cd05078 161 -----------------------------------------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIF 199 (258)
T ss_pred -----------------------------------------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHH
Confidence 002346777999999987 45799999999999999999
Q ss_pred CC-CCcHHH--HHHHHHhcc-ccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 527 GR-FDSERA--LAAAMSDLR-DRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 527 ~~-f~~~~~--~~~~~~~~~-~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
++ ..+... ......... ...+|+ ..++++.+|+.+||+++|++|||+++|++.
T Consensus 200 ~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 200 SGGDKPLSALDSQKKLQFYEDRHQLPA---PKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred cCCCCChhhccHHHHHHHHHccccCCC---CCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 86 222111 111111111 112222 345789999999999999999999999874
No 249
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.95 E-value=9.6e-27 Score=237.12 Aligned_cols=281 Identities=17% Similarity=0.259 Sum_probs=236.1
Q ss_pred cCCCCCEEEEEEcC---CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCc
Q 001366 776 NNSANVICSISFDR---DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV 852 (1092)
Q Consensus 776 ~~h~~~V~sl~fsp---dg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dgt 852 (1092)
.+|+.+|-.++|+| +|-+|++++.|+.=.+-+-++ ........+|++.|...+.+.+ ....|+++.|=+
T Consensus 11 ~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~t-------gdwigtfeghkgavw~~~l~~n-a~~aasaaadft 82 (334)
T KOG0278|consen 11 HGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDT-------GDWIGTFEGHKGAVWSATLNKN-ATRAASAAADFT 82 (334)
T ss_pred cCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCC-------CCcEEeeeccCcceeeeecCch-hhhhhhhcccch
Confidence 38999999999985 899999999998876654332 2334566789999999999886 778899999999
Q ss_pred EEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCc-eeeeEe-cCCceEEEEEccCCCeEEE
Q 001366 853 VKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN-SLATIK-NIANVCCVQFSAHSSHLLA 930 (1092)
Q Consensus 853 V~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~-~l~~l~-~~~~V~sl~fsp~~~~~la 930 (1092)
.+|||.-+|..+.+|. |..-|.+++|+. +.+.|++|+.+..++|||++..+ +...+. |.+.|..+-|.-... .++
T Consensus 83 akvw~a~tgdelhsf~-hkhivk~~af~~-ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~-~iL 159 (334)
T KOG0278|consen 83 AKVWDAVTGDELHSFE-HKHIVKAVAFSQ-DSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDK-CIL 159 (334)
T ss_pred hhhhhhhhhhhhhhhh-hhheeeeEEecc-cchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCc-eEE
Confidence 9999999999999986 999999999999 88999999999999999998764 334444 678899999987764 666
Q ss_pred EEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeE
Q 001366 931 FGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKN 1010 (1092)
Q Consensus 931 tgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~ 1010 (1092)
+++.|++|++||.|++... .++. -..+|+++..+.++.+++....+.|++||... ...++.+.. ...|.
T Consensus 160 SSadd~tVRLWD~rTgt~v-~sL~-~~s~VtSlEvs~dG~ilTia~gssV~Fwdaks--------f~~lKs~k~-P~nV~ 228 (334)
T KOG0278|consen 160 SSADDKTVRLWDHRTGTEV-QSLE-FNSPVTSLEVSQDGRILTIAYGSSVKFWDAKS--------FGLLKSYKM-PCNVE 228 (334)
T ss_pred eeccCCceEEEEeccCcEE-EEEe-cCCCCcceeeccCCCEEEEecCceeEEecccc--------ccceeeccC-ccccc
Confidence 7799999999999998753 4433 35679999999777888888889999999983 344555553 34588
Q ss_pred EEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1011 FVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1011 ~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
+.+++|+...++||++|..++.||..++..+..+. .+|-++|.+|.|+|+|...|+|+.||+|++|+
T Consensus 229 SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~n-------------kgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQ 295 (334)
T KOG0278|consen 229 SASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYN-------------KGHFGPVHCVRFSPDGELYASGSEDGTIRLWQ 295 (334)
T ss_pred cccccCCCceEEecCcceEEEEEeccCCceeeecc-------------cCCCCceEEEEECCCCceeeccCCCceEEEEE
Confidence 89999999999999999999999999998776542 57889999999999999999999999999998
Q ss_pred c
Q 001366 1091 M 1091 (1092)
Q Consensus 1091 l 1091 (1092)
+
T Consensus 296 t 296 (334)
T KOG0278|consen 296 T 296 (334)
T ss_pred e
Confidence 6
No 250
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.95 E-value=3.2e-27 Score=261.66 Aligned_cols=236 Identities=12% Similarity=0.056 Sum_probs=162.2
Q ss_pred ccccceeeeCCCCCcccc--------ccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKE--------RRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
.++.|.||+|...+.... ....++.|+.... .......-..+..++...+|||++.++.....+...+
T Consensus 5 ~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~--- 80 (262)
T cd05077 5 RGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS-HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI--- 80 (262)
T ss_pred cCCcceEeeeecccCCCccccccchhhceeEEEeecChh-hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE---
Confidence 467899999986432211 0112233332111 1111222334456777889999998776544322222
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc----
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ---- 367 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~---- 367 (1092)
.+|||+++++|..++......++...++.++.||+.||+|||++||+||||||+|||++.++.
T Consensus 81 -------------lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~ 147 (262)
T cd05077 81 -------------MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGEC 147 (262)
T ss_pred -------------EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCC
Confidence 389999999999999776667888899999999999999999999999999999999987664
Q ss_pred ---EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 368 ---VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 368 ---vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
+|++|||++.....
T Consensus 148 ~~~~~l~d~g~~~~~~~--------------------------------------------------------------- 164 (262)
T cd05077 148 GPFIKLSDPGIPITVLS--------------------------------------------------------------- 164 (262)
T ss_pred CceeEeCCCCCCccccC---------------------------------------------------------------
Confidence 88999987654220
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc-CCCCCccccchhhhHHHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS-GGVCTTSSNIYSLGVLFF 523 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-~~~~t~~sDIwSLGvll~ 523 (1092)
.....++..|+|||.+. +..++.++|||||||+||
T Consensus 165 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~ 200 (262)
T cd05077 165 --------------------------------------------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLW 200 (262)
T ss_pred --------------------------------------------cccccccccccChhhhcCCCCCCchhHHHHHHHHHH
Confidence 00234667799999987 467899999999999999
Q ss_pred HHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 524 ELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 524 ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
||++ + |..... ... ........ +......+.+.+|+.+||+.||.+||++.+|+++
T Consensus 201 el~~~~~~p~~~~~~-~~~-~~~~~~~~-~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 201 EICYNGEIPLKDKTL-AEK-ERFYEGQC-MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred HHHhCCCCCCCCcch-hHH-HHHHhcCc-cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 9974 3 222111 111 11111111 1112235678899999999999999999999875
No 251
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=1.7e-27 Score=253.03 Aligned_cols=243 Identities=15% Similarity=0.138 Sum_probs=179.9
Q ss_pred ccceeeeCCCCCccccccccccc-cccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 222 GKGIVCRGPPLNAFKERRGMIDT-KAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
|..+|+-+.. .+.++.++. |+........-..++-++.+++-..+|+|+++.+........... |
T Consensus 28 g~~~v~~a~D----~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~----------~ 93 (369)
T KOG0665|consen 28 GAQIVVAAFD----QVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEE----------F 93 (369)
T ss_pred CCceEEecch----hhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHH----------H
Confidence 6666666665 333444444 333333334456778888999999999999987665443333221 1
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
.....+||++. .+|.+.+.. .++...+..|+.|++.|+.|+|+.||+||||||+||++..++.+|+.|||+|+.-.
T Consensus 94 ~e~y~v~e~m~-~nl~~vi~~---elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~ 169 (369)
T KOG0665|consen 94 QEVYLVMELMD-ANLCQVILM---ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTED 169 (369)
T ss_pred HhHHHHHHhhh-hHHHHHHHH---hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccC
Confidence 11223676665 588888763 46777899999999999999999999999999999999999999999999987622
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
T Consensus 170 -------------------------------------------------------------------------------- 169 (369)
T KOG0665|consen 170 -------------------------------------------------------------------------------- 169 (369)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHHH
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAA 537 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~~ 537 (1092)
+...++..++|+.|+|||++.+..|...+||||+||++.||+++ |++.....+
T Consensus 170 ------------------------~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ 225 (369)
T KOG0665|consen 170 ------------------------TDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQ 225 (369)
T ss_pred ------------------------cccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHH
Confidence 12335578999999999999998899999999999999999987 777766666
Q ss_pred HHHhcccc--------------------------------CCCCC-CC-------CCChhHHHHHHhccccCCCCCCCHH
Q 001366 538 AMSDLRDR--------------------------------ILPPS-FL-------SENPKEAGFCLWQLHPEPLSRPTTR 577 (1092)
Q Consensus 538 ~~~~~~~~--------------------------------~~p~~-~~-------~~~~~~~~li~~lL~~dP~~Rpsa~ 577 (1092)
+.+..... .+|.. |+ ......++++.+||..+|++|.+++
T Consensus 226 ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~ 305 (369)
T KOG0665|consen 226 WNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVD 305 (369)
T ss_pred HHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHH
Confidence 54333221 11211 11 1223467999999999999999999
Q ss_pred HHhhhhhhh
Q 001366 578 EILQSEVTN 586 (1092)
Q Consensus 578 eiL~~~~~~ 586 (1092)
++|.||||+
T Consensus 306 daL~HPY~~ 314 (369)
T KOG0665|consen 306 DALRHPYIK 314 (369)
T ss_pred HHhcCCeee
Confidence 999999997
No 252
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.95 E-value=2.7e-27 Score=260.05 Aligned_cols=240 Identities=14% Similarity=0.102 Sum_probs=174.2
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.++.|.||++...+ .+..++.|.+..... .....++...+...+|||++.+......+...+
T Consensus 13 ~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~----------- 74 (256)
T cd06612 13 EGSYGSVYKAIHKE----TGQVVAIKVVPVEED---LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLW----------- 74 (256)
T ss_pred CCCCeEEEEEEEcC----CCcEEEEEEeecHHH---HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEE-----------
Confidence 34679999998743 133444444422211 233444555677779999998666544332222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
++++|+.|++|.+++...+..++...++.++.||+.||.|||++||+|+||+|+||+++.++.+|++|||++...
T Consensus 75 -----l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~ 149 (256)
T cd06612 75 -----IVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQL 149 (256)
T ss_pred -----EEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhc
Confidence 389999999999999877778888899999999999999999999999999999999999999999999988764
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
.....
T Consensus 150 ~~~~~--------------------------------------------------------------------------- 154 (256)
T cd06612 150 TDTMA--------------------------------------------------------------------------- 154 (256)
T ss_pred ccCcc---------------------------------------------------------------------------
Confidence 31000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALA 536 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~ 536 (1092)
......|+..|+|||.+.+..++.++|||||||++|+|+++ |.......
T Consensus 155 ----------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~ 206 (256)
T cd06612 155 ----------------------------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR 206 (256)
T ss_pred ----------------------------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh
Confidence 00123467789999999998899999999999999999986 33222222
Q ss_pred HHHHhccccC-CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 537 AAMSDLRDRI-LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 537 ~~~~~~~~~~-~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
.......... ........+..+.+|+.+||..+|.+|||+.++|+||||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 207 AIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred hhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 2211111111 001112345678999999999999999999999999997
No 253
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.95 E-value=3.3e-27 Score=263.36 Aligned_cols=245 Identities=16% Similarity=0.105 Sum_probs=168.5
Q ss_pred ccccceeeeCCCCCccc-cccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFK-ERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.+|.|+||+|....... ..+..++.|+...............+..++....|||++.+......+...+
T Consensus 16 ~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~---------- 85 (277)
T cd05062 16 QGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL---------- 85 (277)
T ss_pred cccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeE----------
Confidence 35789999886522111 1133445544322211112222345566778889999998765543222222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCC---------CCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGH---------KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~---------~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
.+|||+.|++|.+++..... .++...++.++.|++.||+|||++||+||||||+||+++.++.+|
T Consensus 86 ------lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 86 ------VIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred ------EEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEE
Confidence 37999999999999965322 245567889999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
++|||+++........
T Consensus 160 l~dfg~~~~~~~~~~~---------------------------------------------------------------- 175 (277)
T cd05062 160 IGDFGMTRDIYETDYY---------------------------------------------------------------- 175 (277)
T ss_pred ECCCCCccccCCccee----------------------------------------------------------------
Confidence 9999988754310000
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~ 528 (1092)
.......++..|+|||.+.+..++.++|||||||++|||++ +
T Consensus 176 -------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~ 218 (277)
T cd05062 176 -------------------------------------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 218 (277)
T ss_pred -------------------------------------ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCC
Confidence 00002245677999999999889999999999999999997 3
Q ss_pred ---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|..... ............++.....++.+.+|+.+||+.+|++|||+.|+++.
T Consensus 219 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 219 EQPYQGMSN-EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 333222 22222222222333333456778999999999999999999999874
No 254
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.94 E-value=4.2e-27 Score=263.61 Aligned_cols=250 Identities=16% Similarity=0.046 Sum_probs=173.5
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..+|.|+||++.........+..++.|...............++...+....|||++.+......... ..
T Consensus 13 g~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------~~--- 82 (284)
T cd05079 13 GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG-------NG--- 82 (284)
T ss_pred CCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC-------Cc---
Confidence 34578999987642211223455555554333222223344556667888899999875544322110 00
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
...+|||++|++|.+++......++..+++.++.||+.||+|+|++||+||||||+||+++.++.+|++|||+++.
T Consensus 83 ----~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 83 ----IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred ----eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccc
Confidence 1248999999999999977655678889999999999999999999999999999999999999999999998876
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+......
T Consensus 159 ~~~~~~~------------------------------------------------------------------------- 165 (284)
T cd05079 159 IETDKEY------------------------------------------------------------------------- 165 (284)
T ss_pred cccCccc-------------------------------------------------------------------------
Confidence 4310000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcH------
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSE------ 532 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~------ 532 (1092)
........++..|+|||.+.+..++.++|||||||++|||+++..+.
T Consensus 166 ---------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~ 218 (284)
T cd05079 166 ---------------------------YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL 218 (284)
T ss_pred ---------------------------eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch
Confidence 00000234566799999999888999999999999999999742110
Q ss_pred -----------HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 533 -----------RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 533 -----------~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
.........+......+.....++.+.+|+.+||+++|.+||++.++++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 219 FLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred hhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 01111111122222233344567889999999999999999999999874
No 255
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.94 E-value=5.1e-27 Score=258.00 Aligned_cols=244 Identities=16% Similarity=0.146 Sum_probs=177.0
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|+||++...+.. ..+..++.|+..............++...+....|++++.++.....+...+
T Consensus 5 ~g~~g~v~~~~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~----------- 72 (262)
T cd00192 5 EGAFGEVYKGKLKGKD-GKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLY----------- 72 (262)
T ss_pred cCCceEEEEEEEecCC-CCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceE-----------
Confidence 4678999999885421 1134445555433333223344455566777778999998665544322222
Q ss_pred ccCCCcccccCCCCCHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 300 WIGGLRQGSSDHGVNLREWLNAR--------GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~--------~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
.+|+|+.|++|.+++... ...++..++..++.||+.||+|||++||+||||||+||+++.++.+|++
T Consensus 73 -----lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~ 147 (262)
T cd00192 73 -----LVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKIS 147 (262)
T ss_pred -----EEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEc
Confidence 389999999999999876 4668888999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||.++.......
T Consensus 148 dfg~~~~~~~~~~------------------------------------------------------------------- 160 (262)
T cd00192 148 DFGLSRDVYDDDY------------------------------------------------------------------- 160 (262)
T ss_pred ccccccccccccc-------------------------------------------------------------------
Confidence 9998876541100
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR--- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~--- 528 (1092)
........++..|+|||.+.+..++.++|||||||++|||+++
T Consensus 161 ----------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~ 206 (262)
T cd00192 161 ----------------------------------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGAT 206 (262)
T ss_pred ----------------------------------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCC
Confidence 0000133457779999999988899999999999999999973
Q ss_pred -CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 -FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 -f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|..... ......+.....++.....++.+.+++.+||..+|++||++.+++++
T Consensus 207 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 207 PYPGLSN-EEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred CCCCCCH-HHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 333322 22222222233333344557889999999999999999999999875
No 256
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.94 E-value=3.2e-27 Score=261.92 Aligned_cols=246 Identities=16% Similarity=0.140 Sum_probs=170.2
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC---ch-hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM---PS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
.++.|+||++...+ .+..++.|+...... .. ......++..++...+|||++........... ..
T Consensus 12 ~g~~g~vy~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------~~ 80 (266)
T cd06651 12 QGAFGRVYLCYDVD----TGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAE-------KT 80 (266)
T ss_pred CCCCEEEEEEEEcC----CCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCC-------CE
Confidence 35789999997532 234445544322111 11 12234455667888899999875543221100 01
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
.+ .+|+|+.|++|.+++...+ .++....+.++.||+.||+|||++||+||||||+||+++.++.+|++|||+
T Consensus 81 ~~-------l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~ 152 (266)
T cd06651 81 LT-------IFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGA 152 (266)
T ss_pred EE-------EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCC
Confidence 11 3689999999999997654 467778999999999999999999999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++.+......
T Consensus 153 ~~~~~~~~~~---------------------------------------------------------------------- 162 (266)
T cd06651 153 SKRLQTICMS---------------------------------------------------------------------- 162 (266)
T ss_pred cccccccccc----------------------------------------------------------------------
Confidence 8764310000
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcH
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
........++..|+|||.+.+..++.++|||||||++|||+++ |...
T Consensus 163 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~ 212 (266)
T cd06651 163 ------------------------------GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEY 212 (266)
T ss_pred ------------------------------CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcccc
Confidence 0001134578889999999988899999999999999999986 3332
Q ss_pred HHHHHHHHhccccCCCCCCC-CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001366 533 RALAAAMSDLRDRILPPSFL-SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1092)
Q Consensus 533 ~~~~~~~~~~~~~~~p~~~~-~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~ 586 (1092)
....... ........+.++ ..++.+.+|+ .||..+|++||+++||+.||||+
T Consensus 213 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 213 EAMAAIF-KIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred chHHHHH-HHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 2222222 222222223332 3466777887 67778999999999999999985
No 257
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.94 E-value=3.9e-27 Score=264.29 Aligned_cols=245 Identities=18% Similarity=0.224 Sum_probs=176.9
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..++.|+||++.... .+..++.|.... ..........++..+++...|||++.+.+........+
T Consensus 28 g~g~~g~v~~~~~~~----~~~~~~iK~~~~-~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~---------- 92 (285)
T cd06648 28 GEGSTGIVCIATDKS----TGRQVAVKKMDL-RKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELW---------- 92 (285)
T ss_pred ccCCCeEEEEEEECC----CCCEEEEEEEec-cchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEE----------
Confidence 335679999987521 133344433211 11112233445566788889999998776544322222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
++++|+.|++|.+++.. ..++..+++.++.||+.||+|||++||+||||||+||+++.++.++++|||.++.
T Consensus 93 ------~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~ 164 (285)
T cd06648 93 ------VVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQ 164 (285)
T ss_pred ------EEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchh
Confidence 37999999999999977 3577778999999999999999999999999999999999999999999997754
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.....
T Consensus 165 ~~~~~--------------------------------------------------------------------------- 169 (285)
T cd06648 165 VSKEV--------------------------------------------------------------------------- 169 (285)
T ss_pred hccCC---------------------------------------------------------------------------
Confidence 32100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
.......|+.+|+|||.+.+..++.++|||||||++|||+++ |.....
T Consensus 170 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~- 220 (285)
T cd06648 170 ----------------------------PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP- 220 (285)
T ss_pred ----------------------------cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-
Confidence 000134578899999999988899999999999999999986 333222
Q ss_pred HHHHHhccccCCC--CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 536 AAAMSDLRDRILP--PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 536 ~~~~~~~~~~~~p--~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
...+..+.....+ ......++.+.+|+.+||+++|.+||++.++++||||...++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 221 LQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred HHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence 2223333332211 112235678999999999999999999999999999987654
No 258
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.94 E-value=3.8e-27 Score=266.12 Aligned_cols=249 Identities=18% Similarity=0.197 Sum_probs=179.7
Q ss_pred HHhhhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCC
Q 001366 215 FVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTG 294 (1092)
Q Consensus 215 ~~~~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1092)
+.+...+|.|+||++.... .+..++.|+.... .........++...+....|||++..+.....+...+
T Consensus 26 ~~~ig~g~~g~v~~~~~~~----~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~------ 94 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKH----SGRQVAVKMMDLR-KQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELW------ 94 (297)
T ss_pred hhhcCCCCceeEEEEEEcC----CCCEEEEEEEEec-ccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEE------
Confidence 3456667889999987521 2344455443211 1122233445556677889999987666544332222
Q ss_pred CCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccc
Q 001366 295 VPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1092)
Q Consensus 295 ~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg 374 (1092)
.+|||++|++|.+++... .++...++.++.||+.||+|||++||+||||||+||+++.++.+|++|||
T Consensus 95 ----------iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg 162 (297)
T cd06659 95 ----------VLMEFLQGGALTDIVSQT--RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFG 162 (297)
T ss_pred ----------EEEecCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeech
Confidence 389999999999988653 57788999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++.+....
T Consensus 163 ~~~~~~~~~----------------------------------------------------------------------- 171 (297)
T cd06659 163 FCAQISKDV----------------------------------------------------------------------- 171 (297)
T ss_pred hHhhccccc-----------------------------------------------------------------------
Confidence 876533100
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCC---c
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFD---S 531 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~---~ 531 (1092)
.......|+..|+|||.+.+..++.++|||||||++|||+++.. .
T Consensus 172 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 219 (297)
T cd06659 172 --------------------------------PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFS 219 (297)
T ss_pred --------------------------------ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 00013467889999999998889999999999999999998732 2
Q ss_pred HHHHHHHHHhccccC--CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 532 ERALAAAMSDLRDRI--LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 532 ~~~~~~~~~~~~~~~--~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
..... .+..+.... ........++.+.+|+.+||+.+|.+||++.++++||||.....
T Consensus 220 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 220 DSPVQ-AMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred CCHHH-HHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 22222 222222211 11223345678899999999999999999999999999986543
No 259
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.94 E-value=3.2e-27 Score=265.72 Aligned_cols=253 Identities=16% Similarity=0.168 Sum_probs=175.3
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCccccccccccccccc-cccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFV-TTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
+.+|.+.+.++ +.|+||+|.... .+..++.|... ............++..++...+|||++.+.........
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~- 78 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKK----TGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNL- 78 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECC----CCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCC-
Confidence 34566665554 679999998742 23334443322 11111112233456667778899999987665443310
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~ 367 (1092)
..++ ++|||+.+ +|.+++......++..+++.++.||+.||+|||++||+|+||||+||+++.++.
T Consensus 79 ------~~~~-------lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~ 144 (293)
T cd07843 79 ------DKIY-------MVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGI 144 (293)
T ss_pred ------CcEE-------EEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCc
Confidence 1112 37999985 999999776666888899999999999999999999999999999999999999
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+|++|||+++......
T Consensus 145 ~~l~d~g~~~~~~~~~---------------------------------------------------------------- 160 (293)
T cd07843 145 LKICDFGLAREYGSPL---------------------------------------------------------------- 160 (293)
T ss_pred EEEeecCceeeccCCc----------------------------------------------------------------
Confidence 9999999887644100
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHc
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell 526 (1092)
.......+++.|+|||.+.+. .++.++|||||||++|||+
T Consensus 161 ---------------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~ 201 (293)
T cd07843 161 ---------------------------------------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELL 201 (293)
T ss_pred ---------------------------------------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHH
Confidence 000123467889999998764 4689999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccc----------------------------cCCCCCCCC--CChhHHHHHHhccccCCCCC
Q 001366 527 GR---FDSERALAAAMSDLRD----------------------------RILPPSFLS--ENPKEAGFCLWQLHPEPLSR 573 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~----------------------------~~~p~~~~~--~~~~~~~li~~lL~~dP~~R 573 (1092)
++ |............... ..+...+.. .++.+.+|+..||+.+|++|
T Consensus 202 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 281 (293)
T cd07843 202 TKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKR 281 (293)
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCcccc
Confidence 86 3222211111110000 001112333 36778899999999999999
Q ss_pred CCHHHHhhhhhh
Q 001366 574 PTTREILQSEVT 585 (1092)
Q Consensus 574 psa~eiL~~~~~ 585 (1092)
||+.|+|+||||
T Consensus 282 ~t~~ell~~~~f 293 (293)
T cd07843 282 ISAEDALKHPYF 293 (293)
T ss_pred CCHHHHhcCCCC
Confidence 999999999997
No 260
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.94 E-value=8e-26 Score=248.80 Aligned_cols=261 Identities=22% Similarity=0.344 Sum_probs=217.0
Q ss_pred cCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCCCCCc---ccccceeeecCCCCeEEEEEecCCCCEEEEEECCC
Q 001366 776 NNSANVICSISFDRDE-DHFAAAGVSKKIKIFEFNALFNDSV---DVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG 851 (1092)
Q Consensus 776 ~~h~~~V~sl~fspdg-~~latgg~D~~I~Iwd~~~~~~~~~---~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dg 851 (1092)
..|.+.|+.+..-|.. .++|+++..+.|.|||......... .........+|...-.+++|++.....|++++.|+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence 3689999999999865 5778888999999999875322111 22333467788887889999998888999999999
Q ss_pred cEEEEECCCCc-------eEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCC--CceeeeEe-cCCceEEEEE
Q 001366 852 VVKLWDACTGQ-------TVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE--KNSLATIK-NIANVCCVQF 921 (1092)
Q Consensus 852 tV~IWD~~tg~-------~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~--~~~l~~l~-~~~~V~sl~f 921 (1092)
+|++||+.... ....+.+|+..|..|+|++.+..+|+++++|+.+.|||+|+ .++..... |.+.|+|++|
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~f 280 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAF 280 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEe
Confidence 99999987532 45678899999999999999999999999999999999995 44444444 6889999999
Q ss_pred ccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC--CCEEEEEECCCeEEEEEcCCCCCCCC------
Q 001366 922 SAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD--SGTLVTASTDNKLKLWDLKRTSHTGP------ 993 (1092)
Q Consensus 922 sp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~--~~~L~Sgs~Dg~I~vWDl~~~~~~~~------ 993 (1092)
+|.+..+||+|+.|++|.+||+|+.+.++.++.+|...|.+|.|+| ...|+|++.|+.+.|||+.+-.....
T Consensus 281 np~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~d 360 (422)
T KOG0264|consen 281 NPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAED 360 (422)
T ss_pred CCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhcc
Confidence 9999999999999999999999999999999999999999999994 45799999999999999986432211
Q ss_pred CCCceeEEEcCCCCCeEEEEEecCCCE-EEEEecCCcEEEEeCC
Q 001366 994 STNACSLTFSGHTNEKNFVGLSTADGY-IACGSESNEVYAYHRS 1036 (1092)
Q Consensus 994 ~~~~~~~~l~~h~~~V~~v~~spdg~~-lasgs~Dg~I~Iwd~~ 1036 (1092)
.....+..-.||+..|+.++|+|+..+ |++.++|+.+.||...
T Consensus 361 gppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 361 GPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred CCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 123455677799999999999999875 6788899999999754
No 261
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.94 E-value=1.5e-27 Score=273.58 Aligned_cols=259 Identities=19% Similarity=0.192 Sum_probs=198.9
Q ss_pred cccCCchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhh-HhhhhhhhhhccCCCCCCCcccccee
Q 001366 206 LSKSGFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDA-ALKAAGAMMVASNASPKPVGVGTAVV 282 (1092)
Q Consensus 206 ~~~~~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (1092)
-.+..+..|.+.++++ -.|+|-.+.-. ..+..++.|+.--+...... .--.++...+...+||||++++..-.
T Consensus 50 ~~~~~vg~y~i~~tig~g~f~~V~La~~~----~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~ 125 (596)
T KOG0586|consen 50 DDSNSVGLYVIIKTIGKGNFAKVKLARHI----LTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE 125 (596)
T ss_pred cccccccceeeeeeeccceeEEEEeeEec----CCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee
Confidence 3444555666666654 25777777663 34566777665333332222 12467778888999999999877766
Q ss_pred cCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE
Q 001366 283 SNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL 362 (1092)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill 362 (1092)
....+++ +|||+.||.|+++|.+.++..+ .++..+|.|+++||+|||+++|+|||||.+||||
T Consensus 126 t~~~lyl----------------V~eya~~ge~~~yl~~~gr~~e-~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL 188 (596)
T KOG0586|consen 126 TEATLYL----------------VMEYASGGELFDYLVKHGRMKE-KEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL 188 (596)
T ss_pred ecceeEE----------------EEEeccCchhHHHHHhcccchh-hhhhhhhHHHHHHHHHHhhcceeccccchhhccc
Confidence 6666663 8999999999999999988666 6999999999999999999999999999999999
Q ss_pred ccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccC
Q 001366 363 LQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETAN 442 (1092)
Q Consensus 363 ~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1092)
+.+.++||+|||++..+...
T Consensus 189 ~~~mnikIaDfgfS~~~~~~------------------------------------------------------------ 208 (596)
T KOG0586|consen 189 DENMNIKIADFGFSTFFDYG------------------------------------------------------------ 208 (596)
T ss_pred ccccceeeeccccceeeccc------------------------------------------------------------
Confidence 99999999999998775511
Q ss_pred ccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC-CccccchhhhHH
Q 001366 443 ESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIYSLGVL 521 (1092)
Q Consensus 443 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-t~~sDIwSLGvl 521 (1092)
..+.+.+|++.|+|||++.|..| ++.+|+||||++
T Consensus 209 --------------------------------------------~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvv 244 (596)
T KOG0586|consen 209 --------------------------------------------LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVV 244 (596)
T ss_pred --------------------------------------------ccccccCCCCCccChHhhcCcccCCcceehhhhhhh
Confidence 11227799999999999999777 789999999999
Q ss_pred HHHHcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhcc
Q 001366 522 FFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1092)
Q Consensus 522 l~ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~~ 591 (1092)
||-|+++ |++..-...--..++....-|.+ .+-++.++|.++|.++|.+|++..+|+.|.|++...+.
T Consensus 245 ly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~--ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 245 LYALVEGSLPFDGQNLKELRPRVLRGKYRIPFY--MSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred heeeeecccccCCcccccccchheeeeecccce--eechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 9999986 76654333222333333323333 36778899999999999999999999999999987655
No 262
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.94 E-value=3.9e-27 Score=259.74 Aligned_cols=241 Identities=16% Similarity=0.161 Sum_probs=174.2
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.++.|.||++.... .+..++.|++...... ......++..++...+|||++..+.....+...+
T Consensus 13 ~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~----------- 76 (262)
T cd06613 13 SGTYGDVYKARDIA----TGELVAIKVIKLEPGD-DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLW----------- 76 (262)
T ss_pred CCCceEEEEeEecC----CCCEEEEEEEEcCchh-hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEE-----------
Confidence 44778999987632 2344555554322222 2334445566788889999998766544333222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
++|||+.|++|.+++......++..++..++.|++.||.|||++||+|+||||+||+++.++.+|++|||++...
T Consensus 77 -----l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~ 151 (262)
T cd06613 77 -----IVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQL 151 (262)
T ss_pred -----EEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhh
Confidence 379999999999999876556888899999999999999999999999999999999999999999999987653
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
....
T Consensus 152 ~~~~---------------------------------------------------------------------------- 155 (262)
T cd06613 152 TATI---------------------------------------------------------------------------- 155 (262)
T ss_pred hhhh----------------------------------------------------------------------------
Confidence 3100
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC---CCCccccchhhhHHHHHHcCCCCc---HH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG---VCTTSSNIYSLGVLFFELFGRFDS---ER 533 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~---~~t~~sDIwSLGvll~ell~~f~~---~~ 533 (1092)
.......++..|+|||.+.+. .++.++|||||||++|||+++..+ ..
T Consensus 156 ---------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~ 208 (262)
T cd06613 156 ---------------------------AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH 208 (262)
T ss_pred ---------------------------hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 000134678889999999876 789999999999999999986322 22
Q ss_pred HHHHHHHhccccCCCCC---CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001366 534 ALAAAMSDLRDRILPPS---FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~---~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~ 584 (1092)
..............++. ....++.+.+|+.+||.++|..||++.+|+.|+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 209 PMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred HHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 12222111111111111 1223567889999999999999999999999997
No 263
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.94 E-value=1.4e-25 Score=246.23 Aligned_cols=287 Identities=18% Similarity=0.235 Sum_probs=229.6
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCC--Cccc------cc-cee-e-ecCCCCeEEEEEecCCCCE
Q 001366 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFND--SVDV------YY-PAV-E-MSNRSKLSCVCWNNYIKNY 843 (1092)
Q Consensus 775 l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~--~~~~------~~-~~~-~-~~h~~~V~~v~~sp~~~~~ 843 (1092)
+..|.-+|+|++++|++++..+++.|++|.=|++.+.... .... +. +.. . ..|...|.+++.+++ +.+
T Consensus 138 ~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~D-gky 216 (479)
T KOG0299|consen 138 IGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSD-GKY 216 (479)
T ss_pred eccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCC-CcE
Confidence 3478889999999999999999999999999998753321 0000 11 111 1 368889999999998 999
Q ss_pred EEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEc
Q 001366 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFS 922 (1092)
Q Consensus 844 LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fs 922 (1092)
||+|+.|..|.|||..+.+.+..+++|.+.|.+++|-. ....++++|.|++|++|++.....+.++. |+..|..|.-.
T Consensus 217 latgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~-gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL 295 (479)
T KOG0299|consen 217 LATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRK-GTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDAL 295 (479)
T ss_pred EEecCCCceEEEecCcccchhhcccccccceeeeeeec-CccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechh
Confidence 99999999999999999999999999999999999998 77889999999999999999888887765 78889999887
Q ss_pred cCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCC-ceeEE
Q 001366 923 AHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTN-ACSLT 1001 (1092)
Q Consensus 923 p~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~-~~~~~ 1001 (1092)
.-.. .+.+|+.|+++++|++... ...++.+|.+.+-|++|.+..+++|||.+|.|.+|++.+.++...... ..+..
T Consensus 296 ~reR-~vtVGgrDrT~rlwKi~ee--sqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~ 372 (479)
T KOG0299|consen 296 SRER-CVTVGGRDRTVRLWKIPEE--SQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIP 372 (479)
T ss_pred cccc-eEEeccccceeEEEecccc--ceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecccCceeEeeccccccC
Confidence 7663 6777889999999999543 345678999999999999999999999999999999986443221100 00000
Q ss_pred E---cCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCC----ceeeeeccccCCCCCccccCCCCCCEEEEEEeCCC
Q 001366 1002 F---SGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPM----PITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRS 1074 (1092)
Q Consensus 1002 l---~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~----~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~ 1074 (1092)
. -.+..+|++++..|...++|+||.+|.|++|-+..+. ++..++ -.++|++++|+++|
T Consensus 373 ~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls---------------~~GfVNsl~f~~sg 437 (479)
T KOG0299|consen 373 ELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS---------------LVGFVNSLAFSNSG 437 (479)
T ss_pred CccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc---------------cccEEEEEEEccCC
Confidence 0 1122489999999999999999999999999988762 333322 25789999999999
Q ss_pred CEEEEEe
Q 001366 1075 DMVVAAN 1081 (1092)
Q Consensus 1075 ~~Lasgs 1081 (1092)
..+++|-
T Consensus 438 k~ivagi 444 (479)
T KOG0299|consen 438 KRIVAGI 444 (479)
T ss_pred CEEEEec
Confidence 9666653
No 264
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.94 E-value=4.8e-27 Score=264.02 Aligned_cols=241 Identities=16% Similarity=0.193 Sum_probs=166.6
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
++.|.||+|.... .+..++.|+..............++..++...+|+|++.+.+....+...+
T Consensus 16 g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~------------ 79 (291)
T cd07870 16 GSYATVYKGISRI----NGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLT------------ 79 (291)
T ss_pred cCCEEEEEEEEcC----CCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEE------------
Confidence 3679999987522 244555555432222222223345566777889999987666544332222
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
.+|||+. ++|.+++......+...+++.++.||+.||.|||++||+||||||+||+++.++.+|++|||+++...
T Consensus 80 ----lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 80 ----FVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKS 154 (291)
T ss_pred ----EEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence 3789995 67877776544456677889999999999999999999999999999999999999999999886532
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
...
T Consensus 155 ~~~----------------------------------------------------------------------------- 157 (291)
T cd07870 155 IPS----------------------------------------------------------------------------- 157 (291)
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 100
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHHHH
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALA 536 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~~~ 536 (1092)
.......++.+|+|||.+.+ ..++.++|||||||+||||+++ |.......
T Consensus 158 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~ 211 (291)
T cd07870 158 --------------------------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF 211 (291)
T ss_pred --------------------------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH
Confidence 00012346888999999876 4578999999999999999996 43322211
Q ss_pred HHHHhc-c--------------------ccCC----CCC------CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 537 AAMSDL-R--------------------DRIL----PPS------FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 537 ~~~~~~-~--------------------~~~~----p~~------~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
...... . .... ++. .....+.+.+|+.+||..||++|||+.|++.||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 212 EQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred HHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 111110 0 0000 000 11235678899999999999999999999999997
No 265
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.94 E-value=4e-27 Score=265.49 Aligned_cols=250 Identities=13% Similarity=0.153 Sum_probs=176.0
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCc----hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP----SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTG 294 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1092)
..++.|.||+|.... .+..++.|.+...... ........+...+...+|+|++.+.+....+...+
T Consensus 9 g~g~~~~vy~~~~~~----~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~------ 78 (298)
T cd07841 9 GEGTYAVVYKARDKE----TGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNIN------ 78 (298)
T ss_pred eeccccEEEEEEECC----CCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEE------
Confidence 345789999998632 1344555444322221 11122234556677788999998766654322222
Q ss_pred CCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccc
Q 001366 295 VPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1092)
Q Consensus 295 ~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg 374 (1092)
++|||+ +++|.++|......++..+++.++.||++||.|||++||+|+||||+||+++.++.+|++|||
T Consensus 79 ----------lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg 147 (298)
T cd07841 79 ----------LVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFG 147 (298)
T ss_pred ----------EEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccce
Confidence 389999 999999997765468888999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++......
T Consensus 148 ~~~~~~~~~----------------------------------------------------------------------- 156 (298)
T cd07841 148 LARSFGSPN----------------------------------------------------------------------- 156 (298)
T ss_pred eeeeccCCC-----------------------------------------------------------------------
Confidence 887644100
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCCCC---
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFD--- 530 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~f~--- 530 (1092)
.......++.+|+|||.+.+ ..++.++|||||||++|||+++.+
T Consensus 157 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~ 204 (298)
T cd07841 157 --------------------------------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLP 204 (298)
T ss_pred --------------------------------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCcccc
Confidence 00012345778999999865 467999999999999999998732
Q ss_pred cHHHHHHHHHhccc---------------------cCCC-----CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001366 531 SERALAAAMSDLRD---------------------RILP-----PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1092)
Q Consensus 531 ~~~~~~~~~~~~~~---------------------~~~p-----~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~ 584 (1092)
.............. ...+ ..+...+..+.+|+.+||.++|++|||+.|+|+|+|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~ 284 (298)
T cd07841 205 GDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPY 284 (298)
T ss_pred CCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcc
Confidence 22221111111100 0000 012334577889999999999999999999999999
Q ss_pred hhhhhccc
Q 001366 585 TNEFQEVC 592 (1092)
Q Consensus 585 ~~~~~~~~ 592 (1092)
|.+...+.
T Consensus 285 ~~~~~~~~ 292 (298)
T cd07841 285 FSNDPAPT 292 (298)
T ss_pred ccCCCCCC
Confidence 99875544
No 266
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.94 E-value=6.4e-27 Score=258.15 Aligned_cols=236 Identities=15% Similarity=0.123 Sum_probs=168.0
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+|.|+||+|...+ +..++.|....... ....-..+...+....|||++.+......+...+
T Consensus 15 G~~~~vy~~~~~~-----~~~~aik~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~------------ 75 (256)
T cd05113 15 GQFGVVKYGKWRG-----QYDVAIKMIKEGSM--SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIY------------ 75 (256)
T ss_pred cccceEEEEEecC-----CCcEEEEEcCCCcc--cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcE------------
Confidence 3679999997644 22234433222111 1223345566778889999998766543222222
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
.+|||+.|++|.+++......+++..++.++.||+.||.|||+.||+|+||||+||+++.++.+|++|||.++...
T Consensus 76 ----lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~ 151 (256)
T cd05113 76 ----IVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVL 151 (256)
T ss_pred ----EEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecC
Confidence 3899999999999997765567888999999999999999999999999999999999999999999999876543
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
.+..
T Consensus 152 ~~~~---------------------------------------------------------------------------- 155 (256)
T cd05113 152 DDEY---------------------------------------------------------------------------- 155 (256)
T ss_pred CCce----------------------------------------------------------------------------
Confidence 1000
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHHH
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALA 536 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~~ 536 (1092)
.......++..|+|||.+.+..++.++|||||||++|||++ + |.......
T Consensus 156 --------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~ 209 (256)
T cd05113 156 --------------------------TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE 209 (256)
T ss_pred --------------------------eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence 00001234567999999998889999999999999999997 4 32222211
Q ss_pred HHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 537 AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 537 ~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
....+.....++.....++.+.+++.+||+++|.+||++.+|+.+
T Consensus 210 -~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 210 -TVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred -HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 122222222222233347889999999999999999999999874
No 267
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.94 E-value=7.5e-27 Score=257.87 Aligned_cols=247 Identities=16% Similarity=0.136 Sum_probs=167.9
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|.||+|...+.-.. ...++.|.............-..+..++....|||++..+...... .+.+.
T Consensus 5 ~g~~g~v~~~~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--------~~~~~-- 73 (262)
T cd05058 5 KGHFGCVYHGTLIDSDGQ-KIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS--------EGSPL-- 73 (262)
T ss_pred ccCCceEEEEEEecCCCc-eEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC--------CCCcE--
Confidence 457899999875321111 2233444332211112223334555677888999999766532211 11112
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+|+|+.+++|.+++.......+...++.++.||+.||+|||++||+||||||+|||++.++.+|++|||+++.+
T Consensus 74 -----lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 74 -----VVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDI 148 (262)
T ss_pred -----EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccc
Confidence 379999999999999776556677788899999999999999999999999999999999999999999988754
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
.+....
T Consensus 149 ~~~~~~-------------------------------------------------------------------------- 154 (262)
T cd05058 149 YDKEYY-------------------------------------------------------------------------- 154 (262)
T ss_pred cCCcce--------------------------------------------------------------------------
Confidence 310000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC----CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR----FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~----f~~~~~~ 535 (1092)
.........++..|+|||.+.+..++.++|||||||++|||+++ |......
T Consensus 155 -------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~ 209 (262)
T cd05058 155 -------------------------SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF 209 (262)
T ss_pred -------------------------eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 00000122345679999999888899999999999999999983 2222222
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
. ....+.....++.....++.+.+++..||+++|++||++.+|+..
T Consensus 210 ~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 210 D-ITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred H-HHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 2 222222222222222346778899999999999999999999874
No 268
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.94 E-value=2.3e-27 Score=266.44 Aligned_cols=242 Identities=16% Similarity=0.215 Sum_probs=168.8
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.++.|.||+|.... .+..++.|...............++..++...+|||++.+.+....+...+
T Consensus 15 ~g~~~~vy~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~----------- 79 (291)
T cd07844 15 EGSYATVYKGRSKL----TGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLT----------- 79 (291)
T ss_pred ecCCeEEEEEEEcC----CCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEE-----------
Confidence 34689999998632 234445544322211111122345677788889999998776654333222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+|||+.+ +|.+++......++...++.++.||+.||.|||++||+||||||+||+++.++.+|++|||+++..
T Consensus 80 -----lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 153 (291)
T cd07844 80 -----LVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAK 153 (291)
T ss_pred -----EEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECcccccccc
Confidence 27999986 999999776667788899999999999999999999999999999999999999999999987642
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
..+.
T Consensus 154 ~~~~---------------------------------------------------------------------------- 157 (291)
T cd07844 154 SVPS---------------------------------------------------------------------------- 157 (291)
T ss_pred CCCC----------------------------------------------------------------------------
Confidence 2000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
.......++..|+|||.+.+ ..++.++|||||||++|||+++ |......
T Consensus 158 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~ 210 (291)
T cd07844 158 ---------------------------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV 210 (291)
T ss_pred ---------------------------ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH
Confidence 00002235677999999876 5589999999999999999986 4322211
Q ss_pred -HH---HHHhccc---c-----------------CC-C----CCCCCCC--hhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001366 536 -AA---AMSDLRD---R-----------------IL-P----PSFLSEN--PKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1092)
Q Consensus 536 -~~---~~~~~~~---~-----------------~~-p----~~~~~~~--~~~~~li~~lL~~dP~~Rpsa~eiL~~~~ 584 (1092)
.. ....+.. . .. + ..+.... +.+.+|+.+||+++|.+|||+.++|+|||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~ 290 (291)
T cd07844 211 EDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPY 290 (291)
T ss_pred HHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCC
Confidence 11 1110000 0 00 0 0111223 77789999999999999999999999999
Q ss_pred h
Q 001366 585 T 585 (1092)
Q Consensus 585 ~ 585 (1092)
|
T Consensus 291 f 291 (291)
T cd07844 291 F 291 (291)
T ss_pred C
Confidence 7
No 269
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.94 E-value=1.2e-26 Score=247.45 Aligned_cols=280 Identities=14% Similarity=0.234 Sum_probs=229.5
Q ss_pred eecCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCc
Q 001366 774 EFNNSANVICSISFDRDE-DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV 852 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg-~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dgt 852 (1092)
.|.+|.+.|.|++=+|.. ..+|+|+.||.|+|||+.. -.+......|.+.|..|++.. ..+++++.|++
T Consensus 61 ~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsq-------R~~~~~f~AH~G~V~Gi~v~~---~~~~tvgdDKt 130 (433)
T KOG0268|consen 61 SLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQ-------RECIRTFKAHEGLVRGICVTQ---TSFFTVGDDKT 130 (433)
T ss_pred hccccccccchhhcCcchhhhhhccccCceEEEEehhh-------hhhhheeecccCceeeEEecc---cceEEecCCcc
Confidence 356999999999999987 7899999999999999975 223345567899999999976 57889999999
Q ss_pred EEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEec-CCceEEEEEccCCCeEEEE
Q 001366 853 VKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKN-IANVCCVQFSAHSSHLLAF 931 (1092)
Q Consensus 853 V~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~-~~~V~sl~fsp~~~~~lat 931 (1092)
|+.|.+.- ..+.++.+ ...+..++-+. ....++|||.+ |.|||.+...++.++.- ...|.++.|+|....+|++
T Consensus 131 vK~wk~~~-~p~~tilg-~s~~~gIdh~~-~~~~FaTcGe~--i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas 205 (433)
T KOG0268|consen 131 VKQWKIDG-PPLHTILG-KSVYLGIDHHR-KNSVFATCGEQ--IDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILAS 205 (433)
T ss_pred eeeeeccC-Ccceeeec-ccccccccccc-ccccccccCce--eeecccccCCccceeecCCCceeEEecCCCcchheee
Confidence 99999754 56666653 44577887776 66789999864 89999999999999984 5679999999998889999
Q ss_pred EECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCC-EEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeE
Q 001366 932 GSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSG-TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKN 1010 (1092)
Q Consensus 932 gs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~-~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~ 1010 (1092)
+..|+.|.+||+|...+...+.. ...-..|+|+|.. .+++|+.|..+..||++.. ..++..+.+|.+.|.
T Consensus 206 ~~sDrsIvLyD~R~~~Pl~KVi~--~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l-------~~p~~v~~dhvsAV~ 276 (433)
T KOG0268|consen 206 CASDRSIVLYDLRQASPLKKVIL--TMRTNTICWNPEAFNFVAANEDHNLYTYDMRNL-------SRPLNVHKDHVSAVM 276 (433)
T ss_pred eccCCceEEEecccCCccceeee--eccccceecCccccceeeccccccceehhhhhh-------cccchhhcccceeEE
Confidence 99999999999998875444332 2334678999644 4789999999999999953 356778889999999
Q ss_pred EEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1011 FVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1011 ~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
+|+|||.|+-+++||.|.+|+||....+..--.+. +..-+.|.+|.|+.|++++++||.|+.|++|.
T Consensus 277 dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYh-------------tkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWk 343 (433)
T KOG0268|consen 277 DVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYH-------------TKRMQHVFCVKYSMDSKYIISGSDDGNVRLWK 343 (433)
T ss_pred EeccCCCcchhccccccceEEEeecCCCcchhhhh-------------HhhhheeeEEEEeccccEEEecCCCcceeeee
Confidence 99999999999999999999999876543221111 22246799999999999999999999999996
No 270
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.94 E-value=5.1e-27 Score=264.04 Aligned_cols=251 Identities=16% Similarity=0.094 Sum_probs=172.3
Q ss_pred hHHHhhhc--cccceeeeCCCCCcc-ccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAF-KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
+|.++..+ +|.|.||++...+.- ...+..++.+...... ........++...+....|||++.+...........
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~- 83 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI- 83 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE-
Confidence 34444333 368999998742210 0112233333332211 111222344556778889999998766544322222
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccC
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLD 354 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrD 354 (1092)
.+|||+.|++|.++|...+ ..++...++.++.||+.||.|||++||+|||
T Consensus 84 ---------------lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~d 148 (291)
T cd05094 84 ---------------MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRD 148 (291)
T ss_pred ---------------EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 3899999999999997543 2367778999999999999999999999999
Q ss_pred CCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCcc
Q 001366 355 LKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKY 434 (1092)
Q Consensus 355 LKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (1092)
|||+||+++.++.+|++|||+++........
T Consensus 149 lkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~------------------------------------------------- 179 (291)
T cd05094 149 LATRNCLVGANLLVKIGDFGMSRDVYSTDYY------------------------------------------------- 179 (291)
T ss_pred cCcceEEEccCCcEEECCCCcccccCCCcee-------------------------------------------------
Confidence 9999999999999999999988764311000
Q ss_pred CCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCcccc
Q 001366 435 GNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSN 514 (1092)
Q Consensus 435 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sD 514 (1092)
..-....++..|+|||.+.+..++.++|
T Consensus 180 ----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~D 207 (291)
T cd05094 180 ----------------------------------------------------RVGGHTMLPIRWMPPESIMYRKFTTESD 207 (291)
T ss_pred ----------------------------------------------------ecCCCCCcceeecChHHhccCCCCchhh
Confidence 0001234567799999999989999999
Q ss_pred chhhhHHHHHHcC-CCCc---HHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 515 IYSLGVLFFELFG-RFDS---ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 515 IwSLGvll~ell~-~f~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
||||||++|||++ +..+ .... ..+..+.....+......+..+.+|+.+||+++|.+||++.++++.
T Consensus 208 i~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~ 278 (291)
T cd05094 208 VWSFGVILWEIFTYGKQPWFQLSNT-EVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKI 278 (291)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 9999999999997 5222 2221 2222233333333333456789999999999999999999999763
No 271
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.94 E-value=5.3e-27 Score=258.42 Aligned_cols=244 Identities=18% Similarity=0.132 Sum_probs=171.0
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
+|.+.+.+ +|.|+||++...+ +..++.|...... .....-..+..++....|||++..+.....+...+
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~-----~~~~a~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~-- 75 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRA-----QIKVAIKAINEGA--MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLY-- 75 (256)
T ss_pred HcEEeeEecCCcCceEEEEEecc-----CceEEEEecccCC--ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEE--
Confidence 44444434 4789999997744 2234444332111 11222334566788889999998665543322222
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
++|+|++|++|.+++......++...++.++.||+.||+|||++||+||||||+||+++.++.+|+
T Consensus 76 --------------iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl 141 (256)
T cd05114 76 --------------IVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKV 141 (256)
T ss_pred --------------EEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEE
Confidence 389999999999999765446788889999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++.......
T Consensus 142 ~d~g~~~~~~~~~~------------------------------------------------------------------ 155 (256)
T cd05114 142 SDFGMTRYVLDDEY------------------------------------------------------------------ 155 (256)
T ss_pred CCCCCccccCCCce------------------------------------------------------------------
Confidence 99998865431000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~- 528 (1092)
.......++..|+|||.+.+..++.++|||||||++|||++ +
T Consensus 156 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~ 199 (256)
T cd05114 156 ------------------------------------TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGK 199 (256)
T ss_pred ------------------------------------eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCC
Confidence 00001223456999999998889999999999999999998 4
Q ss_pred --CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|.......... .+.....+......++.+.+|+.+||..+|.+||++.++++.
T Consensus 200 ~p~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~ 254 (256)
T cd05114 200 MPFEKKSNYEVVE-MISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRA 254 (256)
T ss_pred CCCCCCCHHHHHH-HHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 43332222222 222222222222346778999999999999999999999863
No 272
>PTZ00420 coronin; Provisional
Probab=99.94 E-value=1e-24 Score=260.55 Aligned_cols=250 Identities=15% Similarity=0.148 Sum_probs=190.6
Q ss_pred EeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCc--------eEEEee
Q 001366 797 AGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ--------TVSHYI 868 (1092)
Q Consensus 797 gg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~--------~i~~l~ 868 (1092)
||.++.|++|+.... .......+|...|.+++|+|+.+.+||||+.||+|+|||+.++. .+..+.
T Consensus 50 GG~~gvI~L~~~~r~-------~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~ 122 (568)
T PTZ00420 50 GGLIGAIRLENQMRK-------PPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILK 122 (568)
T ss_pred CCceeEEEeeecCCC-------ceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEee
Confidence 677889999997541 12234567999999999999767899999999999999997642 345678
Q ss_pred ccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCc
Q 001366 869 EHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA 948 (1092)
Q Consensus 869 ~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~ 948 (1092)
+|...|.+++|+|....+|++|+.|++|+|||++++..+..+.+...|.+++|+|+|. +|++++.|+.|++||++++..
T Consensus 123 gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~-lLat~s~D~~IrIwD~Rsg~~ 201 (568)
T PTZ00420 123 GHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGN-LLSGTCVGKHMHIIDPRKQEI 201 (568)
T ss_pred cCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCC-EEEEEecCCEEEEEECCCCcE
Confidence 9999999999999444467899999999999999999888888788899999999996 889999999999999998764
Q ss_pred ceEEecCCCCCeEEEE-----Ec-CCCEEEEEECCC----eEEEEEcCCCCCCCCCCCceeEEE--cCCCCCeEEEEEec
Q 001366 949 PWCVLAGHEKAVSYVK-----FL-DSGTLVTASTDN----KLKLWDLKRTSHTGPSTNACSLTF--SGHTNEKNFVGLST 1016 (1092)
Q Consensus 949 ~~~~l~~H~~~V~~v~-----fs-~~~~L~Sgs~Dg----~I~vWDl~~~~~~~~~~~~~~~~l--~~h~~~V~~v~~sp 1016 (1092)
+..+.+|.+.+.+.. |+ ++++|+|++.|+ +|+|||+++. ..++..+ ..+...+......+
T Consensus 202 -i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~-------~~pl~~~~ld~~~~~L~p~~D~~ 273 (568)
T PTZ00420 202 -ASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNT-------TSALVTMSIDNASAPLIPHYDES 273 (568)
T ss_pred -EEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCC-------CCceEEEEecCCccceEEeeeCC
Confidence 567889987654332 33 567888888774 7999999853 2334333 33334333343455
Q ss_pred CCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCC
Q 001366 1017 ADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSD 1075 (1092)
Q Consensus 1017 dg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~ 1075 (1092)
+|.++++|+.|+.|++|++..+....... -.+..++.+++|.|+..
T Consensus 274 tg~l~lsGkGD~tIr~~e~~~~~~~~l~~-------------~~s~~p~~g~~f~Pkr~ 319 (568)
T PTZ00420 274 TGLIYLIGKGDGNCRYYQHSLGSIRKVNE-------------YKSCSPFRSFGFLPKQI 319 (568)
T ss_pred CCCEEEEEECCCeEEEEEccCCcEEeecc-------------cccCCCccceEEccccc
Confidence 68899999999999999987653211111 12456678888888643
No 273
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.94 E-value=1.1e-26 Score=247.58 Aligned_cols=286 Identities=19% Similarity=0.253 Sum_probs=234.5
Q ss_pred hhccchhhhhhccccccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEE
Q 001366 726 LRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKI 805 (1092)
Q Consensus 726 l~~~~~~~~~~~~~~~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~I 805 (1092)
|.+|.+-+..++... ..+....++++||.+++|++.+-++... +..|.+.|..|+++. ..++++|.|++|+.
T Consensus 62 L~gHrdGV~~lakhp-~~ls~~aSGs~DG~VkiWnlsqR~~~~~-----f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~ 133 (433)
T KOG0268|consen 62 LDGHRDGVSCLAKHP-NKLSTVASGSCDGEVKIWNLSQRECIRT-----FKAHEGLVRGICVTQ--TSFFTVGDDKTVKQ 133 (433)
T ss_pred ccccccccchhhcCc-chhhhhhccccCceEEEEehhhhhhhhe-----eecccCceeeEEecc--cceEEecCCcceee
Confidence 567776666554311 1123456889999999999887665543 558999999999987 67899999999999
Q ss_pred EEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCC
Q 001366 806 FEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPT 885 (1092)
Q Consensus 806 wd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~ 885 (1092)
|.+... +...+-.++.+..+.-+.. .+.++||+. .|.|||.....++..+......|.++.|+|....
T Consensus 134 wk~~~~---------p~~tilg~s~~~gIdh~~~-~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETs 201 (433)
T KOG0268|consen 134 WKIDGP---------PLHTILGKSVYLGIDHHRK-NSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETS 201 (433)
T ss_pred eeccCC---------cceeeeccccccccccccc-cccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcch
Confidence 998651 3344445677788876665 678899885 5999999988999999988899999999998889
Q ss_pred EEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEE
Q 001366 886 KLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKF 965 (1092)
Q Consensus 886 ~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~f 965 (1092)
+|++|..|++|.+||++++.++..+-....-+.|+|+|.. ..|++|+.|..++.||+|....++.+..+|.++|.+|.|
T Consensus 202 ILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPea-fnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdf 280 (433)
T KOG0268|consen 202 ILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNPEA-FNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDF 280 (433)
T ss_pred heeeeccCCceEEEecccCCccceeeeeccccceecCccc-cceeeccccccceehhhhhhcccchhhcccceeEEEecc
Confidence 9999999999999999999999988888888899999955 689999999999999999999999999999999999999
Q ss_pred c-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCC
Q 001366 966 L-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPM 1039 (1092)
Q Consensus 966 s-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~ 1039 (1092)
+ .|+.++|||.|.+|+||.++.+.. ....++ ..-..|.+|.||.|.+||+|||+|+.|++|...-.+
T Consensus 281 sptG~EfvsgsyDksIRIf~~~~~~S-----RdiYht--kRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Ase 348 (433)
T KOG0268|consen 281 SPTGQEFVSGSYDKSIRIFPVNHGHS-----RDIYHT--KRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASE 348 (433)
T ss_pred CCCcchhccccccceEEEeecCCCcc-----hhhhhH--hhhheeeEEEEeccccEEEecCCCcceeeeecchhh
Confidence 9 677899999999999999984321 111111 123468999999999999999999999999755433
No 274
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.94 E-value=6.2e-27 Score=257.98 Aligned_cols=243 Identities=18% Similarity=0.154 Sum_probs=175.7
Q ss_pred cccceeeeCCCCCccccccccccccccccccCch-hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
+|.|.||++.... .+..++.|+........ ....-..+...+...+|||++.+++....... ...
T Consensus 11 g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-------~~~--- 76 (265)
T cd08217 11 GSFGTVRKVRRKS----DGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSN-------QTL--- 76 (265)
T ss_pred CCCeEEEEeeecC----CCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCC-------CEE---
Confidence 4789999987532 23344444432222222 22233345567788899999976554321110 001
Q ss_pred ccCCCcccccCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhh-----hcCccccCCCCCCeEEccCCcEEEe
Q 001366 300 WIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQIVALVDYHH-----TQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~---~~~~~~~~~~~i~~qil~~l~~lH-----s~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
..+|||+.|++|.+++... ...++..+++.++.||+.||+|+| +.+|+|+||||+||+++.++.+|++
T Consensus 77 ----~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~ 152 (265)
T cd08217 77 ----YIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLG 152 (265)
T ss_pred ----EEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEe
Confidence 1379999999999999654 456788899999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++.+....
T Consensus 153 d~g~~~~~~~~~-------------------------------------------------------------------- 164 (265)
T cd08217 153 DFGLAKILGHDS-------------------------------------------------------------------- 164 (265)
T ss_pred cccccccccCCc--------------------------------------------------------------------
Confidence 999887643100
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR--- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~--- 528 (1092)
.......|++.|+|||.+.+..++.++|+|||||++|+|+++
T Consensus 165 -----------------------------------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p 209 (265)
T cd08217 165 -----------------------------------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPP 209 (265)
T ss_pred -----------------------------------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCc
Confidence 000134578889999999998899999999999999999986
Q ss_pred CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 529 FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 529 f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
|.... .......+.....++.....++.+.+++.+||..+|.+||++.+||+|||+
T Consensus 210 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 210 FTARN-QLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ccCcC-HHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 33322 222233333333333334557889999999999999999999999999985
No 275
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.94 E-value=6.5e-27 Score=258.50 Aligned_cols=244 Identities=17% Similarity=0.143 Sum_probs=177.1
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.++.|.||++.... .+..++.|+...... ......-..+.+++....|||++.+.+....+...+
T Consensus 3 ~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~--------- 69 (262)
T cd05572 3 VGGFGRVELVKVKS----KNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIY--------- 69 (262)
T ss_pred CCCceEEEEEEECC----CCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccE---------
Confidence 35789999998742 234455554422111 112233445566778889999998766544333222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
.+|||++|++|.++|.... .++...++.++.||+.||.|||++|++|+||||+||+++.++.++++|||+++
T Consensus 70 -------lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~ 141 (262)
T cd05572 70 -------MLMEYCLGGELWTILRDRG-LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAK 141 (262)
T ss_pred -------EEEecCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCccc
Confidence 3799999999999997654 46777899999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
......
T Consensus 142 ~~~~~~-------------------------------------------------------------------------- 147 (262)
T cd05572 142 KLKSGQ-------------------------------------------------------------------------- 147 (262)
T ss_pred ccCccc--------------------------------------------------------------------------
Confidence 643100
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH-
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER- 533 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~- 533 (1092)
......|++.|+|||.+.+..++.++|+|||||++|||+++ |....
T Consensus 148 ------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 197 (262)
T cd05572 148 ------------------------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE 197 (262)
T ss_pred ------------------------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC
Confidence 00023577889999999888899999999999999999986 33222
Q ss_pred -HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhh
Q 001366 534 -ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEF 588 (1092)
Q Consensus 534 -~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-----a~eiL~~~~~~~~ 588 (1092)
..............++.....++.+.+|+.+||+++|.+||+ +.|+++||||.+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 198 DPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred CHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 222222222111122222233788999999999999999999 9999999999763
No 276
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.94 E-value=9.8e-27 Score=258.40 Aligned_cols=250 Identities=13% Similarity=0.023 Sum_probs=169.6
Q ss_pred hccccceeeeCCCCCccccccccccccccccc-cCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTT-TMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..+|.|+||+|...+.-. ...++.|..... ........-.++...+...+|||++.++.......... ....+.
T Consensus 8 g~G~~g~V~~~~~~~~~~--~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~---~~~~~~ 82 (272)
T cd05075 8 GEGEFGSVMEGQLNQDDS--ILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESE---GYPSPV 82 (272)
T ss_pred CcccCceEEEeEEccCCC--eeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCccc---CCCCcE
Confidence 345789999998743111 112333333211 11222233344556677889999998665432111100 011112
Q ss_pred ccccCCCcccccCCCCCHHHHHhhc-----CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEec
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNAR-----GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIG 372 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~-----~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~D 372 (1092)
.+|+|+.+++|.+++... ...++...++.++.||+.||+|||++||+||||||+|||++.++.+|++|
T Consensus 83 -------~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~D 155 (272)
T cd05075 83 -------VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVAD 155 (272)
T ss_pred -------EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECC
Confidence 379999999999998432 23467778999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCC
Q 001366 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1092)
Q Consensus 373 fg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 452 (1092)
||+++.+......
T Consensus 156 fg~~~~~~~~~~~------------------------------------------------------------------- 168 (272)
T cd05075 156 FGLSKKIYNGDYY------------------------------------------------------------------- 168 (272)
T ss_pred CCcccccCcccce-------------------------------------------------------------------
Confidence 9998764310000
Q ss_pred CCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---
Q 001366 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R--- 528 (1092)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~--- 528 (1092)
..-....+++.|+|||.+.+..++.++|||||||++|||++ +
T Consensus 169 ----------------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p 214 (272)
T cd05075 169 ----------------------------------RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTP 214 (272)
T ss_pred ----------------------------------ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCC
Confidence 00001234566999999999889999999999999999997 3
Q ss_pred CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|..... ......+.....++........+.+++.+||+++|.+|||+.+|++.
T Consensus 215 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 215 YPGVEN-SEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred CCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 433322 22333333333333334556788999999999999999999999874
No 277
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.94 E-value=3.9e-27 Score=261.82 Aligned_cols=233 Identities=17% Similarity=0.108 Sum_probs=168.0
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..++.|.||++... ..+...+.++....... ....... .+ ..+|||++.++.....+...+
T Consensus 25 g~g~~g~v~~~~~~----~~~~~~~~k~~~~~~~~-~~e~~~~--~~--~~~h~~iv~~~~~~~~~~~~~---------- 85 (267)
T PHA03390 25 IDGKFGKVSVLKHK----PTQKLFVQKIIKAKNFN-AIEPMVH--QL--MKDNPNFIKLYYSVTTLKGHV---------- 85 (267)
T ss_pred cCCCceEEEEEEEc----CCCcEEEEEEEehhhcc-hhhHHHH--HH--hhcCCCEEEEEEEEecCCeeE----------
Confidence 34468999988752 22444445444221111 1111111 11 236899998776655444333
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC-cEEEecccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN-QVKYIGPIIQK 377 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~-~vkl~Dfg~~~ 377 (1092)
.+|||++|++|.++++..+ .++..+++.++.||+.||.|||++||+||||||+||+++.++ .++++|||+++
T Consensus 86 ------iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~ 158 (267)
T PHA03390 86 ------LIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCK 158 (267)
T ss_pred ------EEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccce
Confidence 3899999999999998765 678889999999999999999999999999999999999998 99999999876
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.....
T Consensus 159 ~~~~~--------------------------------------------------------------------------- 163 (267)
T PHA03390 159 IIGTP--------------------------------------------------------------------------- 163 (267)
T ss_pred ecCCC---------------------------------------------------------------------------
Confidence 53200
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
....|+..|+|||.+.+..++.++|||||||++|||+++ |.....
T Consensus 164 --------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~ 211 (267)
T PHA03390 164 --------------------------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED 211 (267)
T ss_pred --------------------------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc
Confidence 012467789999999998899999999999999999986 322111
Q ss_pred ----HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC-HHHHhhhhhhh
Q 001366 535 ----LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-TREILQSEVTN 586 (1092)
Q Consensus 535 ----~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-a~eiL~~~~~~ 586 (1092)
........ ...++.....++.+.+||.+||+++|.+||+ +.+||+||||.
T Consensus 212 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 212 EELDLESLLKRQ--QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred chhhHHHHHHhh--cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence 11111111 1222333357899999999999999999996 59999999995
No 278
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.94 E-value=5.5e-27 Score=259.17 Aligned_cols=247 Identities=14% Similarity=0.146 Sum_probs=176.9
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|.||+|...+ .+..++.|+..............++...+...+|+|++.+......+...
T Consensus 11 ~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~------------ 74 (267)
T cd06610 11 VGATAVVYAAICLP----NNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDEL------------ 74 (267)
T ss_pred CCCCeEEEEEEEcC----CCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEE------------
Confidence 45789999998532 24455555553322233444455566677888999988765443322111
Q ss_pred ccCCCcccccCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARG--HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~--~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
..+|++++|++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||++++++.+|++|||++.
T Consensus 75 ----~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~ 150 (267)
T cd06610 75 ----WLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSA 150 (267)
T ss_pred ----EEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHH
Confidence 14899999999999997642 357888999999999999999999999999999999999999999999999887
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+......
T Consensus 151 ~~~~~~~~------------------------------------------------------------------------ 158 (267)
T cd06610 151 SLADGGDR------------------------------------------------------------------------ 158 (267)
T ss_pred HhccCccc------------------------------------------------------------------------
Confidence 65421000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
.........|+..|+|||.+... .++.++|+|||||++|||++| |....
T Consensus 159 ---------------------------~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~ 211 (267)
T cd06610 159 ---------------------------TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYP 211 (267)
T ss_pred ---------------------------cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccC
Confidence 00001134678899999998876 789999999999999999997 32222
Q ss_pred HHHHHHHhccccC--CCCC--CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 534 ALAAAMSDLRDRI--LPPS--FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 534 ~~~~~~~~~~~~~--~p~~--~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
........+.... ++.. ....++.+.+|+.+||+.+|.+||++.+|++||||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 212 PMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred hhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 2222222222211 1111 12446788999999999999999999999999997
No 279
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.94 E-value=6.4e-27 Score=264.10 Aligned_cols=247 Identities=14% Similarity=0.052 Sum_probs=166.8
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 289 (1092)
+|.+.+.+ +|.|+||+|...+.-.. ..++.+++..............+...+... .|||++.++.....+...+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~- 79 (297)
T cd05089 3 DIKFEDVIGEGNFGQVIRAMIKKDGLK--MNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY- 79 (297)
T ss_pred cceeeeeecCCCcceEEEEEecCCCCc--ceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce-
Confidence 34444333 47899999976331110 112222222111111222233344455555 7999998766544332222
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccC
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLD 354 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrD 354 (1092)
.+|+|+.+++|.++|.... ..++...++.++.||+.||+|||++||+|||
T Consensus 80 ---------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~d 144 (297)
T cd05089 80 ---------------IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRD 144 (297)
T ss_pred ---------------EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCc
Confidence 3799999999999996532 2467778999999999999999999999999
Q ss_pred CCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCcc
Q 001366 355 LKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKY 434 (1092)
Q Consensus 355 LKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (1092)
|||+|||++.++.+|++|||++.......
T Consensus 145 lkp~Nill~~~~~~kl~dfg~~~~~~~~~--------------------------------------------------- 173 (297)
T cd05089 145 LAARNVLVGENLASKIADFGLSRGEEVYV--------------------------------------------------- 173 (297)
T ss_pred CCcceEEECCCCeEEECCcCCCcccccee---------------------------------------------------
Confidence 99999999999999999999875321000
Q ss_pred CCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCcccc
Q 001366 435 GNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSN 514 (1092)
Q Consensus 435 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sD 514 (1092)
. ......+..|+|||.+.+..++.++|
T Consensus 174 ----------------------------------------------------~-~~~~~~~~~y~aPE~~~~~~~~~~~D 200 (297)
T cd05089 174 ----------------------------------------------------K-KTMGRLPVRWMAIESLNYSVYTTKSD 200 (297)
T ss_pred ----------------------------------------------------c-cCCCCcCccccCchhhccCCCCchhh
Confidence 0 00011234599999998888999999
Q ss_pred chhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 515 IYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 515 IwSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
||||||++|||++ + |........ ...+.....++.....++.+.+|+.+||..+|.+||++.++++.
T Consensus 201 vwSlG~il~el~t~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 201 VWSFGVLLWEIVSLGGTPYCGMTCAEL-YEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999996 4 433322222 22223333333334567889999999999999999999999875
No 280
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.94 E-value=7.8e-27 Score=257.39 Aligned_cols=243 Identities=12% Similarity=0.032 Sum_probs=171.2
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchh-hHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..+|.|.||+|.... ...+..++.|+......... ......+..++....|||++..+.....+..
T Consensus 4 g~G~~g~v~~~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----------- 70 (257)
T cd05116 4 GSGNFGTVKKGMYKM--KKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESW----------- 70 (257)
T ss_pred CCcCCcceEEeEEec--CCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCc-----------
Confidence 356789999985421 12234455555433322222 2223445566778899999986654321111
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
-.+|||+.+++|.+++.... .++...++.++.||+.||+|+|++||+||||||+||+++.++.+|++|||+++
T Consensus 71 ------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~ 143 (257)
T cd05116 71 ------MLVMELAELGPLNKFLQKNK-HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSK 143 (257)
T ss_pred ------EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCcccc
Confidence 13799999999999997654 57777999999999999999999999999999999999999999999999887
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+......
T Consensus 144 ~~~~~~~~------------------------------------------------------------------------ 151 (257)
T cd05116 144 ALGADENY------------------------------------------------------------------------ 151 (257)
T ss_pred ccCCCCCe------------------------------------------------------------------------
Confidence 64411000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSER 533 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~ 533 (1092)
........++..|+|||.+....++.++|||||||++|||++ + |....
T Consensus 152 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 203 (257)
T cd05116 152 ----------------------------YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK 203 (257)
T ss_pred ----------------------------eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 000001234567999999988889999999999999999996 4 33322
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
.. .....+.....++.....++++.+||.+||.++|.+||++.+|.+.
T Consensus 204 ~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~ 251 (257)
T cd05116 204 GN-EVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELR 251 (257)
T ss_pred HH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHH
Confidence 22 2223333333334444568899999999999999999999998763
No 281
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.94 E-value=6.2e-27 Score=274.80 Aligned_cols=246 Identities=14% Similarity=0.136 Sum_probs=169.7
Q ss_pred hccccceeeeCCCCCcc-ccccccccccccccccCchhhHhhhhhhhhhccCC-CCCCCccccceecCCCCCCCccCCCC
Q 001366 219 TLKGKGIVCRGPPLNAF-KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNA-SPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
..+|.|+||+|.....- ......++.|+............-.++...+.... |||++.++.........+
T Consensus 46 G~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~-------- 117 (400)
T cd05105 46 GSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIY-------- 117 (400)
T ss_pred cCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceE--------
Confidence 34578999998741100 00112355555432222222233444556666664 999998776654333333
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcC-----------------------------------------------------
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARG----------------------------------------------------- 323 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~----------------------------------------------------- 323 (1092)
.+||||+||+|.++|....
T Consensus 118 --------lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 118 --------IITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred --------EEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 3899999999999985421
Q ss_pred ------------------------------------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeE
Q 001366 324 ------------------------------------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFK 361 (1092)
Q Consensus 324 ------------------------------------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nil 361 (1092)
..++..+++.++.||+.||+|||++||+||||||+|||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nil 269 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEE
Confidence 13556678899999999999999999999999999999
Q ss_pred EccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 362 LLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 362 l~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
++.++.+|++|||+++.......
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~--------------------------------------------------------- 292 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSN--------------------------------------------------------- 292 (400)
T ss_pred EeCCCEEEEEeCCcceecccccc---------------------------------------------------------
Confidence 99999999999999876431000
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHH
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVL 521 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvl 521 (1092)
........++..|+|||.+.+..++.++|||||||+
T Consensus 293 --------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvi 328 (400)
T cd05105 293 --------------------------------------------YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGIL 328 (400)
T ss_pred --------------------------------------------ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHH
Confidence 000012346677999999999899999999999999
Q ss_pred HHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 522 FFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 522 l~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
||||++ + |+...........+.....++.....++.+.+++.+||..+|++||++.+|.+
T Consensus 329 l~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 329 LWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 999985 3 33322222223333333333333445678899999999999999999998876
No 282
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.94 E-value=6.7e-27 Score=257.30 Aligned_cols=211 Identities=19% Similarity=0.244 Sum_probs=165.0
Q ss_pred hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHH
Q 001366 255 DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLY 333 (1092)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~ 333 (1092)
......++...++..+|+|++.+++....+.... .+||||.|++|.+++... +..++..++..
T Consensus 42 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~----------------~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~ 105 (256)
T cd08221 42 ERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLL----------------IEMEYANGGTLYDKIVRQKGQLFEEEMVLW 105 (256)
T ss_pred HHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEE----------------EEEEecCCCcHHHHHHhccccCCCHHHHHH
Confidence 3344566777888889999998777655433222 379999999999999764 45678889999
Q ss_pred HHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchh
Q 001366 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAK 413 (1092)
Q Consensus 334 i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 413 (1092)
++.|++.+|.|||++||+|+||||+||+++.++.+|++|||+++......
T Consensus 106 ~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~------------------------------ 155 (256)
T cd08221 106 YLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY------------------------------ 155 (256)
T ss_pred HHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc------------------------------
Confidence 99999999999999999999999999999999999999999886543100
Q ss_pred hcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCccccccccccccccccc
Q 001366 414 KQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQL 493 (1092)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (1092)
.......
T Consensus 156 -------------------------------------------------------------------------~~~~~~~ 162 (256)
T cd08221 156 -------------------------------------------------------------------------SMAETVV 162 (256)
T ss_pred -------------------------------------------------------------------------ccccccC
Confidence 0001346
Q ss_pred ccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCC
Q 001366 494 EEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEP 570 (1092)
Q Consensus 494 gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP 570 (1092)
|++.|+|||.+.+..++.++|+|||||++|||+++ |...... .....+....+++.....+.++.+|+.+||+++|
T Consensus 163 ~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p 241 (256)
T cd08221 163 GTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-NLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDP 241 (256)
T ss_pred CCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCccccCHHHHHHHHHHcccCc
Confidence 78899999999988899999999999999999986 4333222 2222223333344445557889999999999999
Q ss_pred CCCCCHHHHhhhhhh
Q 001366 571 LSRPTTREILQSEVT 585 (1092)
Q Consensus 571 ~~Rpsa~eiL~~~~~ 585 (1092)
.+||++.++|+|+|+
T Consensus 242 ~~R~s~~~ll~~~~l 256 (256)
T cd08221 242 EKRPTADEVLDQPLL 256 (256)
T ss_pred ccCCCHHHHhhCcCC
Confidence 999999999999985
No 283
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.94 E-value=6.3e-27 Score=263.18 Aligned_cols=245 Identities=14% Similarity=0.144 Sum_probs=169.5
Q ss_pred ccccceeeeCCCCCcc-ccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAF-KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++...+.- ......++.|+..............++..++... +|||++.+......+...+
T Consensus 22 ~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~--------- 92 (293)
T cd05053 22 EGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLY--------- 92 (293)
T ss_pred ccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeE---------
Confidence 3578999998753211 0112334444443322222222334444555566 7999987655433222222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNAR---------------GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL 362 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~---------------~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill 362 (1092)
.+|||+.+++|.+++... ...++...++.++.||+.||+|||++||+||||||+||++
T Consensus 93 -------li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~ 165 (293)
T cd05053 93 -------VVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV 165 (293)
T ss_pred -------EEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE
Confidence 379999999999999643 3457788899999999999999999999999999999999
Q ss_pred ccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccC
Q 001366 363 LQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETAN 442 (1092)
Q Consensus 363 ~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1092)
+.++.+|++|||+++.+......
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------------------------------- 188 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYY--------------------------------------------------------- 188 (293)
T ss_pred cCCCeEEeCccccccccccccce---------------------------------------------------------
Confidence 99999999999988764411000
Q ss_pred ccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHH
Q 001366 443 ESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLF 522 (1092)
Q Consensus 443 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll 522 (1092)
.......++..|+|||.+.+..++.++|||||||++
T Consensus 189 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 224 (293)
T cd05053 189 --------------------------------------------RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLL 224 (293)
T ss_pred --------------------------------------------eccCCCCCCccccCHHHhccCCcCcccceeehhhHH
Confidence 000011234569999999888999999999999999
Q ss_pred HHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 523 FELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 523 ~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|||++ + |.... .......+.....++.....++.+.+|+.+||.++|.+|||+.+++++
T Consensus 225 ~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 225 WEIFTLGGSPYPGIP-VEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHhcCCCCCCCCCC-HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 99986 3 33322 222333333333344444567889999999999999999999999985
No 284
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.94 E-value=4.8e-27 Score=270.09 Aligned_cols=255 Identities=16% Similarity=0.203 Sum_probs=174.2
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+|.|+||+|... ..+..++.|.....+..........+..++...+|||++.+.+......... ..
T Consensus 16 G~~g~vy~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~----~~------ 81 (336)
T cd07849 16 GAYGMVCSATHK----PTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFES----FN------ 81 (336)
T ss_pred cCCeEEEEEEEc----CCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccc----cc------
Confidence 478999999752 2245566655432222223333445667788889999998665433211111 00
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
..-.+|+|+.+ +|.++++.. .++...++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++...
T Consensus 82 -~~~lv~e~~~~-~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 82 -DVYIVQELMET-DLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred -eEEEEehhccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 01136788765 888888653 57788999999999999999999999999999999999999999999999887643
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
....
T Consensus 158 ~~~~---------------------------------------------------------------------------- 161 (336)
T cd07849 158 PEHD---------------------------------------------------------------------------- 161 (336)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 1000
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHHHH
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERALA 536 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~~~ 536 (1092)
........+||++|+|||.+.+ ..++.++|||||||++|||++| |.......
T Consensus 162 ------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~ 217 (336)
T cd07849 162 ------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH 217 (336)
T ss_pred ------------------------ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 0001114568999999998765 5689999999999999999986 43221111
Q ss_pred --HHHHhcccc-------------------CCC--------CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 537 --AAMSDLRDR-------------------ILP--------PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 537 --~~~~~~~~~-------------------~~p--------~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
..+..+... ..+ ...+..++.+.+|+.+||+.+|.+|||+.++++||||..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~ 297 (336)
T cd07849 218 QLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQ 297 (336)
T ss_pred HHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccc
Confidence 101000000 000 012345678899999999999999999999999999987
Q ss_pred hhccch
Q 001366 588 FQEVCA 593 (1092)
Q Consensus 588 ~~~~~~ 593 (1092)
....+.
T Consensus 298 ~~~~~~ 303 (336)
T cd07849 298 YHDPSD 303 (336)
T ss_pred cCCCCC
Confidence 765543
No 285
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.94 E-value=3e-25 Score=241.51 Aligned_cols=282 Identities=16% Similarity=0.242 Sum_probs=236.4
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEC
Q 001366 779 ANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDA 858 (1092)
Q Consensus 779 ~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~ 858 (1092)
...++++...|..+.++|||.|+.+.+||... ........+|...|+.+.++++ ...+++++.|..|+||.+
T Consensus 219 ~pgi~ald~~~s~~~ilTGG~d~~av~~d~~s-------~q~l~~~~Gh~kki~~v~~~~~-~~~v~~aSad~~i~vws~ 290 (506)
T KOG0289|consen 219 TPGITALDIIPSSSKILTGGEDKTAVLFDKPS-------NQILATLKGHTKKITSVKFHKD-LDTVITASADEIIRVWSV 290 (506)
T ss_pred CCCeeEEeecCCCCcceecCCCCceEEEecch-------hhhhhhccCcceEEEEEEeccc-hhheeecCCcceEEeecc
Confidence 34677788888778999999999999999865 2334456789999999999998 888999999999999999
Q ss_pred CCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecC---CceEEEEEccCCCeEEEEEECC
Q 001366 859 CTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNI---ANVCCVQFSAHSSHLLAFGSAD 935 (1092)
Q Consensus 859 ~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~---~~V~sl~fsp~~~~~latgs~D 935 (1092)
....+......|..+|+.+..+| .+.+|+++|.|+++.+.|+++++++....+. -.+++.+|+||| .+|.+|..|
T Consensus 291 ~~~s~~~~~~~h~~~V~~ls~h~-tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDg-Lifgtgt~d 368 (506)
T KOG0289|consen 291 PLSSEPTSSRPHEEPVTGLSLHP-TGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDG-LIFGTGTPD 368 (506)
T ss_pred ccccCccccccccccceeeeecc-CCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCc-eEEeccCCC
Confidence 88888888889999999999999 8999999999999999999999998887764 348999999999 599999999
Q ss_pred CeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcC-CCCCeEEEE
Q 001366 936 YRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG-HTNEKNFVG 1013 (1092)
Q Consensus 936 g~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~-h~~~V~~v~ 1013 (1092)
+.|++||+.++. .+..+.+|.++|..|+|+ +|.+|++++.|+.|++||+|+.. ...++.- ...++++++
T Consensus 369 ~~vkiwdlks~~-~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~--------n~kt~~l~~~~~v~s~~ 439 (506)
T KOG0289|consen 369 GVVKIWDLKSQT-NVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLK--------NFKTIQLDEKKEVNSLS 439 (506)
T ss_pred ceEEEEEcCCcc-ccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhc--------ccceeeccccccceeEE
Confidence 999999999876 567899999999999999 77789999999999999999643 2233332 223799999
Q ss_pred EecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1014 LSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1014 ~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
|.+.|.|++.++.|=.|+++...+..-- .......|.+..+.+.|....++|+++|.|..++|+.+
T Consensus 440 fD~SGt~L~~~g~~l~Vy~~~k~~k~W~------------~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 440 FDQSGTYLGIAGSDLQVYICKKKTKSWT------------EIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred EcCCCCeEEeecceeEEEEEecccccce------------eeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence 9999999999988877777764332210 01123566777899999999999999999999998754
No 286
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.94 E-value=7.9e-27 Score=262.06 Aligned_cols=249 Identities=16% Similarity=0.122 Sum_probs=169.8
Q ss_pred cccceeeeCCCCCcccc-ccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKE-RRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
++.|.||+|...+.... .+..++.|+............-..+...+....||+++.+......+...+
T Consensus 17 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~----------- 85 (288)
T cd05061 17 GSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL----------- 85 (288)
T ss_pred CCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE-----------
Confidence 47899999865432221 122344444322111112122234455677788999987665533222222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcC---------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARG---------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~---------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
.+|||+.||+|.+++...+ ..++...++.++.||+.||.|||++||+||||||+||+++.++.+|+
T Consensus 86 -----lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 86 -----VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred -----EEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEE
Confidence 3799999999999996532 23455678899999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++........
T Consensus 161 ~Dfg~~~~~~~~~~~----------------------------------------------------------------- 175 (288)
T cd05061 161 GDFGMTRDIYETDYY----------------------------------------------------------------- 175 (288)
T ss_pred CcCCccccccccccc-----------------------------------------------------------------
Confidence 999988764310000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~- 528 (1092)
.......++..|+|||.+.+..++.++|||||||++|||++ +
T Consensus 176 ------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~ 219 (288)
T cd05061 176 ------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 219 (288)
T ss_pred ------------------------------------cccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCC
Confidence 00002234566999999998889999999999999999997 2
Q ss_pred --CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh------hhhhhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ------SEVTNE 587 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~------~~~~~~ 587 (1092)
|..... ......+.....++.....++.+.+++.+||+++|++||++.++++ ||+|.+
T Consensus 220 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~ 285 (288)
T cd05061 220 QPYQGLSN-EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE 285 (288)
T ss_pred CCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCC
Confidence 332221 1222222222233333345688999999999999999999999987 666654
No 287
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.94 E-value=8.5e-27 Score=258.00 Aligned_cols=245 Identities=16% Similarity=0.123 Sum_probs=174.7
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
+|.+++.++ +.|+||+|...+ .+..++.|+.... ........++..++...+||+++.++.....+...+
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~----~~~~~~~K~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~-- 78 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKK----YSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY-- 78 (263)
T ss_pred HeEEeeecCCcccceEEEEEEec----CCceEEEEEecCC--chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcE--
Confidence 344444444 569999988632 2445555554322 222233445666788889999998766543332222
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
.+|||+.|++|.+++.... ..++...++.++.|++.+|.|||++||+||||||+||++++++.+|
T Consensus 79 --------------lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~k 144 (263)
T cd05052 79 --------------IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVK 144 (263)
T ss_pred --------------EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEE
Confidence 3799999999999997643 4578878999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
++|||+++.......
T Consensus 145 l~df~~~~~~~~~~~----------------------------------------------------------------- 159 (263)
T cd05052 145 VADFGLSRLMTGDTY----------------------------------------------------------------- 159 (263)
T ss_pred eCCCcccccccccee-----------------------------------------------------------------
Confidence 999998866431000
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~ 528 (1092)
.......++..|+|||.+.+..++.++|||||||++|||++ +
T Consensus 160 -------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g 202 (263)
T cd05052 160 -------------------------------------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 202 (263)
T ss_pred -------------------------------------eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCC
Confidence 00001223456999999998899999999999999999997 4
Q ss_pred ---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|++.. .......+.....++.....++.+.+++.+||..+|++||++.++++.
T Consensus 203 ~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 203 MSPYPGID-LSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred CCCCCCCC-HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 43322 222223333322233334557889999999999999999999999874
No 288
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.94 E-value=6.8e-27 Score=267.89 Aligned_cols=257 Identities=13% Similarity=0.045 Sum_probs=174.4
Q ss_pred hhccccceeeeCCCCCccccccccccccccccccCchhh-HhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 218 TTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDA-ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 218 ~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
+..++.|+||++.. ...+..++.|++......... ....++..++...+|||++.+++....+...+
T Consensus 8 ~g~~~~~~v~~a~~----~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~-------- 75 (328)
T cd08226 8 RGFCNLTSVYLARH----TPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLW-------- 75 (328)
T ss_pred CcccCceeEEEEEE----cCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceE--------
Confidence 34457789999976 334667777766433222222 22333445556678999998776655433333
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
.+|+|+.+++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+||+++.++.+|++||+.
T Consensus 76 --------~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~ 147 (328)
T cd08226 76 --------VISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSH 147 (328)
T ss_pred --------EEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHH
Confidence 3799999999999997643 3577878899999999999999999999999999999999999999999975
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
.......... .+
T Consensus 148 ~~~~~~~~~~----------~~---------------------------------------------------------- 159 (328)
T cd08226 148 LYSLVRNGQK----------AK---------------------------------------------------------- 159 (328)
T ss_pred HhhhhccCcc----------cc----------------------------------------------------------
Confidence 4332100000 00
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC--CCCccccchhhhHHHHHHcCCCCcH-
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG--VCTTSSNIYSLGVLFFELFGRFDSE- 532 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~--~~t~~sDIwSLGvll~ell~~f~~~- 532 (1092)
.. . ... ....++..|+|||++.+. .++.++|||||||++|||++++.+.
T Consensus 160 ----~~--------------------~--~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~ 211 (328)
T cd08226 160 ----VV--------------------Y--DFP--QFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQ 211 (328)
T ss_pred ----cc--------------------c--ccc--ccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 00 0 000 011245569999999773 4789999999999999999863332
Q ss_pred --HHHHHHHHhccccCC---------------------------------------------CCCCCCCChhHHHHHHhc
Q 001366 533 --RALAAAMSDLRDRIL---------------------------------------------PPSFLSENPKEAGFCLWQ 565 (1092)
Q Consensus 533 --~~~~~~~~~~~~~~~---------------------------------------------p~~~~~~~~~~~~li~~l 565 (1092)
.........+..... .+.....++.+.+|+.+|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 291 (328)
T cd08226 212 DMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELC 291 (328)
T ss_pred CcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHH
Confidence 222222222111100 011122356788999999
Q ss_pred cccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 566 LHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 566 L~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
|..||.+|||+.|+|+||||.....
T Consensus 292 l~~dP~~Rpta~e~l~~~~~~~~~~ 316 (328)
T cd08226 292 LQQDPEKRPSASSLLSHAFFKQVKE 316 (328)
T ss_pred ccCCcccCCCHHHHhhCHHHHHHHH
Confidence 9999999999999999999987644
No 289
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.94 E-value=7e-27 Score=257.85 Aligned_cols=245 Identities=21% Similarity=0.182 Sum_probs=180.8
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|.||++...+ .+..++.|+..............++...+...+|||++.+..........+
T Consensus 11 ~g~~~~v~~~~~~~----~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~----------- 75 (264)
T cd06623 11 QGSSGVVYKVRHKP----TGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEIS----------- 75 (264)
T ss_pred ecCCeEEEEEEEcC----CCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEE-----------
Confidence 35788999987743 244455554433222222333445555667778999998766644332222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhh-cCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs-~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+|+|++|++|.+++... ..++...++.++.||++||+|||+ +|++||||+|+||+++.++.++++|||+++.
T Consensus 76 -----lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~ 149 (264)
T cd06623 76 -----IVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKV 149 (264)
T ss_pred -----EEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCcccee
Confidence 379999999999999765 457888999999999999999999 9999999999999999999999999998765
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.....
T Consensus 150 ~~~~~--------------------------------------------------------------------------- 154 (264)
T cd06623 150 LENTL--------------------------------------------------------------------------- 154 (264)
T ss_pred cccCC---------------------------------------------------------------------------
Confidence 43100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCC---cHH--
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFD---SER-- 533 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~---~~~-- 533 (1092)
.......++..|+|||.+.+..++.++|+|||||++|+|+++.. ...
T Consensus 155 ----------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~ 206 (264)
T cd06623 155 ----------------------------DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP 206 (264)
T ss_pred ----------------------------CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc
Confidence 00013456788999999999989999999999999999999632 221
Q ss_pred HHHHHHHhccccCCCCCCCC-CChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLS-ENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~-~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
........+.....++.... .+..+.+++.+||+++|+.||++.++++||||...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 207 SFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred CHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 22333344444444443334 57889999999999999999999999999999653
No 290
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.94 E-value=8.5e-27 Score=260.71 Aligned_cols=249 Identities=17% Similarity=0.073 Sum_probs=170.1
Q ss_pred HHHhhhc--cccceeeeCCCCCcccc-ccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKE-RRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
+.++..+ +|.|.||++...+.... .+..++.+..... .........++...+....|||++.+..........+
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~-- 83 (280)
T cd05092 7 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL-- 83 (280)
T ss_pred ceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC-CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE--
Confidence 3334444 47899999864332111 1223333332211 1122233344556778889999998665544322222
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCC
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARG--------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLK 356 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~--------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLK 356 (1092)
.+|||+.|++|.++|...+ ..++...++.++.||+.||+|||++||+|||||
T Consensus 84 --------------lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlk 149 (280)
T cd05092 84 --------------MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLA 149 (280)
T ss_pred --------------EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence 3799999999999997643 236777899999999999999999999999999
Q ss_pred CCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCC
Q 001366 357 PSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGN 436 (1092)
Q Consensus 357 P~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (1092)
|+||+++.++.+|++|||+++........
T Consensus 150 p~nil~~~~~~~kL~dfg~~~~~~~~~~~--------------------------------------------------- 178 (280)
T cd05092 150 TRNCLVGQGLVVKIGDFGMSRDIYSTDYY--------------------------------------------------- 178 (280)
T ss_pred HhhEEEcCCCCEEECCCCceeEcCCCcee---------------------------------------------------
Confidence 99999999999999999988654310000
Q ss_pred cccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccch
Q 001366 437 KIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIY 516 (1092)
Q Consensus 437 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIw 516 (1092)
.......++..|+|||.+.+..++.++|||
T Consensus 179 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 208 (280)
T cd05092 179 --------------------------------------------------RVGGRTMLPIRWMPPESILYRKFTTESDIW 208 (280)
T ss_pred --------------------------------------------------ecCCCccccccccCHHHhccCCcCchhhHH
Confidence 000022345679999999998999999999
Q ss_pred hhhHHHHHHcC-CCCc---HHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 517 SLGVLFFELFG-RFDS---ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 517 SLGvll~ell~-~f~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
||||++|||++ +..+ .......... .....++.....++.+.+|+.+||+.||.+||++.+|++
T Consensus 209 slG~il~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 209 SFGVVLWEIFTYGKQPWYQLSNTEAIECI-TQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HHHHHHHHHHcCCCCCCccCCHHHHHHHH-HcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99999999997 4332 2222222222 222222233355788999999999999999999999986
No 291
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.94 E-value=6e-27 Score=262.01 Aligned_cols=241 Identities=17% Similarity=0.192 Sum_probs=169.3
Q ss_pred cccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
++.|.||++... ..+..++.|...... ..........+...+...+|||++.+.+....+...+
T Consensus 11 g~~~~v~~~~~~----~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~----------- 75 (284)
T cd07860 11 GTYGVVYKARNK----LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLY----------- 75 (284)
T ss_pred CCceEEEEEEEC----CCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEE-----------
Confidence 578999998752 123444444332111 1112233445667788889999998776644322222
Q ss_pred ccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+|||+. ++|.+++... +..++...++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++.
T Consensus 76 -----~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~ 149 (284)
T cd07860 76 -----LVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARA 149 (284)
T ss_pred -----EEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhh
Confidence 3799996 5899998653 34678889999999999999999999999999999999999999999999998765
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+....
T Consensus 150 ~~~~~--------------------------------------------------------------------------- 154 (284)
T cd07860 150 FGVPV--------------------------------------------------------------------------- 154 (284)
T ss_pred cccCc---------------------------------------------------------------------------
Confidence 33100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC-CCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-CTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
.......++.+|+|||.+.+.. ++.++|||||||++|||+++ |.....
T Consensus 155 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~ 206 (284)
T cd07860 155 ----------------------------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 206 (284)
T ss_pred ----------------------------cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence 0001234678899999987744 68899999999999999986 433322
Q ss_pred HHHHHHhccccC-------------------CC--------CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 535 LAAAMSDLRDRI-------------------LP--------PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 535 ~~~~~~~~~~~~-------------------~p--------~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
............ .+ ......++.+.+|+.+||+.||++||+++++|.||||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 207 IDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 222211111000 00 0122356788899999999999999999999999997
No 292
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.94 E-value=7.2e-27 Score=260.39 Aligned_cols=244 Identities=18% Similarity=0.202 Sum_probs=171.0
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC---CCCCCCccccceecCCCCCCCccCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN---ASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
..++.|.||+|.... .+..++.|++.............++..++... .|||++........+...+
T Consensus 10 ~~g~~g~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~------- 78 (277)
T cd06917 10 GRGAYGAVYRGKHVP----TGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLW------- 78 (277)
T ss_pred eccCCceEEEEEEcC----CCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEE-------
Confidence 345789999998521 24555555542221111222222333344444 4898887554432221111
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
++|||+.|++|.++++.. .++...++.++.||+.||.|||++||+|+||+|+||+++.++.++++|||+
T Consensus 79 ---------lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~ 147 (277)
T cd06917 79 ---------IIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGV 147 (277)
T ss_pred ---------EEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCc
Confidence 389999999999999664 678889999999999999999999999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
+.......
T Consensus 148 ~~~~~~~~------------------------------------------------------------------------ 155 (277)
T cd06917 148 AALLNQNS------------------------------------------------------------------------ 155 (277)
T ss_pred eeecCCCc------------------------------------------------------------------------
Confidence 86643100
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCc
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDS 531 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~ 531 (1092)
.......|+..|+|||.+.+ ..++.++|+|||||++|+|+++ |..
T Consensus 156 -------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~ 204 (277)
T cd06917 156 -------------------------------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSD 204 (277)
T ss_pred -------------------------------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCC
Confidence 00013457888999999876 4578999999999999999986 333
Q ss_pred HHHHHHHHHhccccCCCCCCC--CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 532 ERALAAAMSDLRDRILPPSFL--SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 532 ~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
....... ..+... .++.+. ..++.+.+|+.+||..+|.+||++.+++.|+||.+..
T Consensus 205 ~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 205 VDAFRAM-MLIPKS-KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred CChhhhh-hccccC-CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 2222221 112222 222222 2567889999999999999999999999999997653
No 293
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.94 E-value=2.9e-27 Score=257.99 Aligned_cols=230 Identities=16% Similarity=0.099 Sum_probs=162.8
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
+|..|.||++... ..+..++.|........ . .+...+....|||++.+......+...+
T Consensus 3 ~g~~~~v~~~~~~----~~~~~~~~K~i~~~~~~-~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------- 61 (237)
T cd05576 3 LGVIDKVLLVMDT----RTQQTFILKGLRKSSEY-S-----RERLTIIPHCVPNMVCLHKYIVSEDSVF----------- 61 (237)
T ss_pred ccccceEEEEEEc----cCCcEEEEEeecchhhh-h-----hHHHHHHhcCCCceeehhhheecCCeEE-----------
Confidence 4556788887762 23455555554322211 1 1112233456899887665544322222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+|||+.|++|.+++.... .++...+..++.||+.||+|||++||+||||||+||+++.++.++++|||.+...
T Consensus 62 -----lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~ 135 (237)
T cd05576 62 -----LVLQHAEGGKLWSHISKFL-NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEV 135 (237)
T ss_pred -----EEEecCCCCCHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhcc
Confidence 3899999999999997654 4778899999999999999999999999999999999999999999999976543
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
...
T Consensus 136 ~~~----------------------------------------------------------------------------- 138 (237)
T cd05576 136 EDS----------------------------------------------------------------------------- 138 (237)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 200
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcHHHHHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAM 539 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~~~~~~~~ 539 (1092)
.....++..|+|||.+.+..++.++|+|||||++|||+++...........
T Consensus 139 -----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~ 189 (237)
T cd05576 139 -----------------------------CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI 189 (237)
T ss_pred -----------------------------cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc
Confidence 002234567999999988889999999999999999999743221110001
Q ss_pred HhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH-----HHHhhhhhh
Q 001366 540 SDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQSEVT 585 (1092)
Q Consensus 540 ~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa-----~eiL~~~~~ 585 (1092)
.......+| ...++.+++|+.+||++||++||++ .+++.||||
T Consensus 190 ~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 190 NTHTTLNIP---EWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred ccccccCCc---ccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 000111122 2346889999999999999999996 999999997
No 294
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.94 E-value=7.7e-27 Score=260.55 Aligned_cols=244 Identities=13% Similarity=0.088 Sum_probs=166.4
Q ss_pred cccceeeeCCCCCcccc-ccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKE-RRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
+|.|.||+|...+.-.. ++..++.|.+.............++...+...+|+|++.++.........+
T Consensus 17 g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~----------- 85 (277)
T cd05036 17 GAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRF----------- 85 (277)
T ss_pred CCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcE-----------
Confidence 47899999876431100 123333343322211222223344556778889999998766543222222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCC------CCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC---cEEE
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGH------KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN---QVKY 370 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~------~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~---~vkl 370 (1092)
.+|||+.|++|.++|...+. .++...++.++.||+.||+|||++||+||||||+||+++..+ .+|+
T Consensus 86 -----lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 86 -----ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred -----EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEe
Confidence 38999999999999966532 467778999999999999999999999999999999998765 5999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++.+......
T Consensus 161 ~dfg~~~~~~~~~~~----------------------------------------------------------------- 175 (277)
T cd05036 161 ADFGMARDIYRASYY----------------------------------------------------------------- 175 (277)
T ss_pred ccCccccccCCccce-----------------------------------------------------------------
Confidence 999988764310000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~- 528 (1092)
........+..|+|||++.+..++.++|||||||++|||++ +
T Consensus 176 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~ 219 (277)
T cd05036 176 ------------------------------------RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGY 219 (277)
T ss_pred ------------------------------------ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCC
Confidence 00001122346999999998899999999999999999996 4
Q ss_pred --CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|........ +..+.....++.....++.+.+|+.+||.++|++||++.++++|
T Consensus 220 ~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 220 MPYPGRTNQEV-MEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred CCCCCCCHHHH-HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 443222221 11111111122223456788999999999999999999999986
No 295
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.94 E-value=7.5e-27 Score=258.61 Aligned_cols=246 Identities=16% Similarity=0.081 Sum_probs=170.9
Q ss_pred cccceeeeCCCCCccccccccccccccccccC---ch-hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM---PS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
++.|.||+|...+ .+..++.|....... .. .......+...+....||+++.......... ....
T Consensus 13 g~~g~v~~~~~~~----~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-------~~~~ 81 (265)
T cd06652 13 GAFGRVYLCYDAD----TGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM-------ERTL 81 (265)
T ss_pred CCceEEEEEEEcC----CCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC-------CceE
Confidence 4679999997632 234445543321111 11 1223344566778889999987554322110 0011
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
+ .+|+|+.|++|.+++...+ .++...++.++.||+.+|+|||++||+|+||||+||+++.++.++++|||++
T Consensus 82 ~-------~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~ 153 (265)
T cd06652 82 S-------IFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGAS 153 (265)
T ss_pred E-------EEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccc
Confidence 1 3799999999999997664 4677789999999999999999999999999999999999999999999988
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+........
T Consensus 154 ~~~~~~~~~----------------------------------------------------------------------- 162 (265)
T cd06652 154 KRLQTICLS----------------------------------------------------------------------- 162 (265)
T ss_pred ccccccccc-----------------------------------------------------------------------
Confidence 754310000
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCc---HH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS---ER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~---~~ 533 (1092)
........|+..|+|||.+.+..++.++|||||||++|||+++..+ ..
T Consensus 163 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 213 (265)
T cd06652 163 -----------------------------GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE 213 (265)
T ss_pred -----------------------------ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc
Confidence 0001134578889999999988899999999999999999986332 22
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~ 586 (1092)
..............+......+..+.+++.+||. +|..||+++||++|||++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 214 AMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred hHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 2333222222222222223446778899999995 999999999999999984
No 296
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.94 E-value=9.7e-27 Score=260.58 Aligned_cols=252 Identities=14% Similarity=0.097 Sum_probs=171.0
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+...++ +.|+||++.... .+..++.|++...... .....++..++... .|||++.++..........
T Consensus 19 ~~~~~~~lg~g~~~~vy~~~~~~----~~~~~~ik~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~- 91 (286)
T cd06638 19 TWEIIETIGKGTYGKVFKVLNKK----NGSKAAVKILDPIHDI--DEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN- 91 (286)
T ss_pred ceeeeeeeccCCCcEEEEEEECC----CCceeEEEeeccccch--HHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC-
Confidence 344444443 679999987632 2445555554332211 12222344455555 6999998665432111000
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
... ..++|||++|++|.+++.. .+..++...+..++.||+.||.|||+++|+||||||+||+++.++
T Consensus 92 ---~~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 92 ---GDQ-------LWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEG 161 (286)
T ss_pred ---CCe-------EEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCC
Confidence 001 1248999999999999853 234577778999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+|++|||+++.+....
T Consensus 162 ~~kl~dfg~~~~~~~~~--------------------------------------------------------------- 178 (286)
T cd06638 162 GVKLVDFGVSAQLTSTR--------------------------------------------------------------- 178 (286)
T ss_pred CEEEccCCceeecccCC---------------------------------------------------------------
Confidence 99999999876543100
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-----CCCCccccchhhhHH
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----GVCTTSSNIYSLGVL 521 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----~~~t~~sDIwSLGvl 521 (1092)
.......|+..|+|||.+.. ..++.++|||||||+
T Consensus 179 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi 218 (286)
T cd06638 179 ----------------------------------------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGIT 218 (286)
T ss_pred ----------------------------------------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHH
Confidence 00013357888999999853 457899999999999
Q ss_pred HHHHcCC---CCcHHHHHHHHHhccccCCCCC-C-CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 522 FFELFGR---FDSERALAAAMSDLRDRILPPS-F-LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 522 l~ell~~---f~~~~~~~~~~~~~~~~~~p~~-~-~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
+|||+++ |............... ..+.. . ...+..+.+|+.+||+.+|.+||++.|||+|+||
T Consensus 219 ~~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 219 AIELGDGDPPLADLHPMRALFKIPRN-PPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred HHHHhcCCCCCCCCchhHHHhhcccc-CCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 9999986 3332222222222221 11111 1 1235678999999999999999999999999997
No 297
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.94 E-value=4.6e-27 Score=259.00 Aligned_cols=252 Identities=17% Similarity=0.174 Sum_probs=179.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.++.|.||++...+ .+..++.|+....... ........+..++...+|||++.+......+...+
T Consensus 3 ~g~~~~vy~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~--------- 69 (265)
T cd05579 3 KGAYGRVFLAKKKS----TGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLY--------- 69 (265)
T ss_pred CCCceEEEEEEECC----CCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEE---------
Confidence 35789999998742 2344555554322221 22333444556677788999998665543322222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
.+|+|+.|++|.+++...+ .++..+++.++.||+.||.|||++||+|+||+|+||++++++.++++|||++.
T Consensus 70 -------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~ 141 (265)
T cd05579 70 -------LVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSK 141 (265)
T ss_pred -------EEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccch
Confidence 3899999999999998765 57888999999999999999999999999999999999999999999999876
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
........ . .
T Consensus 142 ~~~~~~~~---~-----------------------------------------------------------~-------- 151 (265)
T cd05579 142 VGLVRRQI---N-----------------------------------------------------------L-------- 151 (265)
T ss_pred hcccCccc---c-----------------------------------------------------------c--------
Confidence 53310000 0 0
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
...........++..|+|||.+.+..++.++|+|||||++|||+++ |.....
T Consensus 152 -------------------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~ 206 (265)
T cd05579 152 -------------------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP 206 (265)
T ss_pred -------------------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH
Confidence 0000011134577889999999888899999999999999999986 333322
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH---HHHhhhhhhhh
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT---REILQSEVTNE 587 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa---~eiL~~~~~~~ 587 (1092)
.............++.....++.+.+|+.+||+.+|.+|||+ .++|+||||.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~ 262 (265)
T cd05579 207 EEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG 262 (265)
T ss_pred HHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence 222222222222233333357889999999999999999999 99999999975
No 298
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.94 E-value=1.2e-26 Score=262.79 Aligned_cols=244 Identities=17% Similarity=0.144 Sum_probs=169.6
Q ss_pred ccccceeeeCCCC----CccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCC
Q 001366 220 LKGKGIVCRGPPL----NAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTG 294 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1092)
.+|.|.||++... +.. .....++.|+..............++..++... .|||++.++.....+...+
T Consensus 25 ~G~~g~Vy~~~~~~~~~~~~-~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~------ 97 (304)
T cd05101 25 EGCFGQVVMAEALGIDKDKP-KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY------ 97 (304)
T ss_pred ccCCceEEEEEEeccCCCCC-CcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceE------
Confidence 3578999988531 111 112345555543322222223344555566666 7999998766544333222
Q ss_pred CCCccccCCCcccccCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCC
Q 001366 295 VPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSS 359 (1092)
Q Consensus 295 ~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~N 359 (1092)
.+|||+.+++|.++|.... ..++..+++.++.||+.||.|||++||+||||||+|
T Consensus 98 ----------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N 167 (304)
T cd05101 98 ----------VIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARN 167 (304)
T ss_pred ----------EEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccce
Confidence 3899999999999997642 235666789999999999999999999999999999
Q ss_pred eEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccc
Q 001366 360 FKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIE 439 (1092)
Q Consensus 360 ill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (1092)
|+++.++.+|++|||+++........
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~~------------------------------------------------------ 193 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDYY------------------------------------------------------ 193 (304)
T ss_pred EEEcCCCcEEECCCccceeccccccc------------------------------------------------------
Confidence 99999999999999998764410000
Q ss_pred ccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhh
Q 001366 440 TANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLG 519 (1092)
Q Consensus 440 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLG 519 (1092)
.......++..|+|||++.+..++.++||||||
T Consensus 194 -----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 226 (304)
T cd05101 194 -----------------------------------------------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 226 (304)
T ss_pred -----------------------------------------------ccccCCCCCceeeCchhhccCCCCchhhHHHHH
Confidence 000022345679999999988899999999999
Q ss_pred HHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 520 VLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 520 vll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|+||||++ + |... ........+.....+......+..+.+|+.+||+++|.+||++.++++.
T Consensus 227 ~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 227 VLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHHHcCCCCCcccC-CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 99999997 3 3221 2222333333332223334557888999999999999999999999985
No 299
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.94 E-value=8.8e-27 Score=256.15 Aligned_cols=241 Identities=19% Similarity=0.173 Sum_probs=175.6
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC----chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM----PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
.+|.|+||+|.... .+..++.|+...... .........+..+++..+||+++.+......+...+
T Consensus 10 ~g~~~~vy~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~------- 78 (258)
T cd06632 10 SGSFGSVYEGLNLD----DGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLY------- 78 (258)
T ss_pred ecCCceEEEEEEcC----CCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEE-------
Confidence 45789999998741 234455544322111 112233445566778889999997665433222112
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
+++||++|++|.+++...+ .++...++.++.||+.||.|||++||+|+||||+||+++.++.+|++|||+
T Consensus 79 ---------lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~ 148 (258)
T cd06632 79 ---------IFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGM 148 (258)
T ss_pred ---------EEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCcc
Confidence 3799999999999997664 467778999999999999999999999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
+.......
T Consensus 149 ~~~~~~~~------------------------------------------------------------------------ 156 (258)
T cd06632 149 AKQVVEFS------------------------------------------------------------------------ 156 (258)
T ss_pred ceeccccc------------------------------------------------------------------------
Confidence 76533100
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC-CCccccchhhhHHHHHHcCC---CCc
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-CTTSSNIYSLGVLFFELFGR---FDS 531 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~t~~sDIwSLGvll~ell~~---f~~ 531 (1092)
......|+..|+|||.+.... ++.++|+|||||++|+|+++ |..
T Consensus 157 --------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~ 204 (258)
T cd06632 157 --------------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQ 204 (258)
T ss_pred --------------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCccc
Confidence 001345788899999988766 89999999999999999986 333
Q ss_pred HHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 532 ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 532 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
................+......++.+.+|+.+||..+|.+||++.++|.|||+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 205 LEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred CcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 333333333222233333334457889999999999999999999999999996
No 300
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.94 E-value=8.5e-27 Score=264.99 Aligned_cols=260 Identities=16% Similarity=0.188 Sum_probs=174.9
Q ss_pred HHHhhhccccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCcc
Q 001366 214 FFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGAR 292 (1092)
Q Consensus 214 ~~~~~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (1092)
+.+-..++|.|.||++.... .+..++.|+..... ..........+...+...+|||++..+.....+...+
T Consensus 4 ~~i~~~~~~~~~v~~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~---- 75 (314)
T cd08216 4 TLIGKCFEDLMIVHLAKHKP----TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELY---- 75 (314)
T ss_pred hhhhHhhcCCceEEEEEecC----CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEE----
Confidence 44555655555554444321 24555565543321 2223344455566777889999998766544332222
Q ss_pred CCCCCccccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 293 TGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
.+|||+.+++|.+++... ...+++..+..+++||+.||+|||++||+||||||+||+++.++.+|++
T Consensus 76 ------------~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~ 143 (314)
T cd08216 76 ------------VVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLS 143 (314)
T ss_pred ------------EEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEe
Confidence 379999999999999753 3457777899999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||.+..+.......
T Consensus 144 d~~~~~~~~~~~~~~----------------------------------------------------------------- 158 (314)
T cd08216 144 GLRYSVSMIKHGKRQ----------------------------------------------------------------- 158 (314)
T ss_pred cCccceeeccccccc-----------------------------------------------------------------
Confidence 999887644110000
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC--CCCCccccchhhhHHHHHHcCC-
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~--~~~t~~sDIwSLGvll~ell~~- 528 (1092)
...........++..|+|||.+.. ..++.++|||||||++|||+++
T Consensus 159 -------------------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~ 207 (314)
T cd08216 159 -------------------------------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGH 207 (314)
T ss_pred -------------------------------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCC
Confidence 000000113456788999999876 4588999999999999999986
Q ss_pred --CCcHHHHHHHHHhcccc--------CCC------------------------CCCCCCChhHHHHHHhccccCCCCCC
Q 001366 529 --FDSERALAAAMSDLRDR--------ILP------------------------PSFLSENPKEAGFCLWQLHPEPLSRP 574 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~--------~~p------------------------~~~~~~~~~~~~li~~lL~~dP~~Rp 574 (1092)
|................ ..| +.....++.+.+|+.+||+++|++||
T Consensus 208 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 287 (314)
T cd08216 208 VPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRP 287 (314)
T ss_pred CCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCc
Confidence 43222222221111110 000 00111235678999999999999999
Q ss_pred CHHHHhhhhhhhhhh
Q 001366 575 TTREILQSEVTNEFQ 589 (1092)
Q Consensus 575 sa~eiL~~~~~~~~~ 589 (1092)
|+.++|+||||....
T Consensus 288 t~~~ll~~p~~~~~~ 302 (314)
T cd08216 288 SASQLLNHSFFKQCK 302 (314)
T ss_pred CHHHHhcCchHhhhc
Confidence 999999999998664
No 301
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=1.7e-27 Score=244.28 Aligned_cols=259 Identities=12% Similarity=0.094 Sum_probs=187.7
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchh-hHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..+-.|.|+++...+ .+..++.+++..++.+.+ -..+.++.+++...+|+|++.+++.......... +
T Consensus 26 gqGtfgeVFkAr~~n----~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~----r--- 94 (376)
T KOG0669|consen 26 GQGTFGEVFKARSKN----TGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTN----R--- 94 (376)
T ss_pred CCchHHHHHHHhhcC----ccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcc----c---
Confidence 333456788888744 455566655544444333 3557888888999999998877665444433331 1
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
|-.-...++.+|+. +|.-+|.....+++..++..++++++.||.|+|++.|+|||+||+|+||+.+|.+|++|||+++
T Consensus 95 -~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 95 -DRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred -ccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccccc
Confidence 00002236677764 8888887776788889999999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+..+..
T Consensus 173 ~fs~~~n------------------------------------------------------------------------- 179 (376)
T KOG0669|consen 173 AFSTSKN------------------------------------------------------------------------- 179 (376)
T ss_pred ceecccc-------------------------------------------------------------------------
Confidence 7552110
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
.....++..+-|.||++||.+.| ..|+++.|||.-|||+.||+++ |.+..
T Consensus 180 --------------------------~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnt 233 (376)
T KOG0669|consen 180 --------------------------VVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNT 233 (376)
T ss_pred --------------------------cCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCCh
Confidence 00122446788999999999998 6799999999999999999986 44433
Q ss_pred H--HHHHHHhccccCCCCCC-------------------------------CCCChhHHHHHHhccccCCCCCCCHHHHh
Q 001366 534 A--LAAAMSDLRDRILPPSF-------------------------------LSENPKEAGFCLWQLHPEPLSRPTTREIL 580 (1092)
Q Consensus 534 ~--~~~~~~~~~~~~~p~~~-------------------------------~~~~~~~~~li~~lL~~dP~~Rpsa~eiL 580 (1092)
+ ...+++.+...+-+..+ -...+..++|+..||.+||.+|+.+.++|
T Consensus 234 eqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~al 313 (376)
T KOG0669|consen 234 EQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQAL 313 (376)
T ss_pred HHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhh
Confidence 3 23334444433211110 01234678999999999999999999999
Q ss_pred hhhhhhhhh
Q 001366 581 QSEVTNEFQ 589 (1092)
Q Consensus 581 ~~~~~~~~~ 589 (1092)
.|+||...+
T Consensus 314 nh~~F~kdp 322 (376)
T KOG0669|consen 314 NHDFFWKDP 322 (376)
T ss_pred chhhhhcCC
Confidence 999997653
No 302
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.94 E-value=1.1e-26 Score=263.10 Aligned_cols=246 Identities=14% Similarity=0.112 Sum_probs=170.5
Q ss_pred ccccceeeeCCCCCcc-ccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAF-KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++...... ......++.|++..............+..++... .|||++.++.....+...+
T Consensus 45 ~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~--------- 115 (302)
T cd05055 45 AGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPIL--------- 115 (302)
T ss_pred ccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceE---------
Confidence 3467999988641110 1112344445443322222223334455667777 7999998776544333222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
.+|||+.|++|.+++.... ..++..+++.++.||+.||+|||++||+|+||||+||+++.++.+|++|||++
T Consensus 116 -------lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 116 -------VITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred -------EEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccc
Confidence 3899999999999997543 34788899999999999999999999999999999999999999999999988
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+........
T Consensus 189 ~~~~~~~~~----------------------------------------------------------------------- 197 (302)
T cd05055 189 RDIMNDSNY----------------------------------------------------------------------- 197 (302)
T ss_pred ccccCCCce-----------------------------------------------------------------------
Confidence 764310000
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSE 532 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~ 532 (1092)
.......++..|+|||.+.+..++.++|||||||++|||++ + |...
T Consensus 198 ------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~ 247 (302)
T cd05055 198 ------------------------------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGM 247 (302)
T ss_pred ------------------------------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCC
Confidence 00002235677999999999899999999999999999997 4 3222
Q ss_pred HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 533 RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 533 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
.........+.....++.....++.+.+|+.+||.++|++||++.++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~ 297 (302)
T cd05055 248 PVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQL 297 (302)
T ss_pred CchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 22222222222222223333457889999999999999999999999873
No 303
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.94 E-value=1.3e-26 Score=258.25 Aligned_cols=244 Identities=16% Similarity=0.110 Sum_probs=170.7
Q ss_pred cccceeeeCCCCCcc-ccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAF-KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
+|.|.||+|...+.. ......++.|+........+.....++..++....|||++.++.....+...+
T Consensus 17 g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~----------- 85 (277)
T cd05032 17 GSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL----------- 85 (277)
T ss_pred CCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE-----------
Confidence 578999998874322 11134455544422211122222334556677789999998766544332222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcC---------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARG---------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~---------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
++|||+.+++|.++|.... ..++...++.++.||+.||.|||++||+||||||+||+++.++.+|+
T Consensus 86 -----~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 86 -----VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred -----EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEE
Confidence 3899999999999996532 23566788999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++.+......
T Consensus 161 ~dfg~~~~~~~~~~~----------------------------------------------------------------- 175 (277)
T cd05032 161 GDFGMTRDIYETDYY----------------------------------------------------------------- 175 (277)
T ss_pred CCcccchhhccCccc-----------------------------------------------------------------
Confidence 999988764311000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~- 528 (1092)
.......++..|+|||.+.+..++.++|||||||++|||++ +
T Consensus 176 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~ 219 (277)
T cd05032 176 ------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAE 219 (277)
T ss_pred ------------------------------------ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCC
Confidence 00012345667999999988889999999999999999997 4
Q ss_pred --CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|.... .......+.....++.....++.+.+|+.+||+++|++|||+.+|+..
T Consensus 220 ~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 274 (277)
T cd05032 220 QPYQGLS-NEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSS 274 (277)
T ss_pred CCCccCC-HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 43222 222233333333333333447888999999999999999999999863
No 304
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.94 E-value=1.1e-26 Score=256.15 Aligned_cols=243 Identities=16% Similarity=0.118 Sum_probs=171.6
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.++ +.|+||++...+ ....+.|+....... .....++..++....|||++........+...+
T Consensus 6 ~~~~~~lg~G~~~~v~~~~~~~-----~~~~~iK~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~--- 75 (256)
T cd05059 6 LTFLKELGSGQFGVVHLGKWRG-----KIDVAIKMIREGAMS--EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIF--- 75 (256)
T ss_pred cchhhhhccCCCceEEEeEecC-----CccEEEEEeccCCCC--HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceE---
Confidence 44444443 579999987632 334455554322221 122334566777889999887655433222222
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
.+|||++|++|.+++......++...++.++.||+.||.|||++||+||||||+||+++.++.+|++
T Consensus 76 -------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~ 142 (256)
T cd05059 76 -------------IVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVS 142 (256)
T ss_pred -------------EEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEEC
Confidence 3799999999999997765577888999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++...+....
T Consensus 143 dfg~~~~~~~~~~~------------------------------------------------------------------ 156 (256)
T cd05059 143 DFGLARYVLDDQYT------------------------------------------------------------------ 156 (256)
T ss_pred Ccccceeccccccc------------------------------------------------------------------
Confidence 99988654310000
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C--
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R-- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~-- 528 (1092)
......++..|+|||.+.+..++.++|||||||++|||++ +
T Consensus 157 ------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~ 200 (256)
T cd05059 157 ------------------------------------SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKM 200 (256)
T ss_pred ------------------------------------ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCC
Confidence 0001112346999999999899999999999999999997 3
Q ss_pred -CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 -FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 -f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|....... ....+.....++.....++.+.+++.+||+++|++|||+.++++.
T Consensus 201 p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 201 PYERFSNSE-VVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred CCCCCCHHH-HHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 33222222 222222222233334467889999999999999999999999874
No 305
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.94 E-value=9.2e-27 Score=263.70 Aligned_cols=244 Identities=16% Similarity=0.050 Sum_probs=170.1
Q ss_pred hhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 218 TTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 218 ~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
-..+|.|.||+|.....-......++.|+..............++..++....|||++..+.......
T Consensus 15 lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~------------ 82 (303)
T cd05110 15 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPT------------ 82 (303)
T ss_pred cccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCC------------
Confidence 34457899999875221111011234444432222222223345556778889999998665432111
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
...+++|+.+|+|.+++......++...++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++
T Consensus 83 -----~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 83 -----IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (303)
T ss_pred -----ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccc
Confidence 113799999999999998776667888899999999999999999999999999999999999999999999887
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.......
T Consensus 158 ~~~~~~~------------------------------------------------------------------------- 164 (303)
T cd05110 158 LLEGDEK------------------------------------------------------------------------- 164 (303)
T ss_pred cccCccc-------------------------------------------------------------------------
Confidence 6431000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcH-
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSE- 532 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~- 532 (1092)
........++..|+|||.+.+..++.++|||||||++|||++ + |...
T Consensus 165 ----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~ 216 (303)
T cd05110 165 ----------------------------EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP 216 (303)
T ss_pred ----------------------------ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 000002234667999999998899999999999999999986 3 3322
Q ss_pred -HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 533 -RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 533 -~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
......+ .....++.....+..+.+++..||..+|.+||+++++++.
T Consensus 217 ~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 217 TREIPDLL---EKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred HHHHHHHH---HCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 2222222 2222233334457889999999999999999999999874
No 306
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.94 E-value=1.5e-26 Score=256.75 Aligned_cols=251 Identities=14% Similarity=0.050 Sum_probs=173.8
Q ss_pred hccccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..+|.|+||+|...+.... ...++.|+..... .........++...+....|||++.++.......... ....+.
T Consensus 8 g~G~~g~v~~~~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~---~~~~~~ 83 (273)
T cd05035 8 GEGEFGSVMEGQLSQDDGS-QLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQ---KIPKPM 83 (273)
T ss_pred CcCCCceEEEEEEecCCCC-cceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccc---cCcccE
Confidence 3467899999976331111 2344554432221 2223344556667788889999997665533222211 112222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhc-----CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEec
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNAR-----GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIG 372 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~-----~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~D 372 (1092)
.+|+|+.+++|.+++... ...++...++.++.||+.||+|||++||+||||||+||+++..+.+|++|
T Consensus 84 -------~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 84 -------VILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred -------EEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECC
Confidence 379999999999998442 13577778999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCC
Q 001366 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1092)
Q Consensus 373 fg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 452 (1092)
||+++.........
T Consensus 157 fg~~~~~~~~~~~~------------------------------------------------------------------ 170 (273)
T cd05035 157 FGLSKKIYSGDYYR------------------------------------------------------------------ 170 (273)
T ss_pred ccceeecccccccc------------------------------------------------------------------
Confidence 99987643110000
Q ss_pred CCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---
Q 001366 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R--- 528 (1092)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~--- 528 (1092)
......++..|+|||.+.+..++.++|||||||++|||++ +
T Consensus 171 -----------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p 215 (273)
T cd05035 171 -----------------------------------QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTP 215 (273)
T ss_pred -----------------------------------ccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCC
Confidence 0001123456999999988889999999999999999997 4
Q ss_pred CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|...... ..+..+.....++.....++.+.+++.+||..||.+||++.|++++
T Consensus 216 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 216 YPGVENH-EIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred CCCCCHH-HHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 3333222 2233333333334444567889999999999999999999999875
No 307
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.94 E-value=3.1e-27 Score=242.96 Aligned_cols=224 Identities=15% Similarity=0.098 Sum_probs=162.4
Q ss_pred chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc-cCCCcccccCCCCCHHHHHhh---cCCCCCH
Q 001366 253 PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW-IGGLRQGSSDHGVNLREWLNA---RGHKGKR 328 (1092)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~GgsL~~~l~~---~~~~~~~ 328 (1092)
..+.+.+.++...-+..+|||++.+++..+-+.- + | +.-.++..|+..|+|.+.|.. .|..+++
T Consensus 59 ~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~-D-----------~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE 126 (302)
T KOG2345|consen 59 QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEK-D-----------GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSE 126 (302)
T ss_pred hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhc-c-----------CceeEEEEeehhccccHHHHHHHHhhcCCccCH
Confidence 4456777788877888899999887665442221 0 1 112347889999999999844 5667899
Q ss_pred HHHHHHHHHHHHHHHHhhhcC--ccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhcccccccccc
Q 001366 329 IECLYIFRQIVALVDYHHTQG--VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFT 406 (1092)
Q Consensus 329 ~~~~~i~~qil~~l~~lHs~g--IvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 406 (1092)
.+++.||.+|++||+++|... ++||||||+|||+..++.+++.|||.+....-..
T Consensus 127 ~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i----------------------- 183 (302)
T KOG2345|consen 127 AQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQI----------------------- 183 (302)
T ss_pred HHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEe-----------------------
Confidence 999999999999999999999 9999999999999999999999999887643100
Q ss_pred ccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccc
Q 001366 407 TGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQS 486 (1092)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (1092)
..+......
T Consensus 184 -----------------------------------------------------------------------~~~~~a~~l 192 (302)
T KOG2345|consen 184 -----------------------------------------------------------------------EGSRQALRL 192 (302)
T ss_pred -----------------------------------------------------------------------echHHHHHH
Confidence 000000112
Q ss_pred cccccccccccccCcccccC---CCCCccccchhhhHHHHHHcCCCCcHHHHHHH-----HHhccccCCCCCCCCCChhH
Q 001366 487 TSVSEQLEEKWYASPEELSG---GVCTTSSNIYSLGVLFFELFGRFDSERALAAA-----MSDLRDRILPPSFLSENPKE 558 (1092)
Q Consensus 487 ~~~~~~~gt~~Y~aPE~l~~---~~~t~~sDIwSLGvll~ell~~f~~~~~~~~~-----~~~~~~~~~p~~~~~~~~~~ 558 (1092)
+.......|..|+|||++.- ...+.++|||||||+||+|+.+-.+.+...+- +.......-.|+....+..+
T Consensus 193 Qe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l 272 (302)
T KOG2345|consen 193 QEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEAL 272 (302)
T ss_pred HHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHH
Confidence 22234455777999999875 44689999999999999999764443333321 11222222334444467889
Q ss_pred HHHHHhccccCCCCCCCHHHHhhh
Q 001366 559 AGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 559 ~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
..|+.+||+.||.+||++.+++.+
T Consensus 273 ~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 273 HQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred HHHHHHHhcCCcccCCCHHHHHHH
Confidence 999999999999999999999874
No 308
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.94 E-value=1.8e-26 Score=253.03 Aligned_cols=240 Identities=13% Similarity=0.090 Sum_probs=170.3
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..+|.|.||+|...+ +..++.|+...............+..++....|||++...+........+
T Consensus 4 g~g~~g~vy~~~~~~-----~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~---------- 68 (250)
T cd05085 4 GKGNFGEVFKGTLKD-----KTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIY---------- 68 (250)
T ss_pred CCCCCceEEEEEecC-----CcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccE----------
Confidence 357889999997644 33344444322211111222334556677889999998766543222222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+|||++|++|.+++......+++..++.++.|++.+|.|+|++|++||||||+||+++.++.+|++|||++..
T Consensus 69 ------lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 142 (250)
T cd05085 69 ------IVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQ 142 (250)
T ss_pred ------EEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCcccee
Confidence 48999999999999977656678889999999999999999999999999999999999999999999998764
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.......
T Consensus 143 ~~~~~~~------------------------------------------------------------------------- 149 (250)
T cd05085 143 EDDGIYS------------------------------------------------------------------------- 149 (250)
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 3210000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~ 534 (1092)
. .....++..|+|||.+.+..++.++|||||||++|||++ + |.....
T Consensus 150 ---------------------------~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~ 200 (250)
T cd05085 150 ---------------------------S--SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN 200 (250)
T ss_pred ---------------------------c--CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH
Confidence 0 001122456999999998889999999999999999997 3 433322
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
. .....+.....+......++.+.+|+.+||.++|.+||++.++++.
T Consensus 201 ~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 201 Q-QAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred H-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 2 2222222222223334457889999999999999999999999863
No 309
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=3.2e-25 Score=265.75 Aligned_cols=292 Identities=18% Similarity=0.278 Sum_probs=237.1
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEe--CCCcEEEEEcCCCCCC----Ccc-cccceeeecCCCCeEEEEEecCCCCEEEEE
Q 001366 775 FNNSANVICSISFDRDEDHFAAAG--VSKKIKIFEFNALFND----SVD-VYYPAVEMSNRSKLSCVCWNNYIKNYLASA 847 (1092)
Q Consensus 775 l~~h~~~V~sl~fspdg~~latgg--~D~~I~Iwd~~~~~~~----~~~-~~~~~~~~~h~~~V~~v~~sp~~~~~LaSg 847 (1092)
+.++...|.+|+.+|||..+|||| .|+.+.||+....... ... .........|.+.|+|+.|+++ +.+||+|
T Consensus 9 v~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~d-G~~lAsG 87 (942)
T KOG0973|consen 9 VNHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPD-GSYLASG 87 (942)
T ss_pred cccCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCC-CCeEeec
Confidence 446677899999999999999999 9999999997753211 111 1122334569999999999998 9999999
Q ss_pred ECCCcEEEEECCC----------C--------ceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeee
Q 001366 848 DYDGVVKLWDACT----------G--------QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLAT 909 (1092)
Q Consensus 848 s~DgtV~IWD~~t----------g--------~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~ 909 (1092)
|.|+.|.||+... | +++..+.+|...|..++|+| ++.+|||+|.|++|.|||.++.+++.+
T Consensus 88 SDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp-~~~~lvS~s~DnsViiwn~~tF~~~~v 166 (942)
T KOG0973|consen 88 SDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP-DDSLLVSVSLDNSVIIWNAKTFELLKV 166 (942)
T ss_pred cCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC-CccEEEEecccceEEEEccccceeeee
Confidence 9999999999762 1 36778999999999999999 899999999999999999999999988
Q ss_pred Ee-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCC------CCCeEEEEEc-CCCEEEEEE----CC
Q 001366 910 IK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGH------EKAVSYVKFL-DSGTLVTAS----TD 977 (1092)
Q Consensus 910 l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H------~~~V~~v~fs-~~~~L~Sgs----~D 977 (1092)
+. |.+.|-.+.|+|-|. +||+-+.|++|+||++.+... .+...++ ...+..+.|+ ++.+|++.. .-
T Consensus 167 l~~H~s~VKGvs~DP~Gk-y~ASqsdDrtikvwrt~dw~i-~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~ 244 (942)
T KOG0973|consen 167 LRGHQSLVKGVSWDPIGK-YFASQSDDRTLKVWRTSDWGI-EKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGK 244 (942)
T ss_pred eecccccccceEECCccC-eeeeecCCceEEEEEccccee-eEeeccchhhCCCcceeeecccCCCcCeecchhhccCCc
Confidence 88 678899999999995 999999999999999876432 2333222 3457889999 666777654 23
Q ss_pred CeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecC-----CC------------EEEEEecCCcEEEEeCCCCCc
Q 001366 978 NKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTA-----DG------------YIACGSESNEVYAYHRSLPMP 1040 (1092)
Q Consensus 978 g~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spd-----g~------------~lasgs~Dg~I~Iwd~~~~~~ 1040 (1092)
.++.|.+-. ....-..+-||..++.++.|+|. .+ .+|+||.|++|-||......|
T Consensus 245 ~~~~IieR~--------tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RP 316 (942)
T KOG0973|consen 245 STIAIIERG--------TWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRP 316 (942)
T ss_pred ceeEEEecC--------CceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCc
Confidence 467888766 34456788899999999999982 11 678999999999999988888
Q ss_pred eeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1041 ITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1041 i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
+..++ +-.+..|..++|+|||..|.++|.||+|.++.+
T Consensus 317 l~vi~-------------~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~F 354 (942)
T KOG0973|consen 317 LFVIH-------------NLFNKSIVDMSWSPDGFSLFACSLDGTVALIHF 354 (942)
T ss_pred hhhhh-------------hhhcCceeeeeEcCCCCeEEEEecCCeEEEEEc
Confidence 77654 122567999999999999999999999998864
No 310
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.94 E-value=4.9e-27 Score=262.69 Aligned_cols=242 Identities=17% Similarity=0.219 Sum_probs=171.5
Q ss_pred ccccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.++.|.||++... ..+..++.|++.... ..........+..++...+|||++.+++........+
T Consensus 11 ~g~~~~v~~~~~~----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~---------- 76 (286)
T cd07847 11 EGSYGVVFKCRNR----ETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLH---------- 76 (286)
T ss_pred ccCCeEEEEEEEC----CCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEE----------
Confidence 3467999998763 224455555442211 1112223345666788889999988766544322222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+|||+++++|..++.... .++..+++.++.||+.+|.|||++||+||||||+||+++.++.+|++|||++..
T Consensus 77 ------~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 149 (286)
T cd07847 77 ------LVFEYCDHTVLNELEKNPR-GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARI 149 (286)
T ss_pred ------EEEeccCccHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECcccccee
Confidence 3899999999998876544 477889999999999999999999999999999999999999999999998876
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+.....
T Consensus 150 ~~~~~~-------------------------------------------------------------------------- 155 (286)
T cd07847 150 LTGPGD-------------------------------------------------------------------------- 155 (286)
T ss_pred cCCCcc--------------------------------------------------------------------------
Confidence 431000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
......++.+|+|||.+.+ ..++.++|||||||++|||+++ |.+...
T Consensus 156 -----------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~ 206 (286)
T cd07847 156 -----------------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSD 206 (286)
T ss_pred -----------------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 0012346788999999876 5579999999999999999986 433222
Q ss_pred HHHHHH---hccc-----------------cCCCC---------CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 535 LAAAMS---DLRD-----------------RILPP---------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 535 ~~~~~~---~~~~-----------------~~~p~---------~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
....+. .+.. ...|. .+...++.+.+|+.+||+++|++||++.|++.||||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 207 VDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred HHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 222111 1100 00111 123456778899999999999999999999999997
No 311
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.94 E-value=1e-26 Score=263.29 Aligned_cols=260 Identities=13% Similarity=0.116 Sum_probs=174.3
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCch-hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.+ ++.|.||++.... .+..++.|+........ ......++..++...+|||++.+.+........+
T Consensus 14 y~~~~~lg~g~~~~v~~~~~~~----~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~-- 87 (310)
T cd07865 14 YEKLAKIGQGTFGEVFKARHKK----TKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPY-- 87 (310)
T ss_pred eEEEEEeecCCCEEEEEEEECC----CCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccc--
Confidence 4444444 4789999998632 34555655443222111 1222345667788889999998665433222111
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
... ......+|||+.+ +|.+++......++..+++.++.||+.||.|||++||+|+||||+||+++.++.+|+
T Consensus 88 ~~~------~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl 160 (310)
T cd07865 88 NRY------KGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKL 160 (310)
T ss_pred cCC------CceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEE
Confidence 000 0112347888875 899998776667888899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||++..+......
T Consensus 161 ~dfg~~~~~~~~~~~----------------------------------------------------------------- 175 (310)
T cd07865 161 ADFGLARAFSLSKNS----------------------------------------------------------------- 175 (310)
T ss_pred CcCCCcccccCCccc-----------------------------------------------------------------
Confidence 999998764411000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHcCC-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell~~- 528 (1092)
........+++..|+|||.+.+. .++.++|||||||++|||+++
T Consensus 176 ----------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~ 221 (310)
T cd07865 176 ----------------------------------KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRS 221 (310)
T ss_pred ----------------------------------CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCC
Confidence 00001134578889999998764 478999999999999999986
Q ss_pred --CCcHHHHH--HHHHhccccCCCC------------------C----------CCCCChhHHHHHHhccccCCCCCCCH
Q 001366 529 --FDSERALA--AAMSDLRDRILPP------------------S----------FLSENPKEAGFCLWQLHPEPLSRPTT 576 (1092)
Q Consensus 529 --f~~~~~~~--~~~~~~~~~~~p~------------------~----------~~~~~~~~~~li~~lL~~dP~~Rpsa 576 (1092)
|....... ..+..+.....++ . ....++.+.+|+.+||++||.+|||+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~ 301 (310)
T cd07865 222 PIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDA 301 (310)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCH
Confidence 33322211 1111111111100 0 01134667899999999999999999
Q ss_pred HHHhhhhhh
Q 001366 577 REILQSEVT 585 (1092)
Q Consensus 577 ~eiL~~~~~ 585 (1092)
+++|+||||
T Consensus 302 ~e~l~h~~f 310 (310)
T cd07865 302 DTALNHDFF 310 (310)
T ss_pred HHHhcCCCC
Confidence 999999997
No 312
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.94 E-value=7.9e-27 Score=270.20 Aligned_cols=247 Identities=16% Similarity=0.187 Sum_probs=170.8
Q ss_pred ccccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.+|.|+||++.... .+..++.|+..... .........++..++...+|||++.++.....+.... ..
T Consensus 26 ~g~~g~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-----~~--- 93 (353)
T cd07850 26 SGAQGIVCAAYDTV----TGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLE-----EF--- 93 (353)
T ss_pred cCCCEEEEEEEECC----CCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcc-----cc---
Confidence 34789999997632 24555665543221 1222334456677788889999998765533221110 00
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
...-.+|||+.| +|.+++... ++..++..++.||+.||+|||++||+||||||+||+++.++.+|++|||+++.
T Consensus 94 --~~~~lv~e~~~~-~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 167 (353)
T cd07850 94 --QDVYLVMELMDA-NLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 167 (353)
T ss_pred --CcEEEEEeccCC-CHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCcccee
Confidence 001247899865 899888654 77778999999999999999999999999999999999999999999998865
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.....
T Consensus 168 ~~~~~--------------------------------------------------------------------------- 172 (353)
T cd07850 168 AGTSF--------------------------------------------------------------------------- 172 (353)
T ss_pred CCCCC---------------------------------------------------------------------------
Confidence 33100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
......+|+.|+|||.+.+..++.++|||||||+||+|+++ |......
T Consensus 173 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~ 223 (353)
T cd07850 173 -----------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI 223 (353)
T ss_pred -----------------------------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH
Confidence 00133578889999999999999999999999999999986 4332221
Q ss_pred HHHHHhcc----------------------ccC---------------CCCC----CCCCChhHHHHHHhccccCCCCCC
Q 001366 536 AAAMSDLR----------------------DRI---------------LPPS----FLSENPKEAGFCLWQLHPEPLSRP 574 (1092)
Q Consensus 536 ~~~~~~~~----------------------~~~---------------~p~~----~~~~~~~~~~li~~lL~~dP~~Rp 574 (1092)
......+. .+. .+.. ....++.+.+|+.+||++||++||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 303 (353)
T cd07850 224 DQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRI 303 (353)
T ss_pred HHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCc
Confidence 11111000 000 0000 001234578999999999999999
Q ss_pred CHHHHhhhhhhhhh
Q 001366 575 TTREILQSEVTNEF 588 (1092)
Q Consensus 575 sa~eiL~~~~~~~~ 588 (1092)
|+.|+|+||||...
T Consensus 304 t~~eiL~~~~~~~~ 317 (353)
T cd07850 304 SVDDALQHPYINVW 317 (353)
T ss_pred CHHHHhcChhHhhc
Confidence 99999999999753
No 313
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.94 E-value=7.7e-27 Score=256.84 Aligned_cols=238 Identities=18% Similarity=0.145 Sum_probs=173.4
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
++.|.||++... ..+..++.|.+..............+...++..+|||++.+.+....+...+
T Consensus 11 g~~g~v~~~~~~----~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~------------ 74 (255)
T cd08219 11 GSFGRALLVQHV----NSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLY------------ 74 (255)
T ss_pred cCCeEEEEEEEc----CCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEE------------
Confidence 467888888652 2234444444322222233344445566778889999998776655433333
Q ss_pred cCCCcccccCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+|+|+.|++|.+++.. .+..++...++.++.||+.||.|||++||+|+||||+||+++.++.++++|||+++..
T Consensus 75 ----lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~ 150 (255)
T cd08219 75 ----IVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLL 150 (255)
T ss_pred ----EEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceee
Confidence 37999999999999965 3445778789999999999999999999999999999999999999999999988654
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
....
T Consensus 151 ~~~~---------------------------------------------------------------------------- 154 (255)
T cd08219 151 TSPG---------------------------------------------------------------------------- 154 (255)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 3100
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALA 536 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~ 536 (1092)
.......|++.|+|||++.+..++.++|+|||||++|+|+++ |.......
T Consensus 155 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~ 207 (255)
T cd08219 155 ---------------------------AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN 207 (255)
T ss_pred ---------------------------cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH
Confidence 000134578889999999988899999999999999999986 43332222
Q ss_pred HHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 537 AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 537 ~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
. ...+.....++.....+..+.+|+.+||..+|.+||++.+|+.-
T Consensus 208 ~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 208 L-ILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred H-HHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 2 22233333333344557889999999999999999999999863
No 314
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.94 E-value=7.8e-27 Score=262.57 Aligned_cols=247 Identities=16% Similarity=0.168 Sum_probs=167.2
Q ss_pred cccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
++.|.||+|.... .+..++.|+...... ........++...+... .|||++.+......+.... ....+
T Consensus 12 g~~g~vy~~~~~~----~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~----~~~~~- 82 (295)
T cd07837 12 GTYGKVYKARDKN----TGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNG----KPSLY- 82 (295)
T ss_pred cCCeEEEEEEECC----CCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCC----CceEE-
Confidence 4689999997632 234445544321111 11112233344555555 5699987765544332200 11111
Q ss_pred cccCCCcccccCCCCCHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc-CCcEEEecc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNAR----GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGP 373 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~----~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~-~~~vkl~Df 373 (1092)
++|+|++| +|.+++... +..++...++.++.||+.||.|||++||+||||||+||+++. ++.+|++||
T Consensus 83 ------lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 83 ------LVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred ------EEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeec
Confidence 37999987 899998543 235788899999999999999999999999999999999998 889999999
Q ss_pred cccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCC
Q 001366 374 IIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPH 453 (1092)
Q Consensus 374 g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 453 (1092)
|+++.+..+.
T Consensus 156 g~~~~~~~~~---------------------------------------------------------------------- 165 (295)
T cd07837 156 GLGRAFSIPV---------------------------------------------------------------------- 165 (295)
T ss_pred ccceecCCCc----------------------------------------------------------------------
Confidence 9876533100
Q ss_pred CCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---C
Q 001366 454 SHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---F 529 (1092)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f 529 (1092)
...+...++++|+|||.+.+ ..++.++|||||||++|||+++ |
T Consensus 166 ---------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~ 212 (295)
T cd07837 166 ---------------------------------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLF 212 (295)
T ss_pred ---------------------------------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCC
Confidence 00012346788999999876 4579999999999999999986 4
Q ss_pred CcHHHHHHHHHhccc------cC------------C---CC-----CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 530 DSERALAAAMSDLRD------RI------------L---PP-----SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 530 ~~~~~~~~~~~~~~~------~~------------~---p~-----~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
.+............. .. . .+ .....++++.+||.+||+++|.+||++.|+|.||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~ 292 (295)
T cd07837 213 PGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHP 292 (295)
T ss_pred CCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCC
Confidence 333333222221110 00 0 00 1134577889999999999999999999999999
Q ss_pred hhh
Q 001366 584 VTN 586 (1092)
Q Consensus 584 ~~~ 586 (1092)
||+
T Consensus 293 ~~~ 295 (295)
T cd07837 293 YFD 295 (295)
T ss_pred CcC
Confidence 984
No 315
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.94 E-value=7.5e-27 Score=261.06 Aligned_cols=242 Identities=17% Similarity=0.163 Sum_probs=168.9
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCch-h-hHhh---hhhhhhhccCCCCCCCccccceecCCCCCCCccCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-D-AALK---AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTG 294 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1092)
.++.|.||++...+ .++.++.|+........ . .... ....+++....||+++........+...+
T Consensus 4 ~g~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------ 73 (278)
T cd05606 4 RGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS------ 73 (278)
T ss_pred cCCCeEEEEEEEec----CCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEE------
Confidence 46789999887532 24556665543222111 1 1111 12223445567888876544433222222
Q ss_pred CCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccc
Q 001366 295 VPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1092)
Q Consensus 295 ~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg 374 (1092)
.+|||+.|++|.+++...+ .+++.+++.++.|++.||.|||++||+||||||+||+++.++.+|++|||
T Consensus 74 ----------~v~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg 142 (278)
T cd05606 74 ----------FILDLMNGGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG 142 (278)
T ss_pred ----------EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCc
Confidence 3799999999999997654 57788999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++.+....
T Consensus 143 ~~~~~~~~~----------------------------------------------------------------------- 151 (278)
T cd05606 143 LACDFSKKK----------------------------------------------------------------------- 151 (278)
T ss_pred CccccCccC-----------------------------------------------------------------------
Confidence 876532100
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHcCC---CC
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGR---FD 530 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell~~---f~ 530 (1092)
.....|+..|+|||.+.++ .++.++||||+||++|||+++ |.
T Consensus 152 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~ 197 (278)
T cd05606 152 ----------------------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 197 (278)
T ss_pred ----------------------------------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCC
Confidence 0023578889999999754 689999999999999999986 32
Q ss_pred cHH--HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 531 SER--ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 531 ~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
... ...... .......++.....++.+.+++.+||..+|.+|| ++.++++||||...
T Consensus 198 ~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~ 261 (278)
T cd05606 198 QHKTKDKHEID-RMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSL 261 (278)
T ss_pred CCCccchHHHH-HHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCC
Confidence 221 111111 1111111122223478899999999999999999 99999999999774
No 316
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.94 E-value=1.4e-26 Score=259.67 Aligned_cols=245 Identities=17% Similarity=0.193 Sum_probs=179.6
Q ss_pred hhhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 217 KTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 217 ~~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
+...+|.|.||++.... .+..++.|+...... .......+..++...+|+|++........+...+
T Consensus 26 ~l~~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~-------- 91 (286)
T cd06614 26 KIGEGASGEVYKATDRA----TGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVGDELW-------- 91 (286)
T ss_pred hccCCCCeEEEEEEEcc----CCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEE--------
Confidence 44455789999998741 234455554432222 2333445556778889999988776655443333
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
.+++|++|++|.+++......++..++..++.||+.||.|||+.||+|+||||+||+++.++.++++|||++
T Consensus 92 --------lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~ 163 (286)
T cd06614 92 --------VVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFA 163 (286)
T ss_pred --------EEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchh
Confidence 379999999999999876656888899999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
.......
T Consensus 164 ~~~~~~~------------------------------------------------------------------------- 170 (286)
T cd06614 164 AQLTKEK------------------------------------------------------------------------- 170 (286)
T ss_pred hhhccch-------------------------------------------------------------------------
Confidence 5433100
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCC---CcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRF---DSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f---~~~~ 533 (1092)
.......++..|+|||.+.+..++.++|+|||||+||+|+++. ....
T Consensus 171 ------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~ 220 (286)
T cd06614 171 ------------------------------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREP 220 (286)
T ss_pred ------------------------------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence 0001335678899999999888999999999999999999863 2222
Q ss_pred HHHHHHHhccccCCCC--CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 534 ALAAAMSDLRDRILPP--SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~--~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
......... ....++ .....+..+.+|+.+||+++|.+||++.++|+|+||..
T Consensus 221 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 221 PLRALFLIT-TKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred HHHHHHHHH-hcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence 222222111 112221 11224677899999999999999999999999999987
No 317
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.94 E-value=1.1e-26 Score=259.33 Aligned_cols=243 Identities=16% Similarity=0.145 Sum_probs=175.8
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+|.|.||+|.... .+..++.|+..............++...+....|||++.++.....+...+
T Consensus 15 G~~~~vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~------------ 78 (277)
T cd06641 15 GSFGEVFKGIDNR----TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLW------------ 78 (277)
T ss_pred cCCeEEEEEEECC----CCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEE------------
Confidence 4679999996521 134455554422222222223334556677889999998766544333222
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
++|||+.|++|.+++... .++...++.++.|++.+|.|||++||+|+||||+||+++.++.++++|||+++.+.
T Consensus 79 ----lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06641 79 ----IIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 152 (277)
T ss_pred ----EEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecc
Confidence 489999999999999754 57788899999999999999999999999999999999999999999999876543
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
...
T Consensus 153 ~~~----------------------------------------------------------------------------- 155 (277)
T cd06641 153 DTQ----------------------------------------------------------------------------- 155 (277)
T ss_pred cch-----------------------------------------------------------------------------
Confidence 100
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcHH--HHHHH
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSER--ALAAA 538 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~~--~~~~~ 538 (1092)
.......|+.+|+|||.+.+..++.++|+|||||++|+|+++..+.. .....
T Consensus 156 --------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~ 209 (277)
T cd06641 156 --------------------------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKV 209 (277)
T ss_pred --------------------------hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHH
Confidence 00013457888999999988888999999999999999999733321 11111
Q ss_pred HHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 539 MSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 539 ~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
...+.....+......++.+.+|+.+||+.+|.+||++.++++||||...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 210 LFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred HHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 11222222222233456788999999999999999999999999999774
No 318
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.94 E-value=1.4e-26 Score=267.11 Aligned_cols=253 Identities=15% Similarity=0.133 Sum_probs=171.0
Q ss_pred hHHHhhhcc--ccceeeeCCCCC--ccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLN--AFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 287 (1092)
.|.+.+.++ |.|+||++.... .... +..++.|+..............++...+... .|||++.++.........
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTAT-CRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCcccc-ceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 455555554 789999997421 1111 3445555543222222233444566666666 689988766543321110
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC--------------------------------------------
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-------------------------------------------- 323 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-------------------------------------------- 323 (1092)
...+||||+||+|.++|....
T Consensus 87 ---------------~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (343)
T cd05103 87 ---------------LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSG 151 (343)
T ss_pred ---------------eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhcccccccccccccc
Confidence 113799999999999996532
Q ss_pred ----------------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccccc
Q 001366 324 ----------------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (1092)
Q Consensus 324 ----------------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~ 381 (1092)
..++...++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~ 231 (343)
T cd05103 152 FVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 231 (343)
T ss_pred ccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEeccccccccc
Confidence 1245667788999999999999999999999999999999999999999998876431
Q ss_pred cccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccc
Q 001366 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (1092)
Q Consensus 382 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 461 (1092)
....
T Consensus 232 ~~~~---------------------------------------------------------------------------- 235 (343)
T cd05103 232 DPDY---------------------------------------------------------------------------- 235 (343)
T ss_pred Ccch----------------------------------------------------------------------------
Confidence 0000
Q ss_pred cccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHHHH
Q 001366 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAA 537 (1092)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~~~ 537 (1092)
.......++..|+|||.+.+..++.++|||||||++|||++ + |........
T Consensus 236 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 290 (343)
T cd05103 236 -------------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 290 (343)
T ss_pred -------------------------hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH
Confidence 00001234566999999998899999999999999999986 4 332221122
Q ss_pred HHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 538 AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 538 ~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
....+.....++.....++++.+++.+||+++|.+||++.+|++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 291 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 222232222222223346889999999999999999999999986
No 319
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.94 E-value=8.5e-27 Score=264.03 Aligned_cols=247 Identities=15% Similarity=0.093 Sum_probs=167.6
Q ss_pred chhHHHhhhc--cccceeeeCCCCCcccccccc--ccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCC
Q 001366 211 FSEFFVKTTL--KGKGIVCRGPPLNAFKERRGM--IDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNG 285 (1092)
Q Consensus 211 f~~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 285 (1092)
|..|.+...+ +|.|+||++...+. +.. ++.+.+.............++...+... .|||++.+......+.
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~----~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~ 81 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKD----GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 81 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccC----CceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC
Confidence 4445555444 46899999975321 111 2222221111111112223344455555 8999998776654433
Q ss_pred CCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCc
Q 001366 286 SLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRIECLYIFRQIVALVDYHHTQGV 350 (1092)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~~~~~~~i~~qil~~l~~lHs~gI 350 (1092)
..+ .+|||++|++|.++|...+ ..++..+++.++.||+.||+|||++||
T Consensus 82 ~~~----------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi 145 (303)
T cd05088 82 YLY----------------LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF 145 (303)
T ss_pred Cce----------------EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 333 3899999999999996543 246778899999999999999999999
Q ss_pred cccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccc
Q 001366 351 TFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLF 430 (1092)
Q Consensus 351 vHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (1092)
+||||||+|||++.++.+|++|||+++......
T Consensus 146 ~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~----------------------------------------------- 178 (303)
T cd05088 146 IHRDLAARNILVGENYVAKIADFGLSRGQEVYV----------------------------------------------- 178 (303)
T ss_pred cccccchheEEecCCCcEEeCccccCcccchhh-----------------------------------------------
Confidence 999999999999999999999999875321000
Q ss_pred cCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCC
Q 001366 431 PSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCT 510 (1092)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t 510 (1092)
. -....++..|+|||.+.+..++
T Consensus 179 -------------------------------------------------------~--~~~~~~~~~y~aPE~~~~~~~~ 201 (303)
T cd05088 179 -------------------------------------------------------K--KTMGRLPVRWMAIESLNYSVYT 201 (303)
T ss_pred -------------------------------------------------------h--cccCCCcccccCHHHHhccCCc
Confidence 0 0011234569999999888899
Q ss_pred ccccchhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 511 TSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 511 ~~sDIwSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
.++|||||||+||||++ + |...... .....+.....++.....++.+.+|+.+||+.+|++||++.++|++
T Consensus 202 ~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 202 TNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred ccccchhhhhHHHHHHhcCCCCcccCChH-HHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999996 4 3222211 1222222222222233456888999999999999999999999986
No 320
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.94 E-value=1.7e-26 Score=259.42 Aligned_cols=243 Identities=17% Similarity=0.101 Sum_probs=169.0
Q ss_pred ccccceeeeCCCCCcccc-ccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKE-RRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.+|.|.||++...+.... .+..++.|.....+ .........+...+....||+++.+......+...+
T Consensus 15 ~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~---------- 83 (288)
T cd05093 15 EGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI---------- 83 (288)
T ss_pred CcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE----------
Confidence 346899999875332221 11223333332111 112223344556777889999998766544332222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcC------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARG------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
.+|||+.|++|.++|...+ ..+++..++.++.||+.||+|||++||+||||||+||+++.++
T Consensus 84 ------lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~ 157 (288)
T cd05093 84 ------MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL 157 (288)
T ss_pred ------EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence 3899999999999997543 2477889999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+|++|||+++........
T Consensus 158 ~~kl~dfg~~~~~~~~~~~------------------------------------------------------------- 176 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYY------------------------------------------------------------- 176 (288)
T ss_pred cEEeccCCccccccCCcee-------------------------------------------------------------
Confidence 9999999988754310000
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
.......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 177 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~ 216 (288)
T cd05093 177 ----------------------------------------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIF 216 (288)
T ss_pred ----------------------------------------ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHH
Confidence 0000223567799999999888999999999999999999
Q ss_pred C-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 527 G-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 527 ~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
+ + |........... +.....++.....++.+.+|+.+||+++|.+|||+.+++.
T Consensus 217 t~g~~p~~~~~~~~~~~~-i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 217 TYGKQPWYQLSNNEVIEC-ITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred hCCCCCCCCCCHHHHHHH-HHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 7 5 322222222222 2222233333345788999999999999999999999965
No 321
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.94 E-value=2e-26 Score=253.62 Aligned_cols=246 Identities=13% Similarity=0.043 Sum_probs=172.3
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..+|.|+||+|...+. ......++.|.............-.++...+...+|||++.++..... ...
T Consensus 4 g~g~~~~v~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~----------- 70 (257)
T cd05040 4 GDGSFGVVRRGEWSTS-GGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPL----------- 70 (257)
T ss_pred CccCcccEEeeeEecC-CCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeE-----------
Confidence 3478899999986431 110112344444332222233445566677888899999986655332 111
Q ss_pred cccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
..+|||+++++|.+++.... ..++...+..++.||+.||+|||++||+||||||+||+++.++.+|++|||+++
T Consensus 71 -----~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~ 145 (257)
T cd05040 71 -----MMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMR 145 (257)
T ss_pred -----EEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccc
Confidence 13799999999999997754 467888999999999999999999999999999999999999999999999987
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+......
T Consensus 146 ~~~~~~~~------------------------------------------------------------------------ 153 (257)
T cd05040 146 ALPQNEDH------------------------------------------------------------------------ 153 (257)
T ss_pred cccccccc------------------------------------------------------------------------
Confidence 65410000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-CCCc---HH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDS---ER 533 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~f~~---~~ 533 (1092)
| .......++..|+|||.+.+..++.++|||||||++|||++ +..+ ..
T Consensus 154 ------------~----------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 205 (257)
T cd05040 154 ------------Y----------------VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS 205 (257)
T ss_pred ------------e----------------ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC
Confidence 0 00002235667999999998889999999999999999997 5322 22
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
..............++.....++.+.+++.+||..+|++||++.++++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 254 (257)
T cd05040 206 GSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREF 254 (257)
T ss_pred HHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHH
Confidence 2222111111222222233456788999999999999999999999863
No 322
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.94 E-value=1.2e-26 Score=263.03 Aligned_cols=259 Identities=15% Similarity=0.120 Sum_probs=175.9
Q ss_pred cccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
++.|.||++.... .+..++.|....... ........++..++...+|||++.++.....+...+
T Consensus 12 g~~~~v~~~~~~~----~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~---------- 77 (305)
T cd05609 12 GAYGAVYLVRHKE----TRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLC---------- 77 (305)
T ss_pred CCCeeEEEEEECC----CCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEE----------
Confidence 4678899887532 234444443322111 111223334556777889999998765544333222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
++|||++|++|.++|+..+ .+++..+..++.|++.||.|||++||+||||||+||+++.++.+|++|||+++.
T Consensus 78 ------lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~ 150 (305)
T cd05609 78 ------MVMEYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKI 150 (305)
T ss_pred ------EEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccc
Confidence 3899999999999997765 467778999999999999999999999999999999999999999999998874
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
...+... +... ..
T Consensus 151 ~~~~~~~------------~~~~-----------------------------------------------~~-------- 163 (305)
T cd05609 151 GLMSLTT------------NLYE-----------------------------------------------GH-------- 163 (305)
T ss_pred cCcCccc------------cccc-----------------------------------------------cc--------
Confidence 2210000 0000 00
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
... ...........|+..|+|||.+.+..++.++|||||||+||||+++ |.+....
T Consensus 164 -------------------~~~--~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~ 222 (305)
T cd05609 164 -------------------IEK--DTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE 222 (305)
T ss_pred -------------------ccc--chhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 000 0000011134678889999999988899999999999999999986 4333222
Q ss_pred HHHHHhcc-cc-CCCCCCCCCChhHHHHHHhccccCCCCCCC---HHHHhhhhhhhhhh
Q 001366 536 AAAMSDLR-DR-ILPPSFLSENPKEAGFCLWQLHPEPLSRPT---TREILQSEVTNEFQ 589 (1092)
Q Consensus 536 ~~~~~~~~-~~-~~p~~~~~~~~~~~~li~~lL~~dP~~Rps---a~eiL~~~~~~~~~ 589 (1092)
....... .. ..|......++.+.+|+.+||+++|.+||+ +.++|+||||....
T Consensus 223 -~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~ 280 (305)
T cd05609 223 -ELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLD 280 (305)
T ss_pred -HHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCC
Confidence 2222222 21 222222345778899999999999999998 79999999997643
No 323
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.94 E-value=1.1e-26 Score=256.52 Aligned_cols=240 Identities=19% Similarity=0.182 Sum_probs=170.9
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchh-hH--hhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-AA--LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
.++.|.||++...+ .+..++.|+......... .. .......+.....|||++.++.....+...+
T Consensus 6 ~g~~~~v~~a~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~-------- 73 (260)
T cd05611 6 KGAFGSVYLAKKRS----TGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLY-------- 73 (260)
T ss_pred cCCCeeEEEEEecC----CCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEE--------
Confidence 46789999997632 244555555432221111 11 1122222344558899887765544332222
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
.+|||+.|++|.++++..+ .++...+..++.||+.||.|||++||+||||+|+||+++.++.+|++|||++
T Consensus 74 --------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 144 (260)
T cd05611 74 --------LVMEYLNGGDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLS 144 (260)
T ss_pred --------EEEeccCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccc
Confidence 3799999999999997654 4677799999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+....
T Consensus 145 ~~~~~--------------------------------------------------------------------------- 149 (260)
T cd05611 145 RNGLE--------------------------------------------------------------------------- 149 (260)
T ss_pred eeccc---------------------------------------------------------------------------
Confidence 54220
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
.....|+..|+|||.+.+..++.++|||||||+||||+++ |....
T Consensus 150 --------------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 197 (260)
T cd05611 150 --------------------------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET 197 (260)
T ss_pred --------------------------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC
Confidence 0023467779999999988899999999999999999986 43322
Q ss_pred HHHHHHHhccc-c-CCCC-CCCCCChhHHHHHHhccccCCCCCCCH---HHHhhhhhhhhh
Q 001366 534 ALAAAMSDLRD-R-ILPP-SFLSENPKEAGFCLWQLHPEPLSRPTT---REILQSEVTNEF 588 (1092)
Q Consensus 534 ~~~~~~~~~~~-~-~~p~-~~~~~~~~~~~li~~lL~~dP~~Rpsa---~eiL~~~~~~~~ 588 (1092)
... ....+.. . ..++ .....++.+.+|+.+||..+|++||++ .|+|.||||...
T Consensus 198 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 198 PDA-VFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred HHH-HHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 222 1111111 1 1222 222457889999999999999999955 799999999753
No 324
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=1.2e-26 Score=260.08 Aligned_cols=251 Identities=17% Similarity=0.127 Sum_probs=178.5
Q ss_pred hhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 212 ~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
..|.+.+.++ +.|.||++...+ .+..++.|+...............+..++...+|||++..+.........+
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~----~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~- 79 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIP----TGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNIC- 79 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcC----CCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEE-
Confidence 3455555554 689999988632 133444444322222222233345566677889999998776655433222
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhh-cCccccCCCCCCeEEccCCcE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs-~gIvHrDLKP~Nill~~~~~v 368 (1092)
.+|||+.|++|.+++...+ .++...+..++.|++.+|.|||+ +||+||||||+||+++.++.+
T Consensus 80 ---------------lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~ 143 (284)
T cd06620 80 ---------------MCMEFMDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQI 143 (284)
T ss_pred ---------------EEEecCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcE
Confidence 3899999999999997654 46777899999999999999997 699999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
+++|||++.......
T Consensus 144 ~l~d~gl~~~~~~~~----------------------------------------------------------------- 158 (284)
T cd06620 144 KLCDFGVSGELINSI----------------------------------------------------------------- 158 (284)
T ss_pred EEccCCcccchhhhc-----------------------------------------------------------------
Confidence 999999875432000
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~ 528 (1092)
....+|+..|+|||.+.+..++.++|||||||++|||+++
T Consensus 159 ----------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg 198 (284)
T cd06620 159 ----------------------------------------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALG 198 (284)
T ss_pred ----------------------------------------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhC
Confidence 0024578889999999888899999999999999999986
Q ss_pred ---CCcHHH----------HHHHHHhccccCCCCCC-CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 529 ---FDSERA----------LAAAMSDLRDRILPPSF-LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 529 ---f~~~~~----------~~~~~~~~~~~~~p~~~-~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|..... .............+... ...++++.+|+.+||.+||.+||++.|+++|+||...
T Consensus 199 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 199 KFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred CCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 332211 11112222211112111 1245778899999999999999999999999998654
No 325
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.94 E-value=1.8e-26 Score=254.46 Aligned_cols=243 Identities=15% Similarity=0.073 Sum_probs=169.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|.||+|.....-. ....++.|+..............++...+....||+++.+......+.
T Consensus 5 ~G~~g~v~~~~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-------------- 69 (257)
T cd05060 5 HGNFGSVVKGVYLMKSG-KEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEP-------------- 69 (257)
T ss_pred ccCceeEEEeEeeccCC-CcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCc--------------
Confidence 46789999986522110 113344444433333223334445566777789999988654322111
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
...+|+|+.|++|.++|.... .+++..++.++.||+.+|+|||.+||+||||||+||+++.++.+|++|||+++.+
T Consensus 70 ---~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~ 145 (257)
T cd05060 70 ---LMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRAL 145 (257)
T ss_pred ---eEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEecccccccee
Confidence 113899999999999997765 5777799999999999999999999999999999999999999999999988764
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
......
T Consensus 146 ~~~~~~-------------------------------------------------------------------------- 151 (257)
T cd05060 146 GAGSDY-------------------------------------------------------------------------- 151 (257)
T ss_pred ecCCcc--------------------------------------------------------------------------
Confidence 310000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-CCCcHH--HHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDSER--ALA 536 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~f~~~~--~~~ 536 (1092)
........++..|+|||.+.+..++.++|||||||++|||++ +..+.. ...
T Consensus 152 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~ 205 (257)
T cd05060 152 --------------------------YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA 205 (257)
T ss_pred --------------------------cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH
Confidence 000001123456999999998889999999999999999997 533211 111
Q ss_pred HHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 537 AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 537 ~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
.....+......+.....++.+.+|+.+||.++|.+||++.++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 206 EVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred HHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 222223222223334455788999999999999999999999986
No 326
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.94 E-value=1.7e-24 Score=248.58 Aligned_cols=310 Identities=17% Similarity=0.248 Sum_probs=235.7
Q ss_pred EeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCC
Q 001366 749 GAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR 828 (1092)
Q Consensus 749 ~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~ 828 (1092)
-++.||.+++|+...-+.. -.+.+|...|+++.|+..|..||+||.|+.|.+||+-.. .-.....+|+
T Consensus 82 VGYaDGsVqif~~~s~~~~-----~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E-------~Gl~rL~GHk 149 (888)
T KOG0306|consen 82 VGYADGSVQIFSLESEEIL-----ITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGE-------EGLFRLRGHK 149 (888)
T ss_pred EEecCceEEeeccCCCcee-----eeecccccceEEEEEcccCceEeecCCCccEEEEEeccc-------eeeEEeecch
Confidence 5689999999997654222 246799999999999999999999999999999998641 1223456899
Q ss_pred CCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCC-----
Q 001366 829 SKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE----- 903 (1092)
Q Consensus 829 ~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~----- 903 (1092)
..|+..-|... .++|+|+|.|+.|++||+.+..|+.+...|...||++++.+ +.+++++.|+.+++|++..
T Consensus 150 d~iT~~~F~~~-~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~---~~lvt~~~dse~~v~~L~~~~D~~ 225 (888)
T KOG0306|consen 150 DSITQALFLNG-DSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDE---KLLVTAGTDSELKVWELAFEDDEK 225 (888)
T ss_pred HHHhHHhccCC-CeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEec---ceEEEEecCCceEEEEeecccccc
Confidence 99999888875 78999999999999999999999999999999999999976 7899999999999999810
Q ss_pred --------------------------------------------------------------------------------
Q 001366 904 -------------------------------------------------------------------------------- 903 (1092)
Q Consensus 904 -------------------------------------------------------------------------------- 903 (1092)
T Consensus 226 ~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~ 305 (888)
T KOG0306|consen 226 ETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEK 305 (888)
T ss_pred cccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhh
Confidence
Q ss_pred ---------------------------Cce----------------------------eeeE---ecCCceEEEEEccCC
Q 001366 904 ---------------------------KNS----------------------------LATI---KNIANVCCVQFSAHS 925 (1092)
Q Consensus 904 ---------------------------~~~----------------------------l~~l---~~~~~V~sl~fsp~~ 925 (1092)
+.. +..+ .|...|.+++++.+.
T Consensus 306 sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~ 385 (888)
T KOG0306|consen 306 SLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDS 385 (888)
T ss_pred hHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCc
Confidence 000 0000 022345666666554
Q ss_pred CeEEEEEECCCeEEEEEcCCCCc---------------------------------------ceEEecCCCCCeEEEEEc
Q 001366 926 SHLLAFGSADYRTYCYDLRNARA---------------------------------------PWCVLAGHEKAVSYVKFL 966 (1092)
Q Consensus 926 ~~~latgs~Dg~I~vwDlr~~~~---------------------------------------~~~~l~~H~~~V~~v~fs 966 (1092)
.++..+..+.+++|+..+.+. .+.+..+|.+.|++++.+
T Consensus 386 --~~~~Sga~~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~ 463 (888)
T KOG0306|consen 386 --ILLASGAGESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLS 463 (888)
T ss_pred --eeeeecCCCcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeec
Confidence 344444566777777764432 122346799999999998
Q ss_pred -CCCEEEEEECCCeEEEEEcCCCCCCCCCCCcee-----EEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCc
Q 001366 967 -DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACS-----LTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMP 1040 (1092)
Q Consensus 967 -~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~-----~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~ 1040 (1092)
++..++|||.|.+|++||..--........+.+ +++ .-+..|.|+++||||++||.+=-|++|+||.+.+-+.
T Consensus 464 pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtL-el~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKF 542 (888)
T KOG0306|consen 464 PDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTL-ELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKF 542 (888)
T ss_pred CCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEE-eccccEEEEEEcCCCcEEEEEeccCeEEEEEecceee
Confidence 677899999999999999863211110111111 112 2356799999999999999999999999998765432
Q ss_pred eeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1041 ITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1041 i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.. .+-||.-+|.+|..+||+++++|||.|..|+||=+
T Consensus 543 fl--------------sLYGHkLPV~smDIS~DSklivTgSADKnVKiWGL 579 (888)
T KOG0306|consen 543 FL--------------SLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGL 579 (888)
T ss_pred ee--------------eecccccceeEEeccCCcCeEEeccCCCceEEecc
Confidence 22 23578899999999999999999999999999954
No 327
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.94 E-value=8.2e-27 Score=258.73 Aligned_cols=245 Identities=15% Similarity=0.125 Sum_probs=169.9
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
++.|.||++.... .++.++.|++..... .......+..++... .|+|++.+++......... ....
T Consensus 17 g~~~~v~~~~~~~----~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~---~~~~---- 83 (275)
T cd06608 17 GTYGKVYKARHKK----TGQLVAIKIMDIIED--EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG---NDDQ---- 83 (275)
T ss_pred CCCeEEEEEEECC----CCcEEEEEEEecCch--hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC---cceE----
Confidence 4678999988632 234455555432221 122233344445555 7999998776655433210 0001
Q ss_pred ccCCCcccccCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~---~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
..++|+|++|++|.+++... +..++...+..++.||+.||.|||++||+|+||+|+||+++.++.+|++|||++
T Consensus 84 ---~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 84 ---LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ---EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 12489999999999998653 356788899999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
.......
T Consensus 161 ~~~~~~~------------------------------------------------------------------------- 167 (275)
T cd06608 161 AQLDSTL------------------------------------------------------------------------- 167 (275)
T ss_pred eecccch-------------------------------------------------------------------------
Confidence 6533100
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-----CCCCccccchhhhHHHHHHcCC---
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----GVCTTSSNIYSLGVLFFELFGR--- 528 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----~~~t~~sDIwSLGvll~ell~~--- 528 (1092)
.......|+..|+|||.+.. ..++.++|||||||+||+|+++
T Consensus 168 ------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p 217 (275)
T cd06608 168 ------------------------------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPP 217 (275)
T ss_pred ------------------------------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCC
Confidence 00013457888999998854 3478899999999999999986
Q ss_pred CCcHHHHHHHHHhccccCCCCC--CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 529 FDSERALAAAMSDLRDRILPPS--FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 529 f~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
|............... ..+.. ....+..+.+|+.+||.+||.+|||+.++++|||+
T Consensus 218 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 218 LCDMHPMRALFKIPRN-PPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred ccccchHHHHHHhhcc-CCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 4332222233332222 11111 11245678899999999999999999999999996
No 328
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.94 E-value=1.8e-26 Score=256.52 Aligned_cols=244 Identities=18% Similarity=0.171 Sum_probs=170.7
Q ss_pred ccccceeeeCCCCCccccccccccccccc-cccCchh--------hHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFV-TTTMPSD--------AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.+|.|.||+|...+ .+..++.|.+. ....... ...-.++...+....|||++.++.........
T Consensus 11 ~g~~~~vy~~~~~~----~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~--- 83 (272)
T cd06629 11 KGTYGRVYLALNVT----TGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYL--- 83 (272)
T ss_pred ccCceEEEEEeecC----CCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCce---
Confidence 34789999997632 24445554331 1111000 11123355667788899998765543322222
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
..+|||+.|++|.+++...+ .++...++.++.||+.||.|||++|++||||||+||+++.++.+++
T Consensus 84 -------------~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l 149 (272)
T cd06629 84 -------------SIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKI 149 (272)
T ss_pred -------------EEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEE
Confidence 23799999999999997764 5677789999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++.......
T Consensus 150 ~d~~~~~~~~~~~~------------------------------------------------------------------ 163 (272)
T cd06629 150 SDFGISKKSDDIYD------------------------------------------------------------------ 163 (272)
T ss_pred eecccccccccccc------------------------------------------------------------------
Confidence 99998765321000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC--CCccccchhhhHHHHHHcCC
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV--CTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~--~t~~sDIwSLGvll~ell~~ 528 (1092)
........|+..|+|||.+.... ++.++|+|||||++|||+++
T Consensus 164 -----------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g 208 (272)
T cd06629 164 -----------------------------------NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAG 208 (272)
T ss_pred -----------------------------------ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhC
Confidence 00001345778899999988754 78999999999999999997
Q ss_pred CCc---HHHHHHHHHhcc---ccCCCCC-CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 529 FDS---ERALAAAMSDLR---DRILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 529 f~~---~~~~~~~~~~~~---~~~~p~~-~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
..+ ............ ...+++. ....+..+.+|+.+||.++|..||++.++|+||||
T Consensus 209 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 209 RRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred CCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 332 222222222111 1122222 23446788999999999999999999999999996
No 329
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.94 E-value=1e-26 Score=257.45 Aligned_cols=239 Identities=17% Similarity=0.168 Sum_probs=171.5
Q ss_pred cccceeeeCCCCCcccccccccccccccccc-Cch-hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
++.|.||+|... ..+..++.|...... ... .......+..++...+|||++.+.+........+
T Consensus 13 g~~~~v~~~~~~----~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~---------- 78 (267)
T cd08228 13 GQFSEVYRATCL----LDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELN---------- 78 (267)
T ss_pred CCCeeEEEEEEe----CCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEE----------
Confidence 357999999752 224555555332211 111 2223345667788889999998766544322222
Q ss_pred cccCCCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
.+++|++|++|.+++.. ....++...++.++.||+.||+|||++||+|+||||+||+++.++.++++|||+
T Consensus 79 ------~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~ 152 (267)
T cd08228 79 ------IVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL 152 (267)
T ss_pred ------EEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECcccc
Confidence 37999999999999853 334577778999999999999999999999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++......
T Consensus 153 ~~~~~~~~------------------------------------------------------------------------ 160 (267)
T cd08228 153 GRFFSSKT------------------------------------------------------------------------ 160 (267)
T ss_pred ceeccchh------------------------------------------------------------------------
Confidence 76543100
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcH
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
.......|+..|+|||.+.+..++.++|||||||++|||+++ |...
T Consensus 161 -------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~ 209 (267)
T cd08228 161 -------------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred -------------------------------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccc
Confidence 000133577889999999988899999999999999999986 3221
Q ss_pred -HHHHHHHHhccccCCCCCCC-CCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 533 -RALAAAMSDLRDRILPPSFL-SENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 533 -~~~~~~~~~~~~~~~p~~~~-~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
.........+.....|+... ..+..+.+|+.+||+.+|++||++.++++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 210 KMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred cccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 12223333333333444332 345778999999999999999999999874
No 330
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.94 E-value=1.1e-26 Score=259.59 Aligned_cols=245 Identities=18% Similarity=0.146 Sum_probs=170.2
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhh-hhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAG-AMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.++.|.||++... ..+..++.|................+ ..+++...|||++.++.....+...+
T Consensus 11 ~g~~g~v~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~---------- 76 (283)
T cd06617 11 RGAYGVVDKMRHV----PTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVW---------- 76 (283)
T ss_pred ccCCeEEEEEEEc----CCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEE----------
Confidence 4578999998763 23556666544322111122222222 33466678999998766544332222
Q ss_pred cccCCCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhhc-CccccCCCCCCeEEccCCcEEEeccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lHs~-gIvHrDLKP~Nill~~~~~vkl~Dfg 374 (1092)
.+|||++ ++|.+++.. .+..+++..++.++.||+.||+|||++ +++||||||+||+++.++.+|++|||
T Consensus 77 ------lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg 149 (283)
T cd06617 77 ------ICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFG 149 (283)
T ss_pred ------EEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecc
Confidence 2688887 688888754 234678889999999999999999997 99999999999999999999999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++.+....
T Consensus 150 ~~~~~~~~~----------------------------------------------------------------------- 158 (283)
T cd06617 150 ISGYLVDSV----------------------------------------------------------------------- 158 (283)
T ss_pred ccccccccc-----------------------------------------------------------------------
Confidence 876543100
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC----CCCCccccchhhhHHHHHHcCCCC
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG----GVCTTSSNIYSLGVLFFELFGRFD 530 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~----~~~t~~sDIwSLGvll~ell~~f~ 530 (1092)
..+...|+..|+|||.+.+ ..++.++|+|||||+||||+++..
T Consensus 159 ---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 205 (283)
T cd06617 159 ---------------------------------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRF 205 (283)
T ss_pred ---------------------------------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCC
Confidence 0012357788999998865 446899999999999999998632
Q ss_pred cH---HHHHHHHHhccccCCCCC-CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 531 SE---RALAAAMSDLRDRILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 531 ~~---~~~~~~~~~~~~~~~p~~-~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
+. ......+........+.. ....++.+.+|+.+||..+|.+||++.++++||||....
T Consensus 206 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 206 PYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred CCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 22 111122222222222211 123467889999999999999999999999999998753
No 331
>PTZ00421 coronin; Provisional
Probab=99.94 E-value=2.7e-24 Score=255.79 Aligned_cols=257 Identities=15% Similarity=0.188 Sum_probs=197.0
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCC-------CCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCc
Q 001366 780 NVICSISFDRDEDHFAAAGVSKKIKIFEFNALFN-------DSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV 852 (1092)
Q Consensus 780 ~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~-------~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dgt 852 (1092)
..|+....++++..+++++.+..+..|+...... .... ..+....+|.+.|.+++|+|.++++|++|+.|++
T Consensus 21 ~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~-~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dgt 99 (493)
T PTZ00421 21 LNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLA-SNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGT 99 (493)
T ss_pred eccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCC-CCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCE
Confidence 3455555666766677777777777777543110 0001 1123456899999999999954789999999999
Q ss_pred EEEEECCCC-------ceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccC
Q 001366 853 VKLWDACTG-------QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAH 924 (1092)
Q Consensus 853 V~IWD~~tg-------~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~ 924 (1092)
|+|||+.++ ..+..+.+|...|.+++|+|..+++|++|+.|++|+|||+++++.+..+. |...|.+++|+|+
T Consensus 100 IkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spd 179 (493)
T PTZ00421 100 IMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLD 179 (493)
T ss_pred EEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECC
Confidence 999999765 35678899999999999999556799999999999999999999888887 6778999999999
Q ss_pred CCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCe-EEEEEc-CCCEEEEEE----CCCeEEEEEcCCCCCCCCCCCce
Q 001366 925 SSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAV-SYVKFL-DSGTLVTAS----TDNKLKLWDLKRTSHTGPSTNAC 998 (1092)
Q Consensus 925 ~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V-~~v~fs-~~~~L~Sgs----~Dg~I~vWDl~~~~~~~~~~~~~ 998 (1092)
+. +|++|+.|+.|++||+++++ .+..+.+|.+.+ ..+.|. +++.+++++ .|+.|++||+++.. .+
T Consensus 180 G~-lLatgs~Dg~IrIwD~rsg~-~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~-------~p 250 (493)
T PTZ00421 180 GS-LLCTTSKDKKLNIIDPRDGT-IVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA-------SP 250 (493)
T ss_pred CC-EEEEecCCCEEEEEECCCCc-EEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC-------Cc
Confidence 85 89999999999999999876 456778887653 456676 556666654 47999999998532 23
Q ss_pred eEEEcC-CCCCeEEEEEecCCCEEEEEe-cCCcEEEEeCCCCCceeeeec
Q 001366 999 SLTFSG-HTNEKNFVGLSTADGYIACGS-ESNEVYAYHRSLPMPITSYKF 1046 (1092)
Q Consensus 999 ~~~l~~-h~~~V~~v~~spdg~~lasgs-~Dg~I~Iwd~~~~~~i~~~~~ 1046 (1092)
+..... +...+....|++++.+|++|+ .|+.|++|++..+.++....+
T Consensus 251 ~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~ 300 (493)
T PTZ00421 251 YSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSY 300 (493)
T ss_pred eeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeec
Confidence 333332 334556678999999988877 599999999998887776554
No 332
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.94 E-value=2.1e-26 Score=254.22 Aligned_cols=243 Identities=15% Similarity=0.118 Sum_probs=174.6
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
+|.+.+.++ |.|.||+|...+ +..++.|+...... ........+...++..+|||++.+..........+
T Consensus 7 ~y~~~~~ig~g~~~~vy~~~~~~-----~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~-- 78 (261)
T cd05148 7 EFTLERKLGSGYFGEVWEGLWKN-----RVRVAIKILKSDDL-LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVY-- 78 (261)
T ss_pred HHHHhhhhccCCCccEEEeEecC-----CCcEEEEeccccch-hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeE--
Confidence 466555554 689999998855 34455555433222 11223344556677889999987655433222211
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
++|||++|++|.+++.. .+..++...++.++.||+.||.|||++||+||||||+||+++.++.+|
T Consensus 79 --------------lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~k 144 (261)
T cd05148 79 --------------IITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCK 144 (261)
T ss_pred --------------EEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEE
Confidence 38999999999999965 344578888999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
++|||++........
T Consensus 145 l~d~g~~~~~~~~~~----------------------------------------------------------------- 159 (261)
T cd05148 145 VADFGLARLIKEDVY----------------------------------------------------------------- 159 (261)
T ss_pred EccccchhhcCCccc-----------------------------------------------------------------
Confidence 999998865431000
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~ 528 (1092)
......++..|+|||.+.+..++.++|||||||++|+|++ +
T Consensus 160 --------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g 201 (261)
T cd05148 160 --------------------------------------LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYG 201 (261)
T ss_pred --------------------------------------cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCC
Confidence 0001223556999999988889999999999999999997 3
Q ss_pred ---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
|....... ....+.....++.....++.+.+++.+||..+|.+|||+.+|++
T Consensus 202 ~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 202 QVPYPGMNNHE-VYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred CCCCCcCCHHH-HHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 43322222 22222222233444566788999999999999999999999986
No 333
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.94 E-value=8.8e-27 Score=281.61 Aligned_cols=210 Identities=12% Similarity=0.081 Sum_probs=150.0
Q ss_pred hhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC----CCCCHHHHHHHH
Q 001366 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG----HKGKRIECLYIF 335 (1092)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~----~~~~~~~~~~i~ 335 (1092)
.++..++...+||||+.+++........+ .+|+++ +++|.+++.... ......+++.|+
T Consensus 211 ~~Ei~il~~l~HpnIv~l~~~~~~~~~~~----------------lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~ 273 (501)
T PHA03210 211 ENEILALGRLNHENILKIEEILRSEANTY----------------MITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIM 273 (501)
T ss_pred HHHHHHHHhCCCCCcCcEeEEEEECCeeE----------------EEEecc-ccCHHHHHhhccccccccccHHHHHHHH
Confidence 45566788889999998877655433333 256666 457777774432 123345788999
Q ss_pred HHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhc
Q 001366 336 RQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQ 415 (1092)
Q Consensus 336 ~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 415 (1092)
.||+.||+|||++||+||||||+||||+.++.+||+|||+++.+.....
T Consensus 274 ~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~------------------------------- 322 (501)
T PHA03210 274 KQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKERE------------------------------- 322 (501)
T ss_pred HHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccc-------------------------------
Confidence 9999999999999999999999999999999999999999876431000
Q ss_pred ccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCccccccccccccccccccc
Q 001366 416 KFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEE 495 (1092)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 495 (1092)
......+||
T Consensus 323 -----------------------------------------------------------------------~~~~~~~gt 331 (501)
T PHA03210 323 -----------------------------------------------------------------------AFDYGWVGT 331 (501)
T ss_pred -----------------------------------------------------------------------cccccccCC
Confidence 000135789
Q ss_pred ccccCcccccCCCCCccccchhhhHHHHHHcCC-CCc-----HHHHHHHHHhccc-----cCCCC---------------
Q 001366 496 KWYASPEELSGGVCTTSSNIYSLGVLFFELFGR-FDS-----ERALAAAMSDLRD-----RILPP--------------- 549 (1092)
Q Consensus 496 ~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~-f~~-----~~~~~~~~~~~~~-----~~~p~--------------- 549 (1092)
..|+|||++.+..++.++|||||||+||||+++ +.+ .....+....+.. ..+|.
T Consensus 332 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~ 411 (501)
T PHA03210 332 VATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEID 411 (501)
T ss_pred cCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcc
Confidence 999999999999999999999999999999974 111 1111111111110 00110
Q ss_pred --------C--CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 550 --------S--FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 550 --------~--~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
. .....+.+.+++.+||++||.+|||+.|+|.||||...
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 412 HAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred cCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence 0 01234567788999999999999999999999999764
No 334
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.94 E-value=6.7e-27 Score=261.74 Aligned_cols=241 Identities=16% Similarity=0.194 Sum_probs=171.2
Q ss_pred cccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
+|.|.||++...+ .+..++.|++..... .........+..++...+|||++.+......+...+
T Consensus 12 g~~~~vy~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~----------- 76 (286)
T cd07846 12 GSYGMVMKCKHKE----TGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLY----------- 76 (286)
T ss_pred CCCeEEEEEEECC----CCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEE-----------
Confidence 5789999988632 234455554422111 112233345566778889999998665543222222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+|||++|++|.+++.... .++..+++.++.||+.||+|||++||+|+||+|+||+++.++.++++|||+++.+
T Consensus 77 -----lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~ 150 (286)
T cd07846 77 -----LVFEFVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTL 150 (286)
T ss_pred -----EEEecCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeec
Confidence 3899999999998876543 4788899999999999999999999999999999999999999999999988654
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
....
T Consensus 151 ~~~~---------------------------------------------------------------------------- 154 (286)
T cd07846 151 AAPG---------------------------------------------------------------------------- 154 (286)
T ss_pred cCCc----------------------------------------------------------------------------
Confidence 3100
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
...+...++.+|+|||.+.+ ..++.++|||||||++|||+++ |......
T Consensus 155 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~ 207 (286)
T cd07846 155 ---------------------------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI 207 (286)
T ss_pred ---------------------------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH
Confidence 00113467889999999876 4578999999999999999986 4332221
Q ss_pred HHHHHhcc--------------------ccCCC---------CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 536 AAAMSDLR--------------------DRILP---------PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 536 ~~~~~~~~--------------------~~~~p---------~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
........ ....| ..++..++.+.+|+.+||+++|.+||++.+|++||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 208 DQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred HHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 11111000 00000 1123456778999999999999999999999999997
No 335
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.94 E-value=1.6e-26 Score=256.01 Aligned_cols=248 Identities=15% Similarity=0.143 Sum_probs=175.5
Q ss_pred hccccceeeeCCCCCcccccccccccccccc-ccCch----hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVT-TTMPS----DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGART 293 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (1092)
..++.|.||++.. ...+..++.|+..- ..... ......++.+.++..+|||++.+++........
T Consensus 9 g~g~~~~v~~~~~----~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~------ 78 (268)
T cd06630 9 GTGAFSSCYQARD----VKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHF------ 78 (268)
T ss_pred cCcCceEEEEEEE----cCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeE------
Confidence 3457899998864 22245555544421 11111 123345567788888999999876654322221
Q ss_pred CCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC-cEEEec
Q 001366 294 GVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN-QVKYIG 372 (1092)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~-~vkl~D 372 (1092)
..+|+|+.|++|.++|+..+ .+++..++.+++||+.||.|||++||+||||||+||+++..+ .+|++|
T Consensus 79 ----------~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~d 147 (268)
T cd06630 79 ----------NLFVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIAD 147 (268)
T ss_pred ----------EEEEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcc
Confidence 24899999999999997654 467778999999999999999999999999999999998775 599999
Q ss_pred ccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCC
Q 001366 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1092)
Q Consensus 373 fg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 452 (1092)
||+++........
T Consensus 148 fg~~~~~~~~~~~------------------------------------------------------------------- 160 (268)
T cd06630 148 FGAAARLAAKGTG------------------------------------------------------------------- 160 (268)
T ss_pred ccccccccccccc-------------------------------------------------------------------
Confidence 9988664411000
Q ss_pred CCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---C
Q 001366 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---F 529 (1092)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f 529 (1092)
.........|+..|+|||.+.+..++.++|||||||++|+|+++ |
T Consensus 161 --------------------------------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~ 208 (268)
T cd06630 161 --------------------------------AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPW 208 (268)
T ss_pred --------------------------------CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCC
Confidence 00000034578889999999988899999999999999999986 3
Q ss_pred CcHH--HHHHHHHhc-cccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001366 530 DSER--ALAAAMSDL-RDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1092)
Q Consensus 530 ~~~~--~~~~~~~~~-~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~ 586 (1092)
.... .....+... .....++.....++.+.+|+.+||.++|.+||++.++++||||.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 209 NAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred CCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 2111 112222222 12222333334578899999999999999999999999999984
No 336
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.94 E-value=1.7e-26 Score=259.51 Aligned_cols=244 Identities=16% Similarity=0.112 Sum_probs=169.6
Q ss_pred ccccceeeeCCCCCcccc-ccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKE-RRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.+|.|.||+|........ ....++.|+...............+...+....|||++..+.....+...+
T Consensus 10 ~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~---------- 79 (290)
T cd05045 10 EGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL---------- 79 (290)
T ss_pred CcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE----------
Confidence 457899999875321100 012344444433222222333445566778889999998766544333222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCC
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARG-----------------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDL 355 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~-----------------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDL 355 (1092)
.+|||+.|++|.++|.... ..++...++.++.||+.||.|||++||+||||
T Consensus 80 ------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~di 153 (290)
T cd05045 80 ------LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDL 153 (290)
T ss_pred ------EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhh
Confidence 3799999999999986421 23667788999999999999999999999999
Q ss_pred CCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccC
Q 001366 356 KPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYG 435 (1092)
Q Consensus 356 KP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1092)
||+||+++.++.+|++|||+++.+......
T Consensus 154 kp~nill~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------------------- 183 (290)
T cd05045 154 AARNVLVAEGRKMKISDFGLSRDVYEEDSY-------------------------------------------------- 183 (290)
T ss_pred hhheEEEcCCCcEEeccccccccccCccch--------------------------------------------------
Confidence 999999999999999999988764310000
Q ss_pred CcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccc
Q 001366 436 NKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNI 515 (1092)
Q Consensus 436 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDI 515 (1092)
.......++..|+|||.+.+..++.++||
T Consensus 184 ---------------------------------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di 212 (290)
T cd05045 184 ---------------------------------------------------VKRSKGRIPVKWMAIESLFDHIYTTQSDV 212 (290)
T ss_pred ---------------------------------------------------hcccCCCCCccccCHHHHccCCcchHhHH
Confidence 00001234556999999988889999999
Q ss_pred hhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 516 YSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 516 wSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
|||||++|||++ + |.+... ......+.....++.....++.+.+|+.+||+++|.+||++.+++.
T Consensus 213 ~slG~~l~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 213 WSFGVLLWEIVTLGGNPYPGIAP-ERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 999999999997 4 433222 2222222222223333455788999999999999999999999976
No 337
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.94 E-value=1.2e-26 Score=266.46 Aligned_cols=257 Identities=17% Similarity=0.225 Sum_probs=176.2
Q ss_pred ccccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.+|.|+||++.... .+..++.|...... .........++..++...+|||++.+.+........ ..-
T Consensus 15 ~g~~g~v~~~~~~~----~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-----~~~--- 82 (334)
T cd07855 15 SGAYGVVCSAIDTR----SGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGAD-----FKD--- 82 (334)
T ss_pred cCCCeEEEEEEEcC----CCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCC-----Cce---
Confidence 35789999997632 24455555443221 112223344566778888999999765532211100 000
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.-++|+|+. ++|.+++...+ .++..+++.++.||+.||.|||++||+||||||+||+++.++.+|++|||+++.
T Consensus 83 ----~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~ 156 (334)
T cd07855 83 ----VYVVMDLME-SDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARG 156 (334)
T ss_pred ----EEEEEehhh-hhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEeccccccee
Confidence 114788886 58999997654 478889999999999999999999999999999999999999999999998876
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
......
T Consensus 157 ~~~~~~-------------------------------------------------------------------------- 162 (334)
T cd07855 157 LSSSPT-------------------------------------------------------------------------- 162 (334)
T ss_pred ecccCc--------------------------------------------------------------------------
Confidence 431000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
.........+|+.+|+|||.+.+ ..++.++|||||||++|||+++ |.+...
T Consensus 163 -------------------------~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~ 217 (334)
T cd07855 163 -------------------------EHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY 217 (334)
T ss_pred -------------------------CCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCCh
Confidence 00001124578899999999866 5689999999999999999986 433221
Q ss_pred HHHHH--------------------------HhccccCC---CCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 535 LAAAM--------------------------SDLRDRIL---PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 535 ~~~~~--------------------------~~~~~~~~---p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
..... ........ ...+...++++.+|+.+||+.+|.+||++.+++.||||
T Consensus 218 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~ 297 (334)
T cd07855 218 VHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFL 297 (334)
T ss_pred HHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhh
Confidence 11110 00000000 00123457889999999999999999999999999999
Q ss_pred hhhhccch
Q 001366 586 NEFQEVCA 593 (1092)
Q Consensus 586 ~~~~~~~~ 593 (1092)
...+....
T Consensus 298 ~~~~~~~~ 305 (334)
T cd07855 298 AQYHDPDD 305 (334)
T ss_pred hhccCCcc
Confidence 87766554
No 338
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.94 E-value=1.8e-26 Score=254.78 Aligned_cols=235 Identities=17% Similarity=0.112 Sum_probs=168.3
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+|.|.||+|...+ +..++.|....... ....-..+..++...+|+|++.+..........+
T Consensus 17 g~~g~v~~~~~~~-----~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~------------ 77 (261)
T cd05072 17 GQFGEVWMGYYNN-----STKVAVKTLKPGTM--SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIY------------ 77 (261)
T ss_pred cCCceEEEEEecC-----CceEEEEEccCCch--hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE------------
Confidence 4789999998654 23344443322111 1223344556677889999998655533222222
Q ss_pred cCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+|+|+.|++|.++++.. +..++...++.++.||+.||+|||++|++||||||+||+++.++.+|++|||+++..
T Consensus 78 ----lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~ 153 (261)
T cd05072 78 ----IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVI 153 (261)
T ss_pred ----EEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceec
Confidence 379999999999999653 445777788999999999999999999999999999999999999999999988764
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
.+...
T Consensus 154 ~~~~~--------------------------------------------------------------------------- 158 (261)
T cd05072 154 EDNEY--------------------------------------------------------------------------- 158 (261)
T ss_pred CCCce---------------------------------------------------------------------------
Confidence 31000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~ 535 (1092)
.......++..|+|||.+.+..++.++|||||||++|||++ + |......
T Consensus 159 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~ 211 (261)
T cd05072 159 ---------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS 211 (261)
T ss_pred ---------------------------eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH
Confidence 00002234567999999998889999999999999999997 4 4332222
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
.....+.....++.....+.++.+|+.+||+++|++||++.++++
T Consensus 212 -~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 212 -DVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred -HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 222222322333444556778899999999999999999999875
No 339
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.94 E-value=1.6e-26 Score=262.07 Aligned_cols=252 Identities=16% Similarity=0.150 Sum_probs=171.8
Q ss_pred hHHHhhhc--cccceeeeCCCCCcc---ccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAF---KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 286 (1092)
.|.+.+.+ +|.|.||++...+.- +.....++.|++..............+..++... +||+++.+......+..
T Consensus 19 ~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 98 (307)
T cd05098 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP 98 (307)
T ss_pred HeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence 35554444 367999988642210 1112234455443322222222333344455555 79999987665443332
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCcc
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRIECLYIFRQIVALVDYHHTQGVT 351 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~~~~~~~i~~qil~~l~~lHs~gIv 351 (1092)
.+ ++|||+.+++|.++|.... ..++..+++.++.||+.||+|||++||+
T Consensus 99 ~~----------------lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~ 162 (307)
T cd05098 99 LY----------------VIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCI 162 (307)
T ss_pred eE----------------EEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 22 3899999999999997642 2466778999999999999999999999
Q ss_pred ccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCccccccccccc
Q 001366 352 FLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFP 431 (1092)
Q Consensus 352 HrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (1092)
||||||+||+++.++.+|++|||+++........
T Consensus 163 H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~---------------------------------------------- 196 (307)
T cd05098 163 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY---------------------------------------------- 196 (307)
T ss_pred cccccHHheEEcCCCcEEECCCcccccccccchh----------------------------------------------
Confidence 9999999999999999999999988654310000
Q ss_pred CccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCc
Q 001366 432 SKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTT 511 (1092)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~ 511 (1092)
...+...++..|+|||.+.+..++.
T Consensus 197 -------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~ 221 (307)
T cd05098 197 -------------------------------------------------------KKTTNGRLPVKWMAPEALFDRIYTH 221 (307)
T ss_pred -------------------------------------------------------hccccCCCccceeChHHhccCCCCc
Confidence 0000112345699999999988999
Q ss_pred cccchhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 512 SSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 512 ~sDIwSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
++|||||||++|||++ + |... ........+.....++.....++++.+|+.+||+.+|.+||++.++++.
T Consensus 222 ~~DvwslG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 222 QSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCcC-CHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 9999999999999997 3 3222 2223333333333333334557888999999999999999999999875
No 340
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.94 E-value=8.3e-27 Score=260.70 Aligned_cols=242 Identities=14% Similarity=0.175 Sum_probs=170.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.++.|.||+|.... .+..++.|...-............+..++...+|||++.+..........+
T Consensus 10 ~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~----------- 74 (284)
T cd07836 10 EGTYATVYKGRNRT----TGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLM----------- 74 (284)
T ss_pred cCCceEEEEEEECC----CCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEE-----------
Confidence 34789999998732 244455544322222222334445667788889999988766544332222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARG--HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~--~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++|||++| +|.+++...+ ..++...++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++
T Consensus 75 -----lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 75 -----LVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred -----EEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 37999986 8999987654 457888999999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
......
T Consensus 149 ~~~~~~-------------------------------------------------------------------------- 154 (284)
T cd07836 149 AFGIPV-------------------------------------------------------------------------- 154 (284)
T ss_pred hhcCCc--------------------------------------------------------------------------
Confidence 533100
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCCC---CcHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGRF---DSER 533 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~f---~~~~ 533 (1092)
.......+|.+|++||.+.+ ..++.++|||||||++|||+++. ....
T Consensus 155 -----------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~ 205 (284)
T cd07836 155 -----------------------------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTN 205 (284)
T ss_pred -----------------------------cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 00013356888999999876 45789999999999999999873 2222
Q ss_pred HHHHHHHhc--------------cc-----cCCCC--------CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 534 ALAAAMSDL--------------RD-----RILPP--------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 534 ~~~~~~~~~--------------~~-----~~~p~--------~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
......... .. ...|. .++..++.+.+++.+||+.+|.+||++.++++||||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 206 NEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred cHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 111111110 00 00010 012346778899999999999999999999999997
No 341
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.94 E-value=1.7e-26 Score=253.77 Aligned_cols=241 Identities=19% Similarity=0.192 Sum_probs=174.0
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.++.|.||++...+ .+..++.|........ .....-..+...++..+|||++.+......+...+
T Consensus 10 ~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~---------- 75 (256)
T cd08220 10 RGAFGIVHLCRRKA----DQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALM---------- 75 (256)
T ss_pred ccCceEEEEEEEcC----CCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEE----------
Confidence 34679999877532 2444555444322222 22233344556777889999887665433222222
Q ss_pred cccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC-cEEEeccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN-QVKYIGPIIQ 376 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~-~vkl~Dfg~~ 376 (1092)
.+|||++|++|.+++... +..++...++.++.|++.+|+|||++||+|+||||+||+++.++ .+|++|||++
T Consensus 76 ------lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~ 149 (256)
T cd08220 76 ------IVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGIS 149 (256)
T ss_pred ------EEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCc
Confidence 389999999999999764 44578888999999999999999999999999999999998654 5799999988
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+......
T Consensus 150 ~~~~~~~------------------------------------------------------------------------- 156 (256)
T cd08220 150 KILSSKS------------------------------------------------------------------------- 156 (256)
T ss_pred eecCCCc-------------------------------------------------------------------------
Confidence 6643100
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
......|+..|+|||.+.+..++.++|+|||||++|+|+++ |....
T Consensus 157 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 205 (256)
T cd08220 157 -------------------------------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN 205 (256)
T ss_pred -------------------------------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc
Confidence 00023577889999999988899999999999999999985 54433
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
........... ..++.....++.+.+|+.+||+++|.+|||+.|+++||||
T Consensus 206 ~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 206 LPALVLKIMSG-TFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred hHHHHHHHHhc-CCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 33333333322 2222233457889999999999999999999999999986
No 342
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.94 E-value=2.2e-26 Score=257.64 Aligned_cols=245 Identities=17% Similarity=0.064 Sum_probs=165.5
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+|.|+||++...-.....+..++.|+..............++...+....|||++.+...........
T Consensus 15 g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~------------ 82 (283)
T cd05080 15 GHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKG------------ 82 (283)
T ss_pred CCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCce------------
Confidence 46799977543111111244455555433222222223345566788889999998655432211100
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
.-.+|||+.|++|.+++... .++..+++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++.+.
T Consensus 83 --~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 83 --LQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred --EEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 11379999999999999764 47888999999999999999999999999999999999999999999999987643
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
.....
T Consensus 159 ~~~~~--------------------------------------------------------------------------- 163 (283)
T cd05080 159 EGHEY--------------------------------------------------------------------------- 163 (283)
T ss_pred Ccchh---------------------------------------------------------------------------
Confidence 10000
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcHH---HHH-
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSER---ALA- 536 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~~---~~~- 536 (1092)
........++..|+|||.+.+..++.++|||||||++|||+++..+.. ...
T Consensus 164 -------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~ 218 (283)
T cd05080 164 -------------------------YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE 218 (283)
T ss_pred -------------------------hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh
Confidence 000001223456999999998889999999999999999998632211 000
Q ss_pred HHH-------------HhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 537 AAM-------------SDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 537 ~~~-------------~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
..+ ..+.....++.....++.+.+|+..||.++|++||++.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 219 EMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred hhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 000 001111112222344678999999999999999999999986
No 343
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.94 E-value=1.7e-26 Score=270.99 Aligned_cols=255 Identities=12% Similarity=0.109 Sum_probs=176.2
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCc-cccccccccccccccccCchhhHhhhhhhhhhccCC-CCCCCccccceecCCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNA-FKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNA-SPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 286 (1092)
+.+|.+...++ +.|.||++..... .......++.|+..............++.+++.... |||++.++.....+..
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~ 115 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP 115 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence 34555544444 6899999975321 112234566665543222222223445666666665 9999987766544333
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC-------------------------------------------
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------------------------------------------- 323 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~------------------------------------------- 323 (1092)
.+ .+||||.||+|.++|...+
T Consensus 116 ~~----------------iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T cd05107 116 IY----------------IITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYM 179 (401)
T ss_pred cE----------------EEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCcccc
Confidence 22 3899999999999996532
Q ss_pred ------------------------------------------------------CCCCHHHHHHHHHHHHHHHHHhhhcC
Q 001366 324 ------------------------------------------------------HKGKRIECLYIFRQIVALVDYHHTQG 349 (1092)
Q Consensus 324 ------------------------------------------------------~~~~~~~~~~i~~qil~~l~~lHs~g 349 (1092)
..++...++.|+.||+.||+|||++|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ 259 (401)
T cd05107 180 DMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN 259 (401)
T ss_pred ccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 12445567889999999999999999
Q ss_pred ccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCccccccccc
Q 001366 350 VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSL 429 (1092)
Q Consensus 350 IvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (1092)
|+||||||+|||++..+.+|++|||+++.+.....
T Consensus 260 ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~--------------------------------------------- 294 (401)
T cd05107 260 CVHRDLAARNVLICEGKLVKICDFGLARDIMRDSN--------------------------------------------- 294 (401)
T ss_pred cCcccCCcceEEEeCCCEEEEEecCcceecccccc---------------------------------------------
Confidence 99999999999999999999999999876431000
Q ss_pred ccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC
Q 001366 430 FPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC 509 (1092)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~ 509 (1092)
........++..|+|||.+.+..+
T Consensus 295 --------------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~ 318 (401)
T cd05107 295 --------------------------------------------------------YISKGSTFLPLKWMAPESIFNNLY 318 (401)
T ss_pred --------------------------------------------------------cccCCCcCCCCceeChHHhcCCCC
Confidence 000012346778999999998889
Q ss_pred CccccchhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 510 TTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 510 t~~sDIwSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
+.++|||||||+||||++ + |............+.....++.....++++.+|+.+||+++|.+||++++|++.
T Consensus 319 ~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 319 TTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred CcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 999999999999999996 3 432222222222222222223333457889999999999999999999999975
No 344
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.94 E-value=1.4e-26 Score=260.41 Aligned_cols=240 Identities=15% Similarity=0.099 Sum_probs=176.2
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++...+ .++.++.|+...... .........+..++....|||++.+++........+
T Consensus 11 ~g~~~~vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~--------- 77 (290)
T cd05580 11 TGSFGRVMLVRHKG----SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLY--------- 77 (290)
T ss_pred cCCCeEEEEEEEcC----CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEE---------
Confidence 35789999988743 244555554422111 112223344556677888999998766544322222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
.+|||+.|++|.+++...+ .++...++.++.||+.||+|||++||+|+||||+||+++.++.+|++|||+++
T Consensus 78 -------~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~ 149 (290)
T cd05580 78 -------LVMEYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAK 149 (290)
T ss_pred -------EEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCcc
Confidence 3899999999999997764 56777899999999999999999999999999999999999999999999876
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.....
T Consensus 150 ~~~~~--------------------------------------------------------------------------- 154 (290)
T cd05580 150 RVKGR--------------------------------------------------------------------------- 154 (290)
T ss_pred ccCCC---------------------------------------------------------------------------
Confidence 53310
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
.....|++.|+|||.+.+..++.++|||||||++|+|+++ |.....
T Consensus 155 -------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 203 (290)
T cd05580 155 -------------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP 203 (290)
T ss_pred -------------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH
Confidence 0033578889999999888899999999999999999986 333332
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
........... ++.....++.+.+++.+||..+|.+|+ +++|+++||||...
T Consensus 204 ~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 204 IQIYEKILEGK--VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred HHHHHHHhcCC--ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence 22222222211 112223478899999999999999999 99999999999764
No 345
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.7e-27 Score=261.89 Aligned_cols=180 Identities=18% Similarity=0.271 Sum_probs=143.7
Q ss_pred cccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccccccc
Q 001366 305 RQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESA 383 (1092)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~ 383 (1092)
.+|..+.||+|.=.|-..| ..+++..++.|+.+|+.||++||+.+||.|||||+||||+..|+|+|.|+|||-++.+
T Consensus 262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~-- 339 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE-- 339 (591)
T ss_pred EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC--
Confidence 3788999999998885543 5688889999999999999999999999999999999999999999999999987652
Q ss_pred cCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccc
Q 001366 384 SLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHT 463 (1092)
Q Consensus 384 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 463 (1092)
T Consensus 340 -------------------------------------------------------------------------------- 339 (591)
T KOG0986|consen 340 -------------------------------------------------------------------------------- 339 (591)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcHHHHHHHHH--h
Q 001366 464 NAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMS--D 541 (1092)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~~~~~~~~~--~ 541 (1092)
.......+||..|||||++.++.|+++.|.|||||+||||+.|-.++..+....+ .
T Consensus 340 ----------------------g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eE 397 (591)
T KOG0986|consen 340 ----------------------GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREE 397 (591)
T ss_pred ----------------------CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHH
Confidence 0112256999999999999999999999999999999999986444333222211 1
Q ss_pred ccccCC--CCCC-CCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhh
Q 001366 542 LRDRIL--PPSF-LSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEF 588 (1092)
Q Consensus 542 ~~~~~~--p~~~-~~~~~~~~~li~~lL~~dP~~Rps-----a~eiL~~~~~~~~ 588 (1092)
+.++++ +..+ ...+++..+||..+|++||++|.. ++++.+||||...
T Consensus 398 vdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l 452 (591)
T KOG0986|consen 398 VDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL 452 (591)
T ss_pred HHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence 112211 1111 234788999999999999999964 5799999999874
No 346
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.94 E-value=2.4e-26 Score=254.57 Aligned_cols=247 Identities=15% Similarity=0.161 Sum_probs=174.3
Q ss_pred hhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC-c-hhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-P-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 212 ~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
.+|.+.+.++ +.|.||++... ..+..++.|....... . ........+..++....|||++.++.....+...
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~----~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~ 77 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCL----LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL 77 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeec----CCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeE
Confidence 4566666554 68999999852 1244455543322111 1 1112333455677788999999866554332222
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~ 364 (1092)
+ .+|+|+.|++|.++++. ....++...++.++.||+.||.|||++||+|+||||+||+++.
T Consensus 78 ~----------------~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~ 141 (267)
T cd08229 78 N----------------IVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA 141 (267)
T ss_pred E----------------EEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC
Confidence 2 37999999999999864 2345777789999999999999999999999999999999999
Q ss_pred CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 365 ~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
++.++++|||++.......
T Consensus 142 ~~~~~l~dfg~~~~~~~~~------------------------------------------------------------- 160 (267)
T cd08229 142 TGVVKLGDLGLGRFFSSKT------------------------------------------------------------- 160 (267)
T ss_pred CCCEEECcchhhhccccCC-------------------------------------------------------------
Confidence 9999999999876533100
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~e 524 (1092)
.......|+..|+|||.+.+..++.++|+|||||++||
T Consensus 161 ------------------------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~ 198 (267)
T cd08229 161 ------------------------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE 198 (267)
T ss_pred ------------------------------------------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHH
Confidence 00013457888999999998889999999999999999
Q ss_pred HcCCCCc---H-HHHHHHHHhccccCCCCCC-CCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 525 LFGRFDS---E-RALAAAMSDLRDRILPPSF-LSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 525 ll~~f~~---~-~~~~~~~~~~~~~~~p~~~-~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
|+++..+ . .........+.....++.. ...++.+.+|+.+||+.+|.+|||+.+|++
T Consensus 199 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 199 MAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 9986322 1 1222222333322233222 235678999999999999999999998876
No 347
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.94 E-value=1.3e-26 Score=258.76 Aligned_cols=244 Identities=16% Similarity=0.204 Sum_probs=174.5
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++.... .+..++.|+...... .........+..++...+||+++........+...+
T Consensus 3 ~g~~g~vy~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~--------- 69 (277)
T cd05577 3 KGGFGEVCACQVKA----TGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLC--------- 69 (277)
T ss_pred CCCceeEEEEEEcC----CCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEE---------
Confidence 46789999986532 244555554422111 111222234666788888999987655543322222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
++|+|++|++|.++|...+ ..++..+++.++.||+.||.|||++||+||||||+||+++.++.+|++|||++
T Consensus 70 -------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~ 142 (277)
T cd05577 70 -------LVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLA 142 (277)
T ss_pred -------EEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcch
Confidence 3899999999999996654 35788889999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.....
T Consensus 143 ~~~~~~-------------------------------------------------------------------------- 148 (277)
T cd05577 143 VELKGG-------------------------------------------------------------------------- 148 (277)
T ss_pred hhhccC--------------------------------------------------------------------------
Confidence 653310
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
.......++..|+|||.+.+..++.++|||||||++|+|+++ |....
T Consensus 149 ------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 198 (277)
T cd05577 149 ------------------------------KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRK 198 (277)
T ss_pred ------------------------------CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCc
Confidence 000023466779999999888899999999999999999986 32221
Q ss_pred ---HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 534 ---ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 534 ---~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
........... ...+.....++.+.+||.+||+.+|.+|| ++.+++.||||...
T Consensus 199 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~ 260 (277)
T cd05577 199 EKVEKEELKRRTLE-MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDL 260 (277)
T ss_pred ccccHHHHHhcccc-ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcC
Confidence 11111111111 11122234578899999999999999999 88889999999764
No 348
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.94 E-value=1.6e-26 Score=254.43 Aligned_cols=234 Identities=14% Similarity=0.100 Sum_probs=163.6
Q ss_pred hccccceeeeCCCCCcc------ccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCcc
Q 001366 219 TLKGKGIVCRGPPLNAF------KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGAR 292 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (1092)
..+|.|.||+|...+.- +.....++.|+..... .....-.++..+++...|||++.++..... ...
T Consensus 4 g~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~----- 75 (259)
T cd05037 4 GQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH--RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN----- 75 (259)
T ss_pred cccccceEEEEEEeccCCccccCCccceeeeeeccccch--hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCc-----
Confidence 45678999999885422 1111123333332211 112333445567788899999987655433 111
Q ss_pred CCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC------
Q 001366 293 TGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN------ 366 (1092)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~------ 366 (1092)
..+|||+.|++|.+++......++...++.+++||+.||+|||++||+||||||+||+++..+
T Consensus 76 -----------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~ 144 (259)
T cd05037 76 -----------IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYV 144 (259)
T ss_pred -----------EEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCc
Confidence 138999999999999987665678889999999999999999999999999999999999887
Q ss_pred -cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 367 -QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 367 -~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
.+|++|||+++.....
T Consensus 145 ~~~kl~Dfg~a~~~~~~--------------------------------------------------------------- 161 (259)
T cd05037 145 PFIKLSDPGIPITVLSR--------------------------------------------------------------- 161 (259)
T ss_pred eeEEeCCCCcccccccc---------------------------------------------------------------
Confidence 7999999988654310
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC--CCCccccchhhhHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG--VCTTSSNIYSLGVLFF 523 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~--~~t~~sDIwSLGvll~ 523 (1092)
....++..|+|||.+.+. .++.++|||||||++|
T Consensus 162 --------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~ 197 (259)
T cd05037 162 --------------------------------------------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLL 197 (259)
T ss_pred --------------------------------------------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHH
Confidence 012345569999999886 7899999999999999
Q ss_pred HHcCC-CCcHHH--HHHHHHhc-cccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 524 ELFGR-FDSERA--LAAAMSDL-RDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 524 ell~~-f~~~~~--~~~~~~~~-~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
||+++ ..+... ........ .....|. .....+.+|+.+||..+|.+||++.++++
T Consensus 198 ~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 198 EICSNGEEPLSTLSSSEKERFYQDQHRLPM---PDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred HHHhCCCCCcccCCchhHHHHHhcCCCCCC---CCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 99973 221111 11111111 1111111 12378889999999999999999999986
No 349
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.94 E-value=1.9e-26 Score=257.34 Aligned_cols=197 Identities=16% Similarity=0.137 Sum_probs=144.5
Q ss_pred hhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHH
Q 001366 260 AAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIV 339 (1092)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil 339 (1092)
..+..++....|||++.+......+...+ .+|||++|++|..++......++...++.++.||+
T Consensus 64 ~~~~~~~~~l~h~niv~~~~~~~~~~~~~----------------lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~ 127 (274)
T cd05076 64 FETASLMSQVSHIHLAFVHGVCVRGSENI----------------MVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLA 127 (274)
T ss_pred HHHHHHHhcCCCCCeeeEEEEEEeCCceE----------------EEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 34455677789999998776655433333 38999999999999976555677889999999999
Q ss_pred HHHHHhhhcCccccCCCCCCeEEccCC-------cEEEecccccccccccccCCCCCCchhhhhccccccccccccccch
Q 001366 340 ALVDYHHTQGVTFLDLKPSSFKLLQSN-------QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASA 412 (1092)
Q Consensus 340 ~~l~~lHs~gIvHrDLKP~Nill~~~~-------~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 412 (1092)
.||+|||++||+||||||+||+++..+ .+|++|||++.....
T Consensus 128 ~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~------------------------------- 176 (274)
T cd05076 128 SALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALS------------------------------- 176 (274)
T ss_pred HHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCcccccccc-------------------------------
Confidence 999999999999999999999997643 378888886643210
Q ss_pred hhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccc
Q 001366 413 KKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ 492 (1092)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (1092)
....
T Consensus 177 ----------------------------------------------------------------------------~~~~ 180 (274)
T cd05076 177 ----------------------------------------------------------------------------REER 180 (274)
T ss_pred ----------------------------------------------------------------------------cccc
Confidence 0012
Q ss_pred cccccccCcccccC-CCCCccccchhhhHHHHHHc-CC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccc
Q 001366 493 LEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELF-GR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLH 567 (1092)
Q Consensus 493 ~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell-~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~ 567 (1092)
.++..|+|||.+.+ ..++.++|||||||++|||+ ++ |..................|+ ...+.+.+|+.+||+
T Consensus 181 ~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~ 257 (274)
T cd05076 181 VERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEKKHRLPE---PSCKELATLISQCLT 257 (274)
T ss_pred ccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHhccCCCC---CCChHHHHHHHHHcc
Confidence 35666999999876 56899999999999999995 33 322211111111111112222 235789999999999
Q ss_pred cCCCCCCCHHHHhhh
Q 001366 568 PEPLSRPTTREILQS 582 (1092)
Q Consensus 568 ~dP~~Rpsa~eiL~~ 582 (1092)
.+|++||++.+||++
T Consensus 258 ~~p~~Rps~~~il~~ 272 (274)
T cd05076 258 YEPTQRPSFRTILRD 272 (274)
T ss_pred cChhhCcCHHHHHHh
Confidence 999999999999875
No 350
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.94 E-value=2.3e-26 Score=252.23 Aligned_cols=241 Identities=17% Similarity=0.124 Sum_probs=170.0
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..+|.|.||++...+ +..++.|+...............+..+++...||+++.+..........+
T Consensus 4 g~g~~g~v~~~~~~~-----~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~---------- 68 (251)
T cd05041 4 GKGNFGDVYKGVLKG-----NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIY---------- 68 (251)
T ss_pred ccCCCceEEEEEEeC-----CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeE----------
Confidence 346789999998743 34444544433322222233445566788889999887665433222222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+|+|+.|++|.+++......++...++.++.|++.+|+|||++||+||||||+||+++.++.+|++|||+++.
T Consensus 69 ------~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~ 142 (251)
T cd05041 69 ------IVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRE 142 (251)
T ss_pred ------EEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeecccccc
Confidence 37999999999999977655677888999999999999999999999999999999999999999999998865
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.......
T Consensus 143 ~~~~~~~------------------------------------------------------------------------- 149 (251)
T cd05041 143 EEGGIYT------------------------------------------------------------------------- 149 (251)
T ss_pred ccCCcce-------------------------------------------------------------------------
Confidence 3310000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~ 534 (1092)
. . -....++..|+|||.+.+..++.++|||||||++|||++ + |.....
T Consensus 150 --------------------~------~--~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~ 201 (251)
T cd05041 150 --------------------V------S--DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN 201 (251)
T ss_pred --------------------e------c--cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH
Confidence 0 0 001112345999999998889999999999999999997 3 333222
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
. .....+.....++.....+..+.+|+.+||..+|.+||++.|+++.
T Consensus 202 ~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~ 248 (251)
T cd05041 202 Q-QTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNE 248 (251)
T ss_pred H-HHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 1 1222222222222233456788999999999999999999999874
No 351
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.94 E-value=5.9e-26 Score=257.52 Aligned_cols=246 Identities=14% Similarity=0.095 Sum_probs=174.1
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchh--hHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD--AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
|.+.+.++ +.|.||+|.... .++.++.|.......... .....++..++...+|||++........+...+
T Consensus 17 y~~~~~lg~g~~g~vy~~~~~~----~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~- 91 (307)
T cd06607 17 FTDLREIGHGSFGAVYFARDVR----TNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAW- 91 (307)
T ss_pred hhhheeecCCCCeEEEEEEEcC----CCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEE-
Confidence 44444333 579999997632 244555554432222222 223445666788889999998665544322222
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
++|||+. ++|.+++......+++.++..++.||+.||.|||++||+||||+|+||+++.++.+|
T Consensus 92 ---------------lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~k 155 (307)
T cd06607 92 ---------------LVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVK 155 (307)
T ss_pred ---------------EEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEE
Confidence 3788987 578888765555688889999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
++|||+++....
T Consensus 156 L~dfg~~~~~~~-------------------------------------------------------------------- 167 (307)
T cd06607 156 LADFGSASLVSP-------------------------------------------------------------------- 167 (307)
T ss_pred EeecCcceecCC--------------------------------------------------------------------
Confidence 999998754220
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc---CCCCCccccchhhhHHHHHHc
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS---GGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~t~~sDIwSLGvll~ell 526 (1092)
.....|+..|+|||.+. ...++.++|||||||++|||+
T Consensus 168 ---------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~ 208 (307)
T cd06607 168 ---------------------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208 (307)
T ss_pred ---------------------------------------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHH
Confidence 00234677799999885 356889999999999999999
Q ss_pred CCCC---cHHHHHHHHHhccccCCCCC-CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 527 GRFD---SERALAAAMSDLRDRILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 527 ~~f~---~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
++.. ........... .....+.. ....+..+.+|+.+||.++|.+||++.+|+.||||...
T Consensus 209 tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 273 (307)
T cd06607 209 ERKPPLFNMNAMSALYHI-AQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE 273 (307)
T ss_pred cCCCCCCCccHHHHHHHH-hcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence 9732 22222222222 22121211 12246778999999999999999999999999999764
No 352
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.94 E-value=1.2e-26 Score=261.46 Aligned_cols=253 Identities=14% Similarity=0.116 Sum_probs=179.1
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+.+.++ +.|+||++.... .+..++.|...... .........+..++....|||++.+.+........+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~----~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~-- 92 (293)
T cd06647 20 KYTRFEKIGQGASGTVYTAIDVA----TGQEVAIKQMNLQQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELW-- 92 (293)
T ss_pred hceeeeEecCCCCeEEEEEEEcC----CCCEEEEEEecccc-chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEE--
Confidence 455544444 679999997421 13344544432211 122233445556778889999987665433222222
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
.++||++|++|.+++... .++..+++.++.||+.||.|||++||+||||||+||+++.++.+|+
T Consensus 93 --------------lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL 156 (293)
T cd06647 93 --------------VVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKL 156 (293)
T ss_pred --------------EEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEE
Confidence 379999999999999764 4677789999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||++.......
T Consensus 157 ~dfg~~~~~~~~~------------------------------------------------------------------- 169 (293)
T cd06647 157 TDFGFCAQITPEQ------------------------------------------------------------------- 169 (293)
T ss_pred ccCcceecccccc-------------------------------------------------------------------
Confidence 9999876533100
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC--
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR-- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~-- 528 (1092)
.......|++.|+|||.+.+..++.++|+|||||++|+|+++
T Consensus 170 ------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~ 213 (293)
T cd06647 170 ------------------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 213 (293)
T ss_pred ------------------------------------cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 000134578889999999888899999999999999999986
Q ss_pred -CCcHHHHHHHHHhccccCC-CCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhcc
Q 001366 529 -FDSERALAAAMSDLRDRIL-PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1092)
Q Consensus 529 -f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~~ 591 (1092)
|.................. .+.....++.+.+|+.+||..+|.+||++.+++.|+||......
T Consensus 214 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~ 278 (293)
T cd06647 214 PYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPL 278 (293)
T ss_pred CCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCccc
Confidence 4333332222111111111 11122346778999999999999999999999999999876543
No 353
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.94 E-value=2.9e-26 Score=260.91 Aligned_cols=244 Identities=16% Similarity=0.142 Sum_probs=166.6
Q ss_pred cccceeeeCCCCCcc---ccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCC
Q 001366 221 KGKGIVCRGPPLNAF---KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
+|.|.||++...+.. ......++.|+...............+..++... .|||++.++.....+...+
T Consensus 23 G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~-------- 94 (314)
T cd05099 23 GCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLY-------- 94 (314)
T ss_pred CCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceE--------
Confidence 468999998642110 1112334444443222222223334455566666 6999998766544322222
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeE
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFK 361 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nil 361 (1092)
.+|||+.|++|.++|.... ..++..+++.++.||+.||+|||++||+||||||+||+
T Consensus 95 --------lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 166 (314)
T cd05099 95 --------VIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL 166 (314)
T ss_pred --------EEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEE
Confidence 3799999999999996532 24677788999999999999999999999999999999
Q ss_pred EccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 362 LLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 362 l~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
++.++.+|++|||+++........
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~-------------------------------------------------------- 190 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYY-------------------------------------------------------- 190 (314)
T ss_pred EcCCCcEEEccccccccccccccc--------------------------------------------------------
Confidence 999999999999998764310000
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHH
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVL 521 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvl 521 (1092)
.......++..|+|||.+.+..++.++|||||||+
T Consensus 191 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~ 225 (314)
T cd05099 191 ---------------------------------------------KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGIL 225 (314)
T ss_pred ---------------------------------------------cccccCCCCccccCHHHHccCCcCccchhhHHHHH
Confidence 00001123356999999999899999999999999
Q ss_pred HHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 522 FFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 522 l~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
+|||++ + |..... ......+.....++.....+.++.+|+.+||..+|.+||++.++++.
T Consensus 226 l~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 289 (314)
T cd05099 226 MWEIFTLGGSPYPGIPV-EELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEA 289 (314)
T ss_pred HHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999997 3 333221 12222222222222233456788999999999999999999999863
No 354
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.94 E-value=4.1e-26 Score=252.14 Aligned_cols=236 Identities=16% Similarity=0.091 Sum_probs=168.5
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|.||+|...+ +..++.|....... ....-.++...+...+|||++.+......+...+
T Consensus 16 ~g~~~~v~~~~~~~-----~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~----------- 77 (261)
T cd05068 16 AGQFGEVWEGLWNN-----TTPVAVKTLKPGTM--DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIY----------- 77 (261)
T ss_pred ccCCccEEEEEecC-----CeEEEEEeeCCCcc--cHHHHHHHHHHHHHCCCCCccceeEEEecCCCee-----------
Confidence 35789999988644 23345544322221 1222334556777888999987665543322222
Q ss_pred ccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+|||+.|++|.+++... +..++..++..++.||+.||.|||++||+||||||+||+++.++.+|++|||+++.
T Consensus 78 -----lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~ 152 (261)
T cd05068 78 -----IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARV 152 (261)
T ss_pred -----eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEE
Confidence 379999999999999654 35678889999999999999999999999999999999999999999999999877
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.......
T Consensus 153 ~~~~~~~------------------------------------------------------------------------- 159 (261)
T cd05068 153 IKEDIYE------------------------------------------------------------------------- 159 (261)
T ss_pred ccCCccc-------------------------------------------------------------------------
Confidence 5411000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~ 534 (1092)
.......+..|+|||.+.+..++.++|||||||++|||++ + |.+...
T Consensus 160 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 210 (261)
T cd05068 160 -----------------------------AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN 210 (261)
T ss_pred -----------------------------ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 0000112346999999998889999999999999999997 4 433322
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
.. ....+.....++.....+..+.+++.+||+.+|.+||++.+|++
T Consensus 211 ~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 211 AE-VLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HH-HHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 22 22222222222333455788999999999999999999999876
No 355
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.94 E-value=2.5e-26 Score=255.07 Aligned_cols=244 Identities=15% Similarity=0.097 Sum_probs=162.4
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..++.|+||+|...++.. ...++.+...............++...+...+|||++.++.........+
T Consensus 4 g~G~fg~v~~~~~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~---------- 71 (269)
T cd05042 4 GNGWFGKVLLGEAHRGMS--KARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYL---------- 71 (269)
T ss_pred CccCCceEEEEEEecCCC--CeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceE----------
Confidence 346789999986533221 12233333222222222333345556677889999998776544322222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCC----CCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGH----KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~----~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg 374 (1092)
.+|||+.|++|.++|..... ..+...++.++.||+.||+|||++||+||||||+|||++.++.+|++|||
T Consensus 72 ------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg 145 (269)
T cd05042 72 ------LVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYG 145 (269)
T ss_pred ------EEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccc
Confidence 37999999999999966432 23556788999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++........
T Consensus 146 ~~~~~~~~~~~--------------------------------------------------------------------- 156 (269)
T cd05042 146 LALEQYPEDYY--------------------------------------------------------------------- 156 (269)
T ss_pred cccccccchhe---------------------------------------------------------------------
Confidence 87653210000
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-------CCCCccccchhhhHHHHHHcC
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-------GVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-------~~~t~~sDIwSLGvll~ell~ 527 (1092)
.......++..|+|||++.. ..++.++|||||||++|||++
T Consensus 157 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~ 204 (269)
T cd05042 157 --------------------------------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFT 204 (269)
T ss_pred --------------------------------eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHh
Confidence 00002345667999998743 456889999999999999997
Q ss_pred -C---CCcHHHHHHHHHhcccc---CCCCC-CCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 528 -R---FDSERALAAAMSDLRDR---ILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 528 -~---f~~~~~~~~~~~~~~~~---~~p~~-~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
+ |............+... ...+. ....++.+..++..|+ .||++||++.+|++-
T Consensus 205 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 205 AADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred CCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 3 43333332222222221 11222 2234566778888888 599999999999863
No 356
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.94 E-value=8.1e-25 Score=260.63 Aligned_cols=272 Identities=21% Similarity=0.292 Sum_probs=234.9
Q ss_pred CCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccce
Q 001366 743 NPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPA 822 (1092)
Q Consensus 743 ~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~ 822 (1092)
..+.....+.|.++++|+........ ..+.+|.+.|.+++|..-+.+|++|+.|.+++|||..+ ..+..
T Consensus 217 ~~~~~~~~s~~~tl~~~~~~~~~~i~----~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~s-------g~C~~ 285 (537)
T KOG0274|consen 217 HDGFFKSGSDDSTLHLWDLNNGYLIL----TRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCST-------GECTH 285 (537)
T ss_pred ecCeEEecCCCceeEEeecccceEEE----eeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCC-------CcEEE
Confidence 34455677888999999865543322 23679999999999998888999999999999999765 34556
Q ss_pred eeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecC
Q 001366 823 VEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN 902 (1092)
Q Consensus 823 ~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~ 902 (1092)
...+|.+.|.|+...+ ..+++||.|.+|++|++.++.++..+.+|..+|.+|..+ +..+++|+.|++|++||+.
T Consensus 286 ~l~gh~stv~~~~~~~---~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~---~~~lvsgs~d~~v~VW~~~ 359 (537)
T KOG0274|consen 286 SLQGHTSSVRCLTIDP---FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD---EPLLVSGSYDGTVKVWDPR 359 (537)
T ss_pred EecCCCceEEEEEccC---ceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec---CCEEEEEecCceEEEEEhh
Confidence 6778999999998875 488999999999999999999999999999999999996 5799999999999999999
Q ss_pred CCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEE
Q 001366 903 EKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLK 981 (1092)
Q Consensus 903 ~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~ 981 (1092)
+++++.++. |...|.++.+.+. ..+++|+.|++|++||+++...++.++.+|...|..+.+ .+++|++++.|++|+
T Consensus 360 ~~~cl~sl~gH~~~V~sl~~~~~--~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~-~~~~Lvs~~aD~~Ik 436 (537)
T KOG0274|consen 360 TGKCLKSLSGHTGRVYSLIVDSE--NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL-RDNFLVSSSADGTIK 436 (537)
T ss_pred hceeeeeecCCcceEEEEEecCc--ceEEeeeeccceEeecCCchhhhhhhhcCCccccccccc-ccceeEeccccccEE
Confidence 999999998 6788999988875 489999999999999999884567899999999987776 478999999999999
Q ss_pred EEEcCCCCCCCCCCCceeEEEcC-CCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeee
Q 001366 982 LWDLKRTSHTGPSTNACSLTFSG-HTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSY 1044 (1092)
Q Consensus 982 vWDl~~~~~~~~~~~~~~~~l~~-h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~ 1044 (1092)
+||.. .+.++.++.+ |...|.++++. ...+++++.|+++++||+.+++.+...
T Consensus 437 ~WD~~--------~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l 490 (537)
T KOG0274|consen 437 LWDAE--------EGECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIRTL 490 (537)
T ss_pred Eeecc--------cCceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCchhhhh
Confidence 99998 5678899988 67888888776 458999999999999999998877654
No 357
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.94 E-value=2.3e-26 Score=265.35 Aligned_cols=251 Identities=18% Similarity=0.223 Sum_probs=175.0
Q ss_pred ccccceeeeCCCCCccccccccccccccccc-cCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTT-TMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.++.|.||++... ..+..++.|+.... ...........+..++...+|||++.+.+....+.... .
T Consensus 25 ~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-----~---- 91 (343)
T cd07880 25 SGAYGTVCSALDR----RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD-----R---- 91 (343)
T ss_pred ecCCeEEEEEEEC----CCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc-----c----
Confidence 3467999998752 12444555543221 11112223446667788889999998766544332221 0
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
+...-.+|+|+ |++|.++++.. .++...++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++.
T Consensus 92 -~~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~ 167 (343)
T cd07880 92 -FHDFYLVMPFM-GTDLGKLMKHE--KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 167 (343)
T ss_pred -cceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccc
Confidence 01112478887 88999998753 577889999999999999999999999999999999999999999999998765
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
....
T Consensus 168 ~~~~---------------------------------------------------------------------------- 171 (343)
T cd07880 168 TDSE---------------------------------------------------------------------------- 171 (343)
T ss_pred cccC----------------------------------------------------------------------------
Confidence 3200
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
.....++++|+|||.+.+ ..++.++|+|||||++|+|+++ |.....
T Consensus 172 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 221 (343)
T cd07880 172 ------------------------------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDH 221 (343)
T ss_pred ------------------------------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 002356888999999876 4588999999999999999986 333222
Q ss_pred HHHHHHhccccC---------------------CC--------CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 535 LAAAMSDLRDRI---------------------LP--------PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 535 ~~~~~~~~~~~~---------------------~p--------~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
............ +| ......++.+.+++.+||+.||.+|||+.+++.||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~ 301 (343)
T cd07880 222 LDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYF 301 (343)
T ss_pred HHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccH
Confidence 212111111000 00 1123456778999999999999999999999999999
Q ss_pred hhhhccch
Q 001366 586 NEFQEVCA 593 (1092)
Q Consensus 586 ~~~~~~~~ 593 (1092)
....+...
T Consensus 302 ~~~~~~~~ 309 (343)
T cd07880 302 EEFHDPED 309 (343)
T ss_pred hhhcCccc
Confidence 88755443
No 358
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.94 E-value=3.8e-26 Score=253.29 Aligned_cols=245 Identities=16% Similarity=0.100 Sum_probs=169.7
Q ss_pred ccccceeeeCCCCCcc--ccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAF--KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|+||+|...+.. ......++.|.............-.++...+...+|||++.+......+...+
T Consensus 5 ~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~--------- 75 (269)
T cd05044 5 SGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQY--------- 75 (269)
T ss_pred cccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeE---------
Confidence 4578999999875422 11123344444322221223333445666788889999998665533222222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhc------CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC-----
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNAR------GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN----- 366 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~------~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~----- 366 (1092)
.+|+|+.|++|.++|... ...++..+++.++.||+.||.|||++||+|+||||+||+++..+
T Consensus 76 -------~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~ 148 (269)
T cd05044 76 -------IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADR 148 (269)
T ss_pred -------EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCc
Confidence 379999999999999642 22366778999999999999999999999999999999999887
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+|++|||+++........
T Consensus 149 ~~~l~dfg~~~~~~~~~~~------------------------------------------------------------- 167 (269)
T cd05044 149 VVKIGDFGLARDIYKSDYY------------------------------------------------------------- 167 (269)
T ss_pred ceEECCccccccccccccc-------------------------------------------------------------
Confidence 8999999988764310000
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
.......++..|+|||.+.++.++.++|||||||++|||+
T Consensus 168 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ell 207 (269)
T cd05044 168 ----------------------------------------RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEIL 207 (269)
T ss_pred ----------------------------------------ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHH
Confidence 0000123456799999999999999999999999999999
Q ss_pred C-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 527 G-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 527 ~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
+ + |....... ....+.....+......++.+.+|+.+||.++|.+||++.+|++.
T Consensus 208 t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 266 (269)
T cd05044 208 TLGQQPYPALNNQE-VLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEI 266 (269)
T ss_pred HcCCCCCcccCHHH-HHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 6 4 43322222 222222222222333456778899999999999999999998763
No 359
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.94 E-value=2.8e-26 Score=257.46 Aligned_cols=244 Identities=16% Similarity=0.100 Sum_probs=169.2
Q ss_pred ccccceeeeCCCCCccc-cccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFK-ERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.+|+|.||++......+ ..+..++.|+............-..+..++....|||++.+......+...+
T Consensus 15 ~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~---------- 84 (288)
T cd05050 15 QGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC---------- 84 (288)
T ss_pred ccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE----------
Confidence 35789999987532111 1234555555433222222233334566778889999998665433222222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcC---------------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCC
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARG---------------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKP 357 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~---------------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP 357 (1092)
.+|||+.|++|.++|.... ..++..+++.++.||+.||+|||++||+||||||
T Consensus 85 ------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p 158 (288)
T cd05050 85 ------LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLAT 158 (288)
T ss_pred ------EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccH
Confidence 3799999999999996432 2356678899999999999999999999999999
Q ss_pred CCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCc
Q 001366 358 SSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNK 437 (1092)
Q Consensus 358 ~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (1092)
+||+++.++.+|++|||+++.+......
T Consensus 159 ~nil~~~~~~~~l~dfg~~~~~~~~~~~---------------------------------------------------- 186 (288)
T cd05050 159 RNCLVGENMVVKIADFGLSRNIYSADYY---------------------------------------------------- 186 (288)
T ss_pred hheEecCCCceEECccccceecccCccc----------------------------------------------------
Confidence 9999999999999999987654310000
Q ss_pred ccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchh
Q 001366 438 IETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYS 517 (1092)
Q Consensus 438 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwS 517 (1092)
........+..|+|||.+.+..++.++||||
T Consensus 187 -------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s 217 (288)
T cd05050 187 -------------------------------------------------KASENDAIPIRWMPPESIFYNRYTTESDVWA 217 (288)
T ss_pred -------------------------------------------------cccCCCccChhhcCHHHHhcCCCCchhHHHH
Confidence 0000112345699999999889999999999
Q ss_pred hhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 518 LGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 518 LGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
|||++|||++ + |.+... ......+.....++.....++.+.+|+.+||..+|.+|||+.|+++
T Consensus 218 lG~il~el~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 218 YGVVLWEIFSYGMQPYYGMAH-EEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHHHHHhCCCCCCCCCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 9999999996 3 322222 2233333333333333445788999999999999999999999876
No 360
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.94 E-value=4.1e-26 Score=257.23 Aligned_cols=252 Identities=14% Similarity=0.103 Sum_probs=170.0
Q ss_pred hHHHhhhcc--ccceeeeCCCCCc----------cccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccc
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNA----------FKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTA 280 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (1092)
+|.+.+.++ |.|+||++...+. .......++.|+............-.++...+...+|||++.+.+.
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~ 85 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGV 85 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEE
Confidence 455555544 7899998765320 0000112333433221111122233445667888899999987776
Q ss_pred eecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC-----------CCCCHHHHHHHHHHHHHHHHHhhhcC
Q 001366 281 VVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-----------HKGKRIECLYIFRQIVALVDYHHTQG 349 (1092)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-----------~~~~~~~~~~i~~qil~~l~~lHs~g 349 (1092)
...+...+ .+|||+.|++|.+++.... ..++...++.++.||+.||.|||++|
T Consensus 86 ~~~~~~~~----------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 149 (295)
T cd05097 86 CVSDDPLC----------------MITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN 149 (295)
T ss_pred EcCCCccE----------------EEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 55433332 3899999999999996532 13566788999999999999999999
Q ss_pred ccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCccccccccc
Q 001366 350 VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSL 429 (1092)
Q Consensus 350 IvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (1092)
|+||||||+||+++.++.+|++|||+++.+.....
T Consensus 150 i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--------------------------------------------- 184 (295)
T cd05097 150 FVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY--------------------------------------------- 184 (295)
T ss_pred eeccccChhhEEEcCCCcEEecccccccccccCcc---------------------------------------------
Confidence 99999999999999999999999998865431000
Q ss_pred ccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC
Q 001366 430 FPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC 509 (1092)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~ 509 (1092)
........++..|+|||.+.+..+
T Consensus 185 --------------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~ 208 (295)
T cd05097 185 --------------------------------------------------------YRIQGRAVLPIRWMAWESILLGKF 208 (295)
T ss_pred --------------------------------------------------------eeccCcCcCceeecChhhhccCCc
Confidence 000012344667999999998899
Q ss_pred CccccchhhhHHHHHHcCC-----CCcHHHHH--HHH----HhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001366 510 TTSSNIYSLGVLFFELFGR-----FDSERALA--AAM----SDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1092)
Q Consensus 510 t~~sDIwSLGvll~ell~~-----f~~~~~~~--~~~----~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~e 578 (1092)
+.++|||||||++|||++. |....... ... ...............++.+.+|+.+||..+|.+||++.+
T Consensus 209 ~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~ 288 (295)
T cd05097 209 TTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNK 288 (295)
T ss_pred CchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence 9999999999999999872 33221111 111 111111222223345688999999999999999999999
Q ss_pred Hhh
Q 001366 579 ILQ 581 (1092)
Q Consensus 579 iL~ 581 (1092)
|++
T Consensus 289 i~~ 291 (295)
T cd05097 289 IHH 291 (295)
T ss_pred HHH
Confidence 976
No 361
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.94 E-value=3.7e-26 Score=253.37 Aligned_cols=245 Identities=13% Similarity=0.090 Sum_probs=169.2
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|+||+|.....-.. ...++.|................+..++....|||++.+..........+
T Consensus 15 ~g~~g~vy~~~~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~----------- 82 (268)
T cd05063 15 AGEFGEVFRGILKMPGRK-EVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM----------- 82 (268)
T ss_pred CCCCccEEEEEEecCCCC-ceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE-----------
Confidence 346799999986321000 11233333211111222223344556778889999987655443222222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+|||+.|++|.+++......++..+++.++.|++.||+|||++||+||||||+||+++.++.+|++|||++...
T Consensus 83 -----lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 83 -----IITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred -----EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceec
Confidence 389999999999999776566788899999999999999999999999999999999999999999999988654
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
......
T Consensus 158 ~~~~~~-------------------------------------------------------------------------- 163 (268)
T cd05063 158 EDDPEG-------------------------------------------------------------------------- 163 (268)
T ss_pred cccccc--------------------------------------------------------------------------
Confidence 310000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~ 535 (1092)
.........+..|+|||.+.+..++.++|||||||++|||++ + |.....
T Consensus 164 --------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~- 216 (268)
T cd05063 164 --------------------------TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN- 216 (268)
T ss_pred --------------------------ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-
Confidence 000001122346999999998889999999999999999986 4 322222
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
...+..+......|.....++.+.+|+.+||..+|.+||++.+|++.
T Consensus 217 ~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~ 263 (268)
T cd05063 217 HEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNL 263 (268)
T ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 22333333333334444567888999999999999999999999863
No 362
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.94 E-value=2e-26 Score=253.60 Aligned_cols=241 Identities=17% Similarity=0.173 Sum_probs=174.2
Q ss_pred cccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
++.|.||++.... .+..++.|...... ..........+...++..+|||++.+.+....+...+
T Consensus 11 g~~g~~~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~----------- 75 (256)
T cd08218 11 GSFGKAILVKSKE----DGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLY----------- 75 (256)
T ss_pred CCceEEEEEEEcC----CCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEE-----------
Confidence 3567888776522 13344444332211 1222234455566778889999887655533222222
Q ss_pred ccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
+++||+.|++|.+++... ...++..+++.++.||+.||.|||++||+|+||+|+||+++.++.++++|||++..
T Consensus 76 -----lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~ 150 (256)
T cd08218 76 -----IVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARV 150 (256)
T ss_pred -----EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceee
Confidence 379999999999999653 34567878999999999999999999999999999999999999999999998865
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.....
T Consensus 151 ~~~~~--------------------------------------------------------------------------- 155 (256)
T cd08218 151 LNSTV--------------------------------------------------------------------------- 155 (256)
T ss_pred cCcch---------------------------------------------------------------------------
Confidence 33100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
.......|++.|+|||.+.+..++.++|+|||||++|+|+++ |......
T Consensus 156 ----------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~ 207 (256)
T cd08218 156 ----------------------------ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK 207 (256)
T ss_pred ----------------------------hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH
Confidence 000123577889999999988899999999999999999987 3333333
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
......+. ...++.....++.+.++|.+||+++|.+||++.++|+||||
T Consensus 208 ~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 208 NLVLKIIR-GSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHHHHhc-CCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 33333332 23333444567889999999999999999999999999997
No 363
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=4.9e-25 Score=243.87 Aligned_cols=243 Identities=21% Similarity=0.283 Sum_probs=210.9
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001366 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1092)
Q Consensus 775 l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~ 854 (1092)
+.-....|+++.|-.||++||+|+..|.|+|||+.+ -........|..+|..+.|+|+++.+|++|+.|+.++
T Consensus 64 ~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~-------r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k 136 (487)
T KOG0310|consen 64 FSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS-------RVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVK 136 (487)
T ss_pred HHhhccceeEEEeecCCeEEEccCCcCcEEEecccc-------HHHHHHHhhccCceeEEEecccCCeEEEecCCCceEE
Confidence 345577899999999999999999999999999654 1122345679999999999999899999999999999
Q ss_pred EEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCC-ceeeeEecCCceEEEEEccCCCeEEEEEE
Q 001366 855 LWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEK-NSLATIKNIANVCCVQFSAHSSHLLAFGS 933 (1092)
Q Consensus 855 IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~-~~l~~l~~~~~V~sl~fsp~~~~~latgs 933 (1092)
+||+.+......+.+|++.|.|.+|+|.++.+++|||+||+|++||+++. ..+.++.|..+|.++.|-|.|. ++|+++
T Consensus 137 ~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs-~iasAg 215 (487)
T KOG0310|consen 137 YWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGS-LIASAG 215 (487)
T ss_pred EEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCCCC-EEEEcC
Confidence 99999988777889999999999999988889999999999999999987 7888999999999999999986 666554
Q ss_pred CCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEE
Q 001366 934 ADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFV 1012 (1092)
Q Consensus 934 ~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v 1012 (1092)
...|++||+-++.+.+..+..|.+.|+|+++. ++..|+||+-|+.+++||+.+ .+.+..+. ..++|.++
T Consensus 216 -Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~--------~Kvv~s~~-~~~pvLsi 285 (487)
T KOG0310|consen 216 -GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTN--------YKVVHSWK-YPGPVLSI 285 (487)
T ss_pred -CCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccc--------eEEEEeee-cccceeeE
Confidence 56899999998877666666799999999997 778999999999999999773 34455553 57899999
Q ss_pred EEecCCCEEEEEecCCcEEEEeC
Q 001366 1013 GLSTADGYIACGSESNEVYAYHR 1035 (1092)
Q Consensus 1013 ~~spdg~~lasgs~Dg~I~Iwd~ 1035 (1092)
+++|++..++.|..||.+.+=+.
T Consensus 286 avs~dd~t~viGmsnGlv~~rr~ 308 (487)
T KOG0310|consen 286 AVSPDDQTVVIGMSNGLVSIRRR 308 (487)
T ss_pred EecCCCceEEEecccceeeeehh
Confidence 99999999999999998877743
No 364
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.94 E-value=3.9e-26 Score=253.61 Aligned_cols=241 Identities=15% Similarity=0.091 Sum_probs=170.2
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+|.|.||+|...+.-.. ...++.|................+..++....|||++..+.....+.
T Consensus 17 g~~g~v~~~~~~~~~~~-~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--------------- 80 (270)
T cd05056 17 GQFGDVYQGVYMSPENE-KIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENP--------------- 80 (270)
T ss_pred ccceeEEEEEEecCCCC-CcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCC---------------
Confidence 57899999976331100 12233343322222222333444556777889999998665422111
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
...+|||+.+++|.++|......++...++.++.||+.||+|||++|++||||||+||+++.++.+|++|||+++...
T Consensus 81 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 81 --VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred --cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecc
Confidence 113899999999999998766667888999999999999999999999999999999999999999999999887643
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
.....
T Consensus 159 ~~~~~--------------------------------------------------------------------------- 163 (270)
T cd05056 159 DESYY--------------------------------------------------------------------------- 163 (270)
T ss_pred cccce---------------------------------------------------------------------------
Confidence 10000
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHHH
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALA 536 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~~ 536 (1092)
..+...++..|+|||.+....++.++|||||||++|||++ + |.......
T Consensus 164 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~ 216 (270)
T cd05056 164 ---------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND 216 (270)
T ss_pred ---------------------------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence 0001123456999999988889999999999999999885 3 44433333
Q ss_pred HHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 537 AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 537 ~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
.... +.....++.....++.+.+|+.+||.++|.+|||+.+++..
T Consensus 217 ~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 217 VIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred HHHH-HHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 3322 22222223334557889999999999999999999998874
No 365
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.94 E-value=3.6e-26 Score=278.14 Aligned_cols=185 Identities=17% Similarity=0.155 Sum_probs=131.5
Q ss_pred CcccccCCCCCHHHHHhhcCCC-------------------CCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc
Q 001366 304 LRQGSSDHGVNLREWLNARGHK-------------------GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 304 ~~~~~~~~GgsL~~~l~~~~~~-------------------~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~ 364 (1092)
.++++|+.+++|.+++...... .....+..|+.||+.||+|||++||+||||||+|||++.
T Consensus 211 ~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~ 290 (566)
T PLN03225 211 WLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSE 290 (566)
T ss_pred EEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeC
Confidence 3589999999999999754321 122346689999999999999999999999999999986
Q ss_pred -CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCc
Q 001366 365 -SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANE 443 (1092)
Q Consensus 365 -~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1092)
.+.+|++|||+++.+.....
T Consensus 291 ~~~~~KL~DFGlA~~l~~~~~----------------------------------------------------------- 311 (566)
T PLN03225 291 GSGSFKIIDLGAAADLRVGIN----------------------------------------------------------- 311 (566)
T ss_pred CCCcEEEEeCCCccccccccc-----------------------------------------------------------
Confidence 57899999999976431000
Q ss_pred cccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC----------------
Q 001366 444 SDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG---------------- 507 (1092)
Q Consensus 444 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~---------------- 507 (1092)
......+||+.|||||.+...
T Consensus 312 -------------------------------------------~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~s 348 (566)
T PLN03225 312 -------------------------------------------YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALS 348 (566)
T ss_pred -------------------------------------------cCCcccccCCCccChHHhhccCCCCCCcccccccccc
Confidence 000145778899999976432
Q ss_pred ------CCCccccchhhhHHHHHHcCC-CCcHHHHHHHHHhcccc---------CCCCCC-----------CCCChhHHH
Q 001366 508 ------VCTTSSNIYSLGVLFFELFGR-FDSERALAAAMSDLRDR---------ILPPSF-----------LSENPKEAG 560 (1092)
Q Consensus 508 ------~~t~~sDIwSLGvll~ell~~-f~~~~~~~~~~~~~~~~---------~~p~~~-----------~~~~~~~~~ 560 (1092)
.++.++|||||||+||||+++ |............+... ..++.. ........+
T Consensus 349 p~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~d 428 (566)
T PLN03225 349 PVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWE 428 (566)
T ss_pred chhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHH
Confidence 234567999999999999986 44443333332222211 011110 111223458
Q ss_pred HHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 561 FCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 561 li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
||.+||++||.+|||+.++|+||||.....
T Consensus 429 Li~~mL~~dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 429 LLKSMMRFKGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred HHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence 999999999999999999999999987544
No 366
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.94 E-value=2.3e-26 Score=257.91 Aligned_cols=245 Identities=15% Similarity=0.112 Sum_probs=166.0
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..++.|.||++.... .+..++.|...............++...+... .|||++.++.........+
T Consensus 13 g~G~~g~vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~--------- 79 (288)
T cd06616 13 GRGAFGTVNKMLHKP----SGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCW--------- 79 (288)
T ss_pred CCCCceEEEEEEECC----CCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEE---------
Confidence 345789999987632 24445555443222222233333444445455 5999998665433211111
Q ss_pred ccccCCCcccccCCCCCHHHHH---hh-cCCCCCHHHHHHHHHHHHHHHHHhhhc-CccccCCCCCCeEEccCCcEEEec
Q 001366 298 SCWIGGLRQGSSDHGVNLREWL---NA-RGHKGKRIECLYIFRQIVALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIG 372 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l---~~-~~~~~~~~~~~~i~~qil~~l~~lHs~-gIvHrDLKP~Nill~~~~~vkl~D 372 (1092)
..|+|+.+ +|.++. .. ....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+|++|
T Consensus 80 -------~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~d 151 (288)
T cd06616 80 -------ICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCD 151 (288)
T ss_pred -------EEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEee
Confidence 25777654 555443 22 234678889999999999999999974 999999999999999999999999
Q ss_pred ccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCC
Q 001366 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1092)
Q Consensus 373 fg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 452 (1092)
||+++.+..+.
T Consensus 152 fg~~~~~~~~~--------------------------------------------------------------------- 162 (288)
T cd06616 152 FGISGQLVDSI--------------------------------------------------------------------- 162 (288)
T ss_pred cchhHHhccCC---------------------------------------------------------------------
Confidence 99886543100
Q ss_pred CCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC---CCCccccchhhhHHHHHHcCCC
Q 001366 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG---VCTTSSNIYSLGVLFFELFGRF 529 (1092)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~---~~t~~sDIwSLGvll~ell~~f 529 (1092)
......|+..|+|||.+.+. .++.++|||||||++|||++|.
T Consensus 163 -----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~ 207 (288)
T cd06616 163 -----------------------------------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGK 207 (288)
T ss_pred -----------------------------------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCC
Confidence 00123567889999999876 6899999999999999999863
Q ss_pred ---CcHHHHHHHHHhccccCCCC----CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 530 ---DSERALAAAMSDLRDRILPP----SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 530 ---~~~~~~~~~~~~~~~~~~p~----~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
.........+........|. .....++++.+|+.+||+++|++|||+.+|+.||||...
T Consensus 208 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 208 FPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred CCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence 32222222222222222111 112356788999999999999999999999999999764
No 367
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.94 E-value=1.3e-26 Score=286.94 Aligned_cols=259 Identities=19% Similarity=0.170 Sum_probs=172.6
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||+|... .++..++.|+....... ....+-.++...+...+|||++.++.....+...+
T Consensus 12 kGgfG~VYlA~d~----~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~ly--------- 78 (932)
T PRK13184 12 KGGMGEVYLAYDP----VCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVY--------- 78 (932)
T ss_pred cCCCEEEEEEEEC----CCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEE---------
Confidence 4578999999762 23555666554322111 12233445667788889999998766544333222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcC----------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARG----------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~----------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~ 367 (1092)
.+|+|++|++|.++|.... ...+...++.++.||+.||+|||++||+||||||+||+++..+.
T Consensus 79 -------LVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~ 151 (932)
T PRK13184 79 -------YTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGE 151 (932)
T ss_pred -------EEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCC
Confidence 2799999999999996421 12344567899999999999999999999999999999999999
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+|++|||+++..........
T Consensus 152 vKLiDFGLAk~i~~~~~~~~------------------------------------------------------------ 171 (932)
T PRK13184 152 VVILDWGAAIFKKLEEEDLL------------------------------------------------------------ 171 (932)
T ss_pred EEEEecCcceeccccccccc------------------------------------------------------------
Confidence 99999999987531100000
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~ 527 (1092)
+..... .+. ...........+||+.|||||.+.+..++.++|||||||+||||++
T Consensus 172 ~l~~~~-~~s------------------------~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLT 226 (932)
T PRK13184 172 DIDVDE-RNI------------------------CYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLT 226 (932)
T ss_pred cccccc-ccc------------------------cccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHH
Confidence 000000 000 0000011124579999999999999999999999999999999998
Q ss_pred C---CCcHHHHHHHHHhcc-ccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 528 R---FDSERALAAAMSDLR-DRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 528 ~---f~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
+ |.............. .......+...++.+.+++.+||++||.+||++.+.|...
T Consensus 227 G~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~ 286 (932)
T PRK13184 227 LSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQD 286 (932)
T ss_pred CCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 6 333222211111111 1111112335678889999999999999998877766554
No 368
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.94 E-value=8.8e-26 Score=257.01 Aligned_cols=243 Identities=14% Similarity=0.115 Sum_probs=173.8
Q ss_pred hhccccceeeeCCCCCccccccccccccccccccCch--hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCC
Q 001366 218 TTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS--DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 218 ~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
-..++.|.||+|.... .+..++.|+........ .......+..++...+|||++.+......+...+
T Consensus 29 lg~g~~g~v~~~~~~~----~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~------- 97 (313)
T cd06633 29 IGHGSFGAVYFATNSH----TNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAW------- 97 (313)
T ss_pred eccCCCeEEEEEEECC----CCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE-------
Confidence 3456789999997522 24455555543222211 1122334556777889999997665544332222
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
++|||+. ++|.+++......++..+++.++.||+.+|.|||++||+|+||||+||+++.++.+|++|||+
T Consensus 98 ---------lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~ 167 (313)
T cd06633 98 ---------LVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGS 167 (313)
T ss_pred ---------EEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCC
Confidence 3799996 578888876666788889999999999999999999999999999999999999999999997
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
+.....
T Consensus 168 ~~~~~~-------------------------------------------------------------------------- 173 (313)
T cd06633 168 ASKSSP-------------------------------------------------------------------------- 173 (313)
T ss_pred CcccCC--------------------------------------------------------------------------
Confidence 643110
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc---CCCCCccccchhhhHHHHHHcCCC---
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS---GGVCTTSSNIYSLGVLFFELFGRF--- 529 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~t~~sDIwSLGvll~ell~~f--- 529 (1092)
.....|+..|+|||.+. ...++.++|||||||++|||+++.
T Consensus 174 ---------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~ 220 (313)
T cd06633 174 ---------------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 220 (313)
T ss_pred ---------------------------------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 01335778899999984 356889999999999999999863
Q ss_pred CcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 530 DSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
.........................+..+.+|+.+||+++|.+||++.+++.||||...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~ 279 (313)
T cd06633 221 FNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD 279 (313)
T ss_pred CCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence 33333333332222221111222345678999999999999999999999999999864
No 369
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.94 E-value=4.4e-26 Score=257.11 Aligned_cols=245 Identities=12% Similarity=0.083 Sum_probs=166.2
Q ss_pred ccccceeeeCCCCCcccc------------ccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKE------------RRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
.+|.|.||++...+.... ....++.|+..............++...+...+|||++.++.....+...
T Consensus 15 ~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 94 (296)
T cd05095 15 EGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPL 94 (296)
T ss_pred CCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 347899998764331110 01123333332211112222334556678888999999877765543333
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCC----------CCCHHHHHHHHHHHHHHHHHhhhcCccccCCCC
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH----------KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKP 357 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~----------~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP 357 (1092)
+ .+|||+.|++|.+++..... .++..+++.++.||+.||+|||++||+||||||
T Consensus 95 ~----------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp 158 (296)
T cd05095 95 C----------------MITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLAT 158 (296)
T ss_pred E----------------EEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCCh
Confidence 3 38999999999999965431 355567999999999999999999999999999
Q ss_pred CCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCc
Q 001366 358 SSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNK 437 (1092)
Q Consensus 358 ~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (1092)
+||+++.++.++++|||+++.+......
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~---------------------------------------------------- 186 (296)
T cd05095 159 RNCLVGKNYTIKIADFGMSRNLYSGDYY---------------------------------------------------- 186 (296)
T ss_pred heEEEcCCCCEEeccCcccccccCCcce----------------------------------------------------
Confidence 9999999999999999988764310000
Q ss_pred ccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchh
Q 001366 438 IETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYS 517 (1092)
Q Consensus 438 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwS 517 (1092)
.......++..|++||.+.++.++.++||||
T Consensus 187 -------------------------------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwS 217 (296)
T cd05095 187 -------------------------------------------------RIQGRAVLPIRWMSWESILLGKFTTASDVWA 217 (296)
T ss_pred -------------------------------------------------eccCcCcCccccCCHHHHhcCCccchhhhhH
Confidence 0000123356699999988888999999999
Q ss_pred hhHHHHHHcC--C---CCcHHHHHHH------HHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 518 LGVLFFELFG--R---FDSERALAAA------MSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 518 LGvll~ell~--~---f~~~~~~~~~------~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
|||+||||++ + |......... ..........+.....++.+.+|+.+||+.+|.+||++.+|++
T Consensus 218 lG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 218 FGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999996 2 3222111111 1111111222233345688899999999999999999999976
No 370
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.93 E-value=2.6e-26 Score=252.46 Aligned_cols=241 Identities=17% Similarity=0.162 Sum_probs=175.1
Q ss_pred cccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
+|.|.||++...+ .+..++.|....... ........++...++..+|+|++.++.....+...+
T Consensus 11 g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~----------- 75 (257)
T cd08225 11 GSFGKIYLAKAKS----DSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLF----------- 75 (257)
T ss_pred CCcceEEEEEEcC----CCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEE-----------
Confidence 4678999988743 233344444322211 122333445666788889999998766543332222
Q ss_pred ccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc-EEEecccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ-VKYIGPIIQK 377 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~-vkl~Dfg~~~ 377 (1092)
+++||+.|++|.+++... +..++...++.++.||+.||.|||++||+|+||||+||+++.++. +|++|||.+.
T Consensus 76 -----lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~ 150 (257)
T cd08225 76 -----IVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIAR 150 (257)
T ss_pred -----EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccch
Confidence 389999999999999653 345788889999999999999999999999999999999998754 6999999776
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
......
T Consensus 151 ~~~~~~-------------------------------------------------------------------------- 156 (257)
T cd08225 151 QLNDSM-------------------------------------------------------------------------- 156 (257)
T ss_pred hccCCc--------------------------------------------------------------------------
Confidence 533100
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
.......|+..|+|||.+.+..++.++|+|||||++|||+++ |.....
T Consensus 157 -----------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 207 (257)
T cd08225 157 -----------------------------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL 207 (257)
T ss_pred -----------------------------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH
Confidence 000123577889999999888899999999999999999986 333322
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
....+ ......+++.....+..+.+++.+||..+|++|||+.+++.||||
T Consensus 208 ~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 208 HQLVL-KICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHH-HHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 22222 233333444445567889999999999999999999999999997
No 371
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.93 E-value=4.2e-26 Score=256.34 Aligned_cols=245 Identities=14% Similarity=0.076 Sum_probs=166.4
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
++.|+||++...+ .+..++.|+...... ....-.++...+... +|||++.++.......... .+-
T Consensus 33 g~~~~vy~~~~~~----~~~~~aik~~~~~~~--~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~----~~~---- 98 (291)
T cd06639 33 GTYGKVYKVTNKK----DGSLAAVKILDPISD--VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLV----GGQ---- 98 (291)
T ss_pred CCCeEEEEEEECC----CCCEEEEEEeccccc--HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccC----CCe----
Confidence 4668999987632 234445544422111 111112233344444 7999987665533211100 011
Q ss_pred ccCCCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
...+|||++|++|.++++. .+..+++..++.++.||+.||+|||++||+||||||+||+++.++.+|++|||++
T Consensus 99 ---~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~ 175 (291)
T cd06639 99 ---LWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVS 175 (291)
T ss_pred ---eEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccc
Confidence 1248999999999999863 3456788899999999999999999999999999999999999999999999988
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.......
T Consensus 176 ~~~~~~~~------------------------------------------------------------------------ 183 (291)
T cd06639 176 AQLTSTRL------------------------------------------------------------------------ 183 (291)
T ss_pred hhcccccc------------------------------------------------------------------------
Confidence 76431000
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-----CCCccccchhhhHHHHHHcCCC--
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-----VCTTSSNIYSLGVLFFELFGRF-- 529 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-----~~t~~sDIwSLGvll~ell~~f-- 529 (1092)
......|+..|+|||.+... .++.++|||||||++|||+++.
T Consensus 184 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p 232 (291)
T cd06639 184 -------------------------------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPP 232 (291)
T ss_pred -------------------------------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCC
Confidence 00023577889999998653 3689999999999999999873
Q ss_pred -CcHHHHHHHHHhccccCCCC--CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001366 530 -DSERALAAAMSDLRDRILPP--SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1092)
Q Consensus 530 -~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~ 586 (1092)
.............+ ...+. ......+.+.+|+.+||+++|++||++.+|++||||+
T Consensus 233 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 233 LFDMHPVKTLFKIPR-NPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred CCCCcHHHHHHHHhc-CCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 33222222222222 21111 1223456788999999999999999999999999984
No 372
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.93 E-value=4.7e-26 Score=251.50 Aligned_cols=241 Identities=16% Similarity=0.089 Sum_probs=169.9
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||++...+ +..++.|.+....... ..-.++...+...+||+++.++.... ...
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~k~~~~~~~~~--~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~----- 74 (260)
T cd05070 8 LQLIKKLGNGQFGEVWMGTWNG-----NTKVAVKTLKPGTMSP--ESFLEEAQIMKKLRHDKLVQLYAVVS-EEP----- 74 (260)
T ss_pred hhhhheeccccCceEEEEEecC-----CceeEEEEecCCCCCH--HHHHHHHHHHHhcCCCceEEEEeEEC-CCC-----
Confidence 3444443 4789999997643 3344554443322211 12234455677889999887654321 111
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
. ..+|+|+.|++|.+++... ...++...++.++.||+.||.|||++||+||||||+||+++.++.+|+
T Consensus 75 ----~-------~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l 143 (260)
T cd05070 75 ----I-------YIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKI 143 (260)
T ss_pred ----c-------EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEe
Confidence 1 1389999999999999653 345788889999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||++..+.....
T Consensus 144 ~dfg~~~~~~~~~~------------------------------------------------------------------ 157 (260)
T cd05070 144 ADFGLARLIEDNEY------------------------------------------------------------------ 157 (260)
T ss_pred CCceeeeeccCccc------------------------------------------------------------------
Confidence 99998865431000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~- 528 (1092)
.......++..|+|||.+.+..++.++|||||||++|||++ +
T Consensus 158 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~ 201 (260)
T cd05070 158 ------------------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGR 201 (260)
T ss_pred ------------------------------------ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCC
Confidence 00001234557999999988889999999999999999997 4
Q ss_pred --CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
|...... .....+.....++.....+..+.+|+.+||.++|++|||+++++.
T Consensus 202 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 202 VPYPGMNNR-EVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred CCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 4332222 222233333333444556788899999999999999999998874
No 373
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.93 E-value=5.6e-26 Score=252.31 Aligned_cols=243 Identities=14% Similarity=0.050 Sum_probs=162.4
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..+|.|+||+|...+... ...++.|...............++..++...+|||++.++.........+
T Consensus 4 g~G~~g~Vy~~~~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~---------- 71 (269)
T cd05087 4 GNGWFGKVILGEVNSGYT--PAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYL---------- 71 (269)
T ss_pred cccCCceEEEEEEcCCCC--ceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcE----------
Confidence 346789999997533221 12233333222222222234455667788889999997655433222111
Q ss_pred cccCCCcccccCCCCCHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARG----HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~----~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg 374 (1092)
.+|||+.|++|.++|.... ...+...++.++.|++.||+|||++||+||||||+||+++.++.+|++|||
T Consensus 72 ------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg 145 (269)
T cd05087 72 ------LVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYG 145 (269)
T ss_pred ------EEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCcc
Confidence 3899999999999996532 234566778899999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++.......
T Consensus 146 ~~~~~~~~~~---------------------------------------------------------------------- 155 (269)
T cd05087 146 LSHNKYKEDY---------------------------------------------------------------------- 155 (269)
T ss_pred ccccccCcce----------------------------------------------------------------------
Confidence 8754321000
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-------CCCccccchhhhHHHHHHcC
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-------VCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-------~~t~~sDIwSLGvll~ell~ 527 (1092)
........|+..|+|||++.+. .++.++|||||||++|||++
T Consensus 156 -------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~ 204 (269)
T cd05087 156 -------------------------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFE 204 (269)
T ss_pred -------------------------------eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHh
Confidence 0000123567789999998642 35789999999999999985
Q ss_pred -C---CCcHHHHHHHHHhccc---cCCCCC-CCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 528 -R---FDSERALAAAMSDLRD---RILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 528 -~---f~~~~~~~~~~~~~~~---~~~p~~-~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
+ |............... ....|. ....++.+.+++..|+ .+|.+|||+.||+.
T Consensus 205 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 205 LGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred CCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 4 4332222221111111 111222 2245677889999998 68999999999985
No 374
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.93 E-value=1.1e-23 Score=252.49 Aligned_cols=324 Identities=13% Similarity=0.190 Sum_probs=212.0
Q ss_pred ceEEeeEEeeeecCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCC
Q 001366 764 FEVQGMLRTGEFNNSANVICSISFDRDE-DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKN 842 (1092)
Q Consensus 764 ~~~~~~l~~~~l~~h~~~V~sl~fspdg-~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~ 842 (1092)
|.+.|.+..+ +..|+..|..++.++.. .+|+|||.||+|+||+......+...........-..+.+.++...+. ++
T Consensus 1034 W~p~G~lVAh-L~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~-~~ 1111 (1431)
T KOG1240|consen 1034 WNPRGILVAH-LHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGN-GD 1111 (1431)
T ss_pred CCccceEeeh-hhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccC-CC
Confidence 4555655543 56788888888887654 999999999999999987643322222222222226788999988886 88
Q ss_pred EEEEEECCCcEEEEECCCC-------ceEEEeeccC--ccEEEEEEecCCCC-EEEEEeCCCcEEEEecCCCceeeeEec
Q 001366 843 YLASADYDGVVKLWDACTG-------QTVSHYIEHE--KRAWSVDFSQVHPT-KLASGSDDCSVKLWNINEKNSLATIKN 912 (1092)
Q Consensus 843 ~LaSgs~DgtV~IWD~~tg-------~~i~~l~~h~--~~V~sv~fsp~~~~-~laSgs~Dg~I~iWDl~~~~~l~~l~~ 912 (1092)
.+|.++.||.|++.+++-- .+.+....+. .-|..-+|...... .++.+..-+.|..||++....++++++
T Consensus 1112 ~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~ 1191 (1431)
T KOG1240|consen 1112 QFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKN 1191 (1431)
T ss_pred eEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhc
Confidence 9999999999999998752 1222222222 22344444443445 677788889999999999988888874
Q ss_pred ---CCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc--CC--CEEEE-EE-CCCeEEEE
Q 001366 913 ---IANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL--DS--GTLVT-AS-TDNKLKLW 983 (1092)
Q Consensus 913 ---~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs--~~--~~L~S-gs-~Dg~I~vW 983 (1092)
.+.|++++.+|.+. +++.|+..|.+.+||+|=.......-.++..++..|..+ .+ ...++ ++ ..+.|.+|
T Consensus 1192 ~~~hG~vTSi~idp~~~-WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~w 1270 (1431)
T KOG1240|consen 1192 QLRHGLVTSIVIDPWCN-WLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTW 1270 (1431)
T ss_pred CccccceeEEEecCCce-EEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeee
Confidence 57799999999995 999999999999999996544333334566788877765 23 34444 44 57789999
Q ss_pred EcCCCCCCCC---CCCceeEEEc--------CCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCcee-eeecccc--
Q 001366 984 DLKRTSHTGP---STNACSLTFS--------GHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPIT-SYKFGSI-- 1049 (1092)
Q Consensus 984 Dl~~~~~~~~---~~~~~~~~l~--------~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~-~~~~~~~-- 1049 (1092)
++.++..... .......... .+.-.....++.--+.++.+|+.|..|+.||...+.... .+.-++.
T Consensus 1271 n~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~ 1350 (1431)
T KOG1240|consen 1271 NMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSY 1350 (1431)
T ss_pred ecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccc
Confidence 9986431100 0000000000 122223344455556799999999999999987665441 1110000
Q ss_pred ---------CCCCC----------------------------c--cccCCCCCCEEEEEEeC-CCCEEEEEecCCeEEEE
Q 001366 1050 ---------DPISG----------------------------K--ETDDDNGLFVSSVCWRR-RSDMVVAANSSGCIKVL 1089 (1092)
Q Consensus 1050 ---------~~i~~----------------------------~--~~~~~h~~~V~sva~sp-d~~~Lasgs~DG~V~vW 1089 (1092)
..+.+ . .....|-..|+++++-. +..+|++++.||.|+||
T Consensus 1351 ~~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiW 1430 (1431)
T KOG1240|consen 1351 STNSESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIW 1430 (1431)
T ss_pred cccchhccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeec
Confidence 00000 0 01123677888888665 35689999999999999
Q ss_pred E
Q 001366 1090 Q 1090 (1092)
Q Consensus 1090 ~ 1090 (1092)
.
T Consensus 1431 k 1431 (1431)
T KOG1240|consen 1431 K 1431 (1431)
T ss_pred C
Confidence 5
No 375
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.93 E-value=4.2e-26 Score=253.02 Aligned_cols=243 Identities=13% Similarity=0.116 Sum_probs=167.4
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
++.|+||+|..... ...+..++.|................+...+...+|||++........+...+
T Consensus 15 g~~g~v~~~~~~~~-~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~------------ 81 (267)
T cd05066 15 GEFGEVCSGRLKLP-GKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM------------ 81 (267)
T ss_pred cCCCceEEEEEecC-CCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE------------
Confidence 46789999865210 00112333333321111222223344556677789999998655543222222
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
.+|||++|++|.+++......++..+++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++...
T Consensus 82 ----lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 82 ----IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred ----EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 3799999999999998766667888999999999999999999999999999999999999999999999887643
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
.....
T Consensus 158 ~~~~~--------------------------------------------------------------------------- 162 (267)
T cd05066 158 DDPEA--------------------------------------------------------------------------- 162 (267)
T ss_pred cccce---------------------------------------------------------------------------
Confidence 10000
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-CCCc---HHHHH
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-RFDS---ERALA 536 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~f~~---~~~~~ 536 (1092)
........++..|+|||.+.+..++.++|+|||||++|||++ +..+ .....
T Consensus 163 -------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~ 217 (267)
T cd05066 163 -------------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD 217 (267)
T ss_pred -------------------------eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH
Confidence 000001223457999999998889999999999999999885 5222 11111
Q ss_pred HHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 537 AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 537 ~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
....+.....++.....++.+.+|+.+||+++|.+||++.++++
T Consensus 218 -~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 218 -VIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred -HHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 22222222223344456788999999999999999999999986
No 376
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.93 E-value=4.3e-26 Score=253.54 Aligned_cols=239 Identities=16% Similarity=0.082 Sum_probs=164.0
Q ss_pred hccccceeeeCCCCCcccccccc--ccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGM--IDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
..+|.|.||+|...+ .+.. ++.|.............-..+...+... .|||++.+++....+...+
T Consensus 4 g~g~~g~v~~~~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~------- 72 (270)
T cd05047 4 GEGNFGQVLKARIKK----DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY------- 72 (270)
T ss_pred CCCCCceEEEEEEcC----CCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCce-------
Confidence 346889999998633 1221 2233322111111222233444555556 8999998766544333222
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCe
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSF 360 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Ni 360 (1092)
.+|||+.+++|.++|.... ..++..+++.++.||+.||+|||++||+||||||+||
T Consensus 73 ---------lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~ni 143 (270)
T cd05047 73 ---------LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNI 143 (270)
T ss_pred ---------EEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceE
Confidence 3899999999999996542 2366778999999999999999999999999999999
Q ss_pred EEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccc
Q 001366 361 KLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIET 440 (1092)
Q Consensus 361 ll~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1092)
+++.++.+|++|||+++......
T Consensus 144 li~~~~~~kl~dfgl~~~~~~~~--------------------------------------------------------- 166 (270)
T cd05047 144 LVGENYVAKIADFGLSRGQEVYV--------------------------------------------------------- 166 (270)
T ss_pred EEcCCCeEEECCCCCccccchhh---------------------------------------------------------
Confidence 99999999999999875311000
Q ss_pred cCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhH
Q 001366 441 ANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGV 520 (1092)
Q Consensus 441 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGv 520 (1092)
.. .....+..|+|||.+.+..++.++|||||||
T Consensus 167 ---------------------------------------------~~--~~~~~~~~y~apE~~~~~~~~~~~Di~slG~ 199 (270)
T cd05047 167 ---------------------------------------------KK--TMGRLPVRWMAIESLNYSVYTTNSDVWSYGV 199 (270)
T ss_pred ---------------------------------------------hc--cCCCCccccCChHHHccCCCCchhhHHHHHH
Confidence 00 0111244699999998888999999999999
Q ss_pred HHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 521 LFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 521 ll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
++|||++ + |.... .......+.....++.....++.+.+|+.+||+.+|.+||++.+++..
T Consensus 200 il~el~~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (270)
T cd05047 200 LLWEIVSLGGTPYCGMT-CAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 264 (270)
T ss_pred HHHHHHcCCCCCccccC-HHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 9999996 4 32221 112222222222222333456788999999999999999999999874
No 377
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.93 E-value=2.3e-26 Score=256.61 Aligned_cols=241 Identities=17% Similarity=0.224 Sum_probs=172.2
Q ss_pred cccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
++.|.||++.... .+..++.|...... ..........+...+...+|++++.+......+...+
T Consensus 10 g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~----------- 74 (283)
T cd05118 10 GTYGVVYKARDKL----TGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLY----------- 74 (283)
T ss_pred CCCceEEEEEcCC----CCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEE-----------
Confidence 4679999987632 23444554432221 1122333444556677778999998766654332222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
+++||+++ +|.+++......++..+++.++.||+.||.|||++||+|+||||+||+++.++.+|++|||.+...
T Consensus 75 -----~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~ 148 (283)
T cd05118 75 -----LVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSF 148 (283)
T ss_pred -----EEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEec
Confidence 37889876 999999776567888899999999999999999999999999999999999999999999987664
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
....
T Consensus 149 ~~~~---------------------------------------------------------------------------- 152 (283)
T cd05118 149 GSPV---------------------------------------------------------------------------- 152 (283)
T ss_pred CCCc----------------------------------------------------------------------------
Confidence 3100
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
.......++.+|+|||.+.+. .++.++|||||||++|+|+++ |+.....
T Consensus 153 ---------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~ 205 (283)
T cd05118 153 ---------------------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI 205 (283)
T ss_pred ---------------------------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 001134577889999999876 789999999999999999986 4333322
Q ss_pred HHHHHhccc--cC--------------------------CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 536 AAAMSDLRD--RI--------------------------LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 536 ~~~~~~~~~--~~--------------------------~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
......... .. .+......++++.+|+.+||++||.+||++.+++.||||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 206 DQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred HHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 221111110 00 001122346788999999999999999999999999997
No 378
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93 E-value=4.2e-26 Score=256.08 Aligned_cols=246 Identities=20% Similarity=0.191 Sum_probs=173.6
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.++.|.||++...+ .+..++.|++...........-.++...+....|||++.++........ ...+
T Consensus 11 ~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-------~~~~-- 77 (287)
T cd06621 11 EGAGGSVTKCRLKN----TGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESS-------SSIG-- 77 (287)
T ss_pred cCCceEEEEEEECC----CCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCC-------CeEE--
Confidence 45679999998743 2455555555332222233444556667888899999976543321110 0011
Q ss_pred ccCCCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
.+|||++|++|.+++.. ....++...+..++.||+.||.|||++|++|+||+|+||+++.++.++++|||++
T Consensus 78 -----lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~ 152 (287)
T cd06621 78 -----IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVS 152 (287)
T ss_pred -----EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccc
Confidence 37999999999998753 3445777789999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
.......
T Consensus 153 ~~~~~~~------------------------------------------------------------------------- 159 (287)
T cd06621 153 GELVNSL------------------------------------------------------------------------- 159 (287)
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 6533100
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
.....++..|+|||.+.+..++.++|||||||++|||+++ |....
T Consensus 160 --------------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 207 (287)
T cd06621 160 --------------------------------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEG 207 (287)
T ss_pred --------------------------------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCccc
Confidence 0022456779999999988999999999999999999986 32220
Q ss_pred ----HHHHHHHhccc---cCCCCCC---CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 534 ----ALAAAMSDLRD---RILPPSF---LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 534 ----~~~~~~~~~~~---~~~p~~~---~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
........+.. ..++... ...++.+.+|+.+||+++|++|||+.|+++||||...
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 272 (287)
T cd06621 208 EPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ 272 (287)
T ss_pred CCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence 11111121111 1111111 1234678899999999999999999999999999543
No 379
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.93 E-value=6.5e-26 Score=251.89 Aligned_cols=242 Identities=14% Similarity=0.062 Sum_probs=161.8
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.++.|.||+|...+.... ...+.+.+...........-.++...++..+|||++.++.........+
T Consensus 5 ~G~~g~v~~~~~~~~~~~--~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~----------- 71 (268)
T cd05086 5 NGWFGKVLLSEIYTDTGV--ARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYL----------- 71 (268)
T ss_pred CCcCceEEEEEEEcCCCc--ceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccE-----------
Confidence 467899999864321111 1122222211112222344455556677889999998776644332222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARG---HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~---~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
.+|||++|++|.+++.... .......++.++.||+.||+|||++||+||||||+|||++.++.+|++|||++
T Consensus 72 -----lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~ 146 (268)
T cd05086 72 -----LVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIG 146 (268)
T ss_pred -----EEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccc
Confidence 3899999999999997542 23455567899999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
........
T Consensus 147 ~~~~~~~~------------------------------------------------------------------------ 154 (268)
T cd05086 147 PSRYKEDY------------------------------------------------------------------------ 154 (268)
T ss_pred cccCcchh------------------------------------------------------------------------
Confidence 53220000
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-------CCCCccccchhhhHHHHHHcCC-
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-------GVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-------~~~t~~sDIwSLGvll~ell~~- 528 (1092)
........|+..|+|||++.. ..++.++|||||||++|||+++
T Consensus 155 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~ 205 (268)
T cd05086 155 -----------------------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENA 205 (268)
T ss_pred -----------------------------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCC
Confidence 000013456788999999753 2457899999999999999852
Q ss_pred ---CCcHHHHHHHHHhcccc---CCCCC-CCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 529 ---FDSERALAAAMSDLRDR---ILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~---~~p~~-~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
|............++.. ...|. ....++.+.+++..|+ .+|.+||++++|++
T Consensus 206 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 206 AQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred CCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 43333322222222221 12222 2345678889999999 67999999999976
No 380
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.93 E-value=5.8e-26 Score=251.45 Aligned_cols=241 Identities=15% Similarity=0.079 Sum_probs=169.7
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||+|...+ ...++.|+...... ....-.++...+....|||++.+..... ...
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~~-----~~~valK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~----- 74 (262)
T cd05071 8 LRLEVKLGQGCFGEVWMGTWNG-----TTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEP----- 74 (262)
T ss_pred eeEeeecCCCCCCcEEEEEecC-----CceEEEEecccCcc--CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCC-----
Confidence 3344444 4679999997643 22355555433222 1122344556777788999987654321 111
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
.+ .+|+|+.|++|.+++... +..++...++.++.|++.||+|+|++||+||||||+||+++.++.+|+
T Consensus 75 ----~~-------lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L 143 (262)
T cd05071 75 ----IY-------IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 143 (262)
T ss_pred ----cE-------EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEe
Confidence 11 389999999999999753 345777789999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||.++.+.....
T Consensus 144 ~dfg~~~~~~~~~~------------------------------------------------------------------ 157 (262)
T cd05071 144 ADFGLARLIEDNEY------------------------------------------------------------------ 157 (262)
T ss_pred ccCCceeecccccc------------------------------------------------------------------
Confidence 99998865431000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~- 528 (1092)
.......++..|+|||.+.+..++.++|||||||++|||++ +
T Consensus 158 ------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~ 201 (262)
T cd05071 158 ------------------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 201 (262)
T ss_pred ------------------------------------ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCC
Confidence 00002235667999999988889999999999999999998 3
Q ss_pred --CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
|........ +..+.....++.....++.+.+|+.+||+++|.+||++.++++
T Consensus 202 ~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 202 VPYPGMVNREV-LDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred CCCCCCChHHH-HHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 433322222 2222222222333455788999999999999999999999876
No 381
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.93 E-value=4.8e-26 Score=254.42 Aligned_cols=242 Identities=17% Similarity=0.175 Sum_probs=170.3
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCC-CCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNA-SPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..+|.|.||+|...+ .+..++.|...............++...+...+ |||++.++.....+...+
T Consensus 8 g~g~~g~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~--------- 74 (283)
T cd07830 8 GDGTFGSVYLARNKE----TGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELY--------- 74 (283)
T ss_pred ccCCceEEEEEEECC----CCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEE---------
Confidence 345789999998743 133344443322222222333444555666667 999998766544333222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
.+|+|+ +++|.+++.... ..++..+++.++.||+.+|.|||++||+|+||||+||+++.++.++++|||++
T Consensus 75 -------lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~ 146 (283)
T cd07830 75 -------FVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLA 146 (283)
T ss_pred -------EEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccc
Confidence 389999 889999997654 56788899999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+......
T Consensus 147 ~~~~~~~------------------------------------------------------------------------- 153 (283)
T cd07830 147 REIRSRP------------------------------------------------------------------------- 153 (283)
T ss_pred eeccCCC-------------------------------------------------------------------------
Confidence 6533100
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
..+...++..|+|||.+.. ..++.++|+|||||++|||+++ |+..
T Consensus 154 -------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~ 202 (283)
T cd07830 154 -------------------------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGS 202 (283)
T ss_pred -------------------------------CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCC
Confidence 0113457888999998865 4579999999999999999986 3332
Q ss_pred HHHHHHHHhcc--------------------ccCCC--------CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001366 533 RALAAAMSDLR--------------------DRILP--------PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1092)
Q Consensus 533 ~~~~~~~~~~~--------------------~~~~p--------~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~ 584 (1092)
........... ....+ ..+...++.+.+|+.+||+.+|.+||++.|++.|||
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~ 282 (283)
T cd07830 203 SEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY 282 (283)
T ss_pred ChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCC
Confidence 22211111100 00001 112233577899999999999999999999999999
Q ss_pred h
Q 001366 585 T 585 (1092)
Q Consensus 585 ~ 585 (1092)
|
T Consensus 283 ~ 283 (283)
T cd07830 283 F 283 (283)
T ss_pred C
Confidence 7
No 382
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.93 E-value=2.7e-26 Score=256.63 Aligned_cols=242 Identities=17% Similarity=0.190 Sum_probs=168.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCch-hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.++.|.||+|.... .+..++.|+........ .......+...+...+||+++.+......+...+
T Consensus 9 ~g~~~~vy~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~---------- 74 (283)
T cd07835 9 EGTYGVVYKARDKL----TGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLY---------- 74 (283)
T ss_pred CCCCeEEEEEEEcC----CCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEE----------
Confidence 34679999997532 23444554442221111 1122334556677788999998766543222222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++|+|+. ++|.+++.... ..++...++.++.||+.||+|||++|++||||+|+||+++.++.++++|||+++
T Consensus 75 ------iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~ 147 (283)
T cd07835 75 ------LVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLAR 147 (283)
T ss_pred ------EEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence 3788885 69999996654 457888999999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+...
T Consensus 148 ~~~~~--------------------------------------------------------------------------- 152 (283)
T cd07835 148 AFGVP--------------------------------------------------------------------------- 152 (283)
T ss_pred ccCCC---------------------------------------------------------------------------
Confidence 53210
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
........++..|+|||.+.+. .++.++|||||||++|||+++ |....
T Consensus 153 ----------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 204 (283)
T cd07835 153 ----------------------------VRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDS 204 (283)
T ss_pred ----------------------------ccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 0001123467889999988764 578999999999999999996 43332
Q ss_pred HHHHHHHhccc---------------------------cCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 534 ALAAAMSDLRD---------------------------RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 534 ~~~~~~~~~~~---------------------------~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
.........+. ..........++.+.+|+.+||+++|.+||++.|+++||||
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 205 EIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred HHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 22221111110 00011123445778999999999999999999999999997
No 383
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.93 E-value=1.9e-26 Score=254.17 Aligned_cols=239 Identities=15% Similarity=0.120 Sum_probs=175.0
Q ss_pred cccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
+|.|.||++... ..+..++.|+..-.... .......++...++..+|||++.++.........+
T Consensus 11 g~~~~v~~~~~~----~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~---------- 76 (258)
T cd05578 11 GAFGKVCIVQKR----DTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMY---------- 76 (258)
T ss_pred CCCceEEEEEEc----cCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEE----------
Confidence 477899998763 23455555554322211 12334455566788889999998665543322222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
++++|+.|++|.+++... ..++..+++.++.||++||.|||++||+|+||||+||+++.++.++++|||++..
T Consensus 77 ------lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~ 149 (258)
T cd05578 77 ------LVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATK 149 (258)
T ss_pred ------EEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccc
Confidence 379999999999999776 4577779999999999999999999999999999999999999999999998765
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.....
T Consensus 150 ~~~~~--------------------------------------------------------------------------- 154 (258)
T cd05578 150 VTPDT--------------------------------------------------------------------------- 154 (258)
T ss_pred cCCCc---------------------------------------------------------------------------
Confidence 33100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH-
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA- 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~- 534 (1092)
......|+..|+|||.+.+..++.++|+|||||++|+|++| |.....
T Consensus 155 -----------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 205 (258)
T cd05578 155 -----------------------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT 205 (258)
T ss_pred -----------------------------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc
Confidence 00123467789999999988899999999999999999986 332221
Q ss_pred -HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH--HHHhhhhhh
Q 001366 535 -LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT--REILQSEVT 585 (1092)
Q Consensus 535 -~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa--~eiL~~~~~ 585 (1092)
.......... ..+......++.+.+|+.+||..+|.+||++ .|++.||||
T Consensus 206 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 206 IRDQIRAKQET-ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHHHHHHHhcc-ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 2222222221 1222223346889999999999999999999 999999997
No 384
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.93 E-value=3.5e-26 Score=252.38 Aligned_cols=246 Identities=19% Similarity=0.201 Sum_probs=170.0
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..+|.|.||++.....-....-.+..++...............+..+++..+|||++.+.......... +
T Consensus 9 g~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~---------~- 78 (260)
T cd08222 9 GKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAF---------C- 78 (260)
T ss_pred cCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCce---------E-
Confidence 345789999886532100000001111111111122222333455677788999998765543322211 1
Q ss_pred cccCCCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
.++||+.|++|.+++.. .+..++..+++.++.|++.||+|||++||+|+||||+||+++ ++.+|++|||+
T Consensus 79 ------lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~-~~~~~l~d~g~ 151 (260)
T cd08222 79 ------IITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK-NNLLKIGDFGV 151 (260)
T ss_pred ------EEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee-cCCEeecccCc
Confidence 37999999999999853 345688889999999999999999999999999999999996 47799999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++.......
T Consensus 152 ~~~~~~~~~----------------------------------------------------------------------- 160 (260)
T cd08222 152 SRLLMGSCD----------------------------------------------------------------------- 160 (260)
T ss_pred eeecCCCcc-----------------------------------------------------------------------
Confidence 866431000
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcH
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
......|++.|+|||.+.+..++.++|+||||+++|+|+++ |...
T Consensus 161 --------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~ 208 (260)
T cd08222 161 --------------------------------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ 208 (260)
T ss_pred --------------------------------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 00023467789999999888889999999999999999985 4433
Q ss_pred HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 533 RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 533 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
..... ...+.....|......++.+.+++.+||..+|++||++.++++||||
T Consensus 209 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 209 NFLSV-VLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred cHHHH-HHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 33322 22233333333334456788999999999999999999999999997
No 385
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.93 E-value=5.1e-26 Score=256.32 Aligned_cols=248 Identities=19% Similarity=0.227 Sum_probs=178.6
Q ss_pred HhhhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCC
Q 001366 216 VKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 216 ~~~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
.+...++.|.||++.... .+..++.|... ............+...+...+|+|++...+....+...+
T Consensus 26 ~~lg~g~~g~v~~~~~~~----~~~~v~iK~~~-~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~------- 93 (292)
T cd06657 26 IKIGEGSTGIVCIATVKS----SGKLVAVKKMD-LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELW------- 93 (292)
T ss_pred HHcCCCCCeEEEEEEEcC----CCeEEEEEEec-ccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEE-------
Confidence 456667789999986622 24445554331 111122233344555677888999998766544322222
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
++|||+.|++|.+++... .++...++.++.||+.+|.|||++||+|+||||+||+++.++.++++|||+
T Consensus 94 ---------lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~ 162 (292)
T cd06657 94 ---------VVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 162 (292)
T ss_pred ---------EEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEccccc
Confidence 389999999999988643 467778999999999999999999999999999999999999999999997
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
+.......
T Consensus 163 ~~~~~~~~------------------------------------------------------------------------ 170 (292)
T cd06657 163 CAQVSKEV------------------------------------------------------------------------ 170 (292)
T ss_pred ceeccccc------------------------------------------------------------------------
Confidence 75432100
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcH
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
.......|+..|+|||.+.+..++.++|+|||||++|||+++ |...
T Consensus 171 -------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~ 219 (292)
T cd06657 171 -------------------------------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 219 (292)
T ss_pred -------------------------------ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 000134578889999999888899999999999999999986 3332
Q ss_pred HHHHHHHHhccccCCCC---CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhcc
Q 001366 533 RALAAAMSDLRDRILPP---SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1092)
Q Consensus 533 ~~~~~~~~~~~~~~~p~---~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~~ 591 (1092)
... .....+.. .+|+ .....++.+.+|+.+||..+|.+||++.++|+||||.....+
T Consensus 220 ~~~-~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~ 279 (292)
T cd06657 220 PPL-KAMKMIRD-NLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 279 (292)
T ss_pred CHH-HHHHHHHh-hCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCC
Confidence 221 11112211 1222 233457889999999999999999999999999999876543
No 386
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.93 E-value=2.6e-26 Score=258.51 Aligned_cols=246 Identities=18% Similarity=0.220 Sum_probs=170.3
Q ss_pred cccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
++.|.||+|.... .+..++.|........ ........+...+...+|||++.+......+...+
T Consensus 13 g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~----------- 77 (294)
T PLN00009 13 GTYGVVYKARDRV----TNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLY----------- 77 (294)
T ss_pred CCCEEEEEEEecC----CCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEE-----------
Confidence 3679999998632 2344555444221111 11123345566788889999998776654333222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc-CCcEEEecccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGPIIQK 377 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~-~~~vkl~Dfg~~~ 377 (1092)
.+|||+. ++|.+++.... ...+...+..++.||+.||+|||++||+||||||+||+++. .+.+|++|||+++
T Consensus 78 -----lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~ 151 (294)
T PLN00009 78 -----LVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 151 (294)
T ss_pred -----EEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEccccccc
Confidence 3799986 58888886543 33567788899999999999999999999999999999985 4579999999886
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.....
T Consensus 152 ~~~~~--------------------------------------------------------------------------- 156 (294)
T PLN00009 152 AFGIP--------------------------------------------------------------------------- 156 (294)
T ss_pred ccCCC---------------------------------------------------------------------------
Confidence 53310
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
....+...+++.|+|||.+.+ ..++.++|||||||++|+|+++ |....
T Consensus 157 ----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~ 208 (294)
T PLN00009 157 ----------------------------VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDS 208 (294)
T ss_pred ----------------------------ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 000113456888999999877 4579999999999999999997 33322
Q ss_pred HHHHHHHhccc--cC--------------------CCC-----CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001366 534 ALAAAMSDLRD--RI--------------------LPP-----SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1092)
Q Consensus 534 ~~~~~~~~~~~--~~--------------------~p~-----~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~ 586 (1092)
........... .. .++ .....++++.+|+.+||+.+|++||++.++|+||||.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~ 288 (294)
T PLN00009 209 EIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFK 288 (294)
T ss_pred HHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHh
Confidence 22222211110 00 000 0124567889999999999999999999999999998
Q ss_pred hhhc
Q 001366 587 EFQE 590 (1092)
Q Consensus 587 ~~~~ 590 (1092)
+.++
T Consensus 289 ~~~~ 292 (294)
T PLN00009 289 DLGD 292 (294)
T ss_pred HHhc
Confidence 8654
No 387
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.93 E-value=5.3e-26 Score=252.42 Aligned_cols=246 Identities=14% Similarity=0.109 Sum_probs=167.8
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+|.|.||+|.....-.. +..++.|+............-..+...++...|||++........+...+
T Consensus 15 g~~g~vy~~~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~------------ 81 (269)
T cd05065 15 GEFGEVCRGRLKLPGKR-EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM------------ 81 (269)
T ss_pred CCCCeEEEEEEecCCCC-ceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE------------
Confidence 46799999886331111 12344444322211222233344556777889999998655533222222
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
.+|||+.|++|.+++......++..+++.++.|++.||+|||++|++||||||+||+++.++.+|++|||+++...
T Consensus 82 ----lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 82 ----IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred ----EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccc
Confidence 3799999999999998766667888999999999999999999999999999999999999999999999886543
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
......
T Consensus 158 ~~~~~~-------------------------------------------------------------------------- 163 (269)
T cd05065 158 DDTSDP-------------------------------------------------------------------------- 163 (269)
T ss_pred cCcccc--------------------------------------------------------------------------
Confidence 100000
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHHH
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALA 536 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~~ 536 (1092)
..........+..|+|||.+.+..++.++|||||||++|||++ + |.......
T Consensus 164 ------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~ 219 (269)
T cd05065 164 ------------------------TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 219 (269)
T ss_pred ------------------------ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH
Confidence 0000001112456999999998899999999999999999885 4 32222211
Q ss_pred HHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 537 AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 537 ~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
....+......+.....++.+.+++.+||.++|.+||++.+|+..
T Consensus 220 -~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 220 -VINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred -HHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 111222211222334556788999999999999999999999863
No 388
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.93 E-value=5.3e-26 Score=251.02 Aligned_cols=246 Identities=19% Similarity=0.169 Sum_probs=173.9
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.++.|.||+|.... .+..++.|+....... ........+...+...+|++++.++.........+
T Consensus 10 ~G~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~---------- 75 (264)
T cd06626 10 GGTFGKVYTAVNLD----TGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVY---------- 75 (264)
T ss_pred cCCCcEEEEEEECC----CCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEE----------
Confidence 35779999987522 1344455444332222 23344445556677889999987666533222222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.++||++|++|.+++...+ .++...++.++.||+.||.|||++||+|+||||+||+++.++.+|++|||++..
T Consensus 76 ------lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~ 148 (264)
T cd06626 76 ------IFMEYCSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVK 148 (264)
T ss_pred ------EEEecCCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccc
Confidence 3799999999999997654 467778999999999999999999999999999999999999999999998876
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.......
T Consensus 149 ~~~~~~~------------------------------------------------------------------------- 155 (264)
T cd06626 149 LKNNTTT------------------------------------------------------------------------- 155 (264)
T ss_pred cCCCCCc-------------------------------------------------------------------------
Confidence 4411000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC---CCccccchhhhHHHHHHcCC---CCcH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV---CTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~---~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
.........++..|+|||.+.+.. ++.++|||||||++|||+++ |...
T Consensus 156 --------------------------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~ 209 (264)
T cd06626 156 --------------------------MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSEL 209 (264)
T ss_pred --------------------------ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCC
Confidence 000011235677899999998866 89999999999999999986 3322
Q ss_pred HHHHHHHHhccccCCC--CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 533 RALAAAMSDLRDRILP--PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 533 ~~~~~~~~~~~~~~~p--~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
.........+.....+ |.....++.+.+|+.+||+.+|.+||++.+++.|||+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 210 DNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred cchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 1222222122222222 2233347888999999999999999999999999996
No 389
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.93 E-value=4.9e-26 Score=254.22 Aligned_cols=245 Identities=14% Similarity=0.133 Sum_probs=172.5
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|+||+|...+.-+..+..++.|+..............++...+....|||++.++.....+.. .+
T Consensus 16 ~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~--------~~--- 84 (280)
T cd05043 16 EGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE--------PP--- 84 (280)
T ss_pred ccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC--------CC---
Confidence 4578999999864311111344445544333233334445566667788899999987665443211 11
Q ss_pred ccCCCcccccCCCCCHHHHHhhcC-------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEec
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARG-------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIG 372 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~-------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~D 372 (1092)
..+++|+.+++|.++|.... ..++..+++.++.||+.||+|||++||+||||||+||+++.++.+|++|
T Consensus 85 ----~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 85 ----FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred ----EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECC
Confidence 13688999999999996532 3577889999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCC
Q 001366 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1092)
Q Consensus 373 fg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 452 (1092)
||+++.+......
T Consensus 161 ~g~~~~~~~~~~~------------------------------------------------------------------- 173 (280)
T cd05043 161 NALSRDLFPMDYH------------------------------------------------------------------- 173 (280)
T ss_pred CCCcccccCCceE-------------------------------------------------------------------
Confidence 9998765411000
Q ss_pred CCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---
Q 001366 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R--- 528 (1092)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~--- 528 (1092)
.......++..|+|||.+.+..++.++|||||||++|||++ +
T Consensus 174 ----------------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p 219 (280)
T cd05043 174 ----------------------------------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTP 219 (280)
T ss_pred ----------------------------------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCC
Confidence 00001123556999999998889999999999999999997 4
Q ss_pred CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 529 FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 529 f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
|...... .....+.....++.....++.+.+++.+||+++|++|||+.++++
T Consensus 220 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 220 YVEIDPF-EMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred cCcCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 4332222 222222222222333345678899999999999999999999986
No 390
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.93 E-value=6.4e-26 Score=253.84 Aligned_cols=249 Identities=15% Similarity=0.080 Sum_probs=169.1
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..+|.|.||++....--...+..++.|.+... .......-.++...+...+|||++............
T Consensus 13 g~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~----------- 80 (284)
T cd05081 13 GKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS-TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR----------- 80 (284)
T ss_pred cCCCCceEEEEEecCCcCCCCcEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC-----------
Confidence 34577999998642111122344555443221 222223334566678888999998765432211000
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
...++|||+.|++|.+++......++...++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++.
T Consensus 81 ---~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 81 ---NLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred ---ceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccc
Confidence 01147999999999999977655678889999999999999999999999999999999999999999999998876
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+......
T Consensus 158 ~~~~~~~------------------------------------------------------------------------- 164 (284)
T cd05081 158 LPQDKEY------------------------------------------------------------------------- 164 (284)
T ss_pred ccCCCcc-------------------------------------------------------------------------
Confidence 4310000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcH----HH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSE----RA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~----~~ 534 (1092)
........++..|+|||.+.+..++.++|||||||++|||+++.... ..
T Consensus 165 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~ 217 (284)
T cd05081 165 ---------------------------YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE 217 (284)
T ss_pred ---------------------------eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh
Confidence 00000111234599999999888999999999999999999852111 00
Q ss_pred HH--------------HHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 535 LA--------------AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 535 ~~--------------~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
.. .....+.....++.....++.+.+|+.+||.++|++|||+.+|++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 218 FMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred hhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 00 0111122222333444567889999999999999999999999874
No 391
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93 E-value=5.9e-26 Score=260.78 Aligned_cols=246 Identities=16% Similarity=0.138 Sum_probs=169.4
Q ss_pred ccccceeeeCCCCCc---cccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCC
Q 001366 220 LKGKGIVCRGPPLNA---FKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
.+|.|.||++..... .......++.|+..............++..++... .|||++.++.....+...+
T Consensus 22 ~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~------- 94 (334)
T cd05100 22 EGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY------- 94 (334)
T ss_pred cccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceE-------
Confidence 346889998853210 01112234444443222222333445566667676 7999998766544333222
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCe
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSF 360 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Ni 360 (1092)
.+|||+.+++|.++|.... ..+...+++.++.||+.||+|||++||+||||||+||
T Consensus 95 ---------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 165 (334)
T cd05100 95 ---------VLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNV 165 (334)
T ss_pred ---------EEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceE
Confidence 3799999999999997532 2356678889999999999999999999999999999
Q ss_pred EEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccc
Q 001366 361 KLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIET 440 (1092)
Q Consensus 361 ll~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1092)
+++.++.+|++|||+++........
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~------------------------------------------------------- 190 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYY------------------------------------------------------- 190 (334)
T ss_pred EEcCCCcEEECCcccceeccccccc-------------------------------------------------------
Confidence 9999999999999988764310000
Q ss_pred cCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhH
Q 001366 441 ANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGV 520 (1092)
Q Consensus 441 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGv 520 (1092)
.......++..|+|||++.+..++.++|||||||
T Consensus 191 ----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 224 (334)
T cd05100 191 ----------------------------------------------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 224 (334)
T ss_pred ----------------------------------------------ccccCCCcCceEcCHHHhccCCcCchhhhHHHHH
Confidence 0000122345699999999989999999999999
Q ss_pred HHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 521 LFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 521 ll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
+||||++ + |... ........+.....++.....+..+.+|+.+||+.+|.+||++.+++++.
T Consensus 225 il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l 290 (334)
T cd05100 225 LLWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDL 290 (334)
T ss_pred HHHHHHhcCCCCCCCC-CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 9999997 3 3322 22223333333333333445577889999999999999999999998853
No 392
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.93 E-value=5.3e-26 Score=255.93 Aligned_cols=252 Identities=13% Similarity=0.068 Sum_probs=170.7
Q ss_pred HHHhhhcc--ccceeeeCCCCCc------------cccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCcccc
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNA------------FKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGT 279 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (1092)
|.+.+.++ |.|.||++...+. .......++.|+............-.++...+...+|||++.+..
T Consensus 7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 86 (296)
T cd05051 7 LNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLG 86 (296)
T ss_pred CcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 44444443 6789998765320 001122334444433222223333445666778889999988665
Q ss_pred ceecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC----------CCCCHHHHHHHHHHHHHHHHHhhhcC
Q 001366 280 AVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG----------HKGKRIECLYIFRQIVALVDYHHTQG 349 (1092)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~----------~~~~~~~~~~i~~qil~~l~~lHs~g 349 (1092)
....+.... .+|||+.|++|.++|.... ..++...++.++.||+.||+|||++|
T Consensus 87 ~~~~~~~~~----------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~ 150 (296)
T cd05051 87 VCTVDPPLC----------------MIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN 150 (296)
T ss_pred EEecCCCcE----------------EEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 544332222 3799999999999996654 25778889999999999999999999
Q ss_pred ccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCccccccccc
Q 001366 350 VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSL 429 (1092)
Q Consensus 350 IvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (1092)
|+||||||+||+++.++.++++|||+++.+......
T Consensus 151 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------------- 186 (296)
T cd05051 151 FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYY-------------------------------------------- 186 (296)
T ss_pred ccccccchhceeecCCCceEEccccceeecccCcce--------------------------------------------
Confidence 999999999999999999999999988654310000
Q ss_pred ccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC
Q 001366 430 FPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC 509 (1092)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~ 509 (1092)
.......++..|+|||.+.+..+
T Consensus 187 ---------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~ 209 (296)
T cd05051 187 ---------------------------------------------------------RVQGRAPLPIRWMAWESVLLGKF 209 (296)
T ss_pred ---------------------------------------------------------eecCcCCCCceecCHHHhhcCCC
Confidence 00002345677999999998889
Q ss_pred CccccchhhhHHHHHHcCC-----CCcHHHHHHHHH--hc----cccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001366 510 TTSSNIYSLGVLFFELFGR-----FDSERALAAAMS--DL----RDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1092)
Q Consensus 510 t~~sDIwSLGvll~ell~~-----f~~~~~~~~~~~--~~----~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~e 578 (1092)
+.++|||||||++|||++. |........... .. ......+.....++++.+|+.+||.++|.+|||+.+
T Consensus 210 ~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~e 289 (296)
T cd05051 210 TTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFRE 289 (296)
T ss_pred CccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHH
Confidence 9999999999999999862 222111111111 11 111112222334578899999999999999999999
Q ss_pred Hhhh
Q 001366 579 ILQS 582 (1092)
Q Consensus 579 iL~~ 582 (1092)
|++.
T Consensus 290 l~~~ 293 (296)
T cd05051 290 IHLF 293 (296)
T ss_pred HHHH
Confidence 9763
No 393
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.93 E-value=4.5e-27 Score=255.39 Aligned_cols=196 Identities=17% Similarity=0.216 Sum_probs=142.5
Q ss_pred cccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccccccccC
Q 001366 307 GSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASL 385 (1092)
Q Consensus 307 ~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~ 385 (1092)
.-...|.++.++|+..+ ..++-..++.+.+||+++|.|||+.+++|-||||+|||+..+..++.-.-+...
T Consensus 169 vfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~-------- 240 (415)
T KOG0671|consen 169 VFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKV-------- 240 (415)
T ss_pred EEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCcc--------
Confidence 55667889999998754 457777899999999999999999999999999999999877766653332210
Q ss_pred CCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccC
Q 001366 386 DIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNA 465 (1092)
Q Consensus 386 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 465 (1092)
+..+.......++=|||.++-+....
T Consensus 241 ------------------------------------------------~~~r~~ks~~I~vIDFGsAtf~~e~h------ 266 (415)
T KOG0671|consen 241 ------------------------------------------------CFIRPLKSTAIKVIDFGSATFDHEHH------ 266 (415)
T ss_pred ------------------------------------------------ceeccCCCcceEEEecCCcceeccCc------
Confidence 00011111234456677554332111
Q ss_pred CCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH--HHHHHHH
Q 001366 466 GFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER--ALAAAMS 540 (1092)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~--~~~~~~~ 540 (1092)
+..+.|+.|+|||++.|..++.++||||+||||+||.+| |.+.+ ++-+.|.
T Consensus 267 ------------------------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMe 322 (415)
T KOG0671|consen 267 ------------------------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMME 322 (415)
T ss_pred ------------------------ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHH
Confidence 256889999999999999999999999999999999998 54443 4445555
Q ss_pred hccccCCCCC----------------------------------------CCCCC---hhHHHHHHhccccCCCCCCCHH
Q 001366 541 DLRDRILPPS----------------------------------------FLSEN---PKEAGFCLWQLHPEPLSRPTTR 577 (1092)
Q Consensus 541 ~~~~~~~p~~----------------------------------------~~~~~---~~~~~li~~lL~~dP~~Rpsa~ 577 (1092)
.+.+ ++|.. ....+ ..+.+|+.+||.+||.+|+|++
T Consensus 323 rIlG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~ 401 (415)
T KOG0671|consen 323 RILG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLR 401 (415)
T ss_pred HhhC-CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHH
Confidence 4444 22211 01111 2367999999999999999999
Q ss_pred HHhhhhhhhhhh
Q 001366 578 EILQSEVTNEFQ 589 (1092)
Q Consensus 578 eiL~~~~~~~~~ 589 (1092)
|+|.||||+...
T Consensus 402 EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 402 EALSHPFFARLT 413 (415)
T ss_pred HHhcCHHhhcCC
Confidence 999999998653
No 394
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.93 E-value=2.1e-25 Score=254.30 Aligned_cols=247 Identities=15% Similarity=0.110 Sum_probs=176.4
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCch--hhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS--DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
|...+.++ +.|.||++...+ .+..++.|++....... ....-..+...+...+|||++........+...+
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~----~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~- 101 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVR----TNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAW- 101 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcC----CCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEE-
Confidence 44444443 679999987632 24455555543222211 2223344566777889999987666544332222
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
.+|+|+.| +|.+++......++..++..++.||+.||.|||++||+||||||+||+++.++.+|
T Consensus 102 ---------------lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~k 165 (317)
T cd06635 102 ---------------LVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVK 165 (317)
T ss_pred ---------------EEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEE
Confidence 37999975 78888876666788889999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
++|||++.....
T Consensus 166 l~dfg~~~~~~~-------------------------------------------------------------------- 177 (317)
T cd06635 166 LADFGSASIASP-------------------------------------------------------------------- 177 (317)
T ss_pred EecCCCccccCC--------------------------------------------------------------------
Confidence 999997654220
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc---CCCCCccccchhhhHHHHHHc
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS---GGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~t~~sDIwSLGvll~ell 526 (1092)
.....|+..|+|||.+. .+.++.++|||||||++|||+
T Consensus 178 ---------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~ 218 (317)
T cd06635 178 ---------------------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 218 (317)
T ss_pred ---------------------------------------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHH
Confidence 00235677899999984 356899999999999999999
Q ss_pred CCCC---cHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 527 GRFD---SERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 527 ~~f~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
++.. .................+......++.+.+|+.+||+.+|.+||++.++++|+|+...
T Consensus 219 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 219 ERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred hCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 8632 2222222222222222222333456788999999999999999999999999998653
No 395
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.93 E-value=3.4e-26 Score=263.84 Aligned_cols=250 Identities=17% Similarity=0.219 Sum_probs=173.4
Q ss_pred ccccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.++.|.||+|.... .+..++.|+..... .........++...++...|||++.+......+.... .
T Consensus 25 ~g~~g~vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~----~----- 91 (343)
T cd07851 25 SGAYGQVCSAFDTK----TGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLE----D----- 91 (343)
T ss_pred cCCceEEEEEEECC----CCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccc----c-----
Confidence 34789999998732 24455555442211 1222233345666788889999987655433222100 0
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
+.....+++|+ |++|.+++... .++..+++.++.||+.||+|||++||+||||||+||+++.++.+|++|||++..
T Consensus 92 -~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (343)
T cd07851 92 -FQDVYLVTHLM-GADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARH 167 (343)
T ss_pred -cccEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccc
Confidence 00011356666 77999999763 578889999999999999999999999999999999999999999999998765
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
....
T Consensus 168 ~~~~---------------------------------------------------------------------------- 171 (343)
T cd07851 168 TDDE---------------------------------------------------------------------------- 171 (343)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 3200
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
.....++.+|+|||.+.+ ..++.++|||||||++|||+++ |.....
T Consensus 172 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~ 221 (343)
T cd07851 172 ------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH 221 (343)
T ss_pred ------------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 013356788999999876 4678999999999999999986 433322
Q ss_pred HHHHHHhccccC-----------------------------CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 535 LAAAMSDLRDRI-----------------------------LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 535 ~~~~~~~~~~~~-----------------------------~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
.......+.... ++..+...++++.+|+.+||+++|.+|||+.+|++||||
T Consensus 222 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~ 301 (343)
T cd07851 222 IDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYL 301 (343)
T ss_pred HHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCc
Confidence 221111111000 011123457889999999999999999999999999999
Q ss_pred hhhhccc
Q 001366 586 NEFQEVC 592 (1092)
Q Consensus 586 ~~~~~~~ 592 (1092)
.......
T Consensus 302 ~~~~~~~ 308 (343)
T cd07851 302 AEYHDPE 308 (343)
T ss_pred cccCCCc
Confidence 8765444
No 396
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.93 E-value=6.3e-26 Score=250.87 Aligned_cols=239 Identities=15% Similarity=0.169 Sum_probs=173.3
Q ss_pred ccccceeeeCCCCCcccccccccccccccc-ccCchh-hHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVT-TTMPSD-AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.++.|.||+|... ..+..++.|.... ...... ...-.++...++..+|++++..+.....+...+
T Consensus 12 ~g~~~~v~~~~~~----~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~--------- 78 (267)
T cd08224 12 KGQFSVVYKAICL----LDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELN--------- 78 (267)
T ss_pred cCCceEEEEEEEc----CCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE---------
Confidence 3468999999874 2244555544321 112222 233345566778889999987666544322222
Q ss_pred ccccCCCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg 374 (1092)
.+|||++|++|.+++.. .+..++...++.++.||+.||.|||++||+||||||+||+++.++.++++|||
T Consensus 79 -------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 79 -------IVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred -------EEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccc
Confidence 37999999999999954 23457888999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++.+....
T Consensus 152 ~~~~~~~~~----------------------------------------------------------------------- 160 (267)
T cd08224 152 LGRFFSSKT----------------------------------------------------------------------- 160 (267)
T ss_pred eeeeccCCC-----------------------------------------------------------------------
Confidence 876533100
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCc---
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS--- 531 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~--- 531 (1092)
.......++..|+|||.+.+..++.++|||||||++|+|+++..+
T Consensus 161 --------------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 208 (267)
T cd08224 161 --------------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 208 (267)
T ss_pred --------------------------------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCccc
Confidence 000133577889999999988899999999999999999986322
Q ss_pred -HHHHHHHHHhccccCCCCCCC-CCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 532 -ERALAAAMSDLRDRILPPSFL-SENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 532 -~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
..........+.....++... ..+..+.+++.+||+++|++||++.+|++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 209 DKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred CCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 122233333444444444333 45678899999999999999999999886
No 397
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.93 E-value=7.1e-26 Score=249.17 Aligned_cols=237 Identities=14% Similarity=0.115 Sum_probs=167.9
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+.+.+ +|.|.||+|...+ ..++.|+.... .....-.++...+...+|||++........+..
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~------~~~~iK~~~~~---~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~---- 73 (254)
T cd05083 7 KLTLGEIIGEGEFGAVLQGEYTG------QKVAVKNIKCD---VTAQAFLEETAVMTKLHHKNLVRLLGVILHNGL---- 73 (254)
T ss_pred HceeeeeeccCCCCceEecccCC------CceEEEeecCc---chHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCc----
Confidence 34444433 4789999987633 33444433211 111223445566778899999987655432221
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
-.+|||+.|++|.+++.... ..++...++.++.||+.||.|||++|++||||||+||+++.++.+|
T Consensus 74 -------------~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~k 140 (254)
T cd05083 74 -------------YIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAK 140 (254)
T ss_pred -------------EEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEE
Confidence 13799999999999997643 3577878999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
++|||+++......
T Consensus 141 l~Dfg~~~~~~~~~------------------------------------------------------------------ 154 (254)
T cd05083 141 VSDFGLARVGSMGV------------------------------------------------------------------ 154 (254)
T ss_pred ECCCccceeccccC------------------------------------------------------------------
Confidence 99999876422000
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~ 528 (1092)
.....+..|+|||.+.+..++.++|+|||||++|||++ +
T Consensus 155 ----------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g 194 (254)
T cd05083 155 ----------------------------------------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYG 194 (254)
T ss_pred ----------------------------------------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCC
Confidence 01112345999999998899999999999999999996 4
Q ss_pred ---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|....... ....+.....++.....++.+.+|+.+||..+|.+||++.++++.
T Consensus 195 ~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 250 (254)
T cd05083 195 RAPYPKMSLKE-VKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREK 250 (254)
T ss_pred CCCCccCCHHH-HHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 33322211 122222222222334557888999999999999999999999863
No 398
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.93 E-value=4.8e-25 Score=242.72 Aligned_cols=261 Identities=21% Similarity=0.265 Sum_probs=211.9
Q ss_pred ecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCc----------eEEEeeccCccEEEEEEecCCCCEEEEEeCCC
Q 001366 825 MSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ----------TVSHYIEHEKRAWSVDFSQVHPTKLASGSDDC 894 (1092)
Q Consensus 825 ~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~----------~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg 894 (1092)
+.|.+.|+.+...|.+..++|+.+..+.|.|||..+.. .-..+.+|.+.-.+++|++.....|++|+.|+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence 45889999999999989999999999999999986532 11278899998899999998888999999999
Q ss_pred cEEEEecCCCce-------eeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCC-CCcceEEecCCCCCeEEEEE
Q 001366 895 SVKLWNINEKNS-------LATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRN-ARAPWCVLAGHEKAVSYVKF 965 (1092)
Q Consensus 895 ~I~iWDl~~~~~-------l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~-~~~~~~~l~~H~~~V~~v~f 965 (1092)
+|++||+..... ...+. |...|..++|++....+|++.+.|+.+.|||+|+ ..++.....+|.+.|.|++|
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~f 280 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAF 280 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEe
Confidence 999999985432 22233 6778999999998888999999999999999996 44466778899999999999
Q ss_pred c--CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecC-CCEEEEEecCCcEEEEeCCCCCcee
Q 001366 966 L--DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTA-DGYIACGSESNEVYAYHRSLPMPIT 1042 (1092)
Q Consensus 966 s--~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spd-g~~lasgs~Dg~I~Iwd~~~~~~i~ 1042 (1092)
+ ++..|||||.|++|.+||+|+. ..++.++.+|...|..|.|||+ ...||+++.|+.+.|||+..-...+
T Consensus 281 np~~~~ilAT~S~D~tV~LwDlRnL-------~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq 353 (422)
T KOG0264|consen 281 NPFNEFILATGSADKTVALWDLRNL-------NKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQ 353 (422)
T ss_pred CCCCCceEEeccCCCcEEEeechhc-------ccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEecccccccc
Confidence 8 6667999999999999999964 3578999999999999999997 4588999999999999987533222
Q ss_pred eeeccccCCCCCccccCCCCCCEEEEEEeCCCC-EEEEEecCCeEEEEEcC
Q 001366 1043 SYKFGSIDPISGKETDDDNGLFVSSVCWRRRSD-MVVAANSSGCIKVLQMV 1092 (1092)
Q Consensus 1043 ~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~-~Lasgs~DG~V~vW~lv 1092 (1092)
.-..+.-.+.....+-.||...|+.+.|+|... .++|.+.|+.+.||++.
T Consensus 354 ~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 354 SPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred ChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 211111111111123357899999999999765 56788999999999973
No 399
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.93 E-value=1.2e-26 Score=264.14 Aligned_cols=239 Identities=16% Similarity=0.152 Sum_probs=172.4
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhh-hhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAA-GAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..+-+|.||||.. -..+|+|++--.+.-.++..+|+ +++.++.-+|.||+....+ +...+.
T Consensus 401 GsGsFGtV~Rg~w-------hGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~-----------~~~p~~ 462 (678)
T KOG0193|consen 401 GSGSFGTVYRGRW-------HGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGA-----------CMNPPL 462 (678)
T ss_pred ccccccceeeccc-------ccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehh-----------hcCCce
Confidence 3445899999999 55677777754444334555555 4555666699998853333 222211
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
+ ++...|+|-+|+.+|.-...+++....+.|++||+.|++|||.++|||||||..||+|..++.|||.||||+.
T Consensus 463 A------IiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLat 536 (678)
T KOG0193|consen 463 A------IITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLAT 536 (678)
T ss_pred e------eeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEeccccee
Confidence 1 3678899999999997766788888999999999999999999999999999999999999999999999985
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.-. |. .+
T Consensus 537 vk~-----------------~w-~g------------------------------------------------------- 543 (678)
T KOG0193|consen 537 VKT-----------------RW-SG------------------------------------------------------- 543 (678)
T ss_pred eee-----------------ee-cc-------------------------------------------------------
Confidence 422 00 00
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC---CCCCccccchhhhHHHHHHcCC---CCc
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---GVCTTSSNIYSLGVLFFELFGR---FDS 531 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~---~~~t~~sDIwSLGvll~ell~~---f~~ 531 (1092)
...+....|..-|||||+++. .+|++.+||||+||++|||+++ |..
T Consensus 544 ----------------------------~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi 595 (678)
T KOG0193|consen 544 ----------------------------EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI 595 (678)
T ss_pred ----------------------------ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC
Confidence 000012234556999999976 6799999999999999999996 553
Q ss_pred HHHHHHHHHhccccCCCC--CCCCCCh-hHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 532 ERALAAAMSDLRDRILPP--SFLSENP-KEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 532 ~~~~~~~~~~~~~~~~p~--~~~~~~~-~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
......++..-+....|. ......| ++.+|+..||.+++++||.+.+||..
T Consensus 596 ~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~ 649 (678)
T KOG0193|consen 596 QNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSK 649 (678)
T ss_pred CChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHH
Confidence 322333333333322222 2223345 77899999999999999999999984
No 400
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.93 E-value=5.2e-26 Score=249.35 Aligned_cols=241 Identities=20% Similarity=0.201 Sum_probs=178.1
Q ss_pred cccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
+|.|.||++.... .+..++.|+...... .........+...++..+|||++...+.........
T Consensus 11 g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~----------- 75 (258)
T cd08215 11 GSFGKVYLVRRKS----DGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLC----------- 75 (258)
T ss_pred CCCeEEEEEEEcC----CCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEE-----------
Confidence 5779999988742 133444444432222 233344555666777888999887665543321111
Q ss_pred ccCCCcccccCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~---~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
++++|++|++|.+++... +..++..++..++.||+.||.|||++|++|+||+|+||+++.++.++++|||.+
T Consensus 76 -----lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~ 150 (258)
T cd08215 76 -----IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGIS 150 (258)
T ss_pred -----EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccce
Confidence 379999999999999765 366888899999999999999999999999999999999999999999999987
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
.......
T Consensus 151 ~~~~~~~------------------------------------------------------------------------- 157 (258)
T cd08215 151 KVLSSTV------------------------------------------------------------------------- 157 (258)
T ss_pred eecccCc-------------------------------------------------------------------------
Confidence 6543100
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
.......|++.|+|||.+.+..++.++|+||||+++|+|+++ |....
T Consensus 158 ------------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~ 207 (258)
T cd08215 158 ------------------------------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN 207 (258)
T ss_pred ------------------------------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc
Confidence 000134578889999999988899999999999999999986 33322
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
............+++.....+..+.+++.+||..+|++||++.++|+||||
T Consensus 208 -~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 208 -LLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred -HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 222333333333444444567889999999999999999999999999997
No 401
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.93 E-value=7.4e-26 Score=250.06 Aligned_cols=236 Identities=16% Similarity=0.061 Sum_probs=166.6
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..+|.|.||++...+ ...++.|+...... ....-.++...+...+||+++.+......+ ..
T Consensus 15 g~g~~~~v~~~~~~~-----~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----------~~-- 75 (260)
T cd05069 15 GQGCFGEVWMGTWNG-----TTKVAIKTLKPGTM--MPEAFLQEAQIMKKLRHDKLVPLYAVVSEE----------PI-- 75 (260)
T ss_pred cCcCCCeEEEEEEcC-----CceEEEEEcccCCc--cHHHHHHHHHHHHhCCCCCeeeEEEEEcCC----------Cc--
Confidence 346789999987643 22344443322221 112223455677788999988754332110 01
Q ss_pred cccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
..+|+|+.|++|.+++... +..++...++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++
T Consensus 76 -----~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~ 150 (260)
T cd05069 76 -----YIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLAR 150 (260)
T ss_pred -----EEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccce
Confidence 1389999999999999653 3457787899999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.......
T Consensus 151 ~~~~~~~------------------------------------------------------------------------- 157 (260)
T cd05069 151 LIEDNEY------------------------------------------------------------------------- 157 (260)
T ss_pred EccCCcc-------------------------------------------------------------------------
Confidence 5431000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSER 533 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~ 533 (1092)
.......++..|+|||.+.+..++.++|||||||++|||++ + |....
T Consensus 158 -----------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 208 (260)
T cd05069 158 -----------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV 208 (260)
T ss_pred -----------------------------cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 00001234566999999988889999999999999999997 4 43322
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
... .+..+.....++.....++.+.+|+.+||+++|.+||+++++++
T Consensus 209 ~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 209 NRE-VLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHH-HHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 222 22233333333334455778899999999999999999999876
No 402
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=9.9e-27 Score=245.78 Aligned_cols=248 Identities=17% Similarity=0.199 Sum_probs=181.5
Q ss_pred hHHHhhhcc----ccceeeeCCCCCccccccccccccccccccCch--hhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 213 EFFVKTTLK----GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS--DAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 213 ~~~~~~~~~----g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
.|.+.+.|+ ||.+.||-...+.+++ .||.--+-+.. ..+-...+-+.|...+||-...+.-..+.+.-
T Consensus 169 dFdfLKvLGkGTFGKVIL~rEKat~k~YA------iKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~dr 242 (516)
T KOG0690|consen 169 DFDFLKVLGKGTFGKVILCREKATGKLYA------IKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDR 242 (516)
T ss_pred hhhHHHHhcCCccceEEEEeecccCceee------hhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCce
Confidence 355555554 6777888777666555 33321111111 11223444556677788876654433332222
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
.| .+|||..||.|.-.|.+. +.+++..++.+-..|+.||.|||+++||.||||-+|+||+.+|
T Consensus 243 -----------lC-----FVMeyanGGeLf~HLsre-r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDG 305 (516)
T KOG0690|consen 243 -----------LC-----FVMEYANGGELFFHLSRE-RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDG 305 (516)
T ss_pred -----------EE-----EEEEEccCceEeeehhhh-hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCC
Confidence 22 289999999999888664 4677778999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
++||+|||++++-..
T Consensus 306 HIKitDFGLCKE~I~----------------------------------------------------------------- 320 (516)
T KOG0690|consen 306 HIKITDFGLCKEEIK----------------------------------------------------------------- 320 (516)
T ss_pred ceEeeecccchhccc-----------------------------------------------------------------
Confidence 999999999987320
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
+| ...++.||||.|.|||+|.+..|+.++|.|.+||++|||+
T Consensus 321 --~g------------------------------------~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMm 362 (516)
T KOG0690|consen 321 --YG------------------------------------DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMM 362 (516)
T ss_pred --cc------------------------------------ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHH
Confidence 00 1123789999999999999999999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEF 588 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-----a~eiL~~~~~~~~ 588 (1092)
|| |...++......++...+..|.. .+|+...|+..+|.+||.+|.. |.||.+|+||...
T Consensus 363 CGRLPFyn~dh~kLFeLIl~ed~kFPr~--ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 363 CGRLPFYNKDHEKLFELILMEDLKFPRT--LSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred hccCcccccchhHHHHHHHhhhccCCcc--CCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence 96 65554433333334333333333 3899999999999999999964 6899999999764
No 403
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.93 E-value=4.4e-26 Score=262.26 Aligned_cols=253 Identities=19% Similarity=0.244 Sum_probs=174.1
Q ss_pred cccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
+|.|+||++.... ++..++.|...... ..........+..++...+|||++.+.+......... .
T Consensus 16 G~~~~vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~----~------ 81 (337)
T cd07858 16 GAYGIVCSAKNSE----TNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREA----F------ 81 (337)
T ss_pred CCCeEEEEEEecC----CCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccc----c------
Confidence 5789999988632 34555554432211 1112233445666778889999998665433211000 0
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
...-.+++|+. ++|.++++..+ .++...++.++.||+.||.|||++||+||||||+||+++.++.+|++|||+++..
T Consensus 82 -~~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 82 -NDVYIVYELMD-TDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT 158 (337)
T ss_pred -CcEEEEEeCCC-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence 00123788885 68999997654 4777799999999999999999999999999999999999999999999988653
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
....
T Consensus 159 ~~~~---------------------------------------------------------------------------- 162 (337)
T cd07858 159 SEKG---------------------------------------------------------------------------- 162 (337)
T ss_pred CCCc----------------------------------------------------------------------------
Confidence 3100
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
.......++.+|+|||.+.+ ..++.++|||||||++|+|+++ |......
T Consensus 163 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~ 215 (337)
T cd07858 163 ---------------------------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV 215 (337)
T ss_pred ---------------------------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH
Confidence 00013457888999998875 5689999999999999999986 3222110
Q ss_pred --HHHHHh------------------------ccccC---CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001366 536 --AAAMSD------------------------LRDRI---LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1092)
Q Consensus 536 --~~~~~~------------------------~~~~~---~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~ 586 (1092)
...... +.... +.......++++.+|+.+||+++|++|||+.++|+||||.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~ 295 (337)
T cd07858 216 HQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLA 295 (337)
T ss_pred HHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchh
Confidence 000000 00000 0111335678889999999999999999999999999998
Q ss_pred hhhccch
Q 001366 587 EFQEVCA 593 (1092)
Q Consensus 587 ~~~~~~~ 593 (1092)
.......
T Consensus 296 ~~~~~~~ 302 (337)
T cd07858 296 SLHDPSD 302 (337)
T ss_pred hhcCccc
Confidence 7655543
No 404
>PTZ00421 coronin; Provisional
Probab=99.93 E-value=5.2e-24 Score=253.38 Aligned_cols=234 Identities=15% Similarity=0.191 Sum_probs=184.1
Q ss_pred ecCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 775 FNNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 775 l~~h~~~V~sl~fsp-dg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
+.+|.+.|.+++|+| ++++||+|+.|++|+|||+.................+|...|.+++|+|+..++|++|+.|++|
T Consensus 71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtV 150 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVV 150 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEE
Confidence 668999999999999 8899999999999999998752111111112234567999999999999856899999999999
Q ss_pred EEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecC-C-ceEEEEEccCCCeEEEE
Q 001366 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNI-A-NVCCVQFSAHSSHLLAF 931 (1092)
Q Consensus 854 ~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~-~-~V~sl~fsp~~~~~lat 931 (1092)
+|||+.+++.+..+.+|...|.+++|+| ++.+|++|+.|++|+|||+++++.+.++..+ . .+..+.|.+++..++++
T Consensus 151 rIWDl~tg~~~~~l~~h~~~V~sla~sp-dG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~ 229 (493)
T PTZ00421 151 NVWDVERGKAVEVIKCHSDQITSLEWNL-DGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITL 229 (493)
T ss_pred EEEECCCCeEEEEEcCCCCceEEEEEEC-CCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEE
Confidence 9999999999999999999999999999 8999999999999999999999988887743 3 34577899987655555
Q ss_pred E---ECCCeEEEEEcCCCCcceEEecCCC-CCeEEEEEc-CCCEEEEEE-CCCeEEEEEcCCCCCCCCCCCceeEEEc-C
Q 001366 932 G---SADYRTYCYDLRNARAPWCVLAGHE-KAVSYVKFL-DSGTLVTAS-TDNKLKLWDLKRTSHTGPSTNACSLTFS-G 1004 (1092)
Q Consensus 932 g---s~Dg~I~vwDlr~~~~~~~~l~~H~-~~V~~v~fs-~~~~L~Sgs-~Dg~I~vWDl~~~~~~~~~~~~~~~~l~-~ 1004 (1092)
| +.|+.|++||+++...++.....+. ..+....|+ +++.|++++ .|+.|++||+.+. ..+.... .
T Consensus 230 G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~--------~~~~~~~~~ 301 (493)
T PTZ00421 230 GCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNE--------RLTFCSSYS 301 (493)
T ss_pred ecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCC--------ceEEEeecc
Confidence 5 2489999999998776666555443 345555666 667787777 5999999999843 3333332 2
Q ss_pred CCCCeEEEEEecC
Q 001366 1005 HTNEKNFVGLSTA 1017 (1092)
Q Consensus 1005 h~~~V~~v~~spd 1017 (1092)
+..++..++|.|.
T Consensus 302 s~~~~~g~~~~pk 314 (493)
T PTZ00421 302 SVEPHKGLCMMPK 314 (493)
T ss_pred CCCCCcceEeccc
Confidence 4556778888885
No 405
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=4.2e-24 Score=225.00 Aligned_cols=273 Identities=17% Similarity=0.278 Sum_probs=221.5
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEE
Q 001366 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLW 856 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IW 856 (1092)
...+.|+++.|+|.++.|+++++||++++|++... .....+.|..++++++|.+ ...+++|+.||.|+.+
T Consensus 11 pP~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~--------~l~~~~~~~~plL~c~F~d--~~~~~~G~~dg~vr~~ 80 (323)
T KOG1036|consen 11 PPEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPAN--------SLKLKFKHGAPLLDCAFAD--ESTIVTGGLDGQVRRY 80 (323)
T ss_pred CChhceeeEEEcCcCCcEEEEeccCcEEEEeccch--------hhhhheecCCceeeeeccC--CceEEEeccCceEEEE
Confidence 34778999999999999999999999999998752 2334556899999999998 4789999999999999
Q ss_pred ECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCC
Q 001366 857 DACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADY 936 (1092)
Q Consensus 857 D~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg 936 (1092)
|+.+++.... ..|...|.||.+++ ....+++||+|++|++||.+....+.++.....|.|+.... +.|++|+.|.
T Consensus 81 Dln~~~~~~i-gth~~~i~ci~~~~-~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~g---~~LvVg~~~r 155 (323)
T KOG1036|consen 81 DLNTGNEDQI-GTHDEGIRCIEYSY-EVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVSG---NRLVVGTSDR 155 (323)
T ss_pred EecCCcceee-ccCCCceEEEEeec-cCCeEEEcccCccEEEEeccccccccccccCceEEEEeccC---CEEEEeecCc
Confidence 9998876544 46999999999998 66789999999999999999988888888888999998863 4788999999
Q ss_pred eEEEEEcCCCCcceEE-ecCCCCCeEEEEEcC-CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCC-------
Q 001366 937 RTYCYDLRNARAPWCV-LAGHEKAVSYVKFLD-SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTN------- 1007 (1092)
Q Consensus 937 ~I~vwDlr~~~~~~~~-l~~H~~~V~~v~fs~-~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~------- 1007 (1092)
.|.+||+|+...+... ...-+-.++||++.| +.-++++|.||.|.+=.+..... .....+.|+.|..
T Consensus 156 ~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~----~~skkyaFkCHr~~~~~~~~ 231 (323)
T KOG1036|consen 156 KVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEE----AQSKKYAFKCHRLSEKDTEI 231 (323)
T ss_pred eEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchH----HhhhceeEEeeecccCCceE
Confidence 9999999987765422 123455788998874 44578899999998877764321 1233456666643
Q ss_pred --CeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEec
Q 001366 1008 --EKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANS 1082 (1092)
Q Consensus 1008 --~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~ 1082 (1092)
+|++++|+|-.+.+|+|+.||.|-+||....+.+..+. .-...|.+++|+.+|..||.|++
T Consensus 232 ~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~--------------~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 232 IYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLA--------------KYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred EEEeceeEeccccceEEecCCCceEEEccCcchhhhhhcc--------------CCCCceEEEEeccCCCeEEEEec
Confidence 68999999998899999999999999988777665443 12346999999999999999874
No 406
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=3.1e-24 Score=246.78 Aligned_cols=273 Identities=19% Similarity=0.247 Sum_probs=226.1
Q ss_pred ccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCccccc
Q 001366 741 IQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYY 820 (1092)
Q Consensus 741 ~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~ 820 (1092)
+|+....+.......+-+|+....++...... +...|+++.|+++|.+||+|..+|.|.|||..... ..
T Consensus 184 dWss~n~laValg~~vylW~~~s~~v~~l~~~-----~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k------~~ 252 (484)
T KOG0305|consen 184 DWSSANVLAVALGQSVYLWSASSGSVTELCSF-----GEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQK------KT 252 (484)
T ss_pred hcccCCeEEEEecceEEEEecCCCceEEeEec-----CCCceEEEEECCCCCEEEEeecCCeEEEEehhhcc------cc
Confidence 46766677777778899999877665544332 28899999999999999999999999999986521 11
Q ss_pred ceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEE-eeccCccEEEEEEecCCCCEEEEEeCCCcEEEE
Q 001366 821 PAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSH-YIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLW 899 (1092)
Q Consensus 821 ~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~-l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iW 899 (1092)
+.....|...|.|++|+. ..+.+|+.|+.|..+|+...+.... +.+|...|+.++|++ ++.++|+|+.|+.+.||
T Consensus 253 ~~~~~~h~~rvg~laW~~---~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~-d~~~lASGgnDN~~~Iw 328 (484)
T KOG0305|consen 253 RTLRGSHASRVGSLAWNS---SVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSP-DGNQLASGGNDNVVFIW 328 (484)
T ss_pred ccccCCcCceeEEEeccC---ceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECC-CCCeeccCCCccceEec
Confidence 122223899999999994 5899999999999999998875444 889999999999999 99999999999999999
Q ss_pred ecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEE--CCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEE--
Q 001366 900 NINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGS--ADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVT-- 973 (1092)
Q Consensus 900 Dl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs--~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~S-- 973 (1092)
|.....++..+. |.+.|..++|+|....+||+|+ .|++|++||..++...... .-...|+.|.|+ ..+.|++
T Consensus 329 d~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~v--dtgsQVcsL~Wsk~~kEi~sth 406 (484)
T KOG0305|consen 329 DGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSV--DTGSQVCSLIWSKKYKELLSTH 406 (484)
T ss_pred cCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccc--ccCCceeeEEEcCCCCEEEEec
Confidence 997777776665 8899999999999888999975 6999999999987643222 235679999999 4555665
Q ss_pred EECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCC
Q 001366 974 ASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLP 1038 (1092)
Q Consensus 974 gs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~ 1038 (1092)
|..++.|.||+.. +...+..+.+|+..|..+++||||..|++|+.|.++++|++-..
T Consensus 407 G~s~n~i~lw~~p--------s~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 407 GYSENQITLWKYP--------SMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred CCCCCcEEEEecc--------ccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 4467889999998 45678899999999999999999999999999999999997654
No 407
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.93 E-value=9.2e-26 Score=247.83 Aligned_cols=243 Identities=17% Similarity=0.164 Sum_probs=173.3
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|+||++...+.-......++.|+...............+..++....|++++.++.....+...+
T Consensus 9 ~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~----------- 77 (258)
T smart00219 9 EGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLM----------- 77 (258)
T ss_pred cCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeE-----------
Confidence 357899999988552211124445555433222212333444556667779999988766544332222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHK-GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~-~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+|+|+.|++|.+++...... ++...++.++.||+.||.|||++||+||||||+||+++.++.++++|||+++.
T Consensus 78 -----~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~ 152 (258)
T smart00219 78 -----IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRD 152 (258)
T ss_pred -----EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCcee
Confidence 379999999999999765443 78889999999999999999999999999999999999999999999998876
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.......
T Consensus 153 ~~~~~~~------------------------------------------------------------------------- 159 (258)
T smart00219 153 LYDDDYY------------------------------------------------------------------------- 159 (258)
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 4411000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~ 534 (1092)
.. ....++..|+|||.+.+..++.++|||||||++|||++ + |... .
T Consensus 160 ---------------------------~~--~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~-~ 209 (258)
T smart00219 160 ---------------------------KK--KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM-S 209 (258)
T ss_pred ---------------------------cc--ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-C
Confidence 00 01125677999999988889999999999999999997 3 3222 2
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
.......+.....++.....+..+.+++.+||.++|++|||+.++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 210 NEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 22223333333333334446788999999999999999999999986
No 408
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.93 E-value=7.4e-26 Score=249.03 Aligned_cols=236 Identities=17% Similarity=0.137 Sum_probs=166.4
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+|.|.||++...+ +..++.|+....... ...-..+...+....||+++.++.........+
T Consensus 15 g~~g~v~~~~~~~-----~~~~~~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~------------ 75 (256)
T cd05112 15 GQFGLVWLGYWLE-----KRKVAIKTIREGAMS--EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPIC------------ 75 (256)
T ss_pred cccceEEEEEEeC-----CCeEEEEECCCCCCC--HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceE------------
Confidence 4679999987642 334455444322221 222344566777889999887655433222111
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
.+|+|+.|++|.+++......++...++.++.|++.+|+|||++||+||||||+||+++.++.+|++|||+++...
T Consensus 76 ----~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 151 (256)
T cd05112 76 ----LVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVL 151 (256)
T ss_pred ----EEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecc
Confidence 3899999999999997765567787899999999999999999999999999999999999999999999886543
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
....
T Consensus 152 ~~~~---------------------------------------------------------------------------- 155 (256)
T cd05112 152 DDQY---------------------------------------------------------------------------- 155 (256)
T ss_pred cCcc----------------------------------------------------------------------------
Confidence 1000
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHHH
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALA 536 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~~ 536 (1092)
.......++..|+|||.+.+..++.++|||||||++|||++ + |..... .
T Consensus 156 --------------------------~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~ 208 (256)
T cd05112 156 --------------------------TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-S 208 (256)
T ss_pred --------------------------cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-H
Confidence 00001223557999999998889999999999999999997 4 332221 2
Q ss_pred HHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 537 AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 537 ~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
.....+.....+......+..+.+|+.+||+.+|.+||++.++++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 209 EVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 2222222211111112246788999999999999999999999874
No 409
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.93 E-value=9.8e-26 Score=248.37 Aligned_cols=230 Identities=15% Similarity=0.117 Sum_probs=163.3
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+|.|+||++... +..++.|.... +.....-..+..+++...|++++............
T Consensus 17 g~~~~v~~~~~~------~~~~~~k~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~------------- 74 (256)
T cd05082 17 GEFGDVMLGDYR------GNKVAVKCIKN---DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG------------- 74 (256)
T ss_pred cCCCeEEEEEEc------CCcEEEEEeCC---CchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCc-------------
Confidence 367899998653 23334433321 11122234455667788899988766543322111
Q ss_pred cCCCcccccCCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~-~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
...+|||++|++|.++++..+. .++...++.++.||+.||.|||++||+||||||+||+++.++.+|++|||+++..
T Consensus 75 --~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~ 152 (256)
T cd05082 75 --LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 152 (256)
T ss_pred --eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceec
Confidence 1137999999999999976543 4677789999999999999999999999999999999999999999999987653
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
....
T Consensus 153 ~~~~---------------------------------------------------------------------------- 156 (256)
T cd05082 153 SSTQ---------------------------------------------------------------------------- 156 (256)
T ss_pred cccC----------------------------------------------------------------------------
Confidence 2100
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~ 535 (1092)
....++..|+|||.+.+..++.++|||||||++|||++ + |... ..
T Consensus 157 ------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-~~ 205 (256)
T cd05082 157 ------------------------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PL 205 (256)
T ss_pred ------------------------------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-CH
Confidence 01122346999999998889999999999999999996 4 3322 12
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
......+.....+......++.+.+|+.+||+.+|++|||+.++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 206 KDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 2222222222222333445788899999999999999999999976
No 410
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.93 E-value=7.8e-26 Score=247.79 Aligned_cols=246 Identities=17% Similarity=0.121 Sum_probs=179.2
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.+|.|.||+|...+ .+..++.|+...... ........++...++...|||++.+......... ...
T Consensus 10 ~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-------~~~-- 76 (260)
T cd06606 10 RGSFGSVYLALDKD----TGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEK-------NTL-- 76 (260)
T ss_pred ecCceEEEEEEECC----CCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCC-------CeE--
Confidence 45789999998742 244455554433222 1233444556667788889999987665553310 011
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+++||+.|++|.+++.... .++..++..++.|++.+|.|||++|++|+||+|+||+++.++.++++|||.+..
T Consensus 77 -----~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 150 (260)
T cd06606 77 -----NIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKR 150 (260)
T ss_pred -----EEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEe
Confidence 13799999999999997765 678889999999999999999999999999999999999999999999998876
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.......
T Consensus 151 ~~~~~~~------------------------------------------------------------------------- 157 (260)
T cd06606 151 LGDIETG------------------------------------------------------------------------- 157 (260)
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 4411000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
.......++..|+|||.+.+..++.++|||||||++|+|+++ |......
T Consensus 158 ----------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 209 (260)
T cd06606 158 ----------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP 209 (260)
T ss_pred ----------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch
Confidence 000133567789999999888899999999999999999985 3333322
Q ss_pred HHHHHhccc-cCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 536 AAAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 536 ~~~~~~~~~-~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
...+..+.. ...+......++.+.+|+.+||.++|.+||++.+++.||||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 210 MAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 233333332 23333333447889999999999999999999999999997
No 411
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.93 E-value=6.2e-26 Score=261.56 Aligned_cols=257 Identities=19% Similarity=0.154 Sum_probs=169.9
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC---CccCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL---GARTGVP 296 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 296 (1092)
.+|.|+||+|... .++..++.|....... .......++...+...+|||++.+++....+..... .......
T Consensus 15 ~g~~g~vy~~~~~----~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (342)
T cd07854 15 CGSNGLVFSAVDS----DCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELN 89 (342)
T ss_pred CCCCEEEEEEEEC----CCCcEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccc
Confidence 3578999999763 2344455543322211 222334455667788899999976655332221110 0000111
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc-CCcEEEecccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGPII 375 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~-~~~vkl~Dfg~ 375 (1092)
. ...+|||+. ++|.+++... .++...++.++.||+.||+|||++||+||||||+||+++. ++.+|++|||+
T Consensus 90 ~-----~~lv~e~~~-~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~ 161 (342)
T cd07854 90 S-----VYIVQEYME-TDLANVLEQG--PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGL 161 (342)
T ss_pred e-----EEEEeeccc-ccHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCccc
Confidence 1 124788887 5999988643 4677799999999999999999999999999999999974 45789999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++.+......
T Consensus 162 ~~~~~~~~~~---------------------------------------------------------------------- 171 (342)
T cd07854 162 ARIVDPHYSH---------------------------------------------------------------------- 171 (342)
T ss_pred ceecCCcccc----------------------------------------------------------------------
Confidence 8654310000
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCc
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDS 531 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~ 531 (1092)
....+...|+.+|+|||.+.+ ..++.++|||||||++|||+++ |..
T Consensus 172 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~ 221 (342)
T cd07854 172 ------------------------------KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAG 221 (342)
T ss_pred ------------------------------ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 000012357888999998765 5678999999999999999985 433
Q ss_pred HHHHHHHHHhcccc----------------------CCC------CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 532 ERALAAAMSDLRDR----------------------ILP------PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 532 ~~~~~~~~~~~~~~----------------------~~p------~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
..........+... ..+ ......++++.+|+.+||.+||.+|||+.++|.||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~ 301 (342)
T cd07854 222 AHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHP 301 (342)
T ss_pred CCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCC
Confidence 32222221111100 000 11234567788999999999999999999999999
Q ss_pred hhhhhh
Q 001366 584 VTNEFQ 589 (1092)
Q Consensus 584 ~~~~~~ 589 (1092)
||....
T Consensus 302 ~~~~~~ 307 (342)
T cd07854 302 YMSCYS 307 (342)
T ss_pred cccccc
Confidence 998643
No 412
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.93 E-value=7e-26 Score=259.45 Aligned_cols=256 Identities=17% Similarity=0.184 Sum_probs=176.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.+|.|.||++...+ .+..++.|....... ........++...+...+|||++.+......... .
T Consensus 10 ~g~~~~v~~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-----------~ 74 (330)
T cd07834 10 SGAYGVVCSAVDKR----TGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSP-----------E 74 (330)
T ss_pred CCCCeEEEEEEeCC----CCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCc-----------c
Confidence 35789999998633 234444444322211 1222334445566777789999876655332211 0
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
++...-++|+|+.+ +|.+++...+ .++...++.++.||+.||+|||++||+||||||+||+++.++.++++|||++..
T Consensus 75 ~~~~~~lv~e~~~~-~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 75 DFNDVYIVTELMET-DLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred cccceEEEecchhh-hHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 11112247888874 8999997655 678879999999999999999999999999999999999999999999998876
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
......
T Consensus 153 ~~~~~~-------------------------------------------------------------------------- 158 (330)
T cd07834 153 VDPDED-------------------------------------------------------------------------- 158 (330)
T ss_pred eccccc--------------------------------------------------------------------------
Confidence 441000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
.........+|++|+|||.+.+. .++.++|||||||++|+|+++ |.+...
T Consensus 159 --------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~ 212 (330)
T cd07834 159 --------------------------EKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY 212 (330)
T ss_pred --------------------------ccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH
Confidence 00011245678999999999887 789999999999999999986 333222
Q ss_pred HHHHHHhcc--ccC---------------------------CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 535 LAAAMSDLR--DRI---------------------------LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 535 ~~~~~~~~~--~~~---------------------------~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
......... ... +...+...++.+.+|+.+||+++|.+||++.++++||||
T Consensus 213 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~ 292 (330)
T cd07834 213 IDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYL 292 (330)
T ss_pred HHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccH
Confidence 111110000 000 000123356778999999999999999999999999999
Q ss_pred hhhhccc
Q 001366 586 NEFQEVC 592 (1092)
Q Consensus 586 ~~~~~~~ 592 (1092)
.......
T Consensus 293 ~~~~~~~ 299 (330)
T cd07834 293 AQLHDPE 299 (330)
T ss_pred Hhhcccc
Confidence 8876543
No 413
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.93 E-value=6.5e-26 Score=260.42 Aligned_cols=261 Identities=15% Similarity=0.143 Sum_probs=175.5
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchh-------------hHhhhhhhhhhccCCCCCCCccccceecCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-------------AALKAAGAMMVASNASPKPVGVGTAVVSNG 285 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (1092)
..+|.|+||++.... .+..++.|+......... .....++..++...+|||++.+.+....+.
T Consensus 18 g~G~~g~vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 93 (335)
T PTZ00024 18 GEGTYGKVEKAYDTL----TGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD 93 (335)
T ss_pred cCCCceeEEEEEECC----CCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence 345789999997532 244555554422211110 012345566788889999998766544332
Q ss_pred CCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC
Q 001366 286 SLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS 365 (1092)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~ 365 (1092)
..+ .+|||+. ++|.+++.... .++...+..++.||+.||.|||++||+|+||||+||+++..
T Consensus 94 ~~~----------------lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~ 155 (335)
T PTZ00024 94 FIN----------------LVMDIMA-SDLKKVVDRKI-RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSK 155 (335)
T ss_pred cEE----------------EEEeccc-cCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCC
Confidence 222 3788887 59999997654 46777999999999999999999999999999999999999
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+.+|++|||+++....+.........
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~~~~~~------------------------------------------------------ 181 (335)
T PTZ00024 156 GICKIADFGLARRYGYPPYSDTLSKD------------------------------------------------------ 181 (335)
T ss_pred CCEEECCccceeeccccccccccccc------------------------------------------------------
Confidence 99999999998765421110000000
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~e 524 (1092)
. ............++.+|+|||.+.+. .++.++|||||||++||
T Consensus 182 ---------~--------------------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~e 226 (335)
T PTZ00024 182 ---------E--------------------------TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAE 226 (335)
T ss_pred ---------c--------------------------cccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHH
Confidence 0 00000111234578899999999874 46999999999999999
Q ss_pred HcCC---CCcHHHHHHHHHhc--cccCC--------------------CC----CCCCCChhHHHHHHhccccCCCCCCC
Q 001366 525 LFGR---FDSERALAAAMSDL--RDRIL--------------------PP----SFLSENPKEAGFCLWQLHPEPLSRPT 575 (1092)
Q Consensus 525 ll~~---f~~~~~~~~~~~~~--~~~~~--------------------p~----~~~~~~~~~~~li~~lL~~dP~~Rps 575 (1092)
|+++ |............. ..... |+ .+...+.++.+|+.+||.++|++||+
T Consensus 227 l~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s 306 (335)
T PTZ00024 227 LLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERIS 306 (335)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccC
Confidence 9986 33333222211111 00000 00 12234677889999999999999999
Q ss_pred HHHHhhhhhhhhhhc
Q 001366 576 TREILQSEVTNEFQE 590 (1092)
Q Consensus 576 a~eiL~~~~~~~~~~ 590 (1092)
+.|+|.||||.....
T Consensus 307 ~~~~l~~~~~~~~~~ 321 (335)
T PTZ00024 307 AKEALKHEYFKSDPL 321 (335)
T ss_pred HHHHhcCcccCCCCC
Confidence 999999999987543
No 414
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.93 E-value=9e-26 Score=246.22 Aligned_cols=239 Identities=15% Similarity=0.188 Sum_probs=172.1
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.++.|.||++.... .+..++.|+...... .......++..++...+||+++.+......+..
T Consensus 10 ~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~------------- 71 (253)
T cd05122 10 KGGFGEVYKARHKR----TGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDE------------- 71 (253)
T ss_pred cCCceEEEEEEECC----CCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCe-------------
Confidence 34679999998742 133444444422222 233344455566777789998876554333221
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
..++++|+.|++|.+++......++...+..++.|++.+|.|||.+|++|+||+|+||+++.++.++|+|||.+...
T Consensus 72 ---~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~ 148 (253)
T cd05122 72 ---LWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQL 148 (253)
T ss_pred ---EEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccc
Confidence 12479999999999999776556888899999999999999999999999999999999999999999999987654
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
....
T Consensus 149 ~~~~---------------------------------------------------------------------------- 152 (253)
T cd05122 149 SDTK---------------------------------------------------------------------------- 152 (253)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 3100
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALA 536 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~ 536 (1092)
. .....|+..|+|||.+.+..++.++|+|||||++|+|+++ |.......
T Consensus 153 -------------------------~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 204 (253)
T cd05122 153 -------------------------A---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK 204 (253)
T ss_pred -------------------------c---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH
Confidence 0 0134567789999999988899999999999999999986 33321222
Q ss_pred HHHHhccccCCCCCCCC--CChhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001366 537 AAMSDLRDRILPPSFLS--ENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1092)
Q Consensus 537 ~~~~~~~~~~~p~~~~~--~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~ 584 (1092)
....... ...+..... .+..+.+|+.+||..+|++|||+.++|+|||
T Consensus 205 ~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 205 ALFKIAT-NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHHHHh-cCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 2211111 222211111 2677899999999999999999999999998
No 415
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.93 E-value=8e-26 Score=260.98 Aligned_cols=251 Identities=17% Similarity=0.221 Sum_probs=171.7
Q ss_pred ccccceeeeCCCCCcccccccccccccccc-ccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVT-TTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.++.|.||++.... .+..++.|.... ...........++...+...+|||++.+.+......... .....
T Consensus 27 ~G~~g~v~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~-----~~~~~ 97 (345)
T cd07877 27 SGAYGSVCAAFDTK----TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE-----EFNDV 97 (345)
T ss_pred ecCCeEEEEEEEcC----CCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccc-----ccccE
Confidence 45789999997522 244555544322 111222233445667788889999997655432111100 00011
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
| +.+++.|++|.++++.. .++...++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++.
T Consensus 98 ~------lv~~~~~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~ 169 (345)
T cd07877 98 Y------LVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 169 (345)
T ss_pred E------EEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccc
Confidence 1 34445689999988654 477888999999999999999999999999999999999999999999998765
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
...
T Consensus 170 ~~~----------------------------------------------------------------------------- 172 (345)
T cd07877 170 TDD----------------------------------------------------------------------------- 172 (345)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 320
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
......++++|+|||.+.+ ..++.++|||||||++|||+++ |.....
T Consensus 173 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~ 223 (345)
T cd07877 173 -----------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 223 (345)
T ss_pred -----------------------------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 0013457889999999877 5688999999999999999986 432211
Q ss_pred HHHHHHhcc--c----------------------cCCC-----CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 535 LAAAMSDLR--D----------------------RILP-----PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 535 ~~~~~~~~~--~----------------------~~~p-----~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
.......++ . ...| ..+...++.+.+|+.+||+++|.+||++.++|.||||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f 303 (345)
T cd07877 224 IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 303 (345)
T ss_pred HHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhh
Confidence 111100000 0 0001 1122457788999999999999999999999999999
Q ss_pred hhhhccch
Q 001366 586 NEFQEVCA 593 (1092)
Q Consensus 586 ~~~~~~~~ 593 (1092)
.....+..
T Consensus 304 ~~~~~~~~ 311 (345)
T cd07877 304 AQYHDPDD 311 (345)
T ss_pred hhcCCCCc
Confidence 87655444
No 416
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.93 E-value=3.2e-26 Score=260.03 Aligned_cols=249 Identities=17% Similarity=0.169 Sum_probs=169.5
Q ss_pred ccccceeeeCCCCCcccccccccccccccccc--CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTT--MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||+|..... ..+..++.|++.... .........++..++...+|||++.+......... ...
T Consensus 10 ~g~~g~v~~~~~~~~--~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------~~~- 79 (316)
T cd07842 10 RGTYGRVYKAKRKNG--KDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHAD-------KSV- 79 (316)
T ss_pred cCCcEEEEEEEecCC--CCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCC-------ceE-
Confidence 457899999998431 124566666554321 11112334455667888899999987665443210 011
Q ss_pred ccccCCCcccccCCCCCHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc----CCcEE
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNAR----GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ----SNQVK 369 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~----~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~----~~~vk 369 (1092)
..+|||+++ +|.+++... ...++...++.++.||+.||+|||++||+||||||+||+++. ++.+|
T Consensus 80 ------~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~k 152 (316)
T cd07842 80 ------YLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVK 152 (316)
T ss_pred ------EEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEE
Confidence 137888875 777777432 225677789999999999999999999999999999999999 89999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
++|||+++.......
T Consensus 153 l~Dfg~~~~~~~~~~----------------------------------------------------------------- 167 (316)
T cd07842 153 IGDLGLARLFNAPLK----------------------------------------------------------------- 167 (316)
T ss_pred ECCCccccccCCCcc-----------------------------------------------------------------
Confidence 999998876431100
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~ 528 (1092)
.........+|.+|+|||.+.+ ..++.++|||||||+||||+++
T Consensus 168 -----------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~ 212 (316)
T cd07842 168 -----------------------------------PLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTL 212 (316)
T ss_pred -----------------------------------cccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhc
Confidence 0000113467899999998877 4579999999999999999985
Q ss_pred ---CCcHHH------------HHHHHHhc------------------------cccCCCC--------CCCCCChhHHHH
Q 001366 529 ---FDSERA------------LAAAMSDL------------------------RDRILPP--------SFLSENPKEAGF 561 (1092)
Q Consensus 529 ---f~~~~~------------~~~~~~~~------------------------~~~~~p~--------~~~~~~~~~~~l 561 (1092)
|..... .......+ .....+. .....++++.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (316)
T cd07842 213 EPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDL 292 (316)
T ss_pred CCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHH
Confidence 321111 00000000 0000010 001456778899
Q ss_pred HHhccccCCCCCCCHHHHhhhhhh
Q 001366 562 CLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 562 i~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
+.+||++||++|||+.|+++||||
T Consensus 293 i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 293 LRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHHHhcCCcccCcCHHHHhcCCCC
Confidence 999999999999999999999998
No 417
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.93 E-value=1.3e-25 Score=250.74 Aligned_cols=244 Identities=16% Similarity=0.056 Sum_probs=169.6
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..+|.|+||+|...+.-......++.|+..............++...+....|||++.++..... ...
T Consensus 16 g~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~----------- 83 (279)
T cd05057 16 GSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV----------- 83 (279)
T ss_pred cCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce-----------
Confidence 34578999998753211111112333333222222233344556667788899999986655432 111
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
..+|||+.|++|.+++......+++..++.++.||+.||+|||++||+||||||+||+++..+.+|++|||+++.
T Consensus 84 -----~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 84 -----QLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred -----EEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccccc
Confidence 137999999999999987666688889999999999999999999999999999999999999999999998876
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+......
T Consensus 159 ~~~~~~~------------------------------------------------------------------------- 165 (279)
T cd05057 159 LDVDEKE------------------------------------------------------------------------- 165 (279)
T ss_pred ccCcccc-------------------------------------------------------------------------
Confidence 4310000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~ 534 (1092)
.......++..|+|||.+....++.++|||||||++|||++ + |.....
T Consensus 166 ----------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 217 (279)
T cd05057 166 ----------------------------YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA 217 (279)
T ss_pred ----------------------------eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH
Confidence 00001112456999999988889999999999999999997 5 333222
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
.. ....+......+.....+..+.+++..||..+|.+||++.++++
T Consensus 218 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 218 VE-IPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred HH-HHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 21 12222222222333345688899999999999999999999876
No 418
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.93 E-value=4.2e-27 Score=246.06 Aligned_cols=248 Identities=15% Similarity=0.107 Sum_probs=189.2
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.|...|+ ..|.|||+.- ++.+..++.|-. . .+++-..-+++..++...+.|..++.+
T Consensus 35 FDi~~KLGEGSYGSV~KAIH----~EsG~v~AIK~V-P--V~sDLQEIIKEISIMQQC~S~yVVKYY------------- 94 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIH----RESGHVLAIKKV-P--VDTDLQEIIKEISIMQQCKSKYVVKYY------------- 94 (502)
T ss_pred HHHHHHhcCCcchHHHHHHH----hccCcEEEEEec-C--ccchHHHHHHHHHHHHHcCCchhhhhh-------------
Confidence 56665555 5799999876 444555555322 2 234445566777778888888766522
Q ss_pred cCCCCCcccc--CCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 292 RTGVPASCWI--GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 292 ~~~~~~~~~~--~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
++||. .-+++||||..|++.|.++.++..+.+.++..|++..|.||+|||...-||||||..||||.-+|..|
T Consensus 95 -----GSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AK 169 (502)
T KOG0574|consen 95 -----GSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAK 169 (502)
T ss_pred -----hhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhh
Confidence 33442 25669999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
++|||++-.+.+.- +|
T Consensus 170 LADFGVAGQLTDTM------------AK---------------------------------------------------- 185 (502)
T KOG0574|consen 170 LADFGVAGQLTDTM------------AK---------------------------------------------------- 185 (502)
T ss_pred hhhccccchhhhhH------------Hh----------------------------------------------------
Confidence 99999987755210 00
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCC
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRF 529 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f 529 (1092)
-++.+|||+|||||++..-.|+.++||||||++..||..|-
T Consensus 186 ---------------------------------------RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~ 226 (502)
T KOG0574|consen 186 ---------------------------------------RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGR 226 (502)
T ss_pred ---------------------------------------hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCC
Confidence 12678999999999999999999999999999999999874
Q ss_pred CcHHHHHHHHHhcccc-CCCCCCC---CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 530 DSERALAAAMSDLRDR-ILPPSFL---SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 530 ~~~~~~~~~~~~~~~~-~~p~~~~---~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
++-.+..-......-. ..||.|. ..+.++.+|++.||.+.|++|.||-++++|+|+...+
T Consensus 227 PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 227 PPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAP 290 (502)
T ss_pred CCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCC
Confidence 4433322222222222 2344443 2356688999999999999999999999999997653
No 419
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.5e-26 Score=261.13 Aligned_cols=249 Identities=23% Similarity=0.223 Sum_probs=174.9
Q ss_pred CCchhHHHhhhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 209 SGFSEFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 209 ~~f~~~~~~~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
.+|++-. +...+|.|.||+|...|+ ..+++|......... ...-..+...+.+.+|||++.++.-......
T Consensus 75 ~~Fs~~~-~ig~Ggfg~VYkG~l~~~-----~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~-- 145 (361)
T KOG1187|consen 75 NNFSESN-LIGEGGFGTVYKGVLSDG-----TVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGYCLEGGE-- 145 (361)
T ss_pred hCCchhc-ceecCCCeEEEEEEECCC-----CEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEEEecCCc--
Confidence 3555433 345568999999999884 445555333322221 2224556667888899999875433221110
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHhhhcC---ccccCCCCCCeEEcc
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVALVDYHHTQG---VTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~-~~~~~~~~~i~~qil~~l~~lHs~g---IvHrDLKP~Nill~~ 364 (1092)
...++.||+..|+|.++|..... .+++...+.|+.+++.||+|||... ||||||||+||||+.
T Consensus 146 -------------~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~ 212 (361)
T KOG1187|consen 146 -------------HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDE 212 (361)
T ss_pred -------------eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECC
Confidence 02458999999999999976554 7899999999999999999999854 999999999999999
Q ss_pred CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 365 ~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
+.+.|++|||+++.....
T Consensus 213 ~~~aKlsDFGLa~~~~~~-------------------------------------------------------------- 230 (361)
T KOG1187|consen 213 DFNAKLSDFGLAKLGPEG-------------------------------------------------------------- 230 (361)
T ss_pred CCCEEccCccCcccCCcc--------------------------------------------------------------
Confidence 999999999999654310
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccc-cccccccCcccccCCCCCccccchhhhHHHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQ-LEEKWYASPEELSGGVCTTSSNIYSLGVLFF 523 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ 523 (1092)
....... .||.+|++||.+..+..|.++||||+||+|.
T Consensus 231 -----------------------------------------~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvll 269 (361)
T KOG1187|consen 231 -----------------------------------------DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLL 269 (361)
T ss_pred -----------------------------------------ccceeeecCCCCccCChhhhccCCcCcccccccchHHHH
Confidence 0000122 7899999999999899999999999999999
Q ss_pred HHcCCC---Cc-----HHHHHHH-HHhcc----ccCCCCCCC-CCC------hhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 524 ELFGRF---DS-----ERALAAA-MSDLR----DRILPPSFL-SEN------PKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 524 ell~~f---~~-----~~~~~~~-~~~~~----~~~~p~~~~-~~~------~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
||+++- +. ......+ ...+. ..++.|... ... .++..+..+|++++|..||++.++++.
T Consensus 270 Elitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~ 348 (361)
T KOG1187|consen 270 ELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKE 348 (361)
T ss_pred HHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHH
Confidence 999962 11 1112222 11111 123334432 222 235688999999999999999997553
No 420
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.93 E-value=1.5e-25 Score=254.47 Aligned_cols=248 Identities=13% Similarity=0.069 Sum_probs=174.8
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
.|.+...+ ++.|.||+|.... .+..++.+........ .......++..+++...|+|++.+..........+
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 91 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVR----NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAW 91 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcC----CCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeE
Confidence 34443333 3679999998632 2344444443221111 11222335566788889999988666544332222
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
.+|+|+. ++|.+++......++..+++.++.||+.||.|||++||+||||||+||+++.++.+
T Consensus 92 ----------------lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~ 154 (308)
T cd06634 92 ----------------LVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLV 154 (308)
T ss_pred ----------------EEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcE
Confidence 3799997 58888886665667888999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
|++|||++.....
T Consensus 155 kl~dfg~~~~~~~------------------------------------------------------------------- 167 (308)
T cd06634 155 KLGDFGSASIMAP------------------------------------------------------------------- 167 (308)
T ss_pred EECCcccceeecC-------------------------------------------------------------------
Confidence 9999998754320
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC---CCCCccccchhhhHHHHHH
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---GVCTTSSNIYSLGVLFFEL 525 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~---~~~t~~sDIwSLGvll~el 525 (1092)
.....|+..|+|||.+.+ ..++.++|||||||++|||
T Consensus 168 ----------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el 207 (308)
T cd06634 168 ----------------------------------------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207 (308)
T ss_pred ----------------------------------------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHH
Confidence 002346778999999853 5678999999999999999
Q ss_pred cCCCCc---HHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 526 FGRFDS---ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 526 l~~f~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
+++..+ .......................+..+.+|+.+||.++|.+||++.+++.|||+...
T Consensus 208 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 208 AERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred HcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 986322 222222222222222222233456778999999999999999999999999999774
No 421
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.93 E-value=8.7e-26 Score=255.74 Aligned_cols=261 Identities=15% Similarity=0.164 Sum_probs=171.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.++.|+||++.... .+..++.|+...... ........++..++...+|||++.+.+......... .......
T Consensus 18 ~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~-~~~~~~~-- 90 (311)
T cd07866 18 EGTFGEVYKARQIK----TGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKS-KRKRGSV-- 90 (311)
T ss_pred cCCCEEEEEEEECC----CCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccc-cccCceE--
Confidence 34789999998632 234445544322211 111123345666788889999998765433211110 0000111
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
..+|+|+.+ +|.+++...+..++..+++.++.||++||+|||++||+||||||+||+++.++.+|++|||+++.
T Consensus 91 -----~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 164 (311)
T cd07866 91 -----YMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARP 164 (311)
T ss_pred -----EEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchh
Confidence 136777765 78888766666788889999999999999999999999999999999999999999999999876
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
........ . .
T Consensus 165 ~~~~~~~~---------------------------------------------------------------~-----~-- 174 (311)
T cd07866 165 YDGPPPNP---------------------------------------------------------------K-----G-- 174 (311)
T ss_pred ccCCCccc---------------------------------------------------------------c-----c--
Confidence 44111000 0 0
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCCCCc---HHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDS---ERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~f~~---~~~ 534 (1092)
.........+...|+++|+|||.+.+ ..++.++|||||||++|||+++.+. ...
T Consensus 175 ----------------------~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~ 232 (311)
T cd07866 175 ----------------------GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSD 232 (311)
T ss_pred ----------------------CCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCH
Confidence 00000112235678999999998876 4579999999999999999997332 222
Q ss_pred HHHH--HHhccccC----------------------CC----CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 535 LAAA--MSDLRDRI----------------------LP----PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 535 ~~~~--~~~~~~~~----------------------~p----~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
.... +....... .+ ..+....+.+.+|+.+||..+|.+|||+.|++.||||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 233 IDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 1111 11100000 01 1123345678899999999999999999999999997
No 422
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.93 E-value=9.9e-26 Score=258.70 Aligned_cols=256 Identities=16% Similarity=0.196 Sum_probs=169.3
Q ss_pred cccceeeeCCCCCccccccccccccccccc-cCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTT-TMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
++.|+||++...+.. . +..++.|..... ..........++..++... .|||++..+.........
T Consensus 11 G~~g~vy~~~~~~~~-~-~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~----------- 77 (332)
T cd07857 11 GAYGIVCSARNAETS-E-EETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGN----------- 77 (332)
T ss_pred cCCeEEEEEEeCCCC-c-CceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecccc-----------
Confidence 478999999974310 0 334455443211 1111122233444455555 699999865543211000
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
+.....+|+++. ++|.+++.... .++..+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+++.
T Consensus 78 -~~~~~~~~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 78 -FNELYLYEELME-ADLHQIIRSGQ-PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred -CCcEEEEEeccc-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 011112466664 69999996543 577889999999999999999999999999999999999999999999999876
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+......
T Consensus 155 ~~~~~~~------------------------------------------------------------------------- 161 (332)
T cd07857 155 FSENPGE------------------------------------------------------------------------- 161 (332)
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 4410000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
........+||..|+|||.+.+ ..++.++|||||||++|+|+++ |.....
T Consensus 162 --------------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~ 215 (332)
T cd07857 162 --------------------------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDY 215 (332)
T ss_pred --------------------------ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCH
Confidence 0001124578999999998766 5689999999999999999986 332211
Q ss_pred HHHH---HH-----------------------hccc---cCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 535 LAAA---MS-----------------------DLRD---RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 535 ~~~~---~~-----------------------~~~~---~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
.... +. .... ..++......++.+.+|+.+||+++|.+|||+.+++.|||+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~ 295 (332)
T cd07857 216 VDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYL 295 (332)
T ss_pred HHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhh
Confidence 1110 00 0000 01111223346788999999999999999999999999999
Q ss_pred hhhhcc
Q 001366 586 NEFQEV 591 (1092)
Q Consensus 586 ~~~~~~ 591 (1092)
.+..++
T Consensus 296 ~~~~~~ 301 (332)
T cd07857 296 AIWHDP 301 (332)
T ss_pred hhhcCc
Confidence 876543
No 423
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.93 E-value=1.3e-25 Score=248.79 Aligned_cols=246 Identities=15% Similarity=0.071 Sum_probs=172.7
Q ss_pred ccccceeeeCCCCCcccccccccccccccccc----CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTT----MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
.+|.|.||+|... ..+..++.|+..... .........++...+...+|||++.+......... ..
T Consensus 12 ~g~~g~v~~~~~~----~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~-------~~ 80 (264)
T cd06653 12 RGAFGEVYLCYDA----DTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEE-------KK 80 (264)
T ss_pred cCCCeEEEEEEEc----CCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCC-------CE
Confidence 3578999999763 234555555432111 11112233345567788899999876554221100 00
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
...+|||+.|++|.+++...+. ++...++.++.||+.||.|||++||+|+||||+||+++.++.++++|||+
T Consensus 81 -------~~~v~e~~~~~~L~~~~~~~~~-l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~ 152 (264)
T cd06653 81 -------LSIFVEYMPGGSIKDQLKAYGA-LTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGA 152 (264)
T ss_pred -------EEEEEEeCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccc
Confidence 1137899999999999976654 66778999999999999999999999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++.......
T Consensus 153 ~~~~~~~~~----------------------------------------------------------------------- 161 (264)
T cd06653 153 SKRIQTICM----------------------------------------------------------------------- 161 (264)
T ss_pred ccccccccc-----------------------------------------------------------------------
Confidence 876431000
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcH
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
.....+...|+..|+|||.+.+..++.++|+|||||++|||+++ |...
T Consensus 162 -----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 212 (264)
T cd06653 162 -----------------------------SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEY 212 (264)
T ss_pred -----------------------------cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence 00001134578889999999988889999999999999999986 3333
Q ss_pred HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 533 RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 533 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
...............+......++.+.+|+..||. +|..||++.+++.|||.
T Consensus 213 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 213 EAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred CHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 33333333333222222233456889999999998 57999999999999984
No 424
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.93 E-value=1.3e-25 Score=247.26 Aligned_cols=231 Identities=16% Similarity=0.149 Sum_probs=168.0
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
++.|+||++...+ ..++.|....... ......++..+++..+|+|++..+.........
T Consensus 17 g~~g~v~~~~~~~------~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~------------- 75 (256)
T cd05039 17 GEFGDVMLGDYRG------QKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPL------------- 75 (256)
T ss_pred CCCceEEEEEecC------cEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCe-------------
Confidence 4679999998743 3445544433222 334455666778888999998765554322222
Q ss_pred cCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
..+|||+.+++|.++++... ..++...++.++.|++.||.|||++||+||||||+||+++.++.+|++|||.++..
T Consensus 76 ---~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~ 152 (256)
T cd05039 76 ---YIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEA 152 (256)
T ss_pred ---EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccc
Confidence 23899999999999997654 25788899999999999999999999999999999999999999999999988664
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
....
T Consensus 153 ~~~~---------------------------------------------------------------------------- 156 (256)
T cd05039 153 SQGQ---------------------------------------------------------------------------- 156 (256)
T ss_pred cccc----------------------------------------------------------------------------
Confidence 2100
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~ 535 (1092)
....++..|+|||.+.+..++.++|||||||++|||++ + |.... .
T Consensus 157 ------------------------------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-~ 205 (256)
T cd05039 157 ------------------------------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-L 205 (256)
T ss_pred ------------------------------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC-H
Confidence 01112345999999988889999999999999999986 4 32221 1
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
......+.....+......++.+.+|+.+||.++|++||++.+++..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 252 (256)
T cd05039 206 KDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ 252 (256)
T ss_pred HHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 22222222222222233456888999999999999999999999863
No 425
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.93 E-value=9.7e-26 Score=259.95 Aligned_cols=248 Identities=17% Similarity=0.213 Sum_probs=170.7
Q ss_pred cccceeeeCCCCCccccccccccccccccc-cCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTT-TMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
++.|.||+|... ..+..++.|..... ..........++..+++..+|||++.+........... .
T Consensus 26 g~~g~v~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~----------~ 91 (342)
T cd07879 26 GAYGSVCSAIDK----RTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGD----------E 91 (342)
T ss_pred cCCeEEEEEEeC----CCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCC----------C
Confidence 578999999752 22445555443221 11111223345667788889999997665533222111 0
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
+.....+|+|+. .+|.+++. ..++..++..++.||+.||+|||++||+||||||+||+++.++.+|++|||+++..
T Consensus 92 ~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~ 167 (342)
T cd07879 92 FQDFYLVMPYMQ-TDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHA 167 (342)
T ss_pred CceEEEEecccc-cCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence 011124677775 47877653 34777789999999999999999999999999999999999999999999987642
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
..
T Consensus 168 ~~------------------------------------------------------------------------------ 169 (342)
T cd07879 168 DA------------------------------------------------------------------------------ 169 (342)
T ss_pred CC------------------------------------------------------------------------------
Confidence 20
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
......+|++|+|||.+.+ ..++.++|||||||+||||++| |......
T Consensus 170 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~ 221 (342)
T cd07879 170 ----------------------------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL 221 (342)
T ss_pred ----------------------------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 0013456888999999877 5689999999999999999986 4433221
Q ss_pred HHHHHhccc------------------------cCCC-----CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001366 536 AAAMSDLRD------------------------RILP-----PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1092)
Q Consensus 536 ~~~~~~~~~------------------------~~~p-----~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~ 586 (1092)
......+.. ...+ ..++..++++.+|+.+||+.||.+||++.++|.||||.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~ 301 (342)
T cd07879 222 DQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFD 301 (342)
T ss_pred HHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchh
Confidence 111111100 0001 11234567889999999999999999999999999998
Q ss_pred hhhccc
Q 001366 587 EFQEVC 592 (1092)
Q Consensus 587 ~~~~~~ 592 (1092)
..+...
T Consensus 302 ~~~~~~ 307 (342)
T cd07879 302 SFRDAD 307 (342)
T ss_pred hccccc
Confidence 876543
No 426
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.93 E-value=2.1e-25 Score=248.33 Aligned_cols=244 Identities=16% Similarity=0.085 Sum_probs=168.8
Q ss_pred ccccceeeeCCCCCccc-cccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFK-ERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.+|.|.||++....... .....++.|+...............+..++....|||++.++.........+
T Consensus 15 ~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~---------- 84 (275)
T cd05046 15 RGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY---------- 84 (275)
T ss_pred ccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce----------
Confidence 35789999998532110 1122333444422222212233445566788889999988665433222222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcC--------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARG--------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~--------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
.+|||++|++|.++|.... ..++...++.++.||+.||.|||++||+||||||+||+++..+.+++
T Consensus 85 ------lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l 158 (275)
T cd05046 85 ------MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKV 158 (275)
T ss_pred ------EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEE
Confidence 3899999999999997644 14778899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++......
T Consensus 159 ~~~~~~~~~~~~~------------------------------------------------------------------- 171 (275)
T cd05046 159 SLLSLSKDVYNSE------------------------------------------------------------------- 171 (275)
T ss_pred cccccccccCccc-------------------------------------------------------------------
Confidence 9999876432100
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~- 528 (1092)
........++..|+|||.+.+..++.++|||||||++|+|++ +
T Consensus 172 -----------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~ 216 (275)
T cd05046 172 -----------------------------------YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGE 216 (275)
T ss_pred -----------------------------------ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 000012345667999999988888999999999999999997 3
Q ss_pred --CCcHHHHHHHHHhccccCC-CCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 --FDSERALAAAMSDLRDRIL-PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|....... .........+ .+.....++.+.+++.+||..+|.+||++.+++..
T Consensus 217 ~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 217 LPFYGLSDEE-VLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred CCccccchHH-HHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 43222222 2222222222 22233456788999999999999999999999874
No 427
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.93 E-value=1.4e-25 Score=250.07 Aligned_cols=243 Identities=16% Similarity=0.203 Sum_probs=171.5
Q ss_pred hccccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..++.|.||+|...+ .++.++.|+...... .........+...+...+|++++.+..........
T Consensus 8 g~g~~~~vy~~~~~~----~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~---------- 73 (282)
T cd07829 8 GEGTYGVVYKARDKK----TGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKL---------- 73 (282)
T ss_pred cccCcceEEEeeecC----CCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCce----------
Confidence 345789999998743 245555555543321 11222333455566777899988755543322111
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
..+++|+.+ +|.++|......++...++.++.||+.||.|||++||+||||+|+||+++.++.+|++|||+++
T Consensus 74 ------~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~ 146 (282)
T cd07829 74 ------YLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLAR 146 (282)
T ss_pred ------EEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCccc
Confidence 137888885 9999998765568888999999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
......
T Consensus 147 ~~~~~~-------------------------------------------------------------------------- 152 (282)
T cd07829 147 AFGIPL-------------------------------------------------------------------------- 152 (282)
T ss_pred ccCCCc--------------------------------------------------------------------------
Confidence 543100
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
.......++.+|+|||.+.+. .++.++|||||||++|||+++ |....
T Consensus 153 -----------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 203 (282)
T cd07829 153 -----------------------------RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDS 203 (282)
T ss_pred -----------------------------cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCcc
Confidence 001123456789999998876 789999999999999999986 33322
Q ss_pred HHHHHHHhcc-------------------ccCCC--------CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 534 ALAAAMSDLR-------------------DRILP--------PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 534 ~~~~~~~~~~-------------------~~~~p--------~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
.......... ....+ ..++..++.+.+|+..||..+|++||++.+++.||||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 204 EIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred HHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 2211111000 00111 1123346778999999999999999999999999997
No 428
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.93 E-value=1.4e-25 Score=245.68 Aligned_cols=241 Identities=17% Similarity=0.192 Sum_probs=175.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.++.|.||++...+ .+..++.|.+...... .....-.++..++...+||+++.+..........+
T Consensus 10 ~g~~~~v~~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~---------- 75 (254)
T cd06627 10 RGAFGVVYKGLNLE----TGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLY---------- 75 (254)
T ss_pred ccCCeEEEEEEEcC----CCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEE----------
Confidence 34679999986532 1344555544333221 22233445556677778999887665544322222
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
++|+|++|++|.+++... ..+++..+..++.|++.+|.|||++||+||||||+||+++.++.++++|||++..
T Consensus 76 ------~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~ 148 (254)
T cd06627 76 ------IILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATK 148 (254)
T ss_pred ------EEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEecccccee
Confidence 379999999999999776 3578889999999999999999999999999999999999999999999998876
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
......
T Consensus 149 ~~~~~~-------------------------------------------------------------------------- 154 (254)
T cd06627 149 LNDVSK-------------------------------------------------------------------------- 154 (254)
T ss_pred cCCCcc--------------------------------------------------------------------------
Confidence 441000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
......++..|+|||.+.+..++.++||||||+++|+|+++ |......
T Consensus 155 -----------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~ 205 (254)
T cd06627 155 -----------------------------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM 205 (254)
T ss_pred -----------------------------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH
Confidence 00133567789999999888889999999999999999986 3332322
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
....... ....++.....++.+.+|+.+||.++|++||++.+++.||||
T Consensus 206 ~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 206 AALFRIV-QDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHHHHh-ccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 2222222 223333334457889999999999999999999999999997
No 429
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=1.3e-24 Score=237.81 Aligned_cols=274 Identities=24% Similarity=0.362 Sum_probs=214.7
Q ss_pred EEEEEcccceEEeeEEeeeecCCCCCEEEEEEcC-------CCCEEEEEeCCCcEEEEEcCCCCCCCcccccce------
Q 001366 756 CKYARYSKFEVQGMLRTGEFNNSANVICSISFDR-------DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPA------ 822 (1092)
Q Consensus 756 ~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fsp-------dg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~------ 822 (1092)
+-+|-|..- ....+.++++.-..-++| ++|.- -|+|+|.|..|..|.|||+.-. +...|.
T Consensus 152 LEvYVyn~~-e~nlYvHHD~ilpafPLC-~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~-----d~v~P~~~LGs~ 224 (463)
T KOG0270|consen 152 LEVYVYNEE-EENLYVHHDFILPAFPLC-IEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIV-----DAVLPCVTLGSK 224 (463)
T ss_pred EEEEEEcCC-CcceeEecceeccCcchh-hhhhhcCCCCCCCcceEEEeccCceeEEeccccc-----cccccceeechh
Confidence 445555432 245556666655555554 56642 3789999999999999998631 111121
Q ss_pred -------------eeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEE
Q 001366 823 -------------VEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLAS 889 (1092)
Q Consensus 823 -------------~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laS 889 (1092)
...+|+..|..++|+....+.|||||.|.||++||+.+|++..++..|++.|.++.|+|..+..|++
T Consensus 225 ~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLs 304 (463)
T KOG0270|consen 225 ASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLS 304 (463)
T ss_pred hhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEe
Confidence 1235888899999999888999999999999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEecCCCc-eeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc--
Q 001366 890 GSDDCSVKLWNINEKN-SLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-- 966 (1092)
Q Consensus 890 gs~Dg~I~iWDl~~~~-~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-- 966 (1092)
||.|++|.+.|+|... .-..++..+.|-.++|+|...+.++++..||+|+-+|+|+...++.++.+|...|++|+++
T Consensus 305 Gs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~ 384 (463)
T KOG0270|consen 305 GSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQ 384 (463)
T ss_pred ccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCC
Confidence 9999999999999533 3345667788999999999999999999999999999999988999999999999999997
Q ss_pred CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCC-EEEEEecCCcEEEEeCCCCCcee
Q 001366 967 DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADG-YIACGSESNEVYAYHRSLPMPIT 1042 (1092)
Q Consensus 967 ~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~-~lasgs~Dg~I~Iwd~~~~~~i~ 1042 (1092)
..+.++|++.|+++++|++....... ...+.+. -....|.++.|+-. ++|.|+..+.++|||+.+..++.
T Consensus 385 ~p~~l~t~s~d~~Vklw~~~~~~~~~----v~~~~~~--~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~ 455 (463)
T KOG0270|consen 385 TPGLLSTASTDKVVKLWKFDVDSPKS----VKEHSFK--LGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVR 455 (463)
T ss_pred CCcceeeccccceEEEEeecCCCCcc----ccccccc--ccceeecccCCCcceEEEecCccceEEEeecccChhHH
Confidence 66789999999999999998533211 0011111 11244556777644 67888888899999988776654
No 430
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.93 E-value=9.9e-26 Score=252.36 Aligned_cols=243 Identities=15% Similarity=0.179 Sum_probs=171.8
Q ss_pred ccccceeeeCCCCCccccccccccccccccc-cCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTT-TMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.++.|.||++...+ .++.++.|++... ..........++...+....|+|++.+++....+...+
T Consensus 11 ~g~~~~v~~~~~~~----~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~---------- 76 (288)
T cd07833 11 EGAYGVVLKCRNKA----TGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLY---------- 76 (288)
T ss_pred ccCCeeEEEEEeCC----CCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEE----------
Confidence 35779999987633 2344555544221 12222233445566777788999998776655433333
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+|||++++.|..++... ..++..++..++.||+.||.|||++||+||||||+||+++.++.+|++|||++..
T Consensus 77 ------iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~ 149 (288)
T cd07833 77 ------LVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARA 149 (288)
T ss_pred ------EEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccc
Confidence 379999997777666544 3477779999999999999999999999999999999999999999999998866
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
......
T Consensus 150 ~~~~~~-------------------------------------------------------------------------- 155 (288)
T cd07833 150 LRARPA-------------------------------------------------------------------------- 155 (288)
T ss_pred cCCCcc--------------------------------------------------------------------------
Confidence 441000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
.......++.+|+|||.+.+. .++.++|||||||+||+|+++ |.....
T Consensus 156 ----------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~ 207 (288)
T cd07833 156 ----------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSD 207 (288)
T ss_pred ----------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 001134678899999999887 789999999999999999986 332222
Q ss_pred HHHHHHhcc--------------------ccCCCC---------CCCC-CChhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001366 535 LAAAMSDLR--------------------DRILPP---------SFLS-ENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1092)
Q Consensus 535 ~~~~~~~~~--------------------~~~~p~---------~~~~-~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~ 584 (1092)
......... ...+++ .++. .++++.+|+.+||.++|++||+++++++|||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 287 (288)
T cd07833 208 IDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPY 287 (288)
T ss_pred HHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCC
Confidence 111111000 000010 1112 2677899999999999999999999999999
Q ss_pred h
Q 001366 585 T 585 (1092)
Q Consensus 585 ~ 585 (1092)
|
T Consensus 288 f 288 (288)
T cd07833 288 F 288 (288)
T ss_pred C
Confidence 7
No 431
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=6.8e-26 Score=278.40 Aligned_cols=242 Identities=18% Similarity=0.203 Sum_probs=183.5
Q ss_pred cccceeeeCCCCCccccccccccccccccccCch--hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS--DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
+-+|+||+|...+.--. ...+++++|...-.-+ ....-.++..++...+||||++++.......+..
T Consensus 703 G~FG~VY~g~~~~~~~~-~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~---------- 771 (1025)
T KOG1095|consen 703 GAFGEVYEGTYSDVPGS-VSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL---------- 771 (1025)
T ss_pred ccccceEEEEEecCCCC-ccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE----------
Confidence 35799999998763322 2255666665444422 2333455566677889999998776655444444
Q ss_pred cccCCCcccccCCCCCHHHHHhhc------CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEec
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNAR------GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIG 372 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~------~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~D 372 (1092)
+++||++||+|..+|+.. ...+...+.+.++.||+.|..||+++++|||||-..|+||+....|||+|
T Consensus 772 ------i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaD 845 (1025)
T KOG1095|consen 772 ------ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIAD 845 (1025)
T ss_pred ------EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcc
Confidence 489999999999999887 66788889999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCC
Q 001366 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1092)
Q Consensus 373 fg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 452 (1092)
||+||++-+...+.. .|
T Consensus 846 FGlArDiy~~~yyr~----------------------------------------------~~----------------- 862 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRK----------------------------------------------HG----------------- 862 (1025)
T ss_pred cchhHhhhhchheec----------------------------------------------cC-----------------
Confidence 999997653221100 00
Q ss_pred CCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC----C
Q 001366 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG----R 528 (1092)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~----~ 528 (1092)
...---.|||||.+.++.+|.++|||||||+|||+|+ |
T Consensus 863 --------------------------------------~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~P 904 (1025)
T KOG1095|consen 863 --------------------------------------EAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATP 904 (1025)
T ss_pred --------------------------------------ccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCC
Confidence 0000123899999999999999999999999999997 4
Q ss_pred CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 529 FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 529 f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
|+...........++...+++.. -+..++-+++..||+.+|++||+++.|++
T Consensus 905 Y~~~~n~~v~~~~~~ggRL~~P~-~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 905 YPSRSNFEVLLDVLEGGRLDPPS-YCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred CCCcchHHHHHHHHhCCccCCCC-CCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 66665555555456665554332 33566779999999999999999999987
No 432
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.93 E-value=1.7e-25 Score=249.86 Aligned_cols=248 Identities=15% Similarity=0.076 Sum_probs=171.3
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+|.|.||++...+.-...+..++.|+............-..+...+....|||++............ .
T Consensus 15 g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~-------~----- 82 (284)
T cd05038 15 GHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR-------S----- 82 (284)
T ss_pred CCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC-------c-----
Confidence 5789999998643212224556666553322221233444555677888999998765433221110 0
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
...+|||++|++|.+++......++...++.++.||+.||+|||++||+||||||+||+++.++.++++|||+++...
T Consensus 83 --~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 83 --LRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred --eEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 123799999999999998766568888999999999999999999999999999999999999999999999887644
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
.....
T Consensus 161 ~~~~~--------------------------------------------------------------------------- 165 (284)
T cd05038 161 EDKDY--------------------------------------------------------------------------- 165 (284)
T ss_pred cCCcc---------------------------------------------------------------------------
Confidence 10000
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcHHH------
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA------ 534 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~~~------ 534 (1092)
........++..|+|||.+.+..++.++|||||||++|||+++..+...
T Consensus 166 -------------------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~ 220 (284)
T cd05038 166 -------------------------YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFL 220 (284)
T ss_pred -------------------------eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhc
Confidence 0000011234459999999888899999999999999999986322110
Q ss_pred -----------HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 535 -----------LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 535 -----------~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
.......+......+.....+.++.+|+.+||.++|.+||++.||++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05038 221 RMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILI 279 (284)
T ss_pred cccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 111111112222222233445788999999999999999999999863
No 433
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.93 E-value=1.1e-25 Score=280.37 Aligned_cols=140 Identities=19% Similarity=0.151 Sum_probs=104.7
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCc-h-hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-S-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.++.|.||++.... .+..++.|++...... . ......++..++...+||+|+.++.........+
T Consensus 14 ~G~fg~Vy~a~~~~----~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~--------- 80 (669)
T cd05610 14 RGAFGKVYLGRKKN----NSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVY--------- 80 (669)
T ss_pred cCCCeEEEEEEECC----CCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEE---------
Confidence 34789999998732 2455666655322211 1 1123344555677789999998765443322222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++|||+.|++|.++|...+ .++...++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++
T Consensus 81 -------lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 81 -------LVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred -------EEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 3899999999999997654 46777899999999999999999999999999999999999999999999998
Q ss_pred ccc
Q 001366 378 ETL 380 (1092)
Q Consensus 378 ~~~ 380 (1092)
...
T Consensus 153 ~~~ 155 (669)
T cd05610 153 VTL 155 (669)
T ss_pred ccc
Confidence 653
No 434
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=4.6e-24 Score=245.39 Aligned_cols=270 Identities=16% Similarity=0.246 Sum_probs=222.9
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceE
Q 001366 785 ISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTV 864 (1092)
Q Consensus 785 l~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i 864 (1092)
++|+ ..+.||+|. ...|++|+..... ......++ ...|+++.|+++ +.+|++|..+|+|.|||+.+.+.+
T Consensus 183 ldWs-s~n~laVal-g~~vylW~~~s~~------v~~l~~~~-~~~vtSv~ws~~-G~~LavG~~~g~v~iwD~~~~k~~ 252 (484)
T KOG0305|consen 183 LDWS-SANVLAVAL-GQSVYLWSASSGS------VTELCSFG-EELVTSVKWSPD-GSHLAVGTSDGTVQIWDVKEQKKT 252 (484)
T ss_pred hhcc-cCCeEEEEe-cceEEEEecCCCc------eEEeEecC-CCceEEEEECCC-CCEEEEeecCCeEEEEehhhcccc
Confidence 6788 455777775 4589999976521 11122222 789999999998 999999999999999999999999
Q ss_pred EEeec-cCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeee-Ee-cCCceEEEEEccCCCeEEEEEECCCeEEEE
Q 001366 865 SHYIE-HEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLAT-IK-NIANVCCVQFSAHSSHLLAFGSADYRTYCY 941 (1092)
Q Consensus 865 ~~l~~-h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~-l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vw 941 (1092)
..+.+ |...|-+++|+ ...+.+|+.|+.|..+|++....... +. |...||.++|++++. ++|+|+.|+.+.||
T Consensus 253 ~~~~~~h~~rvg~laW~---~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~-~lASGgnDN~~~Iw 328 (484)
T KOG0305|consen 253 RTLRGSHASRVGSLAWN---SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGN-QLASGGNDNVVFIW 328 (484)
T ss_pred ccccCCcCceeEEEecc---CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCC-eeccCCCccceEec
Confidence 99998 99999999997 47899999999999999998876655 54 678899999999995 99999999999999
Q ss_pred EcCCCCcceEEecCCCCCeEEEEEc--CCCEEEEEE--CCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecC
Q 001366 942 DLRNARAPWCVLAGHEKAVSYVKFL--DSGTLVTAS--TDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTA 1017 (1092)
Q Consensus 942 Dlr~~~~~~~~l~~H~~~V~~v~fs--~~~~L~Sgs--~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spd 1017 (1092)
|..... +...+..|..+|.+++|+ ..+.||+|+ .|+.|++||+. .+.++..+. -...|.++.|++.
T Consensus 329 d~~~~~-p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~--------~g~~i~~vd-tgsQVcsL~Wsk~ 398 (484)
T KOG0305|consen 329 DGLSPE-PKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTN--------TGARIDSVD-TGSQVCSLIWSKK 398 (484)
T ss_pred cCCCcc-ccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcC--------CCcEecccc-cCCceeeEEEcCC
Confidence 996554 567888999999999998 567888865 79999999998 345555554 3467999999999
Q ss_pred CCEEEEEe--cCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEcC
Q 001366 1018 DGYIACGS--ESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQMV 1092 (1092)
Q Consensus 1018 g~~lasgs--~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~lv 1092 (1092)
.+-|+++- .++.|.||...+.+++. ...+|...|..++|+|||..+++|+.|.++++|+++
T Consensus 399 ~kEi~sthG~s~n~i~lw~~ps~~~~~--------------~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f 461 (484)
T KOG0305|consen 399 YKELLSTHGYSENQITLWKYPSMKLVA--------------ELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLF 461 (484)
T ss_pred CCEEEEecCCCCCcEEEEeccccceee--------------eecCCcceeEEEEECCCCCEEEEecccCcEEecccc
Confidence 86555543 57889999877644433 346889999999999999999999999999999974
No 435
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.93 E-value=1.4e-25 Score=252.91 Aligned_cols=253 Identities=17% Similarity=0.137 Sum_probs=171.5
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhh-hhhccCCCCCCCccccceecCCCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGA-MMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
+..|.+.+.++ +.|.||++...+ .+..++.|+..............++. .+.....|||++..++........
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~ 89 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKK----TGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDV 89 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECC----CCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeE
Confidence 34455555543 579999998743 23445555543222222222222223 233444689999876654433322
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhh-cCccccCCCCCCeEEccCC
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs-~gIvHrDLKP~Nill~~~~ 366 (1092)
+ .+|+|+. ++|.+++......++...+..++.||+.||.|||+ +||+||||||+||+++.++
T Consensus 90 ~----------------~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~ 152 (296)
T cd06618 90 F----------------ICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASG 152 (296)
T ss_pred E----------------EEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCC
Confidence 2 2677764 58888887655578888899999999999999997 6999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+||+|||++..+.....
T Consensus 153 ~~kL~dfg~~~~~~~~~~-------------------------------------------------------------- 170 (296)
T cd06618 153 NVKLCDFGISGRLVDSKA-------------------------------------------------------------- 170 (296)
T ss_pred CEEECccccchhccCCCc--------------------------------------------------------------
Confidence 999999998765331000
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC----CCccccchhhhHHH
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV----CTTSSNIYSLGVLF 522 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~----~t~~sDIwSLGvll 522 (1092)
.....++..|+|||.+.+.. ++.++|||||||++
T Consensus 171 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il 208 (296)
T cd06618 171 ------------------------------------------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISL 208 (296)
T ss_pred ------------------------------------------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHH
Confidence 00223567799999987643 78999999999999
Q ss_pred HHHcCC---CCcHHHHHHHH-Hhcccc-CCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 523 FELFGR---FDSERALAAAM-SDLRDR-ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 523 ~ell~~---f~~~~~~~~~~-~~~~~~-~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|||+++ |.......... ..+... ...+.....++++.+|+.+||+++|.+||++.++++||||...
T Consensus 209 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 279 (296)
T cd06618 209 VELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRY 279 (296)
T ss_pred HHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhcc
Confidence 999986 33322222222 222221 1112222357789999999999999999999999999999753
No 436
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.93 E-value=1e-24 Score=241.25 Aligned_cols=298 Identities=15% Similarity=0.194 Sum_probs=221.8
Q ss_pred hhccchhhhhhccccccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEE
Q 001366 726 LRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKI 805 (1092)
Q Consensus 726 l~~~~~~~~~~~~~~~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~I 805 (1092)
+.++.-++.++.. +.+....+++++|-++++|++......-..-..........|++++|++.|..|++.+....++|
T Consensus 163 l~hgtk~Vsal~~--Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl 240 (641)
T KOG0772|consen 163 LKHGTKIVSALAV--DPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKL 240 (641)
T ss_pred ccCCceEEEEeee--cCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeE
Confidence 4555556666543 23333456889999999999976654321111112245568999999999999999998999999
Q ss_pred EEcCCCCCC-----CcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCc-eEEEee-----ccCccE
Q 001366 806 FEFNALFND-----SVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ-TVSHYI-----EHEKRA 874 (1092)
Q Consensus 806 wd~~~~~~~-----~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~-~i~~l~-----~h~~~V 874 (1092)
+|-+..... ..-........+|...++|.+|+|.+...++||++||++||||+...+ .+..++ +..-++
T Consensus 241 ~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~ 320 (641)
T KOG0772|consen 241 LDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPV 320 (641)
T ss_pred EccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCc
Confidence 997642111 111222345678999999999999999999999999999999998653 222222 233468
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEecCCCce--eeeEe--cC--CceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCc
Q 001366 875 WSVDFSQVHPTKLASGSDDCSVKLWNINEKNS--LATIK--NI--ANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA 948 (1092)
Q Consensus 875 ~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~--l~~l~--~~--~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~ 948 (1092)
++++|++ ++.+||+|+.||+|.+||...... ...++ |. ..|+||.|+++|+ +|++-+.|+++++||+|+.+.
T Consensus 321 tsC~~nr-dg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~-~LlSRg~D~tLKvWDLrq~kk 398 (641)
T KOG0772|consen 321 TSCAWNR-DGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGN-YLLSRGFDDTLKVWDLRQFKK 398 (641)
T ss_pred eeeecCC-CcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccc-hhhhccCCCceeeeecccccc
Confidence 9999999 899999999999999999864432 22222 43 4899999999995 899999999999999999988
Q ss_pred ceEEecCCC--CCeEEEEEcCC-CEEEEEE------CCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCC
Q 001366 949 PWCVLAGHE--KAVSYVKFLDS-GTLVTAS------TDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADG 1019 (1092)
Q Consensus 949 ~~~~l~~H~--~~V~~v~fs~~-~~L~Sgs------~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~ 1019 (1092)
++.+..+-. .+-+.++|+|. +.|++|+ ..|++.+||..+ ...++.+.-.+..|..+.|+|-=+
T Consensus 399 pL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t--------~d~v~ki~i~~aSvv~~~WhpkLN 470 (641)
T KOG0772|consen 399 PLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMT--------LDTVYKIDISTASVVRCLWHPKLN 470 (641)
T ss_pred chhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccc--------eeeEEEecCCCceEEEEeecchhh
Confidence 877765532 35577899954 5566765 357899999884 445666666678888999999877
Q ss_pred EEEEEecCCcEEEEeC
Q 001366 1020 YIACGSESNEVYAYHR 1035 (1092)
Q Consensus 1020 ~lasgs~Dg~I~Iwd~ 1035 (1092)
.|..|+.||.++||.-
T Consensus 471 Qi~~gsgdG~~~vyYd 486 (641)
T KOG0772|consen 471 QIFAGSGDGTAHVYYD 486 (641)
T ss_pred heeeecCCCceEEEEC
Confidence 8889999999999863
No 437
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.6e-26 Score=276.13 Aligned_cols=197 Identities=18% Similarity=0.134 Sum_probs=159.3
Q ss_pred CCCCCccccceecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCc
Q 001366 271 SPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGV 350 (1092)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gI 350 (1092)
.+=|+.+.-|..-+.++|+ +|+|+.||+|..+|...+ .+++..++.|...|+.||+-+|+.|+
T Consensus 134 s~Wiv~LhyAFQD~~~LYl----------------VMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgy 196 (1317)
T KOG0612|consen 134 SEWIVQLHYAFQDERYLYL----------------VMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGY 196 (1317)
T ss_pred cHHHHHHHHHhcCccceEE----------------EEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccc
Confidence 4445555555555555553 899999999999998887 67787999999999999999999999
Q ss_pred cccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccc
Q 001366 351 TFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLF 430 (1092)
Q Consensus 351 vHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (1092)
|||||||+||||+..|+||++|||.+-.+...++.
T Consensus 197 VHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V--------------------------------------------- 231 (1317)
T KOG0612|consen 197 VHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTV--------------------------------------------- 231 (1317)
T ss_pred eeccCCcceeEecccCcEeeccchhHHhcCCCCcE---------------------------------------------
Confidence 99999999999999999999999988665421110
Q ss_pred cCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC----
Q 001366 431 PSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---- 506 (1092)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~---- 506 (1092)
. -...+|||-|.|||+|..
T Consensus 232 --------------------------------------------------------~-s~~aVGTPDYISPEvLqs~~~~ 254 (1317)
T KOG0612|consen 232 --------------------------------------------------------R-SSVAVGTPDYISPEVLQSQGDG 254 (1317)
T ss_pred --------------------------------------------------------E-eccccCCCCccCHHHHHhhcCC
Confidence 0 115799999999999964
Q ss_pred -CCCCccccchhhhHHHHHHcC---CCCcHHHHHHHHHhccc---cCCCCCCCCCChhHHHHHHhccccCCCCCCC---H
Q 001366 507 -GVCTTSSNIYSLGVLFFELFG---RFDSERALAAAMSDLRD---RILPPSFLSENPKEAGFCLWQLHPEPLSRPT---T 576 (1092)
Q Consensus 507 -~~~t~~sDIwSLGvll~ell~---~f~~~~~~~~~~~~~~~---~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps---a 576 (1092)
+.|+..+|+|||||++||||+ ||..+.-...+-++..+ -.+| .....++...+||..+|+ +|+.|.. +
T Consensus 255 ~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP-~~~~VSeeakdLI~~ll~-~~e~RLgrngi 332 (1317)
T KOG0612|consen 255 KGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFP-DETDVSEEAKDLIEALLC-DREVRLGRNGI 332 (1317)
T ss_pred ccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCC-cccccCHHHHHHHHHHhc-ChhhhcccccH
Confidence 568999999999999999996 58777665555455444 3455 444589999999999996 6888988 9
Q ss_pred HHHhhhhhhhhh
Q 001366 577 REILQSEVTNEF 588 (1092)
Q Consensus 577 ~eiL~~~~~~~~ 588 (1092)
.+|..||||.+.
T Consensus 333 edik~HpFF~g~ 344 (1317)
T KOG0612|consen 333 EDIKNHPFFEGI 344 (1317)
T ss_pred HHHHhCccccCC
Confidence 999999999864
No 438
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.93 E-value=2.3e-25 Score=246.03 Aligned_cols=236 Identities=15% Similarity=0.104 Sum_probs=168.7
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..+|.|.||++...+ +..++.|........ ...-.++..++....|||++....... +.. .+
T Consensus 15 g~G~~g~v~~~~~~~-----~~~~a~K~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~---------~~- 76 (260)
T cd05067 15 GAGQFGEVWMGYYNG-----HTKVAIKSLKQGSMS--PEAFLAEANLMKQLQHPRLVRLYAVVT-QEP---------IY- 76 (260)
T ss_pred ccCccceEEeeecCC-----CceEEEEEecCCCCc--HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCC---------cE-
Confidence 345789999998754 344566554332222 122234556778889999987654321 111 11
Q ss_pred cccCCCcccccCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
.+|+|+.|++|.+++.. .+..++..+++.++.||+.||+|||+.||+||||||+||+++.++.++++|||+++
T Consensus 77 ------~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 150 (260)
T cd05067 77 ------IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLAR 150 (260)
T ss_pred ------EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCccee
Confidence 37999999999999965 34467888899999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.......
T Consensus 151 ~~~~~~~------------------------------------------------------------------------- 157 (260)
T cd05067 151 LIEDNEY------------------------------------------------------------------------- 157 (260)
T ss_pred ecCCCCc-------------------------------------------------------------------------
Confidence 5431000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSER 533 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~ 533 (1092)
.......++..|+|||.+.+..++.++|||||||++|||++ + |....
T Consensus 158 -----------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 208 (260)
T cd05067 158 -----------------------------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT 208 (260)
T ss_pred -----------------------------ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence 00002234567999999998889999999999999999997 4 43322
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
.. .....+.....++.....+..+.+|+.+||.++|++||++++++.
T Consensus 209 ~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 209 NP-EVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred hH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 22 222222222223333445678999999999999999999999876
No 439
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=5.6e-25 Score=253.77 Aligned_cols=286 Identities=22% Similarity=0.276 Sum_probs=226.6
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCC
Q 001366 781 VICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACT 860 (1092)
Q Consensus 781 ~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~t 860 (1092)
..+.|+.+++-..++.+|.. .++||.+........-.+.......-...+..|+|+....++||||+..|.|-+||+..
T Consensus 41 ~~nAIs~nr~~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk 119 (839)
T KOG0269|consen 41 KANAISVNRDINQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNK 119 (839)
T ss_pred ccceEeecCCcceeEEeccc-ceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCc
Confidence 34556677888889998865 78899876521110000000000111234567889876689999999999999999987
Q ss_pred ---CceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEec-CCceEEEEEccCCCeEEEEEECCC
Q 001366 861 ---GQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKN-IANVCCVQFSAHSSHLLAFGSADY 936 (1092)
Q Consensus 861 ---g~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~-~~~V~sl~fsp~~~~~latgs~Dg 936 (1092)
.+.+..|..|+..|.+++|++..+.+|+|||.||+||+||++..+...++.. ...|..|+|+|...+.|+++...|
T Consensus 120 ~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG 199 (839)
T KOG0269|consen 120 SIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSG 199 (839)
T ss_pred cccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCc
Confidence 4567788999999999999999999999999999999999999998888875 567999999998888999999999
Q ss_pred eEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEe
Q 001366 937 RTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLS 1015 (1092)
Q Consensus 937 ~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~s 1015 (1092)
.+++||+|........+.+|.++|.|+.|+ +..+|+||+.|++|+|||+.... ...+.++. ...+|..|.|-
T Consensus 200 ~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~------~~~~~tIn-Tiapv~rVkWR 272 (839)
T KOG0269|consen 200 YLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSR------AKPKHTIN-TIAPVGRVKWR 272 (839)
T ss_pred eEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCC------ccceeEEe-ecceeeeeeec
Confidence 999999999988888899999999999999 56689999999999999998532 23344443 35689999999
Q ss_pred cCCC-EEEEEe--cCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeC-CCCEEEEEecCCeEE
Q 001366 1016 TADG-YIACGS--ESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRR-RSDMVVAANSSGCIK 1087 (1092)
Q Consensus 1016 pdg~-~lasgs--~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~sp-d~~~Lasgs~DG~V~ 1087 (1092)
|... .||+++ .|-.|+|||+..+-.- ......|...|+.++|.. |...|.+++.||.|.
T Consensus 273 P~~~~hLAtcsmv~dtsV~VWDvrRPYIP-------------~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~ 335 (839)
T KOG0269|consen 273 PARSYHLATCSMVVDTSVHVWDVRRPYIP-------------YATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVL 335 (839)
T ss_pred cCccchhhhhhccccceEEEEeecccccc-------------ceeeeccCccccceeccCCCceeeEeecCccHHH
Confidence 9866 467666 5788999998765422 234467889999999987 667888999999863
No 440
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.93 E-value=1.5e-25 Score=257.76 Aligned_cols=259 Identities=19% Similarity=0.225 Sum_probs=175.9
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccc-cCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTT-TMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 289 (1092)
|.+.+.+ +|.|.||+|.... .+..++.|..... ..........++..++... +|||++.+.+....+...
T Consensus 9 y~~~~~lg~g~~~~v~~~~~~~----~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~-- 82 (337)
T cd07852 9 YEILQKLGKGAYGIVWKAIDRR----TKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK-- 82 (337)
T ss_pred HHHhHhhcCCCCeeEEEEEEcC----CCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc--
Confidence 4444444 4789999997632 1334444433211 1122233344566677788 999999876543211100
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
.+ ..+|||+.+ +|.+++... .+++..++.++.||+.||.|||++||+||||||+||+++.++.+|
T Consensus 83 -----~~-------~lv~e~~~~-~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~k 147 (337)
T cd07852 83 -----DI-------YLVFEYMET-DLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVK 147 (337)
T ss_pred -----eE-------EEEeccccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEE
Confidence 01 137899975 999999765 677778899999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
++|||+++.+......
T Consensus 148 l~d~g~~~~~~~~~~~---------------------------------------------------------------- 163 (337)
T cd07852 148 LADFGLARSLSELEEN---------------------------------------------------------------- 163 (337)
T ss_pred Eeeccchhcccccccc----------------------------------------------------------------
Confidence 9999988764410000
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~ 528 (1092)
..........||.+|+|||.+.+ ..++.++|||||||++|||+++
T Consensus 164 ----------------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg 209 (337)
T cd07852 164 ----------------------------------PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLG 209 (337)
T ss_pred ----------------------------------ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhC
Confidence 00011124568999999998866 5578999999999999999986
Q ss_pred ---CCcHHHHHHHH--------------------------Hhccc---cCCCCCCCCCChhHHHHHHhccccCCCCCCCH
Q 001366 529 ---FDSERALAAAM--------------------------SDLRD---RILPPSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (1092)
Q Consensus 529 ---f~~~~~~~~~~--------------------------~~~~~---~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa 576 (1092)
|.......... ..... ..+...+...++.+.+|+.+||+.+|++|||+
T Consensus 210 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~ 289 (337)
T cd07852 210 KPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTA 289 (337)
T ss_pred CCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCH
Confidence 33221111100 00000 01111223357788999999999999999999
Q ss_pred HHHhhhhhhhhhhcc
Q 001366 577 REILQSEVTNEFQEV 591 (1092)
Q Consensus 577 ~eiL~~~~~~~~~~~ 591 (1092)
.++++|||+......
T Consensus 290 ~~il~~~~~~~~~~~ 304 (337)
T cd07852 290 EEALEHPYVAQFHNP 304 (337)
T ss_pred HHHhhChhhhhhccC
Confidence 999999999876443
No 441
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.93 E-value=5.5e-26 Score=235.83 Aligned_cols=240 Identities=16% Similarity=0.142 Sum_probs=168.2
Q ss_pred cceeeeCCCCCccccccccccccccccccCchhhHhhhhhh-hhhccCCCCCCCccccceecCCCCCCCccCCCCCcccc
Q 001366 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGA-MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (1092)
Q Consensus 223 ~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (1092)
-|+|.+.... -.+..+|+|...-+.......+-.... -++.+...|.|+.-+.-.+.|....
T Consensus 105 cG~V~k~~~r----s~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~------------- 167 (391)
T KOG0983|consen 105 CGQVWKMRFR----STGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVF------------- 167 (391)
T ss_pred ccceEEEEEc----ccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHH-------------
Confidence 4777777651 123344444433332222222211111 1233445677776554444443333
Q ss_pred CCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhh-cCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 302 ~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs-~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
.-+.+.+..+..+|++-...+++..+-++..-++.||.||.. +||+|||+||+|||++..|+||++|||++-.+.
T Consensus 168 ----IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlv 243 (391)
T KOG0983|consen 168 ----ICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV 243 (391)
T ss_pred ----HHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceee
Confidence 223344566778887766678887888999999999999985 699999999999999999999999999987655
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
++-
T Consensus 244 dSk----------------------------------------------------------------------------- 246 (391)
T KOG0983|consen 244 DSK----------------------------------------------------------------------------- 246 (391)
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 311
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC---CCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---GVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~---~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
.-+...|.+.|||||.+.- ..|+.++|+||||+.|+||.|+ |.+...
T Consensus 247 ---------------------------AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t 299 (391)
T KOG0983|consen 247 ---------------------------AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT 299 (391)
T ss_pred ---------------------------ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc
Confidence 1124568899999999865 4689999999999999999996 555545
Q ss_pred HHHHHHhccccCCCCCCC---CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 535 LAAAMSDLRDRILPPSFL---SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~---~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
.+..+..+.. ..||.++ ..+|.+.+|+..||.+|+.+||.-.++|+|||+...
T Consensus 300 dFe~ltkvln-~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 300 DFEVLTKVLN-EEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY 355 (391)
T ss_pred cHHHHHHHHh-cCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence 5555555544 2333332 368999999999999999999999999999998653
No 442
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.93 E-value=3.2e-26 Score=253.32 Aligned_cols=243 Identities=20% Similarity=0.206 Sum_probs=168.2
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+..|.||+|.....-...+..++.|+............-.++...+...+|||++.++..........
T Consensus 10 G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~------------ 77 (259)
T PF07714_consen 10 GSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLF------------ 77 (259)
T ss_dssp ESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEE------------
T ss_pred CCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccc------------
Confidence 45789999887521112234455555533323333445555667777889999998776655222222
Q ss_pred cCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
+++|||.+|+|.++|... ...++..+...|+.||+.||.|||+++|+|+||+|+||+++.++.+||+|||+++..
T Consensus 78 ----lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 78 ----LVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPI 153 (259)
T ss_dssp ----EEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEET
T ss_pred ----cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 389999999999999876 567888899999999999999999999999999999999999999999999988764
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
......
T Consensus 154 ~~~~~~-------------------------------------------------------------------------- 159 (259)
T PF07714_consen 154 SEKSKY-------------------------------------------------------------------------- 159 (259)
T ss_dssp TTSSSE--------------------------------------------------------------------------
T ss_pred cccccc--------------------------------------------------------------------------
Confidence 210000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~ 535 (1092)
.......+...|+|||.+.+..++.++||||||+++|||++ + |.....
T Consensus 160 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~- 211 (259)
T PF07714_consen 160 ---------------------------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN- 211 (259)
T ss_dssp ---------------------------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH-
T ss_pred ---------------------------cccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 00002234556999999999889999999999999999998 3 333222
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
......+.....++.....+..+..++..||+.+|.+||++.+|++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 212 EEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 2222233332223334445788999999999999999999999986
No 443
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.93 E-value=3.1e-25 Score=245.14 Aligned_cols=235 Identities=15% Similarity=0.092 Sum_probs=166.7
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|.||++...+ +..++.|+... .........++..+++...|+|++.+...... .. +
T Consensus 16 ~g~~~~vy~~~~~~-----~~~~~iK~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~---------~--- 75 (260)
T cd05073 16 AGQFGEVWMATYNK-----HTKVAVKTMKP--GSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EP---------I--- 75 (260)
T ss_pred CccceEEEEEEecC-----CccEEEEecCC--ChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CC---------e---
Confidence 34678999997543 22334443321 11112233445567888899999976544332 11 1
Q ss_pred ccCCCcccccCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
..+|||+.|++|.+++.. .+...+..+++.++.||+.||.|||+.|++||||||+||+++..+.+|++|||+++.
T Consensus 76 ----~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~ 151 (260)
T cd05073 76 ----YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV 151 (260)
T ss_pred ----EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceee
Confidence 137999999999999965 345577778899999999999999999999999999999999999999999998865
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+.....
T Consensus 152 ~~~~~~-------------------------------------------------------------------------- 157 (260)
T cd05073 152 IEDNEY-------------------------------------------------------------------------- 157 (260)
T ss_pred ccCCCc--------------------------------------------------------------------------
Confidence 431000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~ 534 (1092)
.......++..|+|||.+....++.++|||||||++|+|++ + |.....
T Consensus 158 ----------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 209 (260)
T cd05073 158 ----------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 209 (260)
T ss_pred ----------------------------ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH
Confidence 00001224456999999998889999999999999999997 4 433222
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
. .....+......+.....+..+.+++.+||+++|.+||++.+++.
T Consensus 210 ~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 210 P-EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred H-HHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 2 222233333333344556788999999999999999999998875
No 444
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.93 E-value=2.3e-25 Score=245.88 Aligned_cols=235 Identities=14% Similarity=0.087 Sum_probs=166.6
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+|.|+||++...+. ..++.|....... ....-.++...+...+|||++.+......+...+
T Consensus 17 g~~~~v~~~~~~~~-----~~~~vK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~------------ 77 (261)
T cd05034 17 GQFGEVWMGTWNGT-----TKVAVKTLKPGTM--SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIY------------ 77 (261)
T ss_pred CcceEEEEEEEcCC-----ceEEEEEecCCcc--CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceE------------
Confidence 57899999876442 2234444432222 1222344556777888999988665533222222
Q ss_pred cCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+|+|++|++|.+++... +..++..+++.++.||+.||.|||++||+|+||||+||+++.++.+|++|||+++.+
T Consensus 78 ----~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~ 153 (261)
T cd05034 78 ----IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLI 153 (261)
T ss_pred ----EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceec
Confidence 379999999999999664 356788899999999999999999999999999999999999999999999988664
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
......
T Consensus 154 ~~~~~~-------------------------------------------------------------------------- 159 (261)
T cd05034 154 EDDEYT-------------------------------------------------------------------------- 159 (261)
T ss_pred cchhhh--------------------------------------------------------------------------
Confidence 310000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~ 535 (1092)
......++..|+|||.+.+..++.++|||||||++|||++ + |.+....
T Consensus 160 ----------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~ 211 (261)
T cd05034 160 ----------------------------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR 211 (261)
T ss_pred ----------------------------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 0001112456999999998889999999999999999997 4 4333222
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
... ..+.....++.....++.+.+++.+||..+|.+||++.++++
T Consensus 212 ~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 212 EVL-EQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHH-HHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 222 222222222333344678899999999999999999999875
No 445
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.93 E-value=7.2e-26 Score=239.26 Aligned_cols=267 Identities=13% Similarity=0.139 Sum_probs=183.5
Q ss_pred ch-hHHHhhhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCC
Q 001366 211 FS-EFFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 211 f~-~~~~~~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 288 (1092)
|. -|.+...+-|.|.-.+-+---.++ .+.+.++||.--.-+.+. .+-++++..+... -|+||+.+++-.-.+...|
T Consensus 75 F~d~YkLt~e~LGeGAyasVqtcv~i~-t~~EYAVKiidKq~gHsR-~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FY 152 (463)
T KOG0607|consen 75 FEDMYKLTSELLGEGAYASVQTCVSIQ-TGKEYAVKIIDKQPGHSR-SRVFREVETFYQCQGHKNILQLIEFFEDDTRFY 152 (463)
T ss_pred HHHHHHhHHHHhcCccceeeeeeeeec-cchhhhhhhhhcCCchHH-HHHHHHHHHHHHhcCCccHHHHHHHhcccceEE
Confidence 44 345555555665422211100111 245566666533323333 3344554444444 7899998877766555555
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc-
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ- 367 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~- 367 (1092)
++||-+.||.|...|..+.. +++.++..+.+.|+.||+|||.+||+||||||+|||-...+.
T Consensus 153 ----------------LVfEKm~GGplLshI~~~~~-F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~v 215 (463)
T KOG0607|consen 153 ----------------LVFEKMRGGPLLSHIQKRKH-FNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKV 215 (463)
T ss_pred ----------------EEEecccCchHHHHHHHhhh-ccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCc
Confidence 38999999999999977654 677799999999999999999999999999999999987665
Q ss_pred --EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 368 --VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 368 --vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
|||+||-+...+. ++.+.
T Consensus 216 sPvKiCDfDLgSg~k------------------------------------~~~~~------------------------ 235 (463)
T KOG0607|consen 216 SPVKICDFDLGSGIK------------------------------------LNNDC------------------------ 235 (463)
T ss_pred Cceeeeccccccccc------------------------------------cCCCC------------------------
Confidence 7999996653322 01100
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-----CCCCccccchhhhH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----GVCTTSSNIYSLGV 520 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----~~~t~~sDIwSLGv 520 (1092)
+ ....+.+.+.+|+..|||||+..- ..|+.++|.|||||
T Consensus 236 ----------s--------------------------pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGv 279 (463)
T KOG0607|consen 236 ----------S--------------------------PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGV 279 (463)
T ss_pred ----------C--------------------------CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHH
Confidence 0 011334567899999999998643 45899999999999
Q ss_pred HHHHHcCCCCcH--------------------HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHh
Q 001366 521 LFFELFGRFDSE--------------------RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREIL 580 (1092)
Q Consensus 521 ll~ell~~f~~~--------------------~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL 580 (1092)
|||-||+|++++ ..++.-++.-........+...+.+..+++..+|..++.+|.+|.+++
T Consensus 280 IlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vl 359 (463)
T KOG0607|consen 280 ILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVL 359 (463)
T ss_pred HHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhcc
Confidence 999999875443 222332333333333345666778888999999999999999999999
Q ss_pred hhhhhhhhhccc
Q 001366 581 QSEVTNEFQEVC 592 (1092)
Q Consensus 581 ~~~~~~~~~~~~ 592 (1092)
+|||++......
T Consensus 360 nhPw~~~~~~ek 371 (463)
T KOG0607|consen 360 NHPWVQRCAPEK 371 (463)
T ss_pred CCccccccchhc
Confidence 999998765443
No 446
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.93 E-value=1.7e-25 Score=249.98 Aligned_cols=243 Identities=17% Similarity=0.185 Sum_probs=170.6
Q ss_pred ccccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecC--CCCCCCccCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSN--GSLDLGARTGVP 296 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 296 (1092)
-+|.|.||+|...+ .+..++.|+..... .........++...+...+|||++.+.+....+ ...+
T Consensus 9 ~g~~~~vy~~~~~~----~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~-------- 76 (287)
T cd07840 9 EGTYGQVYKARNKK----TGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIY-------- 76 (287)
T ss_pred cCCCeEEEEEEECC----CCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEE--------
Confidence 35789999997643 24455555553322 112222334455667777899998876654433 1111
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
.+|+|+.+ +|.+++......++..+++.++.||+.||+|||++|++|+||||+||+++.++.+|++|||++
T Consensus 77 --------lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~ 147 (287)
T cd07840 77 --------MVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLA 147 (287)
T ss_pred --------EEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccce
Confidence 37888875 999999776567888899999999999999999999999999999999999999999999988
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
........
T Consensus 148 ~~~~~~~~------------------------------------------------------------------------ 155 (287)
T cd07840 148 RPYTKRNS------------------------------------------------------------------------ 155 (287)
T ss_pred eeccCCCc------------------------------------------------------------------------
Confidence 76431000
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
...+...++.+|+|||.+.+ ..++.++|||||||++|||+++ |...
T Consensus 156 ------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~ 205 (287)
T cd07840 156 ------------------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGS 205 (287)
T ss_pred ------------------------------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 00112356788999998776 4579999999999999999986 3322
Q ss_pred HHHHHHHHhcc--ccCC--------------------------CCCCCC-CChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 533 RALAAAMSDLR--DRIL--------------------------PPSFLS-ENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 533 ~~~~~~~~~~~--~~~~--------------------------p~~~~~-~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
........... .... ...+.. .++.+.+++.+||.++|.+||++.++++||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~ 285 (287)
T cd07840 206 TELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHE 285 (287)
T ss_pred ChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCc
Confidence 21111111000 0000 001122 267888999999999999999999999999
Q ss_pred hh
Q 001366 584 VT 585 (1092)
Q Consensus 584 ~~ 585 (1092)
||
T Consensus 286 ~~ 287 (287)
T cd07840 286 YF 287 (287)
T ss_pred CC
Confidence 97
No 447
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.93 E-value=2.5e-25 Score=248.78 Aligned_cols=245 Identities=18% Similarity=0.128 Sum_probs=165.4
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhh-H---hhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDA-A---LKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
++.|.||+|...+ .+..++.|+.......... . ..+...+.+...+|||++.+........... ....
T Consensus 10 g~~~~v~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~----~~~~ 81 (287)
T cd07838 10 GAYGTVYKARDLN----TGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDR----ELKL 81 (287)
T ss_pred cCceEEEEEEECC----CCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCC----Ccee
Confidence 4679999999743 2344555444221111111 1 1122222344557999988766544322100 0111
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
+ .+|+|+.+ +|.+++.... ..++...++.++.||+.||.|||++||+|+||||+||+++.++.+|++|||+
T Consensus 82 ~-------l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 82 T-------LVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred E-------EEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCc
Confidence 1 36888875 8999997643 3578889999999999999999999999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
+..+....
T Consensus 154 ~~~~~~~~------------------------------------------------------------------------ 161 (287)
T cd07838 154 ARIYSFEM------------------------------------------------------------------------ 161 (287)
T ss_pred ceeccCCc------------------------------------------------------------------------
Confidence 76643100
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCC---CcH
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRF---DSE 532 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f---~~~ 532 (1092)
......++..|+|||.+.+..++.++|||||||++|||+++. ...
T Consensus 162 --------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~ 209 (287)
T cd07838 162 --------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGT 209 (287)
T ss_pred --------------------------------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCC
Confidence 001234678899999999988999999999999999999863 322
Q ss_pred HHHHHHHHhcccc-----------------CCCC--------CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 533 RALAAAMSDLRDR-----------------ILPP--------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 533 ~~~~~~~~~~~~~-----------------~~p~--------~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
............. .++. .....++.+.+||.+||.+||.+||++.++++||||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 210 SEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred ChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 2211111111100 0000 011234667899999999999999999999999997
No 448
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.93 E-value=2.2e-25 Score=244.70 Aligned_cols=239 Identities=20% Similarity=0.186 Sum_probs=173.3
Q ss_pred cccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
++.|.||++... ..+..++.|...... ..........+...+...+|||++.+......+...
T Consensus 11 g~~~~v~~~~~~----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~------------ 74 (256)
T cd08530 11 GSYGSVYKVKRL----SDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKL------------ 74 (256)
T ss_pred CCceeEEEEEEC----CCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEE------------
Confidence 467889987642 123344444432222 222223334556677888899999765443322111
Q ss_pred ccCCCcccccCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~---~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
..+++|+.|++|.+++... +..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.+|++|||++
T Consensus 75 ----~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~ 150 (256)
T cd08530 75 ----CIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGIS 150 (256)
T ss_pred ----EEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccch
Confidence 1379999999999999652 345788789999999999999999999999999999999999999999999988
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.....
T Consensus 151 ~~~~~~-------------------------------------------------------------------------- 156 (256)
T cd08530 151 KVLKKN-------------------------------------------------------------------------- 156 (256)
T ss_pred hhhccC--------------------------------------------------------------------------
Confidence 664310
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
......++..|+|||.+.+..++.++|+||||+++|||+++ |....
T Consensus 157 -------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~ 205 (256)
T cd08530 157 -------------------------------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS 205 (256)
T ss_pred -------------------------------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 00023467789999999998899999999999999999986 33322
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
.. ...........++.....+..+.+++.+||+++|.+||++.++++||++
T Consensus 206 ~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 206 MQ-DLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HH-HHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 22 1222223334444444567889999999999999999999999999974
No 449
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.92 E-value=1.9e-25 Score=248.61 Aligned_cols=260 Identities=14% Similarity=0.118 Sum_probs=176.4
Q ss_pred hccccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCC-CCCCCccccceecCCCCCCCccCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNA-SPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
..+|.|.||++.... .+..++.|++..... .........+..++.... |||++.++.....+...+
T Consensus 10 g~g~~~~vy~~~~~~----~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~------- 78 (280)
T cd05581 10 GEGSFSTVVLAKEKE----TNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLY------- 78 (280)
T ss_pred cCCCceEEEEEEEcC----CCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEE-------
Confidence 345789999998632 244555555432211 112233344445566666 999987655433222222
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
++|++++|++|.+++...+ .++...++.++.||+.||.|||++|++|+||||+||+++.++.++++|||+
T Consensus 79 ---------lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~ 148 (280)
T cd05581 79 ---------FVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGT 148 (280)
T ss_pred ---------EEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCcc
Confidence 3899999999999998765 578889999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
+............. .+. ..++.
T Consensus 149 ~~~~~~~~~~~~~~-~~~----------------------------------------------------~~~~~----- 170 (280)
T cd05581 149 AKVLDPNSSPESNK-GDA----------------------------------------------------TNIDS----- 170 (280)
T ss_pred ccccCCccccccCC-CCC----------------------------------------------------ccccc-----
Confidence 87655321110000 000 00000
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCC---cH
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFD---SE 532 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~---~~ 532 (1092)
.............|+..|+|||.+.+..++.++|||||||++|+|+++.. ..
T Consensus 171 -------------------------~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 225 (280)
T cd05581 171 -------------------------QIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGS 225 (280)
T ss_pred -------------------------cccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCc
Confidence 00000011124568889999999988889999999999999999998633 22
Q ss_pred HHHHHHHHhcc-ccCCCCCCCCCChhHHHHHHhccccCCCCCCCH----HHHhhhhhh
Q 001366 533 RALAAAMSDLR-DRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT----REILQSEVT 585 (1092)
Q Consensus 533 ~~~~~~~~~~~-~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa----~eiL~~~~~ 585 (1092)
........... ...+| ...++.+.+|+.+||+.+|.+||++ .++|+||||
T Consensus 226 ~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 226 NEYLTFQKILKLEYSFP---PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred cHHHHHHHHHhcCCCCC---CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 22221111111 11222 2337889999999999999999999 999999997
No 450
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=1.6e-23 Score=220.16 Aligned_cols=297 Identities=15% Similarity=0.223 Sum_probs=217.0
Q ss_pred eeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCC
Q 001366 772 TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG 851 (1092)
Q Consensus 772 ~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dg 851 (1092)
...|.+|...|++++|+.||++|||++.|++|+||++..-.+............+ --+.|.|.||....++++-...
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~d---hpT~V~FapDc~s~vv~~~~g~ 155 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYD---HPTRVVFAPDCKSVVVSVKRGN 155 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCC---CceEEEECCCcceEEEEEccCC
Confidence 3467899999999999999999999999999999998753222211111122223 3478899999888888888888
Q ss_pred cEEEEECCCC---ceEEE--------e-eccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEec-CCceEE
Q 001366 852 VVKLWDACTG---QTVSH--------Y-IEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKN-IANVCC 918 (1092)
Q Consensus 852 tV~IWD~~tg---~~i~~--------l-~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~-~~~V~s 918 (1092)
++++|..... ..... | +.|.-.+-++-... ++.+|+|++.|.+|.+||++ |+.+.++.. ...-..
T Consensus 156 ~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~-~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~ 233 (420)
T KOG2096|consen 156 KLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAG-NAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYD 233 (420)
T ss_pred EEEEEEeeecccCCCCcccccccccccchhcccceEEEeecC-CceEEEEecCCCcEEEEecC-Cceeeeeccccccccc
Confidence 9999986532 21111 1 12445555655554 67889999999999999999 899988874 556777
Q ss_pred EEEccCCCeEEEEEECCCeEEEEEcCCCC-------cceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCC
Q 001366 919 VQFSAHSSHLLAFGSADYRTYCYDLRNAR-------APWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSH 990 (1092)
Q Consensus 919 l~fsp~~~~~latgs~Dg~I~vwDlr~~~-------~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~ 990 (1092)
.+.+|+|. ++|+++..-.|++|.+--++ ..+..+.||+..|..++|+ +...++|.|.||+++|||+.-.=.
T Consensus 234 aavSP~GR-Fia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~ 312 (420)
T KOG2096|consen 234 AAVSPDGR-FIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYE 312 (420)
T ss_pred eeeCCCCc-EEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEe
Confidence 89999995 89999999999999874221 1356789999999999999 667899999999999999872100
Q ss_pred CCCCCCceeEEE----cCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEE
Q 001366 991 TGPSTNACSLTF----SGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVS 1066 (1092)
Q Consensus 991 ~~~~~~~~~~~l----~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~ 1066 (1092)
.. .....+++. ..-...--.++++|.|+.||... ...+++|....++....+ ...|...|.
T Consensus 313 ~~-qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~-------------e~~h~~~Is 377 (420)
T KOG2096|consen 313 AG-QDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYPEL-------------EDIHSTTIS 377 (420)
T ss_pred cC-CCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEcccCccchhH-------------HHhhcCcee
Confidence 00 011112211 11222233789999999887655 457999988776654333 256888999
Q ss_pred EEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1067 SVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1067 sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
+|+|+++|+++||+| |..++|+.
T Consensus 378 ~is~~~~g~~~atcG-dr~vrv~~ 400 (420)
T KOG2096|consen 378 SISYSSDGKYIATCG-DRYVRVIR 400 (420)
T ss_pred eEEecCCCcEEeeec-ceeeeeec
Confidence 999999999999987 67787764
No 451
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.92 E-value=1e-25 Score=264.67 Aligned_cols=237 Identities=17% Similarity=0.207 Sum_probs=170.8
Q ss_pred ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhcc-CCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVAS-NASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+.++||+|... ++.+|+|.+..+ -..++.+++.++.. ++|||++..+-.-..+..+++
T Consensus 522 ~Gt~Vf~G~ye------~R~VAVKrll~e----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YI----------- 580 (903)
T KOG1027|consen 522 NGTVVFRGVYE------GREVAVKRLLEE----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYI----------- 580 (903)
T ss_pred CCcEEEEEeeC------CceehHHHHhhH----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEE-----------
Confidence 45799999983 567777666432 34566777777665 599999986554444444442
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC-----CcEEEec
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKG---KRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-----NQVKYIG 372 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~---~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~-----~~vkl~D 372 (1092)
..|.|. .+|.|+++..+... .....+.++.|+++||++||+.+||||||||.||||+.. ..++|+|
T Consensus 581 -----alELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSD 654 (903)
T KOG1027|consen 581 -----ALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISD 654 (903)
T ss_pred -----EehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecc
Confidence 466665 69999997742221 213568899999999999999999999999999999862 4589999
Q ss_pred ccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCC
Q 001366 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1092)
Q Consensus 373 fg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 452 (1092)
||+++.+...
T Consensus 655 fglsKkl~~~---------------------------------------------------------------------- 664 (903)
T KOG1027|consen 655 FGLSKKLAGG---------------------------------------------------------------------- 664 (903)
T ss_pred cccccccCCC----------------------------------------------------------------------
Confidence 9999986610
Q ss_pred CCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC----
Q 001366 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---- 528 (1092)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---- 528 (1092)
.+ .....+...||..|+|||++....-+.++|||||||++|+.+++
T Consensus 665 -------------------~s-----------S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~Hp 714 (903)
T KOG1027|consen 665 -------------------KS-----------SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHP 714 (903)
T ss_pred -------------------cc-----------hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccC
Confidence 00 01113367799999999999998888999999999999999984
Q ss_pred CCcHHHHHHHHHhccccCCCCCCCCCCh--hHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 529 FDSERALAAAMSDLRDRILPPSFLSENP--KEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 529 f~~~~~~~~~~~~~~~~~~p~~~~~~~~--~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|.....+..- +++. ..--..+...+ +..+||.+||+++|..||+|.++|.||+|-..
T Consensus 715 FGd~~~R~~N--Il~~-~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 715 FGDSLERQAN--ILTG-NYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred CCchHHhhhh--hhcC-ccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 5444333222 2221 11111111122 67799999999999999999999999999874
No 452
>PTZ00420 coronin; Provisional
Probab=99.92 E-value=6.1e-23 Score=245.31 Aligned_cols=223 Identities=16% Similarity=0.246 Sum_probs=177.8
Q ss_pred EECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCc--------eeeeEe-cCCceE
Q 001366 847 ADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN--------SLATIK-NIANVC 917 (1092)
Q Consensus 847 gs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~--------~l~~l~-~~~~V~ 917 (1092)
|+.++.|++|+..+...+..+.+|...|++++|+|.++.+||||+.|++|+|||+.++. ++..+. |...|.
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~ 129 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS 129 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence 66789999999888888889999999999999999658899999999999999998642 233444 667899
Q ss_pred EEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCC
Q 001366 918 CVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTN 996 (1092)
Q Consensus 918 sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~ 996 (1092)
+++|+|++..+|++|+.|++|++||++++.. ...+. |...|.+++|+ ++..|++++.|++|+|||++ .+
T Consensus 130 sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~-~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~R--------sg 199 (568)
T PTZ00420 130 IIDWNPMNYYIMCSSGFDSFVNIWDIENEKR-AFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPR--------KQ 199 (568)
T ss_pred EEEECCCCCeEEEEEeCCCeEEEEECCCCcE-EEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECC--------CC
Confidence 9999999877788999999999999998764 33443 56789999998 77788889999999999999 45
Q ss_pred ceeEEEcCCCCCeEE-----EEEecCCCEEEEEecCC----cEEEEeCCC-CCceeeeeccccCCCCCccccCCCCCCEE
Q 001366 997 ACSLTFSGHTNEKNF-----VGLSTADGYIACGSESN----EVYAYHRSL-PMPITSYKFGSIDPISGKETDDDNGLFVS 1066 (1092)
Q Consensus 997 ~~~~~l~~h~~~V~~-----v~~spdg~~lasgs~Dg----~I~Iwd~~~-~~~i~~~~~~~~~~i~~~~~~~~h~~~V~ 1066 (1092)
..+.++.+|.+.+.. ..|++++.+|++++.|+ .|+|||+.. ..++..... +.+...+.
T Consensus 200 ~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~l------------d~~~~~L~ 267 (568)
T PTZ00420 200 EIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSI------------DNASAPLI 267 (568)
T ss_pred cEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEe------------cCCccceE
Confidence 567788899876543 34568889999988764 799999874 556654431 22233333
Q ss_pred EEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1067 SVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1067 sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.....+++.++++|+.|+.|++|++
T Consensus 268 p~~D~~tg~l~lsGkGD~tIr~~e~ 292 (568)
T PTZ00420 268 PHYDESTGLIYLIGKGDGNCRYYQH 292 (568)
T ss_pred EeeeCCCCCEEEEEECCCeEEEEEc
Confidence 3434556889999999999999996
No 453
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.92 E-value=3.1e-25 Score=250.50 Aligned_cols=258 Identities=18% Similarity=0.170 Sum_probs=172.7
Q ss_pred HHHhhhcc--ccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCC-CCCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNG-SLDL 289 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 289 (1092)
|.+.+.++ +.|.||+|...+ .+..++.|+..... ..........+..++...+|||++.+........ ....
T Consensus 9 ~~~~~~lg~g~~g~v~~~~~~~----~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 9 FDIIGQIGEGTYGQVYKARDKD----TGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hheeeeecccCCEEEEEEEECC----CCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 44444443 679999999743 23445554432211 1222233345566777889999998655433221 0000
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
....+. ...+++|+.| +|.+++......++..+++.++.||+.||.|||++||+||||||+||+++.++.+|
T Consensus 85 ~~~~~~-------~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 85 KKDKGA-------FYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred cccCCc-------EEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEE
Confidence 000001 1247889887 78888876655688889999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
++|||+++.......
T Consensus 157 l~dfg~~~~~~~~~~----------------------------------------------------------------- 171 (302)
T cd07864 157 LADFGLARLYNSEES----------------------------------------------------------------- 171 (302)
T ss_pred eCcccccccccCCcc-----------------------------------------------------------------
Confidence 999998876431000
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~ 528 (1092)
.......++..|+|||.+.+ ..++.++|||||||++|||+++
T Consensus 172 -------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g 214 (302)
T cd07864 172 -------------------------------------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTK 214 (302)
T ss_pred -------------------------------------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhC
Confidence 00012345677999998876 4578999999999999999986
Q ss_pred ---CCcHHHHHHH--HHhccccCCC--------------------------CCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001366 529 ---FDSERALAAA--MSDLRDRILP--------------------------PSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1092)
Q Consensus 529 ---f~~~~~~~~~--~~~~~~~~~p--------------------------~~~~~~~~~~~~li~~lL~~dP~~Rpsa~ 577 (1092)
|......... +........+ ..+...++.+.+|+.+||+.+|.+||++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~ 294 (302)
T cd07864 215 KPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAE 294 (302)
T ss_pred CCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 3322221111 1111111111 01223567889999999999999999999
Q ss_pred HHhhhhhh
Q 001366 578 EILQSEVT 585 (1092)
Q Consensus 578 eiL~~~~~ 585 (1092)
+++.||||
T Consensus 295 ~il~~~~~ 302 (302)
T cd07864 295 EALNSPWL 302 (302)
T ss_pred HHhcCCCC
Confidence 99999997
No 454
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=3e-24 Score=218.85 Aligned_cols=247 Identities=20% Similarity=0.280 Sum_probs=196.6
Q ss_pred cCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCC---ceEEEeeccCccEEEEEEe-cCCCCEEEEEeCCCcEEEEec
Q 001366 826 SNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG---QTVSHYIEHEKRAWSVDFS-QVHPTKLASGSDDCSVKLWNI 901 (1092)
Q Consensus 826 ~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg---~~i~~l~~h~~~V~sv~fs-p~~~~~laSgs~Dg~I~iWDl 901 (1092)
.|...|.++...-+ +.+|||||.|++|+|+.+... +.+.+|.+|.++||.++|. |.-|++|||||+||.|.||.-
T Consensus 9 ~H~D~IHda~lDyy-gkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke 87 (299)
T KOG1332|consen 9 QHEDMIHDAQLDYY-GKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE 87 (299)
T ss_pred hhhhhhhHhhhhhh-cceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence 46666666665555 889999999999999998764 4688999999999999995 545789999999999999998
Q ss_pred CCCceeeeEe---cCCceEEEEEccCC-CeEEEEEECCCeEEEEEcCCCC--cceEEecCCCCCeEEEEEcCC-------
Q 001366 902 NEKNSLATIK---NIANVCCVQFSAHS-SHLLAFGSADYRTYCYDLRNAR--APWCVLAGHEKAVSYVKFLDS------- 968 (1092)
Q Consensus 902 ~~~~~l~~l~---~~~~V~sl~fsp~~-~~~latgs~Dg~I~vwDlr~~~--~~~~~l~~H~~~V~~v~fs~~------- 968 (1092)
..++-..... |.+.|++|+|.|.+ ..+|++++.||.|.|.+.++.. ..-.....|.-.|++++|.|.
T Consensus 88 ~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~ 167 (299)
T KOG1332|consen 88 ENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLV 167 (299)
T ss_pred CCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCcccc
Confidence 8874333222 67899999999975 2478999999999999988651 122445789999999999733
Q ss_pred --------CEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCC----CEEEEEecCCcEEEEeCC
Q 001366 969 --------GTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTAD----GYIACGSESNEVYAYHRS 1036 (1092)
Q Consensus 969 --------~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg----~~lasgs~Dg~I~Iwd~~ 1036 (1092)
..|+||+.|+.|+||+..... ...-.++.+|...|+.++|.|.- .+||++|.||+|.||-..
T Consensus 168 ~~~~~~~~krlvSgGcDn~VkiW~~~~~~------w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~ 241 (299)
T KOG1332|consen 168 DQGPAAKVKRLVSGGCDNLVKIWKFDSDS------WKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKD 241 (299)
T ss_pred ccCcccccceeeccCCccceeeeecCCcc------hhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEec
Confidence 469999999999999998532 23345689999999999999973 489999999999999755
Q ss_pred CCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1037 LPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1037 ~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
....-.. ...+......++.+.|++.|++|+.++.|..|.+|.
T Consensus 242 ~e~e~wk-----------~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwk 284 (299)
T KOG1332|consen 242 EEYEPWK-----------KTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWK 284 (299)
T ss_pred CccCccc-----------ccccccCCcceEEEEEeccccEEEEecCCcEEEEEE
Confidence 2111111 012233456899999999999999999999999996
No 455
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.92 E-value=3.9e-25 Score=248.42 Aligned_cols=250 Identities=18% Similarity=0.150 Sum_probs=172.3
Q ss_pred hccccceeeeCCCCCccccccccccccccccccC---chhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM---PSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTG 294 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1092)
..+|.|.||++....+.. .+..++.|++..... .........+.+++... .|++++.+......+...+
T Consensus 9 g~G~~g~v~~~~~~~~~~-~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~------ 81 (290)
T cd05613 9 GTGAYGKVFLVRKVSGHD-SGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH------ 81 (290)
T ss_pred ccCCcceEEEEEeccCCC-CCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE------
Confidence 345789999876532111 245556655432211 11112223344555555 5888887655543332222
Q ss_pred CCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccc
Q 001366 295 VPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1092)
Q Consensus 295 ~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg 374 (1092)
++|||++|++|.++|.... .++...+..++.||+.||.|||++||+||||||+||+++.++.+|++|||
T Consensus 82 ----------lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg 150 (290)
T cd05613 82 ----------LILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFG 150 (290)
T ss_pred ----------EEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCc
Confidence 3799999999999997664 46677889999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++.......
T Consensus 151 ~~~~~~~~~~---------------------------------------------------------------------- 160 (290)
T cd05613 151 LSKEFHEDEV---------------------------------------------------------------------- 160 (290)
T ss_pred cceecccccc----------------------------------------------------------------------
Confidence 8865331000
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC--CCCCccccchhhhHHHHHHcCCCCcH
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLFFELFGRFDSE 532 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~--~~~t~~sDIwSLGvll~ell~~f~~~ 532 (1092)
.......|+..|+|||.+.+ ..++.++|||||||++|+|+++..+.
T Consensus 161 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~ 208 (290)
T cd05613 161 --------------------------------ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPF 208 (290)
T ss_pred --------------------------------cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCC
Confidence 00013467888999999876 34688999999999999999873221
Q ss_pred H------HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhhh
Q 001366 533 R------ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEFQ 589 (1092)
Q Consensus 533 ~------~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~~ 589 (1092)
. ........+.. ..++.....++.+.+|+.+||..+|.+|| ++.+++.||||....
T Consensus 209 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 209 TVDGEKNSQAEISRRILK-SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred CcCCccccHHHHHHHhhc-cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 1 11111122211 11222334578899999999999999997 889999999997753
No 456
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.92 E-value=9.6e-24 Score=217.06 Aligned_cols=239 Identities=16% Similarity=0.234 Sum_probs=202.5
Q ss_pred eeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEE--eeccCccEEEEEEecCCCCEEEEEeCCCcEEEEe
Q 001366 823 VEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSH--YIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900 (1092)
Q Consensus 823 ~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~--l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWD 900 (1092)
...+|..+|.+|+|+-+ +..|++|+.|+++++|++...+.... +.+|++.|-.++|.|.++.+|++++.|.+|++||
T Consensus 15 ~~~~~~~~v~Sv~wn~~-g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd 93 (313)
T KOG1407|consen 15 ELQGHVQKVHSVAWNCD-GTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD 93 (313)
T ss_pred HhhhhhhcceEEEEccc-CceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence 34568899999999998 99999999999999999988755443 5689999999999999999999999999999999
Q ss_pred cCCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCe
Q 001366 901 INEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNK 979 (1092)
Q Consensus 901 l~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~ 979 (1092)
++++++...+.....-.-+.|+|+|. ++++|+.|..|...|.|+.+.. .. ..-...+.-+.|+ ++..++....-|+
T Consensus 94 ~r~~k~~~~i~~~~eni~i~wsp~g~-~~~~~~kdD~it~id~r~~~~~-~~-~~~~~e~ne~~w~~~nd~Fflt~GlG~ 170 (313)
T KOG1407|consen 94 IRSGKCTARIETKGENINITWSPDGE-YIAVGNKDDRITFIDARTYKIV-NE-EQFKFEVNEISWNNSNDLFFLTNGLGC 170 (313)
T ss_pred eccCcEEEEeeccCcceEEEEcCCCC-EEEEecCcccEEEEEeccccee-eh-hcccceeeeeeecCCCCEEEEecCCce
Confidence 99999999998776666789999996 8999999999999999987532 22 2234567778887 6667766677799
Q ss_pred EEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccC
Q 001366 980 LKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDD 1059 (1092)
Q Consensus 980 I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~ 1059 (1092)
|.|-... .-+++.+++.|.....||.|+|+|+|+|+||.|..+-+||+..--++..+ .
T Consensus 171 v~ILsyp--------sLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~i--------------s 228 (313)
T KOG1407|consen 171 VEILSYP--------SLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCI--------------S 228 (313)
T ss_pred EEEEecc--------ccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheee--------------c
Confidence 9998877 34678899999999999999999999999999999999998754444333 3
Q ss_pred CCCCCEEEEEEeCCCCEEEEEecCCeEE
Q 001366 1060 DNGLFVSSVCWRRRSDMVVAANSSGCIK 1087 (1092)
Q Consensus 1060 ~h~~~V~sva~spd~~~Lasgs~DG~V~ 1087 (1092)
.+.-+|..|.|+.||++||+|+.|..|-
T Consensus 229 RldwpVRTlSFS~dg~~lASaSEDh~ID 256 (313)
T KOG1407|consen 229 RLDWPVRTLSFSHDGRMLASASEDHFID 256 (313)
T ss_pred cccCceEEEEeccCcceeeccCccceEE
Confidence 4567899999999999999999999883
No 457
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.92 E-value=9.9e-25 Score=242.45 Aligned_cols=251 Identities=13% Similarity=0.060 Sum_probs=169.9
Q ss_pred hccccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..+|.|.||+|..... ...+..++.|++...- .........++...++...|||++.+++......... ...++.
T Consensus 8 g~g~~g~v~~~~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~---~~~~~~ 83 (273)
T cd05074 8 GKGEFGSVREAQLKSE-DGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKG---RLPIPM 83 (273)
T ss_pred cCCCCCCEEeeEeecc-CCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCC---cccceE
Confidence 3457899999975211 1113455555553321 2223334455667888899999998776544322111 011122
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEec
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARG-----HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIG 372 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~-----~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~D 372 (1092)
.+++|+.+++|.+++.... ..++...++.++.||+.||+|||++||+||||||+||+++.++.+|++|
T Consensus 84 -------~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~d 156 (273)
T cd05074 84 -------VILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVAD 156 (273)
T ss_pred -------EEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECc
Confidence 2578999999999874321 2356778999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCC
Q 001366 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1092)
Q Consensus 373 fg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 452 (1092)
||+++........
T Consensus 157 fg~~~~~~~~~~~------------------------------------------------------------------- 169 (273)
T cd05074 157 FGLSKKIYSGDYY------------------------------------------------------------------- 169 (273)
T ss_pred ccccccccCCcce-------------------------------------------------------------------
Confidence 9988764310000
Q ss_pred CCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---
Q 001366 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R--- 528 (1092)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~--- 528 (1092)
.......++..|++||.+.+..++.++|||||||++|||++ +
T Consensus 170 ----------------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p 215 (273)
T cd05074 170 ----------------------------------RQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTP 215 (273)
T ss_pred ----------------------------------ecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCC
Confidence 00001123456999999998889999999999999999997 4
Q ss_pred CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|...... .....+.....++.....++.+.+++.+||.++|++||++.++++.
T Consensus 216 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 216 YAGVENS-EIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred CCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 3222221 2222222211122223456889999999999999999999999875
No 458
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.92 E-value=2.5e-25 Score=258.22 Aligned_cols=192 Identities=19% Similarity=0.171 Sum_probs=158.1
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
+.||.|-||+|+. ++.|+.+|+|.+-.+...-...+--++...++..+|||||..++..-...+ + +.++.|-.
T Consensus 22 G~Ga~g~V~rgrn----ketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~-~--~~~~~~vl 94 (732)
T KOG4250|consen 22 GKGAFGNVYRGRN----KETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFL-G--LVTRLPVL 94 (732)
T ss_pred cCCccceeeeecc----cccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCcccc-C--cccccceE
Confidence 4568999999996 667899999998777767777777788888999999999987665443333 2 24455444
Q ss_pred cccCCCcccccCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC--Cc--EEEec
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNAR--GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS--NQ--VKYIG 372 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~--~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~--~~--vkl~D 372 (1092)
+||||.||||+..|++. ..-+++.+.+.++..++.|+.|||.+||+||||||.||++-.. |+ .||+|
T Consensus 95 -------vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtD 167 (732)
T KOG4250|consen 95 -------VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTD 167 (732)
T ss_pred -------EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeec
Confidence 79999999999999653 2357777999999999999999999999999999999999643 33 69999
Q ss_pred ccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCC
Q 001366 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1092)
Q Consensus 373 fg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 452 (1092)
||.||.+.+.
T Consensus 168 fG~Arel~d~---------------------------------------------------------------------- 177 (732)
T KOG4250|consen 168 FGAARELDDN---------------------------------------------------------------------- 177 (732)
T ss_pred ccccccCCCC----------------------------------------------------------------------
Confidence 9999986620
Q ss_pred CCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC
Q 001366 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~ 528 (1092)
..+++.+||+.|.+||++.. +.|+..+|.||+||++||..||
T Consensus 178 ----------------------------------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG 220 (732)
T KOG4250|consen 178 ----------------------------------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATG 220 (732)
T ss_pred ----------------------------------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhcc
Confidence 12448899999999999984 8899999999999999999996
No 459
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.92 E-value=6.6e-25 Score=240.26 Aligned_cols=240 Identities=18% Similarity=0.171 Sum_probs=173.8
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++...+ .++.++.|++...... ........+..+++...||+++.+......+...+
T Consensus 3 ~G~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~--------- 69 (250)
T cd05123 3 KGSFGKVLLVRKKD----TGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLY--------- 69 (250)
T ss_pred CCCceEEEEEEECC----CCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeE---------
Confidence 46788999987632 2344455444222211 12233444556677888999998765543332222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
.+|+|+.|++|.+++...+ .+++.++..++.||+.||.|+|++|++|+||||+||+++.++.++++|||++.
T Consensus 70 -------~v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~ 141 (250)
T cd05123 70 -------LVLEYAPGGELFSHLSKEG-RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAK 141 (250)
T ss_pred -------EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcce
Confidence 3799999999999997664 46777999999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
......
T Consensus 142 ~~~~~~-------------------------------------------------------------------------- 147 (250)
T cd05123 142 ELSSEG-------------------------------------------------------------------------- 147 (250)
T ss_pred ecccCC--------------------------------------------------------------------------
Confidence 643100
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
.......++..|+|||.+.+..++.++|+|||||++|||+++ |.....
T Consensus 148 -----------------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~ 198 (250)
T cd05123 148 -----------------------------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR 198 (250)
T ss_pred -----------------------------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH
Confidence 000134567789999999988889999999999999999986 433332
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH---HHHhhhhhh
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT---REILQSEVT 585 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa---~eiL~~~~~ 585 (1092)
......+.... ++.....+..+.+|+.+||..||.+||++ .+++.||||
T Consensus 199 -~~~~~~~~~~~-~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 199 -KEIYEKILKDP-LRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred -HHHHHHHhcCC-CCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 22222222211 22222336788999999999999999999 999999997
No 460
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=2e-24 Score=244.93 Aligned_cols=249 Identities=20% Similarity=0.297 Sum_probs=208.4
Q ss_pred CCCCEE---EEEEc-CCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 778 SANVIC---SISFD-RDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 778 h~~~V~---sl~fs-pdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
|...|. .+..+ |.++||.|||.||.|++|++........ ..+......|..+|+.+....+ ++.|+|+|.|-+|
T Consensus 20 n~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s-~~~~asme~HsDWVNDiiL~~~-~~tlIS~SsDtTV 97 (735)
T KOG0308|consen 20 NRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPS-TPYIASMEHHSDWVNDIILCGN-GKTLISASSDTTV 97 (735)
T ss_pred ccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcc-cchhhhhhhhHhHHhhHHhhcC-CCceEEecCCceE
Confidence 444444 44444 4677899999999999999875332111 1133444568899999988776 7899999999999
Q ss_pred EEEECCCC--ceEEEeeccCccEEEEEE-ecCCCCEEEEEeCCCcEEEEecCCC--ceeeeEe----------cCCceEE
Q 001366 854 KLWDACTG--QTVSHYIEHEKRAWSVDF-SQVHPTKLASGSDDCSVKLWNINEK--NSLATIK----------NIANVCC 918 (1092)
Q Consensus 854 ~IWD~~tg--~~i~~l~~h~~~V~sv~f-sp~~~~~laSgs~Dg~I~iWDl~~~--~~l~~l~----------~~~~V~s 918 (1092)
++|+...+ -|+.++..|.+-|.|++. .+ +..++||||.|+.|.+||++++ ..+.++. +...|.+
T Consensus 98 K~W~~~~~~~~c~stir~H~DYVkcla~~ak-~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYS 176 (735)
T KOG0308|consen 98 KVWNAHKDNTFCMSTIRTHKDYVKCLAYIAK-NNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYS 176 (735)
T ss_pred EEeecccCcchhHhhhhcccchheeeeeccc-CceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceee
Confidence 99999887 578889999999999999 55 7889999999999999999987 3344332 3457999
Q ss_pred EEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCc
Q 001366 919 VQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNA 997 (1092)
Q Consensus 919 l~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~ 997 (1092)
++.++.| .++++|+..+.+++||.|+.+. +..+.||+..|..+..+ ++..++|+|+||+|++||+. ...
T Consensus 177 LA~N~t~-t~ivsGgtek~lr~wDprt~~k-imkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLg--------qQr 246 (735)
T KOG0308|consen 177 LAMNQTG-TIIVSGGTEKDLRLWDPRTCKK-IMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLG--------QQR 246 (735)
T ss_pred eecCCcc-eEEEecCcccceEEeccccccc-eeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecc--------ccc
Confidence 9999998 5999999999999999999875 56677999999999998 77799999999999999999 578
Q ss_pred eeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCC
Q 001366 998 CSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPM 1039 (1092)
Q Consensus 998 ~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~ 1039 (1092)
|+.++..|...|+++..+|+=..+.+|+.|+.|+.=|+.+..
T Consensus 247 Cl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~ 288 (735)
T KOG0308|consen 247 CLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPA 288 (735)
T ss_pred eeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCch
Confidence 999999999999999999999999999999999999988753
No 461
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=3.1e-25 Score=263.62 Aligned_cols=241 Identities=18% Similarity=0.149 Sum_probs=185.8
Q ss_pred ccceeeeCCCCCccccccccccccccccccCchh--hHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD--AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
-+|.||+|...+-.+. +....+.||.-.+...+ +..--++..|++...|||||+++....-+.++++
T Consensus 498 aFGkVf~a~~~~l~p~-~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M---------- 566 (774)
T KOG1026|consen 498 AFGKVFLAEAYGLLPG-QDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM---------- 566 (774)
T ss_pred hhhhhhhhhccCCCCC-ccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE----------
Confidence 5899999999776655 44444444433333333 2334566778999999999998888777777774
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCC---------C----CCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGH---------K----GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~---------~----~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
+.||+..|||.++|+.+.. . ++..+.++|+.||+.|++||-++.+|||||-..|+||.+.-
T Consensus 567 ------vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 567 ------VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENL 640 (774)
T ss_pred ------EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccce
Confidence 8999999999999976532 2 66779999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.|||+|||++|+.-.++.+. ++++
T Consensus 641 ~VKIsDfGLsRdiYssDYYk------------------------------~~~~-------------------------- 664 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSDYYK------------------------------VRGN-------------------------- 664 (774)
T ss_pred EEEecccccchhhhhhhhhc------------------------------ccCC--------------------------
Confidence 99999999999865322210 0000
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
+.+ -..|||||.|..++||.+|||||+||+|||++
T Consensus 665 --------------------------------------------t~l-PIRWMppEsIly~kFTteSDVWs~GVvLWEIF 699 (774)
T KOG1026|consen 665 --------------------------------------------TLL-PIRWMPPESILYGKFTTESDVWSFGVVLWEIF 699 (774)
T ss_pred --------------------------------------------cee-eeecCCHHHhhcCcccchhhhhhhhhhhhhhh
Confidence 001 12489999999999999999999999999999
Q ss_pred C----CCCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 527 G----RFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 527 ~----~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
+ |+.+. ...+.+..++.+.+-+.....++++..|+..|++.+|++||++.||-.
T Consensus 700 syG~QPy~gl-Sn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~ 757 (774)
T KOG1026|consen 700 SYGKQPYYGL-SNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHS 757 (774)
T ss_pred ccccCccccc-chHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 8 23333 234455556666666666777889999999999999999999999843
No 462
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=4.7e-23 Score=217.04 Aligned_cols=243 Identities=15% Similarity=0.226 Sum_probs=202.5
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCC-CCEEEEEECCCc
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI-KNYLASADYDGV 852 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~-~~~LaSgs~Dgt 852 (1092)
.+..|..+|++++.+ +.++|+||.|.+|+|||+... ........|.+.|+++.|.++. .+.|++|+.||.
T Consensus 38 ~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~-------~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~ 108 (362)
T KOG0294|consen 38 AFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKR-------KQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGH 108 (362)
T ss_pred cccccccceeEEEec--ceeEeccCCCCcEEEEeccch-------hhhcceeccccceEEEEecCCcchhheeeecCCCc
Confidence 366899999999975 889999999999999999762 2233456789999999998862 348999999999
Q ss_pred EEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEE
Q 001366 853 VKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFG 932 (1092)
Q Consensus 853 V~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latg 932 (1092)
|.+|++....++.++++|.+.|+.++.+| .+++.++.+.|+.++.||+-+|+.-..+.....-+.|.|+|.|. .|+.+
T Consensus 109 i~iw~~~~W~~~~slK~H~~~Vt~lsiHP-S~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd-~F~v~ 186 (362)
T KOG0294|consen 109 IIIWRVGSWELLKSLKAHKGQVTDLSIHP-SGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGD-HFVVS 186 (362)
T ss_pred EEEEEcCCeEEeeeecccccccceeEecC-CCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCC-EEEEE
Confidence 99999999999999999999999999999 88999999999999999999998877776655556699999997 45555
Q ss_pred ECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEE
Q 001366 933 SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFV 1012 (1092)
Q Consensus 933 s~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v 1012 (1092)
.. ..|-+|-+.+.+.. .. ......+.++.|.++++|++|..|+.|++||.. ...+...+.+|.+.|-.+
T Consensus 187 ~~-~~i~i~q~d~A~v~-~~-i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~d--------s~~~~~~~~AH~~RVK~i 255 (362)
T KOG0294|consen 187 GR-NKIDIYQLDNASVF-RE-IENPKRILCATFLDGSELLVGGDNEWISLKDTD--------SDTPLTEFLAHENRVKDI 255 (362)
T ss_pred ec-cEEEEEecccHhHh-hh-hhccccceeeeecCCceEEEecCCceEEEeccC--------CCccceeeecchhheeee
Confidence 54 45788888765421 11 122356889999999999999999999999998 356788899999999988
Q ss_pred EE--ecCCCEEEEEecCCcEEEEeCCCC
Q 001366 1013 GL--STADGYIACGSESNEVYAYHRSLP 1038 (1092)
Q Consensus 1013 ~~--spdg~~lasgs~Dg~I~Iwd~~~~ 1038 (1092)
.+ .|++.||+++|.||.|+|||+...
T Consensus 256 ~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 256 ASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred EEEecCCceEEEEeccCceEEEEEcccc
Confidence 74 456889999999999999998765
No 463
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.92 E-value=7.2e-25 Score=247.21 Aligned_cols=176 Identities=14% Similarity=0.134 Sum_probs=127.1
Q ss_pred ccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccccccccC
Q 001366 306 QGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASL 385 (1092)
Q Consensus 306 ~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~ 385 (1092)
.|+++ +.++.+.++... ..++..++.|+.||+.||+|||++||+||||||+|||++..+.++++|||+++.+......
T Consensus 105 ~~~~~-~~~~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~ 182 (294)
T PHA02882 105 LLEKL-VENTKEIFKRIK-CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKH 182 (294)
T ss_pred EEehh-ccCHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcc
Confidence 34443 346777776543 3456688999999999999999999999999999999999999999999999875411000
Q ss_pred CCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccC
Q 001366 386 DIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNA 465 (1092)
Q Consensus 386 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 465 (1092)
T Consensus 183 -------------------------------------------------------------------------------- 182 (294)
T PHA02882 183 -------------------------------------------------------------------------------- 182 (294)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHH------
Q 001366 466 GFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALA------ 536 (1092)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~------ 536 (1092)
............||+.|+|||.+.+..++.++|||||||+||||+++ |.......
T Consensus 183 ----------------~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~ 246 (294)
T PHA02882 183 ----------------IEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAA 246 (294)
T ss_pred ----------------cccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHh
Confidence 00000011134699999999999999999999999999999999986 43221111
Q ss_pred --HHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 537 --AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 537 --~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
.....+..... .....++.+.+|+..|+..+|++||++.+|++
T Consensus 247 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 247 KCDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HHHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 11122222111 12233577889999999999999999999986
No 464
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.2e-25 Score=257.63 Aligned_cols=243 Identities=16% Similarity=0.140 Sum_probs=183.7
Q ss_pred ccccceeeeCCCCCcccccccccccccccc--ccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVT--TTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
-+-+|.||+|.....-......+|.+...+ .....+...-.++.++++..+|||++.++..++.+.++++
T Consensus 167 eGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~i-------- 238 (474)
T KOG0194|consen 167 EGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLML-------- 238 (474)
T ss_pred cccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEE--------
Confidence 345899999998332110011145544433 2234456667888999999999999999998888888884
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
+||+|.||+|.++|+..+..++..+.+.++.+.+.||+|||++++|||||-..|+|++.++.+||+|||+++
T Consensus 239 --------vmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 239 --------VMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred --------EEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCcccccc
Confidence 899999999999998887778888999999999999999999999999999999999999999999999987
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
....-.+..
T Consensus 311 ~~~~~~~~~----------------------------------------------------------------------- 319 (474)
T KOG0194|consen 311 AGSQYVMKK----------------------------------------------------------------------- 319 (474)
T ss_pred CCcceeecc-----------------------------------------------------------------------
Confidence 632000000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC----CCCcHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG----RFDSER 533 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~----~f~~~~ 533 (1092)
.. ..+ -..|+|||.+..+.|++++||||+||++||+++ ||++..
T Consensus 320 ------------------------------~~-~kl-PirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~ 367 (474)
T KOG0194|consen 320 ------------------------------FL-KKL-PIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK 367 (474)
T ss_pred ------------------------------cc-ccC-cceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCC
Confidence 00 000 123899999999999999999999999999997 366655
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
........+......+......+....++..|+..+|++||++.++.+
T Consensus 368 ~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 368 NYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred HHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 554444443433333333344566679999999999999999998876
No 465
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=7.1e-24 Score=248.91 Aligned_cols=245 Identities=16% Similarity=0.229 Sum_probs=197.9
Q ss_pred cCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCC--------------------------------C------------
Q 001366 826 SNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACT--------------------------------G------------ 861 (1092)
Q Consensus 826 ~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~t--------------------------------g------------ 861 (1092)
.|.+.|+++.|++| |.+||+||.||.|+||.+.. .
T Consensus 265 ah~gaIw~mKFS~D-GKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~ 343 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHD-GKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS 343 (712)
T ss_pred ccCCcEEEEEeCCC-CceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence 58999999999999 99999999999999998644 0
Q ss_pred ----------------ceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCC
Q 001366 862 ----------------QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHS 925 (1092)
Q Consensus 862 ----------------~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~ 925 (1092)
++++.|.||...|.++.|+. .++|+|+|.|.|||+|++....|+..|.|..-|+||+|+|.+
T Consensus 344 ~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK--n~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvD 421 (712)
T KOG0283|consen 344 QSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK--NNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVD 421 (712)
T ss_pred CCccccCCCccccccccchhhhhccchhheeccccc--CCeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccC
Confidence 23456778999999999996 578999999999999999999999999999999999999998
Q ss_pred CeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEE---
Q 001366 926 SHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLT--- 1001 (1092)
Q Consensus 926 ~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~--- 1001 (1092)
.++|++|+-||.|+||++...+. .....-...|++++|. +|+..+.|+.+|.+++|++....... ...+..
T Consensus 422 DryFiSGSLD~KvRiWsI~d~~V--v~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~---~~~I~~~~~ 496 (712)
T KOG0283|consen 422 DRYFISGSLDGKVRLWSISDKKV--VDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVS---DFHIRLHNK 496 (712)
T ss_pred CCcEeecccccceEEeecCcCee--EeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEE---eeeEeeccC
Confidence 89999999999999999987542 2333344789999999 77889999999999999998543211 000000
Q ss_pred -EcCCCCCeEEEEEecCC-CEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEE
Q 001366 1002 -FSGHTNEKNFVGLSTAD-GYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVA 1079 (1092)
Q Consensus 1002 -l~~h~~~V~~v~~spdg-~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Las 1079 (1092)
-..|. .|+.+.|.|.. .-|+..+.|..|+|||.....++..++- . .....-..-.|+.||++|++
T Consensus 497 Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG-~-----------~n~~SQ~~Asfs~Dgk~IVs 563 (712)
T KOG0283|consen 497 KKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKG-F-----------RNTSSQISASFSSDGKHIVS 563 (712)
T ss_pred ccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcc-c-----------ccCCcceeeeEccCCCEEEE
Confidence 01123 79999998854 3577888999999999987777776651 0 01122355689999999999
Q ss_pred EecCCeEEEEEc
Q 001366 1080 ANSSGCIKVLQM 1091 (1092)
Q Consensus 1080 gs~DG~V~vW~l 1091 (1092)
|+.|..|+||++
T Consensus 564 ~seDs~VYiW~~ 575 (712)
T KOG0283|consen 564 ASEDSWVYIWKN 575 (712)
T ss_pred eecCceEEEEeC
Confidence 999999999986
No 466
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.92 E-value=2.7e-24 Score=225.38 Aligned_cols=275 Identities=16% Similarity=0.241 Sum_probs=232.2
Q ss_pred cCCCCc--EEeEcCCeEEEEEcccceEEeeEEe---eeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCc
Q 001366 742 QNPTDR--LGAFFDGLCKYARYSKFEVQGMLRT---GEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSV 816 (1092)
Q Consensus 742 ~~~~~~--l~~~~D~~~k~w~~~~~~~~~~l~~---~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~ 816 (1092)
++|++. ++++-||.+.+|+|...+....++. ..|.-+.++|.|+.|+.|.+.||+|+.||+|+||.+.+..
T Consensus 221 FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~---- 296 (508)
T KOG0275|consen 221 FSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQ---- 296 (508)
T ss_pred eCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecch----
Confidence 456654 4778999999999988777666542 2455689999999999999999999999999999987621
Q ss_pred ccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcE
Q 001366 817 DVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSV 896 (1092)
Q Consensus 817 ~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I 896 (1092)
........|...|+|+.|+.| +..++++|.|.+|+|--+.+|++++.|++|+.-|+.+.|.+ +|..++++|.||+|
T Consensus 297 --ClRrFdrAHtkGvt~l~FSrD-~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~-dG~~iisaSsDgtv 372 (508)
T KOG0275|consen 297 --CLRRFDRAHTKGVTCLSFSRD-NSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTD-DGHHIISASSDGTV 372 (508)
T ss_pred --HHHHhhhhhccCeeEEEEccC-cchhhcccccceEEEeccccchhHHHhcCccccccceEEcC-CCCeEEEecCCccE
Confidence 122233468999999999998 88899999999999999999999999999999999999999 99999999999999
Q ss_pred EEEecCCCceeeeEec---CCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEec-C--C-CCCeEEEEEcCCC
Q 001366 897 KLWNINEKNSLATIKN---IANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLA-G--H-EKAVSYVKFLDSG 969 (1092)
Q Consensus 897 ~iWDl~~~~~l~~l~~---~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~-~--H-~~~V~~v~fs~~~ 969 (1092)
++|+..+..|+.+++. ..+|+++-.-|.++..++++...++|++.++... .+..+. | . ...|.++--..+.
T Consensus 373 kvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQ--vVrsfsSGkREgGdFi~~~lSpkGe 450 (508)
T KOG0275|consen 373 KVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQ--VVRSFSSGKREGGDFINAILSPKGE 450 (508)
T ss_pred EEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccce--EEeeeccCCccCCceEEEEecCCCc
Confidence 9999999999999984 4579999999988888999999999999998743 344442 2 1 2234444333788
Q ss_pred EEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEe
Q 001366 970 TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYH 1034 (1092)
Q Consensus 970 ~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd 1034 (1092)
++++.+.|+.+..|.+. ++..-.++.-|...+..++-+|..+.||+-++||.+++|.
T Consensus 451 wiYcigED~vlYCF~~~--------sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 451 WIYCIGEDGVLYCFSVL--------SGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred EEEEEccCcEEEEEEee--------cCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence 99999999999999998 4667788889999999999999999999999999999993
No 467
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=6e-22 Score=199.07 Aligned_cols=291 Identities=15% Similarity=0.242 Sum_probs=226.1
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCC----CCccccccee----eecCCCCeEEEEEecCCCCEEEEEE
Q 001366 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFN----DSVDVYYPAV----EMSNRSKLSCVCWNNYIKNYLASAD 848 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~----~~~~~~~~~~----~~~h~~~V~~v~~sp~~~~~LaSgs 848 (1092)
..+..|.+++|+|.|.+.|+|+..++++|..+..... .......|.+ ...|++.|.|++|+|+ +.+|++||
T Consensus 30 ~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~-geliatgs 108 (350)
T KOG0641|consen 30 EDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPC-GELIATGS 108 (350)
T ss_pred cchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCc-cCeEEecC
Confidence 3467899999999999999999999999987654211 1111222232 3458899999999998 99999999
Q ss_pred CCCcEEEEECCCCce-----EEEeeccCccEEEEEEecC---CCCEEEEEe-CCCcEEEEecCCCceeeeEe-cCCceEE
Q 001366 849 YDGVVKLWDACTGQT-----VSHYIEHEKRAWSVDFSQV---HPTKLASGS-DDCSVKLWNINEKNSLATIK-NIANVCC 918 (1092)
Q Consensus 849 ~DgtV~IWD~~tg~~-----i~~l~~h~~~V~sv~fsp~---~~~~laSgs-~Dg~I~iWDl~~~~~l~~l~-~~~~V~s 918 (1092)
.|++|++.-.+...+ -..|.-|.+.|..++|... .+.+|++++ .|..|.+-|..+|...+.+. |.+.|.+
T Consensus 109 ndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghila 188 (350)
T KOG0641|consen 109 NDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILA 188 (350)
T ss_pred CCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEE
Confidence 999999976654322 2356779999999999752 245677766 57888899999999988887 4566765
Q ss_pred EEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecC-------CCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCC
Q 001366 919 VQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAG-------HEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSH 990 (1092)
Q Consensus 919 l~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~-------H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~ 990 (1092)
+- +-++ .++++|+.|.+|++||+|-... +.++.. ..++|.+|+.. .+..|++|-.|....+||++
T Consensus 189 ly-swn~-~m~~sgsqdktirfwdlrv~~~-v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydir---- 261 (350)
T KOG0641|consen 189 LY-SWNG-AMFASGSQDKTIRFWDLRVNSC-VNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIR---- 261 (350)
T ss_pred EE-EecC-cEEEccCCCceEEEEeeeccce-eeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEee----
Confidence 52 2234 5899999999999999996543 333321 23678999988 56678899999999999999
Q ss_pred CCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCC--ceeeeeccccCCCCCccccCCCCCCEEEE
Q 001366 991 TGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPM--PITSYKFGSIDPISGKETDDDNGLFVSSV 1068 (1092)
Q Consensus 991 ~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~--~i~~~~~~~~~~i~~~~~~~~h~~~V~sv 1068 (1092)
.+..++.+..|+..|.+|.|||.--|+++||.|..|++-|+..-- .+.. .+...|...+-.+
T Consensus 262 ----g~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~------------~vv~ehkdk~i~~ 325 (350)
T KOG0641|consen 262 ----GGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPI------------MVVAEHKDKAIQC 325 (350)
T ss_pred ----CCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCce------------EEEEeccCceEEE
Confidence 467889999999999999999999999999999999999875321 1111 1234677888999
Q ss_pred EEeCCCCEEEEEecCCeEEEEEc
Q 001366 1069 CWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1069 a~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.|+|..-.+++.+.|.++.+|-+
T Consensus 326 rwh~~d~sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 326 RWHPQDFSFISSSADKTATLWAL 348 (350)
T ss_pred EecCccceeeeccCcceEEEecc
Confidence 99999999999999999999964
No 468
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.91 E-value=8.4e-25 Score=245.43 Aligned_cols=248 Identities=19% Similarity=0.168 Sum_probs=168.2
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC---chhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM---PSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
.+|.|.||++...... ..+..++.|+...... .........+..++... .||+++.+......+...+
T Consensus 10 ~G~~~~vy~~~~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~------- 81 (288)
T cd05583 10 TGAYGKVFLVRKVGGH-DAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH------- 81 (288)
T ss_pred cCCCceEEEEEEeccc-cCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE-------
Confidence 3467899987642111 1123344443321111 11122233445555566 5899887665543322222
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
.+|+|+.|++|.+++...+ .++..+++.++.|++.+|+|||+.|++||||||+||+++.++.++++|||+
T Consensus 82 ---------lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~ 151 (288)
T cd05583 82 ---------LILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGL 151 (288)
T ss_pred ---------EEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcc
Confidence 3799999999999997653 467778999999999999999999999999999999999999999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++.......
T Consensus 152 ~~~~~~~~~----------------------------------------------------------------------- 160 (288)
T cd05583 152 SKEFLAEEE----------------------------------------------------------------------- 160 (288)
T ss_pred ccccccccc-----------------------------------------------------------------------
Confidence 765431000
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC--CCccccchhhhHHHHHHcCCCCcHH
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV--CTTSSNIYSLGVLFFELFGRFDSER 533 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~--~t~~sDIwSLGvll~ell~~f~~~~ 533 (1092)
.......|+..|+|||.+.+.. .+.++||||||+++|||+++..+..
T Consensus 161 -------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~ 209 (288)
T cd05583 161 -------------------------------ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFT 209 (288)
T ss_pred -------------------------------cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcc
Confidence 0000235778899999987754 7889999999999999999633321
Q ss_pred ------HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC---HHHHhhhhhhhhh
Q 001366 534 ------ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT---TREILQSEVTNEF 588 (1092)
Q Consensus 534 ------~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps---a~eiL~~~~~~~~ 588 (1092)
........... ..++.....++.+.+|+.+||.++|++||| +.++|+||||...
T Consensus 210 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 210 VDGEQNSQSEISRRILK-SKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred cCcccchHHHHHHHHHc-cCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence 11111111111 122333345788999999999999999998 5678999999764
No 469
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.91 E-value=1.9e-23 Score=226.60 Aligned_cols=260 Identities=17% Similarity=0.208 Sum_probs=212.3
Q ss_pred EeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCC
Q 001366 749 GAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR 828 (1092)
Q Consensus 749 ~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~ 828 (1092)
.+.+|..|++|+..-.. .-....|.+..+.|++++|++++.++++++.|+.+++|+++. .......-+|.
T Consensus 192 tgg~Dr~Ik~W~v~~~k---~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~-------~r~~~TLsGHt 261 (459)
T KOG0288|consen 192 TGGSDRIIKLWNVLGEK---SELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDS-------LRLRHTLSGHT 261 (459)
T ss_pred hcchhhhhhhhhcccch---hhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccc-------hhhhhhhcccc
Confidence 66789999999854322 112345778889999999999999999999999999999875 23344556799
Q ss_pred CCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceee
Q 001366 829 SKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLA 908 (1092)
Q Consensus 829 ~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~ 908 (1092)
.+|+++.|... ...+++|+.|.+|++||+....|.+++- ....+..|..++ ..++||-.|++|++||+++..+..
T Consensus 262 dkVt~ak~~~~-~~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~~---~~~~SgH~DkkvRfwD~Rs~~~~~ 336 (459)
T KOG0288|consen 262 DKVTAAKFKLS-HSRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCSI---SDVISGHFDKKVRFWDIRSADKTR 336 (459)
T ss_pred cceeeehhhcc-ccceeeccccchhhhhhhhhhheecccc-ccccccceEecc---eeeeecccccceEEEeccCCceee
Confidence 99999999886 4459999999999999999988888765 344566666653 578999999999999999999999
Q ss_pred eEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecC----CCCCeEEEEEc-CCCEEEEEECCCeEEEE
Q 001366 909 TIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAG----HEKAVSYVKFL-DSGTLVTASTDNKLKLW 983 (1092)
Q Consensus 909 ~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~----H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vW 983 (1092)
+....+.|+++..++++. -+.+.+.|.++.+.|+|+... ..++.+ ..+.++.+.|+ ++.|+++||.||.|+||
T Consensus 337 sv~~gg~vtSl~ls~~g~-~lLsssRDdtl~viDlRt~eI-~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW 414 (459)
T KOG0288|consen 337 SVPLGGRVTSLDLSMDGL-ELLSSSRDDTLKVIDLRTKEI-RQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIW 414 (459)
T ss_pred EeecCcceeeEeeccCCe-EEeeecCCCceeeeecccccE-EEEeeccccccccccceeEECCCCceeeeccCCCcEEEE
Confidence 999999999999999996 566669999999999998653 233322 12348889999 66789999999999999
Q ss_pred EcCCCCCCCCCCCceeEEEcCCCC--CeEEEEEecCCCEEEEEecCCcEEEE
Q 001366 984 DLKRTSHTGPSTNACSLTFSGHTN--EKNFVGLSTADGYIACGSESNEVYAY 1033 (1092)
Q Consensus 984 Dl~~~~~~~~~~~~~~~~l~~h~~--~V~~v~~spdg~~lasgs~Dg~I~Iw 1033 (1092)
++. ++++...+..... .|++++|+|.|.++++++.++.+.+|
T Consensus 415 ~v~--------tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 415 SVF--------TGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred Ecc--------CceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 998 4556666665333 59999999999999999999999999
No 470
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.91 E-value=6.3e-23 Score=213.59 Aligned_cols=298 Identities=17% Similarity=0.227 Sum_probs=227.0
Q ss_pred cCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCCCCCc----ccc----cceeeecCCCCeEEEEEecCCCCEEEE
Q 001366 776 NNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSV----DVY----YPAVEMSNRSKLSCVCWNNYIKNYLAS 846 (1092)
Q Consensus 776 ~~h~~~V~sl~fsp-dg~~latgg~D~~I~Iwd~~~~~~~~~----~~~----~~~~~~~h~~~V~~v~~sp~~~~~LaS 846 (1092)
..|.+.|+++...+ .|+|+++|+.||.|.|||+......+. -.+ ......+|+-.|.++.|.|-+..++.+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 36889999999998 589999999999999999975321110 001 111234578889999999988889999
Q ss_pred EECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCC--CEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEcc
Q 001366 847 ADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHP--TKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSA 923 (1092)
Q Consensus 847 gs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~--~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp 923 (1092)
+|.|.++++||.++-+....|+ ..+.|++-+++|... .++|+|..|-.|++.|+.+|.+-+++. |...|.+|.|+|
T Consensus 120 sSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp 198 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSP 198 (397)
T ss_pred ccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEecc
Confidence 9999999999999999888886 577888888888533 468889999999999999999999998 678999999999
Q ss_pred CCCeEEEEEECCCeEEEEEcCCCCcceE--------------EecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCC
Q 001366 924 HSSHLLAFGSADYRTYCYDLRNARAPWC--------------VLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRT 988 (1092)
Q Consensus 924 ~~~~~latgs~Dg~I~vwDlr~~~~~~~--------------~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~ 988 (1092)
.....|++|+.||.|++||+|...-... +-..|.+.|..++|. ++.++++++.|..+++|+..++
T Consensus 199 ~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G 278 (397)
T KOG4283|consen 199 SSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESG 278 (397)
T ss_pred CceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccC
Confidence 9989999999999999999986422222 234677889999997 8889999999999999999876
Q ss_pred CCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEE
Q 001366 989 SHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSV 1068 (1092)
Q Consensus 989 ~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sv 1068 (1092)
.......+.....-..| ....+. +.+...++---.++.+.++++-.+..|... ..|...|.+.
T Consensus 279 ~ntl~~~g~~~~n~~~~--~~~~~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l--------------~~h~k~i~c~ 341 (397)
T KOG4283|consen 279 RNTLREFGPIIHNQTTS--FAVHIQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRL--------------STHLKRINCA 341 (397)
T ss_pred ccccccccccccccccc--ceEEEe-ecccceEEEEecCCeEEEEEccCceEEEee--------------ecccceeeEE
Confidence 54322222211111111 111122 333334444445577888887777766554 3456779999
Q ss_pred EEeCCCCEEEEEecCCeEEEEEc
Q 001366 1069 CWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1069 a~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
++.|+=+.+.+|..||.|..|-.
T Consensus 342 ~~~~~fq~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 342 AYRPDFEQCFTGDMNGNIYMWSP 364 (397)
T ss_pred eecCchhhhhccccCCccccccc
Confidence 99999999999999999998853
No 471
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.91 E-value=9.9e-25 Score=250.09 Aligned_cols=247 Identities=17% Similarity=0.230 Sum_probs=169.2
Q ss_pred hccccceeeeCCCCCcccccccccccccccc-ccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVT-TTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..+|.|.||++.... .+..++.|...- ............+...+...+|||++.+..........
T Consensus 19 g~g~~g~v~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~---------- 84 (328)
T cd07856 19 GMGAFGLVCSARDQL----TGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED---------- 84 (328)
T ss_pred cccCCeEEEEEEECC----CCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc----------
Confidence 335789999987532 244555543321 11111122233456677788999999765543321111
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
.-++|+|+ |++|.++++.. .++...+..++.||++||.|||++||+||||||+||+++.++.+|++|||+++
T Consensus 85 -----~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 85 -----IYFVTELL-GTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred -----EEEEeehh-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 11367887 67999988754 45666788999999999999999999999999999999999999999999875
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
....
T Consensus 157 ~~~~---------------------------------------------------------------------------- 160 (328)
T cd07856 157 IQDP---------------------------------------------------------------------------- 160 (328)
T ss_pred ccCC----------------------------------------------------------------------------
Confidence 4220
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
......++..|+|||.+.+ ..++.++|||||||++|||+++ |....
T Consensus 161 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~ 210 (328)
T cd07856 161 ------------------------------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKD 210 (328)
T ss_pred ------------------------------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 0012356778999999876 5689999999999999999986 43322
Q ss_pred HHHH--H------------------------HHhcccc-CCC--CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001366 534 ALAA--A------------------------MSDLRDR-ILP--PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1092)
Q Consensus 534 ~~~~--~------------------------~~~~~~~-~~p--~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~ 584 (1092)
.... . +..+... ..| ......++.+.+|+.+||.++|++||++.+++.|||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~ 290 (328)
T cd07856 211 HVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPY 290 (328)
T ss_pred HHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCc
Confidence 1100 0 0001100 111 112345678999999999999999999999999999
Q ss_pred hhhhhccch
Q 001366 585 TNEFQEVCA 593 (1092)
Q Consensus 585 ~~~~~~~~~ 593 (1092)
|...+.+..
T Consensus 291 ~~~~~~~~~ 299 (328)
T cd07856 291 LAPYHDPTD 299 (328)
T ss_pred cccccCCcc
Confidence 976655443
No 472
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.91 E-value=4.7e-24 Score=217.55 Aligned_cols=267 Identities=14% Similarity=0.175 Sum_probs=218.3
Q ss_pred cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeec
Q 001366 747 RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS 826 (1092)
Q Consensus 747 ~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~ 826 (1092)
.++++-|+...+-.-...+.. ++|.+|...|.+..++.+...-|+++.|-+.+|||.-+.. ....+.
T Consensus 32 lisa~kd~~pmlr~g~tgdwi-----gtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgd--------elhsf~ 98 (334)
T KOG0278|consen 32 LISASKDGKPMLRNGDTGDWI-----GTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGD--------ELHSFE 98 (334)
T ss_pred EEEeccCCCchhccCCCCCcE-----EeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhh--------hhhhhh
Confidence 457777776655443333333 3577999999999999999999999999999999965421 123456
Q ss_pred CCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCc-eEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCc
Q 001366 827 NRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ-TVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN 905 (1092)
Q Consensus 827 h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~-~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~ 905 (1092)
|+.-|.+++|+.| .++|++|+.++.+||||++..+ ....+.+|++.|..+-|+. ..+.++|+++|++||+||.++++
T Consensus 99 hkhivk~~af~~d-s~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~-eD~~iLSSadd~tVRLWD~rTgt 176 (334)
T KOG0278|consen 99 HKHIVKAVAFSQD-SNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCH-EDKCILSSADDKTVRLWDHRTGT 176 (334)
T ss_pred hhheeeeEEeccc-chhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEec-cCceEEeeccCCceEEEEeccCc
Confidence 8888999999998 8899999999999999998764 6778899999999999998 66778888999999999999999
Q ss_pred eeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEE
Q 001366 906 SLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWD 984 (1092)
Q Consensus 906 ~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWD 984 (1092)
.++++..+.+|+++..+++|. +++-...+.|.+||..+... ++.+. -...|.+...+ +.+.+++|+.|..++.||
T Consensus 177 ~v~sL~~~s~VtSlEvs~dG~--ilTia~gssV~Fwdaksf~~-lKs~k-~P~nV~SASL~P~k~~fVaGged~~~~kfD 252 (334)
T KOG0278|consen 177 EVQSLEFNSPVTSLEVSQDGR--ILTIAYGSSVKFWDAKSFGL-LKSYK-MPCNVESASLHPKKEFFVAGGEDFKVYKFD 252 (334)
T ss_pred EEEEEecCCCCcceeeccCCC--EEEEecCceeEEeccccccc-eeecc-CccccccccccCCCceEEecCcceEEEEEe
Confidence 999999999999999999995 55666778999999988654 33332 23457777777 446788999999999999
Q ss_pred cCCCCCCCCCCCceeEEE-cCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCc
Q 001366 985 LKRTSHTGPSTNACSLTF-SGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMP 1040 (1092)
Q Consensus 985 l~~~~~~~~~~~~~~~~l-~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~ 1040 (1092)
..++. .+-.+ ++|-++|.||.|+|+|...|+||+||+|++|....++.
T Consensus 253 y~Tge--------Ei~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~ 301 (334)
T KOG0278|consen 253 YNTGE--------EIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKT 301 (334)
T ss_pred ccCCc--------eeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCc
Confidence 99644 33444 79999999999999999999999999999998765543
No 473
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=1.6e-22 Score=222.13 Aligned_cols=292 Identities=14% Similarity=0.176 Sum_probs=230.3
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEE
Q 001366 778 SANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWD 857 (1092)
Q Consensus 778 h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD 857 (1092)
..+.|++|.|+|.-.+|++||.|++++||.++...+..+.. ..-...+|.+.+|.|++...+++++.-...+.||
T Consensus 212 s~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS-----~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyD 286 (514)
T KOG2055|consen 212 SHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQS-----IHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYD 286 (514)
T ss_pred CcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhhee-----eeeccCccceeeecCCCceEEEecccceEEEEee
Confidence 45689999999999999999999999999998744322211 1123688999999998555999999999999999
Q ss_pred CCCCce--EEEeeccC-ccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEEC
Q 001366 858 ACTGQT--VSHYIEHE-KRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSA 934 (1092)
Q Consensus 858 ~~tg~~--i~~l~~h~-~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~ 934 (1092)
+.+.+. +....++. ..+.....++ ++++|+..+..|.|.+....++..+.+++..+.|..+.|+.++. .|++.+.
T Consensus 287 le~ak~~k~~~~~g~e~~~~e~FeVSh-d~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk-~l~~~~~ 364 (514)
T KOG2055|consen 287 LETAKVTKLKPPYGVEEKSMERFEVSH-DSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSK-ELLASGG 364 (514)
T ss_pred ccccccccccCCCCcccchhheeEecC-CCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCc-EEEEEcC
Confidence 998864 33444554 3467788888 88899999999999999999999999999999999999999995 6666777
Q ss_pred CCeEEEEEcCCCCcceEEecCCCCCe--EEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEE
Q 001366 935 DYRTYCYDLRNARAPWCVLAGHEKAV--SYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNF 1011 (1092)
Q Consensus 935 Dg~I~vwDlr~~~~~~~~l~~H~~~V--~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~ 1011 (1092)
+|.|++||++.... +..+.. .+.| ++++.+ ++.+|++||..|.|.|||..+.-. ....+++.++..-+..|++
T Consensus 365 ~GeV~v~nl~~~~~-~~rf~D-~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~--s~~PkPik~~dNLtt~Its 440 (514)
T KOG2055|consen 365 TGEVYVWNLRQNSC-LHRFVD-DGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFA--STNPKPIKTVDNLTTAITS 440 (514)
T ss_pred CceEEEEecCCcce-EEEEee-cCccceeeeeecCCCceEEeccCcceEEEeccchhhc--cCCCCchhhhhhhheeeee
Confidence 89999999998753 344432 2233 445555 788999999999999999764221 2245677788888889999
Q ss_pred EEEecCCCEEEEEe--cCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEE
Q 001366 1012 VGLSTADGYIACGS--ESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVL 1089 (1092)
Q Consensus 1012 v~~spdg~~lasgs--~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW 1089 (1092)
+.|++|..+||.+| .++.+++-++.+.....-++ .....-+.|++|+|+|.+.+||.|+.+|.|.+|
T Consensus 441 l~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP-----------~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~ 509 (514)
T KOG2055|consen 441 LQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFP-----------TSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLF 509 (514)
T ss_pred eeeCcchhhhhhhhhccccceEEEeccceeeeccCC-----------CCCCcccceEEEEecCCCceEEeecCCCceeeE
Confidence 99999999988777 46789998876544332221 112234679999999999999999999999999
Q ss_pred Ec
Q 001366 1090 QM 1091 (1092)
Q Consensus 1090 ~l 1091 (1092)
+|
T Consensus 510 kL 511 (514)
T KOG2055|consen 510 KL 511 (514)
T ss_pred ee
Confidence 87
No 474
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.91 E-value=3.2e-24 Score=237.96 Aligned_cols=241 Identities=15% Similarity=0.175 Sum_probs=165.3
Q ss_pred hccccceeeeCCCCCccccccccccccccccc---------cCchhhHhhhhhhhhhc-cCCCCCCCccccceecCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTT---------TMPSDAALKAAGAMMVA-SNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
..++.|.||+|..... .+..++.|...-. .........+.+..++. ...|||++........+...+
T Consensus 9 g~G~~~~v~~~~~~~~---~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 85 (269)
T cd08528 9 GSGAFGCVYKVRKKNN---GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLY 85 (269)
T ss_pred cCCCCceEEEEEEcCC---CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEE
Confidence 3457899999987430 1233333322110 01111122333444444 368999987655543333222
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhh-cCccccCCCCCCeEEcc
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lHs-~gIvHrDLKP~Nill~~ 364 (1092)
++|||++|++|.+++.. .+..++...++.++.|++.+|.|||+ .||+|+||||+||+++.
T Consensus 86 ----------------lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~ 149 (269)
T cd08528 86 ----------------IVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGE 149 (269)
T ss_pred ----------------EEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECC
Confidence 38999999999999843 44567888899999999999999996 78999999999999999
Q ss_pred CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 365 ~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
++.+|++|||++.......
T Consensus 150 ~~~~~l~dfg~~~~~~~~~------------------------------------------------------------- 168 (269)
T cd08528 150 DDKVTITDFGLAKQKQPES------------------------------------------------------------- 168 (269)
T ss_pred CCcEEEecccceeeccccc-------------------------------------------------------------
Confidence 9999999999886533100
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~e 524 (1092)
......|+..|+|||.+.+..++.++|+|||||++||
T Consensus 169 -------------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~ 205 (269)
T cd08528 169 -------------------------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQ 205 (269)
T ss_pred -------------------------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHH
Confidence 0113456778999999999889999999999999999
Q ss_pred HcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 525 LFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 525 ll~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|+++ |..................|......++.+.+|+.+||..||++||++.|+..+
T Consensus 206 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 206 MCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred HHhCCCcccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 9986 322222222222222222222222457889999999999999999999998764
No 475
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.91 E-value=2.7e-24 Score=232.64 Aligned_cols=239 Identities=20% Similarity=0.234 Sum_probs=174.9
Q ss_pred ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcccc
Q 001366 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (1092)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (1092)
|.|.||+|...+ .+..++.|++.............++...+...+|++++.+......+...
T Consensus 1 ~~g~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~-------------- 62 (244)
T smart00220 1 SFGKVYLARDKK----TGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKL-------------- 62 (244)
T ss_pred CceEEEEEEECC----CCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEE--------------
Confidence 578899998742 24555666654332222123344455566677999988765554332211
Q ss_pred CCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccccc
Q 001366 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLE 381 (1092)
Q Consensus 302 ~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~ 381 (1092)
..+++|+.+++|.+++..... ++...+..++.|++.++.|||+.||+|+||+|+||+++.++.++++|||.+.....
T Consensus 63 --~l~~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~ 139 (244)
T smart00220 63 --YLVMEYCDGGDLFDLLKKRGR-LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDP 139 (244)
T ss_pred --EEEEeCCCCCCHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecc
Confidence 237999999999999976544 77779999999999999999999999999999999999999999999998876441
Q ss_pred cccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccc
Q 001366 382 SASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEH 461 (1092)
Q Consensus 382 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 461 (1092)
..
T Consensus 140 ~~------------------------------------------------------------------------------ 141 (244)
T smart00220 140 GG------------------------------------------------------------------------------ 141 (244)
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred cccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHHHH
Q 001366 462 HTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAA 538 (1092)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~~~ 538 (1092)
......++..|+|||.+.+..++.++||||||+++|+|+++ |.........
T Consensus 142 --------------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~ 195 (244)
T smart00220 142 --------------------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLEL 195 (244)
T ss_pred --------------------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 01134567789999999888899999999999999999986 3332233333
Q ss_pred HHhccccCCCCCCCC--CChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 539 MSDLRDRILPPSFLS--ENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 539 ~~~~~~~~~p~~~~~--~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
...+.....+..... ...++.+|+.+||..+|.+||++.++++||||
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 196 FKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 333333333222211 56789999999999999999999999999997
No 476
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=1.4e-24 Score=235.38 Aligned_cols=178 Identities=18% Similarity=0.207 Sum_probs=148.9
Q ss_pred cccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccccccc
Q 001366 305 RQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESAS 384 (1092)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~ 384 (1092)
.+|||+.||+|.-.|+.-|. +.+..+..++..|+-||-|||++|||.||||.+||+|+..|+|||+|||++++-.-
T Consensus 427 FVMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~--- 502 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF--- 502 (683)
T ss_pred eEEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccccc---
Confidence 38999999999999988775 44458999999999999999999999999999999999999999999999876220
Q ss_pred CCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccccccc
Q 001366 385 LDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTN 464 (1092)
Q Consensus 385 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 464 (1092)
+
T Consensus 503 -----------------------------------------------------------------~-------------- 503 (683)
T KOG0696|consen 503 -----------------------------------------------------------------D-------------- 503 (683)
T ss_pred -----------------------------------------------------------------C--------------
Confidence 0
Q ss_pred CCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHHHHHHh
Q 001366 465 AGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSD 541 (1092)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~~~~~~ 541 (1092)
.....+.+|||-|+|||++.-.+|+.++|.||+||+|||||.| |+++.+......+
T Consensus 504 ---------------------~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI 562 (683)
T KOG0696|consen 504 ---------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAI 562 (683)
T ss_pred ---------------------CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 0001268999999999999999999999999999999999974 8877665555555
Q ss_pred ccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH-----HHHhhhhhhhhh
Q 001366 542 LRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQSEVTNEF 588 (1092)
Q Consensus 542 ~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa-----~eiL~~~~~~~~ 588 (1092)
..+....|.. .+.+...+|..+|.+.|.+|... ++|-.||||...
T Consensus 563 ~ehnvsyPKs--lSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~i 612 (683)
T KOG0696|consen 563 MEHNVSYPKS--LSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRI 612 (683)
T ss_pred HHccCcCccc--ccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhc
Confidence 5555544443 37888899999999999999765 789999999764
No 477
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=6.9e-25 Score=243.70 Aligned_cols=210 Identities=15% Similarity=0.144 Sum_probs=164.1
Q ss_pred HhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHH
Q 001366 257 ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFR 336 (1092)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~ 336 (1092)
.--+.+...+.....|-|+.++.-.-.+...|+ +||-|.||.|...|+.+|. ++...++.|+.
T Consensus 465 eHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYm----------------LmEaClGGElWTiLrdRg~-Fdd~tarF~~a 527 (732)
T KOG0614|consen 465 EHVFSERNIMMECRSDFIVRLYRTFRDSKYVYM----------------LMEACLGGELWTILRDRGS-FDDYTARFYVA 527 (732)
T ss_pred HHHHhHHHHHHhcCchHHHHHHHHhccchhhhh----------------hHHhhcCchhhhhhhhcCC-cccchhhhhHH
Confidence 334455556667778888876544333333332 8999999999999998886 55559999999
Q ss_pred HHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcc
Q 001366 337 QIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQK 416 (1092)
Q Consensus 337 qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 416 (1092)
-+++|++|||++|||.|||||+|++|+..|-+|+.|||.|+.+....
T Consensus 528 cv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~--------------------------------- 574 (732)
T KOG0614|consen 528 CVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR--------------------------------- 574 (732)
T ss_pred HHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCC---------------------------------
Confidence 99999999999999999999999999999999999999999876100
Q ss_pred cccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccc
Q 001366 417 FNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEK 496 (1092)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 496 (1092)
..-++||||
T Consensus 575 -----------------------------------------------------------------------KTwTFcGTp 583 (732)
T KOG0614|consen 575 -----------------------------------------------------------------------KTWTFCGTP 583 (732)
T ss_pred -----------------------------------------------------------------------ceeeecCCc
Confidence 011789999
Q ss_pred cccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHHHHHHhccccCCCCCCCC-CChhHHHHHHhccccCCCC
Q 001366 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLS-ENPKEAGFCLWQLHPEPLS 572 (1092)
Q Consensus 497 ~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~li~~lL~~dP~~ 572 (1092)
.|.|||++.+...+.++|+||||+++||||+| |.+.+.......+++.-. --.|+. ......+|++++...+|..
T Consensus 584 EYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid-~i~~Pr~I~k~a~~Lik~LCr~~P~E 662 (732)
T KOG0614|consen 584 EYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGID-KIEFPRRITKTATDLIKKLCRDNPTE 662 (732)
T ss_pred ccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhh-hhhcccccchhHHHHHHHHHhcCcHh
Confidence 99999999999999999999999999999985 665555544444444321 112222 2445669999999999999
Q ss_pred CCC-----HHHHhhhhhhhhh
Q 001366 573 RPT-----TREILQSEVTNEF 588 (1092)
Q Consensus 573 Rps-----a~eiL~~~~~~~~ 588 (1092)
|.. ..||-+|-||...
T Consensus 663 RLG~~~~gI~DIkkH~Wf~gf 683 (732)
T KOG0614|consen 663 RLGYQKGGINDIKKHRWFEGF 683 (732)
T ss_pred hhccccCChHHHHhhhhhhcC
Confidence 986 6999999999875
No 478
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=1.6e-21 Score=195.99 Aligned_cols=285 Identities=20% Similarity=0.193 Sum_probs=222.0
Q ss_pred ccCCCCcEEe--EcCCeEEEEEcccceEEe----------eEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 001366 741 IQNPTDRLGA--FFDGLCKYARYSKFEVQG----------MLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEF 808 (1092)
Q Consensus 741 ~~~~~~~l~~--~~D~~~k~w~~~~~~~~~----------~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~ 808 (1092)
.++|.+.|-+ +...+.++..|....-.+ ......-.+|...|.|.+|+|+|+++|+|+.|++|++..+
T Consensus 39 ~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~f 118 (350)
T KOG0641|consen 39 AFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPF 118 (350)
T ss_pred EecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCCceEEEEec
Confidence 3577776633 445566776664321110 1222234589999999999999999999999999999988
Q ss_pred CCCCCCCcccccceeeecCCCCeEEEEEecC---CCCEEEEEE-CCCcEEEEECCCCceEEEeeccCccEEEEEEecCCC
Q 001366 809 NALFNDSVDVYYPAVEMSNRSKLSCVCWNNY---IKNYLASAD-YDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHP 884 (1092)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~---~~~~LaSgs-~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~ 884 (1092)
+....+.+ .......-|.+.|..++|..+ .+.+|++++ .|..|++-|..+|+.+..+.+|++.|.++-- .++
T Consensus 119 n~dt~~~~--g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilalys--wn~ 194 (350)
T KOG0641|consen 119 NADTCNAT--GHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILALYS--WNG 194 (350)
T ss_pred cccccccc--CcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEEEE--ecC
Confidence 75222111 111223458999999999654 356777765 4678888899999999999999999976532 267
Q ss_pred CEEEEEeCCCcEEEEecCCCceeeeEec--------CCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCC
Q 001366 885 TKLASGSDDCSVKLWNINEKNSLATIKN--------IANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGH 956 (1092)
Q Consensus 885 ~~laSgs~Dg~I~iWDl~~~~~l~~l~~--------~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H 956 (1092)
-++++||.|.+|++||++-..++.++.. .+.|.+++..|.|. +|++|..|....+||+|.++ ++..+..|
T Consensus 195 ~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgr-ll~sg~~dssc~lydirg~r-~iq~f~ph 272 (350)
T KOG0641|consen 195 AMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGR-LLASGHADSSCMLYDIRGGR-MIQRFHPH 272 (350)
T ss_pred cEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcc-eeeeccCCCceEEEEeeCCc-eeeeeCCC
Confidence 8999999999999999999999988862 25699999999995 99999999999999999875 57788899
Q ss_pred CCCeEEEEEcCCC-EEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeC
Q 001366 957 EKAVSYVKFLDSG-TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHR 1035 (1092)
Q Consensus 957 ~~~V~~v~fs~~~-~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~ 1035 (1092)
...|.||.|+|+. +++++|.|..|++-|+...-. ....+..+..|...+..+.|+|+.--+++.|.|.++.+|-+
T Consensus 273 sadir~vrfsp~a~yllt~syd~~ikltdlqgdla----~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 273 SADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLA----HELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWAL 348 (350)
T ss_pred ccceeEEEeCCCceEEEEecccceEEEeecccchh----hcCceEEEEeccCceEEEEecCccceeeeccCcceEEEecc
Confidence 9999999999665 689999999999999973211 12334566679999999999999988999999999999954
No 479
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.91 E-value=2e-22 Score=207.90 Aligned_cols=238 Identities=18% Similarity=0.288 Sum_probs=208.8
Q ss_pred ceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEe
Q 001366 821 PAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900 (1092)
Q Consensus 821 ~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWD 900 (1092)
|...++|..+++.|.++.+ +++|.||+.|.++.+|-...|+.+.++.+|++.|||++..- +...+++|+.|.++++||
T Consensus 3 pi~l~GHERplTqiKyN~e-GDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~-~s~~liTGSAD~t~kLWD 80 (327)
T KOG0643|consen 3 PILLQGHERPLTQIKYNRE-GDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDW-DSKHLITGSADQTAKLWD 80 (327)
T ss_pred ccccccCccccceEEecCC-CcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecC-CcceeeeccccceeEEEE
Confidence 4567789999999999998 99999999999999999889999999999999999999998 889999999999999999
Q ss_pred cCCCceeeeEecCCceEEEEEccCCCeEEEEEE-----CCCeEEEEEcCCC------CcceEEecCCCCCeEEEEEc-CC
Q 001366 901 INEKNSLATIKNIANVCCVQFSAHSSHLLAFGS-----ADYRTYCYDLRNA------RAPWCVLAGHEKAVSYVKFL-DS 968 (1092)
Q Consensus 901 l~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs-----~Dg~I~vwDlr~~------~~~~~~l~~H~~~V~~v~fs-~~ 968 (1092)
+.+|+++.+++.+..|..+.|+++|. +++... ..+.|.++|++.. +.|+..+..+.+.++.+-|. -+
T Consensus 81 v~tGk~la~~k~~~~Vk~~~F~~~gn-~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~ 159 (327)
T KOG0643|consen 81 VETGKQLATWKTNSPVKRVDFSFGGN-LILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLG 159 (327)
T ss_pred cCCCcEEEEeecCCeeEEEeeccCCc-EEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccC
Confidence 99999999999999999999999996 444443 3478999999943 34567777788999999998 67
Q ss_pred CEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccc
Q 001366 969 GTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGS 1048 (1092)
Q Consensus 969 ~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~ 1048 (1092)
++|++|..||.|..||++++. ..+.+-..|...|+.+.+++|..++++||.|.+-++||..+-+.+.++..
T Consensus 160 ~~ii~Ghe~G~is~~da~~g~-------~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~t-- 230 (327)
T KOG0643|consen 160 ETIIAGHEDGSISIYDARTGK-------ELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTT-- 230 (327)
T ss_pred CEEEEecCCCcEEEEEcccCc-------eeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeee--
Confidence 889999999999999999532 34555567999999999999999999999999999999999888888752
Q ss_pred cCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecC
Q 001366 1049 IDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSS 1083 (1092)
Q Consensus 1049 ~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~D 1083 (1092)
..+|++.+++|....++-|+..
T Consensus 231 -------------e~PvN~aaisP~~d~VilgGGq 252 (327)
T KOG0643|consen 231 -------------ERPVNTAAISPLLDHVILGGGQ 252 (327)
T ss_pred -------------cccccceecccccceEEecCCc
Confidence 4689999999988887776643
No 480
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.91 E-value=1.2e-22 Score=230.90 Aligned_cols=281 Identities=17% Similarity=0.275 Sum_probs=225.4
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCC----------CCEEEEEECCCcE
Q 001366 784 SISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI----------KNYLASADYDGVV 853 (1092)
Q Consensus 784 sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~----------~~~LaSgs~DgtV 853 (1092)
.+.|++..+.|.+.=.|..++|||+.... ..........|..-|++|.--|.+ ...++|||.|+||
T Consensus 329 A~~Fdet~~klscVYndhSlYvWDvrD~~----kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TI 404 (1080)
T KOG1408|consen 329 ACQFDETTDKLSCVYNDHSLYVWDVRDVN----KVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTI 404 (1080)
T ss_pred EEEecCCCceEEEEEcCceEEEEeccccc----cccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcE
Confidence 46799988899988899999999987521 111223345577777777655521 4579999999999
Q ss_pred EEEECCCCc---eE----------E------------------------EeeccCccEEEEEEecCCCCEEEEEeCCCcE
Q 001366 854 KLWDACTGQ---TV----------S------------------------HYIEHEKRAWSVDFSQVHPTKLASGSDDCSV 896 (1092)
Q Consensus 854 ~IWD~~tg~---~i----------~------------------------~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I 896 (1092)
|+||+..+. .. + ..-.....+.+++.+| ++.+||+|..-|++
T Consensus 405 RlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp-~gqhLAsGDr~Gnl 483 (1080)
T KOG1408|consen 405 RLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSP-DGQHLASGDRGGNL 483 (1080)
T ss_pred EEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECC-CcceecccCccCce
Confidence 999986521 10 0 0001233579999999 99999999999999
Q ss_pred EEEecCCCceeeeEe-cCCceEEEEEccC--CCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CC----
Q 001366 897 KLWNINEKNSLATIK-NIANVCCVQFSAH--SSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DS---- 968 (1092)
Q Consensus 897 ~iWDl~~~~~l~~l~-~~~~V~sl~fsp~--~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~---- 968 (1092)
+|||+..-+....+. |.+.|.|+.|+.. +..+||+++.|..|+|||+...-.++.++.+|...|++|+|. ++
T Consensus 484 rVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~ 563 (1080)
T KOG1408|consen 484 RVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRK 563 (1080)
T ss_pred EEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceE
Confidence 999999887777776 7889999999853 345899999999999999987666778889999999999985 22
Q ss_pred ---------------------------------------------CEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEc
Q 001366 969 ---------------------------------------------GTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFS 1003 (1092)
Q Consensus 969 ---------------------------------------------~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~ 1003 (1092)
+++++++.|..|+|||+. .++..+.|+
T Consensus 564 MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~--------sgKq~k~FK 635 (1080)
T KOG1408|consen 564 MISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIE--------SGKQVKSFK 635 (1080)
T ss_pred EEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEecc--------ccceeeeec
Confidence 357788888888888888 455667776
Q ss_pred C---CCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEE
Q 001366 1004 G---HTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAA 1080 (1092)
Q Consensus 1004 ~---h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasg 1080 (1092)
+ |.+...-+.+.|.|-||||...|.++.+||..+++++... .+|...|+.+.|.+|.+.|++.
T Consensus 636 gs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m--------------~GHsE~VTG~kF~nDCkHlISv 701 (1080)
T KOG1408|consen 636 GSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQM--------------TGHSEAVTGVKFLNDCKHLISV 701 (1080)
T ss_pred ccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhh--------------cCcchheeeeeecccchhheee
Confidence 5 6666777889999999999999999999999999887643 5889999999999999999999
Q ss_pred ecCCeEEEEEc
Q 001366 1081 NSSGCIKVLQM 1091 (1092)
Q Consensus 1081 s~DG~V~vW~l 1091 (1092)
+.||+|.||++
T Consensus 702 sgDgCIFvW~l 712 (1080)
T KOG1408|consen 702 SGDGCIFVWKL 712 (1080)
T ss_pred cCCceEEEEEC
Confidence 99999999986
No 481
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.91 E-value=1.2e-22 Score=243.79 Aligned_cols=274 Identities=17% Similarity=0.151 Sum_probs=215.2
Q ss_pred cCCeEEEEEcccceEE----ee-EE--eeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC-----------C
Q 001366 752 FDGLCKYARYSKFEVQ----GM-LR--TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALF-----------N 813 (1092)
Q Consensus 752 ~D~~~k~w~~~~~~~~----~~-l~--~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~-----------~ 813 (1092)
.|+.+.+|.....-.. .. +. ......|...|+|+.|+|||+|||+||+|+.|.||+..... .
T Consensus 35 ~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~ 114 (942)
T KOG0973|consen 35 LDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAK 114 (942)
T ss_pred ccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCccccccccccc
Confidence 6777889986432211 11 11 12345799999999999999999999999999999987310 0
Q ss_pred CCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCC
Q 001366 814 DSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDD 893 (1092)
Q Consensus 814 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~D 893 (1092)
............+|.+.|..++|+|+ +.+||++|.|++|.||+..+...+..+.+|...|-.+.|.| -|++|||-++|
T Consensus 115 ~vE~wk~~~~l~~H~~DV~Dv~Wsp~-~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP-~Gky~ASqsdD 192 (942)
T KOG0973|consen 115 NVESWKVVSILRGHDSDVLDVNWSPD-DSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDP-IGKYFASQSDD 192 (942)
T ss_pred ccceeeEEEEEecCCCccceeccCCC-ccEEEEecccceEEEEccccceeeeeeecccccccceEECC-ccCeeeeecCC
Confidence 11122234456789999999999997 99999999999999999999999999999999999999999 89999999999
Q ss_pred CcEEEEecCCCceeeeEec-------CCceEEEEEccCCCeEEEEEEC----CCeEEEEEcCCCCcceEEecCCCCCeEE
Q 001366 894 CSVKLWNINEKNSLATIKN-------IANVCCVQFSAHSSHLLAFGSA----DYRTYCYDLRNARAPWCVLAGHEKAVSY 962 (1092)
Q Consensus 894 g~I~iWDl~~~~~l~~l~~-------~~~V~sl~fsp~~~~~latgs~----Dg~I~vwDlr~~~~~~~~l~~H~~~V~~ 962 (1092)
++|+||++.+-...+++.. ...+..+.|+|||. +|++... -.++.|.+-.+.+ .-..+-||.+++.+
T Consensus 193 rtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~-~las~nA~n~~~~~~~IieR~tWk-~~~~LvGH~~p~ev 270 (942)
T KOG0973|consen 193 RTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGH-HLASPNAVNGGKSTIAIIERGTWK-VDKDLVGHSAPVEV 270 (942)
T ss_pred ceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcC-eecchhhccCCcceeEEEecCCce-eeeeeecCCCceEE
Confidence 9999999887666666652 23588999999995 7766543 4467887765544 34567899999999
Q ss_pred EEEc------CCC------------EEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEc-CCCCCeEEEEEecCCCEEEE
Q 001366 963 VKFL------DSG------------TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFS-GHTNEKNFVGLSTADGYIAC 1023 (1092)
Q Consensus 963 v~fs------~~~------------~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~-~h~~~V~~v~~spdg~~las 1023 (1092)
++|+ +.+ .+++||.|++|-||..... .++.... -....|..++|+|||-.|.+
T Consensus 271 vrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~--------RPl~vi~~lf~~SI~DmsWspdG~~Lfa 342 (942)
T KOG0973|consen 271 VRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALP--------RPLFVIHNLFNKSIVDMSWSPDGFSLFA 342 (942)
T ss_pred EEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCC--------CchhhhhhhhcCceeeeeEcCCCCeEEE
Confidence 9996 222 5789999999999998732 3333332 24567999999999999999
Q ss_pred EecCCcEEEEeCCC
Q 001366 1024 GSESNEVYAYHRSL 1037 (1092)
Q Consensus 1024 gs~Dg~I~Iwd~~~ 1037 (1092)
+|.||+|.++++..
T Consensus 343 cS~DGtV~~i~Fee 356 (942)
T KOG0973|consen 343 CSLDGTVALIHFEE 356 (942)
T ss_pred EecCCeEEEEEcch
Confidence 99999999998764
No 482
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.90 E-value=1e-24 Score=242.45 Aligned_cols=243 Identities=17% Similarity=0.204 Sum_probs=178.6
Q ss_pred cceeeeCCCCCccccccccccccccccccCch-hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcccc
Q 001366 223 KGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWI 301 (1092)
Q Consensus 223 ~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (1092)
+|+||-|.-. -.++.+|+|+.--..-.. +....-.++++|....||-|+.+.-. .+...++
T Consensus 577 FG~VYgg~hR----ktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M--------~ET~erv------ 638 (888)
T KOG4236|consen 577 FGTVYGGKHR----KTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECM--------FETPERV------ 638 (888)
T ss_pred ceeeecceec----ccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEe--------ecCCceE------
Confidence 7999999862 346777776542221111 22334456677888899988853211 1111111
Q ss_pred CCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC---CcEEEeccccccc
Q 001366 302 GGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS---NQVKYIGPIIQKE 378 (1092)
Q Consensus 302 ~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~---~~vkl~Dfg~~~~ 378 (1092)
.++||-+.|-=|.-.|......+++.....++.|||.||.|||-++|+|+||||+||||... -++|++|||.||.
T Consensus 639 --FVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARi 716 (888)
T KOG4236|consen 639 --FVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARI 716 (888)
T ss_pred --EEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceee
Confidence 24677776655554454444456676888999999999999999999999999999999743 5799999999999
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+++.. +|
T Consensus 717 IgEks-----------FR-------------------------------------------------------------- 723 (888)
T KOG4236|consen 717 IGEKS-----------FR-------------------------------------------------------------- 723 (888)
T ss_pred cchhh-----------hh--------------------------------------------------------------
Confidence 87421 00
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
.+.+|||.|.|||+|+...|..+-|+||+|||+|--|.| |..+++.
T Consensus 724 -------------------------------rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI 772 (888)
T KOG4236|consen 724 -------------------------------RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI 772 (888)
T ss_pred -------------------------------hhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccch
Confidence 167999999999999999999999999999999998876 4444444
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
...+++..--..|..+...++...+||..+|+..-.+|.|....|.|||+++.+
T Consensus 773 ndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 773 NDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred hHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 444443333334556778889999999999999999999999999999998753
No 483
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=1.1e-21 Score=205.49 Aligned_cols=300 Identities=17% Similarity=0.233 Sum_probs=230.8
Q ss_pred hhhhccchhhhhhccccccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Q 001366 724 DLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKI 803 (1092)
Q Consensus 724 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I 803 (1092)
..+.+|.+-+..+.. +...| -.-+++.|.+..+|.+....+.. .+.+|.+.|+||.|++.+.++++++.|++.
T Consensus 142 re~~GHkDGiW~Vaa-~~tqp-i~gtASADhTA~iWs~Esg~CL~-----~Y~GH~GSVNsikfh~s~~L~lTaSGD~ta 214 (481)
T KOG0300|consen 142 RELEGHKDGIWHVAA-DSTQP-ICGTASADHTARIWSLESGACLA-----TYTGHTGSVNSIKFHNSGLLLLTASGDETA 214 (481)
T ss_pred hhhcccccceeeehh-hcCCc-ceeecccccceeEEeecccccee-----eecccccceeeEEeccccceEEEccCCcch
Confidence 345666665543322 11111 22367899999999988776654 466999999999999999999999999999
Q ss_pred EEEEc------CCCC-------C-------------C---Ccc---cccce-eeecCCCCeEEEEEecCCCCEEEEEECC
Q 001366 804 KIFEF------NALF-------N-------------D---SVD---VYYPA-VEMSNRSKLSCVCWNNYIKNYLASADYD 850 (1092)
Q Consensus 804 ~Iwd~------~~~~-------~-------------~---~~~---~~~~~-~~~~h~~~V~~v~~sp~~~~~LaSgs~D 850 (1092)
.||.. .... . + ..+ ...|. ...+|.+.|.+..|... ++.++++|+|
T Consensus 215 HIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~g-g~Q~vTaSWD 293 (481)
T KOG0300|consen 215 HIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAG-GQQMVTASWD 293 (481)
T ss_pred HHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcC-cceeeeeecc
Confidence 99972 1100 0 0 011 12222 24578999999999886 8899999999
Q ss_pred CcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCC-ceeeeEe-cCCceEEEEEccCCCeE
Q 001366 851 GVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEK-NSLATIK-NIANVCCVQFSAHSSHL 928 (1092)
Q Consensus 851 gtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~-~~l~~l~-~~~~V~sl~fsp~~~~~ 928 (1092)
.+..+||+++|..+..+.||....+-++-+| ...++++.|.|.+.++||++.. ..+..|+ |...|+++.|.-+. .
T Consensus 294 RTAnlwDVEtge~v~~LtGHd~ELtHcstHp-tQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd--~ 370 (481)
T KOG0300|consen 294 RTANLWDVETGEVVNILTGHDSELTHCSTHP-TQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDD--R 370 (481)
T ss_pred ccceeeeeccCceeccccCcchhccccccCC-cceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCC--c
Confidence 9999999999999999999999999999999 7889999999999999999843 3455666 67889999999887 5
Q ss_pred EEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCC-EEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCC
Q 001366 929 LAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSG-TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTN 1007 (1092)
Q Consensus 929 latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~-~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~ 1007 (1092)
+++|+.|.+|++||+++...++.++.- .+++..++.+.+. .|+.--....|++||+..... ...+...-.+|..
T Consensus 371 vVSgSDDrTvKvWdLrNMRsplATIRt-dS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~Rl----aRlPrtsRqgHrR 445 (481)
T KOG0300|consen 371 VVSGSDDRTVKVWDLRNMRSPLATIRT-DSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRL----ARLPRTSRQGHRR 445 (481)
T ss_pred eeecCCCceEEEeeeccccCcceeeec-CCccceeEeecCCceEEeccCCceEEEEecCCCcc----ccCCcccccccce
Confidence 999999999999999999888888764 5678899998666 555555667899999984321 1122234568999
Q ss_pred CeEEEEEecCC--CEEEEEecCCcEEEEeCCCCC
Q 001366 1008 EKNFVGLSTAD--GYIACGSESNEVYAYHRSLPM 1039 (1092)
Q Consensus 1008 ~V~~v~~spdg--~~lasgs~Dg~I~Iwd~~~~~ 1039 (1092)
-|.|++|..+. .-|.+++.|..+.-|.++.+.
T Consensus 446 MV~c~AW~eehp~cnLftcGFDR~v~gW~in~p~ 479 (481)
T KOG0300|consen 446 MVTCCAWLEEHPACNLFTCGFDRMVAGWKINTPT 479 (481)
T ss_pred eeeeeeccccCcccccccccccceeeeeEecccC
Confidence 99999998653 357788899999999887653
No 484
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=5.5e-23 Score=209.65 Aligned_cols=252 Identities=19% Similarity=0.247 Sum_probs=200.1
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEE-ecCCCCEEEEEECCCcEE
Q 001366 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCW-NNYIKNYLASADYDGVVK 854 (1092)
Q Consensus 776 ~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~-sp~~~~~LaSgs~DgtV~ 854 (1092)
..|.+.|..+..+--|+.|||++.|++|+||.+... ........+.+|.++|..++| +|.-+.+||||++||.|.
T Consensus 8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n----~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVI 83 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNN----GQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVI 83 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCC----CCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEE
Confidence 368888988888889999999999999999998752 122344567799999999999 455599999999999999
Q ss_pred EEECCCCc--eEEEeeccCccEEEEEEecCC-CCEEEEEeCCCcEEEEecCCC-c-eeeeE--ecCCceEEEEEccC---
Q 001366 855 LWDACTGQ--TVSHYIEHEKRAWSVDFSQVH-PTKLASGSDDCSVKLWNINEK-N-SLATI--KNIANVCCVQFSAH--- 924 (1092)
Q Consensus 855 IWD~~tg~--~i~~l~~h~~~V~sv~fsp~~-~~~laSgs~Dg~I~iWDl~~~-~-~l~~l--~~~~~V~sl~fsp~--- 924 (1092)
||.-..|+ ....+..|...|++|+|.|.. +-.|+++|.||.|.|.+.+.. . ....+ .|.-.|++++|.|.
T Consensus 84 iWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~ 163 (299)
T KOG1332|consen 84 IWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAP 163 (299)
T ss_pred EEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCC
Confidence 99988775 344567899999999999943 456899999999999998765 1 22222 26778999999996
Q ss_pred C----------CeEEEEEECCCeEEEEEcCCCCc-ceEEecCCCCCeEEEEEcCC-----CEEEEEECCCeEEEEEcCCC
Q 001366 925 S----------SHLLAFGSADYRTYCYDLRNARA-PWCVLAGHEKAVSYVKFLDS-----GTLVTASTDNKLKLWDLKRT 988 (1092)
Q Consensus 925 ~----------~~~latgs~Dg~I~vwDlr~~~~-~~~~l~~H~~~V~~v~fs~~-----~~L~Sgs~Dg~I~vWDl~~~ 988 (1092)
| ...|++|+.|+.|+||+..+..- .-.++.+|...|+.++|.|. .+|+|+|.||++.||-.+..
T Consensus 164 g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e 243 (299)
T KOG1332|consen 164 GSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEE 243 (299)
T ss_pred ccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCc
Confidence 3 13599999999999999987532 23458999999999999733 47999999999999998722
Q ss_pred CCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCC
Q 001366 989 SHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRS 1036 (1092)
Q Consensus 989 ~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~ 1036 (1092)
...-.. ..++.....++.++||+.|.+|+.++.|+.|.+|--+
T Consensus 244 --~e~wk~---tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 244 --YEPWKK---TLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred --cCcccc---cccccCCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence 111122 2333456689999999999999999999999999643
No 485
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.90 E-value=5.4e-24 Score=215.97 Aligned_cols=209 Identities=13% Similarity=0.183 Sum_probs=155.9
Q ss_pred hhhhhhhccCC-CCCCCccccceecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHH
Q 001366 260 AAGAMMVASNA-SPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (1092)
Q Consensus 260 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qi 338 (1092)
.++.+.+.-.. +|||+++++...-. ....|+. ..||.+..+.+.+-. .++..+++.++.||
T Consensus 80 kREikIL~nL~gg~NIi~L~DiV~Dp-------~SktpaL-------iFE~v~n~Dfk~ly~----tl~d~dIryY~~el 141 (338)
T KOG0668|consen 80 KREIKILQNLRGGPNIIKLLDIVKDP-------ESKTPSL-------IFEYVNNTDFKQLYP----TLTDYDIRYYIYEL 141 (338)
T ss_pred HHHHHHHHhccCCCCeeehhhhhcCc-------cccCchh-------HhhhhccccHHHHhh----hhchhhHHHHHHHH
Confidence 34555566665 99999877765421 2334444 689999999887653 45666899999999
Q ss_pred HHHHHHhhhcCccccCCCCCCeEEccC-CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhccc
Q 001366 339 VALVDYHHTQGVTFLDLKPSSFKLLQS-NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKF 417 (1092)
Q Consensus 339 l~~l~~lHs~gIvHrDLKP~Nill~~~-~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (1092)
+.||+|||++||+|||+||.|++|+.. -.+++||.|+|.....
T Consensus 142 LkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp------------------------------------ 185 (338)
T KOG0668|consen 142 LKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP------------------------------------ 185 (338)
T ss_pred HHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCC------------------------------------
Confidence 999999999999999999999999965 4599999999977541
Q ss_pred ccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCccccccccccccccccccccc
Q 001366 418 NHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKW 497 (1092)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 497 (1092)
....+..+-++.
T Consensus 186 --------------------------------------------------------------------~~eYnVRVASRy 197 (338)
T KOG0668|consen 186 --------------------------------------------------------------------GKEYNVRVASRY 197 (338)
T ss_pred --------------------------------------------------------------------Cceeeeeeehhh
Confidence 112235667888
Q ss_pred ccCcccccC-CCCCccccchhhhHHHHHHcC---C-CCcHHHHHHHHHhccc--------------cCCCCC--------
Q 001366 498 YASPEELSG-GVCTTSSNIYSLGVLFFELFG---R-FDSERALAAAMSDLRD--------------RILPPS-------- 550 (1092)
Q Consensus 498 Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~---~-f~~~~~~~~~~~~~~~--------------~~~p~~-------- 550 (1092)
|.-||++.+ ..|+.+-|+|||||+|..|+. | |.+.....++.+..+. -.++|.
T Consensus 198 fKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~ 277 (338)
T KOG0668|consen 198 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRH 277 (338)
T ss_pred cCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhcc
Confidence 999999988 568999999999999999986 3 4444333333221110 112222
Q ss_pred -------------CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 551 -------------FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 551 -------------~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
-.-.+|+..+|+.++|.+|-.+|+||.|++.||||....+
T Consensus 278 ~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~ 330 (338)
T KOG0668|consen 278 SRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVRE 330 (338)
T ss_pred ccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHH
Confidence 1223588999999999999999999999999999976543
No 486
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.90 E-value=2.9e-21 Score=224.81 Aligned_cols=315 Identities=16% Similarity=0.166 Sum_probs=238.5
Q ss_pred CCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceee
Q 001366 745 TDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE 824 (1092)
Q Consensus 745 ~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~ 824 (1092)
+..+.++.+|.+++|.+...++.- .+.++.+.|+++.=+|-=+.+|.|..+|+|.|+++... .....
T Consensus 173 NKIvvGs~~G~lql~Nvrt~K~v~-----~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~d--------kil~s 239 (910)
T KOG1539|consen 173 NKIVVGSSQGRLQLWNVRTGKVVY-----TFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFD--------KILMS 239 (910)
T ss_pred eeEEEeecCCcEEEEEeccCcEEE-----EecccccceeEeccCCcceEEEEeccCceEEEEEcccC--------cEEEE
Confidence 456677899999999988766554 45578899999999998899999999999999998751 22334
Q ss_pred ecCC-CCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEee-ccCccEEEEEEecCCCCEEEEEeCCCcEEE----
Q 001366 825 MSNR-SKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYI-EHEKRAWSVDFSQVHPTKLASGSDDCSVKL---- 898 (1092)
Q Consensus 825 ~~h~-~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~-~h~~~V~sv~fsp~~~~~laSgs~Dg~I~i---- 898 (1092)
+.|. ++|+.++|..|+...+|+|+..|.+.+||++..+.+..+. .|.+.|....|.| ....+++++.|+.+++
T Consensus 240 Fk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~-~epVl~ta~~DnSlk~~vfD 318 (910)
T KOG1539|consen 240 FKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLP-GEPVLVTAGADNSLKVWVFD 318 (910)
T ss_pred EEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecC-CCceEeeccCCCceeEEEee
Confidence 4454 9999999999978889999999999999998765444333 4444444444444 3334444444444444
Q ss_pred -------------------------------------------EecCC--------------------------------
Q 001366 899 -------------------------------------------WNINE-------------------------------- 903 (1092)
Q Consensus 899 -------------------------------------------WDl~~-------------------------------- 903 (1092)
+++..
T Consensus 319 ~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i 398 (910)
T KOG1539|consen 319 SGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPI 398 (910)
T ss_pred CCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcc
Confidence 33211
Q ss_pred ---------------------------------Cce-eeeEecC------CceEEEEEccCCCeEEEEEECCCeEEEEEc
Q 001366 904 ---------------------------------KNS-LATIKNI------ANVCCVQFSAHSSHLLAFGSADYRTYCYDL 943 (1092)
Q Consensus 904 ---------------------------------~~~-l~~l~~~------~~V~sl~fsp~~~~~latgs~Dg~I~vwDl 943 (1092)
... .+++.+. ..+++++.++.|+ +.+.|+..|.|-+|++
T Consensus 399 ~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGN-F~~IG~S~G~Id~fNm 477 (910)
T KOG1539|consen 399 VEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGN-FVFIGYSKGTIDRFNM 477 (910)
T ss_pred eeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCc-eEEEeccCCeEEEEEc
Confidence 000 0111111 3577888999884 8888999999999999
Q ss_pred CCCCcceEEe---cCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCC---------------------------
Q 001366 944 RNARAPWCVL---AGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTG--------------------------- 992 (1092)
Q Consensus 944 r~~~~~~~~l---~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~--------------------------- 992 (1092)
.++-. ...+ ..|..+|+.++.. -+..++|++.+|.+++||..+.....
T Consensus 478 QSGi~-r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf 556 (910)
T KOG1539|consen 478 QSGIH-RKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDF 556 (910)
T ss_pred ccCee-ecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCce
Confidence 98743 3344 5899999999987 66789999999999999998543100
Q ss_pred ------CCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEE
Q 001366 993 ------PSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVS 1066 (1092)
Q Consensus 993 ------~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~ 1066 (1092)
..+...++.+.||.+.|+.++|||||++|++++.|++|++||+.++..|-.+.+ ..++.
T Consensus 557 ~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~v---------------d~~~~ 621 (910)
T KOG1539|consen 557 SIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLV---------------DSPCT 621 (910)
T ss_pred eEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEec---------------CCcce
Confidence 012345677889999999999999999999999999999999999998887764 46789
Q ss_pred EEEEeCCCCEEEEEecC-CeEEEEE
Q 001366 1067 SVCWRRRSDMVVAANSS-GCIKVLQ 1090 (1092)
Q Consensus 1067 sva~spd~~~Lasgs~D-G~V~vW~ 1090 (1092)
++.|+|+|.+|||+..| .-|++|-
T Consensus 622 sls~SPngD~LAT~Hvd~~gIylWs 646 (910)
T KOG1539|consen 622 SLSFSPNGDFLATVHVDQNGIYLWS 646 (910)
T ss_pred eeEECCCCCEEEEEEecCceEEEEE
Confidence 99999999999999999 5688884
No 487
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.90 E-value=1.2e-22 Score=212.62 Aligned_cols=279 Identities=15% Similarity=0.228 Sum_probs=217.9
Q ss_pred cCCCCcE--EeEcCCeEEEEEcccceEEe----e---------EEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 001366 742 QNPTDRL--GAFFDGLCKYARYSKFEVQG----M---------LRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIF 806 (1092)
Q Consensus 742 ~~~~~~l--~~~~D~~~k~w~~~~~~~~~----~---------l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iw 806 (1092)
+++++.| .++.|.++|+.+..+.-... . -...+|..|.+.|+++.|+|....|++|+.|++|++|
T Consensus 120 fs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlF 199 (430)
T KOG0640|consen 120 FSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLF 199 (430)
T ss_pred eCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEeccCCCeEEEE
Confidence 4677766 55788999998875221111 0 0113577899999999999999999999999999999
Q ss_pred EcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEe---eccCccEEEEEEecCC
Q 001366 807 EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHY---IEHEKRAWSVDFSQVH 883 (1092)
Q Consensus 807 d~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l---~~h~~~V~sv~fsp~~ 883 (1092)
|+.... .......+....+|.++.|+|. |.+|+.|..-.++++||+++-+|...- .+|++.|++|.+++ .
T Consensus 200 DfsK~s-----aKrA~K~~qd~~~vrsiSfHPs-GefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~-t 272 (430)
T KOG0640|consen 200 DFSKTS-----AKRAFKVFQDTEPVRSISFHPS-GEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSS-T 272 (430)
T ss_pred ecccHH-----HHHHHHHhhccceeeeEeecCC-CceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecC-C
Confidence 997521 1112223445788999999998 999999999999999999999987654 36999999999999 8
Q ss_pred CCEEEEEeCCCcEEEEecCCCceeeeEe---cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCC----
Q 001366 884 PTKLASGSDDCSVKLWNINEKNSLATIK---NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGH---- 956 (1092)
Q Consensus 884 ~~~laSgs~Dg~I~iWDl~~~~~l~~l~---~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H---- 956 (1092)
+++.++||.||.|++||--+++|+.++. ..+.|++..|..++. ++++.+.|..|++|.+.+++.. ..+.|-
T Consensus 273 ~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~k-yiLsSG~DS~vkLWEi~t~R~l-~~YtGAg~tg 350 (430)
T KOG0640|consen 273 GSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGK-YILSSGKDSTVKLWEISTGRML-KEYTGAGTTG 350 (430)
T ss_pred ccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCe-EEeecCCcceeeeeeecCCceE-EEEecCCccc
Confidence 9999999999999999999999999997 356899999999995 8999999999999999998753 333322
Q ss_pred -CCCeEEEEEc-CCCEEEEEE-CCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEE
Q 001366 957 -EKAVSYVKFL-DSGTLVTAS-TDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAY 1033 (1092)
Q Consensus 957 -~~~V~~v~fs-~~~~L~Sgs-~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iw 1033 (1092)
..--+...|+ ..++++.-. ..+.+.-||.++... ....-.+|.+.+..+.-||.+.-+++||.|-.+++|
T Consensus 351 rq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr-------~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFW 423 (430)
T KOG0640|consen 351 RQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADR-------VALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFW 423 (430)
T ss_pred chhhhhhhhhcCccceEEccccccCceeeccccchhh-------hhhcccCCCCCceEEEeCCCCCceeeecccceeeee
Confidence 1112334455 445555443 457799999995431 112234799999999999999999999999999999
Q ss_pred eCC
Q 001366 1034 HRS 1036 (1092)
Q Consensus 1034 d~~ 1036 (1092)
...
T Consensus 424 yrr 426 (430)
T KOG0640|consen 424 YRR 426 (430)
T ss_pred eec
Confidence 743
No 488
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=7.8e-23 Score=232.14 Aligned_cols=330 Identities=13% Similarity=0.184 Sum_probs=246.1
Q ss_pred CcEEeEcCCeEEEEEcccceEEeeEE-eeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceee
Q 001366 746 DRLGAFFDGLCKYARYSKFEVQGMLR-TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE 824 (1092)
Q Consensus 746 ~~l~~~~D~~~k~w~~~~~~~~~~l~-~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~ 824 (1092)
..+++..||.++.|......-...-. ...+..|.++|+.+....+++.|++++.|-+|++|+..... ..+....
T Consensus 39 yLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~-----~~c~sti 113 (735)
T KOG0308|consen 39 YLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDN-----TFCMSTI 113 (735)
T ss_pred eEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCc-----chhHhhh
Confidence 35688999999999975433221122 33577899999999999999999999999999999986521 2344556
Q ss_pred ecCCCCeEEEEE-ecCCCCEEEEEECCCcEEEEECCCCc--eE--------EEee-ccCccEEEEEEecCCCCEEEEEeC
Q 001366 825 MSNRSKLSCVCW-NNYIKNYLASADYDGVVKLWDACTGQ--TV--------SHYI-EHEKRAWSVDFSQVHPTKLASGSD 892 (1092)
Q Consensus 825 ~~h~~~V~~v~~-sp~~~~~LaSgs~DgtV~IWD~~tg~--~i--------~~l~-~h~~~V~sv~fsp~~~~~laSgs~ 892 (1092)
-.|+..|.|++. .++ ...+||||.|+.|.|||++++. .+ ..+. ++...|++++.++ .+..+++|+.
T Consensus 114 r~H~DYVkcla~~ak~-~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~-t~t~ivsGgt 191 (735)
T KOG0308|consen 114 RTHKDYVKCLAYIAKN-NELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQ-TGTIIVSGGT 191 (735)
T ss_pred hcccchheeeeecccC-ceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCC-cceEEEecCc
Confidence 679999999998 554 8899999999999999999872 22 2233 7888999999999 7899999999
Q ss_pred CCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCE
Q 001366 893 DCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGT 970 (1092)
Q Consensus 893 Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~ 970 (1092)
.+.+++||.++++.+..+. |..+|.++-.+++|. .+++++.||+|++||++..+ .+.++..|...|+++..+ +-.+
T Consensus 192 ek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt-~~ls~sSDgtIrlWdLgqQr-Cl~T~~vH~e~VWaL~~~~sf~~ 269 (735)
T KOG0308|consen 192 EKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGT-RLLSASSDGTIRLWDLGQQR-CLATYIVHKEGVWALQSSPSFTH 269 (735)
T ss_pred ccceEEeccccccceeeeeccccceEEEEEcCCCC-eEeecCCCceEEeeeccccc-eeeeEEeccCceEEEeeCCCcce
Confidence 9999999999999888887 678999999999995 89999999999999999766 467889999999999987 5568
Q ss_pred EEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeee---cc
Q 001366 971 LVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYK---FG 1047 (1092)
Q Consensus 971 L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~---~~ 1047 (1092)
+++|+.||.|..-|+++.. .+...+ ....+|..+..+.+..-+-+++.|+.|+-|-...--.+.... +-
T Consensus 270 vYsG~rd~~i~~Tdl~n~~-------~~tlic-k~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~~~l~~s~~~~~~ 341 (735)
T KOG0308|consen 270 VYSGGRDGNIYRTDLRNPA-------KSTLIC-KEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPDIALSVSGDLDFF 341 (735)
T ss_pred EEecCCCCcEEecccCCch-------hheEee-cCCCchhhhhhccccCCceeeeccccceecCCccccccccCCCCCcc
Confidence 9999999999999999531 222222 234556666666544445677889999999643221111100 00
Q ss_pred ccCCCCCcc-------ccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEcC
Q 001366 1048 SIDPISGKE-------TDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQMV 1092 (1092)
Q Consensus 1048 ~~~~i~~~~-------~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~lv 1092 (1092)
+.+....-+ .....+..|...+.-.|.+.++|=...|.+.+||++
T Consensus 342 ~T~~~~~~~~~~~tp~~vi~Gg~ai~k~~mL~dkRhVlTkDa~gnv~lwDIl 393 (735)
T KOG0308|consen 342 STDSNNHSCDLTNTPDSVIPGGAAIKKHAMLNDKRHVLTKDAKGNVALWDIL 393 (735)
T ss_pred cccCCCccccccCCCceeccCchhhhhhhhhcCcceEeeecCCCCEEEEEee
Confidence 001100000 001112234455556688899999999999999985
No 489
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.90 E-value=9.2e-21 Score=206.72 Aligned_cols=270 Identities=18% Similarity=0.223 Sum_probs=223.3
Q ss_pred CCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceee
Q 001366 745 TDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE 824 (1092)
Q Consensus 745 ~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~ 824 (1092)
+..+.+.-|....+.+........ .|.+|...|+++.|+|+...+++++.|..|+||.... ...+...
T Consensus 232 ~~ilTGG~d~~av~~d~~s~q~l~-----~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~-------~s~~~~~ 299 (506)
T KOG0289|consen 232 SKILTGGEDKTAVLFDKPSNQILA-----TLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPL-------SSEPTSS 299 (506)
T ss_pred CcceecCCCCceEEEecchhhhhh-----hccCcceEEEEEEeccchhheeecCCcceEEeecccc-------ccCcccc
Confidence 345566677677777765544433 3669999999999999999999999999999999764 2345566
Q ss_pred ecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeecc--CccEEEEEEecCCCCEEEEEeCCCcEEEEecC
Q 001366 825 MSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEH--EKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN 902 (1092)
Q Consensus 825 ~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h--~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~ 902 (1092)
..|.++|+.+..+|. +.+|+++|.||+..+.|+.+|..+...... .-.+++..|+| ||.+|++|..|+.|+|||+.
T Consensus 300 ~~h~~~V~~ls~h~t-geYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHp-DgLifgtgt~d~~vkiwdlk 377 (506)
T KOG0289|consen 300 RPHEEPVTGLSLHPT-GEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHP-DGLIFGTGTPDGVVKIWDLK 377 (506)
T ss_pred ccccccceeeeeccC-CcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcC-CceEEeccCCCceEEEEEcC
Confidence 679999999999998 999999999999999999999887665432 23489999999 99999999999999999999
Q ss_pred CCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeE
Q 001366 903 EKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKL 980 (1092)
Q Consensus 903 ~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I 980 (1092)
++..+..|. |.++|..++|+-+| ++|++++.|+.|++||+|..+............|.++.|. .+.+|+.++.|=+|
T Consensus 378 s~~~~a~Fpght~~vk~i~FsENG-Y~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~V 456 (506)
T KOG0289|consen 378 SQTNVAKFPGHTGPVKAISFSENG-YWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQV 456 (506)
T ss_pred CccccccCCCCCCceeEEEeccCc-eEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEE
Confidence 999888887 67899999999998 7999999999999999998765333333344579999998 77889989887677
Q ss_pred EEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeC
Q 001366 981 KLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHR 1035 (1092)
Q Consensus 981 ~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~ 1035 (1092)
.+++-.+. ...++..+..|.+..+.+.|.....++++||.|..+++|.+
T Consensus 457 y~~~k~~k------~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 457 YICKKKTK------SWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred EEEecccc------cceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence 77764422 45677888889989999999999999999999999888853
No 490
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.90 E-value=3.4e-22 Score=211.46 Aligned_cols=304 Identities=20% Similarity=0.311 Sum_probs=235.3
Q ss_pred eecCCCCCEEEEEEcC-----CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCC---CCEEE
Q 001366 774 EFNNSANVICSISFDR-----DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI---KNYLA 845 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fsp-----dg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~---~~~La 845 (1092)
....|..+|..++|++ ....+||+|.+ .+.||+...... .........-.+......++|.-+. .-++|
T Consensus 33 l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~~-rvtiy~c~~d~~--ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la 109 (385)
T KOG1034|consen 33 LKEDHNKPIFGVAFNSFLGCDEPQVFATVGGN-RVTIYECPGDGG--IRLLQSYADEDHDESFYTCSWSYDSNTGNPFLA 109 (385)
T ss_pred hhccCCCccceeeeehhcCCCCCceEEEeCCc-EEEEEEECCccc--eeeeeeccCCCCCcceEEEEEEecCCCCCeeEE
Confidence 3458899999999985 34578887754 799998865220 0111111112367788899997652 44889
Q ss_pred EEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe----cCCceEEEEE
Q 001366 846 SADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK----NIANVCCVQF 921 (1092)
Q Consensus 846 Sgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~----~~~~V~sl~f 921 (1092)
.++.-|.|+|.|+.++++...+.+|...|+.+.|+|.+++++++||.|.+|++|++++..|+..|. |...|.++.|
T Consensus 110 ~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~ 189 (385)
T KOG1034|consen 110 AGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDF 189 (385)
T ss_pred eecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999987 5678999999
Q ss_pred ccCCCeEEEEEECCCeEEEEEcCCCCc--------------------------c-eEEecCCCCCeEEEEEcCCCEEEEE
Q 001366 922 SAHSSHLLAFGSADYRTYCYDLRNARA--------------------------P-WCVLAGHEKAVSYVKFLDSGTLVTA 974 (1092)
Q Consensus 922 sp~~~~~latgs~Dg~I~vwDlr~~~~--------------------------~-~~~l~~H~~~V~~v~fs~~~~L~Sg 974 (1092)
+++|. .+++++.|..+++|++...+- + ..+..-|+..|-|+.|. +++++|-
T Consensus 190 ~~~gd-~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~-gd~ilSk 267 (385)
T KOG1034|consen 190 SLDGD-RIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF-GDFILSK 267 (385)
T ss_pred cCCCC-eeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH-hhheeec
Confidence 99996 999999999999999983210 0 11334588889999987 6899999
Q ss_pred ECCCeEEEEEcCCCCC------CCCCCCceeEEEcCCCCCeEEEEEecC--CCEEEEEecCCcEEEEeCCCCCceeeeec
Q 001366 975 STDNKLKLWDLKRTSH------TGPSTNACSLTFSGHTNEKNFVGLSTA--DGYIACGSESNEVYAYHRSLPMPITSYKF 1046 (1092)
Q Consensus 975 s~Dg~I~vWDl~~~~~------~~~~~~~~~~~l~~h~~~V~~v~~spd--g~~lasgs~Dg~I~Iwd~~~~~~i~~~~~ 1046 (1092)
|-++.|..|...+.+. ........+.++.-....++.+.|+-| +++||+|...|.|++||+....+.....
T Consensus 268 scenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~tt- 346 (385)
T KOG1034|consen 268 SCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTT- 346 (385)
T ss_pred ccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCce-
Confidence 9999999998843221 111222344566666677888866654 8899999999999999998766531111
Q ss_pred cccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEcC
Q 001366 1047 GSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQMV 1092 (1092)
Q Consensus 1047 ~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~lv 1092 (1092)
......+..|...+|+.|+.+|+..+.||.|.-|+.|
T Consensus 347 ---------l~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 347 ---------LTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred ---------EEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 0112235679999999999999999999999999864
No 491
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.3e-24 Score=224.94 Aligned_cols=251 Identities=17% Similarity=0.152 Sum_probs=168.6
Q ss_pred cccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
+.+|||+--.. +.-+.+++.|-+..-- .-....+-+++.+++..-+|.|..+.++.-.. ..++.+
T Consensus 64 GAFGVVWsVTD----PRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQP---------ph~dfF- 129 (449)
T KOG0664|consen 64 GAFGVVWSVTD----PRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQP---------ANPSFF- 129 (449)
T ss_pred cceeEEEeccC----CCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCC---------CCchHH-
Confidence 56799996544 2224444443321111 11223567888999999999998765554221 111111
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
..- .+..+...-+|...|-+.. .++...+.-+++||++||.|||+.||.||||||.|+|+..+..+||+|||++|.-
T Consensus 130 -qEi-YV~TELmQSDLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 130 -QEL-YVLTELMQSDLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred -HHH-HHHHHHHHhhhhheeccCC-CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEeccccccccc
Confidence 111 1122234456766665554 3556588889999999999999999999999999999999999999999999863
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
..
T Consensus 207 e~------------------------------------------------------------------------------ 208 (449)
T KOG0664|consen 207 DQ------------------------------------------------------------------------------ 208 (449)
T ss_pred ch------------------------------------------------------------------------------
Confidence 30
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
.....++..+-|.+|+|||++.| ..|+.++||||+|||+.|||.+ |......
T Consensus 209 ------------------------d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Pi 264 (449)
T KOG0664|consen 209 ------------------------RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPI 264 (449)
T ss_pred ------------------------hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChH
Confidence 01223445677899999999999 6699999999999999999974 3322221
Q ss_pred HHH--------------H---------HhccccCCCCCCC---------CCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 536 AAA--------------M---------SDLRDRILPPSFL---------SENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 536 ~~~--------------~---------~~~~~~~~p~~~~---------~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
.+. | ..++....+|.+. ....+...++..||+++|.+|.+..+.+.|+
T Consensus 265 qQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 265 EQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred HHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 111 1 1223333344432 1223456888999999999999999999999
Q ss_pred hhhhhhc
Q 001366 584 VTNEFQE 590 (1092)
Q Consensus 584 ~~~~~~~ 590 (1092)
+..+.+.
T Consensus 345 ~~~e~R~ 351 (449)
T KOG0664|consen 345 YLEEGRL 351 (449)
T ss_pred cccccce
Confidence 9877654
No 492
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.90 E-value=2.8e-22 Score=229.35 Aligned_cols=257 Identities=19% Similarity=0.290 Sum_probs=212.8
Q ss_pred cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEE-EEEcC-CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceee
Q 001366 747 RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICS-ISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE 824 (1092)
Q Consensus 747 ~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~s-l~fsp-dg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~ 824 (1092)
.++++.|+++++|.-..- .-+.++.+.+|.+.|.+ +++.+ ++-.+++|+.|.+|.+|.... .......
T Consensus 28 i~s~sRd~t~~vw~~~~~---~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~-------~~P~~~L 97 (745)
T KOG0301|consen 28 IISGSRDGTVKVWAKKGK---QYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQ-------AEPLYTL 97 (745)
T ss_pred EeecCCCCceeeeeccCc---ccccceecccCcceeeccceeccccCcceEeecccceEEEEecCC-------CCchhhh
Confidence 568889999999985332 22344557788888877 88885 445799999999999999875 2233456
Q ss_pred ecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCC
Q 001366 825 MSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEK 904 (1092)
Q Consensus 825 ~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~ 904 (1092)
.+|.+.|.|++...+ +. ++|||+|.|+++|-. +++...+.+|+..||++.+-| .. .++|||.|.+|++|.- +
T Consensus 98 kgH~snVC~ls~~~~-~~-~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~-e~-~~vTgsaDKtIklWk~--~ 169 (745)
T KOG0301|consen 98 KGHKSNVCSLSIGED-GT-LISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLP-EN-TYVTGSADKTIKLWKG--G 169 (745)
T ss_pred hccccceeeeecCCc-Cc-eEecccccceEEecc--hhhhcccCCcchheeeeeecC-CC-cEEeccCcceeeeccC--C
Confidence 789999999997765 44 999999999999964 677777999999999999998 44 8999999999999986 6
Q ss_pred ceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEE
Q 001366 905 NSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKL 982 (1092)
Q Consensus 905 ~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~v 982 (1092)
+++.+|. |..-|..+++-+++ .|++++.||.|++||+. +. .+..+.+|+..|.+++.. +++.++|++.|++++|
T Consensus 170 ~~l~tf~gHtD~VRgL~vl~~~--~flScsNDg~Ir~w~~~-ge-~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlri 245 (745)
T KOG0301|consen 170 TLLKTFSGHTDCVRGLAVLDDS--HFLSCSNDGSIRLWDLD-GE-VLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRI 245 (745)
T ss_pred chhhhhccchhheeeeEEecCC--CeEeecCCceEEEEecc-Cc-eeeeeeccceEEEEEEecCCCCeEEEecCCceEEE
Confidence 7888888 66789999999986 48899999999999994 43 466778999999999954 8899999999999999
Q ss_pred EEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCC
Q 001366 983 WDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRS 1036 (1092)
Q Consensus 983 WDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~ 1036 (1092)
|+.. .|.+.+.-.+..|+++.+-++|+ |++|+.||.||||...
T Consensus 246 W~~~----------e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 246 WKKD----------ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVD 288 (745)
T ss_pred eecC----------ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEEEec
Confidence 9976 56777776667899999988886 6678889999999755
No 493
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.89 E-value=2.4e-22 Score=221.37 Aligned_cols=286 Identities=12% Similarity=0.186 Sum_probs=234.6
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001366 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1092)
Q Consensus 775 l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~ 854 (1092)
...|...|+.+.++...+++.||| .|.|+|||+.....+....+. ........|.++...|+ ++.|++|+.-.++.
T Consensus 415 tL~HGEvVcAvtIS~~trhVyTgG-kgcVKVWdis~pg~k~PvsqL--dcl~rdnyiRSckL~pd-grtLivGGeastls 490 (705)
T KOG0639|consen 415 TLAHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISQPGNKSPVSQL--DCLNRDNYIRSCKLLPD-GRTLIVGGEASTLS 490 (705)
T ss_pred hhccCcEEEEEEecCCcceeEecC-CCeEEEeeccCCCCCCccccc--cccCcccceeeeEecCC-CceEEeccccceee
Confidence 347999999999999999999997 578999999864322211111 12234677889999998 88899999999999
Q ss_pred EEECCCCce--EEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEE
Q 001366 855 LWDACTGQT--VSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAF 931 (1092)
Q Consensus 855 IWD~~tg~~--i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~lat 931 (1092)
|||+..-.. -..+....-.+..++.+| |.++.++|..||.|.|||+.....++.|+ |...+.||.++++|. .|.|
T Consensus 491 iWDLAapTprikaeltssapaCyALa~sp-DakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGt-klWT 568 (705)
T KOG0639|consen 491 IWDLAAPTPRIKAELTSSAPACYALAISP-DAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGT-KLWT 568 (705)
T ss_pred eeeccCCCcchhhhcCCcchhhhhhhcCC-ccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCc-eeec
Confidence 999976542 223443345678899999 88999999999999999999999999998 678899999999995 8999
Q ss_pred EECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeE
Q 001366 932 GSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKN 1010 (1092)
Q Consensus 932 gs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~ 1010 (1092)
|+-|++|+.||+|.++.+.. ....+.|.++.++ .+++|+.|-..+.+-|-...+ ...+.+.-|...|.
T Consensus 569 GGlDntvRcWDlregrqlqq--hdF~SQIfSLg~cP~~dWlavGMens~vevlh~sk---------p~kyqlhlheScVL 637 (705)
T KOG0639|consen 569 GGLDNTVRCWDLREGRQLQQ--HDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSK---------PEKYQLHLHESCVL 637 (705)
T ss_pred CCCccceeehhhhhhhhhhh--hhhhhhheecccCCCccceeeecccCcEEEEecCC---------ccceeecccccEEE
Confidence 99999999999998765321 1225678888888 677999999999998888763 33567788999999
Q ss_pred EEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1011 FVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1011 ~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
++.|++.|+++++.+.|+.+..|..-.|..|...+- ...|.++.++-|.++++||+.|....||+
T Consensus 638 SlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE---------------~SsVlsCDIS~ddkyIVTGSGdkkATVYe 702 (705)
T KOG0639|consen 638 SLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE---------------SSSVLSCDISFDDKYIVTGSGDKKATVYE 702 (705)
T ss_pred EEEecccCceeeecCchhhhhhccCccccceeeccc---------------cCcceeeeeccCceEEEecCCCcceEEEE
Confidence 999999999999999999999998888877765541 46799999999999999999999999998
Q ss_pred cC
Q 001366 1091 MV 1092 (1092)
Q Consensus 1091 lv 1092 (1092)
++
T Consensus 703 V~ 704 (705)
T KOG0639|consen 703 VI 704 (705)
T ss_pred Ee
Confidence 75
No 494
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.89 E-value=2.4e-23 Score=216.03 Aligned_cols=160 Identities=21% Similarity=0.226 Sum_probs=124.0
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCch
Q 001366 313 VNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSEN 392 (1092)
Q Consensus 313 gsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d 392 (1092)
|||.++|+..+..+++.+++.|++||+.||.|||++| ||+|||++.++.+|+ ||+++....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~----------- 61 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP----------- 61 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc-----------
Confidence 7899999877777899999999999999999999999 999999999999999 998765330
Q ss_pred hhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccC
Q 001366 393 YRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSK 472 (1092)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 472 (1092)
T Consensus 62 -------------------------------------------------------------------------------- 61 (176)
T smart00750 62 -------------------------------------------------------------------------------- 61 (176)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHHHHHHhccccCCCC
Q 001366 473 SSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPP 549 (1092)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~~~~~~~~~~~~p~ 549 (1092)
....||+.|||||++.+..++.++|||||||++|||+++ |............+.....+.
T Consensus 62 -----------------~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 124 (176)
T smart00750 62 -----------------EQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPAD 124 (176)
T ss_pred -----------------ccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccC
Confidence 012478899999999999999999999999999999986 332222222222222111111
Q ss_pred ------CCCCCCh--hHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 550 ------SFLSENP--KEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 550 ------~~~~~~~--~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
....... .+.+|+.+||..+|.+||++.++++|+|+...
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 125 DPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred CccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 1111122 58899999999999999999999999998653
No 495
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.89 E-value=1.6e-21 Score=222.92 Aligned_cols=341 Identities=14% Similarity=0.180 Sum_probs=252.9
Q ss_pred hhhccchhhhhhccccccCCCCcE--EeEcCCeEEEEEcccce---------------------EEeeEE-----eeeec
Q 001366 725 LLRDRENLFLAQQDQEIQNPTDRL--GAFFDGLCKYARYSKFE---------------------VQGMLR-----TGEFN 776 (1092)
Q Consensus 725 ~l~~~~~~~~~~~~~~~~~~~~~l--~~~~D~~~k~w~~~~~~---------------------~~~~l~-----~~~l~ 776 (1092)
.+++|.+++-.+.+.... .++.+ +++.|.++++|++.-.. ....+. ...+.
T Consensus 186 el~GH~DWIrsl~f~~~~-~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~ 264 (764)
T KOG1063|consen 186 ELEGHTDWIRSLAFARLG-GDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLM 264 (764)
T ss_pred EeeccchhhhhhhhhccC-CCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhc
Confidence 378999999887764322 23333 67799999999974332 010111 02245
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCccccccee---ee-cCCCCeEEEEEecCCCCEEEEEECCCc
Q 001366 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAV---EM-SNRSKLSCVCWNNYIKNYLASADYDGV 852 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~---~~-~h~~~V~~v~~sp~~~~~LaSgs~Dgt 852 (1092)
+|.+.|.++.|+|.+..|++++.|+++.||...... ....... .+ +......+.-|+|+ ++.+++-++-|-
T Consensus 265 GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~t----GiWv~~vRlGe~gg~a~GF~g~lw~~n-~~~ii~~g~~Gg 339 (764)
T KOG1063|consen 265 GHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENT----GIWVDVVRLGEVGGSAGGFWGGLWSPN-SNVIIAHGRTGG 339 (764)
T ss_pred CcccceEEEEEccchhhheecccCcceEEEecCCcc----ceEEEEEEeecccccccceeeEEEcCC-CCEEEEecccCc
Confidence 999999999999999999999999999999876421 0111111 12 23456889999998 889999999999
Q ss_pred EEEEECCC-C--ceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCC-CceeeeEe----cCCceEEEEEccC
Q 001366 853 VKLWDACT-G--QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE-KNSLATIK----NIANVCCVQFSAH 924 (1092)
Q Consensus 853 V~IWD~~t-g--~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~-~~~l~~l~----~~~~V~sl~fsp~ 924 (1092)
.++|.... . .......||.+.|.+|+|.| .|.+|+|.|.|.+-|+|---. ....+.+. |...++|++|-+.
T Consensus 340 ~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~p-sGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~ 418 (764)
T KOG1063|consen 340 FHLWKTKDKTFWTQEPVISGHVDGVKDVDWDP-SGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNE 418 (764)
T ss_pred EEEEeccCccceeeccccccccccceeeeecC-CCCEEEEeccccceeeecccccccceeeecccccccccceeeehccC
Confidence 99998322 2 23334569999999999999 899999999999999987651 12233332 6678999999885
Q ss_pred CCeEEEEEECCCeEEEEEcCCC--------------------------------C-----------c-------------
Q 001366 925 SSHLLAFGSADYRTYCYDLRNA--------------------------------R-----------A------------- 948 (1092)
Q Consensus 925 ~~~~latgs~Dg~I~vwDlr~~--------------------------------~-----------~------------- 948 (1092)
. ..|++|.....+++|+.... + .
T Consensus 419 ~-~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p 497 (764)
T KOG1063|consen 419 D-LQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAP 497 (764)
T ss_pred C-ceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCc
Confidence 3 47888988999999885210 0 0
Q ss_pred -------------------ceEEecCCCCCeEEEEEc-CCCEEEEEECC-----CeEEEEEcCCCCCCCCCCCceeEEEc
Q 001366 949 -------------------PWCVLAGHEKAVSYVKFL-DSGTLVTASTD-----NKLKLWDLKRTSHTGPSTNACSLTFS 1003 (1092)
Q Consensus 949 -------------------~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~D-----g~I~vWDl~~~~~~~~~~~~~~~~l~ 1003 (1092)
.+..+-||...|++++.+ +++.++|++.. ..|++|+..++ ...+.+.
T Consensus 498 ~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W--------~~~~~L~ 569 (764)
T KOG1063|consen 498 CELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANW--------LQVQELE 569 (764)
T ss_pred hhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccch--------hhhheec
Confidence 012245788889999998 56678887754 35999999843 4456889
Q ss_pred CCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecC
Q 001366 1004 GHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSS 1083 (1092)
Q Consensus 1004 ~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~D 1083 (1092)
+|.-.|+.++|||||+||++.|.|.++.+|...... ...++| .....|..-|+++.|+|++.++||||.|
T Consensus 570 ~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~-~~e~~f---------a~~k~HtRIIWdcsW~pde~~FaTaSRD 639 (764)
T KOG1063|consen 570 GHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDI-KDEFRF---------ACLKAHTRIIWDCSWSPDEKYFATASRD 639 (764)
T ss_pred ccceEEEEEEECCCCcEEEEeecCceEEeeeeeccc-chhhhh---------ccccccceEEEEcccCcccceeEEecCC
Confidence 999999999999999999999999999999864322 112222 1246889999999999999999999999
Q ss_pred CeEEEEEc
Q 001366 1084 GCIKVLQM 1091 (1092)
Q Consensus 1084 G~V~vW~l 1091 (1092)
.+|+||.+
T Consensus 640 K~VkVW~~ 647 (764)
T KOG1063|consen 640 KKVKVWEE 647 (764)
T ss_pred ceEEEEec
Confidence 99999975
No 496
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.89 E-value=7e-22 Score=207.21 Aligned_cols=251 Identities=21% Similarity=0.265 Sum_probs=191.4
Q ss_pred CCCCeEEEEEecCCCCEEEEEECCCcEEEEECCC-CceE-EEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCC
Q 001366 827 NRSKLSCVCWNNYIKNYLASADYDGVVKLWDACT-GQTV-SHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEK 904 (1092)
Q Consensus 827 h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~t-g~~i-~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~ 904 (1092)
....|.+++|+|....+++++|+||+||+|++.. |..+ +....|.++|.+++|+. ++..+++|+.|+.+++||+.++
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsd-dgskVf~g~~Dk~~k~wDL~S~ 104 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSD-DGSKVFSGGCDKQAKLWDLASG 104 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEcc-CCceEEeeccCCceEEEEccCC
Confidence 4678999999997688888999999999999976 4433 33457999999999998 8999999999999999999999
Q ss_pred ceeeeEecCCceEEEEEccCCC-eEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEE
Q 001366 905 NSLATIKNIANVCCVQFSAHSS-HLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLW 983 (1092)
Q Consensus 905 ~~l~~l~~~~~V~sl~fsp~~~-~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vW 983 (1092)
+....-.|.++|.++.|-+... ..|+||+.|++|+.||+|... ++.++.- ...|.++..- ...++.+..+..|.+|
T Consensus 105 Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~-pv~t~~L-PeRvYa~Dv~-~pm~vVata~r~i~vy 181 (347)
T KOG0647|consen 105 QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSN-PVATLQL-PERVYAADVL-YPMAVVATAERHIAVY 181 (347)
T ss_pred CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCC-eeeeeec-cceeeehhcc-CceeEEEecCCcEEEE
Confidence 7776667999999999987542 378999999999999999765 4454432 3345655442 3467788889999999
Q ss_pred EcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCC
Q 001366 984 DLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGL 1063 (1092)
Q Consensus 984 Dl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~ 1063 (1092)
++++..... ...-..-.-.+++|++..+....|.||-.|.+.|.++..+.+...+.|.+-..... ..+.--
T Consensus 182 nL~n~~te~------k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~---~~~~VY 252 (347)
T KOG0647|consen 182 NLENPPTEF------KRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNS---VNDDVY 252 (347)
T ss_pred EcCCCcchh------hhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCC---CCCceE
Confidence 997532111 01111123357899999998878999999999999999886555444432110000 111134
Q ss_pred CEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1064 FVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1064 ~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
.|++|+|+|.-..|+|+|+||++.+||
T Consensus 253 aVNsi~FhP~hgtlvTaGsDGtf~FWD 279 (347)
T KOG0647|consen 253 AVNSIAFHPVHGTLVTAGSDGTFSFWD 279 (347)
T ss_pred EecceEeecccceEEEecCCceEEEec
Confidence 699999999999999999999999998
No 497
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.89 E-value=1.5e-22 Score=222.83 Aligned_cols=275 Identities=20% Similarity=0.233 Sum_probs=220.9
Q ss_pred cCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccc
Q 001366 742 QNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYP 821 (1092)
Q Consensus 742 ~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~ 821 (1092)
.++...+-..--|-||+|++..-....-...-+.....+.|+++.+.|||+.|++||.-.++.|||+..... .+....
T Consensus 428 S~~trhVyTgGkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTp-rikael- 505 (705)
T KOG0639|consen 428 SNPTRHVYTGGKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTP-RIKAEL- 505 (705)
T ss_pred cCCcceeEecCCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCc-chhhhc-
Confidence 344444433345679999986542222222223345678899999999999999999999999999975211 111111
Q ss_pred eeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEec
Q 001366 822 AVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNI 901 (1092)
Q Consensus 822 ~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl 901 (1092)
....-...+++.+|| .+...+|..||.|.|||+.....++.|.+|++.+.||+.++ +|..|.||+-|++|+.||+
T Consensus 506 ---tssapaCyALa~spD-akvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~-dGtklWTGGlDntvRcWDl 580 (705)
T KOG0639|consen 506 ---TSSAPACYALAISPD-AKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISK-DGTKLWTGGLDNTVRCWDL 580 (705)
T ss_pred ---CCcchhhhhhhcCCc-cceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecC-CCceeecCCCccceeehhh
Confidence 111234567788998 78888899999999999999999999999999999999999 9999999999999999999
Q ss_pred CCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeE
Q 001366 902 NEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKL 980 (1092)
Q Consensus 902 ~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I 980 (1092)
++++.+....-.+.|.++..+|++. ++++|..++.+.|....... ...+.-|.+-|.+++|. -++++++.+.|+.+
T Consensus 581 regrqlqqhdF~SQIfSLg~cP~~d-WlavGMens~vevlh~skp~--kyqlhlheScVLSlKFa~cGkwfvStGkDnlL 657 (705)
T KOG0639|consen 581 REGRQLQQHDFSSQIFSLGYCPTGD-WLAVGMENSNVEVLHTSKPE--KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLL 657 (705)
T ss_pred hhhhhhhhhhhhhhheecccCCCcc-ceeeecccCcEEEEecCCcc--ceeecccccEEEEEEecccCceeeecCchhhh
Confidence 9999888877788999999999996 99999999999888877654 36777899999999998 78899999999999
Q ss_pred EEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeC
Q 001366 981 KLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHR 1035 (1092)
Q Consensus 981 ~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~ 1035 (1092)
..|.+. -+..+...+ ....|.++.+|.|++||++||.|....||.+
T Consensus 658 nawrtP--------yGasiFqsk-E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 658 NAWRTP--------YGASIFQSK-ESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred hhccCc--------cccceeecc-ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 999987 333344443 4567999999999999999999999988864
No 498
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.89 E-value=4.7e-22 Score=225.47 Aligned_cols=285 Identities=21% Similarity=0.285 Sum_probs=207.6
Q ss_pred EEEEcCC---CCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCC
Q 001366 784 SISFDRD---EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACT 860 (1092)
Q Consensus 784 sl~fspd---g~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~t 860 (1092)
++.|++- ...||.+..||.|.+||.....-. .........+.|...|..+.|-| +...|++++.|.++++||+.+
T Consensus 54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr-~ee~~lk~~~aH~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk~ 131 (720)
T KOG0321|consen 54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFR-LEERQLKKPLAHKNAIFDLKWAP-GESLLVSASGDSTIRPWDVKT 131 (720)
T ss_pred cccccCCCCccceEEEecCCCceeeecchhhhcc-hhhhhhcccccccceeEeeccCC-CceeEEEccCCceeeeeeecc
Confidence 3566642 448999999999999998752211 11111234457999999999999 488999999999999999999
Q ss_pred CceEEE--eeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCc--------------------eeeeE-------e
Q 001366 861 GQTVSH--YIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN--------------------SLATI-------K 911 (1092)
Q Consensus 861 g~~i~~--l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~--------------------~l~~l-------~ 911 (1092)
+.++.. +.+|...|.+++|.|.++..|++|+.||.|.|||++-.. ....+ .
T Consensus 132 s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~k 211 (720)
T KOG0321|consen 132 SRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWK 211 (720)
T ss_pred ceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccc
Confidence 988776 889999999999999999999999999999999997432 00000 0
Q ss_pred -cCCc----eEEEEEccCCCeEEEEEEC-CCeEEEEEcCCCCcce-------EEecCC---CCCeEEEEEc-CCCEEEEE
Q 001366 912 -NIAN----VCCVQFSAHSSHLLAFGSA-DYRTYCYDLRNARAPW-------CVLAGH---EKAVSYVKFL-DSGTLVTA 974 (1092)
Q Consensus 912 -~~~~----V~sl~fsp~~~~~latgs~-Dg~I~vwDlr~~~~~~-------~~l~~H---~~~V~~v~fs-~~~~L~Sg 974 (1092)
+... |+.+.| .|.. .||+++. |+.|+|||+|...... ..+.-| ...+.++... .|.+|++.
T Consensus 212 A~s~ti~ssvTvv~f-kDe~-tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~As 289 (720)
T KOG0321|consen 212 AASNTIFSSVTVVLF-KDES-TLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFAS 289 (720)
T ss_pred cccCceeeeeEEEEE-eccc-eeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEE
Confidence 1112 444444 4553 6777666 9999999999764321 112223 2234444443 56788888
Q ss_pred ECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEE--EEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCC
Q 001366 975 STDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFV--GLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPI 1052 (1092)
Q Consensus 975 s~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v--~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i 1052 (1092)
+.|+.|.+|++.... ..++..+.++.+.-..+ ..+|++.+|++|+.|...+||.++..+.-.
T Consensus 290 CtD~sIy~ynm~s~s------~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~---------- 353 (720)
T KOG0321|consen 290 CTDNSIYFYNMRSLS------ISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPP---------- 353 (720)
T ss_pred ecCCcEEEEeccccC------cCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCCh----------
Confidence 889999999998643 23455566655543333 578999999999999999999987655322
Q ss_pred CCccccCCCCCCEEEEEEeCC-CCEEEEEecCCeEEEEEc
Q 001366 1053 SGKETDDDNGLFVSSVCWRRR-SDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1053 ~~~~~~~~h~~~V~sva~spd-~~~Lasgs~DG~V~vW~l 1091 (1092)
....+|...|.+|+|.|. -.-+||++.|-.++||++
T Consensus 354 ---~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l 390 (720)
T KOG0321|consen 354 ---ALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRL 390 (720)
T ss_pred ---hhhhCcceEEEEEeeccccCCCceeeccCcceEEEec
Confidence 234678889999999984 344677799999999997
No 499
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=1.1e-23 Score=238.67 Aligned_cols=247 Identities=14% Similarity=0.070 Sum_probs=157.6
Q ss_pred hhccCCCCCCCccccceecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Q 001366 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDY 344 (1092)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~ 344 (1092)
+|+....+=+++++-....+.++| .+|+|..||++..+|-+.| .+++..++.|+..+.+||++
T Consensus 682 ILAEADn~WVVrLyySFQDkdnLY----------------FVMdYIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAies 744 (1034)
T KOG0608|consen 682 ILAEADNEWVVRLYYSFQDKDNLY----------------FVMDYIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIES 744 (1034)
T ss_pred hHhhcCCcceEEEEEEeccCCceE----------------EEEeccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHH
Confidence 344445555555555444444444 3899999999999997766 46777999999999999999
Q ss_pred hhhcCccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccc
Q 001366 345 HHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFS 424 (1092)
Q Consensus 345 lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (1092)
.|.+|+|||||||+||||+.+|+|||+||||+.-+.-.-. +|-+ | .+++-
T Consensus 745 VHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd-----------skYY---------------q-~gdH~--- 794 (1034)
T KOG0608|consen 745 VHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD-----------SKYY---------------Q-EGDHH--- 794 (1034)
T ss_pred HHhccceecccCccceEEccCCceeeeeccccccceeccc-----------cccc---------------c-CCCcc---
Confidence 9999999999999999999999999999999865431100 0000 0 00000
Q ss_pred cccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCccccc--ccccccccccccccccccCcc
Q 001366 425 RWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNT--AQQQSTSVSEQLEEKWYASPE 502 (1092)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gt~~Y~aPE 502 (1092)
++-++-.+ .+ +.+...+.. .+... .+-+..-..+.+||+-|+|||
T Consensus 795 RqDSmep~--------------~e----~~d~~~~lk---------------vL~~ra~~~h~r~~ahslvgt~nyiape 841 (1034)
T KOG0608|consen 795 RQDSMEPS--------------PE----WADISKCLK---------------VLERRAMRQHQRILAHSLVGTPNYIAPE 841 (1034)
T ss_pred ccccCCCc--------------hh----hccccccch---------------HHHHHHHhhhhhhhhhhhcCCCcccChH
Confidence 00000000 00 000000000 00000 000111123689999999999
Q ss_pred cccCCCCCccccchhhhHHHHHHcCC---CCcHHHHHHHHHhccccC--CCCCCCCCChhHHHHHHhccccCCCCCC---
Q 001366 503 ELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRI--LPPSFLSENPKEAGFCLWQLHPEPLSRP--- 574 (1092)
Q Consensus 503 ~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~~~~~~~~~~~--~p~~~~~~~~~~~~li~~lL~~dP~~Rp--- 574 (1092)
+|....|+..+|+||.|||||||+.| |-........++.+.-+. -.+.-...++++.+||.+|. -++++|.
T Consensus 842 vl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkn 920 (1034)
T KOG0608|consen 842 VLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKN 920 (1034)
T ss_pred HhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhccc
Confidence 99999999999999999999999975 433333222232222211 11223355788889998876 4788885
Q ss_pred CHHHHhhhhhhhhhhccc
Q 001366 575 TTREILQSEVTNEFQEVC 592 (1092)
Q Consensus 575 sa~eiL~~~~~~~~~~~~ 592 (1092)
.+.++..||||.......
T Consensus 921 g~d~vKaHpfFkgIDfss 938 (1034)
T KOG0608|consen 921 GADQVKAHPFFKGIDFSS 938 (1034)
T ss_pred chhhhhcCccccccchHh
Confidence 457799999999875443
No 500
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.89 E-value=8.3e-21 Score=217.26 Aligned_cols=283 Identities=15% Similarity=0.210 Sum_probs=231.0
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEE
Q 001366 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLW 856 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IW 856 (1092)
-....|.++||+.+.+.||.+-.||.|.||++... -...+...-+....|.+++|.+ +..|.|.+.+|+|.-|
T Consensus 23 ~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~-----w~~~~vi~g~~drsIE~L~W~e--~~RLFS~g~sg~i~Ew 95 (691)
T KOG2048|consen 23 YKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNN-----WFLEPVIHGPEDRSIESLAWAE--GGRLFSSGLSGSITEW 95 (691)
T ss_pred eeccceEEEEEeccCCceeeeccCCcEEEEccCCC-----ceeeEEEecCCCCceeeEEEcc--CCeEEeecCCceEEEE
Confidence 34678999999999999999999999999998751 1122233334577899999996 6789999999999999
Q ss_pred ECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe---cCCceEEEEEccCCCeEEEEEE
Q 001366 857 DACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK---NIANVCCVQFSAHSSHLLAFGS 933 (1092)
Q Consensus 857 D~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~---~~~~V~sl~fsp~~~~~latgs 933 (1092)
|+.+++....+..-.+.||+++.+| .++.++.|++||.+..+++..++...... ..+.|.+++|+|++. .+++|+
T Consensus 96 Dl~~lk~~~~~d~~gg~IWsiai~p-~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~-~i~~Gs 173 (691)
T KOG2048|consen 96 DLHTLKQKYNIDSNGGAIWSIAINP-ENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGT-KIAGGS 173 (691)
T ss_pred ecccCceeEEecCCCcceeEEEeCC-ccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCcc-EEEecc
Confidence 9999999999998899999999999 78899999999988888888776554332 358899999999994 799999
Q ss_pred CCCeEEEEEcCCCCcceE------Eec-CCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCC
Q 001366 934 ADYRTYCYDLRNARAPWC------VLA-GHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHT 1006 (1092)
Q Consensus 934 ~Dg~I~vwDlr~~~~~~~------~l~-~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~ 1006 (1092)
.||.|++||..++..... .+. +...-|++|.|..++.|++|.+-|+|++||-. .+..+..+..|.
T Consensus 174 ~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~--------~gTLiqS~~~h~ 245 (691)
T KOG2048|consen 174 IDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSI--------FGTLIQSHSCHD 245 (691)
T ss_pred cCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCceEEEEccc--------Ccchhhhhhhhh
Confidence 999999999998765331 111 13346788888888899999999999999988 466788888999
Q ss_pred CCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeE
Q 001366 1007 NEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCI 1086 (1092)
Q Consensus 1007 ~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V 1086 (1092)
..|.+++.++++.++++++.|+.|.-|.......-. +.+ .....|...|.++|..++ .|++||.|+.+
T Consensus 246 adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~w-v~~---------~~r~~h~hdvrs~av~~~--~l~sgG~d~~l 313 (691)
T KOG2048|consen 246 ADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEW-VIN---------SRRDLHAHDVRSMAVIEN--ALISGGRDFTL 313 (691)
T ss_pred cceeEEEEcCCCCeEEEccCCCceEEEEecCCccce-eee---------ccccCCcccceeeeeecc--eEEecceeeEE
Confidence 999999999999999999999999999766554311 111 122567778999998887 89999999987
Q ss_pred EE
Q 001366 1087 KV 1088 (1092)
Q Consensus 1087 ~v 1088 (1092)
.+
T Consensus 314 ~i 315 (691)
T KOG2048|consen 314 AI 315 (691)
T ss_pred EE
Confidence 65
Done!