Query 001366
Match_columns 1092
No_of_seqs 872 out of 5507
Neff 7.8
Searched_HMMs 29240
Date Tue Mar 26 00:28:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001366.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001366hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.5E-40 5E-45 390.7 42.3 284 775-1091 104-409 (410)
2 4g31_A Eukaryotic translation 100.0 2.4E-43 8.2E-48 396.0 12.3 270 220-588 15-286 (299)
3 4fih_A Serine/threonine-protei 100.0 6.2E-43 2.1E-47 397.6 14.2 246 218-590 82-332 (346)
4 4b9d_A Serine/threonine-protei 100.0 5.8E-43 2E-47 398.4 12.2 251 214-588 26-283 (350)
5 3ow8_A WD repeat-containing pr 100.0 3.9E-39 1.3E-43 366.0 42.5 287 774-1091 27-319 (321)
6 4fie_A Serine/threonine-protei 100.0 4.9E-42 1.7E-46 399.6 15.4 247 218-590 159-409 (423)
7 2ynn_A Coatomer subunit beta'; 100.0 1.5E-38 5.2E-43 357.5 42.9 286 774-1091 8-300 (304)
8 3fpq_A Serine/threonine-protei 100.0 3.1E-42 1E-46 384.1 12.5 251 214-587 30-288 (290)
9 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.1E-42 7.1E-47 387.7 10.8 252 213-588 33-297 (311)
10 3ubd_A Ribosomal protein S6 ki 100.0 3.1E-42 1.1E-46 386.1 9.3 254 212-588 24-288 (304)
11 1got_B GT-beta; complex (GTP-b 100.0 6.1E-38 2.1E-42 358.4 44.9 283 774-1090 50-340 (340)
12 4gqb_B Methylosome protein 50; 100.0 8.2E-39 2.8E-43 367.3 37.7 288 776-1091 27-329 (344)
13 3iz6_a 40S ribosomal protein R 100.0 3.1E-39 1.1E-43 375.2 33.3 292 774-1091 61-373 (380)
14 1nr0_A Actin interacting prote 100.0 4.8E-38 1.6E-42 388.7 42.7 334 725-1091 142-609 (611)
15 4g56_B MGC81050 protein; prote 100.0 2.2E-38 7.4E-43 365.3 36.7 287 776-1091 39-341 (357)
16 3hyh_A Carbon catabolite-derep 100.0 3.9E-41 1.3E-45 372.1 13.0 246 214-587 15-268 (275)
17 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.5E-37 5E-42 356.2 41.9 306 774-1091 10-333 (345)
18 4g3f_A NF-kappa-beta-inducing 100.0 1.2E-41 4E-46 386.0 7.3 248 218-590 66-331 (336)
19 3frx_A Guanine nucleotide-bind 100.0 3.2E-37 1.1E-41 349.3 43.7 297 773-1091 11-315 (319)
20 2pbi_B Guanine nucleotide-bind 100.0 3.1E-37 1.1E-41 355.1 43.1 285 774-1090 59-354 (354)
21 2xzm_R RACK1; ribosome, transl 100.0 8.2E-37 2.8E-41 349.3 45.9 305 773-1091 15-338 (343)
22 4ery_A WD repeat-containing pr 100.0 8.9E-37 3.1E-41 342.9 42.7 286 774-1091 18-310 (312)
23 1erj_A Transcriptional repress 100.0 8.6E-37 3E-41 356.2 42.1 297 777-1091 62-387 (393)
24 3omv_A RAF proto-oncogene seri 100.0 1.1E-39 3.8E-44 366.1 15.0 240 219-583 45-295 (307)
25 2hes_X YDR267CP; beta-propelle 100.0 7.9E-37 2.7E-41 347.9 38.6 296 774-1091 9-326 (330)
26 4b99_A Mitogen-activated prote 100.0 2E-39 6.9E-44 377.9 15.7 264 214-592 56-355 (398)
27 1nr0_A Actin interacting prote 100.0 1.4E-36 4.9E-41 375.5 42.1 336 724-1091 53-520 (611)
28 1vyh_C Platelet-activating fac 100.0 2.3E-36 7.7E-41 355.0 37.6 286 723-1035 101-409 (410)
29 1got_B GT-beta; complex (GTP-b 100.0 2.6E-35 8.8E-40 336.6 44.3 287 723-1034 48-340 (340)
30 2ymu_A WD-40 repeat protein; u 100.0 1.8E-35 6.1E-40 360.6 45.5 299 747-1090 277-577 (577)
31 4f9c_A Cell division cycle 7-r 100.0 8.1E-39 2.8E-43 368.7 14.3 276 214-588 23-359 (361)
32 4gt4_A Tyrosine-protein kinase 100.0 1.9E-38 6.5E-43 357.3 15.5 247 218-582 34-300 (308)
33 4aow_A Guanine nucleotide-bind 100.0 1E-34 3.4E-39 328.0 45.4 299 773-1091 32-335 (340)
34 3ow8_A WD repeat-containing pr 100.0 2.9E-35 9.8E-40 334.1 39.9 288 726-1035 28-319 (321)
35 4asz_A BDNF/NT-3 growth factor 100.0 2.2E-38 7.6E-43 355.2 12.3 254 214-588 15-287 (299)
36 4aoj_A High affinity nerve gro 100.0 6.3E-38 2.1E-42 356.3 15.8 245 219-582 50-313 (329)
37 2pm9_A Protein WEB1, protein t 100.0 2E-36 6.9E-41 352.3 27.9 327 751-1092 42-413 (416)
38 1r5m_A SIR4-interacting protei 100.0 1.6E-34 5.4E-39 335.7 42.0 328 742-1091 53-423 (425)
39 3zwl_B Eukaryotic translation 100.0 3.7E-34 1.3E-38 326.0 43.9 284 774-1091 27-344 (369)
40 3iz6_a 40S ribosomal protein R 100.0 3.4E-35 1.2E-39 341.1 34.6 298 723-1039 59-377 (380)
41 4ase_A Vascular endothelial gr 100.0 5.2E-38 1.8E-42 360.0 10.3 253 213-582 65-341 (353)
42 4gqb_B Methylosome protein 50; 100.0 5.4E-35 1.9E-39 335.5 35.4 282 742-1038 38-332 (344)
43 2pbi_B Guanine nucleotide-bind 100.0 4.6E-34 1.6E-38 328.6 43.1 291 723-1034 57-354 (354)
44 3k26_A Polycomb protein EED; W 100.0 1.5E-34 5.2E-39 329.2 38.4 304 775-1092 14-365 (366)
45 3uto_A Twitchin; kinase, muscl 100.0 1.1E-37 3.9E-42 380.3 12.9 254 213-591 158-420 (573)
46 3dm0_A Maltose-binding peripla 100.0 2.5E-34 8.4E-39 360.6 42.7 303 774-1091 377-691 (694)
47 3v5w_A G-protein coupled recep 100.0 1.4E-37 4.7E-42 377.6 12.5 248 214-588 191-456 (689)
48 2ymu_A WD-40 repeat protein; u 100.0 8.9E-34 3.1E-38 345.6 46.0 300 747-1091 236-537 (577)
49 1gxr_A ESG1, transducin-like e 100.0 1.5E-33 5.1E-38 317.2 43.6 285 776-1092 48-336 (337)
50 2ynn_A Coatomer subunit beta'; 100.0 7.5E-34 2.6E-38 319.3 38.7 244 823-1091 8-257 (304)
51 1sq9_A Antiviral protein SKI8; 100.0 6.5E-34 2.2E-38 329.3 38.9 303 774-1091 11-393 (397)
52 4g56_B MGC81050 protein; prote 100.0 1.9E-34 6.5E-39 332.3 34.1 291 728-1038 40-344 (357)
53 3vl1_A 26S proteasome regulato 100.0 4.1E-34 1.4E-38 334.0 36.6 317 746-1091 70-417 (420)
54 1k8k_C P40, ARP2/3 complex 41 100.0 2E-33 6.9E-38 321.4 39.8 299 776-1091 5-359 (372)
55 2hes_X YDR267CP; beta-propelle 100.0 7.1E-34 2.4E-38 323.5 35.7 298 725-1037 9-328 (330)
56 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.3E-33 1.1E-37 320.1 40.5 304 725-1042 10-340 (345)
57 3ei3_B DNA damage-binding prot 100.0 2.1E-33 7.1E-38 324.7 39.2 285 775-1091 69-380 (383)
58 3i2n_A WD repeat-containing pr 100.0 6.6E-34 2.3E-38 323.1 33.1 304 775-1091 14-351 (357)
59 3odt_A Protein DOA1; ubiquitin 100.0 9E-33 3.1E-37 307.7 40.8 277 774-1091 13-294 (313)
60 3frx_A Guanine nucleotide-bind 100.0 3.9E-33 1.4E-37 315.8 37.8 293 724-1037 11-317 (319)
61 4e54_B DNA damage-binding prot 100.0 5.1E-34 1.7E-38 337.3 31.2 287 776-1091 116-428 (435)
62 1r5m_A SIR4-interacting protei 100.0 6.8E-33 2.3E-37 321.9 38.6 286 777-1091 43-359 (425)
63 3dwl_C Actin-related protein 2 100.0 1.7E-34 5.9E-39 332.4 24.9 301 777-1091 9-377 (377)
64 3hmm_A TGF-beta receptor type- 100.0 5.7E-36 2E-40 337.2 10.8 243 219-582 12-291 (303)
65 4h5i_A Guanine nucleotide-exch 100.0 4.4E-33 1.5E-37 322.0 34.4 290 779-1091 14-341 (365)
66 3gre_A Serine/threonine-protei 100.0 2.3E-33 7.8E-38 330.3 31.1 300 776-1090 60-437 (437)
67 4ery_A WD repeat-containing pr 100.0 2.5E-32 8.5E-37 306.7 38.0 285 724-1036 17-311 (312)
68 2pm9_A Protein WEB1, protein t 100.0 1.4E-33 4.7E-38 328.3 28.3 283 781-1091 14-335 (416)
69 2pm7_B Protein transport prote 100.0 1.8E-32 6E-37 307.0 36.0 253 824-1091 5-283 (297)
70 2xzm_R RACK1; ribosome, transl 100.0 2.1E-32 7.2E-37 312.7 36.8 296 723-1037 14-340 (343)
71 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-33 4.6E-38 341.6 27.8 312 748-1091 177-515 (524)
72 1erj_A Transcriptional repress 100.0 5.3E-32 1.8E-36 315.7 40.3 288 728-1037 62-389 (393)
73 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.6E-31 5.5E-36 316.0 44.6 320 725-1091 113-440 (445)
74 4a11_B DNA excision repair pro 100.0 1.5E-31 5.3E-36 309.1 43.0 299 775-1091 39-363 (408)
75 2pm7_B Protein transport prote 100.0 5.1E-32 1.7E-36 303.2 36.1 252 775-1036 5-284 (297)
76 3dw8_B Serine/threonine-protei 100.0 3.2E-32 1.1E-36 320.3 36.0 301 777-1090 26-443 (447)
77 3v7d_B Cell division control p 100.0 4.1E-31 1.4E-35 313.6 45.2 320 724-1089 115-459 (464)
78 2oaj_A Protein SNI1; WD40 repe 100.0 8.8E-32 3E-36 346.6 42.5 330 743-1091 67-659 (902)
79 4aow_A Guanine nucleotide-bind 100.0 8.7E-32 3E-36 303.9 36.6 301 724-1039 32-339 (340)
80 1yfq_A Cell cycle arrest prote 100.0 9.3E-32 3.2E-36 304.3 36.8 282 775-1085 7-315 (342)
81 3qd2_B Eukaryotic translation 100.0 1.2E-34 4.2E-39 329.0 11.6 280 213-587 7-331 (332)
82 4gga_A P55CDC, cell division c 100.0 5.8E-31 2E-35 309.4 42.6 278 780-1092 106-394 (420)
83 2oaj_A Protein SNI1; WD40 repe 100.0 1.3E-31 4.3E-36 345.1 40.2 198 728-947 15-244 (902)
84 4aez_A CDC20, WD repeat-contai 100.0 1.4E-31 4.9E-36 312.4 37.0 280 777-1091 89-378 (401)
85 3fe3_A MAP/microtubule affinit 100.0 4.9E-34 1.7E-38 325.4 15.0 252 212-590 15-273 (328)
86 1pgu_A Actin interacting prote 100.0 5.5E-31 1.9E-35 322.3 42.6 321 727-1091 157-612 (615)
87 3vl1_A 26S proteasome regulato 100.0 9.3E-32 3.2E-36 314.0 33.9 277 781-1091 58-363 (420)
88 3zgw_A Maternal embryonic leuc 100.0 4.5E-34 1.5E-38 328.0 13.5 250 214-588 12-267 (347)
89 3mmy_A MRNA export factor; mRN 100.0 2E-31 6.9E-36 303.2 34.9 287 774-1090 34-343 (368)
90 4ggc_A P55CDC, cell division c 100.0 1.3E-30 4.3E-35 291.4 40.7 276 782-1092 28-314 (318)
91 1pgu_A Actin interacting prote 100.0 8.1E-31 2.8E-35 320.9 42.5 340 723-1091 56-570 (615)
92 3mkq_A Coatomer beta'-subunit; 100.0 4.1E-31 1.4E-35 335.8 40.7 287 774-1091 8-300 (814)
93 3sfz_A APAF-1, apoptotic pepti 100.0 3.5E-31 1.2E-35 352.9 41.6 340 725-1091 610-1032(1249)
94 1tki_A Titin; serine kinase, m 100.0 6.4E-34 2.2E-38 323.5 13.0 251 213-589 6-265 (321)
95 3fxz_A Serine/threonine-protei 100.0 1.4E-33 4.9E-38 316.8 15.5 250 214-589 22-277 (297)
96 3k26_A Polycomb protein EED; W 100.0 1.6E-31 5.6E-36 304.1 32.5 296 726-1036 14-365 (366)
97 3bg1_A Protein SEC13 homolog; 100.0 2.2E-32 7.4E-37 309.2 24.8 252 824-1091 9-291 (316)
98 3soa_A Calcium/calmodulin-depe 100.0 5.4E-33 1.8E-37 329.4 20.2 252 213-588 12-274 (444)
99 3o0g_A Cell division protein k 100.0 1.6E-33 5.6E-38 314.9 14.3 245 220-588 12-289 (292)
100 3sfz_A APAF-1, apoptotic pepti 100.0 1.6E-31 5.6E-36 356.1 35.9 313 747-1091 716-1156(1249)
101 3bg1_A Protein SEC13 homolog; 100.0 8.7E-32 3E-36 304.3 28.3 254 774-1036 8-292 (316)
102 1o6l_A RAC-beta serine/threoni 100.0 1.5E-33 5.1E-38 322.5 13.8 250 213-588 6-267 (337)
103 2pmi_A Negative RE, cyclin-dep 100.0 1.8E-33 6.2E-38 318.9 14.3 255 212-590 5-302 (317)
104 3v7d_B Cell division control p 100.0 1.7E-30 5.7E-35 308.3 40.5 276 775-1091 117-419 (464)
105 3txo_A PKC-L, NPKC-ETA, protei 100.0 4E-34 1.4E-38 329.4 8.4 251 212-588 23-287 (353)
106 4gga_A P55CDC, cell division c 100.0 2.8E-30 9.6E-35 303.6 41.2 278 741-1042 112-400 (420)
107 3f3f_A Nucleoporin SEH1; struc 100.0 9.4E-31 3.2E-35 293.9 35.4 267 774-1044 6-344 (351)
108 1p22_A F-BOX/WD-repeat protein 100.0 7.9E-31 2.7E-35 309.6 35.5 279 776-1091 130-412 (435)
109 1gxr_A ESG1, transducin-like e 100.0 3.3E-30 1.1E-34 289.8 38.8 285 728-1035 49-335 (337)
110 3mkq_A Coatomer beta'-subunit; 100.0 2.3E-30 7.7E-35 329.0 42.2 338 725-1091 8-384 (814)
111 3dm0_A Maltose-binding peripla 100.0 8.9E-31 3E-35 328.3 37.0 292 724-1036 376-692 (694)
112 2yab_A Death-associated protei 100.0 3.8E-33 1.3E-37 322.1 13.8 250 214-588 14-279 (361)
113 3niz_A Rhodanese family protei 100.0 5.7E-33 1.9E-37 314.0 14.7 250 213-588 22-307 (311)
114 4aez_A CDC20, WD repeat-contai 100.0 5.6E-30 1.9E-34 298.9 40.1 280 741-1043 100-386 (401)
115 3p1a_A MYT1 kinase, membrane-a 100.0 3.3E-33 1.1E-37 315.9 12.1 244 214-587 59-310 (311)
116 3c0i_A Peripheral plasma membr 100.0 5.9E-33 2E-37 319.5 14.4 251 213-588 25-293 (351)
117 3mtl_A Cell division protein k 100.0 2.2E-33 7.4E-38 319.3 10.6 248 220-591 12-291 (324)
118 1ob3_A PFPK5, cell division co 100.0 7.4E-33 2.5E-37 309.1 14.6 242 221-587 13-286 (288)
119 4ggc_A P55CDC, cell division c 100.0 1.1E-29 3.6E-34 283.9 40.2 275 741-1039 32-317 (318)
120 1sq9_A Antiviral protein SKI8; 100.0 8.3E-31 2.8E-35 303.2 32.2 296 724-1038 10-396 (397)
121 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1E-29 3.5E-34 300.6 42.0 274 775-1091 114-389 (445)
122 4dc2_A Protein kinase C IOTA t 100.0 2.1E-33 7.2E-38 327.7 10.0 254 210-588 50-325 (396)
123 2bdw_A Hypothetical protein K1 100.0 3.2E-32 1.1E-36 314.7 19.8 251 213-588 30-291 (362)
124 1xjd_A Protein kinase C, theta 100.0 3.3E-33 1.1E-37 320.6 11.4 250 213-588 18-276 (345)
125 1cm8_A Phosphorylated MAP kina 100.0 1.3E-32 4.3E-37 318.7 16.2 257 214-593 27-319 (367)
126 3tki_A Serine/threonine-protei 100.0 1.2E-33 4E-38 321.5 7.1 254 213-588 8-268 (323)
127 3oz6_A Mitogen-activated prote 100.0 8.3E-33 2.8E-37 322.5 14.4 276 214-592 11-339 (388)
128 2x4f_A Myosin light chain kina 100.0 7.6E-33 2.6E-37 321.2 13.6 246 219-589 98-350 (373)
129 3jrp_A Fusion protein of prote 100.0 2.3E-30 7.8E-35 296.1 34.0 254 823-1091 6-285 (379)
130 1kob_A Twitchin; kinase, intra 100.0 1.2E-32 4E-37 320.9 15.1 251 213-588 52-311 (387)
131 2zv2_A Calcium/calmodulin-depe 100.0 6E-33 2E-37 311.3 12.1 252 212-586 13-297 (298)
132 1fot_A TPK1 delta, CAMP-depend 100.0 6.4E-33 2.2E-37 314.8 12.3 248 212-588 6-265 (318)
133 3g33_A Cell division protein k 100.0 2.5E-32 8.5E-37 307.7 17.0 255 214-588 11-303 (308)
134 3a8x_A Protein kinase C IOTA t 100.0 6.8E-33 2.3E-37 318.2 12.4 253 211-588 8-282 (345)
135 3i2n_A WD repeat-containing pr 100.0 1.6E-30 5.4E-35 295.3 31.7 298 725-1039 13-355 (357)
136 4aw2_A Serine/threonine-protei 100.0 5.9E-33 2E-37 328.1 11.7 253 214-588 76-345 (437)
137 2y0a_A Death-associated protei 100.0 1.1E-32 3.8E-37 313.8 12.9 250 214-588 13-278 (326)
138 3odt_A Protein DOA1; ubiquitin 100.0 1.2E-29 4E-34 282.6 37.1 291 723-1044 11-303 (313)
139 2i0e_A Protein kinase C-beta I 100.0 1.5E-32 5.1E-37 316.2 13.9 251 212-588 20-283 (353)
140 2w4o_A Calcium/calmodulin-depe 100.0 4.8E-32 1.6E-36 311.6 18.0 241 220-588 63-312 (349)
141 3ei3_B DNA damage-binding prot 100.0 3.6E-30 1.2E-34 297.5 33.8 285 726-1037 69-382 (383)
142 1ua2_A CAK, cell division prot 100.0 1.3E-32 4.4E-37 315.9 13.0 257 212-592 10-302 (346)
143 4ejn_A RAC-alpha serine/threon 100.0 1.6E-32 5.5E-37 326.2 14.1 251 212-588 148-411 (446)
144 1nxk_A MAP kinase-activated pr 100.0 1.3E-32 4.5E-37 322.2 12.7 245 219-588 71-328 (400)
145 3nyv_A Calmodulin-domain prote 100.0 6.9E-32 2.4E-36 324.1 19.2 251 213-589 27-289 (484)
146 2c30_A Serine/threonine-protei 100.0 4.6E-32 1.6E-36 308.1 16.5 244 218-588 53-301 (321)
147 3gni_B Strad alpha; kinase fol 100.0 1.7E-32 5.9E-37 319.8 13.3 253 222-590 39-342 (389)
148 3kn6_A Ribosomal protein S6 ki 100.0 7.7E-33 2.6E-37 315.1 9.9 244 219-590 20-279 (325)
149 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.5E-32 8.6E-37 314.0 14.0 249 211-588 40-300 (350)
150 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.3E-33 1.5E-37 318.5 7.2 252 209-588 6-265 (336)
151 3uc3_A Serine/threonine-protei 100.0 3.3E-32 1.1E-36 314.5 14.6 249 213-588 21-281 (361)
152 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.3E-32 4.3E-37 313.6 10.9 254 210-588 32-325 (329)
153 3kk8_A Calcium/calmodulin depe 100.0 4.1E-32 1.4E-36 301.8 14.5 255 213-592 7-272 (284)
154 3a62_A Ribosomal protein S6 ki 100.0 2.9E-32 9.9E-37 310.5 13.5 253 212-588 17-283 (327)
155 3lij_A Calcium/calmodulin depe 100.0 3.8E-32 1.3E-36 327.2 15.0 250 213-588 38-298 (494)
156 4fr4_A YANK1, serine/threonine 100.0 1.3E-32 4.6E-37 319.8 10.6 253 210-588 13-278 (384)
157 3rp9_A Mitogen-activated prote 100.0 5.4E-32 1.8E-36 322.8 15.7 286 214-592 55-407 (458)
158 3mwu_A Calmodulin-domain prote 100.0 8.2E-32 2.8E-36 323.7 17.2 251 213-589 23-284 (486)
159 3ttj_A Mitogen-activated prote 100.0 1.6E-32 5.4E-37 327.6 10.9 257 213-591 63-365 (464)
160 3is5_A Calcium-dependent prote 100.0 8.2E-32 2.8E-36 300.3 15.6 250 213-587 23-284 (285)
161 2qr7_A Ribosomal protein S6 ki 100.0 7.9E-32 2.7E-36 309.0 15.8 249 213-589 23-285 (342)
162 3v8s_A RHO-associated protein 100.0 1.9E-32 6.5E-37 321.3 10.5 252 213-588 70-336 (410)
163 2r5t_A Serine/threonine-protei 100.0 5.3E-32 1.8E-36 313.9 14.0 250 212-588 38-300 (373)
164 3jrp_A Fusion protein of prote 100.0 9.1E-30 3.1E-34 291.1 32.3 255 774-1038 6-288 (379)
165 3mi9_A Cell division protein k 100.0 5E-32 1.7E-36 311.2 13.6 270 211-592 16-322 (351)
166 2vd5_A DMPK protein; serine/th 100.0 3.2E-32 1.1E-36 319.5 12.0 253 213-588 62-334 (412)
167 3f3f_A Nucleoporin SEH1; struc 100.0 1.8E-29 6.3E-34 283.4 33.9 261 823-1091 6-335 (351)
168 2fst_X Mitogen-activated prote 100.0 2.5E-32 8.4E-37 316.2 10.7 257 214-593 31-323 (367)
169 3q5i_A Protein kinase; CDPK, m 100.0 1.1E-31 3.7E-36 324.1 16.1 280 183-589 8-309 (504)
170 3zwl_B Eukaryotic translation 100.0 4.3E-29 1.5E-33 284.1 36.7 288 724-1041 26-350 (369)
171 2y94_A 5'-AMP-activated protei 100.0 2.4E-32 8.1E-37 326.2 10.1 249 213-588 17-273 (476)
172 4a11_B DNA excision repair pro 100.0 2.7E-29 9.1E-34 290.3 35.2 328 724-1091 37-403 (408)
173 1x8b_A WEE1HU, WEE1-like prote 100.0 8.8E-32 3E-36 298.7 13.6 246 213-588 12-286 (289)
174 2ac3_A MAP kinase-interacting 100.0 4.8E-32 1.6E-36 306.3 11.6 252 219-588 22-302 (316)
175 3f3z_A Calcium/calmodulin-depe 100.0 1.2E-31 4E-36 297.1 14.3 251 214-591 11-271 (277)
176 1zy4_A Serine/threonine-protei 100.0 1.1E-31 3.6E-36 300.5 13.7 276 213-588 7-290 (303)
177 2j04_B YDR362CP, TAU91; beta p 100.0 9.8E-31 3.3E-35 316.5 23.1 260 777-1091 131-426 (524)
178 3pfq_A PKC-B, PKC-beta, protei 100.0 5.7E-32 1.9E-36 336.8 12.5 252 211-588 340-604 (674)
179 2eue_A Carbon catabolite derep 100.0 7.1E-32 2.4E-36 298.8 11.9 250 211-588 12-269 (275)
180 3vu4_A KMHSV2; beta-propeller 100.0 3.9E-29 1.3E-33 287.6 35.1 288 775-1091 15-334 (355)
181 3dls_A PAS domain-containing s 100.0 5.9E-32 2E-36 309.1 11.4 245 214-588 26-281 (335)
182 2xyi_A Probable histone-bindin 100.0 2.1E-29 7.3E-34 297.3 33.6 262 822-1091 122-408 (430)
183 1u5q_A Serine/threonine protei 100.0 1.2E-31 4.2E-36 308.1 14.0 241 220-588 64-312 (348)
184 3n9x_A Phosphotransferase; mal 100.0 2.1E-31 7.1E-36 315.3 15.7 282 214-593 28-373 (432)
185 3eqc_A Dual specificity mitoge 100.0 1.4E-31 4.7E-36 308.7 13.8 249 214-588 35-331 (360)
186 2a2a_A Death-associated protei 100.0 2E-31 6.8E-36 302.5 14.9 250 214-588 14-279 (321)
187 3l9p_A Anaplastic lymphoma kin 100.0 1E-31 3.6E-36 311.0 12.8 256 214-587 73-344 (367)
188 2zmd_A Dual specificity protei 100.0 1.6E-31 5.5E-36 312.0 14.5 251 214-589 58-328 (390)
189 3ork_A Serine/threonine protei 100.0 3.2E-32 1.1E-36 307.6 8.2 258 214-588 14-280 (311)
190 3q60_A ROP5B; pseudokinase, tr 100.0 2.3E-32 7.9E-37 316.8 7.2 262 214-590 64-361 (371)
191 3lb7_A RAF proto-oncogene seri 100.0 3.4E-31 1.2E-35 299.0 16.4 249 213-586 37-298 (307)
192 2aq5_A Coronin-1A; WD40 repeat 100.0 1.2E-29 4.1E-34 295.8 30.0 283 783-1091 38-340 (402)
193 3cok_A Serine/threonine-protei 100.0 4.3E-32 1.5E-36 300.8 8.5 254 211-589 10-270 (278)
194 3llt_A Serine/threonine kinase 100.0 1.2E-31 4E-36 309.1 12.4 244 214-586 37-360 (360)
195 2psq_A Fibroblast growth facto 100.0 2.5E-31 8.4E-36 308.2 15.2 252 213-582 82-358 (370)
196 3dbq_A Dual specificity protei 100.0 1.6E-31 5.6E-36 306.3 13.4 243 221-588 20-280 (343)
197 3gre_A Serine/threonine-protei 100.0 5.3E-30 1.8E-34 301.5 26.6 299 727-1034 60-437 (437)
198 3fme_A Dual specificity mitoge 100.0 1.7E-31 5.8E-36 297.6 12.8 251 213-588 8-273 (290)
199 3lm5_A Serine/threonine-protei 100.0 1.4E-31 4.8E-36 304.7 12.4 245 220-588 39-294 (327)
200 3fdn_A Serine/threonine-protei 100.0 1.4E-31 4.7E-36 297.1 12.0 250 212-589 9-265 (279)
201 4agu_A Cyclin-dependent kinase 100.0 1.3E-31 4.4E-36 302.0 11.5 247 221-591 14-294 (311)
202 2r3i_A Cell division protein k 100.0 1.9E-31 6.7E-36 298.6 12.9 254 214-591 5-293 (299)
203 3qyz_A Mitogen-activated prote 100.0 1.8E-31 6.2E-36 308.4 13.0 261 214-592 29-324 (364)
204 1t4h_A Serine/threonine-protei 100.0 2.4E-31 8.2E-36 296.9 13.3 247 218-587 34-288 (290)
205 3an0_A Dual specificity mitoge 100.0 2.4E-31 8.2E-36 304.0 13.5 245 220-589 61-318 (340)
206 1k8k_C P40, ARP2/3 complex 41 100.0 7.9E-29 2.7E-33 283.3 34.2 248 826-1091 6-272 (372)
207 2acx_A G protein-coupled recep 100.0 9.5E-32 3.2E-36 325.8 10.4 243 221-588 195-451 (576)
208 4aaa_A Cyclin-dependent kinase 100.0 8.8E-32 3E-36 306.7 9.4 254 211-588 24-313 (331)
209 3hko_A Calcium/calmodulin-depe 100.0 1.2E-31 4E-36 306.9 10.5 258 214-590 28-339 (345)
210 3p86_A Serine/threonine-protei 100.0 2E-31 6.8E-36 301.2 12.2 252 210-586 35-298 (309)
211 3kvw_A DYRK2, dual specificity 100.0 1.7E-31 6E-36 315.6 11.9 248 214-588 99-415 (429)
212 3kul_A Ephrin type-A receptor 100.0 3.4E-31 1.2E-35 301.4 13.9 253 212-582 49-307 (325)
213 3poz_A Epidermal growth factor 100.0 1.7E-31 5.7E-36 304.1 11.2 250 214-582 17-272 (327)
214 3i6u_A CDS1, serine/threonine- 100.0 9.1E-32 3.1E-36 317.1 9.1 249 214-588 137-406 (419)
215 3vhe_A Vascular endothelial gr 100.0 2.2E-31 7.4E-36 306.5 12.0 254 214-583 24-350 (359)
216 3a7i_A MST3 kinase, serine/thr 100.0 3.7E-31 1.3E-35 297.3 13.6 242 221-588 33-277 (303)
217 2x7f_A TRAF2 and NCK-interacti 100.0 3.4E-31 1.2E-35 300.6 13.4 257 213-588 25-293 (326)
218 3rgf_A Cyclin-dependent kinase 100.0 2.6E-31 8.9E-36 311.7 12.7 254 218-592 29-344 (405)
219 2vwi_A Serine/threonine-protei 100.0 2.1E-31 7.2E-36 298.5 11.4 258 214-589 17-295 (303)
220 2yex_A Serine/threonine-protei 100.0 2.2E-31 7.6E-36 294.4 10.8 254 213-588 8-268 (276)
221 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.4E-31 1.1E-35 320.1 13.3 244 221-588 196-455 (543)
222 3dwl_C Actin-related protein 2 100.0 4E-30 1.4E-34 295.9 21.7 251 826-1091 9-279 (377)
223 3byv_A Rhoptry kinase; malaria 100.0 7.1E-32 2.4E-36 313.4 6.9 261 213-590 74-368 (377)
224 1j1b_A Glycogen synthase kinas 100.0 3.2E-31 1.1E-35 312.5 12.5 254 214-591 56-346 (420)
225 3kex_A Receptor tyrosine-prote 100.0 2.4E-31 8.2E-36 302.5 11.0 240 220-582 23-270 (325)
226 2jam_A Calcium/calmodulin-depe 100.0 7.8E-31 2.7E-35 294.9 15.0 249 213-588 10-268 (304)
227 3fhr_A MAP kinase-activated pr 100.0 3.5E-31 1.2E-35 302.8 12.1 244 219-588 38-294 (336)
228 2b9h_A MAP kinase FUS3, mitoge 100.0 2.5E-31 8.7E-36 305.2 10.7 268 214-592 13-316 (353)
229 2y7j_A Phosphorylase B kinase 100.0 6.6E-31 2.2E-35 304.1 13.9 241 221-586 105-364 (365)
230 3eb0_A Putative uncharacterize 100.0 6.6E-31 2.3E-35 305.9 13.9 263 214-590 9-330 (383)
231 3pg1_A Mitogen-activated prote 100.0 8.1E-31 2.8E-35 302.4 14.4 251 221-592 33-327 (362)
232 3lzb_A Epidermal growth factor 100.0 6E-31 2E-35 299.6 13.1 246 214-582 17-272 (327)
233 2rku_A Serine/threonine-protei 100.0 5.9E-31 2E-35 294.3 12.8 256 209-590 12-274 (294)
234 4euu_A Serine/threonine-protei 100.0 3.1E-31 1.1E-35 300.4 10.7 249 214-584 11-305 (319)
235 4e5w_A Tyrosine-protein kinase 100.0 8.5E-31 2.9E-35 293.9 14.1 249 220-582 31-296 (302)
236 4e7w_A Glycogen synthase kinas 100.0 4.2E-31 1.4E-35 308.9 12.1 255 213-591 41-331 (394)
237 4hcu_A Tyrosine-protein kinase 100.0 8.2E-31 2.8E-35 289.2 13.7 244 213-582 11-260 (269)
238 2vgo_A Serine/threonine-protei 100.0 5.1E-31 1.7E-35 293.3 12.0 249 213-589 15-270 (284)
239 3tt0_A Basic fibroblast growth 100.0 1.3E-30 4.4E-35 303.5 15.9 252 214-583 71-347 (382)
240 4exu_A Mitogen-activated prote 100.0 1.3E-30 4.4E-35 302.3 15.8 249 220-592 52-334 (371)
241 2xyi_A Probable histone-bindin 100.0 1.3E-28 4.4E-33 290.6 33.2 263 775-1037 124-410 (430)
242 1mp8_A Focal adhesion kinase 1 100.0 5.5E-31 1.9E-35 292.8 12.1 248 214-582 17-270 (281)
243 1vzo_A Ribosomal protein S6 ki 100.0 2E-31 7E-36 307.1 9.0 257 211-588 53-328 (355)
244 2owb_A Serine/threonine-protei 100.0 9E-31 3.1E-35 299.1 14.2 252 212-589 41-299 (335)
245 2j7t_A Serine/threonine-protei 100.0 3.1E-31 1.1E-35 297.4 10.2 251 214-588 21-282 (302)
246 4gq1_A NUP37; propeller, trans 100.0 4.2E-29 1.4E-33 291.4 28.5 295 781-1091 17-387 (393)
247 3com_A Serine/threonine-protei 100.0 1.2E-30 4E-35 294.6 14.9 243 221-589 40-286 (314)
248 3bhy_A Death-associated protei 100.0 7.7E-31 2.6E-35 291.4 13.1 245 221-590 16-274 (283)
249 4e54_B DNA damage-binding prot 100.0 2.7E-29 9.2E-34 296.8 26.8 273 747-1040 135-433 (435)
250 3nsz_A CK II alpha, casein kin 100.0 9E-31 3.1E-35 297.7 13.6 246 213-588 37-326 (330)
251 3e3p_A Protein kinase, putativ 100.0 2.9E-31 9.9E-36 305.5 9.6 260 213-592 24-325 (360)
252 2xrw_A Mitogen-activated prote 100.0 7.4E-31 2.5E-35 304.2 12.8 258 213-592 26-329 (371)
253 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.8E-28 2E-32 286.5 37.4 288 780-1091 5-389 (450)
254 1rjb_A FL cytokine receptor; k 100.0 7.5E-31 2.6E-35 300.3 12.0 253 214-583 47-329 (344)
255 3cbl_A C-FES, proto-oncogene t 100.0 6.7E-31 2.3E-35 305.3 11.6 248 213-582 115-368 (377)
256 1p22_A F-BOX/WD-repeat protein 100.0 2.5E-28 8.5E-33 288.2 33.3 272 744-1042 143-419 (435)
257 2clq_A Mitogen-activated prote 100.0 1.5E-30 5E-35 290.7 13.4 247 219-589 31-286 (295)
258 4eqm_A Protein kinase; transfe 100.0 1.5E-30 5.2E-35 291.6 13.4 252 214-588 13-274 (294)
259 3pls_A Macrophage-stimulating 100.0 1.9E-30 6.3E-35 290.3 14.0 249 219-582 30-281 (298)
260 1luf_A Muscle-specific tyrosin 100.0 1.8E-30 6E-35 296.8 14.0 252 213-582 48-329 (343)
261 3s95_A LIMK-1, LIM domain kina 100.0 8.4E-31 2.9E-35 295.5 11.2 249 220-581 20-275 (310)
262 2qol_A Ephrin receptor; recept 100.0 2.1E-30 7.2E-35 300.7 14.8 244 220-581 55-302 (373)
263 3f66_A Hepatocyte growth facto 100.0 1.8E-30 6.2E-35 290.8 13.6 253 214-582 27-285 (298)
264 2ivs_A Proto-oncogene tyrosine 100.0 1.3E-30 4.4E-35 293.9 12.3 252 213-582 24-305 (314)
265 1t46_A HOMO sapiens V-KIT hard 100.0 1.4E-30 4.9E-35 293.4 12.6 253 213-582 24-301 (313)
266 2w5a_A Serine/threonine-protei 100.0 3.9E-31 1.3E-35 293.1 7.5 258 211-590 5-276 (279)
267 2aq5_A Coronin-1A; WD40 repeat 100.0 1.6E-28 5.3E-33 286.4 29.8 278 750-1039 53-344 (402)
268 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.6E-30 5.4E-35 286.6 12.1 237 221-583 19-259 (268)
269 3gen_A Tyrosine-protein kinase 100.0 2.4E-30 8.2E-35 287.6 13.5 245 213-583 25-275 (283)
270 3og7_A AKAP9-BRAF fusion prote 100.0 1.8E-30 6.2E-35 289.9 12.6 238 220-582 34-282 (289)
271 2h6d_A 5'-AMP-activated protei 100.0 1.9E-30 6.6E-35 287.1 12.5 248 214-588 13-268 (276)
272 3coi_A Mitogen-activated prote 100.0 2.7E-30 9.2E-35 297.2 14.1 255 214-592 26-316 (353)
273 3cc6_A Protein tyrosine kinase 100.0 1.6E-30 5.3E-35 288.9 11.7 249 213-582 13-267 (281)
274 1phk_A Phosphorylase kinase; g 100.0 2.6E-30 8.8E-35 289.4 13.3 251 213-588 18-290 (298)
275 3dw8_B Serine/threonine-protei 100.0 6E-29 2E-33 292.4 25.5 257 825-1091 25-371 (447)
276 3c1x_A Hepatocyte growth facto 100.0 1.6E-30 5.5E-35 301.6 11.8 248 219-582 98-349 (373)
277 3qup_A Tyrosine-protein kinase 100.0 2E-30 6.7E-35 294.1 12.3 255 221-588 34-305 (323)
278 3ugc_A Tyrosine-protein kinase 100.0 1.5E-30 5.2E-35 291.1 11.2 254 214-582 12-285 (295)
279 4fvq_A Tyrosine-protein kinase 100.0 8.1E-31 2.8E-35 292.1 8.9 243 213-582 9-269 (289)
280 2a19_B Interferon-induced, dou 100.0 4.6E-30 1.6E-34 284.8 14.8 256 214-587 13-273 (284)
281 1blx_A Cyclin-dependent kinase 100.0 4.1E-30 1.4E-34 291.6 14.6 258 213-589 12-304 (326)
282 4h5i_A Guanine nucleotide-exch 100.0 1.8E-28 6.2E-33 283.3 28.6 270 753-1037 42-343 (365)
283 2yfx_A Tyrosine-protein kinase 100.0 2.8E-30 9.5E-35 293.7 13.1 257 213-587 31-303 (327)
284 2pml_X PFPK7, Ser/Thr protein 100.0 6.9E-31 2.4E-35 300.9 8.0 249 213-588 32-329 (348)
285 1u59_A Tyrosine-protein kinase 100.0 2.5E-30 8.6E-35 288.3 12.0 245 219-583 19-267 (287)
286 3aln_A Dual specificity mitoge 100.0 2.9E-30 9.8E-35 293.5 12.6 252 213-589 23-293 (327)
287 1p4o_A Insulin-like growth fac 100.0 3E-30 1E-34 292.4 12.7 251 214-582 27-293 (322)
288 2ycf_A Serine/threonine-protei 100.0 9.5E-31 3.3E-35 296.9 8.4 249 213-587 11-280 (322)
289 2vx3_A Dual specificity tyrosi 100.0 1.4E-30 4.9E-35 303.0 10.0 247 213-588 55-379 (382)
290 2xir_A Vascular endothelial gr 100.0 2E-30 6.7E-35 292.7 10.8 255 213-583 28-305 (316)
291 1wak_A Serine/threonine-protei 100.0 8.5E-31 2.9E-35 305.2 8.1 297 214-586 39-396 (397)
292 1mqb_A Ephrin type-A receptor 100.0 4.9E-30 1.7E-34 292.8 14.2 246 220-582 54-303 (333)
293 1z57_A Dual specificity protei 100.0 2.1E-30 7.2E-35 294.8 10.6 247 214-589 16-336 (339)
294 2i6l_A Mitogen-activated prote 100.0 3.5E-30 1.2E-34 290.7 12.3 266 214-591 13-315 (320)
295 3kmu_A ILK, integrin-linked ki 100.0 5.9E-30 2E-34 281.7 13.4 244 211-582 9-264 (271)
296 1fvr_A Tyrosine-protein kinase 100.0 2.6E-30 9E-35 293.9 10.9 249 210-583 23-295 (327)
297 3dtc_A Mitogen-activated prote 100.0 2.7E-30 9.3E-35 285.1 10.4 242 212-582 7-267 (271)
298 2i1m_A Macrophage colony-stimu 100.0 3.2E-30 1.1E-34 293.7 11.2 245 221-582 57-320 (333)
299 3soc_A Activin receptor type-2 100.0 3.6E-30 1.2E-34 292.4 11.5 240 220-582 34-312 (322)
300 3t9t_A Tyrosine-protein kinase 100.0 5.7E-30 1.9E-34 281.6 12.6 244 213-582 9-258 (267)
301 3uim_A Brassinosteroid insensi 100.0 9.4E-30 3.2E-34 288.9 14.4 250 214-586 32-309 (326)
302 2dyl_A Dual specificity mitoge 100.0 3.9E-30 1.3E-34 290.5 11.2 253 211-588 24-290 (318)
303 2izr_A Casein kinase I isoform 100.0 6.9E-30 2.4E-34 290.9 13.1 241 221-581 20-274 (330)
304 2wei_A Calmodulin-domain prote 100.0 1.2E-29 4.1E-34 282.8 14.7 248 214-588 24-283 (287)
305 2j04_A TAU60, YPL007P, hypothe 100.0 1E-28 3.5E-33 293.5 23.3 265 777-1091 13-295 (588)
306 4f0f_A Serine/threonine-protei 100.0 2E-29 6.8E-34 280.7 15.8 242 213-582 20-283 (287)
307 2pvf_A Fibroblast growth facto 100.0 8.9E-30 3E-34 290.5 13.3 252 213-582 36-312 (334)
308 3jro_A Fusion protein of prote 100.0 2.6E-28 8.9E-33 308.9 28.0 253 823-1091 4-283 (753)
309 1csn_A Casein kinase-1; phosph 100.0 1.3E-29 4.3E-34 283.6 13.7 249 214-582 12-277 (298)
310 3lxl_A Tyrosine-protein kinase 100.0 9.8E-30 3.3E-34 289.2 12.6 254 214-582 25-297 (327)
311 1yfq_A Cell cycle arrest prote 100.0 1.3E-27 4.4E-32 270.2 29.9 276 728-1034 9-321 (342)
312 3p23_A Serine/threonine-protei 100.0 6.2E-30 2.1E-34 302.4 10.9 241 220-588 34-290 (432)
313 3cek_A Dual specificity protei 100.0 1.5E-29 5.3E-34 285.6 13.5 252 214-590 30-301 (313)
314 3lrv_A PRE-mRNA-splicing facto 100.0 7.4E-28 2.5E-32 274.8 27.6 265 787-1089 44-329 (343)
315 3lxp_A Non-receptor tyrosine-p 100.0 1.5E-29 5.1E-34 286.7 13.4 246 220-581 41-303 (318)
316 3op5_A Serine/threonine-protei 100.0 5.3E-30 1.8E-34 296.2 9.8 259 213-582 36-323 (364)
317 2j04_A TAU60, YPL007P, hypothe 100.0 7.2E-28 2.5E-32 286.4 28.1 293 741-1082 22-350 (588)
318 2wtk_C Serine/threonine-protei 100.0 1.9E-29 6.5E-34 283.3 13.7 255 214-590 7-272 (305)
319 3qa8_A MGC80376 protein; kinas 100.0 1.3E-29 4.5E-34 310.1 13.2 266 209-592 11-308 (676)
320 2qkw_B Protein kinase; three-h 100.0 6.1E-30 2.1E-34 290.1 9.1 241 220-583 49-310 (321)
321 1u46_A ACK-1, activated CDC42 100.0 1.1E-29 3.8E-34 282.9 11.1 252 213-582 19-278 (291)
322 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.8E-29 6.2E-34 285.3 12.6 248 213-582 34-296 (319)
323 2v62_A Serine/threonine-protei 100.0 4.3E-30 1.5E-34 294.7 7.4 258 213-582 38-322 (345)
324 2ozo_A Tyrosine-protein kinase 100.0 2.4E-29 8.3E-34 310.1 14.5 243 219-581 345-591 (613)
325 3kfa_A Tyrosine-protein kinase 100.0 1.6E-29 5.3E-34 281.5 11.6 238 220-582 23-265 (288)
326 2eu9_A Dual specificity protei 100.0 7.3E-30 2.5E-34 292.4 9.1 247 213-588 20-340 (355)
327 2eva_A TAK1 kinase - TAB1 chim 100.0 2.5E-29 8.5E-34 283.5 13.1 240 210-582 6-257 (307)
328 1qcf_A Haematopoetic cell kina 100.0 1.8E-29 6E-34 300.8 12.5 243 213-582 189-438 (454)
329 3a99_A Proto-oncogene serine/t 100.0 7.1E-30 2.4E-34 289.7 8.1 243 213-589 44-301 (320)
330 3jro_A Fusion protein of prote 100.0 7.9E-28 2.7E-32 304.5 27.6 255 774-1038 4-286 (753)
331 1opk_A P150, C-ABL, proto-onco 100.0 2E-29 6.8E-34 303.4 12.2 245 213-582 221-472 (495)
332 3e7e_A HBUB1, BUB1A, mitotic c 100.0 9.8E-30 3.4E-34 293.9 9.0 250 214-584 67-334 (365)
333 2rio_A Serine/threonine-protei 100.0 1.7E-29 5.9E-34 299.0 11.3 243 220-587 25-301 (434)
334 3q4u_A Activin receptor type-1 100.0 1.4E-29 4.7E-34 283.7 9.8 246 214-582 10-296 (301)
335 1q8y_A SR protein kinase; tran 100.0 6.1E-30 2.1E-34 295.8 7.0 249 214-589 21-341 (373)
336 2iwi_A Serine/threonine-protei 100.0 1.6E-29 5.5E-34 285.2 10.3 243 214-590 33-292 (312)
337 1xbb_A Tyrosine-protein kinase 100.0 3.1E-29 1.1E-33 280.1 12.2 243 219-582 26-273 (291)
338 3brb_A Proto-oncogene tyrosine 100.0 3.7E-29 1.3E-33 282.3 12.9 255 214-582 36-302 (313)
339 3bws_A Protein LP49; two-domai 100.0 1.1E-26 3.7E-31 272.5 34.3 280 781-1091 124-430 (433)
340 2wqm_A Serine/threonine-protei 100.0 3.7E-29 1.3E-33 281.9 12.6 250 210-582 30-291 (310)
341 3mdy_A Bone morphogenetic prot 100.0 3.9E-29 1.3E-33 284.6 12.7 249 213-582 38-325 (337)
342 1k9a_A Carboxyl-terminal SRC k 100.0 3.3E-29 1.1E-33 298.0 12.6 237 213-581 194-438 (450)
343 1qpc_A LCK kinase; alpha beta 100.0 3.1E-29 1.1E-33 277.9 11.1 241 214-581 15-262 (279)
344 2w1i_A JAK2; chromosomal rearr 100.0 6.7E-29 2.3E-33 282.3 13.9 246 221-581 52-315 (326)
345 3g2f_A Bone morphogenetic prot 100.0 2.6E-29 9E-34 286.3 10.3 254 213-582 14-312 (336)
346 2buj_A Serine/threonine-protei 100.0 4.3E-29 1.5E-33 282.1 11.8 259 214-583 31-301 (317)
347 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.5E-29 1.6E-33 297.0 12.3 242 214-582 186-434 (452)
348 4eut_A Serine/threonine-protei 100.0 1.4E-29 4.8E-34 296.2 6.6 248 214-583 11-304 (396)
349 2h34_A Serine/threonine-protei 100.0 6.4E-29 2.2E-33 280.3 11.8 248 210-581 32-289 (309)
350 1byg_A CSK, protein (C-termina 100.0 3E-29 1E-33 278.2 8.8 240 211-581 20-266 (278)
351 4hgt_A Casein kinase I isoform 100.0 1.1E-28 3.7E-33 275.5 13.0 249 214-581 11-273 (296)
352 3mmy_A MRNA export factor; mRN 100.0 3E-26 1E-30 260.5 33.3 284 723-1035 32-344 (368)
353 1l0q_A Surface layer protein; 100.0 1.9E-25 6.6E-30 258.1 40.2 272 748-1047 6-285 (391)
354 4fl3_A Tyrosine-protein kinase 100.0 7.5E-29 2.6E-33 306.6 12.3 244 218-582 377-625 (635)
355 3uzp_A CKI-delta, CKID, casein 100.0 1.1E-28 3.6E-33 275.8 12.1 250 214-582 11-274 (296)
356 2j0j_A Focal adhesion kinase 1 100.0 1.3E-28 4.5E-33 305.6 13.8 248 214-582 392-645 (656)
357 3dzo_A Rhoptry kinase domain; 99.9 2.4E-29 8.3E-34 295.8 5.1 170 306-588 182-370 (413)
358 2h8h_A Proto-oncogene tyrosine 99.9 1.3E-28 4.4E-33 299.2 11.2 243 213-582 268-517 (535)
359 2jii_A Serine/threonine-protei 99.9 1.1E-28 3.9E-33 283.5 9.7 263 214-582 44-330 (352)
360 3gxj_A TGF-beta receptor type- 99.9 8.8E-30 3E-34 285.3 0.2 239 221-582 14-291 (303)
361 2nru_A Interleukin-1 receptor- 99.9 1.7E-28 5.8E-33 275.9 10.3 240 219-582 40-300 (307)
362 3sv0_A Casein kinase I-like; t 99.9 5E-28 1.7E-32 289.4 13.9 248 214-581 9-271 (483)
363 1b6c_B TGF-B superfamily recep 99.9 2.3E-28 8E-33 279.0 10.0 246 214-582 44-330 (342)
364 2vdu_B TRNA (guanine-N(7)-)-me 99.9 8.5E-26 2.9E-30 267.8 32.0 251 828-1091 4-337 (450)
365 3ll6_A Cyclin G-associated kin 99.9 8.2E-28 2.8E-32 273.3 12.5 265 214-584 30-304 (337)
366 1l0q_A Surface layer protein; 99.9 5.3E-25 1.8E-29 254.4 36.2 263 792-1091 3-273 (391)
367 3m2w_A MAP kinase-activated pr 99.9 1.7E-27 6E-32 267.2 14.8 229 213-589 18-264 (299)
368 3vu4_A KMHSV2; beta-propeller 99.9 1.9E-25 6.6E-30 256.7 29.8 241 825-1091 16-269 (355)
369 4gq1_A NUP37; propeller, trans 99.9 1.8E-26 6.1E-31 269.2 21.0 243 778-1034 88-386 (393)
370 2vuw_A Serine/threonine-protei 99.9 1.6E-28 5.4E-33 280.4 3.0 166 305-586 139-336 (336)
371 2pzi_A Probable serine/threoni 99.9 5E-28 1.7E-32 302.6 7.6 242 214-588 82-327 (681)
372 3lrv_A PRE-mRNA-splicing facto 99.9 6.7E-26 2.3E-30 258.6 24.3 223 841-1091 48-290 (343)
373 2w18_A PALB2, fancn, partner a 99.9 7.7E-25 2.6E-29 245.8 30.1 185 841-1035 145-355 (356)
374 1nir_A Nitrite reductase; hemo 99.9 2.3E-23 7.8E-28 253.5 38.4 320 749-1091 154-512 (543)
375 3bws_A Protein LP49; two-domai 99.9 1.1E-23 3.7E-28 246.9 34.0 274 742-1036 130-431 (433)
376 2w18_A PALB2, fancn, partner a 99.9 2.2E-22 7.6E-27 225.9 34.9 275 781-1091 41-355 (356)
377 3uqc_A Probable conserved tran 99.9 1.9E-25 6.4E-30 249.4 8.3 215 214-582 33-259 (286)
378 2hqs_A Protein TOLB; TOLB, PAL 99.9 9.5E-22 3.3E-26 231.1 31.6 279 755-1075 94-410 (415)
379 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.5E-21 5E-26 229.5 28.4 277 781-1091 64-385 (415)
380 4azs_A Methyltransferase WBDD; 99.9 2.2E-24 7.7E-29 262.9 3.4 193 260-588 289-482 (569)
381 2ojh_A Uncharacterized protein 99.9 5E-21 1.7E-25 209.7 24.9 258 796-1084 17-293 (297)
382 1nir_A Nitrite reductase; hemo 99.9 2.4E-20 8.3E-25 226.8 32.5 273 786-1091 144-456 (543)
383 3u4y_A Uncharacterized protein 99.9 9E-20 3.1E-24 205.4 33.9 283 786-1091 4-302 (331)
384 1ri6_A Putative isomerase YBHE 99.9 9.5E-20 3.3E-24 205.1 31.8 272 793-1091 7-306 (343)
385 3vgz_A Uncharacterized protein 99.9 4E-19 1.4E-23 201.3 35.4 268 780-1083 41-334 (353)
386 2ecf_A Dipeptidyl peptidase IV 99.9 2.9E-20 9.9E-25 234.0 28.1 280 779-1091 36-411 (741)
387 2oit_A Nucleoporin 214KDA; NH2 99.9 1.3E-19 4.5E-24 214.2 30.4 309 779-1092 36-404 (434)
388 1ri6_A Putative isomerase YBHE 99.8 4.8E-19 1.6E-23 199.3 31.8 270 751-1036 12-307 (343)
389 2ecf_A Dipeptidyl peptidase IV 99.8 2.6E-19 8.8E-24 225.3 32.7 313 741-1091 43-457 (741)
390 2z3z_A Dipeptidyl aminopeptida 99.8 4.2E-19 1.4E-23 222.2 31.7 305 748-1091 39-433 (706)
391 1pby_B Quinohemoprotein amine 99.8 3.8E-19 1.3E-23 199.6 27.6 262 792-1091 2-308 (337)
392 2ojh_A Uncharacterized protein 99.8 6.6E-19 2.3E-23 192.8 25.9 254 751-1028 19-293 (297)
393 1xfd_A DIP, dipeptidyl aminope 99.8 8.6E-19 2.9E-23 219.7 28.8 312 741-1081 23-428 (723)
394 1k32_A Tricorn protease; prote 99.8 1.9E-18 6.7E-23 226.4 33.3 312 741-1091 59-459 (1045)
395 1xfd_A DIP, dipeptidyl aminope 99.8 3.2E-19 1.1E-23 223.7 22.7 275 782-1091 19-391 (723)
396 1pby_B Quinohemoprotein amine 99.8 3E-18 1E-22 192.3 27.7 273 748-1046 5-319 (337)
397 1k32_A Tricorn protease; prote 99.8 4.7E-18 1.6E-22 222.7 33.7 277 775-1091 199-500 (1045)
398 3hfq_A Uncharacterized protein 99.8 1.3E-17 4.4E-22 189.6 31.4 271 799-1091 14-315 (347)
399 3o4h_A Acylamino-acid-releasin 99.8 2.9E-18 9.9E-23 209.9 26.5 265 779-1090 21-312 (582)
400 1jmx_B Amine dehydrogenase; ox 99.8 8.3E-18 2.8E-22 189.9 27.6 261 784-1091 4-323 (349)
401 3u4y_A Uncharacterized protein 99.8 5.6E-17 1.9E-21 182.4 33.8 269 749-1039 15-306 (331)
402 3vgz_A Uncharacterized protein 99.8 1.9E-16 6.6E-21 179.1 31.9 236 828-1091 40-301 (353)
403 3hfq_A Uncharacterized protein 99.8 1.1E-16 3.9E-21 181.8 29.7 251 779-1041 39-323 (347)
404 2z3z_A Dipeptidyl aminopeptida 99.8 1E-16 3.4E-21 200.6 30.9 278 742-1039 89-437 (706)
405 3scy_A Hypothetical bacterial 99.8 4.9E-16 1.7E-20 177.7 34.0 271 791-1091 13-335 (361)
406 2oit_A Nucleoporin 214KDA; NH2 99.7 2E-17 6.8E-22 195.5 20.9 215 851-1091 23-276 (434)
407 3o4h_A Acylamino-acid-releasin 99.7 3.4E-17 1.2E-21 200.3 21.7 232 828-1091 21-274 (582)
408 3scy_A Hypothetical bacterial 99.7 1.5E-15 5.2E-20 173.6 33.4 289 753-1071 26-360 (361)
409 1z68_A Fibroblast activation p 99.7 3.3E-16 1.1E-20 196.4 25.2 315 742-1091 23-441 (719)
410 3pe7_A Oligogalacturonate lyas 99.7 9.3E-16 3.2E-20 176.5 25.8 295 775-1091 26-380 (388)
411 1z68_A Fibroblast activation p 99.7 9.4E-17 3.2E-21 201.4 18.9 271 784-1091 20-389 (719)
412 1jmx_B Amine dehydrogenase; ox 99.7 3E-15 1E-19 168.8 28.6 272 748-1046 15-334 (349)
413 3en9_A Glycoprotease, O-sialog 99.7 1.5E-18 5.1E-23 210.4 0.8 129 219-380 345-480 (540)
414 1jof_A Carboxy-CIS,CIS-muconat 99.7 4.4E-15 1.5E-19 170.7 29.1 243 828-1091 39-339 (365)
415 4a5s_A Dipeptidyl peptidase 4 99.7 3.3E-14 1.1E-18 179.3 33.2 310 741-1082 23-435 (740)
416 1jof_A Carboxy-CIS,CIS-muconat 99.7 3.8E-14 1.3E-18 162.8 30.6 243 779-1038 39-342 (365)
417 1q7f_A NHL, brain tumor CG1071 99.6 1.6E-13 5.6E-18 151.2 32.4 235 828-1091 29-278 (286)
418 3c5m_A Oligogalacturonate lyas 99.6 5E-15 1.7E-19 170.3 19.0 283 781-1091 37-380 (396)
419 2oiz_A Aromatic amine dehydrog 99.6 1.9E-13 6.5E-18 157.3 30.9 285 752-1075 29-360 (361)
420 1q7f_A NHL, brain tumor CG1071 99.6 2.3E-13 7.9E-18 150.0 30.2 244 776-1039 26-282 (286)
421 3azo_A Aminopeptidase; POP fam 99.6 4.5E-14 1.5E-18 175.2 26.8 283 774-1090 18-364 (662)
422 4a5s_A Dipeptidyl peptidase 4 99.6 4.6E-14 1.6E-18 178.0 26.5 243 782-1040 19-356 (740)
423 3fvz_A Peptidyl-glycine alpha- 99.6 4E-13 1.4E-17 152.2 30.3 240 828-1091 23-320 (329)
424 3fvz_A Peptidyl-glycine alpha- 99.6 6.3E-13 2.2E-17 150.5 31.4 241 779-1036 23-321 (329)
425 2oiz_A Aromatic amine dehydrog 99.6 3E-13 1E-17 155.7 27.6 257 799-1091 29-332 (361)
426 2dg1_A DRP35, lactonase; beta 99.6 4.8E-13 1.7E-17 150.7 26.3 279 780-1083 6-300 (333)
427 2gop_A Trilobed protease; beta 99.6 6.8E-13 2.3E-17 150.2 27.6 253 781-1091 16-329 (347)
428 2z2n_A Virginiamycin B lyase; 99.5 4E-11 1.4E-15 131.9 39.0 278 775-1090 10-292 (299)
429 1qks_A Cytochrome CD1 nitrite 99.5 3.5E-11 1.2E-15 146.3 40.3 321 750-1091 173-536 (567)
430 3pe7_A Oligogalacturonate lyas 99.5 1.9E-12 6.6E-17 148.7 25.1 273 741-1036 42-381 (388)
431 2dg1_A DRP35, lactonase; beta 99.5 2.7E-11 9.3E-16 136.3 33.7 234 775-1027 40-300 (333)
432 1zar_A RIO2 kinase; serine kin 99.5 5.7E-15 1.9E-19 164.1 3.1 66 305-379 177-242 (282)
433 2xdw_A Prolyl endopeptidase; a 99.5 5.4E-12 1.9E-16 158.2 29.3 243 778-1039 123-416 (710)
434 2xdw_A Prolyl endopeptidase; a 99.5 1.6E-11 5.4E-16 154.1 33.4 241 827-1091 123-412 (710)
435 2bkl_A Prolyl endopeptidase; m 99.5 1.4E-12 4.8E-17 163.2 22.6 246 777-1040 118-400 (695)
436 2gop_A Trilobed protease; beta 99.5 1E-11 3.5E-16 140.4 27.2 223 780-1036 59-330 (347)
437 3e5z_A Putative gluconolactona 99.5 1.9E-11 6.6E-16 135.5 28.8 234 778-1036 26-285 (296)
438 3azo_A Aminopeptidase; POP fam 99.5 3.5E-12 1.2E-16 158.1 24.9 251 825-1091 20-321 (662)
439 3e5z_A Putative gluconolactona 99.5 3E-11 1E-15 133.9 30.0 229 826-1087 25-281 (296)
440 3no2_A Uncharacterized protein 99.4 3.3E-11 1.1E-15 133.2 27.4 215 841-1080 5-230 (276)
441 3dsm_A Uncharacterized protein 99.4 7E-11 2.4E-15 133.7 29.3 261 800-1091 16-300 (328)
442 1rwi_B Serine/threonine-protei 99.4 2.6E-11 8.9E-16 131.8 24.1 238 781-1039 25-266 (270)
443 3dsm_A Uncharacterized protein 99.4 8.5E-11 2.9E-15 133.1 29.1 272 753-1047 16-311 (328)
444 1rwi_B Serine/threonine-protei 99.4 5.4E-11 1.9E-15 129.3 26.2 234 830-1091 25-262 (270)
445 2bkl_A Prolyl endopeptidase; m 99.4 1.5E-11 5E-16 154.0 24.3 237 827-1091 119-395 (695)
446 1qks_A Cytochrome CD1 nitrite 99.4 3.7E-10 1.3E-14 137.3 35.8 269 789-1091 165-475 (567)
447 2qc5_A Streptogramin B lactona 99.4 1.5E-09 5.2E-14 119.2 37.8 278 776-1090 16-297 (300)
448 3c5m_A Oligogalacturonate lyas 99.4 3.7E-12 1.3E-16 146.3 17.0 230 830-1091 37-327 (396)
449 1yr2_A Prolyl oligopeptidase; 99.4 5.3E-11 1.8E-15 150.1 27.4 238 829-1091 163-439 (741)
450 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 4.5E-10 1.5E-14 124.8 29.3 243 780-1037 18-299 (314)
451 2mad_H Methylamine dehydrogena 99.3 1.8E-09 6.2E-14 124.6 35.1 267 788-1091 29-348 (373)
452 2z2n_A Virginiamycin B lyase; 99.3 3.3E-09 1.1E-13 116.4 34.0 235 828-1091 14-253 (299)
453 1yr2_A Prolyl oligopeptidase; 99.3 9.1E-11 3.1E-15 147.9 23.5 242 778-1039 161-443 (741)
454 1xip_A Nucleoporin NUP159; bet 99.3 1.3E-09 4.3E-14 125.7 28.7 178 781-974 39-231 (388)
455 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 2.9E-09 9.9E-14 118.2 29.9 239 828-1091 17-297 (314)
456 3no2_A Uncharacterized protein 99.2 1.6E-09 5.6E-14 119.6 27.4 231 790-1045 4-260 (276)
457 3sjl_D Methylamine dehydrogena 99.2 2.2E-09 7.4E-14 123.3 28.1 270 787-1091 40-361 (386)
458 3hrp_A Uncharacterized protein 99.2 5.6E-09 1.9E-13 122.0 30.0 247 829-1091 131-408 (409)
459 1zth_A RIO1 serine protein kin 99.2 7.5E-12 2.6E-16 137.0 4.1 70 305-380 145-220 (258)
460 3hrp_A Uncharacterized protein 99.2 5.1E-09 1.7E-13 122.4 28.0 232 780-1035 131-408 (409)
461 1xip_A Nucleoporin NUP159; bet 99.1 6.2E-10 2.1E-14 128.3 18.2 177 873-1079 39-230 (388)
462 2qc5_A Streptogramin B lactona 99.1 5.9E-08 2E-12 106.3 32.9 234 828-1090 19-257 (300)
463 2mad_H Methylamine dehydrogena 99.1 9E-08 3.1E-12 110.4 35.6 262 755-1043 48-356 (373)
464 3g4e_A Regucalcin; six bladed 99.1 3.8E-08 1.3E-12 109.3 31.0 226 779-1025 12-260 (297)
465 2ghs_A AGR_C_1268P; regucalcin 99.1 5.2E-08 1.8E-12 109.9 31.3 221 782-1026 51-291 (326)
466 3c75_H MADH, methylamine dehyd 99.1 7.6E-09 2.6E-13 120.8 24.7 255 801-1091 99-400 (426)
467 3g4e_A Regucalcin; six bladed 99.1 5.7E-08 2E-12 107.9 29.8 226 830-1081 14-260 (297)
468 3iuj_A Prolyl endopeptidase; h 99.1 1.2E-08 4.2E-13 127.4 27.0 239 827-1091 127-403 (693)
469 3iuj_A Prolyl endopeptidase; h 99.0 8.6E-09 2.9E-13 128.8 24.1 240 777-1039 126-407 (693)
470 2qe8_A Uncharacterized protein 99.0 6.3E-09 2.2E-13 118.3 20.8 270 780-1083 17-311 (343)
471 3sjl_D Methylamine dehydrogena 99.0 5.3E-08 1.8E-12 111.8 27.6 265 753-1046 58-372 (386)
472 2ghs_A AGR_C_1268P; regucalcin 99.0 3E-07 1E-11 103.7 32.8 223 831-1081 51-290 (326)
473 4gyi_A RIO2 kinase; protein ki 99.0 2.7E-11 9.4E-16 138.7 -0.6 68 304-378 187-264 (397)
474 3dr2_A Exported gluconolactona 99.0 8.5E-08 2.9E-12 106.8 26.1 225 778-1028 43-298 (305)
475 3dr2_A Exported gluconolactona 98.9 2.2E-07 7.4E-12 103.5 26.9 230 827-1088 43-302 (305)
476 1mda_H Methylamine dehydrogena 98.9 5.7E-08 1.9E-12 111.5 19.9 248 802-1091 47-344 (368)
477 3c75_H MADH, methylamine dehyd 98.8 5.9E-07 2E-11 104.8 26.3 263 754-1044 99-409 (426)
478 3q7m_A Lipoprotein YFGL, BAMB; 98.8 8.9E-06 3E-10 93.0 34.6 257 790-1090 102-375 (376)
479 3q7m_A Lipoprotein YFGL, BAMB; 98.7 3.4E-06 1.2E-10 96.4 29.8 262 791-1091 53-335 (376)
480 1kb0_A Quinohemoprotein alcoho 98.7 1.4E-06 4.8E-11 108.4 28.1 261 790-1079 127-536 (677)
481 1kb0_A Quinohemoprotein alcoho 98.7 9.5E-07 3.3E-11 109.8 26.4 224 841-1091 128-505 (677)
482 2qe8_A Uncharacterized protein 98.7 8.1E-08 2.8E-12 109.1 15.1 231 829-1091 17-276 (343)
483 1npe_A Nidogen, entactin; glyc 98.7 1.4E-05 4.6E-10 86.9 31.5 257 792-1075 2-263 (267)
484 1yiq_A Quinohemoprotein alcoho 98.7 1.8E-06 6.2E-11 107.6 27.3 259 791-1078 121-533 (689)
485 2hz6_A Endoplasmic reticulum t 98.7 6.8E-09 2.3E-13 119.5 4.9 186 841-1046 9-201 (369)
486 1yiq_A Quinohemoprotein alcoho 98.6 3.3E-06 1.1E-10 105.2 27.0 233 841-1091 121-503 (689)
487 2hz6_A Endoplasmic reticulum t 98.6 4.2E-09 1.4E-13 121.3 0.7 149 883-1046 8-158 (369)
488 1mda_H Methylamine dehydrogena 98.6 6.5E-07 2.2E-11 102.7 17.2 257 755-1047 47-356 (368)
489 3hxj_A Pyrrolo-quinoline quino 98.6 2E-06 6.7E-11 95.9 20.5 262 779-1090 59-321 (330)
490 2ece_A 462AA long hypothetical 98.6 1.9E-05 6.4E-10 91.5 28.2 233 838-1081 93-399 (462)
491 2iwa_A Glutamine cyclotransfer 98.5 2.9E-05 1E-09 84.5 25.4 214 862-1091 10-235 (266)
492 2ece_A 462AA long hypothetical 98.5 3.5E-05 1.2E-09 89.3 27.0 227 789-1025 93-399 (462)
493 3nol_A Glutamine cyclotransfer 98.4 4.5E-05 1.5E-09 82.3 24.8 203 863-1082 33-244 (262)
494 1npe_A Nidogen, entactin; glyc 98.4 0.00016 5.3E-09 78.4 28.4 220 781-1019 37-263 (267)
495 3mbr_X Glutamine cyclotransfer 98.3 0.00016 5.5E-09 77.3 25.8 205 862-1082 10-223 (243)
496 1fwx_A Nitrous oxide reductase 98.3 1.8E-05 6.1E-10 94.7 19.9 241 789-1039 99-433 (595)
497 4a2l_A BT_4663, two-component 98.3 0.00094 3.2E-08 84.4 37.3 272 782-1090 175-477 (795)
498 2iwa_A Glutamine cyclotransfer 98.3 8.6E-05 2.9E-09 80.8 23.2 193 831-1037 23-237 (266)
499 1kv9_A Type II quinohemoprotei 98.3 7.5E-05 2.6E-09 92.6 25.6 232 841-1091 117-486 (668)
500 3hxj_A Pyrrolo-quinoline quino 98.2 4.6E-05 1.6E-09 84.6 20.9 216 791-1036 107-323 (330)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-40 Score=390.69 Aligned_cols=284 Identities=18% Similarity=0.290 Sum_probs=258.9
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001366 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1092)
Q Consensus 775 l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~ 854 (1092)
+.+|..+|++++|+|++.+||+|+.|++|+|||+.+. .......+|...|.+++|+|+ +.+|++|+.||+|+
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~-------~~~~~l~~h~~~V~~v~~~~~-~~~l~sgs~D~~i~ 175 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-------DFERTLKGHTDSVQDISFDHS-GKLLASCSADMTIK 175 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTC-------CCCEEECCCSSCEEEEEECTT-SSEEEEEETTSCCC
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-------cEEEEEeccCCcEEEEEEcCC-CCEEEEEeCCCeEE
Confidence 5689999999999999999999999999999998752 223455679999999999998 88999999999999
Q ss_pred EEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEE
Q 001366 855 LWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGS 933 (1092)
Q Consensus 855 IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs 933 (1092)
|||+.+++++..+.+|...|++++|+| ++..|++|+.|++|++||++++.++.++. |...|.++.|+|++. +|++|+
T Consensus 176 iwd~~~~~~~~~~~~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~-~l~s~s 253 (410)
T 1vyh_C 176 LWDFQGFECIRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCS 253 (410)
T ss_dssp EEETTSSCEEECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS-EEEEEE
T ss_pred EEeCCCCceeEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCC-EEEEEc
Confidence 999999999999999999999999999 88999999999999999999999999887 567899999999985 999999
Q ss_pred CCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC---------------------CCEEEEEECCCeEEEEEcCCCCCCC
Q 001366 934 ADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD---------------------SGTLVTASTDNKLKLWDLKRTSHTG 992 (1092)
Q Consensus 934 ~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~---------------------~~~L~Sgs~Dg~I~vWDl~~~~~~~ 992 (1092)
.|+.|++||+++.. ....+.+|...|.+++|++ +.+|++|+.|++|++||++
T Consensus 254 ~D~~v~vwd~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~------ 326 (410)
T 1vyh_C 254 NDQTVRVWVVATKE-CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS------ 326 (410)
T ss_dssp TTSCEEEEETTTCC-EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT------
T ss_pred CCCeEEEEECCCCc-eeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECC------
Confidence 99999999999875 4567889999999999985 5689999999999999998
Q ss_pred CCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeC
Q 001366 993 PSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRR 1072 (1092)
Q Consensus 993 ~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~sp 1072 (1092)
.+.++.++.+|...|++++|+|+|.+|++|+.|+.|++||...++.+..+ .+|...|++++|+|
T Consensus 327 --~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~--------------~~h~~~v~~l~~~~ 390 (410)
T 1vyh_C 327 --TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--------------NAHEHFVTSLDFHK 390 (410)
T ss_dssp --TTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEE--------------ECCSSCEEEEEECS
T ss_pred --CCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEE--------------cCCCCcEEEEEEcC
Confidence 46788899999999999999999999999999999999999887766554 36788999999999
Q ss_pred CCCEEEEEecCCeEEEEEc
Q 001366 1073 RSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1073 d~~~Lasgs~DG~V~vW~l 1091 (1092)
++.+|++|+.||.|+||++
T Consensus 391 ~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 391 TAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp SSSCEEEEETTSEEEEEC-
T ss_pred CCCEEEEEeCCCcEEEEeC
Confidence 9999999999999999985
No 2
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.4e-43 Score=396.02 Aligned_cols=270 Identities=23% Similarity=0.300 Sum_probs=193.0
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.||+|+||++.. ...+..+|.|+....+.........++..++...+||||+.+++........... ....+..
T Consensus 15 ~G~fg~V~~a~~----~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~-~~~~~~~- 88 (299)
T 4g31_A 15 RGGFGVVFEAKN----KVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL-QPSSPKV- 88 (299)
T ss_dssp ECC--EEEEEEE----TTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----------CE-
T ss_pred cCCCeEEEEEEE----CCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc-cccCCCc-
Confidence 348999999975 2235667776553333333334556788899999999999988876543321100 0000000
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCC--CCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHK--GKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~--~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
.-..+||||+||+|.++|+..+.. .+...++.|++||++||+|||++||+||||||+||||+.++.+||+|||+|+
T Consensus 89 --~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~ 166 (299)
T 4g31_A 89 --YLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVT 166 (299)
T ss_dssp --EEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC-
T ss_pred --EEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccce
Confidence 001489999999999999876542 3445688999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+.........
T Consensus 167 ~~~~~~~~~~~--------------------------------------------------------------------- 177 (299)
T 4g31_A 167 AMDQDEEEQTV--------------------------------------------------------------------- 177 (299)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecCCCcccccc---------------------------------------------------------------------
Confidence 76521110000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcHHHHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~~~~~~ 537 (1092)
..........+..+||++|||||++.+..|+.++|||||||+||||++||.+..+...
T Consensus 178 ----------------------~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~Pf~~~~~~~~ 235 (299)
T 4g31_A 178 ----------------------LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVR 235 (299)
T ss_dssp ------------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH
T ss_pred ----------------------ccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHccCCCCccHHHH
Confidence 0000001122367899999999999999999999999999999999999988877777
Q ss_pred HHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 538 AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 538 ~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
.+..++....|+.+...+|.+.+||.+||++||.+|||+.|||+||||.+.
T Consensus 236 ~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 236 TLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp HHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred HHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 777777777777777778889999999999999999999999999999865
No 3
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.2e-43 Score=397.60 Aligned_cols=246 Identities=17% Similarity=0.203 Sum_probs=195.1
Q ss_pred hhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 218 TTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 218 ~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
-..|++|+||++.. ...++.+|.|+..-.. ........++..++...+||||+.+++....+...++
T Consensus 82 iG~G~fG~V~~a~~----~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~i-------- 148 (346)
T 4fih_A 82 IGEGSTGIVCIATV----RSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV-------- 148 (346)
T ss_dssp EEECSSCEEEEEEE----TTTCCEEEEEEEEGGG-CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEE--------
T ss_pred eecCcCeEEEEEEE----CCCCCEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE--------
Confidence 44568999999986 3346677776653222 2223445678888999999999999888776655553
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
+||||+||+|.++|... .+++.+++.|++||+.||+|||++|||||||||+||||+.+|.+||+|||+++
T Consensus 149 --------vmEy~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~ 218 (346)
T 4fih_A 149 --------VMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 218 (346)
T ss_dssp --------EECCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred --------EEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCce
Confidence 89999999999999764 47888999999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+...
T Consensus 219 ~~~~~--------------------------------------------------------------------------- 223 (346)
T 4fih_A 219 QVSKE--------------------------------------------------------------------------- 223 (346)
T ss_dssp ECCSS---------------------------------------------------------------------------
T ss_pred ecCCC---------------------------------------------------------------------------
Confidence 75410
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
....++.+||++|||||++.+..|+.++|||||||+||||++| |.+...
T Consensus 224 ----------------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~ 275 (346)
T 4fih_A 224 ----------------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 275 (346)
T ss_dssp ----------------------------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred ----------------------------CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH
Confidence 0112267899999999999999999999999999999999986 554443
Q ss_pred HHHHHHhccccCC--CCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 535 LAAAMSDLRDRIL--PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 535 ~~~~~~~~~~~~~--p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
.... ..+..... .+.+...++++.+||.+||.+||.+|||+.|+|+||||.+...
T Consensus 276 ~~~~-~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~ 332 (346)
T 4fih_A 276 LKAM-KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 332 (346)
T ss_dssp HHHH-HHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHHH-HHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCC
Confidence 3333 33332221 2334456899999999999999999999999999999987543
No 4
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=5.8e-43 Score=398.44 Aligned_cols=251 Identities=18% Similarity=0.188 Sum_probs=197.3
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.++ |+|+||++.. ...++.+|.|+..-.... .......++..++...+||||+.+++....+...++
T Consensus 26 Y~~~~~lG~G~fg~V~~a~~----~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yi- 100 (350)
T 4b9d_A 26 YVRLQKIGEGSFGKAILVKS----TEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYI- 100 (350)
T ss_dssp EEEEEEC------CEEEEEE----TTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE-
T ss_pred eEEeEEEecCCCeEEEEEEE----CCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE-
Confidence 55555554 7999999975 233667777765332222 223445678888999999999999888776655553
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
+||||+||+|.++|... +..+++.+++.|++||+.||+|||++|||||||||+||||+.+|.+|
T Consensus 101 ---------------VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vK 165 (350)
T 4b9d_A 101 ---------------VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQ 165 (350)
T ss_dssp ---------------EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEE
T ss_pred ---------------EEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEE
Confidence 89999999999999754 44578889999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+++.+....
T Consensus 166 l~DFGla~~~~~~~------------------------------------------------------------------ 179 (350)
T 4b9d_A 166 LGDFGIARVLNSTV------------------------------------------------------------------ 179 (350)
T ss_dssp ECSTTEESCCCHHH------------------------------------------------------------------
T ss_pred EcccccceeecCCc------------------------------------------------------------------
Confidence 99999998754100
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC-
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~- 528 (1092)
...+..+||++|||||++.+..|+.++|||||||+||||+++
T Consensus 180 -------------------------------------~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~ 222 (350)
T 4b9d_A 180 -------------------------------------ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222 (350)
T ss_dssp -------------------------------------HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred -------------------------------------ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 011256899999999999999999999999999999999985
Q ss_pred --CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|.+..........+. ...|+.....++++.+||.+||++||.+|||+.|+|+||||...
T Consensus 223 ~PF~~~~~~~~~~~i~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 223 HAFEAGSMKNLVLKIIS-GSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp CSCCCSSHHHHHHHHHH-TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred CCCCCcCHHHHHHHHHc-CCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 666555444444443 34455556678999999999999999999999999999999753
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=365.97 Aligned_cols=287 Identities=18% Similarity=0.269 Sum_probs=255.8
Q ss_pred eecCCCCCEEEEEEcCC----CCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEEC
Q 001366 774 EFNNSANVICSISFDRD----EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADY 849 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspd----g~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~ 849 (1092)
.+.+|.+.|++++|+|+ +.+||||+.|++|+||++.... ........+|...|.+++|+++ +.++++++.
T Consensus 27 ~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~-----~~~~~~l~gh~~~v~~~~~~~~-~~~l~s~s~ 100 (321)
T 3ow8_A 27 QEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDER-----LDLQWSLEGHQLGVVSVDISHT-LPIAASSSL 100 (321)
T ss_dssp ETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTE-----EEEEEEECCCSSCEEEEEECSS-SSEEEEEET
T ss_pred ecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCC-----eeeeeeeccCCCCEEEEEECCC-CCEEEEEeC
Confidence 45689999999999974 6799999999999999986411 1122235679999999999998 889999999
Q ss_pred CCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeE
Q 001366 850 DGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHL 928 (1092)
Q Consensus 850 DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~ 928 (1092)
|++|++||+.+++.+..+..|...+++++|+| ++.+|++|+.|+.|++||+++++....+. +...|.+++|+|++. +
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~ 178 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK-Y 178 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTCCCCEEECT-TSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSS-E
T ss_pred CCcEEEEECCCCCEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCC-E
Confidence 99999999999999999999999999999999 89999999999999999999999888877 466799999999995 9
Q ss_pred EEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCC
Q 001366 929 LAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTN 1007 (1092)
Q Consensus 929 latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~ 1007 (1092)
|++|+.|+.|++||+++++ .+..+.+|...|.+++|+ ++.+|++|+.|++|++||++ ...+..++.+|..
T Consensus 179 lasg~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~--------~~~~~~~~~~h~~ 249 (321)
T 3ow8_A 179 LASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ--------HANLAGTLSGHAS 249 (321)
T ss_dssp EEEEETTSCEEEEETTTTE-EEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETT--------TCCEEEEECCCSS
T ss_pred EEEEcCCCeEEEEECCCCc-EEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECC--------CcceeEEEcCCCC
Confidence 9999999999999999875 467889999999999999 66789999999999999998 3567788999999
Q ss_pred CeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEE
Q 001366 1008 EKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIK 1087 (1092)
Q Consensus 1008 ~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~ 1087 (1092)
.|++++|+|++.+|++|+.|++|+|||+.+++++..+ .+|...|++++|+|++.+|++++.||.|+
T Consensus 250 ~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~--------------~~h~~~v~~v~~s~~g~~l~s~~~d~~i~ 315 (321)
T 3ow8_A 250 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF--------------FDHQDQVWGVKYNGNGSKIVSVGDDQEIH 315 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE--------------CCCSSCEEEEEECTTSSEEEEEETTCCEE
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEE--------------cCCCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 9999999999999999999999999999988877654 35788999999999999999999999999
Q ss_pred EEEc
Q 001366 1088 VLQM 1091 (1092)
Q Consensus 1088 vW~l 1091 (1092)
||++
T Consensus 316 vwd~ 319 (321)
T 3ow8_A 316 IYDC 319 (321)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9985
No 6
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.9e-42 Score=399.63 Aligned_cols=247 Identities=16% Similarity=0.164 Sum_probs=195.7
Q ss_pred hhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 218 TTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 218 ~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
-..|++|+||++.. ...++.+|.|+..-.. ........++..++...+||||+.+++....+...+
T Consensus 159 iG~G~fG~V~~a~~----~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~--------- 224 (423)
T 4fie_A 159 IGEGSTGIVCIATV----RSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELW--------- 224 (423)
T ss_dssp EEECSSCEEEEEEE----TTTCCEEEEEEEESTT-CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEE---------
T ss_pred eccCcCcEEEEEEE----CCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEE---------
Confidence 44558999999986 3346677776653222 223344567888899999999999988877655555
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++||||+||+|.++|+.. .+++.++..|++||+.||+|||++|||||||||+||||+.+|.+||+|||+++
T Consensus 225 -------iVmEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~ 295 (423)
T 4fie_A 225 -------VVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 295 (423)
T ss_dssp -------EEEECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCE
T ss_pred -------EEEeCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccce
Confidence 389999999999999765 47888999999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.+...
T Consensus 296 ~~~~~--------------------------------------------------------------------------- 300 (423)
T 4fie_A 296 QVSKE--------------------------------------------------------------------------- 300 (423)
T ss_dssp ECCSS---------------------------------------------------------------------------
T ss_pred ECCCC---------------------------------------------------------------------------
Confidence 75410
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
....++.+||++|||||++.+..|+.++|||||||+||||++| |.+...
T Consensus 301 ----------------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~ 352 (423)
T 4fie_A 301 ----------------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 352 (423)
T ss_dssp ----------------------------CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred ----------------------------CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH
Confidence 0012267899999999999999999999999999999999986 554444
Q ss_pred HHHHHHhccccC-CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 535 LAAAMSDLRDRI-LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 535 ~~~~~~~~~~~~-~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
............ ..+.+...++.+.+||.+||.+||.+|||+.|||+||||.....
T Consensus 353 ~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~ 409 (423)
T 4fie_A 353 LKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 409 (423)
T ss_dssp HHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence 333332222211 12334567899999999999999999999999999999987543
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.5e-38 Score=357.53 Aligned_cols=286 Identities=21% Similarity=0.340 Sum_probs=248.6
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.|.+|.+.|++++|+|++++||+|+.|++|+|||+.+. ........|..+|.+++|+|+ +++|++|+.|++|
T Consensus 8 ~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~-------~~~~~~~~~~~~v~~~~~~~~-~~~l~s~s~d~~i 79 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ-------VEVRSIQVTETPVRAGKFIAR-KNWIIVGSDDFRI 79 (304)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-------EEEEEEECCSSCEEEEEEEGG-GTEEEEEETTSEE
T ss_pred eecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC-------ceeEEeeccCCcEEEEEEeCC-CCEEEEECCCCEE
Confidence 36689999999999999999999999999999998752 222344568899999999998 8999999999999
Q ss_pred EEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCcee-eeEe-cCCceEEEEEccCCCeEEEE
Q 001366 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSL-ATIK-NIANVCCVQFSAHSSHLLAF 931 (1092)
Q Consensus 854 ~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l-~~l~-~~~~V~sl~fsp~~~~~lat 931 (1092)
++||+.+++.+..+.+|...|++++|+| ++.+|++|+.|++|++||++++..+ ..+. |...|.+++|+|.+..+|++
T Consensus 80 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s 158 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (304)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEE
T ss_pred EEEECCCCcEEEEEeCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEE
Confidence 9999999999999999999999999999 8899999999999999999987544 4555 67789999999965569999
Q ss_pred EECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc---CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCC
Q 001366 932 GSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL---DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNE 1008 (1092)
Q Consensus 932 gs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs---~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~ 1008 (1092)
|+.|+.|++||+++.........+|...|..+.|+ ++.+|++|+.|++|++||++ .+.++.++.+|...
T Consensus 159 gs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~--------~~~~~~~~~~h~~~ 230 (304)
T 2ynn_A 159 GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ--------TKSCVATLEGHMSN 230 (304)
T ss_dssp EETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETT--------TTEEEEEEECCSSC
T ss_pred EeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCC--------CCccceeeCCCCCC
Confidence 99999999999998776666666788899999997 35689999999999999998 46788999999999
Q ss_pred eEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCC--EEEEEecCCeE
Q 001366 1009 KNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSD--MVVAANSSGCI 1086 (1092)
Q Consensus 1009 V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~--~Lasgs~DG~V 1086 (1092)
|.+++|+|++.+|++|+.|++|++||..+++.+..+. .|...|++++|+|++. +|++|+.|| +
T Consensus 231 v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~asg~~~g-~ 295 (304)
T 2ynn_A 231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN--------------VGLERSWCIATHPTGRKNYIASGFDNG-F 295 (304)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC--------------CSSSSEEEEEECTTCGGGCEEEEETTE-E
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeecc--------------CCCccEEEEEECCCCCceEEEEecCCc-e
Confidence 9999999999999999999999999999888776653 4567899999999875 577776555 5
Q ss_pred EEEEc
Q 001366 1087 KVLQM 1091 (1092)
Q Consensus 1087 ~vW~l 1091 (1092)
.+|++
T Consensus 296 ~~~~~ 300 (304)
T 2ynn_A 296 TVLSL 300 (304)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 56654
No 8
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.1e-42 Score=384.14 Aligned_cols=251 Identities=14% Similarity=0.097 Sum_probs=190.2
Q ss_pred HHHhhhccccceeeeCCCCCccccccccccccccccccCch-hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCcc
Q 001366 214 FFVKTTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGAR 292 (1092)
Q Consensus 214 ~~~~~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (1092)
|..+-..||+|+||+|... ..+..+|.|+........ ....-.++..++...+||||+.+++.........
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~----~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~---- 101 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDT----ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK---- 101 (290)
T ss_dssp EEEEEEECSSEEEEEEEET----TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTE----
T ss_pred eeeEEecCcCcEEEEEEEC----CCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCC----
Confidence 3335667799999999762 235566665543322222 2334457788899999999999877643211000
Q ss_pred CCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcC--ccccCCCCCCeEEc-cCCcEE
Q 001366 293 TGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG--VTFLDLKPSSFKLL-QSNQVK 369 (1092)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~g--IvHrDLKP~Nill~-~~~~vk 369 (1092)
. .. ..+||||+||+|.++|++.+ .+++.+++.|++||+.||+|||++| ||||||||+||||+ .++.+|
T Consensus 102 -~--~~-----~lvmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vK 172 (290)
T 3fpq_A 102 -K--CI-----VLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVK 172 (290)
T ss_dssp -E--EE-----EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEE
T ss_pred -c--EE-----EEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEE
Confidence 0 00 13899999999999998764 5777799999999999999999999 99999999999997 478999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+|+....
T Consensus 173 l~DFGla~~~~~-------------------------------------------------------------------- 184 (290)
T 3fpq_A 173 IGDLGLATLKRA-------------------------------------------------------------------- 184 (290)
T ss_dssp ECCTTGGGGCCT--------------------------------------------------------------------
T ss_pred EEeCcCCEeCCC--------------------------------------------------------------------
Confidence 999999975220
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC-
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~- 528 (1092)
...++.+||++|||||++.+ .|+.++|||||||+||||+++
T Consensus 185 -------------------------------------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~ 226 (290)
T 3fpq_A 185 -------------------------------------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSE 226 (290)
T ss_dssp -------------------------------------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSS
T ss_pred -------------------------------------CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCC
Confidence 00125689999999999875 699999999999999999986
Q ss_pred --CCcHHHHHHHHHhccccCCCCCCC-CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPSFL-SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
|.........+..+.....|+.+. ..++++.+||.+||++||.+|||++|+|+||||.+
T Consensus 227 ~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 227 YPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp CTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred CCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 544444555555665555554433 45688999999999999999999999999999975
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.1e-42 Score=387.65 Aligned_cols=252 Identities=15% Similarity=0.130 Sum_probs=197.6
Q ss_pred hHHHhhhcc--ccceeeeCCCCCcccccccccccccccccc--CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTT--MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
.|.+.+.++ |+|+||++.. ...++.+|.|+..-.. .........++..++...+||||+.+++....+...+
T Consensus 33 dy~i~~~lG~G~fg~V~~a~~----~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~y 108 (311)
T 4aw0_A 33 DFKFGKILGEGSFSTVVLARE----LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLY 108 (311)
T ss_dssp GEEEEEEEEEETTEEEEEEEE----TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEEEEecccCeEEEEEEE----CCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 466666665 7999999986 3346677777653211 1122344567788899999999999988877655555
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
+ +||||+||+|.++|+..+ .+++.+++.|++||+.||+|||++||+||||||+||||+.++.+
T Consensus 109 i----------------vmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~v 171 (311)
T 4aw0_A 109 F----------------GLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI 171 (311)
T ss_dssp E----------------EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCE
T ss_pred E----------------EEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCE
Confidence 3 899999999999998765 47777999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+|+.+....
T Consensus 172 Kl~DFGla~~~~~~~----------------------------------------------------------------- 186 (311)
T 4aw0_A 172 QITDFGTAKVLSPES----------------------------------------------------------------- 186 (311)
T ss_dssp EECCCTTCEECCTTT-----------------------------------------------------------------
T ss_pred EEEEcCCceecCCCC-----------------------------------------------------------------
Confidence 999999998754100
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~ 528 (1092)
......+.+||++|||||++.+..|+.++|||||||+||||++|
T Consensus 187 ------------------------------------~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G 230 (311)
T 4aw0_A 187 ------------------------------------KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230 (311)
T ss_dssp ------------------------------------TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHS
T ss_pred ------------------------------------CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhC
Confidence 00112267899999999999999999999999999999999985
Q ss_pred ---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH------Hhhhhhhhhh
Q 001366 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE------ILQSEVTNEF 588 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~e------iL~~~~~~~~ 588 (1092)
|.+..........+......| ...++++.+||.+||.+||.+|||+.| |++||||.+.
T Consensus 231 ~~PF~~~~~~~~~~~i~~~~~~~p--~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i 297 (311)
T 4aw0_A 231 LPPFRAGNEGLIFAKIIKLEYDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297 (311)
T ss_dssp SCSSCCSSHHHHHHHHHHTCCCCC--TTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred CCCCCCCCHHHHHHHHHcCCCCCC--cccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence 665554444444444332222 245889999999999999999999987 5889999765
No 10
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.1e-42 Score=386.07 Aligned_cols=254 Identities=19% Similarity=0.225 Sum_probs=192.0
Q ss_pred hhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 212 ~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
++|.+.+.++ |+|+||++..... ...++.+|.|+....... .+.....++..++...+||||+.+++....+...+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~-~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISG-SDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSS-TTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccC-CCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 4677777665 7999999864210 122455666665322211 12223455777888999999999988877655555
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
+ +||||+||+|.++|+..+ .+++.+++.|++||+.||+|||++||+||||||+|||++.+|.+
T Consensus 103 i----------------vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~v 165 (304)
T 3ubd_A 103 L----------------ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHI 165 (304)
T ss_dssp E----------------EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCE
T ss_pred E----------------EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCE
Confidence 3 899999999999998765 47777999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+|+...+..
T Consensus 166 Kl~DFGla~~~~~~~----------------------------------------------------------------- 180 (304)
T 3ubd_A 166 KLTDFGLSKESIDHE----------------------------------------------------------------- 180 (304)
T ss_dssp EEESSEEEEC----------------------------------------------------------------------
T ss_pred EecccccceeccCCC-----------------------------------------------------------------
Confidence 999999998643100
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~ 528 (1092)
....+.+||++|||||++.+..|+.++|||||||+||||++|
T Consensus 181 --------------------------------------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG 222 (304)
T 3ubd_A 181 --------------------------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222 (304)
T ss_dssp --------------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHS
T ss_pred --------------------------------------ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhC
Confidence 011256899999999999999999999999999999999985
Q ss_pred ---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH-----HHHhhhhhhhhh
Q 001366 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQSEVTNEF 588 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa-----~eiL~~~~~~~~ 588 (1092)
|.+..........++.....| ...++++.+||.+||++||.+|||+ +||++||||.+.
T Consensus 223 ~~PF~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 223 TLPFQGKDRKETMTMILKAKLGMP--QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp SCSSCCSSHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred CCCCCCcCHHHHHHHHHcCCCCCC--CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence 665554444444444332222 3458999999999999999999985 799999999874
No 11
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.1e-38 Score=358.44 Aligned_cols=283 Identities=16% Similarity=0.234 Sum_probs=248.1
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.+.+|...|++++|+|++++|++|+.|++|+|||+... ........|...|.+++|+|+ +.+|++|+.|++|
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~-------~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~~d~~v 121 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTT-------NKVHAIPLRSSWVMTCAYAPS-GNYVACGGLDNIC 121 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC-------CEEEEEECSSSCEEEEEECTT-SSEEEEEETTCEE
T ss_pred eecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-------CcceEeecCCccEEEEEECCC-CCEEEEEeCCCeE
Confidence 46799999999999999999999999999999998652 122334568889999999998 8999999999999
Q ss_pred EEEECCCC----ceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeE
Q 001366 854 KLWDACTG----QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHL 928 (1092)
Q Consensus 854 ~IWD~~tg----~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~ 928 (1092)
++||+.++ .....+.+|...|.++.|++ + ..+++++.|++|++||+++++++.++. |...|.+++|+|++. +
T Consensus 122 ~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~-~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~ 198 (340)
T 1got_B 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-D-NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR-L 198 (340)
T ss_dssp EEEETTTCSBSCEEEEEEECCSSCEEEEEEEE-T-TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-E
T ss_pred EEEECccCCCcceeEEEecCCCccEEEEEECC-C-CcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCC-E
Confidence 99999875 35677889999999999998 4 459999999999999999999998887 678899999999985 9
Q ss_pred EEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEc--CC
Q 001366 929 LAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFS--GH 1005 (1092)
Q Consensus 929 latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~--~h 1005 (1092)
|++|+.|+.|++||++++. ....+.+|...|.+++|+ ++.+|++|+.|++|++||++. ...+..+. .+
T Consensus 199 l~sg~~d~~v~~wd~~~~~-~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~--------~~~~~~~~~~~~ 269 (340)
T 1got_B 199 FVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA--------DQELMTYSHDNI 269 (340)
T ss_dssp EEEEETTSCEEEEETTTCS-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--------TEEEEEECCTTC
T ss_pred EEEEeCCCcEEEEECCCCe-eEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC--------CcEEEEEccCCc
Confidence 9999999999999999875 467889999999999999 677899999999999999983 34444544 23
Q ss_pred CCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCe
Q 001366 1006 TNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGC 1085 (1092)
Q Consensus 1006 ~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~ 1085 (1092)
...|++++|+|+|.+|++|+.|+.|++||...+..+..+ .+|...|++++|+|++.+|+||+.||.
T Consensus 270 ~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~--------------~~h~~~v~~~~~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 270 ICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVL--------------AGHDNRVSCLGVTDDGMAVATGSWDSF 335 (340)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE--------------ECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred ccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEe--------------ecCCCcEEEEEEcCCCCEEEEEcCCcc
Confidence 457999999999999999999999999999887766544 467889999999999999999999999
Q ss_pred EEEEE
Q 001366 1086 IKVLQ 1090 (1092)
Q Consensus 1086 V~vW~ 1090 (1092)
|+||+
T Consensus 336 i~iWd 340 (340)
T 1got_B 336 LKIWN 340 (340)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 99996
No 12
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8.2e-39 Score=367.33 Aligned_cols=288 Identities=17% Similarity=0.239 Sum_probs=237.4
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC----CCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCC
Q 001366 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALF----NDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG 851 (1092)
Q Consensus 776 ~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~----~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dg 851 (1092)
..|...|.+++|+|||++|++++ |+++++||..... ..............+...|.+++|+|+ ..|++|+.||
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~l~~~s~dg 103 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE--RGILVASDSG 103 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT--TEEEEEETTS
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC--CeEEEEECCC
Confidence 35677899999999999999887 7788888732100 000111122334556788999999996 5788999999
Q ss_pred cEEEEECCCCceEEE----eeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCC
Q 001366 852 VVKLWDACTGQTVSH----YIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSS 926 (1092)
Q Consensus 852 tV~IWD~~tg~~i~~----l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~ 926 (1092)
+|+|||+.+++.+.. +.+|...|++|+|+| ++++|++|+.|++|++||+++++++.++. |...|++++|+|++.
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~ 182 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKD 182 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCT
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCC
Confidence 999999999875433 448999999999999 89999999999999999999999999988 678999999999987
Q ss_pred eEEEEEECCCeEEEEEcCCCCcceEEe--cCCCCCeEEEEEc--CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEE
Q 001366 927 HLLAFGSADYRTYCYDLRNARAPWCVL--AGHEKAVSYVKFL--DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTF 1002 (1092)
Q Consensus 927 ~~latgs~Dg~I~vwDlr~~~~~~~~l--~~H~~~V~~v~fs--~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l 1002 (1092)
.+|++|+.|+.|++||+++++. ...+ ..|...+.+++|+ ++.+|++|+.||+|+|||++ .+.++.++
T Consensus 183 ~~l~s~s~D~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~--------~~~~~~~~ 253 (344)
T 4gqb_B 183 SVFLSCSEDNRILLWDTRCPKP-ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK--------STSCVLSS 253 (344)
T ss_dssp TEEEEEETTSCEEEEETTSSSC-EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC--------C--CCEEE
T ss_pred Cceeeeccccccccccccccce-eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC--------CCcEEEEE
Confidence 7999999999999999998764 3443 3566789999998 34578999999999999998 45678899
Q ss_pred cCCCCCeEEEEEecCC-CEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCC-EEEEE
Q 001366 1003 SGHTNEKNFVGLSTAD-GYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSD-MVVAA 1080 (1092)
Q Consensus 1003 ~~h~~~V~~v~~spdg-~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~-~Lasg 1080 (1092)
.+|...|++++|+|++ .+||+||.|++|+|||...++.+. ..+|...|++|+|+|++. +|+||
T Consensus 254 ~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~---------------~~~H~~~V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 254 AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR---------------SQAHRDFVRDATWSPLNHSLLTTV 318 (344)
T ss_dssp ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE---------------ECCCSSCEEEEEECSSSTTEEEEE
T ss_pred cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE---------------EcCCCCCEEEEEEeCCCCeEEEEE
Confidence 9999999999999998 589999999999999998776432 246889999999999886 67799
Q ss_pred ecCCeEEEEEc
Q 001366 1081 NSSGCIKVLQM 1091 (1092)
Q Consensus 1081 s~DG~V~vW~l 1091 (1092)
|.||.|++|++
T Consensus 319 s~D~~v~~w~v 329 (344)
T 4gqb_B 319 GWDHQVVHHVV 329 (344)
T ss_dssp ETTSCEEEEEC
T ss_pred cCCCeEEEEEC
Confidence 99999999986
No 13
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.1e-39 Score=375.18 Aligned_cols=292 Identities=14% Similarity=0.231 Sum_probs=252.2
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.|.+|...|++++|+|++++||+|+.|++|+|||+... ........|...|.+++|+|+ +.+|++|+.|++|
T Consensus 61 ~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~-------~~~~~~~~h~~~v~~~~~s~~-g~~las~~~d~~v 132 (380)
T 3iz6_a 61 TLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTS-------QKTHAIKLHCPWVMECAFAPN-GQSVACGGLDSAC 132 (380)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTT-------EEEEEEECCCTTCCCCEECTT-SSEEEECCSSSCC
T ss_pred cccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-------ccceEEecCCCCEEEEEECCC-CCEEEEeeCCCcE
Confidence 46799999999999999999999999999999998651 223345678999999999998 9999999999999
Q ss_pred EEEECCCCc-------eEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe------cCCceEEEE
Q 001366 854 KLWDACTGQ-------TVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK------NIANVCCVQ 920 (1092)
Q Consensus 854 ~IWD~~tg~-------~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~------~~~~V~sl~ 920 (1092)
+|||+.+.. ....+.+|...|.++.|.|.++..|++|+.|++|++||+++++++..+. |...|.+++
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~ 212 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLS 212 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEE
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEE
Confidence 999987532 3456789999999999999667789999999999999999999888773 567899999
Q ss_pred EccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCcee
Q 001366 921 FSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACS 999 (1092)
Q Consensus 921 fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~ 999 (1092)
|+|.+..+|++|+.|+.|++||++.....+..+.+|...|.+++|+ ++.+|++|+.|++|++||+++ +.++
T Consensus 213 ~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~--------~~~~ 284 (380)
T 3iz6_a 213 INSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT--------GHQL 284 (380)
T ss_dssp ECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT--------TEEE
T ss_pred eecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC--------CcEE
Confidence 9885556999999999999999997666778899999999999999 667899999999999999984 4455
Q ss_pred EEEcCCC-------CCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeC
Q 001366 1000 LTFSGHT-------NEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRR 1072 (1092)
Q Consensus 1000 ~~l~~h~-------~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~sp 1072 (1092)
..+..+. ..|++++|+|+|.+|++|+.||.|++||...++.+.... ....+|...|++++|+|
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~----------~~~~~h~~~v~~l~~s~ 354 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLG----------TLQNSHEGRISCLGLSS 354 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEEC----------CSCSSCCCCCCEEEECS
T ss_pred EEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEe----------cccCCCCCceEEEEECC
Confidence 5555432 348999999999999999999999999998887766542 12357889999999999
Q ss_pred CCCEEEEEecCCeEEEEEc
Q 001366 1073 RSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1073 d~~~Lasgs~DG~V~vW~l 1091 (1092)
++.+|+||+.||.|+||++
T Consensus 355 dg~~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 355 DGSALCTGSWDKNLKIWAF 373 (380)
T ss_dssp SSSEEEEECTTSCEEEEEC
T ss_pred CCCEEEEeeCCCCEEEEec
Confidence 9999999999999999986
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.8e-38 Score=388.65 Aligned_cols=334 Identities=19% Similarity=0.237 Sum_probs=263.1
Q ss_pred hhhccchhhhhhccccccCCCC---cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCC
Q 001366 725 LLRDRENLFLAQQDQEIQNPTD---RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSK 801 (1092)
Q Consensus 725 ~l~~~~~~~~~~~~~~~~~~~~---~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~ 801 (1092)
.+.+|...+..+.+ +|++ .++++.|+++++|+....+... .+.+|...|++++|+|+|++||+|+.|+
T Consensus 142 ~l~gh~~~v~~v~f----~p~~~~~l~s~s~D~~v~lwd~~~~~~~~-----~l~~H~~~V~~v~fspdg~~las~s~D~ 212 (611)
T 1nr0_A 142 NLTGQARAMNSVDF----KPSRPFRIISGSDDNTVAIFEGPPFKFKS-----TFGEHTKFVHSVRYNPDGSLFASTGGDG 212 (611)
T ss_dssp CCCCCSSCEEEEEE----CSSSSCEEEEEETTSCEEEEETTTBEEEE-----EECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eecCCCCCceEEEE----CCCCCeEEEEEeCCCeEEEEECCCCeEee-----eeccccCceEEEEECCCCCEEEEEECCC
Confidence 35566666655543 4543 4588999999999987765543 3668999999999999999999999999
Q ss_pred cEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEE----------------
Q 001366 802 KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVS---------------- 865 (1092)
Q Consensus 802 ~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~---------------- 865 (1092)
+|+|||+.................+|...|.+++|+|+ +.+|+|++.|++|+|||+.+++++.
T Consensus 213 ~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd-g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~ 291 (611)
T 1nr0_A 213 TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD-GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGII 291 (611)
T ss_dssp CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEE
T ss_pred cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC-CCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEE
Confidence 99999976421100000000111268999999999998 8999999999999999998876543
Q ss_pred ---------------------------EeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeE--------
Q 001366 866 ---------------------------HYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATI-------- 910 (1092)
Q Consensus 866 ---------------------------~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l-------- 910 (1092)
.+.+|...|++++|+| ++.+|++++.|++|++||+.++.+...+
T Consensus 292 ~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v 370 (611)
T 1nr0_A 292 WTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMI 370 (611)
T ss_dssp ECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCE
T ss_pred EcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCceeeecccCCcceE
Confidence 3457899999999999 8999999999999999999876543221
Q ss_pred ---------------------------------------------------------------------------ecCCc
Q 001366 911 ---------------------------------------------------------------------------KNIAN 915 (1092)
Q Consensus 911 ---------------------------------------------------------------------------~~~~~ 915 (1092)
.+...
T Consensus 371 ~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~ 450 (611)
T 1nr0_A 371 TGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYN 450 (611)
T ss_dssp EEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSC
T ss_pred EEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCC
Confidence 11234
Q ss_pred eEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcc-eEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCC
Q 001366 916 VCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAP-WCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGP 993 (1092)
Q Consensus 916 V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~-~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~ 993 (1092)
+.+++|+|++. +|++|+.|+.|++||+.+.... ... .+|...|.+|+|+ ++.+|++++.|++|++||+.+.
T Consensus 451 v~~va~spdg~-~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~----- 523 (611)
T 1nr0_A 451 SSCVALSNDKQ-FVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANN----- 523 (611)
T ss_dssp EEEEEECTTSC-EEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGT-----
T ss_pred ceEEEEeCCCC-EEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCC-----
Confidence 67899999995 9999999999999999875421 233 6899999999999 7789999999999999999741
Q ss_pred CCCceeEE--EcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCC-CCCEEEEEE
Q 001366 994 STNACSLT--FSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDN-GLFVSSVCW 1070 (1092)
Q Consensus 994 ~~~~~~~~--l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h-~~~V~sva~ 1070 (1092)
..+... +.+|...|++++|+|+|++||+||.|++|++|++..+..... ....+| ...|++++|
T Consensus 524 --~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~------------~~~~~h~~~~v~~v~f 589 (611)
T 1nr0_A 524 --FELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPI------------IIKGAHAMSSVNSVIW 589 (611)
T ss_dssp --TEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCE------------EETTSSTTSCEEEEEE
T ss_pred --CceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccc------------hhhccCcccCeeEEEE
Confidence 222222 345999999999999999999999999999999987652210 123467 788999999
Q ss_pred eCCCCEEEEEecCCeEEEEEc
Q 001366 1071 RRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1071 spd~~~Lasgs~DG~V~vW~l 1091 (1092)
+|++. |++|+.||+|++|++
T Consensus 590 s~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 590 LNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp EETTE-EEEEETTSCEEEEEC
T ss_pred cCCCE-EEEecCCCCEEEEec
Confidence 99998 999999999999996
No 15
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.2e-38 Score=365.32 Aligned_cols=287 Identities=17% Similarity=0.227 Sum_probs=237.7
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeC------CCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEEC
Q 001366 776 NNSANVICSISFDRDEDHFAAAGV------SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADY 849 (1092)
Q Consensus 776 ~~h~~~V~sl~fspdg~~latgg~------D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~ 849 (1092)
..|...|++++|+|||++||+|+. |++|++|+..... ..........+|...|.+++|+|+ + .+++++.
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~---~~~~~~~~~~~~~~~V~~~~~s~d-~-~~l~~s~ 113 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGA---PNESLCTAGVQTEAGVTDVAWVSE-K-GILVASD 113 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC------CGGGCSEEEECSSCEEEEEEETT-T-EEEEEET
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCC---cceeEecccCCCCCCEEEEEEcCC-C-CEEEEEC
Confidence 479999999999999999999997 6788899875421 112223445678899999999997 4 5667889
Q ss_pred CCcEEEEECCCCceEE----EeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccC
Q 001366 850 DGVVKLWDACTGQTVS----HYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAH 924 (1092)
Q Consensus 850 DgtV~IWD~~tg~~i~----~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~ 924 (1092)
||+|+|||+.+++... ...+|...|++++|+| ++.+|++|+.|++|++||+++++++..+. |...|++++|+|+
T Consensus 114 dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~ 192 (357)
T 4g56_B 114 SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPG 192 (357)
T ss_dssp TSCEEEC--------CCCCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccC
Confidence 9999999998886442 3447999999999999 89999999999999999999999999887 6788999999999
Q ss_pred CCeEEEEEECCCeEEEEEcCCCCcceE-EecCCCCCeEEEEEcC--CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEE
Q 001366 925 SSHLLAFGSADYRTYCYDLRNARAPWC-VLAGHEKAVSYVKFLD--SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLT 1001 (1092)
Q Consensus 925 ~~~~latgs~Dg~I~vwDlr~~~~~~~-~l~~H~~~V~~v~fs~--~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~ 1001 (1092)
+..++++++.|+.|++||+++++.... ....|...|.+++|++ +.+|++|+.|+.|++||++ .+.++.+
T Consensus 193 ~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~--------~~~~~~~ 264 (357)
T 4g56_B 193 KDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK--------NPDSAQT 264 (357)
T ss_dssp CSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS--------CGGGCEE
T ss_pred CCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECC--------CCcEeEE
Confidence 877899999999999999998764322 3456778899999984 4578999999999999998 4567889
Q ss_pred EcCCCCCeEEEEEecCC-CEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeC-CCCEEEE
Q 001366 1002 FSGHTNEKNFVGLSTAD-GYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRR-RSDMVVA 1079 (1092)
Q Consensus 1002 l~~h~~~V~~v~~spdg-~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~sp-d~~~Las 1079 (1092)
+.+|...|++++|+|++ .+||+|+.|++|+|||..+++.+.. .+|...|++|+|+| ++.+|+|
T Consensus 265 ~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~---------------~~H~~~V~~vafsP~d~~~l~s 329 (357)
T 4g56_B 265 SAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD---------------LSHRDFVTGVAWSPLDHSKFTT 329 (357)
T ss_dssp ECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE---------------CCCSSCEEEEEECSSSTTEEEE
T ss_pred EeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE---------------CCCCCCEEEEEEeCCCCCEEEE
Confidence 99999999999999987 5899999999999999988765542 25788999999999 8999999
Q ss_pred EecCCeEEEEEc
Q 001366 1080 ANSSGCIKVLQM 1091 (1092)
Q Consensus 1080 gs~DG~V~vW~l 1091 (1092)
|+.||.|++|++
T Consensus 330 ~s~Dg~v~iW~~ 341 (357)
T 4g56_B 330 VGWDHKVLHHHL 341 (357)
T ss_dssp EETTSCEEEEEC
T ss_pred EcCCCeEEEEEC
Confidence 999999999997
No 16
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.9e-41 Score=372.12 Aligned_cols=246 Identities=20% Similarity=0.235 Sum_probs=180.1
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccC-c-hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-P-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
|.+.+.++ |+|+||++... ..++.+|.|+...... . .......++..++...+||||+.+++....+...+
T Consensus 15 Y~i~~~lG~G~fg~V~~~~~~----~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~- 89 (275)
T 3hyh_A 15 YQIVKTLGEGSFGKVKLAYHT----TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEII- 89 (275)
T ss_dssp CEEEEEEEC---CCEEEEECT----TTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE-
T ss_pred eEEEEEEecCcCeEEEEEEEC----CCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE-
Confidence 55555554 78999999862 3366777776532211 1 12234556778889999999999988766554444
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
.+|||| ||+|.++|...+ .+++.+++.|++||+.||+|||++||+||||||+||||+.++.+|
T Consensus 90 ---------------ivmEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vk 152 (275)
T 3hyh_A 90 ---------------MVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVK 152 (275)
T ss_dssp ---------------EEEECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEE
T ss_pred ---------------EEEeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEE
Confidence 389999 679999998765 478889999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+|+...+.
T Consensus 153 l~DFGla~~~~~~------------------------------------------------------------------- 165 (275)
T 3hyh_A 153 IADFGLSNIMTDG------------------------------------------------------------------- 165 (275)
T ss_dssp ECCSSCC-------------------------------------------------------------------------
T ss_pred EeecCCCeecCCC-------------------------------------------------------------------
Confidence 9999999764310
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC-CccccchhhhHHHHHHcCC
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-t~~sDIwSLGvll~ell~~ 528 (1092)
...++.+||++|||||++.+..| +.++|||||||+||||++|
T Consensus 166 -------------------------------------~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg 208 (275)
T 3hyh_A 166 -------------------------------------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCR 208 (275)
T ss_dssp ----------------------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHS
T ss_pred -------------------------------------CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHC
Confidence 01125689999999999999776 6899999999999999986
Q ss_pred ---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
|...... ..+..+..... +.....++++.+||.+||++||.+|||++|+|+||||+.
T Consensus 209 ~~PF~~~~~~-~~~~~i~~~~~-~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~ 268 (275)
T 3hyh_A 209 RLPFDDESIP-VLFKNISNGVY-TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp SCSSCCSSHH-HHHHHHHHTCC-CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred CCCCCCCCHH-HHHHHHHcCCC-CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence 6554333 23333332221 112345889999999999999999999999999999974
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=356.22 Aligned_cols=306 Identities=19% Similarity=0.305 Sum_probs=247.8
Q ss_pred eecCCCC-CEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCc
Q 001366 774 EFNNSAN-VICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV 852 (1092)
Q Consensus 774 ~l~~h~~-~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dgt 852 (1092)
.+.+|.. .|.+++|+|+|++||+|+.|++|+|||+.... .........+|...|.+++|+|+ +++|++|+.|++
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~----~~~~~~~~~~h~~~v~~~~~sp~-g~~l~s~s~D~~ 84 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDS----WICKSVLSEGHQRTVRKVAWSPC-GNYLASASFDAT 84 (345)
T ss_dssp EECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTE----EEEEEEECSSCSSCEEEEEECTT-SSEEEEEETTSC
T ss_pred eecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCc----ceeeeeeccccCCcEEEEEECCC-CCEEEEEECCCc
Confidence 4668887 99999999999999999999999999986521 00111223579999999999998 899999999999
Q ss_pred EEEEECCCC--ceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCce---eeeEe-cCCceEEEEEccCCC
Q 001366 853 VKLWDACTG--QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNS---LATIK-NIANVCCVQFSAHSS 926 (1092)
Q Consensus 853 V~IWD~~tg--~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~---l~~l~-~~~~V~sl~fsp~~~ 926 (1092)
|+|||+.++ +++..+.+|...|++++|+| ++++|++|+.|++|++||++++.. +..+. |...|.+++|+|++.
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 999999876 46788999999999999999 899999999999999999987643 34444 677899999999985
Q ss_pred eEEEEEECCCeEEEEEcCCCCc-ceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCC-------CCCc
Q 001366 927 HLLAFGSADYRTYCYDLRNARA-PWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGP-------STNA 997 (1092)
Q Consensus 927 ~~latgs~Dg~I~vwDlr~~~~-~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~-------~~~~ 997 (1092)
+|++|+.|+.|++||+++... ....+.+|...|.+++|+ ++.+|++|+.|++|+|||......... ....
T Consensus 164 -~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~ 242 (345)
T 3fm0_A 164 -LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWK 242 (345)
T ss_dssp -CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEE
T ss_pred -EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccc
Confidence 899999999999999987642 346788999999999999 677999999999999999753221110 1124
Q ss_pred eeEEEcC-CCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCC-C
Q 001366 998 CSLTFSG-HTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRS-D 1075 (1092)
Q Consensus 998 ~~~~l~~-h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~-~ 1075 (1092)
++.++.+ |...|++++|+|++.+|++++.|+.|++|+...........+. .......+|...|++|+|+|++ .
T Consensus 243 ~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~-----~~~~~~~~h~~~V~~v~~~p~~~~ 317 (345)
T 3fm0_A 243 CICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFS-----LTAHLHQAHSQDVNCVAWNPKEPG 317 (345)
T ss_dssp EEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEE-----EEEEETTSSSSCEEEEEECSSSTT
T ss_pred eeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEE-----EEeeecccccCcEeEeEEeCCCce
Confidence 4556665 8899999999999999999999999999997654311100000 0001235788999999999998 5
Q ss_pred EEEEEecCCeEEEEEc
Q 001366 1076 MVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1076 ~Lasgs~DG~V~vW~l 1091 (1092)
+||||+.||.|++|++
T Consensus 318 ~laS~s~Dg~v~~W~~ 333 (345)
T 3fm0_A 318 LLASCSDDGEVAFWKY 333 (345)
T ss_dssp EEEEEETTSCEEEEEE
T ss_pred EEEEcCCCCcEEEEEe
Confidence 9999999999999996
No 18
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.2e-41 Score=386.00 Aligned_cols=248 Identities=16% Similarity=0.086 Sum_probs=185.3
Q ss_pred hhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 218 TTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 218 ~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
-..+|+|+||++.. ...+..+|.|+..-. ....++..++...+||||+.+++....+...+
T Consensus 66 lG~G~fG~Vy~a~~----~~~g~~vAiK~i~~~------~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~--------- 126 (336)
T 4g3f_A 66 VGRGSFGEVHRMKD----KQTGFQCAVKKVRLE------VFRVEELVACAGLSSPRIVPLYGAVREGPWVN--------- 126 (336)
T ss_dssp EEEETTEEEEEEEE----TTTCCEEEEEEEETT------TCCTHHHHTTTTCCCTTBCCEEEEEEETTEEE---------
T ss_pred eccCCCeEEEEEEE----CCCCCEEEEEEECHH------HhHHHHHHHHHhCCCCCCCcEEEEEEECCEEE---------
Confidence 34568999999985 234566777665221 22345777888999999999988766554444
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC-cEEEeccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN-QVKYIGPIIQ 376 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~-~vkl~Dfg~~ 376 (1092)
++||||+||+|.++|+..+ .+++.+++.|++||+.||+|||++|||||||||+||||+.+| .+||+|||++
T Consensus 127 -------ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla 198 (336)
T 4g3f_A 127 -------IFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA 198 (336)
T ss_dssp -------EEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTC
T ss_pred -------EEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCC
Confidence 3899999999999998765 477889999999999999999999999999999999999887 6999999999
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.+......
T Consensus 199 ~~~~~~~~~----------------------------------------------------------------------- 207 (336)
T 4g3f_A 199 LCLQPDGLG----------------------------------------------------------------------- 207 (336)
T ss_dssp EEC-----------------------------------------------------------------------------
T ss_pred eEccCCCcc-----------------------------------------------------------------------
Confidence 875521100
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
.........+||++|||||++.+..|+.++|||||||+||||++| |....
T Consensus 208 ---------------------------~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~ 260 (336)
T 4g3f_A 208 ---------------------------KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF 260 (336)
T ss_dssp ---------------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC
T ss_pred ---------------------------cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 000001246899999999999999999999999999999999986 43332
Q ss_pred HHHHHHHhccccCC-CCCCCCCChhHHHHHHhccccCCCCCCCHHHHh-------------hhhhhhhhhc
Q 001366 534 ALAAAMSDLRDRIL-PPSFLSENPKEAGFCLWQLHPEPLSRPTTREIL-------------QSEVTNEFQE 590 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~-p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL-------------~~~~~~~~~~ 590 (1092)
.............. +......++.+.+||.+||++||.+|||+.||+ +|||+.+.++
T Consensus 261 ~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~ 331 (336)
T 4g3f_A 261 RGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKE 331 (336)
T ss_dssp CSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCC
T ss_pred HHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCC
Confidence 22222222222211 122345688999999999999999999999985 5677766543
No 19
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.2e-37 Score=349.35 Aligned_cols=297 Identities=18% Similarity=0.273 Sum_probs=248.3
Q ss_pred eeecCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCC
Q 001366 773 GEFNNSANVICSISFDRDE-DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG 851 (1092)
Q Consensus 773 ~~l~~h~~~V~sl~fspdg-~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dg 851 (1092)
..|.+|...|++++|+|++ ++|++|+.|++|++|++..... ..........+|...|.+++|+|+ +.+|++|+.|+
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~--~~~~~~~~~~~h~~~v~~~~~s~d-g~~l~s~s~D~ 87 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ--KFGVPVRSFKGHSHIVQDCTLTAD-GAYALSASWDK 87 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT--EEEEEEEEEECCSSCEEEEEECTT-SSEEEEEETTS
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc--cccccceEEeCCcccEEEEEECCC-CCEEEEEeCCC
Confidence 3578999999999999965 8999999999999999864111 011122345689999999999998 89999999999
Q ss_pred cEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCC-----
Q 001366 852 VVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHS----- 925 (1092)
Q Consensus 852 tV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~----- 925 (1092)
+|+|||+.+++.+..+.+|...|.+++|+| ++.+|++|+.|++|++||++. .++.++. |...|.++.|+|..
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~ 165 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADDD 165 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECT-TSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC------
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCCC
Confidence 999999999999999999999999999999 889999999999999999974 5555554 67889999999853
Q ss_pred CeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcC
Q 001366 926 SHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG 1004 (1092)
Q Consensus 926 ~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~ 1004 (1092)
..++++|+.|+.|++||+++.+ ....+.+|...|.+++|+ ++.+|++|+.||+|+|||+. ...++..+..
T Consensus 166 ~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~--------~~~~~~~~~~ 236 (319)
T 3frx_A 166 SVTIISAGNDKMVKAWNLNQFQ-IEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA--------AKKAMYTLSA 236 (319)
T ss_dssp CCEEEEEETTSCEEEEETTTTE-EEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETT--------TTEEEEEEEC
T ss_pred ccEEEEEeCCCEEEEEECCcch-hheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--------CCcEEEEecC
Confidence 2489999999999999999765 456788999999999999 67789999999999999998 4566777765
Q ss_pred CCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCC
Q 001366 1005 HTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSG 1084 (1092)
Q Consensus 1005 h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG 1084 (1092)
+ ..|.+++|+|++.+|++++.+ .|++|+......+...... . ......|...|.+++|+|+|++|++|+.||
T Consensus 237 ~-~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~----~--~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg 308 (319)
T 3frx_A 237 Q-DEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPE----F--AGYSKAAEPHAVSLAWSADGQTLFAGYTDN 308 (319)
T ss_dssp C-SCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCC----C--TTCCGGGCCCEEEEEECTTSSEEEEEETTS
T ss_pred C-CcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCcc----c--cccccCcCcceeEEEECCCCCEEEEeecCc
Confidence 4 679999999999999988755 5999998876655544310 0 011234567799999999999999999999
Q ss_pred eEEEEEc
Q 001366 1085 CIKVLQM 1091 (1092)
Q Consensus 1085 ~V~vW~l 1091 (1092)
.|+||++
T Consensus 309 ~i~vWd~ 315 (319)
T 3frx_A 309 VIRVWQV 315 (319)
T ss_dssp CEEEEEE
T ss_pred eEEEEEE
Confidence 9999997
No 20
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.1e-37 Score=355.06 Aligned_cols=285 Identities=12% Similarity=0.201 Sum_probs=247.4
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.+.+|...|++++|+|++.+||||+.|++|+|||.... ........|...|.+++|+|+ +.+|++++.|++|
T Consensus 59 ~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~-------~~~~~~~~~~~~v~~~~~sp~-g~~lasg~~d~~i 130 (354)
T 2pbi_B 59 TLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTT-------NKEHAVTMPCTWVMACAYAPS-GCAIACGGLDNKC 130 (354)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-------CEEEEEECSSSCCCEEEECTT-SSEEEEESTTSEE
T ss_pred EecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCC-------CcceEEecCCCCEEEEEECCC-CCEEEEeeCCCCE
Confidence 46699999999999999999999999999999997642 122234457788999999998 9999999999999
Q ss_pred EEEECCCC------ceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCC-
Q 001366 854 KLWDACTG------QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHS- 925 (1092)
Q Consensus 854 ~IWD~~tg------~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~- 925 (1092)
++|++... .....+.+|...|.+++|+| ++..|++|+.|++|++||+++++++.++. |...|.+++|+|+.
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 209 (354)
T 2pbi_B 131 SVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSET 209 (354)
T ss_dssp EEEECCCCTTCCSGGGCEEEEECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSS
T ss_pred EEEEEeccccccccccceeeeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCC
Confidence 99998653 34567778999999999999 88899999999999999999999999887 67789999998853
Q ss_pred CeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcC
Q 001366 926 SHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG 1004 (1092)
Q Consensus 926 ~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~ 1004 (1092)
..+|++|+.|+.|++||+++++ .+..+.+|...|.+++|+ ++..|++|+.|++|++||++. ...+..+..
T Consensus 210 g~~l~sgs~Dg~v~~wd~~~~~-~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~--------~~~~~~~~~ 280 (354)
T 2pbi_B 210 GNTFVSGGCDKKAMVWDMRSGQ-CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRA--------DREVAIYSK 280 (354)
T ss_dssp CCEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--------TEEEEEECC
T ss_pred CCEEEEEeCCCeEEEEECCCCc-EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCC--------CcEEEEEcC
Confidence 2599999999999999999876 467889999999999998 677899999999999999983 334444443
Q ss_pred --CCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEec
Q 001366 1005 --HTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANS 1082 (1092)
Q Consensus 1005 --h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~ 1082 (1092)
+...+.+++|+|+|.+|++|+.|+.|++||+..+..+..+ .+|...|++++|+|++.+|++|+.
T Consensus 281 ~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l--------------~~h~~~v~~l~~spdg~~l~sgs~ 346 (354)
T 2pbi_B 281 ESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL--------------FGHENRVSTLRVSPDGTAFCSGSW 346 (354)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEE--------------CCCSSCEEEEEECTTSSCEEEEET
T ss_pred CCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEE--------------ECCCCcEEEEEECCCCCEEEEEcC
Confidence 3457899999999999999999999999999888766543 467889999999999999999999
Q ss_pred CCeEEEEE
Q 001366 1083 SGCIKVLQ 1090 (1092)
Q Consensus 1083 DG~V~vW~ 1090 (1092)
||.|+||+
T Consensus 347 D~~v~vW~ 354 (354)
T 2pbi_B 347 DHTLRVWA 354 (354)
T ss_dssp TSEEEEEC
T ss_pred CCCEEecC
Confidence 99999995
No 21
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=8.2e-37 Score=349.31 Aligned_cols=305 Identities=18% Similarity=0.294 Sum_probs=243.6
Q ss_pred eeecCCCCCEEEEEE-----cC-CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEE
Q 001366 773 GEFNNSANVICSISF-----DR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLAS 846 (1092)
Q Consensus 773 ~~l~~h~~~V~sl~f-----sp-dg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaS 846 (1092)
..|.+|...|++++| ++ ++++||+|+.|++|+|||+.................+|...|.+++|+|+ +.+|++
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~-~~~l~s 93 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQE-NCFAIS 93 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSS-TTEEEE
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCC-CCEEEE
Confidence 357799999999999 76 89999999999999999987522111111222345689999999999998 899999
Q ss_pred EECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeE---ecCCceEEEEEcc
Q 001366 847 ADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATI---KNIANVCCVQFSA 923 (1092)
Q Consensus 847 gs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l---~~~~~V~sl~fsp 923 (1092)
|+.|++|+|||+.+++.+..+.+|...|++++|+| ++..|++|+.|++|++||+......... .+...|.+++|+|
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~ 172 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSP-DNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSP 172 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECS-STTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECC
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECC-CCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecc
Confidence 99999999999999999999999999999999999 8899999999999999999843322222 2567899999999
Q ss_pred CCC---------eEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCC
Q 001366 924 HSS---------HLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGP 993 (1092)
Q Consensus 924 ~~~---------~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~ 993 (1092)
++. .+|++++.|+.|++||... .....+.+|...|.+++|+ ++.+|++|+.|++|++||+...
T Consensus 173 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~----- 245 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFASVGWDGRLKVWNTNF--QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNL----- 245 (343)
T ss_dssp CCCSCSCCCSSCCEEEEEETTSEEEEEETTT--EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCC-----
T ss_pred ccccccccCCCCCEEEEEcCCCEEEEEcCCC--ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCC-----
Confidence 862 4899999999999999542 3456788999999999999 6779999999999999999532
Q ss_pred CCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCC
Q 001366 994 STNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRR 1073 (1092)
Q Consensus 994 ~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd 1073 (1092)
......+ .+...|++++|+|++.++++| .|+.|++|++.++..+....+.. .+........+|...|.+++|+|+
T Consensus 246 --~~~~~~~-~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~sp~ 320 (343)
T 2xzm_R 246 --TYPQREF-DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEA-EPITKAEGQKGKNPQCTSLAWNAL 320 (343)
T ss_dssp --SSCSEEE-ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCC-CSGGGBTTBCCSCCCEEEEEECSS
T ss_pred --cccceee-cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeec-CcchhhhhhcCCCCceEEEEECCC
Confidence 2223333 245579999999999888755 57789999998776544222110 111111122467888999999999
Q ss_pred CCEEEEEecCCeEEEEEc
Q 001366 1074 SDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1074 ~~~Lasgs~DG~V~vW~l 1091 (1092)
+.+|++|+.||.|++|++
T Consensus 321 g~~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 321 GKKLFAGFTDGVIRTFSF 338 (343)
T ss_dssp SCCEEEEETTSEEEEEEE
T ss_pred CCeEEEecCCceEEEEEE
Confidence 999999999999999986
No 22
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8.9e-37 Score=342.94 Aligned_cols=286 Identities=25% Similarity=0.428 Sum_probs=251.1
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.+.+|...|++++|+|++++||+|+.|+.|+||++... .......+|...|.+++|+|+ +++|++|+.||+|
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~-------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i 89 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-------KFEKTISGHKLGISDVAWSSD-SNLLVSASDDKTL 89 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECTT-SSEEEEEETTSEE
T ss_pred EEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCc-------ccchhhccCCCceEEEEEcCC-CCEEEEECCCCEE
Confidence 46799999999999999999999999999999998641 222345578999999999998 8999999999999
Q ss_pred EEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEE
Q 001366 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFG 932 (1092)
Q Consensus 854 ~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latg 932 (1092)
++||+.+++++..+.+|...|.+++|+| ++.+|++|+.|++|++||+++++++..+. +...|.+++|+|++. +|++|
T Consensus 90 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~ 167 (312)
T 4ery_A 90 KIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSS 167 (312)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-EEEEE
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCC-EEEEE
Confidence 9999999999999999999999999999 88999999999999999999999988887 567899999999985 89999
Q ss_pred ECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEE
Q 001366 933 SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNF 1011 (1092)
Q Consensus 933 s~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~ 1011 (1092)
+.|+.|++||+++.+........|...+.+++|+ ++.+|++++.|+.|++||++ .+.++..+.+|...+.+
T Consensus 168 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~--------~~~~~~~~~~~~~~~~~ 239 (312)
T 4ery_A 168 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS--------KGKCLKTYTGHKNEKYC 239 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETT--------TTEEEEEECSSCCSSSC
T ss_pred eCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC--------CCcEEEEEEecCCceEE
Confidence 9999999999998765444456677889999999 67789999999999999998 45677888888776543
Q ss_pred E--EEe-cCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEe--cCCeE
Q 001366 1012 V--GLS-TADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAAN--SSGCI 1086 (1092)
Q Consensus 1012 v--~~s-pdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs--~DG~V 1086 (1092)
+ .++ +++.+|++|+.|+.|++||+..++.+..+ .+|...|.+++|+|++.+|++++ .||.|
T Consensus 240 ~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~--------------~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i 305 (312)
T 4ery_A 240 IFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL--------------QGHTDVVISTACHPTENIIASAALENDKTI 305 (312)
T ss_dssp CCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEE--------------CCCSSCEEEEEECSSSSEEEEEECTTTCCE
T ss_pred EEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhh--------------hccCCcEEEEeecCcCCceEEEEccCCccE
Confidence 3 344 57889999999999999999988776654 46788999999999999999997 69999
Q ss_pred EEEEc
Q 001366 1087 KVLQM 1091 (1092)
Q Consensus 1087 ~vW~l 1091 (1092)
++|+.
T Consensus 306 ~~W~~ 310 (312)
T 4ery_A 306 KLWKS 310 (312)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 99985
No 23
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=8.6e-37 Score=356.23 Aligned_cols=297 Identities=22% Similarity=0.376 Sum_probs=245.8
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCC-ccccc----------ceeeecCCCCeEEEEEecCCCCEEE
Q 001366 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDS-VDVYY----------PAVEMSNRSKLSCVCWNNYIKNYLA 845 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~-~~~~~----------~~~~~~h~~~V~~v~~sp~~~~~La 845 (1092)
.|...|++++|+|+|++||+|+ +++++||++....... ..... ......+...|.+++|+|+ +.+|+
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d-g~~l~ 139 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD-GKFLA 139 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT-SSEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCC-CCEEE
Confidence 5999999999999999999986 7899999986521100 00000 0000123345999999998 89999
Q ss_pred EEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCC
Q 001366 846 SADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHS 925 (1092)
Q Consensus 846 Sgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~ 925 (1092)
+|+.|++|+|||+.+++.+..+.+|...|++++|+| ++..|++|+.|++|++||++++++...+.+...+.+++|+|.+
T Consensus 140 s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~ 218 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGD 218 (393)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTT
T ss_pred EEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcC-CCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCC
Confidence 999999999999999999999999999999999999 8899999999999999999999999999888999999999944
Q ss_pred CeEEEEEECCCeEEEEEcCCCCcceEEe-------cCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCC----C
Q 001366 926 SHLLAFGSADYRTYCYDLRNARAPWCVL-------AGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTG----P 993 (1092)
Q Consensus 926 ~~~latgs~Dg~I~vwDlr~~~~~~~~l-------~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~----~ 993 (1092)
..+|++|+.|+.|++||++++.. +..+ .+|...|.+++|+ ++.+|++|+.|++|++||++...... .
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~-~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFL-VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCE-EEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred CCEEEEEcCCCcEEEEECCCCcE-EEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 46999999999999999998753 3333 5799999999999 67789999999999999998543211 1
Q ss_pred CCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeC-
Q 001366 994 STNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRR- 1072 (1092)
Q Consensus 994 ~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~sp- 1072 (1092)
....+...+.+|...|.+++|+|++.+|++|+.|+.|++||..+++++..+ .+|...|.+++|++
T Consensus 298 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l--------------~~h~~~v~~v~~~~~ 363 (393)
T 1erj_A 298 NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML--------------QGHRNSVISVAVANG 363 (393)
T ss_dssp ---CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEE--------------ECCSSCEEEEEECSS
T ss_pred CCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEE--------------CCCCCCEEEEEecCC
Confidence 124567788899999999999999999999999999999999988877654 36788999999986
Q ss_pred -----CCCEEEEEecCCeEEEEEc
Q 001366 1073 -----RSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1073 -----d~~~Lasgs~DG~V~vW~l 1091 (1092)
++.+||||+.||.|+||++
T Consensus 364 ~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 364 SSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp CTTCTTCEEEEEEETTSEEEEEEE
T ss_pred cCcCCCCCEEEEECCCCcEEECcc
Confidence 6889999999999999986
No 24
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=366.14 Aligned_cols=240 Identities=15% Similarity=0.103 Sum_probs=178.5
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCch-hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..+|+|+||+|...+ .+|+|++-...... ....-.++..++...+||||+.++.... +...+
T Consensus 45 G~G~fG~Vy~~~~~~-------~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~--------- 107 (307)
T 3omv_A 45 GSGSFGTVYKGKWHG-------DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLA--------- 107 (307)
T ss_dssp CCCSSSEEEEEESSS-------EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE---------
T ss_pred eeCCCcEEEEEEECC-------cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEE---------
Confidence 445899999998732 35555543222222 2334456788899999999998876432 11122
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++||||+||+|.++|......+++.+++.|+.||+.||+|||++|||||||||+||||+.++.+||+|||+|+
T Consensus 108 -------iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~ 180 (307)
T 3omv_A 108 -------IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLAT 180 (307)
T ss_dssp -------EEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCB
T ss_pred -------EEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCce
Confidence 3899999999999998776678999999999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
......
T Consensus 181 ~~~~~~-------------------------------------------------------------------------- 186 (307)
T 3omv_A 181 VKSRWS-------------------------------------------------------------------------- 186 (307)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred ecccCC--------------------------------------------------------------------------
Confidence 643100
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC---CCCCccccchhhhHHHHHHcCC---CCc
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---GVCTTSSNIYSLGVLFFELFGR---FDS 531 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~---~~~t~~sDIwSLGvll~ell~~---f~~ 531 (1092)
.....+..+||+.|||||++.+ ++|+.++|||||||+||||+|+ |..
T Consensus 187 ---------------------------~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~ 239 (307)
T 3omv_A 187 ---------------------------GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH 239 (307)
T ss_dssp ----------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ---------------------------cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCC
Confidence 0011225689999999999964 4699999999999999999986 544
Q ss_pred HHHHHHHHHhccccCC----CCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 532 ERALAAAMSDLRDRIL----PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 532 ~~~~~~~~~~~~~~~~----p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
..........+..... +......++.+.+|+.+||+.||.+|||+.||+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L 295 (307)
T 3omv_A 240 INNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSI 295 (307)
T ss_dssp CCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHH
T ss_pred CChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 3333333333333222 223345678899999999999999999999998764
No 25
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.9e-37 Score=347.86 Aligned_cols=296 Identities=19% Similarity=0.253 Sum_probs=231.5
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceee-ec-CCCCeEEEEEecCCCCEEEEEECCC
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE-MS-NRSKLSCVCWNNYIKNYLASADYDG 851 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~-~~-h~~~V~~v~~sp~~~~~LaSgs~Dg 851 (1092)
.+.+|...|.+++|+|+ +||+|+.|++|+||++.... ....... .+ |...|.+++|+|+ +.+|++|+.|+
T Consensus 9 ~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~-----~~~~~~~~~~~h~~~v~~v~~sp~-~~~las~s~D~ 80 (330)
T 2hes_X 9 SLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDD-----FTLIDVLDETAHKKAIRSVAWRPH-TSLLAAGSFDS 80 (330)
T ss_dssp EEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSC-----CEEEEEECTTCCCSCEEEEEECTT-SSEEEEEETTS
T ss_pred eeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCC-----eEEEEEEecCCccCCEEEEEECCC-CCEEEEEeCCC
Confidence 46689999999999987 99999999999999986421 0111112 23 8999999999998 89999999999
Q ss_pred cEEEEECCC-------CceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCC----ceeeeEe-cCCceEEE
Q 001366 852 VVKLWDACT-------GQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEK----NSLATIK-NIANVCCV 919 (1092)
Q Consensus 852 tV~IWD~~t-------g~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~----~~l~~l~-~~~~V~sl 919 (1092)
+|+|||+.. .+.+..+.+|...|++++|+| ++.+|++|+.|++|++||++.. +++..+. |...|.++
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v 159 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHV 159 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEE
Confidence 999999853 356778899999999999999 8999999999999999999532 3455565 67889999
Q ss_pred EEccCCCeEEEEEECCCeEEEEEcCCCC-cceEEecCCCCCeEEEEEcC---CCEEEEEECCCeEEEEEcCCCCCCCCCC
Q 001366 920 QFSAHSSHLLAFGSADYRTYCYDLRNAR-APWCVLAGHEKAVSYVKFLD---SGTLVTASTDNKLKLWDLKRTSHTGPST 995 (1092)
Q Consensus 920 ~fsp~~~~~latgs~Dg~I~vwDlr~~~-~~~~~l~~H~~~V~~v~fs~---~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~ 995 (1092)
+|+|++. +|++|+.|++|++||+++.. .++..+.+|...|.+++|++ +..|++|+.|++|++||+..........
T Consensus 160 ~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~ 238 (330)
T 2hes_X 160 IWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQE 238 (330)
T ss_dssp EECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEE
T ss_pred EECCCCC-EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccce
Confidence 9999985 99999999999999998653 35678899999999999984 4579999999999999997432111111
Q ss_pred CceeEEEcC-CCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCC-CEEEEEEeC-
Q 001366 996 NACSLTFSG-HTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGL-FVSSVCWRR- 1072 (1092)
Q Consensus 996 ~~~~~~l~~-h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~-~V~sva~sp- 1072 (1092)
..+...+.+ |...|++++|++++ +|++|+.|+.|+||+...+....... ...+|.. .|++++|+|
T Consensus 239 ~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~-----------~~~~h~~~~v~~v~~~~~ 306 (330)
T 2hes_X 239 WVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAK-----------RALCHGVYEINVVKWLEL 306 (330)
T ss_dssp EEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEE-----------ESCTTTTSCEEEEEEC--
T ss_pred eEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEec-----------cccccccceEEEEEEecC
Confidence 134455555 99999999999665 89999999999999976553111110 1135665 899999999
Q ss_pred -CCCEEEEEecCCeEEEEEc
Q 001366 1073 -RSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1073 -d~~~Lasgs~DG~V~vW~l 1091 (1092)
++.+||+|+.||.|+||++
T Consensus 307 ~~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 307 NGKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp ---CCEEEEETTSEEEEEEC
T ss_pred CCceEEEEecCCCcEEEEEe
Confidence 7899999999999999996
No 26
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=377.86 Aligned_cols=264 Identities=14% Similarity=0.176 Sum_probs=193.6
Q ss_pred HHHhhhcc--ccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.+| ++|+||++.. ...++.+|.|+..... ...+.....++..++...+||||+.+++.........
T Consensus 56 Y~~~~~lG~G~fG~V~~a~~----~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~-- 129 (398)
T 4b99_A 56 YEIIETIGNGAYGVVSSARR----RLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYG-- 129 (398)
T ss_dssp EEEEEEEEECSSCEEEEEEE----TTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTT--
T ss_pred eEEEEEEecccCeEEEEEEE----CCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccc--
Confidence 55555554 7899999976 3346777877653222 2333445667888999999999998876543221110
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
...- -.++||||+ |+|.++|...+ .+++.+++.|++||+.||+|||++|||||||||+|||++.++.+|+
T Consensus 130 -~~~~-------~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki 199 (398)
T 4b99_A 130 -EFKS-------VYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKI 199 (398)
T ss_dssp -TCCC-------EEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEE
T ss_pred -cCCE-------EEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEE
Confidence 0000 124899996 67999997765 5788899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++.+......
T Consensus 200 ~DFGla~~~~~~~~~----------------------------------------------------------------- 214 (398)
T 4b99_A 200 GDFGMARGLCTSPAE----------------------------------------------------------------- 214 (398)
T ss_dssp CCCTTCBCC-----------------------------------------------------------------------
T ss_pred eecceeeecccCccc-----------------------------------------------------------------
Confidence 999999875421100
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHcCC-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell~~- 528 (1092)
.....++.+||++|||||++.+. .|+.++|||||||+||||++|
T Consensus 215 ----------------------------------~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~ 260 (398)
T 4b99_A 215 ----------------------------------HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260 (398)
T ss_dssp -----------------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTS
T ss_pred ----------------------------------cccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCC
Confidence 01112367999999999999884 579999999999999999986
Q ss_pred --CCcHHHHHHHHHhccccC---------------------CCC--------CCCCCChhHHHHHHhccccCCCCCCCHH
Q 001366 529 --FDSERALAAAMSDLRDRI---------------------LPP--------SFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~---------------------~p~--------~~~~~~~~~~~li~~lL~~dP~~Rpsa~ 577 (1092)
|.+.....+......... +|+ .++..++.+.+||.+||.+||.+|||+.
T Consensus 261 ~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~ 340 (398)
T 4b99_A 261 QLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAA 340 (398)
T ss_dssp CSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred CCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHH
Confidence 666554444433322111 111 1335678899999999999999999999
Q ss_pred HHhhhhhhhhhhccc
Q 001366 578 EILQSEVTNEFQEVC 592 (1092)
Q Consensus 578 eiL~~~~~~~~~~~~ 592 (1092)
|+|+||||.+..++.
T Consensus 341 e~L~Hp~f~~~~~p~ 355 (398)
T 4b99_A 341 AALRHPFLAKYHDPD 355 (398)
T ss_dssp HHTTSGGGTTTCCGG
T ss_pred HHhcCHhhCcCCCCc
Confidence 999999999865544
No 27
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.4e-36 Score=375.46 Aligned_cols=336 Identities=17% Similarity=0.198 Sum_probs=266.9
Q ss_pred hhhhccchhhhhhccccccCCCCc--EEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCC
Q 001366 724 DLLRDRENLFLAQQDQEIQNPTDR--LGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSK 801 (1092)
Q Consensus 724 ~~l~~~~~~~~~~~~~~~~~~~~~--l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~ 801 (1092)
.++.+|...+.++. ++|++. ++++.|+++++|+....+.. + ...+.+|...|.+++|+|+|++||+++.+.
T Consensus 53 ~~~~~h~~~v~~~~----~spdg~~lasg~~d~~v~lWd~~~~~~~--~-~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~ 125 (611)
T 1nr0_A 53 EIYTEHSHQTTVAK----TSPSGYYCASGDVHGNVRIWDTTQTTHI--L-KTTIPVFSGPVKDISWDSESKRIAAVGEGR 125 (611)
T ss_dssp EEECCCSSCEEEEE----ECTTSSEEEEEETTSEEEEEESSSTTCC--E-EEEEECSSSCEEEEEECTTSCEEEEEECCS
T ss_pred eEecCCCCceEEEE----ECCCCcEEEEEeCCCCEEEeECCCCcce--e-eEeecccCCceEEEEECCCCCEEEEEECCC
Confidence 44667777666554 356664 46779999999997532211 1 124568999999999999999999998763
Q ss_pred ----cEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEE
Q 001366 802 ----KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV 877 (1092)
Q Consensus 802 ----~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv 877 (1092)
+|++||... ......+|...|.+++|+|+....|++|+.|++|++||..+++++..+.+|...|+++
T Consensus 126 ~~~~~v~~wd~~~---------~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v 196 (611)
T 1nr0_A 126 ERFGHVFLFDTGT---------SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSV 196 (611)
T ss_dssp SCSEEEEETTTCC---------BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEE
T ss_pred CceeEEEEeeCCC---------CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEE
Confidence 688887432 1123457899999999999844579999999999999999999999999999999999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEecCCCceeeeE--------ecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCc-
Q 001366 878 DFSQVHPTKLASGSDDCSVKLWNINEKNSLATI--------KNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA- 948 (1092)
Q Consensus 878 ~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l--------~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~- 948 (1092)
+|+| ++.+|++|+.|++|++||+.+++++..+ .|...|.+++|+|++. +|++|+.|++|++||+++++.
T Consensus 197 ~fsp-dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~~~~~ 274 (611)
T 1nr0_A 197 RYNP-DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVATLKVE 274 (611)
T ss_dssp EECT-TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEE
T ss_pred EECC-CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCCCcee
Confidence 9999 8999999999999999999999988877 3678899999999995 899999999999999987532
Q ss_pred -----------------------------------------ceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcC
Q 001366 949 -----------------------------------------PWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLK 986 (1092)
Q Consensus 949 -----------------------------------------~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~ 986 (1092)
....+.+|...|.+++|+ ++.+|++++.|++|++||+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 275 KTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIS 354 (611)
T ss_dssp EEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECC
Confidence 123456899999999999 67899999999999999987
Q ss_pred CCCCCCCC-----------------------------------------------------------CC-----------
Q 001366 987 RTSHTGPS-----------------------------------------------------------TN----------- 996 (1092)
Q Consensus 987 ~~~~~~~~-----------------------------------------------------------~~----------- 996 (1092)
+....... .+
T Consensus 355 ~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v 434 (611)
T 1nr0_A 355 TGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHI 434 (611)
T ss_dssp TCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEE
T ss_pred CCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceE
Confidence 54210000 00
Q ss_pred -----ceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEe
Q 001366 997 -----ACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWR 1071 (1092)
Q Consensus 997 -----~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~s 1071 (1092)
..+..+ .|...+++++|+|+|++||+|+.|++|++|++..+..... . . .+|...|++|+|+
T Consensus 435 ~~~~~~~~~~~-~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~-~-----------~-~~h~~~v~~v~fs 500 (611)
T 1nr0_A 435 AIYSHGKLTEV-PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEV-K-----------T-IVHPAEITSVAFS 500 (611)
T ss_dssp EEEETTEEEEE-ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEE-E-----------E-EECSSCEEEEEEC
T ss_pred EEEeCCceeee-ecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeee-e-----------c-cCCCCceEEEEEC
Confidence 000111 1455688999999999999999999999999865532111 1 1 3577889999999
Q ss_pred CCCCEEEEEecCCeEEEEEc
Q 001366 1072 RRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1072 pd~~~Lasgs~DG~V~vW~l 1091 (1092)
|++++|++++.|+.|++|++
T Consensus 501 pdg~~las~s~d~~v~~w~~ 520 (611)
T 1nr0_A 501 NNGAFLVATDQSRKVIPYSV 520 (611)
T ss_dssp TTSSEEEEEETTSCEEEEEG
T ss_pred CCCCEEEEEcCCCCEEEEEc
Confidence 99999999999999999986
No 28
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.3e-36 Score=355.04 Aligned_cols=286 Identities=22% Similarity=0.326 Sum_probs=249.8
Q ss_pred chhhhccchhhhhhccccccCCCC--cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCC
Q 001366 723 NDLLRDRENLFLAQQDQEIQNPTD--RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS 800 (1092)
Q Consensus 723 ~~~l~~~~~~~~~~~~~~~~~~~~--~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D 800 (1092)
...+.+|...+..+.+ +|+. .++++.|+++++|++...+... .+.+|...|.+++|+|++++||+|+.|
T Consensus 101 ~~~l~gh~~~V~~~~~----~p~~~~l~s~s~Dg~i~vwd~~~~~~~~-----~l~~h~~~V~~v~~~~~~~~l~sgs~D 171 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIF----HPVFSVMVSASEDATIKVWDYETGDFER-----TLKGHTDSVQDISFDHSGKLLASCSAD 171 (410)
T ss_dssp SCEEECCSSCEEEEEE----CSSSSEEEEEESSSCEEEEETTTCCCCE-----EECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEeecccCCcEEEEEE----cCCCCEEEEEeCCCeEEEEECCCCcEEE-----EEeccCCcEEEEEEcCCCCEEEEEeCC
Confidence 4556778777766544 4544 4578899999999988765443 356899999999999999999999999
Q ss_pred CcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEe
Q 001366 801 KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFS 880 (1092)
Q Consensus 801 ~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fs 880 (1092)
++|+|||+... .......+|...|.+++|+|+ +++|++|+.|++|++||+.+++++..+.+|...|.++.|+
T Consensus 172 ~~i~iwd~~~~-------~~~~~~~~h~~~V~~v~~~p~-~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~ 243 (410)
T 1vyh_C 172 MTIKLWDFQGF-------ECIRTMHGHDHNVSSVSIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243 (410)
T ss_dssp SCCCEEETTSS-------CEEECCCCCSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CeEEEEeCCCC-------ceeEEEcCCCCCEEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEEC
Confidence 99999998652 122234578999999999998 8999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCC-------------------CeEEEEEECCCeEEE
Q 001366 881 QVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHS-------------------SHLLAFGSADYRTYC 940 (1092)
Q Consensus 881 p~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~-------------------~~~latgs~Dg~I~v 940 (1092)
| ++.+|++|+.|++|++||++++.+...+. |...|.+++|+|++ ..+|++|+.|+.|++
T Consensus 244 ~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~i 322 (410)
T 1vyh_C 244 Q-DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322 (410)
T ss_dssp T-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEE
T ss_pred C-CCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEE
Confidence 9 89999999999999999999999988886 67789999999963 248999999999999
Q ss_pred EEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCC
Q 001366 941 YDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADG 1019 (1092)
Q Consensus 941 wDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~ 1019 (1092)
||++++. .+..+.+|...|.+++|+ ++.+|++|+.|++|++||+. .+.++.++.+|...|++++|+|++.
T Consensus 323 wd~~~~~-~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~--------~~~~~~~~~~h~~~v~~l~~~~~~~ 393 (410)
T 1vyh_C 323 WDVSTGM-CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK--------NKRCMKTLNAHEHFVTSLDFHKTAP 393 (410)
T ss_dssp EETTTTE-EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCT--------TSCCCEEEECCSSCEEEEEECSSSS
T ss_pred EECCCCc-eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--------CCceEEEEcCCCCcEEEEEEcCCCC
Confidence 9999875 467888999999999999 66789999999999999997 4567889999999999999999999
Q ss_pred EEEEEecCCcEEEEeC
Q 001366 1020 YIACGSESNEVYAYHR 1035 (1092)
Q Consensus 1020 ~lasgs~Dg~I~Iwd~ 1035 (1092)
+|++||.|++|+||+.
T Consensus 394 ~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 394 YVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CEEEEETTSEEEEEC-
T ss_pred EEEEEeCCCcEEEEeC
Confidence 9999999999999975
No 29
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.6e-35 Score=336.64 Aligned_cols=287 Identities=19% Similarity=0.250 Sum_probs=244.5
Q ss_pred chhhhccchhhhhhccccccCCCC--cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCC
Q 001366 723 NDLLRDRENLFLAQQDQEIQNPTD--RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS 800 (1092)
Q Consensus 723 ~~~l~~~~~~~~~~~~~~~~~~~~--~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D 800 (1092)
...+++|.+.+.++.+ +|++ .++++.|+++++|+......... +..|...|.+++|+|++++||+|+.|
T Consensus 48 ~~~l~gH~~~v~~~~~----s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~-----~~~~~~~v~~~~~s~~~~~l~s~~~d 118 (340)
T 1got_B 48 RRTLRGHLAKIYAMHW----GTDSRLLLSASQDGKLIIWDSYTTNKVHA-----IPLRSSWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp EEEECCCSSCEEEEEE----CTTSSEEEEEETTTEEEEEETTTCCEEEE-----EECSSSCEEEEEECTTSSEEEEEETT
T ss_pred heeecCCCCceEEEEE----CCCCCEEEEEeCCCcEEEEECCCCCcceE-----eecCCccEEEEEECCCCCEEEEEeCC
Confidence 4557788777766543 4544 45788999999999877655433 45789999999999999999999999
Q ss_pred CcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEe
Q 001366 801 KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFS 880 (1092)
Q Consensus 801 ~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fs 880 (1092)
+.|+||++.... ..........+|...|.++.|+++ ..+++++.|++|++||+.+++.+..+.+|...|++++|+
T Consensus 119 ~~v~iw~~~~~~---~~~~~~~~~~~h~~~v~~~~~~~~--~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~ 193 (340)
T 1got_B 119 NICSIYNLKTRE---GNVRVSRELAGHTGYLSCCRFLDD--NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLA 193 (340)
T ss_dssp CEEEEEETTTCS---BSCEEEEEEECCSSCEEEEEEEET--TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CeEEEEECccCC---CcceeEEEecCCCccEEEEEECCC--CcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEEC
Confidence 999999987521 111223345679999999999985 469999999999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEec--CCC
Q 001366 881 QVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLA--GHE 957 (1092)
Q Consensus 881 p~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~--~H~ 957 (1092)
| ++.+|++|+.|++|++||++++.++.++. |...|++++|+|++. +|++|+.|+.|++||+++... +..+. .+.
T Consensus 194 ~-~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~d~~v~iwd~~~~~~-~~~~~~~~~~ 270 (340)
T 1got_B 194 P-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN-AFATGSDDATCRLFDLRADQE-LMTYSHDNII 270 (340)
T ss_dssp T-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEE-EEEECCTTCC
T ss_pred C-CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCcE-EEEEccCCcc
Confidence 9 88999999999999999999999998887 677899999999985 899999999999999998654 33333 334
Q ss_pred CCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEe
Q 001366 958 KAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYH 1034 (1092)
Q Consensus 958 ~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd 1034 (1092)
..|.+++|+ ++.+|++|+.|+.|++||+. ....+..+.+|...|++++|+|+|.+||+||.|++|+|||
T Consensus 271 ~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~--------~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDAL--------KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETT--------TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cceEEEEECCCCCEEEEECCCCeEEEEEcc--------cCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 579999999 67789999999999999998 3566788999999999999999999999999999999996
No 30
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.8e-35 Score=360.65 Aligned_cols=299 Identities=25% Similarity=0.322 Sum_probs=260.9
Q ss_pred cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeec
Q 001366 747 RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS 826 (1092)
Q Consensus 747 ~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~ 826 (1092)
.+++..|+.+++|+... +... .+.+|...|.+++|+|++++|++++.|++|++||... .......+
T Consensus 277 l~~~~~d~~i~~w~~~~-~~~~-----~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~--------~~~~~~~~ 342 (577)
T 2ymu_A 277 IASASDDKTVKLWNRNG-QLLQ-----TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG--------QHLQTLTG 342 (577)
T ss_dssp EEEEETTSCEEEEETTS-CEEE-----EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS--------CEEEEECC
T ss_pred EEEEeCCCEEEEEeCCC-cEEE-----EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC--------CeeEEEeC
Confidence 45778999999999643 2221 3568999999999999999999999999999999764 12233456
Q ss_pred CCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCce
Q 001366 827 NRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNS 906 (1092)
Q Consensus 827 h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~ 906 (1092)
|...|.+++|+|+ +.+|++++.||+|++||. +++.+..+.+|...|.+++|+| ++.+|++++.|+.|++||. +++.
T Consensus 343 ~~~~v~~~~~s~~-g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~~d~~v~~~~~-~~~~ 418 (577)
T 2ymu_A 343 HSSSVWGVAFSPD-GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQL 418 (577)
T ss_dssp CSSCEEEEEECTT-SSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSEEEEECT-TCCE
T ss_pred CCCCEEEEEECCC-CCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECC-CCCEEEEEeCCCEEEEEeC-CCCE
Confidence 8899999999998 899999999999999995 6788899999999999999999 8999999999999999996 4666
Q ss_pred eeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEE
Q 001366 907 LATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWD 984 (1092)
Q Consensus 907 l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWD 984 (1092)
+..+. +...|++++|+|++. +|++++.|+.|++||... ..+..+.+|...|.+++|+ ++.+|++++.|++|++||
T Consensus 419 ~~~~~~~~~~v~~~~~s~d~~-~l~~~~~d~~v~~w~~~~--~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~ 495 (577)
T 2ymu_A 419 LQTLTGHSSSVWGVAFSPDDQ-TIASASDDKTVKLWNRNG--QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 495 (577)
T ss_dssp EEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTS--CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred EEEecCCCCCeEEEEECCCCC-EEEEEcCCCEEEEEECCC--CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEc
Confidence 76666 678899999999985 899999999999999743 3467788999999999999 677899999999999999
Q ss_pred cCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCC
Q 001366 985 LKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLF 1064 (1092)
Q Consensus 985 l~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~ 1064 (1092)
.. +.++..+.+|...|++++|+|+|++||+|+.|+.|++||. .++.+..+ .+|...
T Consensus 496 ~~---------~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~--------------~~h~~~ 551 (577)
T 2ymu_A 496 RN---------GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL--------------TGHSSS 551 (577)
T ss_dssp TT---------SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEE--------------ECCSSC
T ss_pred CC---------CCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEE--------------cCCCCC
Confidence 64 5678899999999999999999999999999999999995 45555433 468899
Q ss_pred EEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1065 VSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1065 V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
|++++|+||+++|+|++.||+|++||
T Consensus 552 v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 552 VWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 99999999999999999999999997
No 31
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=8.1e-39 Score=368.71 Aligned_cols=276 Identities=15% Similarity=0.128 Sum_probs=180.6
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.+ |++|+||++...-.. ..++.+|.|+..... ......++...+... .||||+.+++....+...+
T Consensus 23 Y~i~~~lG~G~fg~Vy~a~~~~~~-~~~~~vAiK~i~~~~---~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~-- 96 (361)
T 4f9c_A 23 FKIEDKIGEGTFSSVYLATAQLQV-GPEEKIALKHLIPTS---HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV-- 96 (361)
T ss_dssp CEEEEEEEECSSEEEEEEEEEBTT-SCEEEEEEEEECTTS---CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE--
T ss_pred EEEEEEEecccCcEEEEEEEcccC-CCCCEEEEEEEcccc---CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE--
Confidence 4554444 478999999641101 124556666543322 222344555556655 7999999887766554444
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC-CcEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-NQVK 369 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~-~~vk 369 (1092)
.+||||+|++|.++++ .++..+++.|++||+.||+|||++||+||||||+||||+.+ +.+|
T Consensus 97 --------------lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~k 158 (361)
T 4f9c_A 97 --------------IAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYA 158 (361)
T ss_dssp --------------EEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEE
T ss_pred --------------EEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEE
Confidence 3899999999999994 37788999999999999999999999999999999999876 8999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+|+...+.... +.+|
T Consensus 159 l~DFGla~~~~~~~~~------------------------------------------------------------~~~~ 178 (361)
T 4f9c_A 159 LVDFGLAQGTHDTKIE------------------------------------------------------------LLKF 178 (361)
T ss_dssp ECCCTTCEECTTCSCG------------------------------------------------------------GGGG
T ss_pred ECcCCCCcccCCcccc------------------------------------------------------------cccc
Confidence 9999999876532110 0000
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHcCC
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell~~ 528 (1092)
+........... ..+.........++..+||++|||||++.+. .|+.++|||||||+||||++|
T Consensus 179 ~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G 243 (361)
T 4f9c_A 179 VQSEAQQERCSQ---------------NKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243 (361)
T ss_dssp C-----------------------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred cccccccccccc---------------ccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHC
Confidence 000000000000 0000000112234578999999999999885 489999999999999999985
Q ss_pred ---CC-cHHHHHHHHHhcc--------------------ccC--------------------------------CCCCCC
Q 001366 529 ---FD-SERALAAAMSDLR--------------------DRI--------------------------------LPPSFL 552 (1092)
Q Consensus 529 ---f~-~~~~~~~~~~~~~--------------------~~~--------------------------------~p~~~~ 552 (1092)
|. +..+..+...... ... ..+.+.
T Consensus 244 ~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 323 (361)
T 4f9c_A 244 RYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWN 323 (361)
T ss_dssp CSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CT
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccc
Confidence 42 2222222111100 000 011234
Q ss_pred CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 553 SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 553 ~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
..++++.+||.+||++||.+|||++|+|+||||++.
T Consensus 324 ~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i 359 (361)
T 4f9c_A 324 EVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359 (361)
T ss_dssp TCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred cCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 567889999999999999999999999999999874
No 32
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.9e-38 Score=357.27 Aligned_cols=247 Identities=18% Similarity=0.162 Sum_probs=185.0
Q ss_pred hhccccceeeeCCCCCcc-ccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 218 TTLKGKGIVCRGPPLNAF-KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 218 ~~~~g~Gvv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
-..||+|.||+|...... ...+..+|+|+............-.++..++...+||||+.++.....+...+
T Consensus 34 lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~-------- 105 (308)
T 4gt4_A 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS-------- 105 (308)
T ss_dssp EEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE--------
T ss_pred eccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE--------
Confidence 344589999999752211 11245567666533322222233456778888999999999887765444443
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeE
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFK 361 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nil 361 (1092)
++||||+||+|.++|.... ..+++.+++.|+.||+.||+|||+++||||||||+|||
T Consensus 106 --------lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NIL 177 (308)
T 4gt4_A 106 --------MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVL 177 (308)
T ss_dssp --------EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred --------EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceE
Confidence 3899999999999996532 24788899999999999999999999999999999999
Q ss_pred EccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 362 LLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 362 l~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
|+.++.+||+|||+++.+.....
T Consensus 178 l~~~~~~Ki~DFGlar~~~~~~~--------------------------------------------------------- 200 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYAADY--------------------------------------------------------- 200 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGGGGC---------------------------------------------------------
T ss_pred ECCCCCEEECCcccceeccCCCc---------------------------------------------------------
Confidence 99999999999999987542100
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHH
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVL 521 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvl 521 (1092)
....+..+||+.|||||++.++.|+.++|||||||+
T Consensus 201 --------------------------------------------~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvv 236 (308)
T 4gt4_A 201 --------------------------------------------YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVV 236 (308)
T ss_dssp --------------------------------------------BCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred --------------------------------------------eeEecccccCCcccCHHHHhCCCCCccchhhhHHHH
Confidence 001125679999999999999999999999999999
Q ss_pred HHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 522 FFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 522 l~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
||||+| + |.+.... ..+..+.....+|.....++.+.+|+.+||+.||.+|||+.||+++
T Consensus 237 l~El~t~g~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 237 LWEVFSYGLQPYCGYSNQ-DVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp HHHHHTTTCCTTTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 999997 3 5444333 2333344444445555678889999999999999999999999875
No 33
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1e-34 Score=327.98 Aligned_cols=299 Identities=20% Similarity=0.298 Sum_probs=247.3
Q ss_pred eeecCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCC
Q 001366 773 GEFNNSANVICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG 851 (1092)
Q Consensus 773 ~~l~~h~~~V~sl~fspd-g~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dg 851 (1092)
..|.+|.+.|++|+|+|+ +++|||||.|++|+|||+..... ..........+|...|.+++|+|+ +.+|++++.|+
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~--~~~~~~~~l~~h~~~V~~~~~s~d-g~~l~s~~~d~ 108 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET--NYGIPQRALRGHSHFVSDVVISSD-GQFALSGSWDG 108 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSS--CSEEEEEEECCCSSCEEEEEECTT-SSEEEEEETTS
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc--ccceeeEEEeCCCCCEEEEEECCC-CCEEEEEcccc
Confidence 357899999999999997 68999999999999999875221 111222345679999999999998 89999999999
Q ss_pred cEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeE--ecCCceEEEEEccCCC-eE
Q 001366 852 VVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATI--KNIANVCCVQFSAHSS-HL 928 (1092)
Q Consensus 852 tV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l--~~~~~V~sl~fsp~~~-~~ 928 (1092)
.|++|+............+...+..+.+++ ++..|++|+.|+.+++||+......... .+...+.+++|++++. .+
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 109 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred cceEEeecccceeeeecCCCCceeEEEEee-cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence 999999999988888888889999999999 7889999999999999999866543322 2567899999998753 47
Q ss_pred EEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCC
Q 001366 929 LAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTN 1007 (1092)
Q Consensus 929 latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~ 1007 (1092)
+++++.|+.|++||+++.+ ....+.+|...|.+++|+ ++.+|++|+.|++|++||++ ...++..+..+ .
T Consensus 188 ~~s~~~d~~i~i~d~~~~~-~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~--------~~~~~~~~~~~-~ 257 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN--------EGKHLYTLDGG-D 257 (340)
T ss_dssp EEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETT--------TTEEEEEEECS-S
T ss_pred EEEEcCCCEEEEEECCCCc-eeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEec--------cCceeeeecCC-c
Confidence 8899999999999999875 467788999999999999 67799999999999999998 34566677654 5
Q ss_pred CeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEE
Q 001366 1008 EKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIK 1087 (1092)
Q Consensus 1008 ~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~ 1087 (1092)
.+.+++|+|++.++ +++.|+.|++||+..+..+..+... ........|...|++++|+|++++|+||+.||.|+
T Consensus 258 ~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~ 331 (340)
T 4aow_A 258 IINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQE-----VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR 331 (340)
T ss_dssp CEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC------------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEecccc-----ceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 79999999987654 5667999999999888777665421 11123357888999999999999999999999999
Q ss_pred EEEc
Q 001366 1088 VLQM 1091 (1092)
Q Consensus 1088 vW~l 1091 (1092)
||++
T Consensus 332 iW~~ 335 (340)
T 4aow_A 332 VWQV 335 (340)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 9996
No 34
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.9e-35 Score=334.10 Aligned_cols=288 Identities=19% Similarity=0.249 Sum_probs=248.3
Q ss_pred hhccchhhhhhcccccc--CCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Q 001366 726 LRDRENLFLAQQDQEIQ--NPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKI 803 (1092)
Q Consensus 726 l~~~~~~~~~~~~~~~~--~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I 803 (1092)
+.+|.+.+.++.+.... +..-.++++.|+++++|++...... ....+.+|...|.+++|++++.++++|+.|++|
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~---~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i 104 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLD---LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 104 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEE---EEEEECCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCee---eeeeeccCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 45677777666542211 1223568899999999998654332 123477999999999999999999999999999
Q ss_pred EEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCC
Q 001366 804 KIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVH 883 (1092)
Q Consensus 804 ~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~ 883 (1092)
+|||+... ........+...+.+++|+|+ +.+|++++.||+|++||+.+++....+..|...|.+++|+| +
T Consensus 105 ~lWd~~~~-------~~~~~~~~~~~~~~~~~~spd-g~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~sp-d 175 (321)
T 3ow8_A 105 RLWDLENG-------KQIKSIDAGPVDAWTLAFSPD-SQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP-D 175 (321)
T ss_dssp EEEETTTT-------EEEEEEECCTTCCCCEEECTT-SSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECT-T
T ss_pred EEEECCCC-------CEEEEEeCCCccEEEEEECCC-CCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECC-C
Confidence 99998752 222334457788999999998 89999999999999999999999999999999999999999 8
Q ss_pred CCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEE
Q 001366 884 PTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSY 962 (1092)
Q Consensus 884 ~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~ 962 (1092)
+++|++|+.|+.|++||+++++.+.++. +...|.+++|+|++. +|++|+.|+.|++||+++.. ....+.+|...|.+
T Consensus 176 g~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~~~-~~~~~~~h~~~v~~ 253 (321)
T 3ow8_A 176 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHAN-LAGTLSGHASWVLN 253 (321)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSC-EEEEECTTSCEEEEETTTCC-EEEEECCCSSCEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCCcc-eeEEEcCCCCceEE
Confidence 9999999999999999999999998887 577899999999985 99999999999999999765 46788999999999
Q ss_pred EEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeC
Q 001366 963 VKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHR 1035 (1092)
Q Consensus 963 v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~ 1035 (1092)
++|+ ++.+|++++.|++|+|||+. .+.++.++.+|...|++++|+|++.+|++++.|+.|+|||.
T Consensus 254 ~~~sp~~~~l~s~s~D~~v~iwd~~--------~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 254 VAFCPDDTHFVSSSSDKSVKVWDVG--------TRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETT--------TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCC--------CCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 9999 67789999999999999998 46788999999999999999999999999999999999985
No 35
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.2e-38 Score=355.24 Aligned_cols=254 Identities=16% Similarity=0.109 Sum_probs=186.8
Q ss_pred HHHhhhc--cccceeeeCCCCCccc-cccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFK-ERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.+ +|+|.||+|...+... ..+..+|.|+.... .......-.++..++...+||||+.++.....+...+
T Consensus 15 ~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~-- 91 (299)
T 4asz_A 15 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI-- 91 (299)
T ss_dssp EEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE--
T ss_pred eEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC-ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE--
Confidence 4444444 5799999997532111 12445666654322 1222334557888899999999999888766444444
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcC------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCC
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPS 358 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~ 358 (1092)
++||||+||+|.++|...+ ..+++.+++.|+.||++||+|||+++||||||||+
T Consensus 92 --------------lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~ 157 (299)
T 4asz_A 92 --------------MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATR 157 (299)
T ss_dssp --------------EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred --------------EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHh
Confidence 3899999999999997643 46888899999999999999999999999999999
Q ss_pred CeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcc
Q 001366 359 SFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKI 438 (1092)
Q Consensus 359 Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1092)
||||+.++.+||+|||+++.......
T Consensus 158 NILl~~~~~~Ki~DFGla~~~~~~~~------------------------------------------------------ 183 (299)
T 4asz_A 158 NCLVGENLLVKIGDFGMSRDVYSTDY------------------------------------------------------ 183 (299)
T ss_dssp GEEECGGGCEEECCCSCHHHHTGGGC------------------------------------------------------
T ss_pred hEEECCCCcEEECCcccceecCCCCc------------------------------------------------------
Confidence 99999999999999999987541100
Q ss_pred cccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhh
Q 001366 439 ETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSL 518 (1092)
Q Consensus 439 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSL 518 (1092)
.......+||+.|||||++.+..|+.++|||||
T Consensus 184 -----------------------------------------------~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~ 216 (299)
T 4asz_A 184 -----------------------------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSL 216 (299)
T ss_dssp -----------------------------------------------EEETTTEEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred -----------------------------------------------eeecCceecChhhcCHHHHcCCCCCchhhHHHH
Confidence 000114578999999999999999999999999
Q ss_pred hHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 519 GVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 519 Gvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
||+||||+| | |....... .+..+.....++.....++++.+|+.+||+.||++|||+.+|+ +++...
T Consensus 217 Gvvl~Ellt~G~~Pf~~~~~~~-~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~--~~L~~~ 287 (299)
T 4asz_A 217 GVVLWEIFTYGKQPWYQLSNNE-VIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIH--TLLQNL 287 (299)
T ss_dssp HHHHHHHHTTTCCTTTTSCHHH-HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH--HHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCHHH-HHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHH--HHHHHH
Confidence 999999997 4 54433332 3333333333444455688899999999999999999999994 566543
No 36
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=6.3e-38 Score=356.34 Aligned_cols=245 Identities=15% Similarity=0.058 Sum_probs=178.3
Q ss_pred hccccceeeeCCCCCccc-cccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFK-ERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..+|+|+||+|...+... ..+..+|.|+.... .......-.++..++...+||||+.++.....+...+
T Consensus 50 G~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~--------- 119 (329)
T 4aoj_A 50 GEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL--------- 119 (329)
T ss_dssp EECSSEEEEEEEESSSCC---CEEEEEEEESCC-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE---------
T ss_pred ccCCCcEEEEEEECCcccCCCCeEEEEEEECcC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE---------
Confidence 445899999997532111 12455666655322 2222334457888899999999999887765444434
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARG--------------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL 363 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~--------------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~ 363 (1092)
++||||+||+|.++|+..+ ..+++.+++.|+.||+.||+|||+++||||||||+||||+
T Consensus 120 -------lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 120 -------MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG 192 (329)
T ss_dssp -------EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE
T ss_pred -------EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEEC
Confidence 3899999999999997643 2478889999999999999999999999999999999999
Q ss_pred cCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCc
Q 001366 364 QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANE 443 (1092)
Q Consensus 364 ~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1092)
.++.+||+|||+++.+.....
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~----------------------------------------------------------- 213 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDY----------------------------------------------------------- 213 (329)
T ss_dssp TTTEEEECCCC---------------------------------------------------------------------
T ss_pred CCCcEEEcccccceeccCCCc-----------------------------------------------------------
Confidence 999999999999987541100
Q ss_pred cccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHH
Q 001366 444 SDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFF 523 (1092)
Q Consensus 444 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ 523 (1092)
....+..+||+.|||||++.+..|+.++|||||||+||
T Consensus 214 ------------------------------------------~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~ 251 (329)
T 4aoj_A 214 ------------------------------------------YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLW 251 (329)
T ss_dssp ------------------------------------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred ------------------------------------------ceecCcccccccccChhhhcCCCCCccccccchHHHHH
Confidence 00012457999999999999999999999999999999
Q ss_pred HHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 524 ELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 524 ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
||+| + |........ +..+.....++.....++++.+|+.+||+.||++|||+.||+++
T Consensus 252 Ellt~G~~Pf~~~~~~~~-~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~ 313 (329)
T 4aoj_A 252 EIFTYGKQPWYQLSNTEA-IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR 313 (329)
T ss_dssp HHHTTSCCTTCSSCHHHH-HHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred HHHcCCCCCCCCCCHHHH-HHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 9997 4 544333332 22233322333344568899999999999999999999999875
No 37
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-36 Score=352.32 Aligned_cols=327 Identities=15% Similarity=0.182 Sum_probs=265.9
Q ss_pred EcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCC
Q 001366 751 FFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSK 830 (1092)
Q Consensus 751 ~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~ 830 (1092)
+.|+.+++|++........+ ....|...|++++|+|++.+||+|+.|+.|+||++...... ........+|...
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~---~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~---~~~~~~~~~h~~~ 115 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPI---ASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNA---INSMARFSNHSSS 115 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCS---CCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSC---CCEEEECCCSSSC
T ss_pred CCCCeEEEEEccCCCCCcEE---EEEecCCceEEEEECCCCCeEEEEccCCeEEEeeccccccc---ccchhhccCCccc
Confidence 57889999998754321111 12358899999999999999999999999999998752111 1122344568999
Q ss_pred eEEEEEecCCCCEEEEEECCCcEEEEECCCCc------eEE---EeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEec
Q 001366 831 LSCVCWNNYIKNYLASADYDGVVKLWDACTGQ------TVS---HYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNI 901 (1092)
Q Consensus 831 V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~------~i~---~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl 901 (1092)
|.+++|+|+++.+|++++.||+|++||+.+++ ... .+..|...|.+++|+|..+.+|++++.|+.|++||+
T Consensus 116 v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~ 195 (416)
T 2pm9_A 116 VKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDL 195 (416)
T ss_dssp CCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEET
T ss_pred eEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEEC
Confidence 99999999768899999999999999999876 332 346799999999999944789999999999999999
Q ss_pred CCCceeeeEec-------CCceEEEEEccCCCeEEEEEECCC---eEEEEEcCCCCcceEEec-CCCCCeEEEEEcC--C
Q 001366 902 NEKNSLATIKN-------IANVCCVQFSAHSSHLLAFGSADY---RTYCYDLRNARAPWCVLA-GHEKAVSYVKFLD--S 968 (1092)
Q Consensus 902 ~~~~~l~~l~~-------~~~V~sl~fsp~~~~~latgs~Dg---~I~vwDlr~~~~~~~~l~-~H~~~V~~v~fs~--~ 968 (1092)
++++.+..+.. ...|.+++|+|++..++++++.|+ .|++||+++...++..+. +|...|.+++|++ +
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 275 (416)
T 2pm9_A 196 KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDE 275 (416)
T ss_dssp TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCS
T ss_pred CCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCC
Confidence 99999888874 578999999999877999999999 999999998766677787 9999999999984 6
Q ss_pred CEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCC-CEEEEEecCCcEEEEeCCCCCceeeeec-
Q 001366 969 GTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTAD-GYIACGSESNEVYAYHRSLPMPITSYKF- 1046 (1092)
Q Consensus 969 ~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg-~~lasgs~Dg~I~Iwd~~~~~~i~~~~~- 1046 (1092)
.+|++++.|++|++||++ .+.++..+.+|...|++++|+|++ .+|++++.|+.|+||++..........-
T Consensus 276 ~~l~s~~~dg~v~~wd~~--------~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~ 347 (416)
T 2pm9_A 276 HLLLSSGRDNTVLLWNPE--------SAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQET 347 (416)
T ss_dssp SCEEEEESSSEEEEECSS--------SCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC---
T ss_pred CeEEEEeCCCCEEEeeCC--------CCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccc
Confidence 789999999999999998 456788999999999999999998 8999999999999999987654332110
Q ss_pred ------------cc------c---CCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEcC
Q 001366 1047 ------------GS------I---DPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQMV 1092 (1092)
Q Consensus 1047 ------------~~------~---~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~lv 1092 (1092)
.. . ....- .....|...|.+++|+|+|++|++++.||.|+||++.
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 348 ETKQQESETDFWNNVSREESKEKPSVFHL-QAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp -------------------CCSCCCSSCC-CCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCC
T ss_pred cccccCCcccccccccccccccccccccc-cCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEec
Confidence 00 0 00000 1112367788999999999999999999999999973
No 38
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-34 Score=335.66 Aligned_cols=328 Identities=16% Similarity=0.240 Sum_probs=261.9
Q ss_pred cCCCCc---EEeEcCCeEEEEEc----ccce------EEeeEEeeeec------CCCCCEEEEEEcCCCCEEEEEeCCCc
Q 001366 742 QNPTDR---LGAFFDGLCKYARY----SKFE------VQGMLRTGEFN------NSANVICSISFDRDEDHFAAAGVSKK 802 (1092)
Q Consensus 742 ~~~~~~---l~~~~D~~~k~w~~----~~~~------~~~~l~~~~l~------~h~~~V~sl~fspdg~~latgg~D~~ 802 (1092)
++|++. +.+..|+.+++|++ ...+ ....+.. .+. +|...|++++|+|++++|++|+.|+.
T Consensus 53 ~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 131 (425)
T 1r5m_A 53 WNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRH-PFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGE 131 (425)
T ss_dssp ECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEEC-CCCCC------CBCEEEEEECTTSSEEEEEETTSC
T ss_pred ECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccc-cccccccccCCCCceEEEEEcCCCCEEEEEeCCCe
Confidence 456544 46678999999998 5554 2222221 222 26889999999999999999999999
Q ss_pred EEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCcc---------
Q 001366 803 IKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKR--------- 873 (1092)
Q Consensus 803 I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~--------- 873 (1092)
|+||+... ........|...|.+++|+|+ +.+|++++.||.|++||+.+++.+..+..|...
T Consensus 132 i~i~~~~~--------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (425)
T 1r5m_A 132 LRLWNKTG--------ALLNVLNFHRAPIVSVKWNKD-GTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENH 202 (425)
T ss_dssp EEEEETTS--------CEEEEECCCCSCEEEEEECTT-SSEEEEEETTCCEEEEETTTTEEEEEECCC------------
T ss_pred EEEEeCCC--------CeeeeccCCCccEEEEEECCC-CCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccc
Confidence 99999432 222344568999999999998 889999999999999999999999999888777
Q ss_pred ------EEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCC
Q 001366 874 ------AWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNA 946 (1092)
Q Consensus 874 ------V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~ 946 (1092)
+.++.|++ + ..+++++.|+.|++||+++++.+..+. +...|.+++|+|++. +|++++.|+.|++||+++.
T Consensus 203 ~~~~~~~~~~~~~~-~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~ 279 (425)
T 1r5m_A 203 SGDGSLGVDVEWVD-D-DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNK-LLLSASDDGTLRIWHGGNG 279 (425)
T ss_dssp ---CCCBSCCEEEE-T-TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEECSSSB
T ss_pred cCCcceeeEEEEcC-C-CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCC
Confidence 99999998 4 579999999999999999998888886 678899999999986 8999999999999999986
Q ss_pred CcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEec
Q 001366 947 RAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSE 1026 (1092)
Q Consensus 947 ~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~ 1026 (1092)
+ ....+.+|...|.+++|++++.+++++.|+.|++||++ .+.++..+..|...+.+++|+|++.+|++|+.
T Consensus 280 ~-~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~--------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 350 (425)
T 1r5m_A 280 N-SQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLK--------QNTLLALSIVDGVPIFAGRISQDGQKYAVAFM 350 (425)
T ss_dssp S-CSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETT--------TTEEEEEEECTTCCEEEEEECTTSSEEEEEET
T ss_pred c-cceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECC--------CCcEeEecccCCccEEEEEEcCCCCEEEEEEC
Confidence 5 45777889999999999966699999999999999998 45678888899999999999999999999999
Q ss_pred CCcEEEEeCCCCCceeeeeccccCC------CCCccccCCCCC--CEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1027 SNEVYAYHRSLPMPITSYKFGSIDP------ISGKETDDDNGL--FVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1027 Dg~I~Iwd~~~~~~i~~~~~~~~~~------i~~~~~~~~h~~--~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
|+.|++|++..+........+..+. .........|.. .|++++|+|++.+|++++.||.|+||++
T Consensus 351 dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 351 DGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp TSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEEC
T ss_pred CCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEee
Confidence 9999999987665111000000000 001123345654 8999999999999999999999999997
No 39
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-34 Score=325.98 Aligned_cols=284 Identities=15% Similarity=0.210 Sum_probs=248.7
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.+.+|...|++++|+|++++||+|+.|+.|+|||+... .......+|...|.+++|+|+ +++|++++.||+|
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i 98 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG-------ERLGTLDGHTGTIWSIDVDCF-TKYCVTGSADYSI 98 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTC-------CEEEEECCCSSCEEEEEECTT-SSEEEEEETTTEE
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc-------hhhhhhhhcCCcEEEEEEcCC-CCEEEEEeCCCeE
Confidence 46799999999999999999999999999999998752 222344568999999999997 8999999999999
Q ss_pred EEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCC-----CcEEEEecCCCceee-----------eEe-cCC--
Q 001366 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDD-----CSVKLWNINEKNSLA-----------TIK-NIA-- 914 (1092)
Q Consensus 854 ~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~D-----g~I~iWDl~~~~~l~-----------~l~-~~~-- 914 (1092)
++||+.+++.+..+. |...|.+++|+| ++..+++++.+ +.|++||+..+.... .+. +..
T Consensus 99 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (369)
T 3zwl_B 99 KLWDVSNGQCVATWK-SPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLD 176 (369)
T ss_dssp EEEETTTCCEEEEEE-CSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCC
T ss_pred EEEECCCCcEEEEee-cCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcc
Confidence 999999999998887 889999999999 88999999999 999999998765332 222 223
Q ss_pred ceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCC
Q 001366 915 NVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGP 993 (1092)
Q Consensus 915 ~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~ 993 (1092)
.+.+++|+|++. +|++|+.||.|++||+++....+..+..|...|.+++|+ ++.+|++++.|+.|++||+++
T Consensus 177 ~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~------ 249 (369)
T 3zwl_B 177 AATVAGWSTKGK-YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST------ 249 (369)
T ss_dssp CEEEEEECGGGC-EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT------
T ss_pred ceeEEEEcCCCC-EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC------
Confidence 899999999985 899999999999999998556678888999999999999 677899999999999999983
Q ss_pred CCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCC--------------cEEEEeCCCCCceeeeeccccCCCCCccccC
Q 001366 994 STNACSLTFSGHTNEKNFVGLSTADGYIACGSESN--------------EVYAYHRSLPMPITSYKFGSIDPISGKETDD 1059 (1092)
Q Consensus 994 ~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg--------------~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~ 1059 (1092)
..++..+. +...+..++|+|++.++++++.++ .|++||...++++..+ .
T Consensus 250 --~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~--------------~ 312 (369)
T 3zwl_B 250 --LQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV--------------Q 312 (369)
T ss_dssp --CCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEE--------------E
T ss_pred --Cceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhe--------------e
Confidence 45566665 778899999999999999999988 8999998888777654 3
Q ss_pred CCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1060 DNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1060 ~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
+|...|.+++|+|++++|++++.||.|+||++
T Consensus 313 ~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 313 GHFGPLNTVAISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 57788999999999999999999999999986
No 40
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.4e-35 Score=341.12 Aligned_cols=298 Identities=18% Similarity=0.240 Sum_probs=247.2
Q ss_pred chhhhccchhhhhhccccccCCCC--cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCC
Q 001366 723 NDLLRDRENLFLAQQDQEIQNPTD--RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS 800 (1092)
Q Consensus 723 ~~~l~~~~~~~~~~~~~~~~~~~~--~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D 800 (1092)
..++++|.+.+.++.+ +|++ .++++.|+++++|+....+... .+..|...|.+++|+|+|++||+|+.|
T Consensus 59 ~~~l~gH~~~V~~~~~----sp~~~~l~s~s~D~~v~iWd~~~~~~~~-----~~~~h~~~v~~~~~s~~g~~las~~~d 129 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDW----TPEKNWIVSASQDGRLIVWNALTSQKTH-----AIKLHCPWVMECAFAPNGQSVACGGLD 129 (380)
T ss_dssp EEEECCCSSCEEEEEE----CTTSSCEEEEETTSEEEEEETTTTEEEE-----EEECCCTTCCCCEECTTSSEEEECCSS
T ss_pred eecccccccEEEEEEE----cCCCCEEEEEeCCCeEEEEECCCCccce-----EEecCCCCEEEEEECCCCCEEEEeeCC
Confidence 3567888888776654 4443 5688999999999987765544 345799999999999999999999999
Q ss_pred CcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEe-----eccCccEE
Q 001366 801 KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHY-----IEHEKRAW 875 (1092)
Q Consensus 801 ~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l-----~~h~~~V~ 875 (1092)
+.|+||++.................+|...|.++.|+|+.+..|++|+.|++|++||+.+++.+..+ .+|...|.
T Consensus 130 ~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~ 209 (380)
T 3iz6_a 130 SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL 209 (380)
T ss_dssp SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE
T ss_pred CcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE
Confidence 9999999875322111222233456799999999999986778999999999999999999998887 67999999
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEecC-CCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEe
Q 001366 876 SVDFSQVHPTKLASGSDDCSVKLWNIN-EKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVL 953 (1092)
Q Consensus 876 sv~fsp~~~~~laSgs~Dg~I~iWDl~-~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l 953 (1092)
+++|++.++.+|++|+.|++|++||++ .+.++..+. |...|++++|+|++. +|++|+.|++|++||++++.. +..+
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~~-~~~~ 287 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGHQ-LQVY 287 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTEE-EEEE
T ss_pred EEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCcE-EEEe
Confidence 999998788999999999999999998 456777776 678899999999985 899999999999999998754 3444
Q ss_pred cCC-------CCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEE----cCCCCCeEEEEEecCCCEE
Q 001366 954 AGH-------EKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTF----SGHTNEKNFVGLSTADGYI 1021 (1092)
Q Consensus 954 ~~H-------~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l----~~h~~~V~~v~~spdg~~l 1021 (1092)
..+ ...|++++|+ ++.+|++|+.||.|++||+.. +.....+ .+|...|++++|+|+|.+|
T Consensus 288 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~--------~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l 359 (380)
T 3iz6_a 288 NREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLL--------AEMVLNLGTLQNSHEGRISCLGLSSDGSAL 359 (380)
T ss_dssp CCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTT--------CCEEEEECCSCSSCCCCCCEEEECSSSSEE
T ss_pred cccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCC--------CceEEEEecccCCCCCceEEEEECCCCCEE
Confidence 433 2358999999 678999999999999999973 4455555 6799999999999999999
Q ss_pred EEEecCCcEEEEeCCCCC
Q 001366 1022 ACGSESNEVYAYHRSLPM 1039 (1092)
Q Consensus 1022 asgs~Dg~I~Iwd~~~~~ 1039 (1092)
++||.|++|+||++....
T Consensus 360 ~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 360 CTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEECTTSCEEEEECCSSS
T ss_pred EEeeCCCCEEEEecCCCc
Confidence 999999999999987543
No 41
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=5.2e-38 Score=360.00 Aligned_cols=253 Identities=16% Similarity=0.129 Sum_probs=185.1
Q ss_pred hHHHhhhc--cccceeeeCCCCCc-cccccccccccccccccCchhhHhhhhhhhhhccCCC-CCCCccccceecCC-CC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNA-FKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNAS-PKPVGVGTAVVSNG-SL 287 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~ 287 (1092)
+|.+.+.+ +++|+||+|..... -......++.|+............-.++..++....| |||+.++....... ..
T Consensus 65 ~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~ 144 (353)
T 4ase_A 65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 144 (353)
T ss_dssp GEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCC
T ss_pred HeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEE
Confidence 45555544 48999999974210 0111344566555333333333445566777777755 89998877644322 12
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCccc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRIECLYIFRQIVALVDYHHTQGVTF 352 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~~~~~~~i~~qil~~l~~lHs~gIvH 352 (1092)
+ ++||||+||+|.++|+... ..+++.+++.|+.||+.||+|||+++|||
T Consensus 145 ~----------------iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiH 208 (353)
T 4ase_A 145 M----------------VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH 208 (353)
T ss_dssp E----------------EEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred E----------------EEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeec
Confidence 2 3899999999999996532 34788899999999999999999999999
Q ss_pred cCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccC
Q 001366 353 LDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPS 432 (1092)
Q Consensus 353 rDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (1092)
|||||+||||+.++.+||+|||+|+.+.....
T Consensus 209 RDLK~~NILl~~~~~vKi~DFGlar~~~~~~~------------------------------------------------ 240 (353)
T 4ase_A 209 RDLAARNILLSEKNVVKICDFGLARDIYKDPD------------------------------------------------ 240 (353)
T ss_dssp SCCSGGGEEECGGGCEEECCCGGGSCTTTCTT------------------------------------------------
T ss_pred CccCccceeeCCCCCEEECcchhhhhcccCCC------------------------------------------------
Confidence 99999999999999999999999987541100
Q ss_pred ccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCcc
Q 001366 433 KYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTS 512 (1092)
Q Consensus 433 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~ 512 (1092)
....+..+||+.|||||++.+..|+.+
T Consensus 241 -----------------------------------------------------~~~~~~~~gt~~ymAPE~l~~~~y~~k 267 (353)
T 4ase_A 241 -----------------------------------------------------YVRKGDARLPLKWMAPETIFDRVYTIQ 267 (353)
T ss_dssp -----------------------------------------------------SEEETTEEECGGGCCHHHHHHCCCCHH
T ss_pred -----------------------------------------------------ceeeccccccccccCHHHHhcCCCCCc
Confidence 001125679999999999999999999
Q ss_pred ccchhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 513 SNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 513 sDIwSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
+|||||||+||||++ | |.+..........+.....++.....++++.+|+.+||+.||.+|||+.||++|
T Consensus 268 sDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 268 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp HHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 999999999999997 3 544332333344444444444444568899999999999999999999999997
No 42
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.4e-35 Score=335.50 Aligned_cols=282 Identities=14% Similarity=0.083 Sum_probs=225.8
Q ss_pred cCCCCcE-EeEcCCeEEEEEcccceEEeeE------EeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCC
Q 001366 742 QNPTDRL-GAFFDGLCKYARYSKFEVQGML------RTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFND 814 (1092)
Q Consensus 742 ~~~~~~l-~~~~D~~~k~w~~~~~~~~~~l------~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~ 814 (1092)
++|++.+ .+..|+++++|+...+...... .......|...|++++|+|++ .|++|+.|++|+|||+....
T Consensus 38 fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~-- 114 (344)
T 4gqb_B 38 YRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAVELWELDENE-- 114 (344)
T ss_dssp ECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTS--
T ss_pred ECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCC--
Confidence 4666654 3344777777763211100000 000112356789999999985 78899999999999997522
Q ss_pred CcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCC
Q 001366 815 SVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDC 894 (1092)
Q Consensus 815 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg 894 (1092)
..........+|...|++|+|+|+ +++|++|+.||+|+|||+.+++++..+.+|...|++++|+|.+..+|++|+.|+
T Consensus 115 -~~~~~~~~~~~H~~~V~~v~~spd-g~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~ 192 (344)
T 4gqb_B 115 -TLIVSKFCKYEHDDIVSTVSVLSS-GTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDN 192 (344)
T ss_dssp -SCEEEEEEEECCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred -ceeEeeccccCCCCCEEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccc
Confidence 111222345589999999999998 899999999999999999999999999999999999999995557899999999
Q ss_pred cEEEEecCCCceeeeEe---cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC-C-C
Q 001366 895 SVKLWNINEKNSLATIK---NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD-S-G 969 (1092)
Q Consensus 895 ~I~iWDl~~~~~l~~l~---~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~-~-~ 969 (1092)
+|++||+++++++..+. +...+++++|+|++.++|++|+.|+.|++||+++++ ++..+.+|...|++|+|++ + .
T Consensus 193 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~-~~~~~~~h~~~v~~v~fsp~g~~ 271 (344)
T 4gqb_B 193 RILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS-CVLSSAVHSQCVTGLVFSPHSVP 271 (344)
T ss_dssp CEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---CCEEEECCSSCEEEEEECSSSSC
T ss_pred ccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc-EEEEEcCCCCCEEEEEEccCCCe
Confidence 99999999999888775 345699999999887899999999999999999876 4678899999999999994 3 4
Q ss_pred EEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCC-EEEEEecCCcEEEEeCCCC
Q 001366 970 TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADG-YIACGSESNEVYAYHRSLP 1038 (1092)
Q Consensus 970 ~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~-~lasgs~Dg~I~Iwd~~~~ 1038 (1092)
+|++|+.|++|+|||+.+ +. +..+.+|...|++++|+|++. +|++||.|++|++|++...
T Consensus 272 ~lasgs~D~~i~vwd~~~--------~~-~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 272 FLASLSEDCSLAVLDSSL--------SE-LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp CEEEEETTSCEEEECTTC--------CE-EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred EEEEEeCCCeEEEEECCC--------Cc-EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 689999999999999983 33 456789999999999999986 6789999999999998653
No 43
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.6e-34 Score=328.64 Aligned_cols=291 Identities=17% Similarity=0.236 Sum_probs=245.6
Q ss_pred chhhhccchhhhhhccccccCCCC--cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCC
Q 001366 723 NDLLRDRENLFLAQQDQEIQNPTD--RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS 800 (1092)
Q Consensus 723 ~~~l~~~~~~~~~~~~~~~~~~~~--~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D 800 (1092)
...+++|.+.+.++.+ +|++ .++++.|+++++|+......... +..|...|.+++|+|+|.+||+|+.|
T Consensus 57 ~~~l~gH~~~V~~~~~----s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~-----~~~~~~~v~~~~~sp~g~~lasg~~d 127 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDW----CKDKRRIVSSSQDGKVIVWDSFTTNKEHA-----VTMPCTWVMACAYAPSGCAIACGGLD 127 (354)
T ss_dssp EEEEECCSSCEEEEEE----CTTSSEEEEEETTSEEEEEETTTCCEEEE-----EECSSSCCCEEEECTTSSEEEEESTT
T ss_pred EEEecCCCCeEEEEEE----CCCCCEEEEEeCCCeEEEEECCCCCcceE-----EecCCCCEEEEEECCCCCEEEEeeCC
Confidence 3557788887776644 4444 45889999999999876554433 44688899999999999999999999
Q ss_pred CcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEe
Q 001366 801 KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFS 880 (1092)
Q Consensus 801 ~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fs 880 (1092)
++|++|++....... ..........|...|.+++|+|+ +..|++++.|++|++||+.+++.+..+.+|...|.+++|+
T Consensus 128 ~~i~v~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~-~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~ 205 (354)
T 2pbi_B 128 NKCSVYPLTFDKNEN-MAAKKKSVAMHTNYLSACSFTNS-DMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLA 205 (354)
T ss_dssp SEEEEEECCCCTTCC-SGGGCEEEEECSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CCEEEEEEecccccc-ccccceeeeccCCcEEEEEEeCC-CCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEE
Confidence 999999986422111 11223345579999999999998 8899999999999999999999999999999999999998
Q ss_pred cC-CCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecC--C
Q 001366 881 QV-HPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAG--H 956 (1092)
Q Consensus 881 p~-~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~--H 956 (1092)
|. ++..|++|+.|++|++||+++++++..+. |...|++++|+|++. +|++|+.|++|++||+++... +..+.. +
T Consensus 206 ~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~v~lwd~~~~~~-~~~~~~~~~ 283 (354)
T 2pbi_B 206 PSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGD-AFASGSDDATCRLYDLRADRE-VAIYSKESI 283 (354)
T ss_dssp CCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEE-EEEECCTTC
T ss_pred eCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcE-EEEEcCCCc
Confidence 84 35799999999999999999999998887 678899999999985 899999999999999998653 344433 3
Q ss_pred CCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEe
Q 001366 957 EKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYH 1034 (1092)
Q Consensus 957 ~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd 1034 (1092)
...+.+++|+ ++.+|++|+.|++|++||+. .+.++..+.+|...|++++|+|+|.+||+|+.|++|+||+
T Consensus 284 ~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~--------~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 284 IFGASSVDFSLSGRLLFAGYNDYTINVWDVL--------KGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEETT--------TCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ccceeEEEEeCCCCEEEEEECCCcEEEEECC--------CCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 4578999999 67789999999999999998 3566788999999999999999999999999999999995
No 44
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.5e-34 Score=329.18 Aligned_cols=304 Identities=16% Similarity=0.267 Sum_probs=248.3
Q ss_pred ecCCCCCEEEEEEcCC----CCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCC---CCEEEEE
Q 001366 775 FNNSANVICSISFDRD----EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI---KNYLASA 847 (1092)
Q Consensus 775 l~~h~~~V~sl~fspd----g~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~---~~~LaSg 847 (1092)
..+|...|++++|+|+ ...+++++.++.|+||++.... ............|...|.+++|+|+. +.+|++|
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQG--EIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGG--CEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCc--EEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 3489999999999984 4566666677799999987421 11111111122367889999999973 3589999
Q ss_pred ECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeE----ecCCceEEEEEcc
Q 001366 848 DYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATI----KNIANVCCVQFSA 923 (1092)
Q Consensus 848 s~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l----~~~~~V~sl~fsp 923 (1092)
+.||+|++||+.+++.+..+.+|...|.+++|+|.++.+|++|+.|++|++||+++++.+..+ .+...|.+++|+|
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC
Confidence 999999999999999999999999999999999977899999999999999999999998887 3678999999999
Q ss_pred CCCeEEEEEECCCeEEEEEcCCCCcc---------------------------eEEecCCCCCeEEEEEcCCCEEEEEEC
Q 001366 924 HSSHLLAFGSADYRTYCYDLRNARAP---------------------------WCVLAGHEKAVSYVKFLDSGTLVTAST 976 (1092)
Q Consensus 924 ~~~~~latgs~Dg~I~vwDlr~~~~~---------------------------~~~l~~H~~~V~~v~fs~~~~L~Sgs~ 976 (1092)
++. +|++++.|+.|++||+++.+.. .....+|...|.+++|+ +++|++++.
T Consensus 172 ~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~ 249 (366)
T 3k26_A 172 LGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSC 249 (366)
T ss_dssp TSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECS
T ss_pred CCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEec
Confidence 985 8999999999999999875321 22344599999999998 789999999
Q ss_pred CCeEEEEEcCCCCCC------CCCCCceeEEEcCCCCCeEEEEEecC--CCEEEEEecCCcEEEEeCCCCCceeeeeccc
Q 001366 977 DNKLKLWDLKRTSHT------GPSTNACSLTFSGHTNEKNFVGLSTA--DGYIACGSESNEVYAYHRSLPMPITSYKFGS 1048 (1092)
Q Consensus 977 Dg~I~vWDl~~~~~~------~~~~~~~~~~l~~h~~~V~~v~~spd--g~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~ 1048 (1092)
|+.|++||+++.... .......+..+.+|...|++++|+|+ +.+|++|+.||.|++||+..++++....
T Consensus 250 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--- 326 (366)
T 3k26_A 250 ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKC--- 326 (366)
T ss_dssp SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEE---
T ss_pred CCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccc---
Confidence 999999999864321 11122457788899999999999999 9999999999999999998877553211
Q ss_pred cCCCCCccccCCC--CCCEEEEEEeCCCCEEEEEecCCeEEEEEcC
Q 001366 1049 IDPISGKETDDDN--GLFVSSVCWRRRSDMVVAANSSGCIKVLQMV 1092 (1092)
Q Consensus 1049 ~~~i~~~~~~~~h--~~~V~sva~spd~~~Lasgs~DG~V~vW~lv 1092 (1092)
.....| ...|++++|+|++++|++|+.||.|+||++.
T Consensus 327 -------~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 327 -------TTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp -------EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred -------eEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 012333 7899999999999999999999999999973
No 45
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.1e-37 Score=380.27 Aligned_cols=254 Identities=19% Similarity=0.154 Sum_probs=199.8
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+.+.++ ++|+||++.. ...++.+|.|+.... ...+.....++..++...+||||+.+++....+...+
T Consensus 158 ~Y~i~~~lG~G~fg~V~~~~~----~~tg~~~AiK~i~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~-- 230 (573)
T 3uto_A 158 HYDIHEELGTGAFGVVHRVTE----RATGNNFAAKFVMTP-HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMV-- 230 (573)
T ss_dssp TEEEEEEEEEETTEEEEEEEE----TTTCCEEEEEEEECC-SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEE--
T ss_pred ccEEEEEEeeccCeEEEEEEE----CCCCCEEEEEEEecc-chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE--
Confidence 355555554 7899999986 334666777654322 2233445567788899999999999988876555444
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC--CcE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS--NQV 368 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~--~~v 368 (1092)
.+||||+||+|.++|......+++.+++.|++||+.||+|||++||+||||||+||||+.. +.+
T Consensus 231 --------------iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~v 296 (573)
T 3uto_A 231 --------------MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL 296 (573)
T ss_dssp --------------EEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCE
T ss_pred --------------EEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCE
Confidence 2899999999999997666678888999999999999999999999999999999999854 899
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++.+..
T Consensus 297 Kl~DFG~a~~~~~------------------------------------------------------------------- 309 (573)
T 3uto_A 297 KLIDFGLTAHLDP------------------------------------------------------------------- 309 (573)
T ss_dssp EECCCSSCEECCT-------------------------------------------------------------------
T ss_pred EEeeccceeEccC-------------------------------------------------------------------
Confidence 9999999987541
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~ 528 (1092)
...+...+||++|||||++.+..|+.++|||||||+||||++|
T Consensus 310 -------------------------------------~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G 352 (573)
T 3uto_A 310 -------------------------------------KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352 (573)
T ss_dssp -------------------------------------TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHS
T ss_pred -------------------------------------CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHC
Confidence 0112256899999999999999999999999999999999986
Q ss_pred ---CCcHHHHHHHHHhcccc--CCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhcc
Q 001366 529 ---FDSERALAAAMSDLRDR--ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~~ 591 (1092)
|.+.............. ..++.+...++.+.+||.+||++||.+|||+.|+|+||||......
T Consensus 353 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~ 420 (573)
T 3uto_A 353 LSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP 420 (573)
T ss_dssp CCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCT
T ss_pred CCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCCC
Confidence 65554444444333332 2234456678999999999999999999999999999999875443
No 46
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.5e-34 Score=360.56 Aligned_cols=303 Identities=19% Similarity=0.301 Sum_probs=245.3
Q ss_pred eecCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCc
Q 001366 774 EFNNSANVICSISFDRDE-DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV 852 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg-~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dgt 852 (1092)
.+.+|.+.|++|+|+|++ ++|+||+.|++|+||++..... ..........+|...|.+++|+|+ +.+|+||+.||+
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~--~~~~~~~~~~~h~~~v~~v~~s~~-g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDK--AYGVAQRRLTGHSHFVEDVVLSSD-GQFALSGSWDGE 453 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTT--CSCEEEEEEECCSSCEEEEEECTT-SSEEEEEETTSE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCc--ccccccceecCCCCcEEEEEECCC-CCEEEEEeCCCc
Confidence 356999999999999875 7999999999999999875211 111222345689999999999998 899999999999
Q ss_pred EEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeE----ecCCceEEEEEccCCC-e
Q 001366 853 VKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATI----KNIANVCCVQFSAHSS-H 927 (1092)
Q Consensus 853 V~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l----~~~~~V~sl~fsp~~~-~ 927 (1092)
|+|||+.+++.+..+.+|...|++++|+| ++..|+||+.|++|++||+......... .|...|.+++|+|++. .
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 532 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQP 532 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSC
T ss_pred EEEEECCCCcceeEEeCCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcc
Confidence 99999999999999999999999999999 8899999999999999998754333222 2556799999999863 4
Q ss_pred EEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCC
Q 001366 928 LLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHT 1006 (1092)
Q Consensus 928 ~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~ 1006 (1092)
++++|+.|+.|++||+++.+ ....+.+|...|++++|+ ++.+|++|+.||+|+|||+++ +.++..+.. .
T Consensus 533 ~l~s~s~d~~v~vwd~~~~~-~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~--------~~~~~~~~~-~ 602 (694)
T 3dm0_A 533 TIVSASWDKTVKVWNLSNCK-LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE--------GKKLYSLEA-N 602 (694)
T ss_dssp EEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTT--------TEEEECCBC-S
T ss_pred eEEEEeCCCeEEEEECCCCc-EEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC--------CceEEEecC-C
Confidence 89999999999999999865 467889999999999999 677999999999999999983 455555554 4
Q ss_pred CCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCC-----CCccccCCCCCCEEEEEEeCCCCEEEEEe
Q 001366 1007 NEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPI-----SGKETDDDNGLFVSSVCWRRRSDMVVAAN 1081 (1092)
Q Consensus 1007 ~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i-----~~~~~~~~h~~~V~sva~spd~~~Lasgs 1081 (1092)
..|.+++|+|++.+|++++ ++.|+|||+.++..+..+........ .+......+...|++++|+|++.+|++|+
T Consensus 603 ~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs 681 (694)
T 3dm0_A 603 SVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGY 681 (694)
T ss_dssp SCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEE
T ss_pred CcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEc
Confidence 5799999999998887766 56699999999888876653211000 01111122334689999999999999999
Q ss_pred cCCeEEEEEc
Q 001366 1082 SSGCIKVLQM 1091 (1092)
Q Consensus 1082 ~DG~V~vW~l 1091 (1092)
.||.|+||++
T Consensus 682 ~Dg~i~iW~i 691 (694)
T 3dm0_A 682 TDGVIRVWGI 691 (694)
T ss_dssp TTSEEEEEEC
T ss_pred CCCeEEEEec
Confidence 9999999997
No 47
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.4e-37 Score=377.63 Aligned_cols=248 Identities=17% Similarity=0.146 Sum_probs=186.4
Q ss_pred HHHhhhc--cccceeeeCCCCCcccccccccccccccccc-----CchhhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-----MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
|.+.+.+ ||+|+||++.. ...+..+|.|+..-.. ..........+..++...+||||+.++.....+..
T Consensus 191 f~i~k~LG~G~fG~V~la~~----~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 191 FSVHRIIGRGGFGEVYGCRK----ADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp EEEEEEEEECSSEEEEEEEE----TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred eEEEEEEecccCeEEEEEEE----CCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 4444444 37899999986 3346777777652111 11111112223456778899999998888776555
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
.++ +||||.||+|.++|...+ .+++.+++.|++||+.||+|||++|||||||||+||||+.+|
T Consensus 267 lyl----------------VmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G 329 (689)
T 3v5w_A 267 LSF----------------ILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG 329 (689)
T ss_dssp EEE----------------EECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTS
T ss_pred EEE----------------EEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCC
Confidence 553 899999999999998765 477879999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+||+|||+|+.+...
T Consensus 330 ~vKL~DFGlA~~~~~~---------------------------------------------------------------- 345 (689)
T 3v5w_A 330 HVRISDLGLACDFSKK---------------------------------------------------------------- 345 (689)
T ss_dssp CEEECCCTTCEECSSC----------------------------------------------------------------
T ss_pred CEEecccceeeecCCC----------------------------------------------------------------
Confidence 9999999999764310
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHH
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFEL 525 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~el 525 (1092)
...+.+||++|||||++.+ ..|+.++|||||||+||||
T Consensus 346 -----------------------------------------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEm 384 (689)
T 3v5w_A 346 -----------------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384 (689)
T ss_dssp -----------------------------------------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHH
T ss_pred -----------------------------------------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 0115689999999999975 5799999999999999999
Q ss_pred cCC---CCcHH--HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhh
Q 001366 526 FGR---FDSER--ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEF 588 (1092)
Q Consensus 526 l~~---f~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-----a~eiL~~~~~~~~ 588 (1092)
++| |.+.. ........+.... +......++++.+||.+||++||.+|++ +.||++||||...
T Consensus 385 LtG~~PF~~~~~~~~~~i~~~i~~~~-~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i 456 (689)
T 3v5w_A 385 LRGHSPFRQHKTKDKHEIDRMTLTMA-VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456 (689)
T ss_dssp HHSSCTTCGGGCCCHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred HhCCCCCCCCChHHHHHHHHhhcCCC-CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence 986 54321 1222222222111 1122345899999999999999999998 7999999999875
No 48
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=8.9e-34 Score=345.64 Aligned_cols=300 Identities=25% Similarity=0.333 Sum_probs=259.6
Q ss_pred cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeec
Q 001366 747 RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS 826 (1092)
Q Consensus 747 ~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~ 826 (1092)
.+++..|+.+++|+... +... .+.+|...|++++|+|++++|++++.|+.|++|+... .......+
T Consensus 236 l~~~~~d~~i~~w~~~~-~~~~-----~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~--------~~~~~~~~ 301 (577)
T 2ymu_A 236 IASASDDKTVKLWNRNG-QLLQ-----TLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG--------QLLQTLTG 301 (577)
T ss_dssp EEEEETTSCEEEECTTS-CEEE-----EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS--------CEEEEECC
T ss_pred EEEEeCCCEEEEEeCCC-CEEE-----EEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC--------cEEEEEec
Confidence 45778999999998543 2222 3568999999999999999999999999999999653 12234457
Q ss_pred CCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCce
Q 001366 827 NRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNS 906 (1092)
Q Consensus 827 h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~ 906 (1092)
|...|.+++|+|+ +.+|++++.|++|++||.. ++.+..+.+|...|++++|+| ++..|++|+.|+.|++||. +++.
T Consensus 302 h~~~v~~~~~~~~-~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~-~~~~ 377 (577)
T 2ymu_A 302 HSSSVWGVAFSPD-GQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNR-NGQL 377 (577)
T ss_dssp CSSCEEEEEECTT-SSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEET-TCCE
T ss_pred CCCCeEEEEECCC-CCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEcC-CCCE
Confidence 8999999999998 8999999999999999975 556778889999999999999 8999999999999999996 4677
Q ss_pred eeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEE
Q 001366 907 LATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWD 984 (1092)
Q Consensus 907 l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWD 984 (1092)
+..+. +...|.+++|+|++. +|++++.|+.|++||... ..+..+.+|...|.+++|+ ++.+|++++.|++|++||
T Consensus 378 ~~~~~~~~~~v~~~~~s~dg~-~l~~~~~d~~v~~~~~~~--~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~ 454 (577)
T 2ymu_A 378 LQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRNG--QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWN 454 (577)
T ss_dssp EEEEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECTTC--CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEecCCCCCeEEEEECCCCC-EEEEEeCCCEEEEEeCCC--CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 77776 678899999999995 899999999999999643 3467788999999999999 677999999999999999
Q ss_pred cCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCC
Q 001366 985 LKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLF 1064 (1092)
Q Consensus 985 l~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~ 1064 (1092)
.. +.++..+.+|...|++++|+|++++||+++.|+.|++|+. .++.+..+ .+|...
T Consensus 455 ~~---------~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~--------------~~h~~~ 510 (577)
T 2ymu_A 455 RN---------GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL--------------TGHSSS 510 (577)
T ss_dssp TT---------SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEE--------------ECCSSC
T ss_pred CC---------CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEE--------------eCCCCC
Confidence 75 4567889999999999999999999999999999999995 45554433 467889
Q ss_pred EEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1065 VSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1065 V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
|++|+|+|++++||+++.||.|+||++
T Consensus 511 v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 511 VRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred EEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 999999999999999999999999984
No 49
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.5e-33 Score=317.18 Aligned_cols=285 Identities=11% Similarity=0.180 Sum_probs=245.6
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEE
Q 001366 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKL 855 (1092)
Q Consensus 776 ~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~I 855 (1092)
.+|...|++++|+|++++|++++ |+.|+||++..... ...........|...|.+++|+|+ +++|++++.||.|++
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN--KSPVSQLDCLNRDNYIRSCKLLPD-GCTLIVGGEASTLSI 123 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC--CSCSEEEECSCTTSBEEEEEECTT-SSEEEEEESSSEEEE
T ss_pred ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCc--eeeeecccccCCCCcEEEEEEcCC-CCEEEEEcCCCcEEE
Confidence 47999999999999999999999 99999999875221 111111112268899999999998 899999999999999
Q ss_pred EECCCCc--eEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEE
Q 001366 856 WDACTGQ--TVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFG 932 (1092)
Q Consensus 856 WD~~tg~--~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latg 932 (1092)
||+.+++ ....+..|...|++++|+| ++..+++++.|+.|++||+++++.+..+. +...|.+++|+|++. +|+++
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~ 201 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGT-KLWTG 201 (337)
T ss_dssp EECCCC--EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEE
T ss_pred EECCCCCcceeeecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCC-EEEEE
Confidence 9999887 6677888999999999999 88999999999999999999999888887 678899999999985 89999
Q ss_pred ECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEE
Q 001366 933 SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNF 1011 (1092)
Q Consensus 933 s~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~ 1011 (1092)
+.|+.|++||+++.+. +..+ .|...+.+++|+ ++.+|++++.|+.|++||+.+. ....+..|...|.+
T Consensus 202 ~~dg~i~~~d~~~~~~-~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~v~~ 270 (337)
T 1gxr_A 202 GLDNTVRSWDLREGRQ-LQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP---------DKYQLHLHESCVLS 270 (337)
T ss_dssp ETTSEEEEEETTTTEE-EEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSS---------CEEEECCCSSCEEE
T ss_pred ecCCcEEEEECCCCce-Eeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC---------CeEEEcCCccceeE
Confidence 9999999999998754 3333 478889999998 6778999999999999999842 24567889999999
Q ss_pred EEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1012 VGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1012 v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
++|+|++++|++++.|+.|++|++..++.+... .|...|.+++|+|++++|++++.||.|++|++
T Consensus 271 ~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~---------------~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 271 LKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS---------------KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEE---------------ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEECCCCCEEEEecCCCcEEEEECCCCeEEEEe---------------cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 999999999999999999999999988776432 24678999999999999999999999999997
Q ss_pred C
Q 001366 1092 V 1092 (1092)
Q Consensus 1092 v 1092 (1092)
+
T Consensus 336 ~ 336 (337)
T 1gxr_A 336 I 336 (337)
T ss_dssp E
T ss_pred e
Confidence 4
No 50
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.5e-34 Score=319.26 Aligned_cols=244 Identities=17% Similarity=0.286 Sum_probs=219.7
Q ss_pred eeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecC
Q 001366 823 VEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN 902 (1092)
Q Consensus 823 ~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~ 902 (1092)
...+|...|.+++|+|+ +.+|++++.||+|+|||+.+++.+..+..|...|.+++|+| ++++|++|+.|++|++||+.
T Consensus 8 ~~~~h~~~V~~~~fsp~-~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd~~ 85 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHPT-EPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYN 85 (304)
T ss_dssp EEEEECSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEETT
T ss_pred eecCCCCceEEEEECCC-CCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeC-CCCEEEEECCCCEEEEEECC
Confidence 45678999999999998 89999999999999999999999999999999999999999 89999999999999999999
Q ss_pred CCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC--CCEEEEEECCCe
Q 001366 903 EKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD--SGTLVTASTDNK 979 (1092)
Q Consensus 903 ~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~--~~~L~Sgs~Dg~ 979 (1092)
+++++..+. |...|.+++|+|++. +|++|+.|++|++||+++.......+.+|...|.+++|++ +..|++|+.|++
T Consensus 86 ~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 86 TGEKVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (304)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSE
T ss_pred CCcEEEEEeCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCe
Confidence 999998887 678899999999985 8999999999999999987666678899999999999984 468999999999
Q ss_pred EEEEEcCCCCCCCCCCCceeEEE-cCCCCCeEEEEEec--CCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCcc
Q 001366 980 LKLWDLKRTSHTGPSTNACSLTF-SGHTNEKNFVGLST--ADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKE 1056 (1092)
Q Consensus 980 I~vWDl~~~~~~~~~~~~~~~~l-~~h~~~V~~v~~sp--dg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~ 1056 (1092)
|++||++.. .+...+ .+|...+..++|+| ++.+|++|+.|++|++||+..++++..+
T Consensus 165 v~iwd~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~------------ 224 (304)
T 2ynn_A 165 VKVWSLGQS--------TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL------------ 224 (304)
T ss_dssp EEEEETTCS--------SCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEE------------
T ss_pred EEEEECCCC--------CccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceee------------
Confidence 999999742 223333 46778899999987 6789999999999999999988776654
Q ss_pred ccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1057 TDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1057 ~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.+|...|.+++|+|++.+|++|+.||.|+||++
T Consensus 225 --~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~ 257 (304)
T 2ynn_A 225 --EGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNS 257 (304)
T ss_dssp --ECCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred --CCCCCCEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 367889999999999999999999999999996
No 51
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6.5e-34 Score=329.33 Aligned_cols=303 Identities=13% Similarity=0.125 Sum_probs=252.0
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecC---CC---CEEEEE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNY---IK---NYLASA 847 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~---~~---~~LaSg 847 (1092)
.+.+|...|++++|+| ++||+|+.|++|+||++...... ..........+|...|.+++|+|+ .+ .+|+++
T Consensus 11 ~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~ 87 (397)
T 1sq9_A 11 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNE-NPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 87 (397)
T ss_dssp ESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTC-CGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred hhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccc-cCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE
Confidence 5779999999999998 89999999999999999763211 111233445679999999999985 36 799999
Q ss_pred ECCCcEEEEECCCCce-----EEEeecc-----CccEEEEEEe----cCCCCE-EEEEeCCCcEEEEecCC------Cce
Q 001366 848 DYDGVVKLWDACTGQT-----VSHYIEH-----EKRAWSVDFS----QVHPTK-LASGSDDCSVKLWNINE------KNS 906 (1092)
Q Consensus 848 s~DgtV~IWD~~tg~~-----i~~l~~h-----~~~V~sv~fs----p~~~~~-laSgs~Dg~I~iWDl~~------~~~ 906 (1092)
+.||+|++||+.+++. +..+..| ...|++++|+ | ++.. |++|+.|+.|++||+++ ++.
T Consensus 88 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 166 (397)
T 1sq9_A 88 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLSHRLVATDVKGTTYIWKFHPFADESNSLT 166 (397)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCC-CCceEEEEEeCCCcEEEEeCCccccccccce
Confidence 9999999999998887 8889888 5899999999 8 7888 99999999999999998 777
Q ss_pred ee-----eEe--------cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecC---C---CCCeEEEEEc-
Q 001366 907 LA-----TIK--------NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAG---H---EKAVSYVKFL- 966 (1092)
Q Consensus 907 l~-----~l~--------~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~---H---~~~V~~v~fs- 966 (1092)
+. .+. +...|.+++|+|++ +|++|+.|+.|++||+++.+ ++..+.. | ...|.+++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 167 LNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLR-PLYNFESQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTE-EEEEEECCC---CCCCCEEEEEECS
T ss_pred eeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCc-eeEEEeccccccccCCccceEEECC
Confidence 66 664 46789999999998 89999999999999999865 4667777 9 9999999998
Q ss_pred CCCEEEEEECC---CeEEEEEcCCCCCCCCCCCceeEEEcC-------------CCCCeEEEEEecCCCEEEEEecCCcE
Q 001366 967 DSGTLVTASTD---NKLKLWDLKRTSHTGPSTNACSLTFSG-------------HTNEKNFVGLSTADGYIACGSESNEV 1030 (1092)
Q Consensus 967 ~~~~L~Sgs~D---g~I~vWDl~~~~~~~~~~~~~~~~l~~-------------h~~~V~~v~~spdg~~lasgs~Dg~I 1030 (1092)
++.+|++++.| +.|++||++ ...++..+.+ |...|++++|+|++.+|++|+.|+.|
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 315 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETE--------FGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKL 315 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETT--------TCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred CCCEEEEEecCCCCceEEEEECC--------CCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeE
Confidence 67889999999 999999998 3566788888 99999999999999999999999999
Q ss_pred EEEeCCCCCceeeeeccc------cCCCCCc-cccCCCCCCEEEEEEeCCC----------CEEEEEecCCeEEEEEc
Q 001366 1031 YAYHRSLPMPITSYKFGS------IDPISGK-ETDDDNGLFVSSVCWRRRS----------DMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1031 ~Iwd~~~~~~i~~~~~~~------~~~i~~~-~~~~~h~~~V~sva~spd~----------~~Lasgs~DG~V~vW~l 1091 (1092)
+|||+..++.+..+.... .+...+. .....|...|++++|+|++ .+|++|+.||.|+||++
T Consensus 316 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 316 RFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp EEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred EEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEc
Confidence 999999998888776210 0000110 1123348899999999998 79999999999999996
No 52
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.9e-34 Score=332.31 Aligned_cols=291 Identities=14% Similarity=0.077 Sum_probs=229.8
Q ss_pred ccchhhhhhccccccCCCCcE--EeEc------CCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeC
Q 001366 728 DRENLFLAQQDQEIQNPTDRL--GAFF------DGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGV 799 (1092)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~l--~~~~------D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~ 799 (1092)
.|+..+.++. ++|++.+ +++. |+.+++|+.........+.. ...+|...|++++|+|++. +++++.
T Consensus 40 ~H~~~V~~v~----fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~-~~~~~~~~V~~~~~s~d~~-~l~~s~ 113 (357)
T 4g56_B 40 CMEVQIGAVR----YRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCT-AGVQTEAGVTDVAWVSEKG-ILVASD 113 (357)
T ss_dssp CCCSEEEEEE----ECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCS-EEEECSSCEEEEEEETTTE-EEEEET
T ss_pred cccCCEEEEE----ECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEec-ccCCCCCCEEEEEEcCCCC-EEEEEC
Confidence 4555555544 4677655 3443 77788887655433322221 2346888999999999985 556788
Q ss_pred CCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEE
Q 001366 800 SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDF 879 (1092)
Q Consensus 800 D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~f 879 (1092)
|++|+|||+..... .........+|...|.+++|+|+ +++|++|+.||+|+|||+.+++++..+.+|...|++++|
T Consensus 114 dg~v~lWd~~~~~~---~~~~~~~~~~h~~~V~~v~~spd-g~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~ 189 (357)
T 4g56_B 114 SGAVELWEILEKES---LLVNKFAKYEHDDIVKTLSVFSD-GTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAA 189 (357)
T ss_dssp TSCEEEC-----------CCCCEEECCCSSCEEEEEECSS-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CCEEEEeeccccce---eEEEeeccCCCCCCEEEEEECCC-CCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 99999999875221 11122344578999999999998 899999999999999999999999999999999999999
Q ss_pred ecCCCCEEEEEeCCCcEEEEecCCCceeeeEe---cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCC
Q 001366 880 SQVHPTKLASGSDDCSVKLWNINEKNSLATIK---NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGH 956 (1092)
Q Consensus 880 sp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~---~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H 956 (1092)
++....++++++.|++|++||+++++++..+. +...+.+++|+|++..+|++|+.|+.|++||+++++ .+..+.+|
T Consensus 190 s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~-~~~~~~~~ 268 (357)
T 4g56_B 190 CPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD-SAQTSAVH 268 (357)
T ss_dssp CTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG-GCEEECCC
T ss_pred ccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCc-EeEEEecc
Confidence 99555689999999999999999998877665 456799999999987899999999999999999876 46788999
Q ss_pred CCCeEEEEEcC-C-CEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEec-CCCEEEEEecCCcEEEE
Q 001366 957 EKAVSYVKFLD-S-GTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLST-ADGYIACGSESNEVYAY 1033 (1092)
Q Consensus 957 ~~~V~~v~fs~-~-~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~sp-dg~~lasgs~Dg~I~Iw 1033 (1092)
...|++++|++ + .+|++|+.|++|+|||++ .+.++. ..+|...|++++|+| ++.+||+||.|++|++|
T Consensus 269 ~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~--------~~~~~~-~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW 339 (357)
T 4g56_B 269 SQNITGLAYSYHSSPFLASISEDCTVAVLDAD--------FSEVFR-DLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHH 339 (357)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTT--------SCEEEE-ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECC--------CCcEeE-ECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEE
Confidence 99999999983 3 478999999999999998 344444 458999999999999 78999999999999999
Q ss_pred eCCCC
Q 001366 1034 HRSLP 1038 (1092)
Q Consensus 1034 d~~~~ 1038 (1092)
++...
T Consensus 340 ~~~~~ 344 (357)
T 4g56_B 340 HLPSE 344 (357)
T ss_dssp ECC--
T ss_pred ECCCC
Confidence 98654
No 53
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.1e-34 Score=333.98 Aligned_cols=317 Identities=13% Similarity=0.109 Sum_probs=254.8
Q ss_pred CcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeee
Q 001366 746 DRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM 825 (1092)
Q Consensus 746 ~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~ 825 (1092)
..+.++.|+.+++|+....+... .+..| ..+....|++++++||+|+.|+.|+|||+... .......
T Consensus 70 ~l~~~~~d~~v~i~d~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~ 136 (420)
T 3vl1_A 70 HLYKARLDGHDFLFNTIIRDGSK-----MLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN-------LQREIDQ 136 (420)
T ss_dssp TEEEEEETTEEEEEECCSEETTT-----TSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSC-------EEEEETT
T ss_pred eEEEEEcCCcEEEEEecccceee-----EEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCc-------ceeeecc
Confidence 34677899999999976543322 23344 45666688999999999999999999998641 1222234
Q ss_pred cCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCc
Q 001366 826 SNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN 905 (1092)
Q Consensus 826 ~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~ 905 (1092)
+|...|.+++|+|+ +.+|++|+.||+|++||+.+++.+..+.+|...|++++|+| ++..|++|+.|++|++||+++++
T Consensus 137 ~h~~~v~~~~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 137 AHVSEITKLKFFPS-GEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIID-RGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp SSSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTE
T ss_pred cccCccEEEEECCC-CCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECCCCc
Confidence 78999999999998 88999999999999999999999999999999999999999 89999999999999999999999
Q ss_pred eeeeEec----CCceEE---------------------EEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCe
Q 001366 906 SLATIKN----IANVCC---------------------VQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAV 960 (1092)
Q Consensus 906 ~l~~l~~----~~~V~s---------------------l~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V 960 (1092)
++..+.. ...|.+ ++|+|++ .+|++|+.||.|++||+++.+.......+|...|
T Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v 293 (420)
T 3vl1_A 215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG-KYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSC 293 (420)
T ss_dssp EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT-EEEEEEETTSCEEEEETTTCCEEEEECCTTSSCE
T ss_pred eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC-CEEEEEcCCCeEEEEECCCCceeEEcccccCCCc
Confidence 9888862 233444 4557777 5899999999999999998876666667799999
Q ss_pred EEEEEc-CCC-EEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcC-CCCCeEEEEEecCCCEEEEEecCCcEEEEeCCC
Q 001366 961 SYVKFL-DSG-TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG-HTNEKNFVGLSTADGYIACGSESNEVYAYHRSL 1037 (1092)
Q Consensus 961 ~~v~fs-~~~-~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~-h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~ 1037 (1092)
.+++|+ ++. +|++|+.||.|++||+++.. .++..+.+ |...++++. ++++.+|++|+.|+.|++|++..
T Consensus 294 ~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~-------~~~~~~~~~~~~~v~~~~-~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 294 NSLTVDGNNANYIYAGYENGMLAQWDLRSPE-------CPVGEFLINEGTPINNVY-FAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTT-------SCSEEEEESTTSCEEEEE-EETTEEEEEETTTEEEEEEEECC
T ss_pred eeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc-------CchhhhhccCCCCceEEE-eCCCCEEEEecCCccEEEEeccC
Confidence 999999 445 89999999999999998532 33566666 677788774 45788999999999999999876
Q ss_pred CCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCC---EEEEEecCCeEEEEEc
Q 001366 1038 PMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSD---MVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1038 ~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~---~Lasgs~DG~V~vW~l 1091 (1092)
+....... ..........|...|.+++|+|++. .|++++.+|.+.+|++
T Consensus 366 ~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~ 417 (420)
T 3vl1_A 366 PESERPAI-----EFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNL 417 (420)
T ss_dssp TTCCSCEE-----CTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEES
T ss_pred CCCCccce-----eccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEec
Confidence 43222111 1112223456778899999999999 7888889999999986
No 54
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2e-33 Score=321.43 Aligned_cols=299 Identities=15% Similarity=0.127 Sum_probs=243.2
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEE
Q 001366 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKL 855 (1092)
Q Consensus 776 ~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~I 855 (1092)
..|..+|++++|+|++++||+|+.|+.|+|||+.... ........+|...|.+++|+|+ +++|++++.||+|++
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~dg~i~v 78 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK-----WVQVHELKEHNGQVTGVDWAPD-SNRIVTCGTDRNAYV 78 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE-----EEEEEEEECCSSCEEEEEEETT-TTEEEEEETTSCEEE
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc-----EEeeeeecCCCCcccEEEEeCC-CCEEEEEcCCCeEEE
Confidence 4589999999999999999999999999999987521 1123344578999999999997 899999999999999
Q ss_pred EECCCCceEEE--eeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCce---eeeEe--cCCceEEEEEccCCCeE
Q 001366 856 WDACTGQTVSH--YIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNS---LATIK--NIANVCCVQFSAHSSHL 928 (1092)
Q Consensus 856 WD~~tg~~i~~--l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~---l~~l~--~~~~V~sl~fsp~~~~~ 928 (1092)
||+.+++.... +..|...|.+++|+| ++.+|++|+.|+.|++||++.+.. ...+. +...|.+++|+|++. +
T Consensus 79 wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~ 156 (372)
T 1k8k_C 79 WTLKGRTWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV-L 156 (372)
T ss_dssp EEEETTEEEEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS-E
T ss_pred EECCCCeeeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC-E
Confidence 99988875444 467999999999999 889999999999999999998774 23332 567899999999985 8
Q ss_pred EEEEECCCeEEEEEcCC-----------------CCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCC
Q 001366 929 LAFGSADYRTYCYDLRN-----------------ARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSH 990 (1092)
Q Consensus 929 latgs~Dg~I~vwDlr~-----------------~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~ 990 (1092)
|++|+.|+.|++||++. ....+..+.+|...|.+++|+ ++.+|++++.|+.|++||++
T Consensus 157 l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~---- 232 (372)
T 1k8k_C 157 LAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD---- 232 (372)
T ss_dssp EEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG----
T ss_pred EEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC----
Confidence 99999999999999752 223567778999999999998 66799999999999999998
Q ss_pred CCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCC--CCc--eeeeec---------------c--cc
Q 001366 991 TGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSL--PMP--ITSYKF---------------G--SI 1049 (1092)
Q Consensus 991 ~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~--~~~--i~~~~~---------------~--~~ 1049 (1092)
.+.++..+..|...|++++|+|++.+|++| .|+.|++|+... +.. +..... . ..
T Consensus 233 ----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (372)
T 1k8k_C 233 ----KKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDK 307 (372)
T ss_dssp ----GTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCC
T ss_pred ----CCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccc
Confidence 456788999999999999999999988888 899999999877 421 111000 0 00
Q ss_pred CCCCC------ccccCCCCCCEEEEEEe-CCC---CEEEEEecCCeEEEEEc
Q 001366 1050 DPISG------KETDDDNGLFVSSVCWR-RRS---DMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1050 ~~i~~------~~~~~~h~~~V~sva~s-pd~---~~Lasgs~DG~V~vW~l 1091 (1092)
..... .....+|...|++++|. +++ .+|+||+.||.|+||++
T Consensus 308 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~ 359 (372)
T 1k8k_C 308 KASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 359 (372)
T ss_dssp CC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred ccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEe
Confidence 00000 12235899999999977 566 99999999999999986
No 55
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.1e-34 Score=323.46 Aligned_cols=298 Identities=17% Similarity=0.183 Sum_probs=225.8
Q ss_pred hhhccchhhhhhccccccCCCCcEEeEcCCeEEEEEcccc--eEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCc
Q 001366 725 LLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKF--EVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKK 802 (1092)
Q Consensus 725 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~D~~~k~w~~~~~--~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~ 802 (1092)
.+.+|...+.++.+ +++-.++++.|+++++|++... .....+. ..+|...|++++|+|++++||+|+.|++
T Consensus 9 ~~~~h~~~v~~~~~----s~~~las~~~D~~i~lw~~~~~~~~~~~~~~---~~~h~~~v~~v~~sp~~~~las~s~D~~ 81 (330)
T 2hes_X 9 SLKLYKEKIWSFDF----SQGILATGSTDRKIKLVSVKYDDFTLIDVLD---ETAHKKAIRSVAWRPHTSLLAAGSFDST 81 (330)
T ss_dssp EEECCSSCEEEEEE----ETTEEEEEESSSCEEEEECSSSCCEEEEEEC---TTCCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeccCCCceeeecc----CCCEEEEEcCCCEEEEEEecCCCeEEEEEEe---cCCccCCEEEEEECCCCCEEEEEeCCCc
Confidence 45667766655433 4554557889999999998642 2222111 1249999999999999999999999999
Q ss_pred EEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCC----CceEEEeeccCccEEEEE
Q 001366 803 IKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACT----GQTVSHYIEHEKRAWSVD 878 (1092)
Q Consensus 803 I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~t----g~~i~~l~~h~~~V~sv~ 878 (1092)
|+||++.................+|...|.+++|+|+ +.+|++|+.|++|+|||+.. .+++..+.+|...|.+++
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~-g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND-GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTT-SCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 9999985321111111223345679999999999998 89999999999999999943 256788899999999999
Q ss_pred EecCCCCEEEEEeCCCcEEEEecCCC--ceeeeEe-cCCceEEEEEccCC-CeEEEEEECCCeEEEEEcCCCC-------
Q 001366 879 FSQVHPTKLASGSDDCSVKLWNINEK--NSLATIK-NIANVCCVQFSAHS-SHLLAFGSADYRTYCYDLRNAR------- 947 (1092)
Q Consensus 879 fsp~~~~~laSgs~Dg~I~iWDl~~~--~~l~~l~-~~~~V~sl~fsp~~-~~~latgs~Dg~I~vwDlr~~~------- 947 (1092)
|+| ++.+|++|+.|++|++||+.++ +++..+. |...|.+++|+|++ ..+|++|+.|++|++||++...
T Consensus 161 ~~p-~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~ 239 (330)
T 2hes_X 161 WHP-SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEW 239 (330)
T ss_dssp ECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEE
T ss_pred ECC-CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcccccee
Confidence 999 8899999999999999999876 5677776 67889999999983 2489999999999999997542
Q ss_pred cceEEecC-CCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeE-EEcCCCC-CeEEEEEec--CCCEEE
Q 001366 948 APWCVLAG-HEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSL-TFSGHTN-EKNFVGLST--ADGYIA 1022 (1092)
Q Consensus 948 ~~~~~l~~-H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~-~l~~h~~-~V~~v~~sp--dg~~la 1022 (1092)
.....+.+ |...|.+++|++++.|++++.||+|+|||..... ..... .+.+|.. .|++++|+| ++.+||
T Consensus 240 ~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~------~~~~~~~~~~h~~~~v~~v~~~~~~~~~~la 313 (330)
T 2hes_X 240 VCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGE------WKVFAKRALCHGVYEINVVKWLELNGKTILA 313 (330)
T ss_dssp EEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTE------EEEEEEESCTTTTSCEEEEEEC-----CCEE
T ss_pred EEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCc------eEEEeccccccccceEEEEEEecCCCceEEE
Confidence 12334444 9999999999988899999999999999987321 02222 3357887 899999999 688999
Q ss_pred EEecCCcEEEEeCCC
Q 001366 1023 CGSESNEVYAYHRSL 1037 (1092)
Q Consensus 1023 sgs~Dg~I~Iwd~~~ 1037 (1092)
+||.|++|+||++..
T Consensus 314 s~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 314 TGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEETTSEEEEEEC--
T ss_pred EecCCCcEEEEEecc
Confidence 999999999999753
No 56
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-33 Score=320.06 Aligned_cols=304 Identities=18% Similarity=0.191 Sum_probs=234.9
Q ss_pred hhhccch-hhhhhccccccCCCCc--EEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCC
Q 001366 725 LLRDREN-LFLAQQDQEIQNPTDR--LGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSK 801 (1092)
Q Consensus 725 ~l~~~~~-~~~~~~~~~~~~~~~~--l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~ 801 (1092)
.+++|.. .+..+. ++|++. ++++.|+++++|+......... .....+|...|++++|+|+|++||+|+.|+
T Consensus 10 ~~~~h~~~~v~~l~----~sp~g~~las~~~D~~i~iw~~~~~~~~~~--~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 10 RVPAHPDSRCWFLA----WNPAGTLLASCGGDRRIRIWGTEGDSWICK--SVLSEGHQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp EECCSTTSCEEEEE----ECTTSSCEEEEETTSCEEEEEEETTEEEEE--EEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eecCCCCCcEEEEE----ECCCCCEEEEEcCCCeEEEEEcCCCcceee--eeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence 3445544 343332 455553 4678999999999765433211 112468999999999999999999999999
Q ss_pred cEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCc---eEEEeeccCccEEEEE
Q 001366 802 KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ---TVSHYIEHEKRAWSVD 878 (1092)
Q Consensus 802 ~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~---~i~~l~~h~~~V~sv~ 878 (1092)
+|+||++.... ........+|...|.+++|+|+ +++|++|+.|++|++||+.++. ++..+.+|...|.+++
T Consensus 84 ~v~iw~~~~~~-----~~~~~~~~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 157 (345)
T 3fm0_A 84 TTCIWKKNQDD-----FECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVV 157 (345)
T ss_dssp CEEEEEECCC------EEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEE
T ss_pred cEEEEEccCCC-----eEEEEEccCCCCCceEEEEeCC-CCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEE
Confidence 99999986421 1223345679999999999998 8999999999999999998763 5677889999999999
Q ss_pred EecCCCCEEEEEeCCCcEEEEecCCCce--eeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCc-------
Q 001366 879 FSQVHPTKLASGSDDCSVKLWNINEKNS--LATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA------- 948 (1092)
Q Consensus 879 fsp~~~~~laSgs~Dg~I~iWDl~~~~~--l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~------- 948 (1092)
|+| ++.+|++|+.|++|++||++++.. ..++. |...|.+++|+|++. +|++|+.|++|++||......
T Consensus 158 ~~p-~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~-~l~s~s~D~~v~iW~~~~~~~~~~~~~~ 235 (345)
T 3fm0_A 158 WHP-SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQ-RLASCSDDRTVRIWRQYLPGNEQGVACS 235 (345)
T ss_dssp ECS-SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEEECTTCTTCCCCC
T ss_pred ECC-CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCC-EEEEEeCCCeEEEeccccCCCCccceee
Confidence 999 889999999999999999988753 34555 678899999999995 899999999999999753221
Q ss_pred -------ceEEecC-CCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCc-eeEEEcCCCCCeEEEEEecCC
Q 001366 949 -------PWCVLAG-HEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNA-CSLTFSGHTNEKNFVGLSTAD 1018 (1092)
Q Consensus 949 -------~~~~l~~-H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~-~~~~l~~h~~~V~~v~~spdg 1018 (1092)
.+..+.+ |...|.+++|+ ++..|++++.|+.|++|+............. ......+|...|++++|+|++
T Consensus 236 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~ 315 (345)
T 3fm0_A 236 GSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKE 315 (345)
T ss_dssp ---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSS
T ss_pred ccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCC
Confidence 1234444 88999999999 6778999999999999999754322111111 122345899999999999997
Q ss_pred -CEEEEEecCCcEEEEeCCCCCcee
Q 001366 1019 -GYIACGSESNEVYAYHRSLPMPIT 1042 (1092)
Q Consensus 1019 -~~lasgs~Dg~I~Iwd~~~~~~i~ 1042 (1092)
.+||+||.||+|++|+...+++..
T Consensus 316 ~~~laS~s~Dg~v~~W~~~~~~~~~ 340 (345)
T 3fm0_A 316 PGLLASCSDDGEVAFWKYQRPEGLH 340 (345)
T ss_dssp TTEEEEEETTSCEEEEEECC-----
T ss_pred ceEEEEcCCCCcEEEEEecCCCCcc
Confidence 499999999999999988776544
No 57
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.1e-33 Score=324.69 Aligned_cols=285 Identities=16% Similarity=0.170 Sum_probs=231.6
Q ss_pred ecCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 775 FNNSANVICSISFDRDE-DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 775 l~~h~~~V~sl~fspdg-~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
+.+|...|++++|+|++ ++||+|+.|+.|+|||+.... ........+|...|.+++|+|+++.+|++++.|++|
T Consensus 69 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 69 ASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN-----KTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT-----CEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE
T ss_pred ccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc-----cceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE
Confidence 56899999999999999 999999999999999987521 111111236899999999999548999999999999
Q ss_pred EEEECCCCceEEEeecc---CccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEE
Q 001366 854 KLWDACTGQTVSHYIEH---EKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLL 929 (1092)
Q Consensus 854 ~IWD~~tg~~i~~l~~h---~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~l 929 (1092)
++||+.+ ..+..+..| ...|.+++|+| ++..|++|+.|+.|++||++ ++++..+. +...|.+++|+|++..+|
T Consensus 144 ~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 144 TLRDFSG-SVIQVFAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLM 220 (383)
T ss_dssp EEEETTS-CEEEEEECCCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEE
T ss_pred EEEECCC-CceEEEeccCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEE
Confidence 9999985 555566544 47899999999 88999999999999999994 67777776 678899999999996699
Q ss_pred EEEECCCeEEEEEcCCCC---cceEEecCCCCCeEEEEEcC--CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcC
Q 001366 930 AFGSADYRTYCYDLRNAR---APWCVLAGHEKAVSYVKFLD--SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG 1004 (1092)
Q Consensus 930 atgs~Dg~I~vwDlr~~~---~~~~~l~~H~~~V~~v~fs~--~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~ 1004 (1092)
++|+.|+.|++||+++.+ ..+..+ +|...|.+++|++ +.+|++++.|+.|++||+++.. +...+.+
T Consensus 221 ~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~--------~~~~~~~ 291 (383)
T 3ei3_B 221 ATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWS--------KPDQIII 291 (383)
T ss_dssp EEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTT--------SCSEEEE
T ss_pred EEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCc--------ccccccc
Confidence 999999999999999743 233444 7999999999985 6789999999999999998543 2233333
Q ss_pred C-------C----------CCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEE
Q 001366 1005 H-------T----------NEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSS 1067 (1092)
Q Consensus 1005 h-------~----------~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~s 1067 (1092)
| . ..+..++|+|++.+ +|+.|+.|+|||+.+++.+..+.. ..|...+..
T Consensus 292 ~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~------------~~~~~~~~~ 357 (383)
T 3ei3_B 292 HPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRD------------PNAAGIISL 357 (383)
T ss_dssp CCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECB------------TTBCSCCCE
T ss_pred ccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecC------------CCCCceEEE
Confidence 2 2 23444667777766 778999999999999988776541 234667888
Q ss_pred EEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1068 VCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1068 va~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
++|+|++.+|++|+ ||.|+||++
T Consensus 358 ~~~s~~g~~l~s~s-d~~i~iw~~ 380 (383)
T 3ei3_B 358 NKFSPTGDVLASGM-GFNILIWNR 380 (383)
T ss_dssp EEECTTSSEEEEEE-TTEEEEEEC
T ss_pred EEEecCccEEEEec-CCcEEEEec
Confidence 89999999999997 999999996
No 58
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.6e-34 Score=323.14 Aligned_cols=304 Identities=15% Similarity=0.231 Sum_probs=239.7
Q ss_pred ecCCCCCEEEEEEcCCCCEE-EEEeC---CCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCC--CCEEEEEE
Q 001366 775 FNNSANVICSISFDRDEDHF-AAAGV---SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI--KNYLASAD 848 (1092)
Q Consensus 775 l~~h~~~V~sl~fspdg~~l-atgg~---D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~--~~~LaSgs 848 (1092)
+.+|...|++++|+|++..+ ++|+. |+.|+||++.... .......+|...|.+++|+|+. +.+|++|+
T Consensus 14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~ 87 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD------LKLLREIEKAKPIKCGTFGATSLQQRYLATGD 87 (357)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS------EEEEEEEEESSCEEEEECTTCCTTTCCEEEEE
T ss_pred ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc------ccceeeecccCcEEEEEEcCCCCCCceEEEec
Confidence 45799999999999999755 45555 8999999987521 1223344789999999999974 68999999
Q ss_pred CCCcEEEEECCCCc-eEEEeeccCccEEEEEE------ecCCCCEEEEEeCCCcEEEEecCCCc-eeeeEec-----CCc
Q 001366 849 YDGVVKLWDACTGQ-TVSHYIEHEKRAWSVDF------SQVHPTKLASGSDDCSVKLWNINEKN-SLATIKN-----IAN 915 (1092)
Q Consensus 849 ~DgtV~IWD~~tg~-~i~~l~~h~~~V~sv~f------sp~~~~~laSgs~Dg~I~iWDl~~~~-~l~~l~~-----~~~ 915 (1092)
.||.|++||+.+++ .+..+.+|...|.+++| +| ++..|++|+.|+.|++||++++. .+..+.. ...
T Consensus 88 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 166 (357)
T 3i2n_A 88 FGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRD 166 (357)
T ss_dssp TTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCC
T ss_pred CCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCc
Confidence 99999999999988 88899999999999966 45 78899999999999999999887 6777652 237
Q ss_pred eEEEE----EccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC----CCEEEEEECCCeEEEEEcCC
Q 001366 916 VCCVQ----FSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD----SGTLVTASTDNKLKLWDLKR 987 (1092)
Q Consensus 916 V~sl~----fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~----~~~L~Sgs~Dg~I~vWDl~~ 987 (1092)
+.+++ |+|++. ++++|+.|+.|++||+++.+. .....|...|.+++|++ +.+|++++.||.|++||+++
T Consensus 167 v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 243 (357)
T 3i2n_A 167 CWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNMAL--RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT 243 (357)
T ss_dssp EEEEEEECCCC-CCC-EEEEEETTSEEEEEETTTTEE--EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEE
T ss_pred eEEEEEEeccCCCCC-EEEEEccCCeEEEEECccCce--eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcC
Confidence 88998 678885 999999999999999998764 34467899999999984 67899999999999999984
Q ss_pred CCCCCCCCCceeEEEcCCCCCeEEEEEecCCC-EEEEEecCCcEEEEeCCCCCceeeeec-cccCCCC----CccccCCC
Q 001366 988 TSHTGPSTNACSLTFSGHTNEKNFVGLSTADG-YIACGSESNEVYAYHRSLPMPITSYKF-GSIDPIS----GKETDDDN 1061 (1092)
Q Consensus 988 ~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~-~lasgs~Dg~I~Iwd~~~~~~i~~~~~-~~~~~i~----~~~~~~~h 1061 (1092)
.... .......+.+|...|++++|+|++. +|++|+.||.|++|++..+........ +...... ......+|
T Consensus 244 ~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 320 (357)
T 3i2n_A 244 QHPT---KGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLS 320 (357)
T ss_dssp EETT---TEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECC
T ss_pred CCcc---cceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccC
Confidence 3211 0111123448999999999999998 899999999999999876654322110 0000000 11234578
Q ss_pred CCCEEEEEEeCCCCEEE-EEecCCeEEEEEc
Q 001366 1062 GLFVSSVCWRRRSDMVV-AANSSGCIKVLQM 1091 (1092)
Q Consensus 1062 ~~~V~sva~spd~~~La-sgs~DG~V~vW~l 1091 (1092)
...|++++|+|++.+|+ +++.||.|+||++
T Consensus 321 ~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 321 TQPISSLDWSPDKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CCCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence 89999999999999998 8999999999996
No 59
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9e-33 Score=307.74 Aligned_cols=277 Identities=17% Similarity=0.244 Sum_probs=239.0
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.+.+|...|++++| |++.+|++|+.|+.|+|||+.. .........|...|.+++|+|+ +.+|++++.||.|
T Consensus 13 ~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~-------~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i 83 (313)
T 3odt_A 13 TLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDD-------QWLGTVVYTGQGFLNSVCYDSE-KELLLFGGKDTMI 83 (313)
T ss_dssp EECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESS-------SEEEEEEEECSSCEEEEEEETT-TTEEEEEETTSCE
T ss_pred HhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCC-------CEEEEEeecCCccEEEEEECCC-CCEEEEecCCCeE
Confidence 46799999999999 9999999999999999999865 2233445678999999999998 8999999999999
Q ss_pred EEEECCCC---ceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEE
Q 001366 854 KLWDACTG---QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLL 929 (1092)
Q Consensus 854 ~IWD~~tg---~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~l 929 (1092)
++|++... +.+..+.+|...|.+++|. +..+++++.|+.|++|| .+..+..+. +...+.++.|+|....++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l 158 (313)
T 3odt_A 84 NGVPLFATSGEDPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKF 158 (313)
T ss_dssp EEEETTCCTTSCC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEE
T ss_pred EEEEeeecCCCCcccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEE
Confidence 99998764 5677888999999999994 57999999999999999 566666666 678899999999333599
Q ss_pred EEEECCCeEEEEEcCCCCcceEEecC-CCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCC
Q 001366 930 AFGSADYRTYCYDLRNARAPWCVLAG-HEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNE 1008 (1092)
Q Consensus 930 atgs~Dg~I~vwDlr~~~~~~~~l~~-H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~ 1008 (1092)
++++.|+.|++||.. .....+.. |...|.+++|++++.+++++.|+.|++||++ .+.++..+.+|...
T Consensus 159 ~~~~~d~~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~--------~~~~~~~~~~~~~~ 227 (313)
T 3odt_A 159 LTASADKTIKLWQND---KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMH--------TGDVLRTYEGHESF 227 (313)
T ss_dssp EEEETTSCEEEEETT---EEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETT--------TCCEEEEEECCSSC
T ss_pred EEEECCCCEEEEecC---ceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECC--------chhhhhhhhcCCce
Confidence 999999999999943 33456666 9999999999977679999999999999998 45678889999999
Q ss_pred eEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEE
Q 001366 1009 KNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKV 1088 (1092)
Q Consensus 1009 V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~v 1088 (1092)
|++++|+|++ .|++|+.|+.|++||+..++.+..+. .|...|.+++|+|++. +++++.||.|++
T Consensus 228 i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~--------------~~~~~i~~~~~~~~~~-~~~~~~dg~i~i 291 (313)
T 3odt_A 228 VYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVIT--------------LPAISIWSVDCMSNGD-IIVGSSDNLVRI 291 (313)
T ss_dssp EEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEE--------------CSSSCEEEEEECTTSC-EEEEETTSCEEE
T ss_pred EEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEe--------------ccCceEEEEEEccCCC-EEEEeCCCcEEE
Confidence 9999999999 68899999999999999888776654 4566899999999998 667999999999
Q ss_pred EEc
Q 001366 1089 LQM 1091 (1092)
Q Consensus 1089 W~l 1091 (1092)
|++
T Consensus 292 w~~ 294 (313)
T 3odt_A 292 FSQ 294 (313)
T ss_dssp EES
T ss_pred EeC
Confidence 996
No 60
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.9e-33 Score=315.76 Aligned_cols=293 Identities=15% Similarity=0.173 Sum_probs=234.2
Q ss_pred hhhhccchhhhhhccccccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Q 001366 724 DLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKI 803 (1092)
Q Consensus 724 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I 803 (1092)
.++++|.+.+..+.+.. ..+.-.++++.|+++++|++.............+.+|...|.+++|+|++.+|++|+.|++|
T Consensus 11 ~~l~gH~~~V~~l~~~~-~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v 89 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSA-GQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTL 89 (319)
T ss_dssp EEECCCSSCEEEEEECS-SCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEccccceEEEEEccC-CCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEE
Confidence 45778888877664411 11233568899999999997532222122234577999999999999999999999999999
Q ss_pred EEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecC-
Q 001366 804 KIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQV- 882 (1092)
Q Consensus 804 ~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~- 882 (1092)
+|||+.+. .......+|...|.+++|+|+ +.+|++|+.|++|++||+. ++++..+.+|...|.++.|.|.
T Consensus 90 ~~wd~~~~-------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~ 160 (319)
T 3frx_A 90 RLWDVATG-------ETYQRFVGHKSDVMSVDIDKK-ASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNE 160 (319)
T ss_dssp EEEETTTT-------EEEEEEECCSSCEEEEEECTT-SCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC-
T ss_pred EEEECCCC-------CeeEEEccCCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCC
Confidence 99998752 223345689999999999998 8999999999999999985 6788889999999999999983
Q ss_pred ----CCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCC
Q 001366 883 ----HPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHE 957 (1092)
Q Consensus 883 ----~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~ 957 (1092)
++..+++|+.|++|++||+++.+....+. |...|.+++|+|++. +|++|+.|+.|++||+++.+. +..+.. .
T Consensus 161 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~-~l~s~~~dg~i~iwd~~~~~~-~~~~~~-~ 237 (319)
T 3frx_A 161 KADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGT-LIASAGKDGEIMLWNLAAKKA-MYTLSA-Q 237 (319)
T ss_dssp -----CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTEE-EEEEEC-C
T ss_pred CCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcE-EEEecC-C
Confidence 23489999999999999999988887776 678999999999995 999999999999999998753 455554 4
Q ss_pred CCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEE--------cCCCCCeEEEEEecCCCEEEEEecCCc
Q 001366 958 KAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTF--------SGHTNEKNFVGLSTADGYIACGSESNE 1029 (1092)
Q Consensus 958 ~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l--------~~h~~~V~~v~~spdg~~lasgs~Dg~ 1029 (1092)
..|.+++|++++.+++++.++.+++|++.. ...+..+ ..|...+.+++|+|+|++|++|+.|+.
T Consensus 238 ~~v~~~~~sp~~~~la~~~~~~i~v~~~~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~ 309 (319)
T 3frx_A 238 DEVFSLAFSPNRYWLAAATATGIKVFSLDP--------QYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNV 309 (319)
T ss_dssp SCEEEEEECSSSSEEEEEETTEEEEEEETT--------EEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSC
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEEeCc--------CeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCce
Confidence 689999999555444445566799999973 2223333 235677999999999999999999999
Q ss_pred EEEEeCCC
Q 001366 1030 VYAYHRSL 1037 (1092)
Q Consensus 1030 I~Iwd~~~ 1037 (1092)
|+||++.+
T Consensus 310 i~vWd~~t 317 (319)
T 3frx_A 310 IRVWQVMT 317 (319)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEee
Confidence 99999754
No 61
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.1e-34 Score=337.25 Aligned_cols=287 Identities=16% Similarity=0.174 Sum_probs=225.9
Q ss_pred cCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001366 776 NNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1092)
Q Consensus 776 ~~h~~~V~sl~fsp-dg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~ 854 (1092)
..|...|+||+|+| ++++||+|+.||+|+|||+.... ........+|.+.|++|+|+|.++.+|+|||.||+|+
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~-----~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD-----KPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCS-----CCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC-----ceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 36788999999999 56799999999999999987521 1111234579999999999986689999999999999
Q ss_pred EEECCCCceEEEeec--cCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEE
Q 001366 855 LWDACTGQTVSHYIE--HEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAF 931 (1092)
Q Consensus 855 IWD~~tg~~i~~l~~--h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~lat 931 (1092)
|||+.++........ +...+.+++|+| ++.+|++|+.||+|++||++. +.+.++. |...|++++|+|++..+|++
T Consensus 191 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 191 LQDFKGNILRVFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp EEETTSCEEEEEECCSSCSCCCCCEEEET-TTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred EeeccCCceeEEeccCCCCccEEEEEECC-CCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEE
Confidence 999977654333333 334578999999 899999999999999999975 4555555 67889999999999889999
Q ss_pred EECCCeEEEEEcCCCCcc--eEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCC
Q 001366 932 GSADYRTYCYDLRNARAP--WCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNE 1008 (1092)
Q Consensus 932 gs~Dg~I~vwDlr~~~~~--~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~ 1008 (1092)
|+.|+.|++||+++.+.. +....+|...|++++|+ ++.+|++++.||+|+|||+.++ .+...+..|...
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~--------~~~~~~~~~~~~ 340 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW--------DCPLGLIPHPHR 340 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS--------SSEEEECCCCCC
T ss_pred ecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC--------ccceEEeccccc
Confidence 999999999999976532 23346899999999999 6789999999999999999843 344444444321
Q ss_pred ------eEEEEEecCCCEEEEEe------------cCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEE-E
Q 001366 1009 ------KNFVGLSTADGYIACGS------------ESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSV-C 1069 (1092)
Q Consensus 1009 ------V~~v~~spdg~~lasgs------------~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sv-a 1069 (1092)
+..+.|+|++.++++++ .++.|++||..+++.+..+. .+|...|.++ +
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~-------------~~~~~~v~s~~~ 407 (435)
T 4e54_B 341 HFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLY-------------DPESSGISSLNE 407 (435)
T ss_dssp CCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEEC-------------CSSCCCCCCEEE
T ss_pred ccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEe-------------CCCCCcEEEEEE
Confidence 23346667666666554 34679999999888776543 3466678887 6
Q ss_pred EeCCCCEEEEEecCCeEEEEEc
Q 001366 1070 WRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1070 ~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
|+|+|.+||+|+ |+.|+||++
T Consensus 408 fspdg~~lasg~-d~~i~iW~~ 428 (435)
T 4e54_B 408 FNPMGDTLASAM-GYHILIWSQ 428 (435)
T ss_dssp ECTTSSCEEEEC-SSEEEECCC
T ss_pred ECCCCCEEEEEc-CCcEEEEEC
Confidence 999999999876 889999986
No 62
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-33 Score=321.89 Aligned_cols=286 Identities=15% Similarity=0.214 Sum_probs=242.4
Q ss_pred CCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEEc----CCCCCC-C--cccccce------eeecCCCCeEEEEEecCCCC
Q 001366 777 NSANVICSISFDRDED-HFAAAGVSKKIKIFEF----NALFND-S--VDVYYPA------VEMSNRSKLSCVCWNNYIKN 842 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~-~latgg~D~~I~Iwd~----~~~~~~-~--~~~~~~~------~~~~h~~~V~~v~~sp~~~~ 842 (1092)
.|...|++++|+|++. +||+|+.|+.|+||++ ...... . ....... ...+|...|.+++|+|+ +.
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~ 121 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHD-GN 121 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTT-SS
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCC-CC
Confidence 5678999999999999 9999999999999999 542100 0 0000000 01125779999999998 89
Q ss_pred EEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecC-Cc------
Q 001366 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNI-AN------ 915 (1092)
Q Consensus 843 ~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~-~~------ 915 (1092)
+|++++.||.|++|| .+++.+..+.+|...|.+++|+| ++..|++++.|+.|++||+.+++.+..+... ..
T Consensus 122 ~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 199 (425)
T 1r5m_A 122 SIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINA 199 (425)
T ss_dssp EEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTTEEEEEECCC---------
T ss_pred EEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceee
Confidence 999999999999999 67888999999999999999999 8899999999999999999999988888743 33
Q ss_pred ---------eEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEc
Q 001366 916 ---------VCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDL 985 (1092)
Q Consensus 916 ---------V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl 985 (1092)
+.+++|+|++ .+++++.|+.|++||+++.+ ++..+.+|...|.+++|+ ++.+|++++.|+.|++||+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~ 276 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKT-PTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHG 276 (425)
T ss_dssp ------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSS-CSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECS
T ss_pred ccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCc-eeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 8999999986 68899999999999999875 467788999999999998 6679999999999999999
Q ss_pred CCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCE
Q 001366 986 KRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFV 1065 (1092)
Q Consensus 986 ~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V 1065 (1092)
+ ...++..+.+|...|.+++|+|++ +|++++.|+.|++||+..++.+..+. .|...|
T Consensus 277 ~--------~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~--------------~~~~~i 333 (425)
T 1r5m_A 277 G--------NGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSI--------------VDGVPI 333 (425)
T ss_dssp S--------SBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEE--------------CTTCCE
T ss_pred C--------CCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecc--------------cCCccE
Confidence 8 345677888999999999999999 99999999999999998887776553 456789
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1066 SSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1066 ~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.+++|+|++.+|++++.||.|+||++
T Consensus 334 ~~~~~s~~~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 334 FAGRISQDGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred EEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 99999999999999999999999986
No 63
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-34 Score=332.38 Aligned_cols=301 Identities=12% Similarity=0.144 Sum_probs=226.8
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEE
Q 001366 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLW 856 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IW 856 (1092)
.+..+|++++|+|++++||+|+.|+.|+||++.... ........+|...|.+++|+|+ +++|++++.||+|++|
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~d~~v~vw 82 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNG-----WKHARTFSDHDKIVTCVDWAPK-SNRIVTCSQDRNAYVY 82 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTE-----EEECCCBCCCSSCEEEEEECTT-TCCEEEEETTSSEEEC
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCc-----eEEEEEEecCCceEEEEEEeCC-CCEEEEEeCCCeEEEE
Confidence 466789999999999999999999999999987520 0222334578999999999998 8899999999999999
Q ss_pred ECCCCc---eEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCc---eeeeEe--cCCceEEEEEccCCCeE
Q 001366 857 DACTGQ---TVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN---SLATIK--NIANVCCVQFSAHSSHL 928 (1092)
Q Consensus 857 D~~tg~---~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~---~l~~l~--~~~~V~sl~fsp~~~~~ 928 (1092)
|+.+++ ....+.+|...|++++|+| ++.+|++|+.|++|++||+++++ ....+. |...|.+++|+|++. +
T Consensus 83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~ 160 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNV-L 160 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSS-E
T ss_pred EcCCCCceeeeeEecccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCC-E
Confidence 999887 6778889999999999999 88999999999999999999887 356665 678899999999985 9
Q ss_pred EEEEECCCeEEEEEcCCCC-----------------cceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCC
Q 001366 929 LAFGSADYRTYCYDLRNAR-----------------APWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSH 990 (1092)
Q Consensus 929 latgs~Dg~I~vwDlr~~~-----------------~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~ 990 (1092)
|++|+.|+.|++||++... .++..+ +|...|.+++|+ ++.+|++++.|++|++||+.+...
T Consensus 161 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 161 LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 9999999999999996321 233344 899999999999 667899999999999999985321
Q ss_pred CCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCC-c-eeeeeccccC-----------------C
Q 001366 991 TGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPM-P-ITSYKFGSID-----------------P 1051 (1092)
Q Consensus 991 ~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~-~-i~~~~~~~~~-----------------~ 1051 (1092)
....+..+.+|...|++++|+|++.+|++|+.++.+ +|+..... . .......... .
T Consensus 240 ----~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (377)
T 3dwl_C 240 ----PPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGP 314 (377)
T ss_dssp ----CEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC---
T ss_pred ----cceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccc
Confidence 011267788999999999999999999999877766 66554221 0 1110000000 0
Q ss_pred C-------------------CCccccCCCCCCEEEEEEeCCC-C---EEEEEecCCeEEEEEc
Q 001366 1052 I-------------------SGKETDDDNGLFVSSVCWRRRS-D---MVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1052 i-------------------~~~~~~~~h~~~V~sva~spd~-~---~Lasgs~DG~V~vW~l 1091 (1092)
. ........|...|++|++.+.. . .|+|||.||.|+||++
T Consensus 315 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 315 VSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ----------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0 0111223489999999977644 3 6999999999999986
No 64
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.7e-36 Score=337.19 Aligned_cols=243 Identities=14% Similarity=0.092 Sum_probs=169.0
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..+|+|+||+|... +..+|.|++... ......+.++...+...+||||+.++.....+.... ..
T Consensus 12 G~G~fG~Vy~~~~~------g~~VAvK~l~~~--~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~-------~~- 75 (303)
T 3hmm_A 12 GKGRFGEVWRGKWR------GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW-------TQ- 75 (303)
T ss_dssp EECSSSEEEEEEET------TEEEEEEEECGG--GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSS-------EE-
T ss_pred eeCCCeEEEEEEEC------CEEEEEEEECcc--chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCc-------eE-
Confidence 44689999999763 456777766332 122223334555566779999999877655332110 00
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhc--------CccccCCCCCCeEEccCCcEEE
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ--------GVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~--------gIvHrDLKP~Nill~~~~~vkl 370 (1092)
..++||||+||+|.++|+.. .+++.+++.|+.|++.||+|||++ |||||||||+||||+.++.+||
T Consensus 76 ----~~lV~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki 149 (303)
T 3hmm_A 76 ----LWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp ----EEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred ----EEEEecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEE
Confidence 01389999999999999765 578889999999999999999987 9999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++........
T Consensus 150 ~DFGla~~~~~~~~~----------------------------------------------------------------- 164 (303)
T 3hmm_A 150 ADLGLAVRHDSATDT----------------------------------------------------------------- 164 (303)
T ss_dssp CCCTTCEEEETTTTE-----------------------------------------------------------------
T ss_pred EeCCCCccccCCCCc-----------------------------------------------------------------
Confidence 999999875411000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC------CCCccccchhhhHHHHH
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG------VCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~------~~t~~sDIwSLGvll~e 524 (1092)
........+||++|||||++.+. .|+.++|||||||+|||
T Consensus 165 ----------------------------------~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~E 210 (303)
T 3hmm_A 165 ----------------------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 210 (303)
T ss_dssp ----------------------------------ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHH
Confidence 00111256899999999999764 47889999999999999
Q ss_pred HcCCCCc-----------------HHHHHHHHHhccccCCCCCCCC------CChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 525 LFGRFDS-----------------ERALAAAMSDLRDRILPPSFLS------ENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 525 ll~~f~~-----------------~~~~~~~~~~~~~~~~p~~~~~------~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
|+++.+. ..........+....+.|.++. ..+.+.+|+.+||+.||++|||+.||++
T Consensus 211 l~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 211 IARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp HHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred HHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 9975110 0011222222222222222221 1235679999999999999999999987
Q ss_pred h
Q 001366 582 S 582 (1092)
Q Consensus 582 ~ 582 (1092)
.
T Consensus 291 ~ 291 (303)
T 3hmm_A 291 T 291 (303)
T ss_dssp H
T ss_pred H
Confidence 4
No 65
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.4e-33 Score=322.00 Aligned_cols=290 Identities=10% Similarity=0.088 Sum_probs=225.7
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCC-------cEEEEEcCCCCCCCcc---cccceeeecCCCCeEEEEEecCCCCEEEEE-
Q 001366 779 ANVICSISFDRDEDHFAAAGVSK-------KIKIFEFNALFNDSVD---VYYPAVEMSNRSKLSCVCWNNYIKNYLASA- 847 (1092)
Q Consensus 779 ~~~V~sl~fspdg~~latgg~D~-------~I~Iwd~~~~~~~~~~---~~~~~~~~~h~~~V~~v~~sp~~~~~LaSg- 847 (1092)
..||++++|+||+++||+||.+. +|+||++......... .........|...|.+++++. +.+++|
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~---~~~~~g~ 90 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK---GIILVGC 90 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET---TEEEEEC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC---CEEEEEE
Confidence 45899999999999999998643 5999998753221111 111122345778899998875 466655
Q ss_pred ----------ECCCcEEEEECCCCce-E---EEee-----ccCccEEEEEEecCCCCEEEE--EeCCCcEEEEecCCCce
Q 001366 848 ----------DYDGVVKLWDACTGQT-V---SHYI-----EHEKRAWSVDFSQVHPTKLAS--GSDDCSVKLWNINEKNS 906 (1092)
Q Consensus 848 ----------s~DgtV~IWD~~tg~~-i---~~l~-----~h~~~V~sv~fsp~~~~~laS--gs~Dg~I~iWDl~~~~~ 906 (1092)
+.|+++++|++.+... + .... .+...+.+|+|+| +++++++ ++.|++|+|||+.++++
T Consensus 91 ~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~ 169 (365)
T 4h5i_A 91 NENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTE 169 (365)
T ss_dssp CCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEE
T ss_pred CCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcE
Confidence 4578899999876532 1 1111 2345688999999 8888764 45799999999999999
Q ss_pred eeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcce-EEecCCCCCeEEEEEc-CCCEEEEEECCC----eE
Q 001366 907 LATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPW-CVLAGHEKAVSYVKFL-DSGTLVTASTDN----KL 980 (1092)
Q Consensus 907 l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~-~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg----~I 980 (1092)
+..+.+...|.+|+|+|+|. ++++++.+ .+.+|+..++.... ....+|...|.+++|+ ++..+++++.|+ .+
T Consensus 170 ~~~~~~~~~V~~v~fspdg~-~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i 247 (365)
T 4h5i_A 170 KFEIETRGEVKDLHFSTDGK-VVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVL 247 (365)
T ss_dssp EEEEECSSCCCEEEECTTSS-EEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEE
T ss_pred EEEeCCCCceEEEEEccCCc-eEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEE
Confidence 99999999999999999995 88888755 56667666655432 3456788999999999 677889999887 68
Q ss_pred EEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCC
Q 001366 981 KLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDD 1060 (1092)
Q Consensus 981 ~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~ 1060 (1092)
++||+..... .......+.+|...|++++|+|+|++||+|+.|++|+|||+.+++++..+. .+
T Consensus 248 ~~~~~~~~~~----~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~-------------~g 310 (365)
T 4h5i_A 248 TKISIKSGNT----SVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFK-------------QA 310 (365)
T ss_dssp EEEEEETTEE----EEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEET-------------TS
T ss_pred eeccccccee----cceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEec-------------Cc
Confidence 8999874221 112345678899999999999999999999999999999999988776543 57
Q ss_pred CCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1061 NGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1061 h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
|...|++|+|+||+++|||||.|++|+||+|
T Consensus 311 H~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 311 HSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp SSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 8999999999999999999999999999997
No 66
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-33 Score=330.33 Aligned_cols=300 Identities=15% Similarity=0.202 Sum_probs=234.5
Q ss_pred cCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001366 776 NNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1092)
Q Consensus 776 ~~h~~~V~sl~fsp-dg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~ 854 (1092)
.+|...|++++|+| ++++||+|+.|++|+|||+....... .........|...|.+++|+|+ +.+|++|+.||+|+
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~dg~i~ 136 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE--VYSSSLTYDCSSTVTQITMIPN-FDAFAVSSKDGQII 136 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC--CCSCSEEEECSSCEEEEEECTT-SSEEEEEETTSEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc--ccceeeeccCCCCEEEEEEeCC-CCEEEEEeCCCEEE
Confidence 68999999999999 99999999999999999986411110 1122334468999999999997 89999999999999
Q ss_pred EEECC---CCceEEEeec------------cCccEEEEE--EecCCCCEEEEEeCCCcEEEEecCCCceeeeEe---cCC
Q 001366 855 LWDAC---TGQTVSHYIE------------HEKRAWSVD--FSQVHPTKLASGSDDCSVKLWNINEKNSLATIK---NIA 914 (1092)
Q Consensus 855 IWD~~---tg~~i~~l~~------------h~~~V~sv~--fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~---~~~ 914 (1092)
+||+. +++.+..+.+ +...+.++. +++ ++.+|++|+.|++|++||+++++++..+. +..
T Consensus 137 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~ 215 (437)
T 3gre_A 137 VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG 215 (437)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC
T ss_pred EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC
Confidence 99994 6665554443 334455555 345 67899999999999999999999999887 467
Q ss_pred ceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEec-CCCCCeEEEEEc-----CCCEEEEEECCCeEEEEEcCCC
Q 001366 915 NVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLA-GHEKAVSYVKFL-----DSGTLVTASTDNKLKLWDLKRT 988 (1092)
Q Consensus 915 ~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~-~H~~~V~~v~fs-----~~~~L~Sgs~Dg~I~vWDl~~~ 988 (1092)
.|++++|+|++. +|++|+.||.|++||+++.+ ++..+. +|...|.+++|+ ++.+|++|+.||+|++||+++.
T Consensus 216 ~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 293 (437)
T 3gre_A 216 AVSSICIDEECC-VLILGTTRGIIDIWDIRFNV-LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKG 293 (437)
T ss_dssp CEEEEEECTTSC-EEEEEETTSCEEEEETTTTE-EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTT
T ss_pred ceEEEEECCCCC-EEEEEcCCCeEEEEEcCCcc-EEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCC
Confidence 899999999985 99999999999999999865 445554 788899999775 2448999999999999999843
Q ss_pred CCCCCCCCceeEEEcC--------------------------CCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCcee
Q 001366 989 SHTGPSTNACSLTFSG--------------------------HTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPIT 1042 (1092)
Q Consensus 989 ~~~~~~~~~~~~~l~~--------------------------h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~ 1042 (1092)
.++..+.+ |...|++++|+ ++.+|++|+.|+.|++||+..++.+.
T Consensus 294 --------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~ 364 (437)
T 3gre_A 294 --------HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSK 364 (437)
T ss_dssp --------EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCE
T ss_pred --------cEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccce
Confidence 33333332 66678899999 77899999999999999999988777
Q ss_pred eeecccc---------------------CCCCCc--cccCCCCCCEEEEEEeCC--CCEEEEEecCCeEEEEE
Q 001366 1043 SYKFGSI---------------------DPISGK--ETDDDNGLFVSSVCWRRR--SDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1043 ~~~~~~~---------------------~~i~~~--~~~~~h~~~V~sva~spd--~~~Lasgs~DG~V~vW~ 1090 (1092)
.+.-... +..... .....|...|++|+|+++ +.+|++|+.||.|+||+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 365 AVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 6642100 000000 122348899999999998 88999999999999995
No 67
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.5e-32 Score=306.69 Aligned_cols=285 Identities=18% Similarity=0.278 Sum_probs=241.3
Q ss_pred hhhhccchhhhhhccccccCCCC--cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCC
Q 001366 724 DLLRDRENLFLAQQDQEIQNPTD--RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSK 801 (1092)
Q Consensus 724 ~~l~~~~~~~~~~~~~~~~~~~~--~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~ 801 (1092)
..+.+|...+.++.+ +|++ .++++.|+.+++|+....+... .+.+|...|.+++|+|++++|++|+.|+
T Consensus 17 ~~~~gh~~~v~~~~~----s~~~~~l~s~~~dg~i~iw~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~l~s~~~d~ 87 (312)
T 4ery_A 17 FTLAGHTKAVSSVKF----SPNGEWLASSSADKLIKIWGAYDGKFEK-----TISGHKLGISDVAWSSDSNLLVSASDDK 87 (312)
T ss_dssp EEECCCSSCEEEEEE----CTTSSEEEEEETTSCEEEEETTTCCEEE-----EECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEcccCCcEEEEEE----CCCCCEEEEeeCCCeEEEEeCCCcccch-----hhccCCCceEEEEEcCCCCEEEEECCCC
Confidence 446677776665543 4544 3477899999999987665443 3568999999999999999999999999
Q ss_pred cEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEec
Q 001366 802 KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQ 881 (1092)
Q Consensus 802 ~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp 881 (1092)
.|+|||+... .......+|...|.+++|+|+ +.+|++|+.||+|++||+.+++.+..+..|...|.+++|+|
T Consensus 88 ~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 159 (312)
T 4ery_A 88 TLKIWDVSSG-------KCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 159 (312)
T ss_dssp EEEEEETTTC-------CEEEEEECCSSCEEEEEECSS-SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred EEEEEECCCC-------cEEEEEcCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC
Confidence 9999998752 222345678999999999998 89999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCceeeeEe--cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCC
Q 001366 882 VHPTKLASGSDDCSVKLWNINEKNSLATIK--NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKA 959 (1092)
Q Consensus 882 ~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~--~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~ 959 (1092)
++.+|++|+.|+.|++||+++++.+..+. +...+.+++|+|++. +|++++.|+.|++||+++++ .+..+.+|...
T Consensus 160 -~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~ 236 (312)
T 4ery_A 160 -DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDYSKGK-CLKTYTGHKNE 236 (312)
T ss_dssp -TSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSS-EEEEEETTTEEEEEETTTTE-EEEEECSSCCS
T ss_pred -CCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCc-EEEEEEecCCc
Confidence 88999999999999999999999887775 456799999999995 89999999999999999875 45677788765
Q ss_pred eEEE--EEc--CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEe--cCCcEEEE
Q 001366 960 VSYV--KFL--DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGS--ESNEVYAY 1033 (1092)
Q Consensus 960 V~~v--~fs--~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs--~Dg~I~Iw 1033 (1092)
+.++ .|+ ++.+|++|+.||.|++||+. ....+..+.+|...|.+++|+|++.+|++++ .|++|++|
T Consensus 237 ~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~--------~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W 308 (312)
T 4ery_A 237 KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ--------TKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 308 (312)
T ss_dssp SSCCCEEEECSSSCEEEECCTTSCEEEEETT--------TCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEE
T ss_pred eEEEEEEEEeCCCcEEEEECCCCEEEEEECC--------CchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEe
Confidence 4332 333 56789999999999999998 4567889999999999999999999999987 69999999
Q ss_pred eCC
Q 001366 1034 HRS 1036 (1092)
Q Consensus 1034 d~~ 1036 (1092)
+..
T Consensus 309 ~~d 311 (312)
T 4ery_A 309 KSD 311 (312)
T ss_dssp ECC
T ss_pred cCC
Confidence 753
No 68
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-33 Score=328.34 Aligned_cols=283 Identities=16% Similarity=0.294 Sum_probs=241.3
Q ss_pred CEEEEEEcCCCC-EEEEE----------eCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEEC
Q 001366 781 VICSISFDRDED-HFAAA----------GVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADY 849 (1092)
Q Consensus 781 ~V~sl~fspdg~-~latg----------g~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~ 849 (1092)
.|.+++|+|++. +||+| +.|+.|+||++..... ..+.....|...|.+++|+|+ +.+|++++.
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~-----~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~ 87 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADS-----EKPIASLQVDSKFNDLDWSHN-NKIIAGALD 87 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGG-----CSCSCCCCCSSCEEEEEECSS-SSCEEEEES
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCC-----CcEEEEEecCCceEEEEECCC-CCeEEEEcc
Confidence 467799999987 99999 8999999999875211 122334468899999999998 889999999
Q ss_pred CCcEEEEECCC----CceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCc------eeeeE----ecCCc
Q 001366 850 DGVVKLWDACT----GQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN------SLATI----KNIAN 915 (1092)
Q Consensus 850 DgtV~IWD~~t----g~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~------~l~~l----~~~~~ 915 (1092)
||.|++||+.+ .+.+..+.+|...|++++|+|.++.+|++|+.|++|++||++++. ....+ .+...
T Consensus 88 dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (416)
T 2pm9_A 88 NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDE 167 (416)
T ss_dssp SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCC
T ss_pred CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCC
Confidence 99999999987 458888999999999999999448999999999999999999886 33333 36778
Q ss_pred eEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCC------CCCeEEEEEcCC--CEEEEEECCC---eEEEEE
Q 001366 916 VCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGH------EKAVSYVKFLDS--GTLVTASTDN---KLKLWD 984 (1092)
Q Consensus 916 V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H------~~~V~~v~fs~~--~~L~Sgs~Dg---~I~vWD 984 (1092)
|.+++|+|++..+|++++.|+.|++||+++.+. +..+..| ...|.+++|++. .+|++++.|+ .|++||
T Consensus 168 v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d 246 (416)
T 2pm9_A 168 VISLAWNQSLAHVFASAGSSNFASIWDLKAKKE-VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWD 246 (416)
T ss_dssp CCEEEECSSCTTEEEEESSSSCEEEEETTTTEE-EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEE
T ss_pred eeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc-ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEe
Confidence 999999999657999999999999999998754 4555555 789999999954 4899999999 999999
Q ss_pred cCCCCCCCCCCCceeEEEc-CCCCCeEEEEEec-CCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCC
Q 001366 985 LKRTSHTGPSTNACSLTFS-GHTNEKNFVGLST-ADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNG 1062 (1092)
Q Consensus 985 l~~~~~~~~~~~~~~~~l~-~h~~~V~~v~~sp-dg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~ 1062 (1092)
+++. ..++..+. +|...|++++|+| ++.+|++|+.|+.|++||+.+++++..+. .|.
T Consensus 247 ~~~~-------~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~--------------~~~ 305 (416)
T 2pm9_A 247 LRNA-------NTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP--------------ARG 305 (416)
T ss_dssp TTST-------TSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE--------------CSS
T ss_pred CCCC-------CCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec--------------CCC
Confidence 9843 24456677 8999999999999 89999999999999999999888776653 567
Q ss_pred CCEEEEEEeCCC-CEEEEEecCCeEEEEEc
Q 001366 1063 LFVSSVCWRRRS-DMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1063 ~~V~sva~spd~-~~Lasgs~DG~V~vW~l 1091 (1092)
..|.+++|+|++ .+|++++.||.|+||++
T Consensus 306 ~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~ 335 (416)
T 2pm9_A 306 NWCFKTKFAPEAPDLFACASFDNKIEVQTL 335 (416)
T ss_dssp SCCCCEEECTTCTTEEEECCSSSEEEEEES
T ss_pred CceEEEEECCCCCCEEEEEecCCcEEEEEc
Confidence 789999999999 89999999999999996
No 69
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.8e-32 Score=307.02 Aligned_cols=253 Identities=17% Similarity=0.277 Sum_probs=210.5
Q ss_pred eecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCC--CceEEEeeccCccEEEEEEecC-CCCEEEEEeCCCcEEEEe
Q 001366 824 EMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACT--GQTVSHYIEHEKRAWSVDFSQV-HPTKLASGSDDCSVKLWN 900 (1092)
Q Consensus 824 ~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~t--g~~i~~l~~h~~~V~sv~fsp~-~~~~laSgs~Dg~I~iWD 900 (1092)
..+|...|.+++|+|+ +++||+|+.|++|+|||+.+ .+.+.++.+|...|++++|++. ++.+|+||+.|++|++||
T Consensus 5 ~~~h~~~V~~~~~s~~-g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYY-GKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp CCSCSSCEEEEEECTT-SSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred ccCCcCceEEEEECCC-CCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 4578999999999998 89999999999999999974 3678899999999999999863 478999999999999999
Q ss_pred cCCCc--eeeeEe-cCCceEEEEEccC--CCeEEEEEECCCeEEEEEcCCCCc-ceEEecCCCCCeEEEEEcCC------
Q 001366 901 INEKN--SLATIK-NIANVCCVQFSAH--SSHLLAFGSADYRTYCYDLRNARA-PWCVLAGHEKAVSYVKFLDS------ 968 (1092)
Q Consensus 901 l~~~~--~l~~l~-~~~~V~sl~fsp~--~~~~latgs~Dg~I~vwDlr~~~~-~~~~l~~H~~~V~~v~fs~~------ 968 (1092)
+++++ .+..+. |...|.+++|+|+ + .+|++|+.|+.|++||+++... ....+.+|...|.+++|++.
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g-~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYG-PMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCC-cEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 99874 445555 6788999999997 5 5899999999999999987632 24567899999999999853
Q ss_pred --------CEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCC---CEEEEEecCCcEEEEeCCC
Q 001366 969 --------GTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTAD---GYIACGSESNEVYAYHRSL 1037 (1092)
Q Consensus 969 --------~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg---~~lasgs~Dg~I~Iwd~~~ 1037 (1092)
.+|++|+.|++|+|||++.... ...+..++.+|...|++++|+|++ .+||+||.|++|+||+...
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~----~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQ----TYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTT----EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCc----eEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 5899999999999999984321 122567889999999999999985 7999999999999999876
Q ss_pred CCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1038 PMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1038 ~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
......... .....|...|++++|+|++++||+++.||.|+||++
T Consensus 239 ~~~~~~~~~---------~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 239 EQGPWKKTL---------LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp TTSCCEEEE---------SSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred CCCccceee---------eecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 431111000 011356788999999999999999999999999985
No 70
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.1e-32 Score=312.68 Aligned_cols=296 Identities=15% Similarity=0.183 Sum_probs=230.6
Q ss_pred chhhhccchhhhhhccccc-cCC-C--CcEEeEcCCeEEEEEcccceEEe--eEEeeeecCCCCCEEEEEEcCCCCEEEE
Q 001366 723 NDLLRDRENLFLAQQDQEI-QNP-T--DRLGAFFDGLCKYARYSKFEVQG--MLRTGEFNNSANVICSISFDRDEDHFAA 796 (1092)
Q Consensus 723 ~~~l~~~~~~~~~~~~~~~-~~~-~--~~l~~~~D~~~k~w~~~~~~~~~--~l~~~~l~~h~~~V~sl~fspdg~~lat 796 (1092)
..++++|.+.+..+.+... ..+ + -.++++.|+++++|++...+... ......+.+|...|++++|+|++.+|++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 3457788887766543111 012 3 34588899999999976432110 1122357799999999999999999999
Q ss_pred EeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEee---ccCcc
Q 001366 797 AGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYI---EHEKR 873 (1092)
Q Consensus 797 gg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~---~h~~~ 873 (1092)
|+.|++|+|||+... .......+|...|.+++|+|+ +.+|++++.|++|++||+. +.....+. +|...
T Consensus 94 ~s~D~~v~lwd~~~~-------~~~~~~~~h~~~v~~v~~sp~-~~~l~s~~~d~~i~~wd~~-~~~~~~~~~~~~~~~~ 164 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTG-------TTYKRFVGHQSEVYSVAFSPD-NRQILSAGAEREIKLWNIL-GECKFSSAEKENHSDW 164 (343)
T ss_dssp EETTSEEEEEETTSS-------CEEEEEECCCSCEEEEEECSS-TTEEEEEETTSCEEEEESS-SCEEEECCTTTSCSSC
T ss_pred EcCCCcEEEEECCCC-------cEEEEEcCCCCcEEEEEECCC-CCEEEEEcCCCEEEEEecc-CCceeeeecccCCCce
Confidence 999999999998752 222345679999999999998 8999999999999999997 44444443 78899
Q ss_pred EEEEEEecCCC----------CEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEE
Q 001366 874 AWSVDFSQVHP----------TKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYD 942 (1092)
Q Consensus 874 V~sv~fsp~~~----------~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwD 942 (1092)
|.+++|+| ++ .+|++++.|++|++||.. ......+. |...|.+++|+|++. +|++|+.|+.|++||
T Consensus 165 v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~~g~-~l~sgs~dg~v~iwd 241 (343)
T 2xzm_R 165 VSCVRYSP-IMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISPNGK-YIATGGKDKKLLIWD 241 (343)
T ss_dssp EEEEEECC-CCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECTTSS-EEEEEETTCEEEEEE
T ss_pred eeeeeecc-ccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECCCCC-EEEEEcCCCeEEEEE
Confidence 99999999 44 689999999999999954 55555665 678899999999995 899999999999999
Q ss_pred cCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEE-----------cCCCCCeEE
Q 001366 943 LRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTF-----------SGHTNEKNF 1011 (1092)
Q Consensus 943 lr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l-----------~~h~~~V~~ 1011 (1092)
+++...+...+ .+...|.+++|++++.+++++.|+.|++||+.+.... .+..+ .+|...|++
T Consensus 242 ~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~v~~ 314 (343)
T 2xzm_R 242 ILNLTYPQREF-DAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKA------PVCTIEAEPITKAEGQKGKNPQCTS 314 (343)
T ss_dssp SSCCSSCSEEE-ECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSC------SEEECCCCSGGGBTTBCCSCCCEEE
T ss_pred CCCCcccceee-cCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCC------ceEEeecCcchhhhhhcCCCCceEE
Confidence 97655444444 3456799999997666667778999999999854321 11122 368889999
Q ss_pred EEEecCCCEEEEEecCCcEEEEeCCC
Q 001366 1012 VGLSTADGYIACGSESNEVYAYHRSL 1037 (1092)
Q Consensus 1012 v~~spdg~~lasgs~Dg~I~Iwd~~~ 1037 (1092)
++|+|+|.+|++|+.||.|++|++.+
T Consensus 315 ~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 315 LAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp EEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred EEECCCCCeEEEecCCceEEEEEEEc
Confidence 99999999999999999999998754
No 71
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-33 Score=341.57 Aligned_cols=312 Identities=13% Similarity=0.070 Sum_probs=229.3
Q ss_pred EEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCC------CCEEEEEeCCCcEEEEEcCCCCCCCc---cc
Q 001366 748 LGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRD------EDHFAAAGVSKKIKIFEFNALFNDSV---DV 818 (1092)
Q Consensus 748 l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspd------g~~latgg~D~~I~Iwd~~~~~~~~~---~~ 818 (1092)
.+++.|+++++|++...+....+ ...+.+|...|.+++|+|+ +.+||+|+.|++|+|||+........ ..
T Consensus 177 aS~s~D~tI~iWd~~~~~~~~~~-~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~ 255 (524)
T 2j04_B 177 DKEKHSSCIQIFKMNTSTLHCVK-VQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMC 255 (524)
T ss_dssp -----CEEEEEEEEETTTCCEEE-EEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECC
T ss_pred ccCCCCceEEEEEccCCCCCceE-EEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceee
Confidence 35678999999998654322111 1235578889999999997 57999999999999999975321100 01
Q ss_pred ccc-eeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCc-eEEEeeccCccEEEE--EEecCCC-CEEEEEeCC
Q 001366 819 YYP-AVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ-TVSHYIEHEKRAWSV--DFSQVHP-TKLASGSDD 893 (1092)
Q Consensus 819 ~~~-~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~-~i~~l~~h~~~V~sv--~fsp~~~-~~laSgs~D 893 (1092)
..+ ....+|...|++++|+++ ..|++|+.||+|++||+.++. ....+.+|...|++| .|+| ++ .+|||||.|
T Consensus 256 ~~p~~~l~~h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~-~g~~~laS~S~D 332 (524)
T 2j04_B 256 EKPSLTLSLADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSD-FEDTVVSTVAVD 332 (524)
T ss_dssp CSCSEEECCTTTCEEEEEESSS--SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCT-TSCCEEEEEETT
T ss_pred cCceEEEEcCCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCC-CCCeEEEEeccC
Confidence 111 244578999999999984 589999999999999998774 456688999999999 4566 66 899999999
Q ss_pred CcEEEEecCCCceeeeEec-C--CceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCC
Q 001366 894 CSVKLWNINEKNSLATIKN-I--ANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSG 969 (1092)
Q Consensus 894 g~I~iWDl~~~~~l~~l~~-~--~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~ 969 (1092)
++|+|||+++++++.++.. . ..|.+++|+|++. .+++++.|++|++||+++... ..++.+|...|++|+|+ ++.
T Consensus 333 ~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~~~~-~~~l~gH~~~V~sva~Sp~g~ 410 (524)
T 2j04_B 333 GYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIY-SYIYSDGASSLRAVPSRAAFA-VHPLVSRETTITAIGVSRLHP 410 (524)
T ss_dssp SEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTT-EEEEECSSSEEEEEETTCTTC-CEEEEECSSCEEEEECCSSCC
T ss_pred CeEEEEECCCCCcccccccccccCcccceEeCCCcC-eEEEeCCCCcEEEEECccccc-ceeeecCCCceEEEEeCCCCC
Confidence 9999999999888777653 2 3588999999985 789999999999999998764 45677899999999999 567
Q ss_pred EEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEc-----CCCCCeEEEEEecCCCEEEEEecCCcEEEEeCC-CCCceee
Q 001366 970 TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFS-----GHTNEKNFVGLSTADGYIACGSESNEVYAYHRS-LPMPITS 1043 (1092)
Q Consensus 970 ~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~-----~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~-~~~~i~~ 1043 (1092)
.|++|+.|++|++||+... ++..+. .+...++.++|+|+++.+. ...+ +.+|... .+..+
T Consensus 411 ~l~Sgs~Dgtv~lwd~~~~---------~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~~--~~~~~~~~~g~~~-- 476 (524)
T 2j04_B 411 MVLAGSADGSLIITNAARR---------LLHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDSS--YEVYPLTVNDVSK-- 476 (524)
T ss_dssp BCEEEETTTEEECCBSCSS---------TTTCC------CCCCEEEECBCCSSSCEEE-ECCC--CCCCC----------
T ss_pred eEEEEECCCEEEEEechHh---------hccccccCccceeeeEEEEeccCCCCCeEE-ccCC--ceecccccCCcce--
Confidence 8999999999999998632 111111 1222477899999998552 2222 3333221 12211
Q ss_pred eeccccCCCCCccccCCCCCCEEEEEEeCCCC---EEEEEecCCeEEEEEc
Q 001366 1044 YKFGSIDPISGKETDDDNGLFVSSVCWRRRSD---MVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1044 ~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~---~Lasgs~DG~V~vW~l 1091 (1092)
....+|...|++|+|+|++. +||+|+.||.|+||++
T Consensus 477 ------------~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l 515 (524)
T 2j04_B 477 ------------AKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYL 515 (524)
T ss_dssp -----------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEEC
T ss_pred ------------eeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEc
Confidence 13357888999999999964 9999999999999997
No 72
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.3e-32 Score=315.67 Aligned_cols=288 Identities=19% Similarity=0.232 Sum_probs=234.3
Q ss_pred ccchhhhhhccccccCCCCcE-EeEcCCeEEEEEcccceEEeeEEeee-------------ecCCCCCEEEEEEcCCCCE
Q 001366 728 DRENLFLAQQDQEIQNPTDRL-GAFFDGLCKYARYSKFEVQGMLRTGE-------------FNNSANVICSISFDRDEDH 793 (1092)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~l-~~~~D~~~k~w~~~~~~~~~~l~~~~-------------l~~h~~~V~sl~fspdg~~ 793 (1092)
+|.+.+..+. ++|++.+ ....++.+++|+....+....+.... ...+...|++++|+|+|++
T Consensus 62 ~h~~~V~~v~----fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~ 137 (393)
T 1erj_A 62 DHTSVVCCVK----FSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 137 (393)
T ss_dssp ECSSCCCEEE----ECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSE
T ss_pred CCCCEEEEEE----ECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCE
Confidence 3555554443 4566554 34468899999988766655443211 0123345999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCcc
Q 001366 794 FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKR 873 (1092)
Q Consensus 794 latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~ 873 (1092)
||+|+.|++|+|||+... .......+|...|.+++|+|+ +.+|++++.|++|++||+.++++...+. +...
T Consensus 138 l~s~~~d~~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~~p~-~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~ 208 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENR-------KIVMILQGHEQDIYSLDYFPS-GDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDG 208 (393)
T ss_dssp EEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEE-CSSC
T ss_pred EEEEcCCCeEEEEECCCC-------cEEEEEccCCCCEEEEEEcCC-CCEEEEecCCCcEEEEECCCCeeEEEEE-cCCC
Confidence 999999999999998751 223345679999999999998 8899999999999999999999888776 5677
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe--------cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCC
Q 001366 874 AWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK--------NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRN 945 (1092)
Q Consensus 874 V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~--------~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~ 945 (1092)
+.+++|+|.++.+|++|+.|++|++||++++..+..+. |...|.+++|+|++. +|++|+.|+.|++||+++
T Consensus 209 v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 209 VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp EEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSS-EEEEEETTSEEEEEEC--
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEECCC
Confidence 99999999788999999999999999999998887762 567899999999995 899999999999999986
Q ss_pred CCc-----------ceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEE
Q 001366 946 ARA-----------PWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVG 1013 (1092)
Q Consensus 946 ~~~-----------~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~ 1013 (1092)
... ....+.+|...|.+++|+ ++.+|++|+.|++|++||+. .+.++..+.+|...|++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~--------~~~~~~~l~~h~~~v~~v~ 359 (393)
T 1erj_A 288 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKK--------SGNPLLMLQGHRNSVISVA 359 (393)
T ss_dssp -------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETT--------TCCEEEEEECCSSCEEEEE
T ss_pred CCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECC--------CCeEEEEECCCCCCEEEEE
Confidence 421 234677899999999998 67799999999999999998 4567889999999999999
Q ss_pred Eec------CCCEEEEEecCCcEEEEeCCC
Q 001366 1014 LST------ADGYIACGSESNEVYAYHRSL 1037 (1092)
Q Consensus 1014 ~sp------dg~~lasgs~Dg~I~Iwd~~~ 1037 (1092)
|++ ++.+||+||.|++|+||+...
T Consensus 360 ~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 360 VANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp ECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred ecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 986 678999999999999998643
No 73
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.6e-31 Score=316.01 Aligned_cols=320 Identities=17% Similarity=0.275 Sum_probs=268.6
Q ss_pred hhhccchhhhhhccccccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEE
Q 001366 725 LLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIK 804 (1092)
Q Consensus 725 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~ 804 (1092)
.+.+|.+.+.... ..+++..++++.|+++++|+....+... .+.+|...|.+++|+ +++|++|+.|++|+
T Consensus 113 ~l~~h~~~v~~~~---~~~g~~l~sg~~dg~i~vwd~~~~~~~~-----~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~ 182 (445)
T 2ovr_B 113 VLKGHDDHVITCL---QFCGNRIVSGSDDNTLKVWSAVTGKCLR-----TLVGHTGGVWSSQMR--DNIIISGSTDRTLK 182 (445)
T ss_dssp EEECSTTSCEEEE---EEETTEEEEEETTSCEEEEETTTCCEEE-----ECCCCSSCEEEEEEE--TTEEEEEETTSCEE
T ss_pred EecccCCCcEEEE---EEcCCEEEEEECCCcEEEEECCCCcEEE-----EEcCCCCCEEEEEec--CCEEEEEeCCCeEE
Confidence 4556665432211 1234455688999999999988766543 356899999999998 67999999999999
Q ss_pred EEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCC
Q 001366 805 IFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHP 884 (1092)
Q Consensus 805 Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~ 884 (1092)
+||+... .......+|...|.+++|++ ..|++|+.||+|++||+.+++.+..+.+|...|.+++| ++
T Consensus 183 vwd~~~~-------~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~---~~ 249 (445)
T 2ovr_B 183 VWNAETG-------ECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY---DG 249 (445)
T ss_dssp EEETTTT-------EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE---CS
T ss_pred EEECCcC-------cEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE---CC
Confidence 9998752 22234457899999999974 58999999999999999999999999999999999999 46
Q ss_pred CEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEE
Q 001366 885 TKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYV 963 (1092)
Q Consensus 885 ~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v 963 (1092)
..+++|+.|+.|++||+++++++.++. +...|.+++| ++ .++++|+.|+.|++||+++++ .+..+.+|...+.++
T Consensus 250 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~ 325 (445)
T 2ovr_B 250 RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DG-IHVVSGSLDTSIRVWDVETGN-CIHTLTGHQSLTSGM 325 (445)
T ss_dssp SCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CS-SEEEEEETTSCEEEEETTTCC-EEEEECCCCSCEEEE
T ss_pred CEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CC-CEEEEEeCCCeEEEEECCCCC-EEEEEcCCcccEEEE
Confidence 789999999999999999999998887 6778999999 45 489999999999999999876 467888999999999
Q ss_pred EEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcC---CCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCc
Q 001366 964 KFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG---HTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMP 1040 (1092)
Q Consensus 964 ~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~---h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~ 1040 (1092)
.+. +++|++|+.||.|++||++ .+.++..+.+ |...|++++|+ +.+|++|+.||.|++||+.+++.
T Consensus 326 ~~~-~~~l~~~~~dg~i~vwd~~--------~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 326 ELK-DNILVSGNADSTVKIWDIK--------TGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEF 394 (445)
T ss_dssp EEE-TTEEEEEETTSCEEEEETT--------TCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE
T ss_pred EEe-CCEEEEEeCCCeEEEEECC--------CCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCce
Confidence 985 6799999999999999998 3566777776 88899999996 57999999999999999999988
Q ss_pred eeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCe----EEEEEc
Q 001366 1041 ITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGC----IKVLQM 1091 (1092)
Q Consensus 1041 i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~----V~vW~l 1091 (1092)
+..+.. .....|...|++++|+|++.+||+|+.||. |.||++
T Consensus 395 ~~~~~~---------~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df 440 (445)
T 2ovr_B 395 IRNLVT---------LESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 440 (445)
T ss_dssp EEEEEE---------CTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred eeeeec---------cccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEEC
Confidence 876631 011356788999999999999999999998 999986
No 74
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.5e-31 Score=309.08 Aligned_cols=299 Identities=18% Similarity=0.214 Sum_probs=238.4
Q ss_pred ecCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCCCCCccccccee------eecCCCCeEEEEEecCCCCEEEEE
Q 001366 775 FNNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAV------EMSNRSKLSCVCWNNYIKNYLASA 847 (1092)
Q Consensus 775 l~~h~~~V~sl~fsp-dg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~------~~~h~~~V~~v~~sp~~~~~LaSg 847 (1092)
+.+|...|++++|+| ++++||+|+.|+.|+|||+............... ..+|...|.+++|+|+++.+|+++
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 557999999999999 9999999999999999999763221111100000 124899999999999658899999
Q ss_pred ECCCcEEEEECCCCceEEEeeccCccEEEEEEecCC--CCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccC
Q 001366 848 DYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVH--PTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAH 924 (1092)
Q Consensus 848 s~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~--~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~ 924 (1092)
+.||.|++||+.+++.+..+. +...+.++.|++.. +.++++|+.|+.|++||+++++.+..+. +...|.+++|+|+
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPR 197 (408)
T ss_dssp ETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSS
T ss_pred eCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCC
Confidence 999999999999999888876 78889999999853 3489999999999999999999988887 6788999999999
Q ss_pred CCeEEEEEECCCeEEEEEcCCCCcceEEe---------------cCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCC
Q 001366 925 SSHLLAFGSADYRTYCYDLRNARAPWCVL---------------AGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRT 988 (1092)
Q Consensus 925 ~~~~latgs~Dg~I~vwDlr~~~~~~~~l---------------~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~ 988 (1092)
+..+|++|+.||.|++||+++....+..+ .+|...|.+++|+ ++.+|++++.||.|++||+.+.
T Consensus 198 ~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 277 (408)
T 4a11_B 198 YDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNG 277 (408)
T ss_dssp CTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCC
Confidence 97789999999999999999876555554 5789999999999 6678999999999999999865
Q ss_pred CCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEE
Q 001366 989 SHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSV 1068 (1092)
Q Consensus 989 ~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sv 1068 (1092)
......... ........+........+..+++++.|+.|++||+..++++..+ .+|...|.++
T Consensus 278 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~--------------~~~~~~v~~~ 340 (408)
T 4a11_B 278 ENTLVNYGK---VCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML--------------KGHYKTVDCC 340 (408)
T ss_dssp CBCCCCCCC---CCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE--------------CCCSSCEEEE
T ss_pred ccceecccc---ccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee--------------ccCCCeEEEE
Confidence 432111100 00111111222222333556777788999999999988877655 3578899999
Q ss_pred EEeCCCCEEEEEecCCeEEEEEc
Q 001366 1069 CWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1069 a~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
+|+|++.+|++|+.||.|++|++
T Consensus 341 ~~s~~~~~l~s~~~dg~i~iw~~ 363 (408)
T 4a11_B 341 VFQSNFQELYSGSRDCNILAWVP 363 (408)
T ss_dssp EEETTTTEEEEEETTSCEEEEEE
T ss_pred EEcCCCCEEEEECCCCeEEEEeC
Confidence 99999999999999999999986
No 75
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.1e-32 Score=303.24 Aligned_cols=252 Identities=19% Similarity=0.220 Sum_probs=209.3
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecC-CCCEEEEEECCCcE
Q 001366 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNY-IKNYLASADYDGVV 853 (1092)
Q Consensus 775 l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~-~~~~LaSgs~DgtV 853 (1092)
+.+|...|++++|+|+|++||+|+.|++|+||++.... ........+|...|.+++|+++ .+.+|+||+.||+|
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~-----~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET-----HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC-----BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC-----cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 56899999999999999999999999999999986411 1223455689999999999863 37899999999999
Q ss_pred EEEECCCCc--eEEEeeccCccEEEEEEecCC-CCEEEEEeCCCcEEEEecCCCce--eeeEe-cCCceEEEEEccCC--
Q 001366 854 KLWDACTGQ--TVSHYIEHEKRAWSVDFSQVH-PTKLASGSDDCSVKLWNINEKNS--LATIK-NIANVCCVQFSAHS-- 925 (1092)
Q Consensus 854 ~IWD~~tg~--~i~~l~~h~~~V~sv~fsp~~-~~~laSgs~Dg~I~iWDl~~~~~--l~~l~-~~~~V~sl~fsp~~-- 925 (1092)
+|||+.+++ .+..+.+|...|.+++|+|.. +.+|++|+.|++|++||++++.. ...+. |...|.+++|+|++
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccc
Confidence 999998874 567788899999999999932 78999999999999999987642 23333 67789999999973
Q ss_pred ----------CeEEEEEECCCeEEEEEcCCCCc---ceEEecCCCCCeEEEEEcCC----CEEEEEECCCeEEEEEcCCC
Q 001366 926 ----------SHLLAFGSADYRTYCYDLRNARA---PWCVLAGHEKAVSYVKFLDS----GTLVTASTDNKLKLWDLKRT 988 (1092)
Q Consensus 926 ----------~~~latgs~Dg~I~vwDlr~~~~---~~~~l~~H~~~V~~v~fs~~----~~L~Sgs~Dg~I~vWDl~~~ 988 (1092)
..+|++|+.|+.|++||+++... ....+.+|...|.+|+|++. .+|++++.|++|+|||++..
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 25899999999999999987653 34578899999999999954 68999999999999999742
Q ss_pred CCCCCCCCceeEEE--cCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCC
Q 001366 989 SHTGPSTNACSLTF--SGHTNEKNFVGLSTADGYIACGSESNEVYAYHRS 1036 (1092)
Q Consensus 989 ~~~~~~~~~~~~~l--~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~ 1036 (1092)
.. ......+ ..|...|++++|+|+|.+||+|+.|+.|+||+..
T Consensus 240 ~~-----~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 240 QG-----PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp TS-----CCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CC-----ccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 11 0111223 4688899999999999999999999999999865
No 76
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.2e-32 Score=320.26 Aligned_cols=301 Identities=17% Similarity=0.249 Sum_probs=231.5
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCC----CCcccccceeeecCC------------CCeEEEEEecCC
Q 001366 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFN----DSVDVYYPAVEMSNR------------SKLSCVCWNNYI 840 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~----~~~~~~~~~~~~~h~------------~~V~~v~~sp~~ 840 (1092)
.|.+.|++++|+|+|++||+|+.|+.|+||++..... ............+|. ..|++++|+|+.
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 4678999999999999999999999999999875321 001111233455787 889999999982
Q ss_pred C-CEEEEEECCCcEEEEECCCCceE---------------------------------------EE-eeccCccEEEEEE
Q 001366 841 K-NYLASADYDGVVKLWDACTGQTV---------------------------------------SH-YIEHEKRAWSVDF 879 (1092)
Q Consensus 841 ~-~~LaSgs~DgtV~IWD~~tg~~i---------------------------------------~~-l~~h~~~V~sv~f 879 (1092)
. .+|++++.||+|++||+.+++.. .. ..+|...|++++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 2 79999999999999998764432 12 3579999999999
Q ss_pred ecCCCCEEEEEeCCCcEEEEecC-CCceeeeE--------ecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCc--
Q 001366 880 SQVHPTKLASGSDDCSVKLWNIN-EKNSLATI--------KNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA-- 948 (1092)
Q Consensus 880 sp~~~~~laSgs~Dg~I~iWDl~-~~~~l~~l--------~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~-- 948 (1092)
+| ++.+|++| .|++|++||++ .+.++..+ .+...|++++|+|++..+|++|+.||.|++||+++.+.
T Consensus 186 ~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 186 NS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp CT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred cC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 99 89999998 79999999999 44455533 36678999999999855999999999999999998764
Q ss_pred -ceEEecCCCC------------CeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCC------
Q 001366 949 -PWCVLAGHEK------------AVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNE------ 1008 (1092)
Q Consensus 949 -~~~~l~~H~~------------~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~------ 1008 (1092)
....+.+|.. .|.+++|+ ++.+|++++. +.|++||++.. +.++..+.+|...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~-------~~~~~~~~~~~~~~~~l~~ 335 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNME-------NRPVETYQVHEYLRSKLCS 335 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCC-------SSCSCCEESCGGGTTTHHH
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCC-------ccccceeeccccccccccc
Confidence 2577888876 89999999 6678888888 99999999841 4456677777532
Q ss_pred ---------eEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCc--------------------cccC
Q 001366 1009 ---------KNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGK--------------------ETDD 1059 (1092)
Q Consensus 1009 ---------V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~--------------------~~~~ 1059 (1092)
+..++|+|++.+|++|+.|+.|+|||+.+++.+.... ...+.... ....
T Consensus 336 ~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (447)
T 3dw8_B 336 LYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEA--SRENNKPRTVLKPRKVCASGKRKKDEISVDSL 413 (447)
T ss_dssp HHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEEC--CSTTCCTTCBCCCCCEECSSCCCTTCEEGGGC
T ss_pred cccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeee--cccccccccccCCccccccCCccccccccccc
Confidence 2349999999999999999999999999887664221 11111100 0112
Q ss_pred CCCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1060 DNGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1060 ~h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
++...|..++|+|++.+||+|+.++ +.+|.
T Consensus 414 ~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 414 DFNKKILHTAWHPKENIIAVATTNN-LYIFQ 443 (447)
T ss_dssp CTTSCCCEEEECSSSSEEEEECSSC-EEEEE
T ss_pred ccCCceeEEEECCCCCEEEEEecce-eeeec
Confidence 4556799999999999999998886 66664
No 77
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.1e-31 Score=313.63 Aligned_cols=320 Identities=15% Similarity=0.231 Sum_probs=259.0
Q ss_pred hhhhccchhhhhhccccccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Q 001366 724 DLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKI 803 (1092)
Q Consensus 724 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I 803 (1092)
..+++|.+.+.... ..+++-.++++.|+++++|+....+... .+.+|...|.+++|+|++ +|++|+.|++|
T Consensus 115 ~~l~~h~~~v~~~~---~~~~~~l~sgs~dg~i~vwd~~~~~~~~-----~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i 185 (464)
T 3v7d_B 115 TTLRGHMTSVITCL---QFEDNYVITGADDKMIRVYDSINKKFLL-----QLSGHDGGVWALKYAHGG-ILVSGSTDRTV 185 (464)
T ss_dssp EEEECCSSSCEEEE---EEETTEEEEEETTSCEEEEETTTTEEEE-----EECCCSSCEEEEEECSTT-EEEEEETTSCE
T ss_pred EEEcCCCCCcEEEE---EECCCEEEEEcCCCcEEEEECCCCcEEE-----EEeCCCcCEEEEEEcCCC-EEEEEeCCCCE
Confidence 34566665442211 1234456688999999999988776544 355899999999999988 99999999999
Q ss_pred EEEEcCCCCCCCcccccceeeecCCCCeEEEEEecC-CCCEEEEEECCCcEEEEECCCCc--------------------
Q 001366 804 KIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNY-IKNYLASADYDGVVKLWDACTGQ-------------------- 862 (1092)
Q Consensus 804 ~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~-~~~~LaSgs~DgtV~IWD~~tg~-------------------- 862 (1092)
+|||+.+. .......+|...|.+++|++. ++.+|++|+.||+|++||+.++.
T Consensus 186 ~vwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (464)
T 3v7d_B 186 RVWDIKKG-------CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEE 258 (464)
T ss_dssp EEEETTTT-------EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGG
T ss_pred EEEECCCC-------cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCC
Confidence 99998752 223345579999999999852 36899999999999999998765
Q ss_pred ---eEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeE
Q 001366 863 ---TVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRT 938 (1092)
Q Consensus 863 ---~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I 938 (1092)
.+..+.+|...|.++. + ++..+++|+.|+.|++||+++++++..+. +...|.+++|+|++. ++++|+.||.|
T Consensus 259 ~~~~~~~~~~~~~~v~~~~--~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~sg~~dg~i 334 (464)
T 3v7d_B 259 NPYFVGVLRGHMASVRTVS--G-HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERK-RCISASMDTTI 334 (464)
T ss_dssp CTTEEEEECCCSSCEEEEE--E-ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTT-EEEEEETTSCE
T ss_pred CeEEEEEccCccceEEEEc--C-CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCC-EEEEEeCCCcE
Confidence 2567788999998874 4 67899999999999999999999998887 678899999999985 89999999999
Q ss_pred EEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCC
Q 001366 939 YCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTAD 1018 (1092)
Q Consensus 939 ~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg 1018 (1092)
++||+++++ ++..+.+|...|.+++|+ +.+|++++.||+|++||+.+ ....... .|...+..++|++++
T Consensus 335 ~vwd~~~~~-~~~~~~~h~~~v~~~~~~-~~~l~s~s~dg~v~vwd~~~--------~~~~~~~-~~~~~~~~~~~~~~~ 403 (464)
T 3v7d_B 335 RIWDLENGE-LMYTLQGHTALVGLLRLS-DKFLVSAAADGSIRGWDAND--------YSRKFSY-HHTNLSAITTFYVSD 403 (464)
T ss_dssp EEEETTTTE-EEEEECCCSSCEEEEEEC-SSEEEEEETTSEEEEEETTT--------CCEEEEE-ECTTCCCEEEEEECS
T ss_pred EEEECCCCc-EEEEEeCCCCcEEEEEEc-CCEEEEEeCCCcEEEEECCC--------Cceeeee-cCCCCccEEEEEeCC
Confidence 999999875 567889999999999997 68999999999999999984 2333333 366778889999999
Q ss_pred CEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEE
Q 001366 1019 GYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVL 1089 (1092)
Q Consensus 1019 ~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW 1089 (1092)
.+|++|+ |+.|++||+.+++.+.... ..|...|++++|+ ...++++++.||.+.+|
T Consensus 404 ~~l~~~~-dg~i~iwd~~~g~~~~~~~-------------~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 404 NILVSGS-ENQFNIYNLRSGKLVHANI-------------LKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp SEEEEEE-TTEEEEEETTTCCEEESCT-------------TTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred CEEEEec-CCeEEEEECCCCcEEehhh-------------ccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 9999999 8999999999998776432 3457789999998 44555566677766554
No 78
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.8e-32 Score=346.58 Aligned_cols=330 Identities=11% Similarity=0.095 Sum_probs=249.3
Q ss_pred CCCC-cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCccc---
Q 001366 743 NPTD-RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDV--- 818 (1092)
Q Consensus 743 ~~~~-~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~--- 818 (1092)
.|.. .++++.|+++++|++...+....+. |...|++++|+|++++|++|+.|++|++||+..........
T Consensus 67 spg~~L~S~s~D~~v~lWd~~~~~~~~~~~------~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~ 140 (902)
T 2oaj_A 67 VKGIYLVVINAKDTVYVLSLYSQKVLTTVF------VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNL 140 (902)
T ss_dssp ETTTEEEEEETTCEEEEEETTTCSEEEEEE------CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCH
T ss_pred cCCCEEEEEECcCeEEEEECCCCcEEEEEc------CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccc
Confidence 3434 5678899999999998766554432 56789999999999999999999999999987522100000
Q ss_pred ccc-eeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeecc------------------CccEEEEEE
Q 001366 819 YYP-AVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEH------------------EKRAWSVDF 879 (1092)
Q Consensus 819 ~~~-~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h------------------~~~V~sv~f 879 (1092)
... ....+|.+.|.+++|+|+++..|++|+.||+| |||+.+++++..+..| ...|++++|
T Consensus 141 ~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~f 219 (902)
T 2oaj_A 141 QKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLY 219 (902)
T ss_dssp HHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEE
T ss_pred cccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEE
Confidence 000 12246889999999999756799999999999 9999999998888766 467999999
Q ss_pred ecCCCCEEEEEeCCCcEEEEecCCCceeee--Ee----c-------------CCceEEEEE-------------------
Q 001366 880 SQVHPTKLASGSDDCSVKLWNINEKNSLAT--IK----N-------------IANVCCVQF------------------- 921 (1092)
Q Consensus 880 sp~~~~~laSgs~Dg~I~iWDl~~~~~l~~--l~----~-------------~~~V~sl~f------------------- 921 (1092)
+| ++.+|++|+.|++|++||+++++++.. +. + ...|++++|
T Consensus 220 sp-dg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~ 298 (902)
T 2oaj_A 220 HP-NSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSIS 298 (902)
T ss_dssp CT-TSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECST
T ss_pred cC-CCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCC
Confidence 99 899999999999999999987655431 10 0 111222222
Q ss_pred --------------------------------------------------------------------------------
Q 001366 922 -------------------------------------------------------------------------------- 921 (1092)
Q Consensus 922 -------------------------------------------------------------------------------- 921 (1092)
T Consensus 299 ~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~ 378 (902)
T 2oaj_A 299 RGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIET 378 (902)
T ss_dssp TSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEE
T ss_pred CCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEE
Confidence
Q ss_pred -----------------------------------------------------------------ccCCCeEEEEEECCC
Q 001366 922 -----------------------------------------------------------------SAHSSHLLAFGSADY 936 (1092)
Q Consensus 922 -----------------------------------------------------------------sp~~~~~latgs~Dg 936 (1092)
+|++ .+|++|+.|+
T Consensus 379 ~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg-~~laSgs~Dg 457 (902)
T 2oaj_A 379 MLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYG-TAFITGHSNG 457 (902)
T ss_dssp EETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEE-EEEEEEETTS
T ss_pred EECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccC-cEEEEecCCC
Confidence 2333 3677777788
Q ss_pred eEEEEEcCCCCcc---eEE--e-----cCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCC------------
Q 001366 937 RTYCYDLRNARAP---WCV--L-----AGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGP------------ 993 (1092)
Q Consensus 937 ~I~vwDlr~~~~~---~~~--l-----~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~------------ 993 (1092)
+|++||+.++... ... + .+|...|.+|+|+ ++.+|++|+.||+|+|||+.+....+.
T Consensus 458 tVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~ 537 (902)
T 2oaj_A 458 SVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMN 537 (902)
T ss_dssp EEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------
T ss_pred cEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCccccee
Confidence 8888887665321 011 1 1788999999999 778999999999999999975421000
Q ss_pred -------------------------CCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccc
Q 001366 994 -------------------------STNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGS 1048 (1092)
Q Consensus 994 -------------------------~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~ 1048 (1092)
....++.++.+|...|++++|||+| +||+|+.|++|++||+..+..+.....
T Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~-- 614 (902)
T 2oaj_A 538 FRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENI-- 614 (902)
T ss_dssp CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEG--
T ss_pred eeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeeh--
Confidence 0013577888999999999999999 999999999999999887766543221
Q ss_pred cCCCCCcccc-CCCCCCEEEEEEe-----CCC---CEEEEEecCCeEEEEEc
Q 001366 1049 IDPISGKETD-DDNGLFVSSVCWR-----RRS---DMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1049 ~~~i~~~~~~-~~h~~~V~sva~s-----pd~---~~Lasgs~DG~V~vW~l 1091 (1092)
... .+|...|++|+|+ ||| .+|++|+.||+|++|++
T Consensus 615 -------~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 615 -------REISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp -------GGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred -------hHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 122 3789999999999 885 89999999999999997
No 79
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8.7e-32 Score=303.88 Aligned_cols=301 Identities=15% Similarity=0.185 Sum_probs=239.6
Q ss_pred hhhhccchhhhhhccccccCCC---CcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCC
Q 001366 724 DLLRDRENLFLAQQDQEIQNPT---DRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS 800 (1092)
Q Consensus 724 ~~l~~~~~~~~~~~~~~~~~~~---~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D 800 (1092)
.+|++|.+.+.++.+ +|+ -.++++.|+++++|++...+.........+.+|...|++++|+|++++|++|+.|
T Consensus 32 ~tL~GH~~~V~~v~~----sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d 107 (340)
T 4aow_A 32 GTLKGHNGWVTQIAT----TPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 107 (340)
T ss_dssp EEECCCSSCEEEEEE----CTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEECCccCCEEEEEE----eCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence 468899998887754 443 2457899999999998765544344445678999999999999999999999999
Q ss_pred CcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCce-EEEeeccCccEEEEEE
Q 001366 801 KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQT-VSHYIEHEKRAWSVDF 879 (1092)
Q Consensus 801 ~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~-i~~l~~h~~~V~sv~f 879 (1092)
+.|++|+.... ........+...+.++.++++ +.+|++++.|+.+++||+..... ...+.+|...+.+++|
T Consensus 108 ~~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~ 179 (340)
T 4aow_A 108 GTLRLWDLTTG-------TTTRRFVGHTKDVLSVAFSSD-NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRF 179 (340)
T ss_dssp SEEEEEETTTT-------EEEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEE
T ss_pred ccceEEeeccc-------ceeeeecCCCCceeEEEEeec-CccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEE
Confidence 99999998651 222334456778888999987 88999999999999999876653 4445689999999999
Q ss_pred ecCC-CCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCC
Q 001366 880 SQVH-PTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHE 957 (1092)
Q Consensus 880 sp~~-~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~ 957 (1092)
++.. ..++++++.|++|++||+++++.+..+. +...|++++|+|++. +|++|+.|+.|++||+++.+. +..+.. .
T Consensus 180 ~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~~~~-~~~~~~-~ 256 (340)
T 4aow_A 180 SPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNEGKH-LYTLDG-G 256 (340)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTEE-EEEEEC-S
T ss_pred ccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEeccCce-eeeecC-C
Confidence 8843 3568999999999999999999988887 678899999999985 999999999999999998754 455544 4
Q ss_pred CCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCC-CCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCC
Q 001366 958 KAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPS-TNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRS 1036 (1092)
Q Consensus 958 ~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~-~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~ 1036 (1092)
..|.++.|++++.+++++.|+.|++||++........ .........+|...|++++|+|+|++|++|+.||.|+||++.
T Consensus 257 ~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 257 DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred ceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 6799999998888999999999999999843211000 111223345789999999999999999999999999999988
Q ss_pred CCC
Q 001366 1037 LPM 1039 (1092)
Q Consensus 1037 ~~~ 1039 (1092)
+|+
T Consensus 337 tGt 339 (340)
T 4aow_A 337 IGT 339 (340)
T ss_dssp C--
T ss_pred CcC
Confidence 764
No 80
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=9.3e-32 Score=304.25 Aligned_cols=282 Identities=10% Similarity=0.088 Sum_probs=240.3
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCC-EEEEEECCCcE
Q 001366 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKN-YLASADYDGVV 853 (1092)
Q Consensus 775 l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~-~LaSgs~DgtV 853 (1092)
..+|...|++++|+|++++|++|+.|+.|+||++..... .........|...|.+++|+|+ +. +|++|+.||.|
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i 81 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK----NVDLLQSLRYKHPLLCCNFIDN-TDLQIYVGTVQGEI 81 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT----EEEEEEEEECSSCEEEEEEEES-SSEEEEEEETTSCE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCc----cccceeeeecCCceEEEEECCC-CCcEEEEEcCCCeE
Confidence 347999999999999999999999999999999875210 1112344578999999999998 88 99999999999
Q ss_pred EEEEC-CCCceEEEeec--cCccEEEEEEecCCCCEEEEEeCCCcEEEEecCC---------CceeeeEecCCceEEEEE
Q 001366 854 KLWDA-CTGQTVSHYIE--HEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE---------KNSLATIKNIANVCCVQF 921 (1092)
Q Consensus 854 ~IWD~-~tg~~i~~l~~--h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~---------~~~l~~l~~~~~V~sl~f 921 (1092)
++||+ .+++. ..+.+ |...|++++|+| +..|++++.|+.|++||+++ ++++.++.+...|.+++|
T Consensus 82 ~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 158 (342)
T 1yfq_A 82 LKVDLIGSPSF-QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT 158 (342)
T ss_dssp EEECSSSSSSE-EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEE
T ss_pred EEEEeccCCce-EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEe
Confidence 99999 77755 67788 999999999999 78999999999999999998 888888888899999999
Q ss_pred ccCCCeEEEEEECCCeEEEEEcCC-CCc-ceEEecCCCCCeEEEEEcC--CCEEEEEECCCeEEEEEcCCCCCCCCCCCc
Q 001366 922 SAHSSHLLAFGSADYRTYCYDLRN-ARA-PWCVLAGHEKAVSYVKFLD--SGTLVTASTDNKLKLWDLKRTSHTGPSTNA 997 (1092)
Q Consensus 922 sp~~~~~latgs~Dg~I~vwDlr~-~~~-~~~~l~~H~~~V~~v~fs~--~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~ 997 (1092)
+|++ +++++.|+.|++||+++ ... .......|...|.+++|++ +.+|++++.||.|++||++.... .....
T Consensus 159 ~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~--~~~~~ 233 (342)
T 1yfq_A 159 NSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGD--DYNSS 233 (342)
T ss_dssp CSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCC--STTCT
T ss_pred cCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCc--ccccc
Confidence 9875 88999999999999998 544 2345567889999999985 67899999999999999984310 00125
Q ss_pred eeEEEcCCCC---------CeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCC-CCCEEE
Q 001366 998 CSLTFSGHTN---------EKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDN-GLFVSS 1067 (1092)
Q Consensus 998 ~~~~l~~h~~---------~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h-~~~V~s 1067 (1092)
....+..|.. .|++++|+|++++|++|+.||.|++||+.+++.+..+ .+| ...|.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~--------------~~~h~~~v~~ 299 (342)
T 1yfq_A 234 KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNF--------------AKFNEDSVVK 299 (342)
T ss_dssp TCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC--------------CCCSSSEEEE
T ss_pred cceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhh--------------hcccCCCceE
Confidence 5677777765 9999999999999999999999999999988876654 345 788999
Q ss_pred EEEeCCCCEEEEEecCCe
Q 001366 1068 VCWRRRSDMVVAANSSGC 1085 (1092)
Q Consensus 1068 va~spd~~~Lasgs~DG~ 1085 (1092)
++ |++.+|++|+.||.
T Consensus 300 ~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 300 IA--CSDNILCLATSDDT 315 (342)
T ss_dssp EE--ECSSEEEEEEECTH
T ss_pred ec--CCCCeEEEEecCCc
Confidence 99 99999999999998
No 81
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.2e-34 Score=329.02 Aligned_cols=280 Identities=21% Similarity=0.245 Sum_probs=200.3
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCC--
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD-- 288 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 288 (1092)
.|.+.+.+ +|.|.||++... ..+..++.|+..............++..++...+||||+.+++.........
T Consensus 7 ~y~~~~~lG~G~~g~V~~a~~~----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 7 DFEPIQCMGRGGFGVVFEAKNK----VDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HEEEEEEEECC-CSEEEEEEET----TTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred cCceeeEecCCCCeEEEEEEEc----CCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 44444444 478999999863 2255667776643333334455667778888999999999876643322100
Q ss_pred ------------------CCc--------cCCCCCcc---------c---c-CCCcccccCCCCCHHHHHhhcCCC--CC
Q 001366 289 ------------------LGA--------RTGVPASC---------W---I-GGLRQGSSDHGVNLREWLNARGHK--GK 327 (1092)
Q Consensus 289 ------------------~~~--------~~~~~~~~---------~---~-~~~~~~~~~~GgsL~~~l~~~~~~--~~ 327 (1092)
..+ ...+..+. . . -...+||||+|++|.++++..... .+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 000 00000000 0 0 023589999999999999875432 34
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccc
Q 001366 328 RIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTT 407 (1092)
Q Consensus 328 ~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 407 (1092)
...++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++............
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~------------------ 224 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL------------------ 224 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC-------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcccc------------------
Confidence 44689999999999999999999999999999999999999999999998755211100000
Q ss_pred cccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCccccccccccc
Q 001366 408 GIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQST 487 (1092)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (1092)
.......
T Consensus 225 -------------------------------------------------------------------------~~~~~~~ 231 (332)
T 3qd2_B 225 -------------------------------------------------------------------------TPMPAYA 231 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------------------------------------------ccccccc
Confidence 0000011
Q ss_pred ccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccc
Q 001366 488 SVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLH 567 (1092)
Q Consensus 488 ~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~ 567 (1092)
.....+||+.|+|||++.+..++.++|||||||+||||++++.+.......+........|..+...++.+.+|+.+||+
T Consensus 232 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 311 (332)
T 3qd2_B 232 THTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLS 311 (332)
T ss_dssp CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHC
T ss_pred cccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHcc
Confidence 12256899999999999999999999999999999999999988887777777777777776666677889999999999
Q ss_pred cCCCCCCCHHHHhhhhhhhh
Q 001366 568 PEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 568 ~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
+||.+|||+.|+|+||||.+
T Consensus 312 ~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 312 PSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp SSGGGSCCHHHHHHSTTCCC
T ss_pred CCCCcCCCHHHHhhchhhhc
Confidence 99999999999999999975
No 82
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.8e-31 Score=309.40 Aligned_cols=278 Identities=17% Similarity=0.275 Sum_probs=232.3
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECC
Q 001366 780 NVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDAC 859 (1092)
Q Consensus 780 ~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~ 859 (1092)
-.++.|+|+++ ++||+|. |++|+|||..+.. ........+|...|+||+|+|+ +++||+|+.||+|+|||+.
T Consensus 106 ~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~-----~~~~~~~~~~~~~V~sv~fspd-g~~lasgs~Dg~v~iWd~~ 177 (420)
T 4gga_A 106 YYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGD-----ILQLLQMEQPGEYISSVAWIKE-GNYLAVGTSSAEVQLWDVQ 177 (420)
T ss_dssp TTCBCEEECTT-SEEEEEE-TTEEEEEETTTCC-----EEEEEECCSTTCCEEEEEECTT-SSEEEEEETTSCEEEEETT
T ss_pred ccceeEEECCC-CEEEEEe-CCEEEEEECCCCC-----EEEEEEecCCCCcEEEEEECCC-CCEEEEEECCCeEEEEEcC
Confidence 34677999975 5788775 9999999987521 1111223357888999999998 8999999999999999999
Q ss_pred CCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCc-eeeeEe-cCCceEEEEEccCCCeEEEEEECCCe
Q 001366 860 TGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN-SLATIK-NIANVCCVQFSAHSSHLLAFGSADYR 937 (1092)
Q Consensus 860 tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~-~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~ 937 (1092)
+++.+..+.+|...+.++++++ .+|++|+.|+.+++||..... .+.++. |...++++.|+|++. ++++++.|+.
T Consensus 178 ~~~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~-~l~s~~~D~~ 253 (420)
T 4gga_A 178 QQKRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNL 253 (420)
T ss_dssp TTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSC
T ss_pred CCcEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCC-eeeeeecccc
Confidence 9999999999999999998864 799999999999999998754 445555 678899999999995 8999999999
Q ss_pred EEEEEcCCCCc---ceEEecCCCCCeEEEEEc--CCCEEEE--EECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeE
Q 001366 938 TYCYDLRNARA---PWCVLAGHEKAVSYVKFL--DSGTLVT--ASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKN 1010 (1092)
Q Consensus 938 I~vwDlr~~~~---~~~~l~~H~~~V~~v~fs--~~~~L~S--gs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~ 1010 (1092)
|++||..+++. .+.....|...|.+++|+ ....+++ |+.|++|++||+. ++.+...+..| ..+.
T Consensus 254 v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~--------t~~~~~~~~~~-~~v~ 324 (420)
T 4gga_A 254 VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC--------SGACLSAVDAH-SQVC 324 (420)
T ss_dssp EEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT--------TTEEEEEEECS-SCEE
T ss_pred ceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC--------ccccceeeccc-ccee
Confidence 99999987653 456778899999999998 3445655 4579999999998 45667777655 5688
Q ss_pred EEEEecCCCEEEEEe--cCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEE
Q 001366 1011 FVGLSTADGYIACGS--ESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKV 1088 (1092)
Q Consensus 1011 ~v~~spdg~~lasgs--~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~v 1088 (1092)
++.|+|+++.+++++ .|+.|+|||..+++++..+ .+|...|++|+|+|++.+||||+.||+|+|
T Consensus 325 ~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l--------------~gH~~~V~~l~~spdg~~l~S~s~D~tvri 390 (420)
T 4gga_A 325 SILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL--------------KGHTSRVLSLTMSPDGATVASAAADETLRL 390 (420)
T ss_dssp EEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE--------------CCCSSCEEEEEECTTSSCEEEEETTTEEEE
T ss_pred eeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEE--------------cCCCCCEEEEEEcCCCCEEEEEecCCeEEE
Confidence 999999999888765 7899999999988887654 468899999999999999999999999999
Q ss_pred EEcC
Q 001366 1089 LQMV 1092 (1092)
Q Consensus 1089 W~lv 1092 (1092)
|++.
T Consensus 391 Wdv~ 394 (420)
T 4gga_A 391 WRCF 394 (420)
T ss_dssp ECCS
T ss_pred EECC
Confidence 9973
No 83
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-31 Score=345.15 Aligned_cols=198 Identities=9% Similarity=0.021 Sum_probs=160.2
Q ss_pred ccchhhhhhccccccCCCCc--EEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEE
Q 001366 728 DRENLFLAQQDQEIQNPTDR--LGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKI 805 (1092)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~--l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~I 805 (1092)
+|...+.++. ++|++. ++++.|+++++|+....+... ...|...|.+++|+| |++||+++.|++|+|
T Consensus 15 gh~~~V~~la----fspdg~~lAsgs~Dg~I~lw~~~~~~~~~------~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~l 83 (902)
T 2oaj_A 15 GMSSKPIAAA----FDFTQNLLAIATVTGEVHIYGQQQVEVVI------KLEDRSAIKEMRFVK-GIYLVVINAKDTVYV 83 (902)
T ss_dssp ECSSCEEEEE----EETTTTEEEEEETTSEEEEECSTTCEEEE------ECSSCCCEEEEEEET-TTEEEEEETTCEEEE
T ss_pred CCCCCcEEEE----ECCCCCEEEEEeCCCEEEEEeCCCcEEEE------EcCCCCCEEEEEEcC-CCEEEEEECcCeEEE
Confidence 4555555443 355554 367899999999977654422 124788999999999 889999999999999
Q ss_pred EEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceE-----------EEeeccCccE
Q 001366 806 FEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTV-----------SHYIEHEKRA 874 (1092)
Q Consensus 806 wd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i-----------~~l~~h~~~V 874 (1092)
||+.... ....+.|...|++++|+|+ +++|++|+.||+|++||+.+++.. ..+.+|...|
T Consensus 84 Wd~~~~~--------~~~~~~~~~~V~~v~~sp~-g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V 154 (902)
T 2oaj_A 84 LSLYSQK--------VLTTVFVPGKITSIDTDAS-LDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPI 154 (902)
T ss_dssp EETTTCS--------EEEEEECSSCEEEEECCTT-CSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCC
T ss_pred EECCCCc--------EEEEEcCCCCEEEEEECCC-CCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCe
Confidence 9987521 1222347789999999998 899999999999999999988753 2335789999
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecC-------------------CceEEEEEccCCCeEEEEEECC
Q 001366 875 WSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNI-------------------ANVCCVQFSAHSSHLLAFGSAD 935 (1092)
Q Consensus 875 ~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~-------------------~~V~sl~fsp~~~~~latgs~D 935 (1092)
++++|+|.++..+++|+.|++| +||+++++++..+... ..|++++|+|++. +|++|+.|
T Consensus 155 ~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~D 232 (902)
T 2oaj_A 155 VSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHED 232 (902)
T ss_dssp CEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETT
T ss_pred EEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC-EEEEEECC
Confidence 9999999556789999999999 9999999988877643 5699999999985 99999999
Q ss_pred CeEEEEEcCCCC
Q 001366 936 YRTYCYDLRNAR 947 (1092)
Q Consensus 936 g~I~vwDlr~~~ 947 (1092)
+.|++||+++++
T Consensus 233 g~i~lWd~~~g~ 244 (902)
T 2oaj_A 233 NSLVFWDANSGH 244 (902)
T ss_dssp CCEEEEETTTCC
T ss_pred CeEEEEECCCCc
Confidence 999999997654
No 84
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-31 Score=312.39 Aligned_cols=280 Identities=15% Similarity=0.222 Sum_probs=232.8
Q ss_pred CCCCC--EEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001366 777 NSANV--ICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1092)
Q Consensus 777 ~h~~~--V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~ 854 (1092)
+|... +.+++|++ ..+++++.|+.|+||++.... ........|...|.+++|+|+ +.+|++|+.||.|+
T Consensus 89 ~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~------~~~~~~~~~~~~v~~v~~s~~-~~~l~~~~~dg~i~ 159 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGS------VSALAETDESTYVASVKWSHD-GSFLSVGLGNGLVD 159 (401)
T ss_dssp TCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCC------EEEEEECCTTCCEEEEEECTT-SSEEEEEETTSCEE
T ss_pred CCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCc------EeEeeecCCCCCEEEEEECCC-CCEEEEECCCCeEE
Confidence 44443 45566665 558888899999999987521 112233347899999999997 89999999999999
Q ss_pred EEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecC-CCceeeeEe-cCCceEEEEEccCCCeEEEEE
Q 001366 855 LWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN-EKNSLATIK-NIANVCCVQFSAHSSHLLAFG 932 (1092)
Q Consensus 855 IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~-~~~~l~~l~-~~~~V~sl~fsp~~~~~latg 932 (1092)
+||+.+++.+..+.+|...|.+++|++ ..|++|+.|+.|++||++ .+..+..+. +...|++++|+|++. +|++|
T Consensus 160 iwd~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~ 235 (401)
T 4aez_A 160 IYDVESQTKLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGL-QLASG 235 (401)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEEE
T ss_pred EEECcCCeEEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCC-EEEEE
Confidence 999999999999999999999999954 799999999999999999 455566665 678999999999885 99999
Q ss_pred ECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC-C-CEEEEEE--CCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCC
Q 001366 933 SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD-S-GTLVTAS--TDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNE 1008 (1092)
Q Consensus 933 s~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~-~-~~L~Sgs--~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~ 1008 (1092)
+.|+.|++||+++.. +...+.+|...|.+++|++ + ..+++++ .|+.|++||+.+ +.++..+. |...
T Consensus 236 ~~d~~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~--------~~~~~~~~-~~~~ 305 (401)
T 4aez_A 236 GNDNVVQIWDARSSI-PKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT--------GARVNTVD-AGSQ 305 (401)
T ss_dssp ETTSCEEEEETTCSS-EEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT--------CCEEEEEE-CSSC
T ss_pred eCCCeEEEccCCCCC-ccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC--------CCEEEEEe-CCCc
Confidence 999999999999865 4667889999999999994 3 4566655 799999999983 45666665 5678
Q ss_pred eEEEEEecCCCEEEEE--ecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeE
Q 001366 1009 KNFVGLSTADGYIACG--SESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCI 1086 (1092)
Q Consensus 1009 V~~v~~spdg~~lasg--s~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V 1086 (1092)
|.+++|+|++.+|+++ +.||.|++|++..+....... ..+|...|.+++|+|++.+|++++.||.|
T Consensus 306 v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~------------~~~h~~~v~~~~~s~dg~~l~s~~~dg~i 373 (401)
T 4aez_A 306 VTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVD------------IPAHDTRVLYSALSPDGRILSTAASDENL 373 (401)
T ss_dssp EEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEE------------EECCSSCCCEEEECTTSSEEEEECTTSEE
T ss_pred EEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEE------------ecCCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 9999999999999984 489999999988765544432 24678899999999999999999999999
Q ss_pred EEEEc
Q 001366 1087 KVLQM 1091 (1092)
Q Consensus 1087 ~vW~l 1091 (1092)
++|++
T Consensus 374 ~iw~~ 378 (401)
T 4aez_A 374 KFWRV 378 (401)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99997
No 85
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.9e-34 Score=325.35 Aligned_cols=252 Identities=19% Similarity=0.193 Sum_probs=191.9
Q ss_pred hhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 212 ~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
..|.+.+.++ |.|+||++.. ...+..++.|+....... .......++..++...+|||++.+++....+...+
T Consensus 15 ~~y~~~~~lG~G~~g~V~~a~~----~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 15 GNYRLLKTIGKGNFAKVKLARH----ILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp TTEEEEEEEEECSSEEEEEEEE----TTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCEEEEEEEeeCCCEEEEEEEE----CCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 3456655554 7899999975 223566777765433322 23344557778888899999999877655433333
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
.+|||++|++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+|||++.++.+
T Consensus 91 ----------------lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~ 153 (328)
T 3fe3_A 91 ----------------LIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNI 153 (328)
T ss_dssp ----------------EEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCE
T ss_pred ----------------EEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCE
Confidence 3899999999999997765 47777999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++.....
T Consensus 154 kl~DFG~a~~~~~~------------------------------------------------------------------ 167 (328)
T 3fe3_A 154 KIADFGFSNEFTVG------------------------------------------------------------------ 167 (328)
T ss_dssp EECSTTCCGGGSSS------------------------------------------------------------------
T ss_pred EEeeccCceecCCC------------------------------------------------------------------
Confidence 99999988654310
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC-CccccchhhhHHHHHHcC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-t~~sDIwSLGvll~ell~ 527 (1092)
......+||++|+|||++.+..+ +.++|||||||+||||++
T Consensus 168 --------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~ 209 (328)
T 3fe3_A 168 --------------------------------------GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209 (328)
T ss_dssp --------------------------------------CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHh
Confidence 01125679999999999998776 489999999999999998
Q ss_pred C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 528 R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 528 ~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
+ |.+.................| ...++.+.+|+.+||.+||.+|||+.|+|+||||+...+
T Consensus 210 g~~pf~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~ 273 (328)
T 3fe3_A 210 GSLPFDGQNLKELRERVLRGKYRIP--FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE 273 (328)
T ss_dssp SSCSSCCSSHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTCT
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCCC--CCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCCc
Confidence 5 555443333333333322222 235789999999999999999999999999999986543
No 86
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.5e-31 Score=322.32 Aligned_cols=321 Identities=15% Similarity=0.243 Sum_probs=250.7
Q ss_pred hccchhhhhhccccccCCCC---cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCC---CEEEEEEcCC-CCEEEEEeC
Q 001366 727 RDRENLFLAQQDQEIQNPTD---RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSAN---VICSISFDRD-EDHFAAAGV 799 (1092)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~---~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~---~V~sl~fspd-g~~latgg~ 799 (1092)
.+|...+..+. ++|++ .++++.|+.+++|+....+.... +.+|.. .|++++|+|+ +++|++|+.
T Consensus 157 ~~~~~~v~~~~----~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 227 (615)
T 1pgu_A 157 SGHSQRINACH----LKQSRPMRSMTVGDDGSVVFYQGPPFKFSAS-----DRTHHKQGSFVRDVEFSPDSGEFVITVGS 227 (615)
T ss_dssp CSCSSCEEEEE----ECSSSSCEEEEEETTTEEEEEETTTBEEEEE-----ECSSSCTTCCEEEEEECSTTCCEEEEEET
T ss_pred ecCCccEEEEE----ECCCCCcEEEEEeCCCcEEEEeCCCcceeee-----ecccCCCCceEEEEEECCCCCCEEEEEeC
Confidence 34444444433 34543 45778999999999887765543 557888 9999999999 999999999
Q ss_pred CCcEEEEEcCCCCCCCcccccceee-e---cCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeecc----C
Q 001366 800 SKKIKIFEFNALFNDSVDVYYPAVE-M---SNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEH----E 871 (1092)
Q Consensus 800 D~~I~Iwd~~~~~~~~~~~~~~~~~-~---~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h----~ 871 (1092)
|+.|++||+.... ..... . .|...|.+++|+ + +.+|++++.||+|++||+.+++.+..+..+ .
T Consensus 228 dg~i~vwd~~~~~-------~~~~~~~~~~~~~~~v~~~~~~-~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~ 298 (615)
T 1pgu_A 228 DRKISCFDGKSGE-------FLKYIEDDQEPVQGGIFALSWL-D-SQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLG 298 (615)
T ss_dssp TCCEEEEETTTCC-------EEEECCBTTBCCCSCEEEEEES-S-SSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGG
T ss_pred CCeEEEEECCCCC-------EeEEecccccccCCceEEEEEc-C-CCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCccc
Confidence 9999999986521 11112 2 789999999999 6 899999999999999999999999988876 4
Q ss_pred ccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccC--------------------------
Q 001366 872 KRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAH-------------------------- 924 (1092)
Q Consensus 872 ~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~-------------------------- 924 (1092)
..+.++.|. ++..+++++.|+.|++||+.+++.+..+. +...|.+++| |+
T Consensus 299 ~~~~~~~~~--~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v 375 (615)
T 1pgu_A 299 NQQVGVVAT--GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLI 375 (615)
T ss_dssp GCEEEEEEE--ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCE
T ss_pred CceeEEEeC--CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCce
Confidence 678888885 67899999999999999998877665554 2333333333 21
Q ss_pred -------CC-----------------------------------------------------------------------
Q 001366 925 -------SS----------------------------------------------------------------------- 926 (1092)
Q Consensus 925 -------~~----------------------------------------------------------------------- 926 (1092)
+.
T Consensus 376 ~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (615)
T 1pgu_A 376 VSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS 455 (615)
T ss_dssp EEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC
T ss_pred EEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc
Confidence 21
Q ss_pred -eEEEEEEC-CCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEc
Q 001366 927 -HLLAFGSA-DYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFS 1003 (1092)
Q Consensus 927 -~~latgs~-Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~ 1003 (1092)
.++++++. |+.|++||+.+.......+.+|...|.+++|+ ++.+|++++.||.|++||+. .+.++..+.
T Consensus 456 ~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~--------~~~~~~~~~ 527 (615)
T 1pgu_A 456 QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQ--------SREVKTSRW 527 (615)
T ss_dssp SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT--------TTEEEECCS
T ss_pred CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCC--------CCcceeEee
Confidence 24444555 55555555554321114557799999999999 77899999999999999998 456677777
Q ss_pred C-CCCCeEEEEEec----------CCCEEEEEecCCcEEEEeCCCC-CceeeeeccccCCCCCccccCCCCCCEEEEEEe
Q 001366 1004 G-HTNEKNFVGLST----------ADGYIACGSESNEVYAYHRSLP-MPITSYKFGSIDPISGKETDDDNGLFVSSVCWR 1071 (1092)
Q Consensus 1004 ~-h~~~V~~v~~sp----------dg~~lasgs~Dg~I~Iwd~~~~-~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~s 1071 (1092)
+ |...|++++|+| ++.+||+|+.|+.|++|++..+ .++.. ..+|...|++++|+
T Consensus 528 ~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~--------------~~~h~~~v~~l~~s 593 (615)
T 1pgu_A 528 AFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA--------------LNAHKDGVNNLLWE 593 (615)
T ss_dssp CCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEE--------------TTSSTTCEEEEEEE
T ss_pred cCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechh--------------hhcCccceEEEEEc
Confidence 7 999999999999 9999999999999999999876 44433 25678899999999
Q ss_pred CCCCEEEEEecCCeEEEEEc
Q 001366 1072 RRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1072 pd~~~Lasgs~DG~V~vW~l 1091 (1092)
|++. |++++.||.|++|++
T Consensus 594 ~~~~-l~s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 594 TPST-LVSSGADACIKRWNV 612 (615)
T ss_dssp ETTE-EEEEETTSCEEEEEE
T ss_pred CCCC-eEEecCCceEEEEee
Confidence 9999 999999999999997
No 87
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9.3e-32 Score=313.97 Aligned_cols=277 Identities=12% Similarity=0.119 Sum_probs=227.4
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCC
Q 001366 781 VICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACT 860 (1092)
Q Consensus 781 ~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~t 860 (1092)
.+++++|+|++++|++|+.|+.|++||+..... ...... ...+....|+++ +++|++|+.||.|++||+.+
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~-------~~~~~~-~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~ 128 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDG-------SKMLKR-ADYTAVDTAKLQ-MRRFILGTTEGDIKVLDSNF 128 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEET-------TTTSCS-CCEEEEEEECSS-SCEEEEEETTSCEEEECTTS
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccce-------eeEEec-CCceEEEEEecC-CCEEEEEECCCCEEEEeCCC
Confidence 345789999999999999999999999875211 111112 233444457776 89999999999999999999
Q ss_pred CceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEE
Q 001366 861 GQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTY 939 (1092)
Q Consensus 861 g~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~ 939 (1092)
++....+.+|...|++++|+| ++.+|++|+.|++|++||+++++.+..+. |...|.+++|+|++. +|++|+.|+.|+
T Consensus 129 ~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~v~ 206 (420)
T 3vl1_A 129 NLQREIDQAHVSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGR-NVLSASLDGTIR 206 (420)
T ss_dssp CEEEEETTSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTT-EEEEEETTSCEE
T ss_pred cceeeecccccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCC-EEEEEcCCCcEE
Confidence 999888889999999999999 88999999999999999999999998887 678899999999985 899999999999
Q ss_pred EEEcCCCCcceEEecC---CCCCeEEEEE---------------------c-CCCEEEEEECCCeEEEEEcCCCCCCCCC
Q 001366 940 CYDLRNARAPWCVLAG---HEKAVSYVKF---------------------L-DSGTLVTASTDNKLKLWDLKRTSHTGPS 994 (1092)
Q Consensus 940 vwDlr~~~~~~~~l~~---H~~~V~~v~f---------------------s-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~ 994 (1092)
+||+++++. +..+.. |...|.+++| + ++.+|++|+.||.|++||+++
T Consensus 207 iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~------- 278 (420)
T 3vl1_A 207 LWECGTGTT-IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFS------- 278 (420)
T ss_dssp EEETTTTEE-EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTT-------
T ss_pred EeECCCCce-eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCC-------
Confidence 999998753 445543 4555666655 4 456899999999999999984
Q ss_pred CCceeEEE-cCCCCCeEEEEEecCCC-EEEEEecCCcEEEEeCCCCCc-eeeeeccccCCCCCccccCCCCCCEEEEEEe
Q 001366 995 TNACSLTF-SGHTNEKNFVGLSTADG-YIACGSESNEVYAYHRSLPMP-ITSYKFGSIDPISGKETDDDNGLFVSSVCWR 1071 (1092)
Q Consensus 995 ~~~~~~~l-~~h~~~V~~v~~spdg~-~lasgs~Dg~I~Iwd~~~~~~-i~~~~~~~~~~i~~~~~~~~h~~~V~sva~s 1071 (1092)
......+ .+|...|++++|+|++. +|++|+.||.|++||+..+.. +..+. ..|...|+++.|
T Consensus 279 -~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~-------------~~~~~~v~~~~~- 343 (420)
T 3vl1_A 279 -KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFL-------------INEGTPINNVYF- 343 (420)
T ss_dssp -CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-------------ESTTSCEEEEEE-
T ss_pred -CceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhh-------------ccCCCCceEEEe-
Confidence 3344444 45889999999999998 999999999999999987653 44433 235678888865
Q ss_pred CCCCEEEEEecCCeEEEEEc
Q 001366 1072 RRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1072 pd~~~Lasgs~DG~V~vW~l 1091 (1092)
+++.+|++++.||.|++|++
T Consensus 344 ~~~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 344 AAGALFVSSGFDTSIKLDII 363 (420)
T ss_dssp ETTEEEEEETTTEEEEEEEE
T ss_pred CCCCEEEEecCCccEEEEec
Confidence 57889999999999999996
No 88
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.5e-34 Score=328.03 Aligned_cols=250 Identities=18% Similarity=0.208 Sum_probs=182.7
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|+||++... ..++.++.|+........+.....++...+...+||||+.++.........+
T Consensus 12 y~i~~~lG~G~~g~V~~a~~~----~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~--- 84 (347)
T 3zgw_A 12 YELHETIGTGGFAKVKLACHI----LTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIF--- 84 (347)
T ss_dssp EEEEEEEEECSSCEEEEEEET----TTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE---
T ss_pred eEEEEEEEcCCCeEEEEEEEC----CCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE---
Confidence 4444444 478999999752 2356677776644333333444556777888889999998877654333222
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
.+||||+|++|.+++...+ .+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus 85 -------------lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~ 150 (347)
T 3zgw_A 85 -------------MVLEYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLI 150 (347)
T ss_dssp -------------EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred -------------EEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEE
Confidence 3899999999999997765 47788999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||++.......
T Consensus 151 DFG~a~~~~~~~-------------------------------------------------------------------- 162 (347)
T 3zgw_A 151 DFGLCAKPKGNK-------------------------------------------------------------------- 162 (347)
T ss_dssp CCTTCBC-------------------------------------------------------------------------
T ss_pred eccCcccccCCC--------------------------------------------------------------------
Confidence 999886533100
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC-CccccchhhhHHHHHHcCC--
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIYSLGVLFFELFGR-- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-t~~sDIwSLGvll~ell~~-- 528 (1092)
.......+||++|+|||++.+..+ +.++|||||||+||||+++
T Consensus 163 ----------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~ 208 (347)
T 3zgw_A 163 ----------------------------------DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFL 208 (347)
T ss_dssp -------------------------------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSC
T ss_pred ----------------------------------CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCC
Confidence 001125679999999999998775 8999999999999999986
Q ss_pred -CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 529 -FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 529 -f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|...................| ...++.+.+|+.+||.+||.+|||+.|+|+||||...
T Consensus 209 Pf~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~~ 267 (347)
T 3zgw_A 209 PFDDDNVMALYKKIMRGKYDVP--KWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQD 267 (347)
T ss_dssp SSCCSSHHHHHHHHHHTCCCCC--TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHTT
T ss_pred CCCCCCHHHHHHHHHcCCCCCC--CCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhcC
Confidence 555444333333333322222 2357889999999999999999999999999999864
No 89
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2e-31 Score=303.19 Aligned_cols=287 Identities=14% Similarity=0.274 Sum_probs=237.7
Q ss_pred eecCCCCCEEEEEEcCC---CCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECC
Q 001366 774 EFNNSANVICSISFDRD---EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYD 850 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspd---g~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~D 850 (1092)
.+.+|...|++++|+|+ |++||+|+.|+.|+|||+.... ........+|...|.+++|+|+ +.+|++++.|
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d 107 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG-----QTIPKAQQMHTGPVLDVCWSDD-GSKVFTASCD 107 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS-----CEEEEEEEECSSCEEEEEECTT-SSEEEEEETT
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC-----ceeEEEeccccCCEEEEEECcC-CCEEEEEcCC
Confidence 46789999999999999 6999999999999999987411 1122345679999999999997 8999999999
Q ss_pred CcEEEEECCCCceEEEeeccCccEEEEEE--ecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeE
Q 001366 851 GVVKLWDACTGQTVSHYIEHEKRAWSVDF--SQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHL 928 (1092)
Q Consensus 851 gtV~IWD~~tg~~i~~l~~h~~~V~sv~f--sp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~ 928 (1092)
|+|++||+.+++.+. +..|...|++++| +| ++.+|++|+.|+.|++||+++++++..+.....+.++.+.++ .
T Consensus 108 g~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~---~ 182 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYP---M 182 (368)
T ss_dssp SEEEEEETTTTEEEE-EEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETT---E
T ss_pred CcEEEEEcCCCCcee-eccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCC---e
Confidence 999999999988776 5579999999999 77 778899999999999999999999999998888888888753 6
Q ss_pred EEEEECCCeEEEEEcCCCCcceEEe-cCCCCCeEEEEEc-CCC----EEEEEECCCeEEEEEcCCCCCCCCCCCceeEEE
Q 001366 929 LAFGSADYRTYCYDLRNARAPWCVL-AGHEKAVSYVKFL-DSG----TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTF 1002 (1092)
Q Consensus 929 latgs~Dg~I~vwDlr~~~~~~~~l-~~H~~~V~~v~fs-~~~----~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l 1002 (1092)
+++++.++.+++||++......... ..+...+.++.+. ... .+++++.||.|++||++... .......+
T Consensus 183 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~-----~~~~~~~~ 257 (368)
T 3mmy_A 183 AVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPN-----PAKDNFTF 257 (368)
T ss_dssp EEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSC-----HHHHSEEE
T ss_pred eEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCC-----ccccceee
Confidence 8889999999999999765443333 2344556666664 232 39999999999999998432 11456677
Q ss_pred cCCCC------------CeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEE
Q 001366 1003 SGHTN------------EKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCW 1070 (1092)
Q Consensus 1003 ~~h~~------------~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~ 1070 (1092)
.+|.. .|++++|+|++.+|++|+.||.|++||+..++.+..+ ..|...|++++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~--------------~~~~~~v~~~~~ 323 (368)
T 3mmy_A 258 KCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTS--------------EQLDQPISACCF 323 (368)
T ss_dssp ECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC--------------CCCSSCEEEEEE
T ss_pred eeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEe--------------cCCCCCceEEEE
Confidence 77776 7999999999999999999999999999988776644 357789999999
Q ss_pred eCCCCEEEEEecCCeEEEEE
Q 001366 1071 RRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1071 spd~~~Lasgs~DG~V~vW~ 1090 (1092)
+|++.+|++|+.|+..+.|+
T Consensus 324 s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 324 NHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp CTTSSCEEEEECCCSTTCGG
T ss_pred CCCCCeEEEEeccccccccc
Confidence 99999999999998665554
No 90
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.3e-30 Score=291.40 Aligned_cols=276 Identities=17% Similarity=0.264 Sum_probs=226.5
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCC
Q 001366 782 ICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG 861 (1092)
Q Consensus 782 V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg 861 (1092)
+++|+|++++ +||+| .|++|+|||+.+.. ........+|...|++++|+|+ +++|++|+.||+|+|||+.++
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~-----~~~~~~~~~~~~~V~~v~~~~~-~~~l~sgs~Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGD-----ILQLLQMEQPGEYISSVAWIKE-GNYLAVGTSSAEVQLWDVQQQ 99 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCC-----EEEEEECCSTTCCEEEEEECTT-SSEEEEEETTSEEEEEETTTT
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCC-----EEEEEEecCCCCeEEEEEECCC-CCEEEEEECCCcEEEeecCCc
Confidence 5679999886 77776 59999999987521 1111223367888999999998 899999999999999999999
Q ss_pred ceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCce-eeeEe-cCCceEEEEEccCCCeEEEEEECCCeEE
Q 001366 862 QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNS-LATIK-NIANVCCVQFSAHSSHLLAFGSADYRTY 939 (1092)
Q Consensus 862 ~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~-l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~ 939 (1092)
+++..+.+|...+.++.+. +..+++|+.++.+++|+...... +..+. +...+.++.|++++. ++++++.|+.|+
T Consensus 100 ~~~~~~~~h~~~~~~~~~~---~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~ 175 (318)
T 4ggc_A 100 KRLRNMTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVN 175 (318)
T ss_dssp EEEEEEECCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEE
T ss_pred eeEEEecCccceEEEeecC---CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCC-EEEEEecCccee
Confidence 9999999999998877765 47999999999999999987644 34444 678899999999995 899999999999
Q ss_pred EEEcCCCCc---ceEEecCCCCCeEEEEEcC--CCE--EEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEE
Q 001366 940 CYDLRNARA---PWCVLAGHEKAVSYVKFLD--SGT--LVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFV 1012 (1092)
Q Consensus 940 vwDlr~~~~---~~~~l~~H~~~V~~v~fs~--~~~--L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v 1012 (1092)
+||+++++. .......|...|.++.+++ ... +++++.+++|++||... ... .....+...+..+
T Consensus 176 iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~--------~~~-~~~~~~~~~v~~~ 246 (318)
T 4ggc_A 176 VWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS--------GAC-LSAVDAHSQVCSI 246 (318)
T ss_dssp EEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTT--------CCE-EEEEECSSCEEEE
T ss_pred EEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccc--------ccc-cccccceeeeeee
Confidence 999987653 3455677889999999983 233 34667899999999983 223 3334577789999
Q ss_pred EEecCCCEEEEEe--cCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1013 GLSTADGYIACGS--ESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1013 ~~spdg~~lasgs--~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
.|+|++..+++++ .|+.|+|||+.+++++..+ .+|...|++|+|+|++.+||||+.||+|+||+
T Consensus 247 ~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l--------------~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd 312 (318)
T 4ggc_A 247 LWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL--------------KGHTSRVLSLTMSPDGATVASAAADETLRLWR 312 (318)
T ss_dssp EEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE--------------CCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred eecccccceEEEEEcCCCEEEEEECCCCcEEEEE--------------cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 9999999877655 7999999999998887755 46889999999999999999999999999999
Q ss_pred cC
Q 001366 1091 MV 1092 (1092)
Q Consensus 1091 lv 1092 (1092)
+.
T Consensus 313 ~~ 314 (318)
T 4ggc_A 313 CF 314 (318)
T ss_dssp CS
T ss_pred CC
Confidence 73
No 91
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=8.1e-31 Score=320.88 Aligned_cols=340 Identities=14% Similarity=0.129 Sum_probs=258.0
Q ss_pred chhhhccchh-hhhhccccccCC--CC--cEEeEcCCeEEEEEcccce---EEeeEEeeeecCCCCCEEEEEEcCCCCEE
Q 001366 723 NDLLRDRENL-FLAQQDQEIQNP--TD--RLGAFFDGLCKYARYSKFE---VQGMLRTGEFNNSANVICSISFDRDEDHF 794 (1092)
Q Consensus 723 ~~~l~~~~~~-~~~~~~~~~~~~--~~--~l~~~~D~~~k~w~~~~~~---~~~~l~~~~l~~h~~~V~sl~fspdg~~l 794 (1092)
...+.+|... +..+. ++| ++ .+++..|+.+++|++.... .........+..|...|.+++|+|++++|
T Consensus 56 ~~~~~~h~~~~v~~~~----~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 131 (615)
T 1pgu_A 56 VVQFTGHGSSVVTTVK----FSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRL 131 (615)
T ss_dssp EEEECTTTTSCEEEEE----ECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred ceEEecCCCceEEEEE----ECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEE
Confidence 3445666666 65544 345 44 3467789999999985320 00011122466899999999999999999
Q ss_pred EEEeCC----CcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeecc
Q 001366 795 AAAGVS----KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEH 870 (1092)
Q Consensus 795 atgg~D----~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h 870 (1092)
++++.+ +.|.+||... ......+|...|.+++|+|++..+|++++.|++|++||+.+++.+..+.+|
T Consensus 132 ~~~~~~~~~~~~v~~~d~~~---------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~ 202 (615)
T 1pgu_A 132 CVVGEGRDNFGVFISWDSGN---------SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTH 202 (615)
T ss_dssp EEEECCSSCSEEEEETTTCC---------EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSS
T ss_pred EEeccCCCCccEEEEEECCC---------cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeeccc
Confidence 999988 6888887322 223345789999999999984448999999999999999999999999999
Q ss_pred Cc---cEEEEEEecCC-CCEEEEEeCCCcEEEEecCCCceeeeE-----ecCCceEEEEEccCCCeEEEEEECCCeEEEE
Q 001366 871 EK---RAWSVDFSQVH-PTKLASGSDDCSVKLWNINEKNSLATI-----KNIANVCCVQFSAHSSHLLAFGSADYRTYCY 941 (1092)
Q Consensus 871 ~~---~V~sv~fsp~~-~~~laSgs~Dg~I~iWDl~~~~~l~~l-----~~~~~V~sl~fsp~~~~~latgs~Dg~I~vw 941 (1092)
.. .|++++|+| + +.+|++++.|+.|++||+++++.+..+ .+...|.+++|+ ++ .+|++++.|+.|++|
T Consensus 203 ~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~~~~~d~~i~~w 279 (615)
T 1pgu_A 203 HKQGSFVRDVEFSP-DSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DS-QKFATVGADATIRVW 279 (615)
T ss_dssp SCTTCCEEEEEECS-TTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SS-SEEEEEETTSEEEEE
T ss_pred CCCCceEEEEEECC-CCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CC-CEEEEEcCCCcEEEE
Confidence 99 999999999 6 899999999999999999999999998 677899999999 76 489999999999999
Q ss_pred EcCCCCcc--------------------------------------------eEEecCCCC-------------------
Q 001366 942 DLRNARAP--------------------------------------------WCVLAGHEK------------------- 958 (1092)
Q Consensus 942 Dlr~~~~~--------------------------------------------~~~l~~H~~------------------- 958 (1092)
|+++.+.. +..+.+|..
T Consensus 280 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i 359 (615)
T 1pgu_A 280 DVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRI 359 (615)
T ss_dssp ETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCE
T ss_pred ECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeE
Confidence 99865321 112233333
Q ss_pred --------------CeEEEEEcCCCEEEEEECCCeEEEEEcCCCCC----------------------------------
Q 001366 959 --------------AVSYVKFLDSGTLVTASTDNKLKLWDLKRTSH---------------------------------- 990 (1092)
Q Consensus 959 --------------~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~---------------------------------- 990 (1092)
.|.+++|.++..|++++.|+.|++||+.+...
T Consensus 360 ~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 439 (615)
T 1pgu_A 360 MEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDI 439 (615)
T ss_dssp EETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCce
Confidence 34444444355566666666666666542110
Q ss_pred --------------------------CCC------CCCcee-EEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCC
Q 001366 991 --------------------------TGP------STNACS-LTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSL 1037 (1092)
Q Consensus 991 --------------------------~~~------~~~~~~-~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~ 1037 (1092)
.+. ...... ..+.+|...|++++|+|++++|++|+.|+.|++|++..
T Consensus 440 ~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 519 (615)
T 1pgu_A 440 IKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQS 519 (615)
T ss_dssp EEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred eeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCC
Confidence 000 000011 44567899999999999999999999999999999998
Q ss_pred CCceeeeeccccCCCCCccccCCCCCCEEEEEEeC----------CCCEEEEEecCCeEEEEEc
Q 001366 1038 PMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRR----------RSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1038 ~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~sp----------d~~~Lasgs~DG~V~vW~l 1091 (1092)
++.+..+. ..|...|++++|+| ++.+|++|+.||.|+||++
T Consensus 520 ~~~~~~~~-------------~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~ 570 (615)
T 1pgu_A 520 REVKTSRW-------------AFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSV 570 (615)
T ss_dssp TEEEECCS-------------CCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEES
T ss_pred CcceeEee-------------cCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEEC
Confidence 87765432 12788999999999 9999999999999999986
No 92
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.1e-31 Score=335.84 Aligned_cols=287 Identities=21% Similarity=0.322 Sum_probs=247.6
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
.+.+|...|++++|+|++.+||+|+.|+.|+|||+.+. .......+|...|.+++|+|+ +.+|++++.||+|
T Consensus 8 ~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i 79 (814)
T 3mkq_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ-------VEVRSIQVTETPVRAGKFIAR-KNWIIVGSDDFRI 79 (814)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-------EEEEEEECCSSCEEEEEEEGG-GTEEEEEETTSEE
T ss_pred eeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC-------ceEEEEecCCCcEEEEEEeCC-CCEEEEEeCCCeE
Confidence 45689999999999999999999999999999998651 222344578999999999998 8999999999999
Q ss_pred EEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCC-ceeeeEe-cCCceEEEEEccCCCeEEEE
Q 001366 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEK-NSLATIK-NIANVCCVQFSAHSSHLLAF 931 (1092)
Q Consensus 854 ~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~-~~l~~l~-~~~~V~sl~fsp~~~~~lat 931 (1092)
++||+.+++.+..+.+|...|++++|+| ++..|++|+.||+|++||+.++ .....+. +...|.+++|+|++..+|++
T Consensus 80 ~vw~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~ 158 (814)
T 3mkq_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (814)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEE
T ss_pred EEEECCCCcEEEEEecCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEE
Confidence 9999999999999999999999999999 8899999999999999999987 5555665 67889999999943369999
Q ss_pred EECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc---CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCC
Q 001366 932 GSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL---DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNE 1008 (1092)
Q Consensus 932 gs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs---~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~ 1008 (1092)
++.||.|++||+++..........|...|.+++|+ ++.+|++++.||.|++||+. .+.++..+.+|...
T Consensus 159 ~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~--------~~~~~~~~~~~~~~ 230 (814)
T 3mkq_A 159 GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ--------TKSCVATLEGHMSN 230 (814)
T ss_dssp EETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETT--------TTEEEEEEECCSSC
T ss_pred EeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC--------CCcEEEEEcCCCCC
Confidence 99999999999988766555555566899999998 46689999999999999998 45678889999999
Q ss_pred eEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCE-EEEEecCCeEE
Q 001366 1009 KNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDM-VVAANSSGCIK 1087 (1092)
Q Consensus 1009 V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~-Lasgs~DG~V~ 1087 (1092)
|.+++|+|++.+|++|+.||.|++||..+++.+..+. .|...|++++|+|++.. +++++.|+.+.
T Consensus 231 v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 296 (814)
T 3mkq_A 231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN--------------VGLERSWCIATHPTGRKNYIASGFDNGFT 296 (814)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEEC--------------CSSSSEEEEEECTTCGGGEEEEEETTEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee--------------cCCCcEEEEEEccCCCceEEEEEeCCCEE
Confidence 9999999999999999999999999999888776553 34568999999999873 24555577788
Q ss_pred EEEc
Q 001366 1088 VLQM 1091 (1092)
Q Consensus 1088 vW~l 1091 (1092)
+|++
T Consensus 297 ~~~~ 300 (814)
T 3mkq_A 297 VLSL 300 (814)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8874
No 93
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.5e-31 Score=352.88 Aligned_cols=340 Identities=15% Similarity=0.221 Sum_probs=277.4
Q ss_pred hhhccchhhhhhccccccCCCCc--EEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCc
Q 001366 725 LLRDRENLFLAQQDQEIQNPTDR--LGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKK 802 (1092)
Q Consensus 725 ~l~~~~~~~~~~~~~~~~~~~~~--l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~ 802 (1092)
.+.+|.+.+..+. ++|++. ++++.|+++++|+....+... .+.+|...|.+++|+|+|++||+|+.|++
T Consensus 610 ~~~~h~~~v~~~~----~s~~~~~l~s~~~d~~i~vw~~~~~~~~~-----~~~~h~~~v~~~~~s~~~~~l~s~~~d~~ 680 (1249)
T 3sfz_A 610 VVRPHTDAVYHAC----FSQDGQRIASCGADKTLQVFKAETGEKLL-----DIKAHEDEVLCCAFSSDDSYIATCSADKK 680 (1249)
T ss_dssp EECCCSSCEEEEE----ECTTSSEEEEEETTSCEEEEETTTCCEEE-----EECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEecccccEEEEE----ECCCCCEEEEEeCCCeEEEEECCCCCEEE-----EeccCCCCEEEEEEecCCCEEEEEeCCCe
Confidence 4556666665544 355554 466799999999998766544 35589999999999999999999999999
Q ss_pred EEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecC-CCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEec
Q 001366 803 IKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNY-IKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQ 881 (1092)
Q Consensus 803 I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~-~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp 881 (1092)
|+|||+.+. .......+|...|.+++|+|+ ...++++|+.||+|++||+.+++++..+.+|...|++++|+|
T Consensus 681 v~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp 753 (1249)
T 3sfz_A 681 VKIWDSATG-------KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSP 753 (1249)
T ss_dssp EEEEETTTC-------CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECS
T ss_pred EEEEECCCC-------ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEec
Confidence 999998752 223345579999999999995 266899999999999999999999999999999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCceeeeEec--------------CCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCC
Q 001366 882 VHPTKLASGSDDCSVKLWNINEKNSLATIKN--------------IANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNAR 947 (1092)
Q Consensus 882 ~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~--------------~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~ 947 (1092)
++..|++|+.||+|++||++++.....+.. ...+.+++|+|++. .+++++ ++.+.+||+.++.
T Consensus 754 -~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~-~l~~~~-~~~v~~~d~~~~~ 830 (1249)
T 3sfz_A 754 -DDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGD-KIIVAA-KNKVLLFDIHTSG 830 (1249)
T ss_dssp -STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSS-EEEEEE-TTEEEEEETTTCC
T ss_pred -CCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCC-EEEEEc-CCcEEEEEecCCC
Confidence 889999999999999999999887776652 22688999999996 666665 7899999999887
Q ss_pred cceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEec
Q 001366 948 APWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSE 1026 (1092)
Q Consensus 948 ~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~ 1026 (1092)
.......+|...|.+++|+ ++..+++++.|+.|++||+. .+.++..+.+|...|++++|+|+|.+|++++.
T Consensus 831 ~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~--------~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~ 902 (1249)
T 3sfz_A 831 LLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNID--------SRLKVADCRGHLSWVHGVMFSPDGSSFLTASD 902 (1249)
T ss_dssp EEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETT--------TTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcC--------CCceeeecCCCccceEEEEECCCCCEEEEEeC
Confidence 6555666999999999999 67789999999999999998 45678889999999999999999999999999
Q ss_pred CCcEEEEeCCCCC-----------------------------------------------ceeeeecc---------cc-
Q 001366 1027 SNEVYAYHRSLPM-----------------------------------------------PITSYKFG---------SI- 1049 (1092)
Q Consensus 1027 Dg~I~Iwd~~~~~-----------------------------------------------~i~~~~~~---------~~- 1049 (1092)
|+.|++|+..... .+....+. ..
T Consensus 903 dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~ 982 (1249)
T 3sfz_A 903 DQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDED 982 (1249)
T ss_dssp TSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETT
T ss_pred CCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCC
Confidence 9999999954210 01111110 00
Q ss_pred ------CCCCCc--cccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1050 ------DPISGK--ETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1050 ------~~i~~~--~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
+...+. ....+|...|++++|+|++++|++++.||.|++|++
T Consensus 983 g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~ 1032 (1249)
T 3sfz_A 983 GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNW 1032 (1249)
T ss_dssp SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEET
T ss_pred CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 001111 234578899999999999999999999999999986
No 94
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-34 Score=323.45 Aligned_cols=251 Identities=17% Similarity=0.166 Sum_probs=190.7
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+.+.+ ++.|+||++... ..+..++.|+... ...+.....++..++...+|||++.+++........+
T Consensus 6 ~y~~~~~lG~G~~g~Vy~~~~~----~~~~~~a~K~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~-- 77 (321)
T 1tki_A 6 KYMIAEDLGRGEFGIVHRCVET----SSKKTYMAKFVKV--KGTDQVLVKKEISILNIARHRNILHLHESFESMEELV-- 77 (321)
T ss_dssp TEEEEEEEEECSSEEEEEEEET----TTTEEEEEEEECC--CTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEE--
T ss_pred ceEeeeEEecCCCeEEEEEEEC----CCCcEEEEEEEec--CcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEE--
Confidence 34444444 478999999752 2244555555432 1223344556777788889999999877665443333
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc--CCcE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ--SNQV 368 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~--~~~v 368 (1092)
.+||||+|++|.+++...+..+++.+++.++.||+.||.|||++||+||||||+|||++. ++.+
T Consensus 78 --------------lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~ 143 (321)
T 1tki_A 78 --------------MIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTI 143 (321)
T ss_dssp --------------EEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCE
T ss_pred --------------EEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCE
Confidence 389999999999999877667888899999999999999999999999999999999987 7899
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
|++|||+++.+...
T Consensus 144 kl~Dfg~a~~~~~~------------------------------------------------------------------ 157 (321)
T 1tki_A 144 KIIEFGQARQLKPG------------------------------------------------------------------ 157 (321)
T ss_dssp EECCCTTCEECCTT------------------------------------------------------------------
T ss_pred EEEECCCCeECCCC------------------------------------------------------------------
Confidence 99999998764310
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~ 528 (1092)
.......||+.|+|||++.+..++.++|||||||+||||+++
T Consensus 158 --------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g 199 (321)
T 1tki_A 158 --------------------------------------DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199 (321)
T ss_dssp --------------------------------------CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHS
T ss_pred --------------------------------------CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhC
Confidence 011245789999999999998899999999999999999986
Q ss_pred ---CCcHHHHHHHHHhccccCCC--CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 529 ---FDSERALAAAMSDLRDRILP--PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
|..................+ +.+...++.+.+|+.+||++||.+|||+.|+|+||||.+..
T Consensus 200 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 265 (321)
T 1tki_A 200 INPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp SCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred CCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence 54443333333333222221 23456788999999999999999999999999999998653
No 95
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.4e-33 Score=316.80 Aligned_cols=250 Identities=14% Similarity=0.117 Sum_probs=188.7
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||++... ..+..++.|++..... .......++..++...+||||+.+++........+
T Consensus 22 y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~--- 93 (297)
T 3fxz_A 22 YTRFEKIGQGASGTVYTAMDV----ATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVGDELW--- 93 (297)
T ss_dssp BCCCEEEEEETTEEEEEEEBT----TTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE---
T ss_pred eeeeeeeccCCCeEEEEEEEC----CCCcEEEEEEeecccc-cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEE---
Confidence 5444444 478999999642 1245566665533222 22334456667788899999999887655443333
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
.+||||+|++|.+++... .++..+++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus 94 -------------lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~ 158 (297)
T 3fxz_A 94 -------------VVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 158 (297)
T ss_dssp -------------EEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEEC
T ss_pred -------------EEEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEe
Confidence 389999999999999775 47888999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++......
T Consensus 159 Dfg~~~~~~~~~-------------------------------------------------------------------- 170 (297)
T 3fxz_A 159 DFGFCAQITPEQ-------------------------------------------------------------------- 170 (297)
T ss_dssp CCTTCEECCSTT--------------------------------------------------------------------
T ss_pred eCCCceecCCcc--------------------------------------------------------------------
Confidence 999887643100
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR--- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~--- 528 (1092)
......+||+.|+|||++.+..++.++|||||||+||||+++
T Consensus 171 -----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p 215 (297)
T 3fxz_A 171 -----------------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215 (297)
T ss_dssp -----------------------------------CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred -----------------------------------cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 001145789999999999999999999999999999999986
Q ss_pred CCcHHHHHHHHHhccccC-CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 529 FDSERALAAAMSDLRDRI-LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 529 f~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
|................. ..+.....++.+.+|+.+||++||.+|||+.|+|+||||....
T Consensus 216 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 277 (297)
T 3fxz_A 216 YLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAK 277 (297)
T ss_dssp TTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred CCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccC
Confidence 444333333333222222 1222334578889999999999999999999999999998654
No 96
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.6e-31 Score=304.12 Aligned_cols=296 Identities=18% Similarity=0.229 Sum_probs=240.6
Q ss_pred hhccchhhhhhccccccCCCC--cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCC----CCEEEEEeC
Q 001366 726 LRDRENLFLAQQDQEIQNPTD--RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRD----EDHFAAAGV 799 (1092)
Q Consensus 726 l~~~~~~~~~~~~~~~~~~~~--~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspd----g~~latgg~ 799 (1092)
..+|...+.++.+........ .+.+..++.+++|+....+....+.......|...|++++|+|+ +.+|++|+.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 345666666554421100112 45666788999999987766666665445568899999999999 679999999
Q ss_pred CCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEe---eccCccEEE
Q 001366 800 SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHY---IEHEKRAWS 876 (1092)
Q Consensus 800 D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l---~~h~~~V~s 876 (1092)
|+.|+|||+... .......+|...|.+++|+|+++.+|++++.||+|++||+.+++.+..+ .+|...|.+
T Consensus 94 dg~i~v~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 94 RGIIRIINPITM-------QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLS 166 (366)
T ss_dssp TCEEEEECTTTC-------CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEE
T ss_pred CCEEEEEEchhc-------eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeE
Confidence 999999998752 2223445799999999999944899999999999999999999998888 689999999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-----------------------------cCCceEEEEEccCCCe
Q 001366 877 VDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-----------------------------NIANVCCVQFSAHSSH 927 (1092)
Q Consensus 877 v~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-----------------------------~~~~V~sl~fsp~~~~ 927 (1092)
++|+| ++..|++++.|+.|++||+++++.+..+. +...|.+++|+ + .
T Consensus 167 ~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~ 242 (366)
T 3k26_A 167 ADYDL-LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G-D 242 (366)
T ss_dssp EEECT-TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T-T
T ss_pred EEECC-CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C-C
Confidence 99999 88999999999999999999876654433 67789999999 4 4
Q ss_pred EEEEEECCCeEEEEEcCCCCc-------------ceEEecCCCCCeEEEEEc-C--CCEEEEEECCCeEEEEEcCCCCCC
Q 001366 928 LLAFGSADYRTYCYDLRNARA-------------PWCVLAGHEKAVSYVKFL-D--SGTLVTASTDNKLKLWDLKRTSHT 991 (1092)
Q Consensus 928 ~latgs~Dg~I~vwDlr~~~~-------------~~~~l~~H~~~V~~v~fs-~--~~~L~Sgs~Dg~I~vWDl~~~~~~ 991 (1092)
++++++.|+.|++||+++... .+..+.+|...|.+++|+ + +.+|++|+.||.|++||+.....
T Consensus 243 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~- 321 (366)
T 3k26_A 243 LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDP- 321 (366)
T ss_dssp EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSG-
T ss_pred EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCC-
Confidence 899999999999999987643 256678899999999998 5 78999999999999999985432
Q ss_pred CCCCCceeEEEcCC--CCCeEEEEEecCCCEEEEEecCCcEEEEeCC
Q 001366 992 GPSTNACSLTFSGH--TNEKNFVGLSTADGYIACGSESNEVYAYHRS 1036 (1092)
Q Consensus 992 ~~~~~~~~~~l~~h--~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~ 1036 (1092)
.......+.+| ...|++++|+|++.+|++|+.||.|++||+.
T Consensus 322 ---~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 322 ---HKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp ---GGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ---ccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 12244577777 7899999999999999999999999999974
No 97
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.2e-32 Score=309.24 Aligned_cols=252 Identities=18% Similarity=0.220 Sum_probs=204.7
Q ss_pred eecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCc--eEEEeeccCccEEEEEEecC-CCCEEEEEeCCCcEEEEe
Q 001366 824 EMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ--TVSHYIEHEKRAWSVDFSQV-HPTKLASGSDDCSVKLWN 900 (1092)
Q Consensus 824 ~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~--~i~~l~~h~~~V~sv~fsp~-~~~~laSgs~Dg~I~iWD 900 (1092)
..+|...|++++|+|+ +++||+|+.|++|+|||+.++. .+..+.+|...|++++|++. ++.+|+||+.|++|++||
T Consensus 9 ~~~H~~~V~~v~~s~~-g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYY-GTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp -----CCEEEEEECGG-GCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred cccccCeEEEeeEcCC-CCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 4578999999999998 8999999999999999998875 56788999999999999852 478999999999999999
Q ss_pred cCCCc--eeeeEe-cCCceEEEEEccCC-CeEEEEEECCCeEEEEEcCCCCc--ceEEecCCCCCeEEEEEcCC------
Q 001366 901 INEKN--SLATIK-NIANVCCVQFSAHS-SHLLAFGSADYRTYCYDLRNARA--PWCVLAGHEKAVSYVKFLDS------ 968 (1092)
Q Consensus 901 l~~~~--~l~~l~-~~~~V~sl~fsp~~-~~~latgs~Dg~I~vwDlr~~~~--~~~~l~~H~~~V~~v~fs~~------ 968 (1092)
++++. .+..+. |...|.+++|+|++ ..+|++|+.|+.|++||++.... ....+.+|...|.+++|++.
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 99874 444554 67889999999983 35899999999999999987532 13456789999999999853
Q ss_pred ------------CEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCC----CEEEEEecCCcEEE
Q 001366 969 ------------GTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTAD----GYIACGSESNEVYA 1032 (1092)
Q Consensus 969 ------------~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg----~~lasgs~Dg~I~I 1032 (1092)
.+|++|+.|++|++||++... ...++..+.+|...|++++|+|++ .+||+|+.|++|+|
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-----~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~i 242 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG-----QWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFI 242 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTS-----CEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEE
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCC-----ccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEE
Confidence 589999999999999997321 123567788999999999999986 79999999999999
Q ss_pred EeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1033 YHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1033 wd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
|+......-.. .......|...|++++|+|++.+||+|+.||.|+||++
T Consensus 243 w~~~~~~~~~~----------~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 243 WTCDDASSNTW----------SPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp EECSSTTCCCC----------BCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred EEccCccccch----------hhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 99865311000 00112346788999999999999999999999999985
No 98
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=5.4e-33 Score=329.44 Aligned_cols=252 Identities=18% Similarity=0.114 Sum_probs=189.0
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
+|.+.+.++ |.|+||++... ..+..++.|+....... .+.....++..++...+||||+.+++....+...+
T Consensus 12 ~Y~i~~~LG~G~fg~V~~~~~~----~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~- 86 (444)
T 3soa_A 12 EYQLFEELGKGAFSVVRRCVKV----LAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY- 86 (444)
T ss_dssp HEEEEEEEEEC--CEEEEEEET----TTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEE-
T ss_pred CeEEEEEeccCCCeEEEEEEEC----CCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEE-
Confidence 455555444 78999999652 22455666554332222 22344556777888889999999877655443333
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc---cCC
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL---QSN 366 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~---~~~ 366 (1092)
.+||||.|++|.++|...+ .+++.++..+++||+.||+|||++||+||||||+|||++ .++
T Consensus 87 ---------------lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~ 150 (444)
T 3soa_A 87 ---------------LIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGA 150 (444)
T ss_dssp ---------------EEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTC
T ss_pred ---------------EEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCC
Confidence 3899999999999998765 477889999999999999999999999999999999998 457
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+||+|||+++.....
T Consensus 151 ~vkL~DFG~a~~~~~~---------------------------------------------------------------- 166 (444)
T 3soa_A 151 AVKLADFGLAIEVEGE---------------------------------------------------------------- 166 (444)
T ss_dssp CEEECCCSSCBCCCTT----------------------------------------------------------------
T ss_pred cEEEccCceeEEecCC----------------------------------------------------------------
Confidence 8999999998764310
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
.......+||++|+|||++.+..++.++|||||||+||+|+
T Consensus 167 ---------------------------------------~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell 207 (444)
T 3soa_A 167 ---------------------------------------QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILL 207 (444)
T ss_dssp ---------------------------------------CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHH
Confidence 00112467999999999999999999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhcc--ccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLR--DRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
++ |.............. ....++.+...++.+.+|+.+||++||.+|||+.|+|+||||...
T Consensus 208 ~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~ 274 (444)
T 3soa_A 208 VGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHR 274 (444)
T ss_dssp HSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred hCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence 86 444333322222222 223334556778999999999999999999999999999999764
No 99
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.6e-33 Score=314.93 Aligned_cols=245 Identities=16% Similarity=0.168 Sum_probs=181.1
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.++.|.||++... ..+..++.|+...... ........++..++...+|||++.+++....+...+
T Consensus 12 ~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~---------- 77 (292)
T 3o0g_A 12 EGTYGTVFKAKNR----ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLT---------- 77 (292)
T ss_dssp ECSSSEEEEEEET----TTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE----------
T ss_pred CCCCeEEEEEEEC----CCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEE----------
Confidence 3478999999763 2355566666543332 222345567777888999999999877755443333
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
++|||++| +|.+++......++..+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 78 ------lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 150 (292)
T 3o0g_A 78 ------LVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARA 150 (292)
T ss_dssp ------EEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred ------EEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccee
Confidence 38999986 66667766556788889999999999999999999999999999999999999999999999876
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
...+.
T Consensus 151 ~~~~~--------------------------------------------------------------------------- 155 (292)
T 3o0g_A 151 FGIPV--------------------------------------------------------------------------- 155 (292)
T ss_dssp CCSCC---------------------------------------------------------------------------
T ss_pred cCCcc---------------------------------------------------------------------------
Confidence 43100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC-CCccccchhhhHHHHHHcCC----CCcHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-CTTSSNIYSLGVLFFELFGR----FDSER 533 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~t~~sDIwSLGvll~ell~~----f~~~~ 533 (1092)
...+...||++|+|||++.+.. ++.++|||||||+||||+++ |....
T Consensus 156 ----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~ 207 (292)
T 3o0g_A 156 ----------------------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND 207 (292)
T ss_dssp ----------------------------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS
T ss_pred ----------------------------ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC
Confidence 0011457899999999998865 89999999999999999974 33332
Q ss_pred HHHHHHHhcc--ccC-------------------------CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001366 534 ALAAAMSDLR--DRI-------------------------LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1092)
Q Consensus 534 ~~~~~~~~~~--~~~-------------------------~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~ 586 (1092)
.........+ ... +.......++.+.+|+.+||++||.+|||++|+|+||||.
T Consensus 208 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~ 287 (292)
T 3o0g_A 208 VDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287 (292)
T ss_dssp HHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred HHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccc
Confidence 2222211111 100 0011234568889999999999999999999999999998
Q ss_pred hh
Q 001366 587 EF 588 (1092)
Q Consensus 587 ~~ 588 (1092)
+.
T Consensus 288 ~~ 289 (292)
T 3o0g_A 288 DF 289 (292)
T ss_dssp TC
T ss_pred cC
Confidence 74
No 100
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.6e-31 Score=356.06 Aligned_cols=313 Identities=16% Similarity=0.247 Sum_probs=263.4
Q ss_pred cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCC-----------
Q 001366 747 RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDS----------- 815 (1092)
Q Consensus 747 ~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~----------- 815 (1092)
.++++.|+.+++|+........ .+.+|...|++++|+|++++|++|+.|++|++||+.......
T Consensus 716 l~sg~~d~~v~vwd~~~~~~~~-----~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 790 (1249)
T 3sfz_A 716 LATGSNDFFLKLWDLNQKECRN-----TMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSS 790 (1249)
T ss_dssp EEEEETTSCEEEEETTSSSEEE-----EECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC---
T ss_pred EEEEeCCCeEEEEECCCcchhh-----eecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceeccccccccc
Confidence 3477899999999998776544 355899999999999999999999999999999986421000
Q ss_pred ----------cc---------------------------cccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEC
Q 001366 816 ----------VD---------------------------VYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDA 858 (1092)
Q Consensus 816 ----------~~---------------------------~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~ 858 (1092)
+. ........+|...|.+++|+|+ +.++++++.||+|++||+
T Consensus 791 ~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~~~dg~v~vwd~ 869 (1249)
T 3sfz_A 791 EDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPY-DHLAVIALSQYCVELWNI 869 (1249)
T ss_dssp -----CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSS-TTEEEEECSSSCEEEEET
T ss_pred CCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCC-CCEEEEEeCCCeEEEEEc
Confidence 00 0000112267889999999998 899999999999999999
Q ss_pred CCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCC-----------------------------------
Q 001366 859 CTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE----------------------------------- 903 (1092)
Q Consensus 859 ~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~----------------------------------- 903 (1092)
.++..+..+.+|...|++++|+| ++..|++++.|++|++||+.+
T Consensus 870 ~~~~~~~~~~~h~~~v~~v~~sp-dg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 948 (1249)
T 3sfz_A 870 DSRLKVADCRGHLSWVHGVMFSP-DGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQL 948 (1249)
T ss_dssp TTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEE
T ss_pred CCCceeeecCCCccceEEEEECC-CCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEE
Confidence 99999999999999999999999 889999999999999998642
Q ss_pred --------------------------------------------CceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeE
Q 001366 904 --------------------------------------------KNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRT 938 (1092)
Q Consensus 904 --------------------------------------------~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I 938 (1092)
++.+..+. |...|.+++|+|++. ++++++.||.|
T Consensus 949 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~i 1027 (1249)
T 3sfz_A 949 IAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGK-TLISSSEDSVI 1027 (1249)
T ss_dssp EEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSS-CEEEECSSSBE
T ss_pred EecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCC-EEEEEcCCCEE
Confidence 11112222 456789999999985 89999999999
Q ss_pred EEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCC
Q 001366 939 YCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTAD 1018 (1092)
Q Consensus 939 ~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg 1018 (1092)
++||+.++.. ..+.+|...|.++.|++++.+++++.|++|++||+. .+.+...+.+|...|++++|+|++
T Consensus 1028 ~vwd~~~~~~--~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~--------~~~~~~~~~~~~~~v~~~~~s~d~ 1097 (1249)
T 3sfz_A 1028 QVWNWQTGDY--VFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVI--------TGRIERDFTCHQGTVLSCAISSDA 1097 (1249)
T ss_dssp EEEETTTTEE--ECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETT--------TTCCCEEEECCSSCCCCEEECSSS
T ss_pred EEEECCCCce--EEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECC--------CCceeEEEcccCCcEEEEEECCCC
Confidence 9999998753 345689999999999998999999999999999998 456678899999999999999999
Q ss_pred CEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1019 GYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1019 ~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.+|++|+.|++|++||..++.++..+ .+|...|++++|+|++.+|++|+.||.|+||++
T Consensus 1098 ~~l~s~s~d~~v~iwd~~~~~~~~~l--------------~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~ 1156 (1249)
T 3sfz_A 1098 TKFSSTSADKTAKIWSFDLLSPLHEL--------------KGHNGCVRCSAFSLDGILLATGDDNGEIRIWNV 1156 (1249)
T ss_dssp SSCEEECCSSCCCEECSSSSSCSBCC--------------CCCSSCEEEEEECSSSSEEEEEETTSCCCEEES
T ss_pred CEEEEEcCCCcEEEEECCCcceeeee--------------ccCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 99999999999999999877655432 467889999999999999999999999999996
No 101
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=8.7e-32 Score=304.30 Aligned_cols=254 Identities=19% Similarity=0.210 Sum_probs=204.2
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecC-CCCEEEEEECCCc
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNY-IKNYLASADYDGV 852 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~-~~~~LaSgs~Dgt 852 (1092)
.+.+|...|++++|+|+|++||+|+.|++|+|||+.... ........+|...|.+++|+++ .+++|+||+.|++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~-----~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~ 82 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG-----QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK 82 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE-----EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC-----cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE
Confidence 356899999999999999999999999999999986411 1122345689999999999753 3789999999999
Q ss_pred EEEEECCCC--ceEEEeeccCccEEEEEEecCC-CCEEEEEeCCCcEEEEecCCCcee---eeEe-cCCceEEEEEccCC
Q 001366 853 VKLWDACTG--QTVSHYIEHEKRAWSVDFSQVH-PTKLASGSDDCSVKLWNINEKNSL---ATIK-NIANVCCVQFSAHS 925 (1092)
Q Consensus 853 V~IWD~~tg--~~i~~l~~h~~~V~sv~fsp~~-~~~laSgs~Dg~I~iWDl~~~~~l---~~l~-~~~~V~sl~fsp~~ 925 (1092)
|+|||+.++ +.+..+.+|...|++++|+|.. +.+|++|+.|++|++||++.+... ..+. |...|.+++|+|+.
T Consensus 83 v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 162 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAV 162 (316)
T ss_dssp EEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCC
T ss_pred EEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcccc
Confidence 999999887 4677788999999999999942 779999999999999999876432 2222 56789999999973
Q ss_pred ----------------CeEEEEEECCCeEEEEEcCCCC--cceEEecCCCCCeEEEEEcCC-----CEEEEEECCCeEEE
Q 001366 926 ----------------SHLLAFGSADYRTYCYDLRNAR--APWCVLAGHEKAVSYVKFLDS-----GTLVTASTDNKLKL 982 (1092)
Q Consensus 926 ----------------~~~latgs~Dg~I~vwDlr~~~--~~~~~l~~H~~~V~~v~fs~~-----~~L~Sgs~Dg~I~v 982 (1092)
..+|++|+.|+.|++||++... .+...+.+|...|.+++|++. .+|++++.|++|+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~i 242 (316)
T 3bg1_A 163 VPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFI 242 (316)
T ss_dssp CC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEE
T ss_pred CCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEE
Confidence 2489999999999999997543 245678899999999999854 68999999999999
Q ss_pred EEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCC
Q 001366 983 WDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRS 1036 (1092)
Q Consensus 983 WDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~ 1036 (1092)
||+..... .......+..|...|++++|+|++.+||+|+.|++|+||+..
T Consensus 243 w~~~~~~~----~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 243 WTCDDASS----NTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EECSSTTC----CCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEccCccc----cchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 99974211 011223456788999999999999999999999999999865
No 102
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.5e-33 Score=322.53 Aligned_cols=250 Identities=16% Similarity=0.157 Sum_probs=186.9
Q ss_pred hHHHhhhc--cccceeeeCCCCCcccccccccccccccccc--CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTT--MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
.|.+.+.+ +|.|.||++... ..+..++.|+..... .........++..++...+||+++.++.........+
T Consensus 6 ~y~~~~~lG~G~fg~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 81 (337)
T 1o6l_A 6 DFDYLKLLGKGTFGKVILVREK----ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC 81 (337)
T ss_dssp GEEEEEEEEECSSEEEEEEEET----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred HeEEEEEEecCCCeEEEEEEEC----CCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEE
Confidence 34444444 478999998752 235556666553221 1112233455666778889999998877665443333
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
.+|||++||+|.+++...+ .+++.+++.++.||+.||+|||++||+||||||+|||++.+|.+
T Consensus 82 ----------------lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~v 144 (337)
T 1o6l_A 82 ----------------FVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHI 144 (337)
T ss_dssp ----------------EEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCE
T ss_pred ----------------EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCE
Confidence 3899999999999997654 47777999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++.....
T Consensus 145 kL~DFG~a~~~~~~------------------------------------------------------------------ 158 (337)
T 1o6l_A 145 KITDFGLCKEGISD------------------------------------------------------------------ 158 (337)
T ss_dssp EECCCTTCBCSCCT------------------------------------------------------------------
T ss_pred EEeeccchhhcccC------------------------------------------------------------------
Confidence 99999998753210
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~ 528 (1092)
.......+||+.|+|||++.+..++.++|||||||+||||+++
T Consensus 159 -------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g 201 (337)
T 1o6l_A 159 -------------------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201 (337)
T ss_dssp -------------------------------------TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHS
T ss_pred -------------------------------------CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcC
Confidence 0001256799999999999999999999999999999999985
Q ss_pred ---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
|............+......| ...++.+.+||.+||++||.+|| ++.||++||||...
T Consensus 202 ~~Pf~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~ 267 (337)
T 1o6l_A 202 RLPFYNQDHERLFELILMEEIRFP--RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp SCSSCCSSHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred CCCCCCCCHHHHHHHHHcCCCCCC--CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence 544333322222222222212 23578999999999999999999 89999999999764
No 103
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.8e-33 Score=318.87 Aligned_cols=255 Identities=15% Similarity=0.154 Sum_probs=179.4
Q ss_pred hhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 212 ~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
++|.+.+.++ +.|.||++... ..+..++.|+..............++..++...+||||+.+++....+...+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~- 79 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNK----TTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLT- 79 (317)
T ss_dssp --------------CEEEEEECS----SSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEE-
T ss_pred cceeEeeEECCCCCEEEEEEEEC----CCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEE-
Confidence 3566665554 78999999763 2345566665533332223345566778888999999998877654333222
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-----HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-----~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~ 364 (1092)
++|||++| +|.+++.... ..++...++.++.||+.||+|||++||+||||||+|||++.
T Consensus 80 ---------------lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~ 143 (317)
T 2pmi_A 80 ---------------LVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINK 143 (317)
T ss_dssp ---------------EEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred ---------------EEEEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcC
Confidence 38999995 9999996542 34788899999999999999999999999999999999999
Q ss_pred CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 365 ~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
++.+||+|||+++....+.
T Consensus 144 ~~~~kl~Dfg~~~~~~~~~------------------------------------------------------------- 162 (317)
T 2pmi_A 144 RGQLKLGDFGLARAFGIPV------------------------------------------------------------- 162 (317)
T ss_dssp TCCEEECCCSSCEETTSCC-------------------------------------------------------------
T ss_pred CCCEEECcCccceecCCCc-------------------------------------------------------------
Confidence 9999999999987643100
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFF 523 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ 523 (1092)
......+||++|+|||++.+ ..++.++|||||||+||
T Consensus 163 ------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 200 (317)
T 2pmi_A 163 ------------------------------------------NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILA 200 (317)
T ss_dssp ------------------------------------------CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred ------------------------------------------ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHH
Confidence 00114578999999999987 46899999999999999
Q ss_pred HHcCC---CCcHHHHHHHHHhcc--ccCC------------------------------CCCCCCCChhHHHHHHhcccc
Q 001366 524 ELFGR---FDSERALAAAMSDLR--DRIL------------------------------PPSFLSENPKEAGFCLWQLHP 568 (1092)
Q Consensus 524 ell~~---f~~~~~~~~~~~~~~--~~~~------------------------------p~~~~~~~~~~~~li~~lL~~ 568 (1092)
||+++ |.+............ .... +......++.+.+|+.+||++
T Consensus 201 el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 280 (317)
T 2pmi_A 201 EMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQL 280 (317)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCS
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCC
Confidence 99986 544333222211111 1000 001123567889999999999
Q ss_pred CCCCCCCHHHHhhhhhhhhhhc
Q 001366 569 EPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 569 dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
||.+|||+.|+|+||||.+...
T Consensus 281 dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 281 NPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp SGGGSCCHHHHTTSGGGGGGCC
T ss_pred CcccCCCHHHHhCChhhhcccc
Confidence 9999999999999999987644
No 104
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.7e-30 Score=308.35 Aligned_cols=276 Identities=17% Similarity=0.338 Sum_probs=232.7
Q ss_pred ecCCCCC-EEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 775 FNNSANV-ICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 775 l~~h~~~-V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
+.+|... ++++.| ++++|++|+.|++|++||+... .......+|...|.+++|+++ + +|++|+.||+|
T Consensus 117 l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~-------~~~~~~~~h~~~V~~l~~~~~-~-~l~s~s~dg~i 185 (464)
T 3v7d_B 117 LRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK-------KFLLQLSGHDGGVWALKYAHG-G-ILVSGSTDRTV 185 (464)
T ss_dssp EECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEECST-T-EEEEEETTSCE
T ss_pred EcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCC-------cEEEEEeCCCcCEEEEEEcCC-C-EEEEEeCCCCE
Confidence 4577776 566666 5679999999999999998652 223344579999999999986 3 99999999999
Q ss_pred EEEECCCCceEEEeeccCccEEEEEEecC-CCCEEEEEeCCCcEEEEecCCCceee-----------------------e
Q 001366 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQV-HPTKLASGSDDCSVKLWNINEKNSLA-----------------------T 909 (1092)
Q Consensus 854 ~IWD~~tg~~i~~l~~h~~~V~sv~fsp~-~~~~laSgs~Dg~I~iWDl~~~~~l~-----------------------~ 909 (1092)
++||+.+++.+..+.+|...|.+++|++. ++..+++|+.|++|++||++++.... .
T Consensus 186 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (464)
T 3v7d_B 186 RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 265 (464)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE
T ss_pred EEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE
Confidence 99999999999999999999999999952 56889999999999999999876432 2
Q ss_pred Ee-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCC
Q 001366 910 IK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKR 987 (1092)
Q Consensus 910 l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~ 987 (1092)
+. +...|.++ ++++ .++++|+.|+.|++||+++.+ .+..+.+|...|.+++|+ ++.+|++|+.||+|++||++
T Consensus 266 ~~~~~~~v~~~--~~~~-~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~- 340 (464)
T 3v7d_B 266 LRGHMASVRTV--SGHG-NIVVSGSYDNTLIVWDVAQMK-CLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE- 340 (464)
T ss_dssp ECCCSSCEEEE--EEET-TEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT-
T ss_pred ccCccceEEEE--cCCC-CEEEEEeCCCeEEEEECCCCc-EEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC-
Confidence 22 45567776 4556 489999999999999999865 467788999999999998 67799999999999999998
Q ss_pred CCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEE
Q 001366 988 TSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSS 1067 (1092)
Q Consensus 988 ~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~s 1067 (1092)
.+.++.++.+|...|.+++|+ +.+|++|+.||.|++||...+....... +...+..
T Consensus 341 -------~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~---------------~~~~~~~ 396 (464)
T 3v7d_B 341 -------NGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH---------------HTNLSAI 396 (464)
T ss_dssp -------TTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE---------------CTTCCCE
T ss_pred -------CCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec---------------CCCCccE
Confidence 467888999999999999997 5799999999999999998876554432 3456788
Q ss_pred EEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1068 VCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1068 va~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
++|+|++.+|++|+ ||.|+||++
T Consensus 397 ~~~~~~~~~l~~~~-dg~i~iwd~ 419 (464)
T 3v7d_B 397 TTFYVSDNILVSGS-ENQFNIYNL 419 (464)
T ss_dssp EEEEECSSEEEEEE-TTEEEEEET
T ss_pred EEEEeCCCEEEEec-CCeEEEEEC
Confidence 99999999999998 999999996
No 105
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4e-34 Score=329.43 Aligned_cols=251 Identities=16% Similarity=0.173 Sum_probs=185.4
Q ss_pred hhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccC-CCCCCCccccceecCCC
Q 001366 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 212 ~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 286 (1092)
..|.+.+.++ +.|.||++... ..+..++.|+...... ........++..++... +||||+.++........
T Consensus 23 ~~y~~~~~lG~G~fg~V~~~~~~----~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~ 98 (353)
T 3txo_A 23 DNFEFIRVLGKGSFGKVMLARVK----ETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR 98 (353)
T ss_dssp CCEEEEEEEEEETTEEEEEEEET----TTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred hheEEEEEEeeCCCEEEEEEEEc----CCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE
Confidence 3455555554 78999999763 2355566665532111 11222333444455544 79999988777654433
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
.+ .+||||+|++|.+++...+ .+++.+++.|+.||+.||+|||++||+||||||+||||+.++
T Consensus 99 ~~----------------lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g 161 (353)
T 3txo_A 99 LF----------------FVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG 161 (353)
T ss_dssp EE----------------EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred EE----------------EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCC
Confidence 33 3899999999999997764 477889999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+||+|||+++.....
T Consensus 162 ~ikL~DFG~a~~~~~~---------------------------------------------------------------- 177 (353)
T 3txo_A 162 HCKLADFGMCKEGICN---------------------------------------------------------------- 177 (353)
T ss_dssp CEEECCCTTCBCSCC-----------------------------------------------------------------
T ss_pred CEEEccccceeecccC----------------------------------------------------------------
Confidence 9999999998753210
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
.......+||++|+|||++.+..++.++|||||||+||||+
T Consensus 178 ---------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 218 (353)
T 3txo_A 178 ---------------------------------------GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEML 218 (353)
T ss_dssp -----------------------------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHH
Confidence 00012568999999999999989999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH------HHHhhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT------REILQSEVTNEF 588 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa------~eiL~~~~~~~~ 588 (1092)
++ |............+......|. ..++.+.+||.+||++||.+||++ .||++||||.+.
T Consensus 219 ~G~~Pf~~~~~~~~~~~i~~~~~~~p~--~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~ 287 (353)
T 3txo_A 219 CGHAPFEAENEDDLFEAILNDEVVYPT--WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287 (353)
T ss_dssp HSSCSSCCSSHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence 85 6555444444444443333332 357889999999999999999999 899999999874
No 106
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.8e-30 Score=303.57 Aligned_cols=278 Identities=17% Similarity=0.272 Sum_probs=233.9
Q ss_pred ccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCccccc
Q 001366 741 IQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYY 820 (1092)
Q Consensus 741 ~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~ 820 (1092)
+|+++..|....|++|++|+....++...+. +.+|...|++|+|+|+|++||+|+.|++|+|||+... ..
T Consensus 112 ~wS~~n~lAvgld~tV~lWd~~tg~~~~~~~---~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~-------~~ 181 (420)
T 4gga_A 112 DWSSGNVLAVALDNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ-------KR 181 (420)
T ss_dssp EECTTSEEEEEETTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT-------EE
T ss_pred EECCCCEEEEEeCCEEEEEECCCCCEEEEEE---ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC-------cE
Confidence 4677778888899999999998877666554 5588999999999999999999999999999998752 23
Q ss_pred ceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCC-ceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEE
Q 001366 821 PAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG-QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLW 899 (1092)
Q Consensus 821 ~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg-~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iW 899 (1092)
.....+|...|.+++|++ .+|++|+.|+++++||.... ..+..+.+|...+..+.|+| ++..+++++.|+.+++|
T Consensus 182 ~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~-~g~~l~s~~~D~~v~i~ 257 (420)
T 4gga_A 182 LRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVW 257 (420)
T ss_dssp EEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEE
T ss_pred EEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecC-CCCeeeeeeccccceEE
Confidence 344567899999999975 59999999999999998865 46778899999999999999 89999999999999999
Q ss_pred ecCCCce----eeeE-ecCCceEEEEEccCCCeEEEEE--ECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEE
Q 001366 900 NINEKNS----LATI-KNIANVCCVQFSAHSSHLLAFG--SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTL 971 (1092)
Q Consensus 900 Dl~~~~~----l~~l-~~~~~V~sl~fsp~~~~~latg--s~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L 971 (1092)
|+.+++. +... .+...|.+++|+|.+..+++++ +.|++|++||++++.. ...+..| ..+.++.|+ +++.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~-~~~~~~~-~~v~~~~~~~~~~~l 335 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC-LSAVDAH-SQVCSILWSPHYKEL 335 (420)
T ss_dssp ESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE-EEEEECS-SCEEEEEEETTTTEE
T ss_pred eeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc-ceeeccc-cceeeeeecCCCCeE
Confidence 9987753 2233 3678899999999988888765 4799999999998764 4455444 467888887 67777
Q ss_pred EEEE--CCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCcee
Q 001366 972 VTAS--TDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPIT 1042 (1092)
Q Consensus 972 ~Sgs--~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~ 1042 (1092)
++++ .|+.|+|||+. ++.++.++.+|...|++++|+|+|.+||+||.|++|+|||+....+..
T Consensus 336 v~~sg~~d~~I~iwd~~--------~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~ 400 (420)
T 4gga_A 336 ISGHGFAQNQLVIWKYP--------TMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPAR 400 (420)
T ss_dssp EEEECTTTCCEEEEETT--------TCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC-
T ss_pred EEEEecCCCEEEEEECC--------CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccc
Confidence 7765 79999999998 467889999999999999999999999999999999999987655443
No 107
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=9.4e-31 Score=293.90 Aligned_cols=267 Identities=15% Similarity=0.248 Sum_probs=221.6
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecC-CCCEEEEEECCCc
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNY-IKNYLASADYDGV 852 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~-~~~~LaSgs~Dgt 852 (1092)
.+.+|...|++++|+|++++||+|+.|++|+|||+.... ..........+|...|.+++|+|. ++.+|++++.||+
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDT---SNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSS---CCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCC---CcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 356899999999999999999999999999999987521 111223344579999999999984 2889999999999
Q ss_pred EEEEECCCC---------ceEEEeeccCccEEEEEEecCC--CCEEEEEeCCCcEEEEecCCCceeeeEe----------
Q 001366 853 VKLWDACTG---------QTVSHYIEHEKRAWSVDFSQVH--PTKLASGSDDCSVKLWNINEKNSLATIK---------- 911 (1092)
Q Consensus 853 V~IWD~~tg---------~~i~~l~~h~~~V~sv~fsp~~--~~~laSgs~Dg~I~iWDl~~~~~l~~l~---------- 911 (1092)
|++||+.++ +.+..+.+|...|++++|+| + +.+|++++.|+.|++||+++++.+..+.
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI 161 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccc
Confidence 999999887 56888889999999999999 6 8899999999999999999887665442
Q ss_pred ----cCCceEEEEEccC--CCeEEEEEECCCeEEEEEcCCCCc-ceEEecCCCCCeEEEEEcCC-----CEEEEEECCCe
Q 001366 912 ----NIANVCCVQFSAH--SSHLLAFGSADYRTYCYDLRNARA-PWCVLAGHEKAVSYVKFLDS-----GTLVTASTDNK 979 (1092)
Q Consensus 912 ----~~~~V~sl~fsp~--~~~~latgs~Dg~I~vwDlr~~~~-~~~~l~~H~~~V~~v~fs~~-----~~L~Sgs~Dg~ 979 (1092)
+...+.+++|+|+ +..++++++.|+.+.+|+...... .+..+.+|...|.+++|+++ .+|++|+.||.
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 162 PPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp CCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred ccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence 4567999999997 235999999999998888776543 35677899999999999955 58999999999
Q ss_pred EEEEEcCCCCCCC--------------------------------------CCCCceeEEEcCCCCCeEEEEEecCCCEE
Q 001366 980 LKLWDLKRTSHTG--------------------------------------PSTNACSLTFSGHTNEKNFVGLSTADGYI 1021 (1092)
Q Consensus 980 I~vWDl~~~~~~~--------------------------------------~~~~~~~~~l~~h~~~V~~v~~spdg~~l 1021 (1092)
|++||++...... .....++..+.+|...|++++|+|++.+|
T Consensus 242 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 321 (351)
T 3f3f_A 242 IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTIL 321 (351)
T ss_dssp EEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCE
T ss_pred EEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEE
Confidence 9999998532100 00125677888999999999999999999
Q ss_pred EEEecCCcEEEEeCCCCCceeee
Q 001366 1022 ACGSESNEVYAYHRSLPMPITSY 1044 (1092)
Q Consensus 1022 asgs~Dg~I~Iwd~~~~~~i~~~ 1044 (1092)
++|+.||.|+||++..++.+..+
T Consensus 322 ~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 322 SSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp EEEETTSCEEEEEECTTSCEEEE
T ss_pred EEecCCCcEEEEecCcCcchhhe
Confidence 99999999999999887766544
No 108
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.9e-31 Score=309.55 Aligned_cols=279 Identities=16% Similarity=0.332 Sum_probs=233.0
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEE
Q 001366 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKL 855 (1092)
Q Consensus 776 ~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~I 855 (1092)
.+|...|.+++| ++++|++|+.|++|+|||+.+. .......+|...|.+++| + +++|++|+.||+|++
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~l~~--~-~~~l~sg~~dg~i~v 197 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTL-------ECKRILTGHTGSVLCLQY--D-ERVIITGSSDSTVRV 197 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSC-------CEEEEECCCSSCEEEEEC--C-SSEEEEEETTSCEEE
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCC-------eEEEEEcCCCCcEEEEEE--C-CCEEEEEcCCCeEEE
Confidence 367788998877 7899999999999999998652 223345579999999999 3 679999999999999
Q ss_pred EECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCcee---eeEe-cCCceEEEEEccCCCeEEEE
Q 001366 856 WDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSL---ATIK-NIANVCCVQFSAHSSHLLAF 931 (1092)
Q Consensus 856 WD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l---~~l~-~~~~V~sl~fsp~~~~~lat 931 (1092)
||+.+++.+..+.+|...|.+++|++ ..+++|+.|++|++||++++..+ ..+. +...|.+++| ++ .++++
T Consensus 198 wd~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~s 271 (435)
T 1p22_A 198 WDVNTGEMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DD-KYIVS 271 (435)
T ss_dssp EESSSCCEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ET-TEEEE
T ss_pred EECCCCcEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CC-CEEEE
Confidence 99999999999999999999999965 59999999999999999988765 3333 6778999999 44 48999
Q ss_pred EECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEE
Q 001366 932 GSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNF 1011 (1092)
Q Consensus 932 gs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~ 1011 (1092)
|+.||.|++||+++.+ .+..+.+|...|.++.|. +.++++|+.||+|++||++ .+.++.++.+|...|++
T Consensus 272 ~~~dg~i~vwd~~~~~-~~~~~~~~~~~v~~~~~~-~~~l~~g~~dg~i~iwd~~--------~~~~~~~~~~h~~~v~~ 341 (435)
T 1p22_A 272 ASGDRTIKVWNTSTCE-FVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIE--------CGACLRVLEGHEELVRC 341 (435)
T ss_dssp EETTSEEEEEETTTCC-EEEEEECCSSCEEEEEEE-TTEEEEEETTSCEEEEETT--------TCCEEEEECCCSSCEEE
T ss_pred EeCCCeEEEEECCcCc-EEEEEcCCCCcEEEEEeC-CCEEEEEeCCCeEEEEECC--------CCCEEEEEeCCcCcEEE
Confidence 9999999999999875 467788999999999995 7899999999999999998 45778899999999999
Q ss_pred EEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1012 VGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1012 v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
++| ++.+|++|+.||.|++||+..+...... ..........+|...|.+++| ++.+|++|+.||.|+||++
T Consensus 342 ~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~-----~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~ 412 (435)
T 1p22_A 342 IRF--DNKRIVSGAYDGKIKVWDLVAALDPRAP-----AGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDF 412 (435)
T ss_dssp EEC--CSSEEEEEETTSCEEEEEHHHHTSTTSC-----TTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-
T ss_pred EEe--cCCEEEEEeCCCcEEEEECCCCCCcccc-----ccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEEC
Confidence 988 7889999999999999997654311000 000011233578889999999 7889999999999999986
No 109
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.3e-30 Score=289.82 Aligned_cols=285 Identities=20% Similarity=0.210 Sum_probs=238.4
Q ss_pred ccchhhhhhccccccCCCCc-EEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 001366 728 DRENLFLAQQDQEIQNPTDR-LGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIF 806 (1092)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~-l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iw 806 (1092)
+|.+.+..+. ++|++. +....|+.+++|++........+......+|...|.+++|+|++++|++++.|+.|++|
T Consensus 49 ~h~~~v~~~~----~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 49 NHGEVVCAVT----ISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp CCSSCCCEEE----ECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred cCCCceEEEE----EecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 3455444443 345443 33334999999998765433333322334799999999999999999999999999999
Q ss_pred EcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCE
Q 001366 807 EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK 886 (1092)
Q Consensus 807 d~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~ 886 (1092)
|+.... .........|...|.+++|+|+ +.+|++++.||.|++||+.+++.+..+..|...|.+++|+| ++..
T Consensus 125 d~~~~~-----~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~ 197 (337)
T 1gxr_A 125 DLAAPT-----PRIKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN-DGTK 197 (337)
T ss_dssp ECCCC-------EEEEEEECSSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSE
T ss_pred ECCCCC-----cceeeecccCCCceEEEEECCC-CCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECC-CCCE
Confidence 987521 1122344568889999999997 89999999999999999999999999999999999999999 8899
Q ss_pred EEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc
Q 001366 887 LASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL 966 (1092)
Q Consensus 887 laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs 966 (1092)
|++++.|+.|++||+++++.+..+.+...+.+++|+|++. ++++++.|+.|++||+++.+ ...+..|...|.+++|+
T Consensus 198 l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~i~~~~~~~~~--~~~~~~~~~~v~~~~~~ 274 (337)
T 1gxr_A 198 LWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGE-WLAVGMESSNVEVLHVNKPD--KYQLHLHESCVLSLKFA 274 (337)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSS-EEEEEETTSCEEEEETTSSC--EEEECCCSSCEEEEEEC
T ss_pred EEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCC-EEEEEcCCCcEEEEECCCCC--eEEEcCCccceeEEEEC
Confidence 9999999999999999999999999999999999999995 89999999999999999865 35678899999999999
Q ss_pred -CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeC
Q 001366 967 -DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHR 1035 (1092)
Q Consensus 967 -~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~ 1035 (1092)
++.+|++++.||.|++||+.+ +..+. ...|...+++++|+|++.+|++++.||.|++|++
T Consensus 275 ~~~~~l~~~~~dg~i~~~~~~~--------~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 275 YCGKWFVSTGKDNLLNAWRTPY--------GASIF-QSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTT--------CCEEE-EEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCCCEEEEecCCCcEEEEECCC--------CeEEE-EecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 677899999999999999984 33333 3458889999999999999999999999999985
No 110
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.3e-30 Score=328.97 Aligned_cols=338 Identities=18% Similarity=0.246 Sum_probs=269.8
Q ss_pred hhhccchhhhhhccccccCCCCc--EEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCc
Q 001366 725 LLRDRENLFLAQQDQEIQNPTDR--LGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKK 802 (1092)
Q Consensus 725 ~l~~~~~~~~~~~~~~~~~~~~~--l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~ 802 (1092)
.+.+|.+.+..+. ++|++. +.+..|+.+++|++........ +..|...|++++|+|++++||+|+.|+.
T Consensus 8 ~~~~h~~~v~~i~----~sp~~~~la~~~~~g~v~iwd~~~~~~~~~-----~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 78 (814)
T 3mkq_A 8 TFSNRSDRVKGID----FHPTEPWVLTTLYSGRVEIWNYETQVEVRS-----IQVTETPVRAGKFIARKNWIIVGSDDFR 78 (814)
T ss_dssp EEEEECSCEEEEE----ECSSSSEEEEEETTSEEEEEETTTTEEEEE-----EECCSSCEEEEEEEGGGTEEEEEETTSE
T ss_pred eeecCCCceEEEE----ECCCCCEEEEEeCCCEEEEEECCCCceEEE-----EecCCCcEEEEEEeCCCCEEEEEeCCCe
Confidence 4556666665553 456654 3566799999999887655443 4589999999999999999999999999
Q ss_pred EEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCC-ceEEEeeccCccEEEEEEec
Q 001366 803 IKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG-QTVSHYIEHEKRAWSVDFSQ 881 (1092)
Q Consensus 803 I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg-~~i~~l~~h~~~V~sv~fsp 881 (1092)
|+|||+.+. .......+|...|.+++|+|+ +.+|++++.||+|++||+.++ .....+.+|...|.+++|+|
T Consensus 79 i~vw~~~~~-------~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p 150 (814)
T 3mkq_A 79 IRVFNYNTG-------EKVVDFEAHPDYIRSIAVHPT-KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNP 150 (814)
T ss_dssp EEEEETTTC-------CEEEEEECCSSCEEEEEECSS-SSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEET
T ss_pred EEEEECCCC-------cEEEEEecCCCCEEEEEEeCC-CCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEc
Confidence 999998752 222344568999999999998 889999999999999999887 67788889999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCceeeeEec--CCceEEEEEcc--CCCeEEEEEECCCeEEEEEcCCCCcceEEecCCC
Q 001366 882 VHPTKLASGSDDCSVKLWNINEKNSLATIKN--IANVCCVQFSA--HSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHE 957 (1092)
Q Consensus 882 ~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~--~~~V~sl~fsp--~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~ 957 (1092)
.++..|++++.||+|++||+.++.....+.. ...+.+++|+| ++. ++++|+.||.|++||+++.+ .+..+.+|.
T Consensus 151 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~-~~~~~~~~~ 228 (814)
T 3mkq_A 151 KDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQTKS-CVATLEGHM 228 (814)
T ss_dssp TEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCC-EEEEECTTSEEEEEETTTTE-EEEEEECCS
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCC-EEEEEeCCCEEEEEECCCCc-EEEEEcCCC
Confidence 6678999999999999999998888777763 37899999999 774 89999999999999998865 467788999
Q ss_pred CCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCC--EEEEEecCCcEEEEe
Q 001366 958 KAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADG--YIACGSESNEVYAYH 1034 (1092)
Q Consensus 958 ~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~--~lasgs~Dg~I~Iwd 1034 (1092)
..|.+++|+ ++.+|++++.||.|++||+. .+..+..+..|...+++++|+|++. ++++|+ ++.+.+|+
T Consensus 229 ~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~ 299 (814)
T 3mkq_A 229 SNVSFAVFHPTLPIIISGSEDGTLKIWNSS--------TYKVEKTLNVGLERSWCIATHPTGRKNYIASGF-DNGFTVLS 299 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEETT--------TCSEEEEECCSSSSEEEEEECTTCGGGEEEEEE-TTEEEEEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCCeEEEEECC--------CCcEEEEeecCCCcEEEEEEccCCCceEEEEEe-CCCEEEEE
Confidence 999999999 56689999999999999998 4567888999999999999999987 455555 66688998
Q ss_pred CCCCCceeeeec-c------ccCC----------------CCC------ccccCCCCCCEEEEEEeCCCCEEEEEecCCe
Q 001366 1035 RSLPMPITSYKF-G------SIDP----------------ISG------KETDDDNGLFVSSVCWRRRSDMVVAANSSGC 1085 (1092)
Q Consensus 1035 ~~~~~~i~~~~~-~------~~~~----------------i~~------~~~~~~h~~~V~sva~spd~~~Lasgs~DG~ 1085 (1092)
.....+...+.. + ..+. ..+ ......+...+.+++|+|++++|++++ ||.
T Consensus 300 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~ 378 (814)
T 3mkq_A 300 LGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGE 378 (814)
T ss_dssp CSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTE
T ss_pred cCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCE
Confidence 766544333321 0 0000 000 011133455688899999999888887 888
Q ss_pred EEEEEc
Q 001366 1086 IKVLQM 1091 (1092)
Q Consensus 1086 V~vW~l 1091 (1092)
+.||++
T Consensus 379 ~~i~~~ 384 (814)
T 3mkq_A 379 YVIYTA 384 (814)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 888874
No 111
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=8.9e-31 Score=328.28 Aligned_cols=292 Identities=16% Similarity=0.194 Sum_probs=230.5
Q ss_pred hhhhccchhhhhhccccccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Q 001366 724 DLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKI 803 (1092)
Q Consensus 724 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I 803 (1092)
..+++|.+.+.++.+.. ...+-.++++.|+++++|++.............+.+|...|++++|+|++++|++|+.|++|
T Consensus 376 ~~l~~H~~~V~~v~~~~-~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPI-DNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEEECCSSCEEEEECCT-TCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hhcccCCceeEEEEecC-CCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 34678888877665411 11222458899999999998643221112223567999999999999999999999999999
Q ss_pred EEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEe---eccCccEEEEEEe
Q 001366 804 KIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHY---IEHEKRAWSVDFS 880 (1092)
Q Consensus 804 ~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l---~~h~~~V~sv~fs 880 (1092)
+|||+... .......+|...|.+++|+|+ +.+|+||+.|++|+|||+......... .+|...|.+++|+
T Consensus 455 ~vwd~~~~-------~~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 455 RLWDLAAG-------VSTRRFVGHTKDVLSVAFSLD-NRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp EEEETTTT-------EEEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEEC
T ss_pred EEEECCCC-------cceeEEeCCCCCEEEEEEeCC-CCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEe
Confidence 99998752 223345689999999999998 889999999999999998654433322 3688899999999
Q ss_pred cCCC--CEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCC
Q 001366 881 QVHP--TKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHE 957 (1092)
Q Consensus 881 p~~~--~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~ 957 (1092)
| ++ ..|++|+.|++|++||++++++..++. |...|++++|+|++. +|++|+.|+.|++||+++++. +..+. +.
T Consensus 527 ~-~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~-~l~sg~~Dg~i~iwd~~~~~~-~~~~~-~~ 602 (694)
T 3dm0_A 527 P-NTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGS-LCASGGKDGVVLLWDLAEGKK-LYSLE-AN 602 (694)
T ss_dssp S-CSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSBCEEEETTTTEE-EECCB-CS
T ss_pred C-CCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCce-EEEec-CC
Confidence 9 54 579999999999999999999888887 678899999999995 999999999999999998764 33443 45
Q ss_pred CCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcC-------------------CCCCeEEEEEecCC
Q 001366 958 KAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG-------------------HTNEKNFVGLSTAD 1018 (1092)
Q Consensus 958 ~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~-------------------h~~~V~~v~~spdg 1018 (1092)
..|.+++|++++.+++++.|+.|+|||+.+. .++..+.. +...+++++|+|+|
T Consensus 603 ~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg 674 (694)
T 3dm0_A 603 SVIHALCFSPNRYWLCAATEHGIKIWDLESK--------SIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADG 674 (694)
T ss_dssp SCEEEEEECSSSSEEEEEETTEEEEEETTTT--------EEEEEECCCCC----------------CCCCEEEEEECTTS
T ss_pred CcEEEEEEcCCCcEEEEEcCCCEEEEECCCC--------CChhhhccccccccccccccccccCCceeEEeeeEEEcCCC
Confidence 6799999997777777777888999999843 33333322 22247889999999
Q ss_pred CEEEEEecCCcEEEEeCC
Q 001366 1019 GYIACGSESNEVYAYHRS 1036 (1092)
Q Consensus 1019 ~~lasgs~Dg~I~Iwd~~ 1036 (1092)
.+|++|+.||.|+||++.
T Consensus 675 ~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 675 STLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp SEEEEEETTSEEEEEEC-
T ss_pred CEEEEEcCCCeEEEEecc
Confidence 999999999999999974
No 112
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.8e-33 Score=322.12 Aligned_cols=250 Identities=16% Similarity=0.143 Sum_probs=187.9
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCch-----hhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-----DAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
|.+.+.++ +.|+||++... ..+..++.|+........ ......++..++...+||||+.+++.......
T Consensus 14 y~~~~~LG~G~fg~V~~~~~~----~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 14 YDIGEELGSGQFAIVKKCREK----STGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp EEEEEEEEEETTEEEEEEEET----TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred eEEeeEEeeCcCEEEEEEEEC----CCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 55555554 78999999762 235556666543222111 12334566777888899999998776554333
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
.+ .+||||+|++|.++|...+ .+++.+++.+++||+.||+|||++||+||||||+|||++..+
T Consensus 90 ~~----------------lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~ 152 (361)
T 2yab_A 90 VV----------------LILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN 152 (361)
T ss_dssp EE----------------EEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTT
T ss_pred EE----------------EEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCC
Confidence 33 3899999999999997654 577889999999999999999999999999999999998877
Q ss_pred ----cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccC
Q 001366 367 ----QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETAN 442 (1092)
Q Consensus 367 ----~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1092)
.+||+|||+++.....
T Consensus 153 ~~~~~vkl~DFG~a~~~~~~------------------------------------------------------------ 172 (361)
T 2yab_A 153 IPIPHIKLIDFGLAHEIEDG------------------------------------------------------------ 172 (361)
T ss_dssp SSSCCEEECCCSSCEECCTT------------------------------------------------------------
T ss_pred CCccCEEEEecCCceEcCCC------------------------------------------------------------
Confidence 7999999998764310
Q ss_pred ccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHH
Q 001366 443 ESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLF 522 (1092)
Q Consensus 443 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll 522 (1092)
......+||+.|+|||++.+..++.++|||||||++
T Consensus 173 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil 208 (361)
T 2yab_A 173 --------------------------------------------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208 (361)
T ss_dssp --------------------------------------------CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred --------------------------------------------CccccCCCCccEECchHHcCCCCCccccHHHHHHHH
Confidence 001245799999999999999999999999999999
Q ss_pred HHHcCC---CCcHHHHHHHHHhccccC-CC-CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 523 FELFGR---FDSERALAAAMSDLRDRI-LP-PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 523 ~ell~~---f~~~~~~~~~~~~~~~~~-~p-~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|+|+++ |.+............... ++ +.+...++.+.+||.+||.+||.+|||+.|+|+||||...
T Consensus 209 ~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 279 (361)
T 2yab_A 209 YILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (361)
T ss_dssp HHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence 999986 544433333322222221 12 2345668889999999999999999999999999999753
No 113
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=5.7e-33 Score=314.01 Aligned_cols=250 Identities=16% Similarity=0.168 Sum_probs=183.3
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCch-hhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+.+.++ +.|.||++...+ +..++.|+........ ......++..++...+||||+.+++....+...+
T Consensus 22 ~y~~~~~lG~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~- 95 (311)
T 3niz_A 22 KYQKLEKVGEGTYGVVYKAKDSQ-----GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLT- 95 (311)
T ss_dssp EEEEEEEEEECSSCEEEEEEETT-----SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEE-
T ss_pred hhHhhhhccCCCCeEEEEEEECC-----CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEE-
Confidence 355555444 789999998643 4556666553322221 2244556777888889999998877654333222
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
++|||++| +|.+++......++..+++.+++||+.||+|||++||+||||||+|||++.++.+|
T Consensus 96 ---------------lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~k 159 (311)
T 3niz_A 96 ---------------LVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALK 159 (311)
T ss_dssp ---------------EEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEE
T ss_pred ---------------EEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEE
Confidence 38999986 89999987777788889999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+++....+
T Consensus 160 l~Dfg~a~~~~~~------------------------------------------------------------------- 172 (311)
T 3niz_A 160 LADFGLARAFGIP------------------------------------------------------------------- 172 (311)
T ss_dssp ECCCTTCEETTSC-------------------------------------------------------------------
T ss_pred EccCcCceecCCC-------------------------------------------------------------------
Confidence 9999998764310
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~ 528 (1092)
....+..+||++|+|||++.+ ..++.++|||||||+||||+++
T Consensus 173 ------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g 216 (311)
T 3niz_A 173 ------------------------------------VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216 (311)
T ss_dssp ------------------------------------CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHS
T ss_pred ------------------------------------cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhC
Confidence 001124578999999999987 5689999999999999999985
Q ss_pred ---CCcHH---HHHHHHHhccccCCCC--------------------------CCCCCChhHHHHHHhccccCCCCCCCH
Q 001366 529 ---FDSER---ALAAAMSDLRDRILPP--------------------------SFLSENPKEAGFCLWQLHPEPLSRPTT 576 (1092)
Q Consensus 529 ---f~~~~---~~~~~~~~~~~~~~p~--------------------------~~~~~~~~~~~li~~lL~~dP~~Rpsa 576 (1092)
|.+.. .....+..+ ....+. .....++++.+|+.+||++||.+|||+
T Consensus 217 ~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 295 (311)
T 3niz_A 217 KPLFPGVTDDDQLPKIFSIL-GTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISA 295 (311)
T ss_dssp SCSCCCSSTTTHHHHHHHHH-CCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCH
T ss_pred CCCCCCCChHHHHHHHHHHH-CCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCH
Confidence 43322 122222211 111111 122356788999999999999999999
Q ss_pred HHHhhhhhhhhh
Q 001366 577 REILQSEVTNEF 588 (1092)
Q Consensus 577 ~eiL~~~~~~~~ 588 (1092)
.|+|+||||.+.
T Consensus 296 ~ell~hp~f~~~ 307 (311)
T 3niz_A 296 RDAMNHPYFKDL 307 (311)
T ss_dssp HHHHTSGGGTTS
T ss_pred HHHhcCcccccC
Confidence 999999999875
No 114
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=5.6e-30 Score=298.94 Aligned_cols=280 Identities=14% Similarity=0.240 Sum_probs=233.9
Q ss_pred ccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCccccc
Q 001366 741 IQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYY 820 (1092)
Q Consensus 741 ~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~ 820 (1092)
.+++...+.+..|+.+++|+....+....+.. .|...|++++|+|++++|++|+.|+.|+|||+... ..
T Consensus 100 ~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~----~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~-------~~ 168 (401)
T 4aez_A 100 DWSNLNVVAVALERNVYVWNADSGSVSALAET----DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ-------TK 168 (401)
T ss_dssp EECTTSEEEEEETTEEEEEETTTCCEEEEEEC----CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC-------CE
T ss_pred eecCCCEEEEECCCeEEEeeCCCCcEeEeeec----CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC-------eE
Confidence 35666778889999999999987766554432 48999999999999999999999999999998752 12
Q ss_pred ceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECC-CCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEE
Q 001366 821 PAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDAC-TGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLW 899 (1092)
Q Consensus 821 ~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~-tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iW 899 (1092)
.....+|...|.+++|+ +.+|++++.||+|++||+. .+..+..+.+|...|.+++|+| ++.+|++|+.|+.|++|
T Consensus 169 ~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iw 244 (401)
T 4aez_A 169 LRTMAGHQARVGCLSWN---RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRS-DGLQLASGGNDNVVQIW 244 (401)
T ss_dssp EEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEE
T ss_pred EEEecCCCCceEEEEEC---CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEc
Confidence 23345789999999995 4699999999999999998 4667888999999999999999 89999999999999999
Q ss_pred ecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEE--CCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEE
Q 001366 900 NINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGS--ADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTAS 975 (1092)
Q Consensus 900 Dl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs--~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs 975 (1092)
|+++++++..+. +...|.+++|+|++..++++|+ .|+.|++||+++++. +..+. |...|.+++|+ ++.+|++++
T Consensus 245 d~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~-~~~~~-~~~~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 245 DARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR-VNTVD-AGSQVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp ETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE-EEEEE-CSSCEEEEEECSSSSEEEEEE
T ss_pred cCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE-EEEEe-CCCcEEEEEECCCCCeEEEEe
Confidence 999999888886 6788999999999888888876 799999999998764 44443 66789999999 667888744
Q ss_pred --CCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceee
Q 001366 976 --TDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITS 1043 (1092)
Q Consensus 976 --~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~ 1043 (1092)
.||.|++||+.+.. ......+.+|...|.+++|+|++.+|++|+.||.|++|++..++.+..
T Consensus 323 g~~dg~i~v~~~~~~~------~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 323 GFPDNNLSIWSYSSSG------LTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp CTTTCEEEEEEEETTE------EEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC------
T ss_pred ecCCCcEEEEecCCcc------ceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccc
Confidence 89999999998421 233445778999999999999999999999999999999988876654
No 115
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.98 E-value=3.3e-33 Score=315.89 Aligned_cols=244 Identities=23% Similarity=0.231 Sum_probs=179.7
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhh-hhccCCCCCCCccccceecCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAM-MVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
|.+.+.+ +|.|.||+|... ..+..++.|+...... ........++.. +.....|||++.++.....+...+
T Consensus 59 y~~~~~LG~G~~g~Vy~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~- 133 (311)
T 3p1a_A 59 FQRLSRLGHGSYGEVFKVRSK----EDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILY- 133 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEET----TTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE-
T ss_pred eeeeheeccCCCeEEEEEEEC----CCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEE-
Confidence 4444344 488999999763 2255666665433222 222223333333 333448999998877655433333
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
++|||+ +++|.+++...+..+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 134 ---------------lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~k 197 (311)
T 3p1a_A 134 ---------------LQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCK 197 (311)
T ss_dssp ---------------EEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEE
T ss_pred ---------------EEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEE
Confidence 378988 7799999988777799999999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+++......
T Consensus 198 l~DFG~a~~~~~~~------------------------------------------------------------------ 211 (311)
T 3p1a_A 198 LGDFGLLVELGTAG------------------------------------------------------------------ 211 (311)
T ss_dssp ECCCTTCEECC---------------------------------------------------------------------
T ss_pred EccceeeeecccCC------------------------------------------------------------------
Confidence 99999986643100
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC-
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~- 528 (1092)
......||+.|+|||++.+ .++.++|||||||+||||+++
T Consensus 212 --------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~ 252 (311)
T 3p1a_A 212 --------------------------------------AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNM 252 (311)
T ss_dssp -----------------------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTC
T ss_pred --------------------------------------CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCC
Confidence 0113468999999999886 799999999999999999986
Q ss_pred --CCcHHHHHHHHHhccccCCCCC-CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
|...... ..+.....++. ....++.+.+|+.+||++||.+|||+.|+|+||||++
T Consensus 253 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 253 ELPHGGEGW----QQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp CCCSSHHHH----HHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred CCCCCccHH----HHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence 3333222 22233333332 3345788999999999999999999999999999975
No 116
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.98 E-value=5.9e-33 Score=319.46 Aligned_cols=251 Identities=17% Similarity=0.145 Sum_probs=185.5
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccc----cCchhhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTT----TMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
.|.+.+.+ +|.|+||++... ..+..++.|+.... ..........++..++...+||||+.+++....+..
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 100 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINR----ETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM 100 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEET----TTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred ceEEeeEEeeCCCEEEEEEEEC----CCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 34554444 478999999652 22456666654211 111123344566677888899999998876554443
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL 363 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~---~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~ 363 (1092)
.+ ++||||+|++|.+++... +..+++.+++.+++||+.||+|||++||+||||||+|||++
T Consensus 101 ~~----------------lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~ 164 (351)
T 3c0i_A 101 LY----------------MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLA 164 (351)
T ss_dssp EE----------------EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred EE----------------EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEe
Confidence 33 389999999999988543 34578889999999999999999999999999999999998
Q ss_pred cCCc---EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccc
Q 001366 364 QSNQ---VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIET 440 (1092)
Q Consensus 364 ~~~~---vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1092)
..+. +|++|||+++......
T Consensus 165 ~~~~~~~vkl~Dfg~a~~~~~~~--------------------------------------------------------- 187 (351)
T 3c0i_A 165 SKENSAPVKLGGFGVAIQLGESG--------------------------------------------------------- 187 (351)
T ss_dssp SSSTTCCEEECCCTTCEECCTTS---------------------------------------------------------
T ss_pred cCCCCCcEEEecCcceeEecCCC---------------------------------------------------------
Confidence 7655 9999999987644100
Q ss_pred cCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhH
Q 001366 441 ANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGV 520 (1092)
Q Consensus 441 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGv 520 (1092)
......+||++|+|||++.+..++.++|||||||
T Consensus 188 ----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 221 (351)
T 3c0i_A 188 ----------------------------------------------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGV 221 (351)
T ss_dssp ----------------------------------------------CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHH
T ss_pred ----------------------------------------------eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHH
Confidence 0011457999999999999999999999999999
Q ss_pred HHHHHcCC---CCcHHHHHHHHHhcccc---CCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 521 LFFELFGR---FDSERALAAAMSDLRDR---ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 521 ll~ell~~---f~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
+||||+++ |..... ..+..+... ..++.+...++.+.+||.+||++||.+|||+.++|+||||.+.
T Consensus 222 il~~ll~g~~pf~~~~~--~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 293 (351)
T 3c0i_A 222 ILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER 293 (351)
T ss_dssp HHHHHHHSSCSSCSSHH--HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred HHHHHHHCCCCCCCcHH--HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence 99999986 444322 122222211 1222345668889999999999999999999999999999864
No 117
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.98 E-value=2.2e-33 Score=319.26 Aligned_cols=248 Identities=14% Similarity=0.155 Sum_probs=179.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|.||++... ..+..++.|+..............++..++...+|||++.+++....+...+
T Consensus 12 ~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~----------- 76 (324)
T 3mtl_A 12 EGTYATVYKGKSK----LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLT----------- 76 (324)
T ss_dssp ECSSEEEEEEEET----TTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEE-----------
T ss_pred CCCCEEEEEEEEC----CCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEE-----------
Confidence 3478999999763 2245566665533222222223446777888899999998877654333222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
++|||++| +|.+++...+..++..+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 77 -----lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 150 (324)
T 3mtl_A 77 -----LVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAK 150 (324)
T ss_dssp -----EEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC
T ss_pred -----EEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccc
Confidence 38999985 999999888778899899999999999999999999999999999999999999999999998753
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
..+
T Consensus 151 ~~~----------------------------------------------------------------------------- 153 (324)
T 3mtl_A 151 SIP----------------------------------------------------------------------------- 153 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 310
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
.......+||++|+|||++.+ ..++.++|||||||+||||+++ |.+....
T Consensus 154 --------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~ 207 (324)
T 3mtl_A 154 --------------------------TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE 207 (324)
T ss_dssp -----------------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred --------------------------ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 001114578999999999987 5689999999999999999985 5544332
Q ss_pred HHHHH--hccccCCCC--------------------------CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 536 AAAMS--DLRDRILPP--------------------------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 536 ~~~~~--~~~~~~~p~--------------------------~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
..... .....+.+. .....++.+.+|+.+||++||.+|||++|+|+||||..
T Consensus 208 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 287 (324)
T 3mtl_A 208 EQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS 287 (324)
T ss_dssp HHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred HHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhh
Confidence 22221 111111111 11235678899999999999999999999999999987
Q ss_pred hhcc
Q 001366 588 FQEV 591 (1092)
Q Consensus 588 ~~~~ 591 (1092)
..+.
T Consensus 288 ~~~~ 291 (324)
T 3mtl_A 288 LGER 291 (324)
T ss_dssp GCST
T ss_pred cccc
Confidence 6543
No 118
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.98 E-value=7.4e-33 Score=309.12 Aligned_cols=242 Identities=15% Similarity=0.171 Sum_probs=177.5
Q ss_pred cccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
++.|.||++...+ ++.++.|+....... .......++..++...+|||++.+++........+
T Consensus 13 G~~g~V~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~----------- 76 (288)
T 1ob3_A 13 GTYGVVYKAQNNY-----GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLV----------- 76 (288)
T ss_dssp ETTEEEEEEEETT-----SCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEE-----------
T ss_pred CCCEEEEEEEcCC-----CCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEE-----------
Confidence 4789999997632 445555544222211 12234456777888889999999877655433322
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+|||++| +|.+++......++..+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+++..
T Consensus 77 -----lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 150 (288)
T 1ob3_A 77 -----LVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF 150 (288)
T ss_dssp -----EEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHH
T ss_pred -----EEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECcccccc
Confidence 37999987 999999877667888899999999999999999999999999999999999999999999998764
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
..+.
T Consensus 151 ~~~~---------------------------------------------------------------------------- 154 (288)
T 1ob3_A 151 GIPV---------------------------------------------------------------------------- 154 (288)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred Cccc----------------------------------------------------------------------------
Confidence 3100
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
...+...||++|+|||++.+ ..++.++|||||||+||||+++ |......
T Consensus 155 ---------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~ 207 (288)
T 1ob3_A 155 ---------------------------RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA 207 (288)
T ss_dssp ----------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ---------------------------cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 00114568999999999987 4589999999999999999985 5443333
Q ss_pred HHHHHhccc--cC-------------CCC------------CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 536 AAAMSDLRD--RI-------------LPP------------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 536 ~~~~~~~~~--~~-------------~p~------------~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
.......+. .. ..+ .....++.+.+|+.+||++||.+|||+.|+|+||||.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 286 (288)
T 1ob3_A 208 DQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (288)
T ss_dssp HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred HHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence 322222110 00 000 11235678889999999999999999999999999975
No 119
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.98 E-value=1.1e-29 Score=283.90 Aligned_cols=275 Identities=15% Similarity=0.228 Sum_probs=229.8
Q ss_pred ccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCccccc
Q 001366 741 IQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYY 820 (1092)
Q Consensus 741 ~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~ 820 (1092)
.|+++..|.+..|+++++|+..+.++...+. +.+|...|++++|+|++++||+|+.|++|+||++.+. ..
T Consensus 32 ~WS~~~~lAvg~D~tV~iWd~~tg~~~~~~~---~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~-------~~ 101 (318)
T 4ggc_A 32 DWSSGNVLAVALDNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ-------KR 101 (318)
T ss_dssp EECTTSEEEEEETTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT-------EE
T ss_pred EECCCCEEEEEeCCEEEEEECCCCCEEEEEE---ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc-------ee
Confidence 4778888888899999999998877766554 5589999999999999999999999999999998752 22
Q ss_pred ceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCC-ceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEE
Q 001366 821 PAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG-QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLW 899 (1092)
Q Consensus 821 ~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg-~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iW 899 (1092)
.....+|...+.++.+.+ ..+++++.++.+++|+..++ ..+..+.+|...+..+.|.+ ++..|++++.|++|++|
T Consensus 102 ~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iw 177 (318)
T 4ggc_A 102 LRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVW 177 (318)
T ss_dssp EEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEE
T ss_pred EEEecCccceEEEeecCC---CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcC-CCCEEEEEecCcceeEE
Confidence 334567888888877764 59999999999999998876 46778889999999999999 88999999999999999
Q ss_pred ecCCCceeee-----EecCCceEEEEEccCCCeEE--EEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEE
Q 001366 900 NINEKNSLAT-----IKNIANVCCVQFSAHSSHLL--AFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTL 971 (1092)
Q Consensus 900 Dl~~~~~l~~-----l~~~~~V~sl~fsp~~~~~l--atgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L 971 (1092)
|+++++.... ..+...|.++.++|++..++ ++++.++.|++||.+.... .....|...+..+.|+ ++..+
T Consensus 178 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~~ 255 (318)
T 4ggc_A 178 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC--LSAVDAHSQVCSILWSPHYKEL 255 (318)
T ss_dssp ESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE--EEEEECSSCEEEEEEETTTTEE
T ss_pred ECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc--cccccceeeeeeeeecccccce
Confidence 9998764322 12567899999999887665 4556789999999987654 3334567789999998 66666
Q ss_pred EEEE--CCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCC
Q 001366 972 VTAS--TDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPM 1039 (1092)
Q Consensus 972 ~Sgs--~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~ 1039 (1092)
++++ .|+.|+|||++ ++.++.++.+|...|++++|+|+|.+||+||.|++|+|||+....
T Consensus 256 ~~~sg~~d~~i~iwd~~--------~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 256 ISGHGFAQNQLVIWKYP--------TMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEECTTTCCEEEEETT--------TCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EEEEEcCCCEEEEEECC--------CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 6554 79999999998 467889999999999999999999999999999999999986543
No 120
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.98 E-value=8.3e-31 Score=303.19 Aligned_cols=296 Identities=15% Similarity=0.146 Sum_probs=240.6
Q ss_pred hhhhccchhhhhhccccccCCCCcEEeEcCCeEEEEEcccceEEeeE-EeeeecCCCCCEEEEEEcCC----C---CEEE
Q 001366 724 DLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGML-RTGEFNNSANVICSISFDRD----E---DHFA 795 (1092)
Q Consensus 724 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l-~~~~l~~h~~~V~sl~fspd----g---~~la 795 (1092)
.++++|...+.++.+ +|.-.++++.|+.+++|++...+..... ....+.+|...|++++|+|+ + ++|+
T Consensus 10 ~~~~~h~~~i~~~~~----~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 10 NAGKAHDADIFSVSA----CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EESSCSSSCEEEEEE----CSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhcCeEEEEe----cCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 345677777766543 5555668889999999998765410000 01235589999999999999 9 9999
Q ss_pred EEeCCCcEEEEEcCCCCCCCcccccceeeecC-----CCCeEEEEEe----cCCCCE-EEEEECCCcEEEEECCC-----
Q 001366 796 AAGVSKKIKIFEFNALFNDSVDVYYPAVEMSN-----RSKLSCVCWN----NYIKNY-LASADYDGVVKLWDACT----- 860 (1092)
Q Consensus 796 tgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h-----~~~V~~v~~s----p~~~~~-LaSgs~DgtV~IWD~~t----- 860 (1092)
+|+.|+.|++|++...... ..........| ...|.+++|+ |+ +.+ |++++.||.|++||+.+
T Consensus 86 s~~~dg~i~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~ 162 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDET--KKVIFEKLDLLDSDMKKHSFWALKWGASNDRL-LSHRLVATDVKGTTYIWKFHPFADES 162 (397)
T ss_dssp EEETTSCEEEEEEEECTTT--CCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred EEcCCCCEEEEEccCCccc--ccccceeecccccccCCCcEEEEEEeeccCCC-CceEEEEEeCCCcEEEEeCCcccccc
Confidence 9999999999998752210 00002233455 4899999999 87 788 99999999999999988
Q ss_pred -CceEE-----Eee-------ccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEec-------CCceEEEE
Q 001366 861 -GQTVS-----HYI-------EHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKN-------IANVCCVQ 920 (1092)
Q Consensus 861 -g~~i~-----~l~-------~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~-------~~~V~sl~ 920 (1092)
++.+. .+. .|...|++++|+| ++ .|++|+.|+.|++||+++++.+..+.. ...|.+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~ 240 (397)
T 1sq9_A 163 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVK 240 (397)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEE
T ss_pred ccceeeccCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEE
Confidence 66555 664 4889999999999 77 999999999999999999999988885 78899999
Q ss_pred EccCCCeEEEEEECC---CeEEEEEcCCCCcceEEecC-------------CCCCeEEEEEc-CCCEEEEEECCCeEEEE
Q 001366 921 FSAHSSHLLAFGSAD---YRTYCYDLRNARAPWCVLAG-------------HEKAVSYVKFL-DSGTLVTASTDNKLKLW 983 (1092)
Q Consensus 921 fsp~~~~~latgs~D---g~I~vwDlr~~~~~~~~l~~-------------H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vW 983 (1092)
|+|++. +|++++.| +.|++||+++.+ .+..+.+ |...|.+++|+ ++.+|++++.||.|++|
T Consensus 241 ~~~~~~-~l~~~~~d~~~g~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 318 (397)
T 1sq9_A 241 FSPQGS-LLAIAHDSNSFGCITLYETEFGE-RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW 318 (397)
T ss_dssp ECSSTT-EEEEEEEETTEEEEEEEETTTCC-EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred ECCCCC-EEEEEecCCCCceEEEEECCCCc-ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 999985 89999999 999999999875 4667777 99999999999 67799999999999999
Q ss_pred EcCCCCCCCCCCCceeEEEc------CC---------------CCCeEEEEEecCC----------CEEEEEecCCcEEE
Q 001366 984 DLKRTSHTGPSTNACSLTFS------GH---------------TNEKNFVGLSTAD----------GYIACGSESNEVYA 1032 (1092)
Q Consensus 984 Dl~~~~~~~~~~~~~~~~l~------~h---------------~~~V~~v~~spdg----------~~lasgs~Dg~I~I 1032 (1092)
|++ ...++..+. +| ...|++++|+|++ .+|++|+.|+.|++
T Consensus 319 d~~--------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~i 390 (397)
T 1sq9_A 319 DVK--------TKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRW 390 (397)
T ss_dssp ETT--------TTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEE
T ss_pred EcC--------CCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEE
Confidence 998 456778888 77 9999999999998 79999999999999
Q ss_pred EeCCCC
Q 001366 1033 YHRSLP 1038 (1092)
Q Consensus 1033 wd~~~~ 1038 (1092)
|++.++
T Consensus 391 w~~~~g 396 (397)
T 1sq9_A 391 FREAGG 396 (397)
T ss_dssp EEEEC-
T ss_pred EEcCCC
Confidence 998654
No 121
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.98 E-value=1e-29 Score=300.60 Aligned_cols=274 Identities=18% Similarity=0.365 Sum_probs=236.2
Q ss_pred ecCCCCCE-EEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcE
Q 001366 775 FNNSANVI-CSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVV 853 (1092)
Q Consensus 775 l~~h~~~V-~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV 853 (1092)
+.+|...| +++ +++|++|++|+.|++|+|||+.+. .......+|...|.+++|++ ++|++|+.||+|
T Consensus 114 l~~h~~~v~~~~--~~~g~~l~sg~~dg~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~---~~l~s~~~dg~i 181 (445)
T 2ovr_B 114 LKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTG-------KCLRTLVGHTGGVWSSQMRD---NIIISGSTDRTL 181 (445)
T ss_dssp EECSTTSCEEEE--EEETTEEEEEETTSCEEEEETTTC-------CEEEECCCCSSCEEEEEEET---TEEEEEETTSCE
T ss_pred ecccCCCcEEEE--EEcCCEEEEEECCCcEEEEECCCC-------cEEEEEcCCCCCEEEEEecC---CEEEEEeCCCeE
Confidence 44777764 554 456899999999999999998752 12233457999999999984 599999999999
Q ss_pred EEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEE
Q 001366 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFG 932 (1092)
Q Consensus 854 ~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latg 932 (1092)
++||+.+++.+..+.+|...|.++.|++ ..+++|+.|++|++||+++++++..+. +...|.+++| ++ .++++|
T Consensus 182 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~ 255 (445)
T 2ovr_B 182 KVWNAETGECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DG-RRVVSG 255 (445)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CS-SCEEEE
T ss_pred EEEECCcCcEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CC-CEEEEE
Confidence 9999999999999999999999999964 689999999999999999999998887 6788999999 44 479999
Q ss_pred ECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEE
Q 001366 933 SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFV 1012 (1092)
Q Consensus 933 s~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v 1012 (1092)
+.||.|++||+++.+ .+..+.+|...|.++.| ++.++++++.|+.|++||++ .+.++..+.+|...+.++
T Consensus 256 ~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~--------~~~~~~~~~~~~~~v~~~ 325 (445)
T 2ovr_B 256 AYDFMVKVWDPETET-CLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVE--------TGNCIHTLTGHQSLTSGM 325 (445)
T ss_dssp ETTSCEEEEEGGGTE-EEEEECCCSSCEEEEEE-CSSEEEEEETTSCEEEEETT--------TCCEEEEECCCCSCEEEE
T ss_pred cCCCEEEEEECCCCc-EeEEecCCCCceEEEEE-CCCEEEEEeCCCeEEEEECC--------CCCEEEEEcCCcccEEEE
Confidence 999999999999865 46778899999999999 78899999999999999998 456788899999998887
Q ss_pred EEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1013 GLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1013 ~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.++ +.+|++|+.||.|++||+.+++.+..+.. ...|...|.+++|+ +.+|++|+.||.|+||++
T Consensus 326 ~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-----------~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 326 ELK--DNILVSGNADSTVKIWDIKTGQCLQTLQG-----------PNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL 389 (445)
T ss_dssp EEE--TTEEEEEETTSCEEEEETTTCCEEEEECS-----------TTSCSSCEEEEEEC--SSEEEEEETTSEEEEEET
T ss_pred EEe--CCEEEEEeCCCeEEEEECCCCcEEEEEcc-----------CCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEEC
Confidence 774 66999999999999999998888776641 13477889999996 579999999999999996
No 122
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.98 E-value=2.1e-33 Score=327.72 Aligned_cols=254 Identities=18% Similarity=0.162 Sum_probs=183.3
Q ss_pred CchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhcc-CCCCCCCccccceecC
Q 001366 210 GFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVAS-NASPKPVGVGTAVVSN 284 (1092)
Q Consensus 210 ~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 284 (1092)
+...|.+.+.++ |.|.||++...+ .+..++.|+....... .......++..++.. .+||||+.++.....+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~----~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~ 125 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKK----TDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE 125 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETT----TTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECC----CCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEEC
Confidence 455666666665 789999997632 2455566554322111 111222333334433 4899999987765544
Q ss_pred CCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc
Q 001366 285 GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~ 364 (1092)
...+ .+||||+||+|.+++...+ .+++.+++.|+.||+.||+|||++||+||||||+||||+.
T Consensus 126 ~~~~----------------lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~ 188 (396)
T 4dc2_A 126 SRLF----------------FVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS 188 (396)
T ss_dssp SEEE----------------EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT
T ss_pred CEEE----------------EEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECC
Confidence 3333 3899999999999997764 5778899999999999999999999999999999999999
Q ss_pred CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 365 ~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
++.+||+|||+++.....
T Consensus 189 ~g~ikL~DFGla~~~~~~-------------------------------------------------------------- 206 (396)
T 4dc2_A 189 EGHIKLTDYGMCKEGLRP-------------------------------------------------------------- 206 (396)
T ss_dssp TSCEEECCCTTCBCCCCT--------------------------------------------------------------
T ss_pred CCCEEEeecceeeecccC--------------------------------------------------------------
Confidence 999999999998753210
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~e 524 (1092)
.......+||++|+|||++.+..++.++|||||||+|||
T Consensus 207 -----------------------------------------~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllye 245 (396)
T 4dc2_A 207 -----------------------------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 245 (396)
T ss_dssp -----------------------------------------TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred -----------------------------------------CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHH
Confidence 000125689999999999999999999999999999999
Q ss_pred HcCC---CCcH--------HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH------HHHhhhhhhhh
Q 001366 525 LFGR---FDSE--------RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT------REILQSEVTNE 587 (1092)
Q Consensus 525 ll~~---f~~~--------~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa------~eiL~~~~~~~ 587 (1092)
|+++ |... .........+.... +......++.+.+||.+||++||.+||++ .||++||||..
T Consensus 246 ll~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~ 324 (396)
T 4dc2_A 246 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324 (396)
T ss_dssp HHHSSCSSTTTTC------CCHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred HHhCCCCCcccccccccchhhHHHHHHHHhccc-cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence 9986 4211 00111222222111 11122357899999999999999999995 79999999976
Q ss_pred h
Q 001366 588 F 588 (1092)
Q Consensus 588 ~ 588 (1092)
.
T Consensus 325 i 325 (396)
T 4dc2_A 325 V 325 (396)
T ss_dssp C
T ss_pred C
Confidence 4
No 123
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.98 E-value=3.2e-32 Score=314.71 Aligned_cols=251 Identities=19% Similarity=0.139 Sum_probs=188.7
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+.+.++ +.|+||++... ..+..++.|+....... .......++..++...+||||+.+++....+...+
T Consensus 30 ~y~~~~~lG~G~~g~V~~~~~~----~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~- 104 (362)
T 2bdw_A 30 NYDVKEELGKGAFSVVRRCVHK----TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY- 104 (362)
T ss_dssp HEEEEEEEEEETTEEEEEEEET----TTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE-
T ss_pred CeEEeeEEecCCCeEEEEEEEC----CCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE-
Confidence 355555554 78999999752 23556666665333222 23334456777788889999999877655433333
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC---
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN--- 366 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~--- 366 (1092)
.+||||.|++|.+++...+ .+++.+++.+++||+.||+|||++||+||||||+|||++..+
T Consensus 105 ---------------lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~ 168 (362)
T 2bdw_A 105 ---------------LVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 168 (362)
T ss_dssp ---------------EEECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTC
T ss_pred ---------------EEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCC
Confidence 3899999999999997654 577889999999999999999999999999999999998654
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+||+|||+++.....
T Consensus 169 ~~kl~DfG~a~~~~~~---------------------------------------------------------------- 184 (362)
T 2bdw_A 169 AVKLADFGLAIEVNDS---------------------------------------------------------------- 184 (362)
T ss_dssp CEEECCCTTCBCCTTC----------------------------------------------------------------
T ss_pred CEEEeecCcceEecCC----------------------------------------------------------------
Confidence 5999999998664310
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
......+||++|+|||++.+..++.++|||||||+||||+
T Consensus 185 ----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll 224 (362)
T 2bdw_A 185 ----------------------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 224 (362)
T ss_dssp ----------------------------------------CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 0011457999999999999999999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccc--cCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
++ |............... ....+.+...++.+.+||.+||++||.+||++.++|+||||...
T Consensus 225 ~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 291 (362)
T 2bdw_A 225 VGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 291 (362)
T ss_dssp HSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred HCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence 86 4443333222222222 22233445668899999999999999999999999999999864
No 124
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.98 E-value=3.3e-33 Score=320.64 Aligned_cols=250 Identities=18% Similarity=0.163 Sum_probs=184.4
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhcc-CCCCCCCccccceecCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVAS-NASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 287 (1092)
.|.+.+.++ |.|.||++.... .++.++.|+...... .........+..++.. ..||+++.++.........
T Consensus 18 ~y~~~~~lG~G~fg~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 18 DFILHKMLGKGSFGKVFLAEFKK----TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp TEEEEEEEEECSSSEEEEEEETT----TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred HeEEEEEEeeCCCeEEEEEEECC----CCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 455555444 789999998632 345566665532111 1122223334444443 4899999887765544333
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~ 367 (1092)
+ .+||||+||+|.++|...+ .++..+++.++.||+.||+|||++||+||||||+|||++.++.
T Consensus 94 ~----------------lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~ 156 (345)
T 1xjd_A 94 F----------------FVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGH 156 (345)
T ss_dssp E----------------EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC
T ss_pred E----------------EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCC
Confidence 3 3899999999999998754 4778899999999999999999999999999999999999999
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+||+|||+++.....
T Consensus 157 vkL~DFG~a~~~~~~----------------------------------------------------------------- 171 (345)
T 1xjd_A 157 IKIADFGMCKENMLG----------------------------------------------------------------- 171 (345)
T ss_dssp EEECCCTTCBCCCCT-----------------------------------------------------------------
T ss_pred EEEeEChhhhhcccC-----------------------------------------------------------------
Confidence 999999998753200
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~ 527 (1092)
.......+||++|+|||++.+..++.++|||||||+||||++
T Consensus 172 --------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~ 213 (345)
T 1xjd_A 172 --------------------------------------DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI 213 (345)
T ss_dssp --------------------------------------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhc
Confidence 000125689999999999999999999999999999999998
Q ss_pred C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHH-HHhhhhhhhhh
Q 001366 528 R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR-EILQSEVTNEF 588 (1092)
Q Consensus 528 ~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~-eiL~~~~~~~~ 588 (1092)
+ |.+.................| ...++.+.+||.+||+.||.+||++. +|++||||...
T Consensus 214 g~~Pf~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~ 276 (345)
T 1xjd_A 214 GQSPFHGQDEEELFHSIRMDNPFYP--RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276 (345)
T ss_dssp SSCSSCCSSHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCCC--cccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence 5 544433333322222222222 23578899999999999999999998 99999999865
No 125
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=1.3e-32 Score=318.74 Aligned_cols=257 Identities=14% Similarity=0.192 Sum_probs=184.2
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccc-cCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTT-TMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.+ ++.|+||++... ..+..++.|+.... ..........++..++...+|||++.+++.........
T Consensus 27 y~~~~~lG~G~~g~V~~a~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~-- 100 (367)
T 1cm8_A 27 YRDLQPVGSGAYGAVCSAVDG----RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLD-- 100 (367)
T ss_dssp EEEEEEC------CEEEEEET----TTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTT--
T ss_pred EEEeEEeeecCCeEEEEEEEC----CCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccc--
Confidence 4444333 368999999752 23556666654322 22223445567788888999999998877654332211
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
. +....++|||+ |++|.++++.. .++..++..++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus 101 ---~-----~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl 169 (367)
T 1cm8_A 101 ---D-----FTDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKI 169 (367)
T ss_dssp ---T-----CCCCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEE
T ss_pred ---c-----CceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEE
Confidence 0 01112478998 89999999864 5788899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++....
T Consensus 170 ~Dfg~a~~~~~--------------------------------------------------------------------- 180 (367)
T 1cm8_A 170 LDFGLARQADS--------------------------------------------------------------------- 180 (367)
T ss_dssp CCCTTCEECCS---------------------------------------------------------------------
T ss_pred Eeeeccccccc---------------------------------------------------------------------
Confidence 99999876330
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~- 528 (1092)
..+..+||++|+|||++.+ ..++.++|||||||+||||+++
T Consensus 181 -------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 223 (367)
T 1cm8_A 181 -------------------------------------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223 (367)
T ss_dssp -------------------------------------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSS
T ss_pred -------------------------------------ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCC
Confidence 0114578999999999988 7799999999999999999985
Q ss_pred --CCcHHHHHHHHHhccc-----------------------------cCCCCCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001366 529 --FDSERALAAAMSDLRD-----------------------------RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~-----------------------------~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~ 577 (1092)
|.+.....+....+.. ..+...+...++.+.+|+.+||++||.+|||+.
T Consensus 224 ~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~ 303 (367)
T 1cm8_A 224 TLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAG 303 (367)
T ss_dssp CSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHH
Confidence 5554333332222111 011122345678899999999999999999999
Q ss_pred HHhhhhhhhhhhccch
Q 001366 578 EILQSEVTNEFQEVCA 593 (1092)
Q Consensus 578 eiL~~~~~~~~~~~~~ 593 (1092)
|+|+||||........
T Consensus 304 e~l~hp~f~~~~~~~~ 319 (367)
T 1cm8_A 304 EALAHPYFESLHDTED 319 (367)
T ss_dssp HHHHSGGGTTTC----
T ss_pred HHhcChHHHhhcCCcc
Confidence 9999999998766554
No 126
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.98 E-value=1.2e-33 Score=321.50 Aligned_cols=254 Identities=14% Similarity=0.070 Sum_probs=186.3
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+.+.++ |.|.||++... ..++.++.|++.............++..++...+||||+.++.....+...+
T Consensus 8 ~y~i~~~lG~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~-- 81 (323)
T 3tki_A 8 DWDLVQTLGEGAYGEVQLAVNR----VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY-- 81 (323)
T ss_dssp CEEEEEEEEEETTEEEEEEEET----TTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEE--
T ss_pred hceeeeEEecCCCEEEEEEEEC----CCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEE--
Confidence 455555554 78999999652 2255666666533322222233445666778889999998877654333322
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
++||||+|++|.+++...+ .++..+++.|+.||+.||+|||++||+||||||+|||++.++.+||
T Consensus 82 --------------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl 146 (323)
T 3tki_A 82 --------------LFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKI 146 (323)
T ss_dssp --------------EEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred --------------EEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEE
Confidence 3899999999999997654 4778899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++.+.....
T Consensus 147 ~Dfg~a~~~~~~~~------------------------------------------------------------------ 160 (323)
T 3tki_A 147 SDFGLATVFRYNNR------------------------------------------------------------------ 160 (323)
T ss_dssp CCCTTCEECEETTE------------------------------------------------------------------
T ss_pred EEeeccceeccCCc------------------------------------------------------------------
Confidence 99999876441000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC-CccccchhhhHHHHHHcCC-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-t~~sDIwSLGvll~ell~~- 528 (1092)
.......+||+.|+|||++.+..+ +.++|||||||+||||+++
T Consensus 161 -----------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~ 205 (323)
T 3tki_A 161 -----------------------------------ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205 (323)
T ss_dssp -----------------------------------ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSS
T ss_pred -----------------------------------ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCC
Confidence 011125679999999999988765 7899999999999999986
Q ss_pred --CCcHHHHHHHHHh-ccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 529 --FDSERALAAAMSD-LRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 529 --f~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|.........+.. .......+.+...++.+.+|+.+||++||.+|||+.|+|+||||+..
T Consensus 206 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 268 (323)
T 3tki_A 206 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268 (323)
T ss_dssp CSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred CCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence 4332221111221 22223333445668889999999999999999999999999999864
No 127
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.98 E-value=8.3e-33 Score=322.52 Aligned_cols=276 Identities=17% Similarity=0.218 Sum_probs=184.0
Q ss_pred HHHhhhc--cccceeeeCCCCCcccccccccccccccc-ccCchhhHhhhhhhhhhccCC-CCCCCccccceecCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVT-TTMPSDAALKAAGAMMVASNA-SPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 289 (1092)
|.+.+.+ ++.|+||++... ..+..++.|+... ...........++..++.... ||||+.+++.........
T Consensus 11 y~~~~~lG~G~~g~V~~~~~~----~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~- 85 (388)
T 3oz6_A 11 YELVKKLGKGAYGIVWKSIDR----RTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD- 85 (388)
T ss_dssp EEEEEC-------CEEEEEET----TTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC-
T ss_pred eEEEEEeeeCCCeEEEEEEEC----CCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE-
Confidence 4444444 478999999642 2255566654422 223334555667777787776 999998877654322111
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
. ..+||||+| +|.++++.. .++...+..++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 86 ------~-------~lv~e~~~~-~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~k 149 (388)
T 3oz6_A 86 ------V-------YLVFDYMET-DLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVK 149 (388)
T ss_dssp ------E-------EEEEECCSE-EHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEE
T ss_pred ------E-------EEEecccCc-CHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEE
Confidence 0 137999984 999999764 678889999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+++.+......... .
T Consensus 150 l~DFG~a~~~~~~~~~~~~----~-------------------------------------------------------- 169 (388)
T 3oz6_A 150 VADFGLSRSFVNIRRVTNN----I-------------------------------------------------------- 169 (388)
T ss_dssp ECCCTTCEESSSCCCCCCC----G--------------------------------------------------------
T ss_pred ecCCccccccccccccccc----c--------------------------------------------------------
Confidence 9999999875421100000 0
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~ 528 (1092)
+...+.. ..........++..+||++|+|||++.+ ..++.++|||||||+||||+++
T Consensus 170 --~~~~~~~--------------------~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g 227 (388)
T 3oz6_A 170 --PLSINEN--------------------TENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227 (388)
T ss_dssp --GGCCC-----------------------------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHS
T ss_pred --ccccccc--------------------ccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhC
Confidence 0000000 0000011223446799999999999987 6789999999999999999985
Q ss_pred ---CCcHHHHHHHHHhccccCCCC---------------------------------------------CCCCCChhHHH
Q 001366 529 ---FDSERALAAAMSDLRDRILPP---------------------------------------------SFLSENPKEAG 560 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~---------------------------------------------~~~~~~~~~~~ 560 (1092)
|.+.....+....+.....|+ .....++.+.+
T Consensus 228 ~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 307 (388)
T 3oz6_A 228 KPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALD 307 (388)
T ss_dssp SCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHH
Confidence 655544433332221111111 01145788999
Q ss_pred HHHhccccCCCCCCCHHHHhhhhhhhhhhccc
Q 001366 561 FCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1092)
Q Consensus 561 li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~~~ 592 (1092)
|+.+||..||.+|||+.|+|+||||.......
T Consensus 308 ll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~~ 339 (388)
T 3oz6_A 308 LLDKLLQFNPNKRISANDALKHPFVSIFHNPN 339 (388)
T ss_dssp HHHHHCCSSGGGSCCHHHHTTSTTTTTTCCGG
T ss_pred HHHHhhccCcccCCCHHHHhCCHHHHHhcCCc
Confidence 99999999999999999999999998765444
No 128
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.98 E-value=7.6e-33 Score=321.24 Aligned_cols=246 Identities=15% Similarity=0.126 Sum_probs=185.1
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..++.|.||++.... .+..++.|+...... .......++..++...+||||+.+++........+
T Consensus 98 G~G~~g~Vy~a~~~~----~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~---------- 162 (373)
T 2x4f_A 98 GGGRFGQVHKCEETA----TGLKLAAKIIKTRGM-KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIV---------- 162 (373)
T ss_dssp C-----CEEEEEETT----TCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE----------
T ss_pred ecCcCEEEEEEEEcC----CCcEEEEEEEccccc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE----------
Confidence 445789999997522 245566666533221 23344556777888889999998877655433322
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE--ccCCcEEEeccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL--LQSNQVKYIGPIIQ 376 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill--~~~~~vkl~Dfg~~ 376 (1092)
++|||++|++|.+++......++..+++.|+.||+.||+|||++||+||||||+|||+ +..+.+||+|||++
T Consensus 163 ------lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a 236 (373)
T 2x4f_A 163 ------LVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLA 236 (373)
T ss_dssp ------EEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSC
T ss_pred ------EEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCc
Confidence 3899999999999997766668888999999999999999999999999999999999 45678999999998
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.+...
T Consensus 237 ~~~~~~-------------------------------------------------------------------------- 242 (373)
T 2x4f_A 237 RRYKPR-------------------------------------------------------------------------- 242 (373)
T ss_dssp EECCTT--------------------------------------------------------------------------
T ss_pred eecCCc--------------------------------------------------------------------------
Confidence 764310
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
......+||++|+|||++.+..++.++|||||||+||||+++ |....
T Consensus 243 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 292 (373)
T 2x4f_A 243 ------------------------------EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN 292 (373)
T ss_dssp ------------------------------CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ------------------------------cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 001134689999999999999999999999999999999985 55444
Q ss_pred HHHHHHHhcccc--CCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 534 ALAAAMSDLRDR--ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 534 ~~~~~~~~~~~~--~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
........+... ..++.+...++.+.+||.+||++||.+|||+.|+|+||||.+.+
T Consensus 293 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~~ 350 (373)
T 2x4f_A 293 DAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHK 350 (373)
T ss_dssp HHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCHH
T ss_pred HHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCCc
Confidence 433333333322 22334556789999999999999999999999999999998753
No 129
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.3e-30 Score=296.13 Aligned_cols=254 Identities=19% Similarity=0.291 Sum_probs=216.2
Q ss_pred eeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECC--CCceEEEeeccCccEEEEEEecC-CCCEEEEEeCCCcEEEE
Q 001366 823 VEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDAC--TGQTVSHYIEHEKRAWSVDFSQV-HPTKLASGSDDCSVKLW 899 (1092)
Q Consensus 823 ~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~--tg~~i~~l~~h~~~V~sv~fsp~-~~~~laSgs~Dg~I~iW 899 (1092)
...+|...|++++|+|+ +.+|++|+.||+|+|||+. +++.+..+.+|...|++++|++. ++.+|++|+.|+.|++|
T Consensus 6 ~~~~h~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYY-GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp CEEECCCCEEEEEECSS-SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred EecCCcccEEEEEEcCC-CCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence 45679999999999998 8999999999999999998 55678889999999999999872 28999999999999999
Q ss_pred ecCCCc--eeeeEe-cCCceEEEEEccC--CCeEEEEEECCCeEEEEEcCCCCc-ceEEecCCCCCeEEEEEcC------
Q 001366 900 NINEKN--SLATIK-NIANVCCVQFSAH--SSHLLAFGSADYRTYCYDLRNARA-PWCVLAGHEKAVSYVKFLD------ 967 (1092)
Q Consensus 900 Dl~~~~--~l~~l~-~~~~V~sl~fsp~--~~~~latgs~Dg~I~vwDlr~~~~-~~~~l~~H~~~V~~v~fs~------ 967 (1092)
|+.+++ .+..+. +...|.+++|+|+ + .+|++++.|+.|++||+++... ....+.+|...|.+++|++
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----
T ss_pred EcCCCceeEeeeecCCCcceEEEEeCCCCCC-CEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccc
Confidence 999986 555555 6788999999999 6 4999999999999999998643 3456778999999999986
Q ss_pred --------CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecC---CCEEEEEecCCcEEEEeCC
Q 001366 968 --------SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTA---DGYIACGSESNEVYAYHRS 1036 (1092)
Q Consensus 968 --------~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spd---g~~lasgs~Dg~I~Iwd~~ 1036 (1092)
+.+|++++.|+.|++||++.... ...+...+.+|...|++++|+|+ +.+|++|+.|+.|++|++.
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQ----TYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ------CTTCEEEEEETTSCEEEEEEETTTT----EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred ccccCCCCCCEEEEEeCCCeEEEEEecCCCc----ceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 67899999999999999985321 23456788899999999999999 8999999999999999988
Q ss_pred CCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1037 LPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1037 ~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.+........ .....|...|++++|+|++.+|++++.||.|+||++
T Consensus 240 ~~~~~~~~~~---------~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 240 NEQGPWKKTL---------LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp STTSCCEEEE---------SSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred CCCccceeee---------eccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence 7653222111 112457788999999999999999999999999986
No 130
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.98 E-value=1.2e-32 Score=320.94 Aligned_cols=251 Identities=19% Similarity=0.171 Sum_probs=190.8
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+.+.++ +.|.||++... ..+..++.|+.... ...+.....++..++...+|||++.+++........+
T Consensus 52 ~y~i~~~LG~G~~g~Vy~~~~~----~~~~~~a~K~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~-- 124 (387)
T 1kob_A 52 YYDILEELGSGAFGVVHRCVEK----ATGRVFVAKFINTP-YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMV-- 124 (387)
T ss_dssp TEEEEEEEEEETTEEEEEEEET----TTCCEEEEEEEECC-SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEE--
T ss_pred ceEEEEEEecCCCEEEEEEEEC----CCCCEEEEEEeccc-chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEE--
Confidence 455555554 78999999763 22455566555322 1223334556777888889999999877655433333
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc--CCcE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ--SNQV 368 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~--~~~v 368 (1092)
++|||+.|++|.+++...+..+++.+++.++.||+.||+|||++||+||||||+|||++. .+.+
T Consensus 125 --------------lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~v 190 (387)
T 1kob_A 125 --------------LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSV 190 (387)
T ss_dssp --------------EEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCE
T ss_pred --------------EEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCce
Confidence 389999999999999877667899999999999999999999999999999999999974 4779
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++.....
T Consensus 191 kL~DFG~a~~~~~~------------------------------------------------------------------ 204 (387)
T 1kob_A 191 KIIDFGLATKLNPD------------------------------------------------------------------ 204 (387)
T ss_dssp EECCCTTCEECCTT------------------------------------------------------------------
T ss_pred EEEecccceecCCC------------------------------------------------------------------
Confidence 99999998764310
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~ 528 (1092)
.......||+.|+|||++.+..++.++|||||||+||||+++
T Consensus 205 --------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg 246 (387)
T 1kob_A 205 --------------------------------------EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246 (387)
T ss_dssp --------------------------------------SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHS
T ss_pred --------------------------------------cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhC
Confidence 001134689999999999999999999999999999999986
Q ss_pred ---CCcHHHHHHHHHhccc--cCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 529 ---FDSERALAAAMSDLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|.+............. ...++.+...++.+.+||.+||++||.+|||+.|+|+||||...
T Consensus 247 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 311 (387)
T 1kob_A 247 LSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD 311 (387)
T ss_dssp CCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred CCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCC
Confidence 5444333332222222 22234455678999999999999999999999999999999864
No 131
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.98 E-value=6e-33 Score=311.30 Aligned_cols=252 Identities=14% Similarity=0.122 Sum_probs=180.7
Q ss_pred hhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCch-------------------------hhHhhhhhhh
Q 001366 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-------------------------DAALKAAGAM 264 (1092)
Q Consensus 212 ~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~ 264 (1092)
.+|.+.+.++ |.|.||++.... .+..++.|+........ ......++..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 88 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNEN----DNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIA 88 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETT----TTEEEEEEEEECC-------------------------------CHHHHHHH
T ss_pred cceEEEeEEeecCCEEEEEEEECC----CCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHH
Confidence 3455555554 789999996421 24555665553222110 1123455677
Q ss_pred hhccCCCCCCCccccceecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Q 001366 265 MVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDY 344 (1092)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~ 344 (1092)
++...+|||++.+++....... ... ..+|||++|++|.+++.. ..++..+++.++.||+.||+|
T Consensus 89 ~l~~l~h~~iv~~~~~~~~~~~-------~~~-------~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~ 152 (298)
T 2zv2_A 89 ILKKLDHPNVVKLVEVLDDPNE-------DHL-------YMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEY 152 (298)
T ss_dssp HHHTCCCTTBCCEEEEEECSSS-------SEE-------EEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCeEEEEEEcCCC-------CEE-------EEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHH
Confidence 7888899999987766442110 001 138999999999987643 357888999999999999999
Q ss_pred hhhcCccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccc
Q 001366 345 HHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFS 424 (1092)
Q Consensus 345 lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (1092)
||++||+||||||+|||++.++.+||+|||+++......
T Consensus 153 lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------------------------------- 191 (298)
T 2zv2_A 153 LHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD----------------------------------------- 191 (298)
T ss_dssp HHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSS-----------------------------------------
T ss_pred HHHCCeeccCCCHHHEEECCCCCEEEecCCCcccccccc-----------------------------------------
Confidence 999999999999999999999999999999987643100
Q ss_pred cccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccc
Q 001366 425 RWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL 504 (1092)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 504 (1092)
.......||+.|+|||++
T Consensus 192 --------------------------------------------------------------~~~~~~~gt~~y~aPE~~ 209 (298)
T 2zv2_A 192 --------------------------------------------------------------ALLSNTVGTPAFMAPESL 209 (298)
T ss_dssp --------------------------------------------------------------CEECCCCSCGGGCCGGGC
T ss_pred --------------------------------------------------------------ccccCCcCCccccChhhh
Confidence 001145789999999999
Q ss_pred cCCC---CCccccchhhhHHHHHHcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001366 505 SGGV---CTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1092)
Q Consensus 505 ~~~~---~t~~sDIwSLGvll~ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~e 578 (1092)
.+.. ++.++|||||||+||||+++ |...................+.....++.+.+|+.+||++||.+|||+.|
T Consensus 210 ~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e 289 (298)
T 2zv2_A 210 SETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPE 289 (298)
T ss_dssp CTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred ccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHH
Confidence 8755 47899999999999999985 44433322222222222223444566889999999999999999999999
Q ss_pred Hhhhhhhh
Q 001366 579 ILQSEVTN 586 (1092)
Q Consensus 579 iL~~~~~~ 586 (1092)
+|+||||.
T Consensus 290 ~l~hp~~~ 297 (298)
T 2zv2_A 290 IKLHPWVT 297 (298)
T ss_dssp HTTCHHHH
T ss_pred HhcCcccc
Confidence 99999995
No 132
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.98 E-value=6.4e-33 Score=314.79 Aligned_cols=248 Identities=15% Similarity=0.125 Sum_probs=186.3
Q ss_pred hhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 212 ~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
..|.+.+.++ +.|.||++... ..+..++.|+...... ........++..++...+||||+.++.........
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~ 81 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSR----HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQI 81 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEEC----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEE
Confidence 3455555444 68999998763 2245566665422111 11122334556667788999999987765543333
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~ 367 (1092)
+ .+|||++|++|.++|...+ .++...++.++.||+.||+|||++||+||||||+|||++.+|.
T Consensus 82 ~----------------lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~ 144 (318)
T 1fot_A 82 F----------------MIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGH 144 (318)
T ss_dssp E----------------EEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSC
T ss_pred E----------------EEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCC
Confidence 3 3899999999999998754 4777799999999999999999999999999999999999999
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+||+|||+++...+.
T Consensus 145 ~kL~Dfg~a~~~~~~----------------------------------------------------------------- 159 (318)
T 1fot_A 145 IKITDFGFAKYVPDV----------------------------------------------------------------- 159 (318)
T ss_dssp EEECCCSSCEECSSC-----------------------------------------------------------------
T ss_pred EEEeecCcceecCCc-----------------------------------------------------------------
Confidence 999999998763310
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~ 527 (1092)
....+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 160 -----------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~ 198 (318)
T 1fot_A 160 -----------------------------------------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA 198 (318)
T ss_dssp -----------------------------------------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHh
Confidence 014578999999999999999999999999999999998
Q ss_pred C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 528 R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 528 ~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
+ |............+......| ...++.+.+||.+||..||.+|| ++.+|++||||...
T Consensus 199 g~~pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~ 265 (318)
T 1fot_A 199 GYTPFYDSNTMKTYEKILNAELRFP--PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265 (318)
T ss_dssp SSCTTCCSSHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCCC--CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence 6 544443333333333322212 23478899999999999999999 89999999999864
No 133
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.98 E-value=2.5e-32 Score=307.75 Aligned_cols=255 Identities=16% Similarity=0.145 Sum_probs=177.6
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCc-------hhhHhhhhhhhhhccCCCCCCCccccceecC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-------SDAALKAAGAMMVASNASPKPVGVGTAVVSN 284 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (1092)
|.+.+.+ +|.|.||++... ..+..++.|+....... ..........+.+....|||++.+++.....
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 11 YEPVAEIGVGAYGTVYKARDP----HSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp CEEEEEECCSSSCCEEEEECT----TTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred eEEEEEEecCCCeEEEEEEEC----CCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 5554444 478999999852 23556666665322111 1112222222333444699999887765433
Q ss_pred CCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc
Q 001366 285 GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL 363 (1092)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~-~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~ 363 (1092)
.... ... ...+|||+.| +|.+++..... .++..+++.|++||+.||+|||++||+||||||+|||++
T Consensus 87 ~~~~----~~~-------~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~ 154 (308)
T 3g33_A 87 RTDR----EIK-------VTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT 154 (308)
T ss_dssp CSSS----EEE-------EEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEEC
T ss_pred CCCC----cee-------EEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc
Confidence 2211 000 1137888875 99999976543 488889999999999999999999999999999999999
Q ss_pred cCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCc
Q 001366 364 QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANE 443 (1092)
Q Consensus 364 ~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1092)
.++.+||+|||+++.....
T Consensus 155 ~~~~~kl~Dfg~a~~~~~~------------------------------------------------------------- 173 (308)
T 3g33_A 155 SGGTVKLADFGLARIYSYQ------------------------------------------------------------- 173 (308)
T ss_dssp TTSCEEECSCSCTTTSTTC-------------------------------------------------------------
T ss_pred CCCCEEEeeCccccccCCC-------------------------------------------------------------
Confidence 9999999999988653310
Q ss_pred cccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHH
Q 001366 444 SDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFF 523 (1092)
Q Consensus 444 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ 523 (1092)
...+..+||++|+|||++.+..++.++|||||||+||
T Consensus 174 -------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 210 (308)
T 3g33_A 174 -------------------------------------------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFA 210 (308)
T ss_dssp -------------------------------------------CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCccccccccCchHHcCCCCCchHHHHHHHHHHH
Confidence 0012457899999999999999999999999999999
Q ss_pred HHcCC---CCcHHHHHHHHHhccccCCCC-------------------------CCCCCChhHHHHHHhccccCCCCCCC
Q 001366 524 ELFGR---FDSERALAAAMSDLRDRILPP-------------------------SFLSENPKEAGFCLWQLHPEPLSRPT 575 (1092)
Q Consensus 524 ell~~---f~~~~~~~~~~~~~~~~~~p~-------------------------~~~~~~~~~~~li~~lL~~dP~~Rps 575 (1092)
||+++ |.+................++ .....++.+.+|+.+||++||.+|||
T Consensus 211 ~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 290 (308)
T 3g33_A 211 EMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRIS 290 (308)
T ss_dssp HTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCC
Confidence 99986 544333333222221110000 11345678899999999999999999
Q ss_pred HHHHhhhhhhhhh
Q 001366 576 TREILQSEVTNEF 588 (1092)
Q Consensus 576 a~eiL~~~~~~~~ 588 (1092)
+.|+|+||||...
T Consensus 291 ~~e~l~h~~~~~~ 303 (308)
T 3g33_A 291 AFRALQHSYLHKD 303 (308)
T ss_dssp HHHHHTSTTC---
T ss_pred HHHHhcCccccCC
Confidence 9999999999864
No 134
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.98 E-value=6.8e-33 Score=318.17 Aligned_cols=253 Identities=18% Similarity=0.160 Sum_probs=183.9
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccC-CCCCCCccccceecCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASN-ASPKPVGVGTAVVSNG 285 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 285 (1092)
...|.+.+.++ +.|.||++.... .+..++.|+....... .......++..++... +|||++.++.....+.
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~ 83 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKK----TDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES 83 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT----TTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred hhheEEEEEEEecCCeEEEEEEECC----CCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC
Confidence 44566555554 689999997632 3455666665332221 1222333445555544 8999999877765443
Q ss_pred CCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC
Q 001366 286 SLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS 365 (1092)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~ 365 (1092)
..+ .+|||++|++|.+++...+ .+++.+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 84 ~~~----------------lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~ 146 (345)
T 3a8x_A 84 RLF----------------FVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 146 (345)
T ss_dssp EEE----------------EEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT
T ss_pred EEE----------------EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCC
Confidence 333 3899999999999997754 47788999999999999999999999999999999999999
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+.+||+|||+++......
T Consensus 147 g~~kL~DFG~a~~~~~~~-------------------------------------------------------------- 164 (345)
T 3a8x_A 147 GHIKLTDYGMCKEGLRPG-------------------------------------------------------------- 164 (345)
T ss_dssp SCEEECCGGGCBCSCCTT--------------------------------------------------------------
T ss_pred CCEEEEeccccccccCCC--------------------------------------------------------------
Confidence 999999999987532100
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL 525 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~el 525 (1092)
......+||++|+|||++.+..++.++|||||||+||||
T Consensus 165 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 203 (345)
T 3a8x_A 165 -----------------------------------------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 203 (345)
T ss_dssp -----------------------------------------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred -----------------------------------------CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHH
Confidence 001256899999999999999999999999999999999
Q ss_pred cCC---CCcH--------HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH------HHHhhhhhhhhh
Q 001366 526 FGR---FDSE--------RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT------REILQSEVTNEF 588 (1092)
Q Consensus 526 l~~---f~~~--------~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa------~eiL~~~~~~~~ 588 (1092)
+++ |... .........+..... ......++.+.+||.+||++||.+||++ .||++||||...
T Consensus 204 l~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 282 (345)
T 3a8x_A 204 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282 (345)
T ss_dssp HHSSCTTTTTTC-------CHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred HhCCCCcCCcccccccccccHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence 986 4220 111111222211111 1112457889999999999999999996 899999999764
No 135
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.98 E-value=1.6e-30 Score=295.28 Aligned_cols=298 Identities=15% Similarity=0.200 Sum_probs=234.9
Q ss_pred hhhccchhhhhhccccccCCCC-cEE--eEc---CCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCC---CCEEE
Q 001366 725 LLRDRENLFLAQQDQEIQNPTD-RLG--AFF---DGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRD---EDHFA 795 (1092)
Q Consensus 725 ~l~~~~~~~~~~~~~~~~~~~~-~l~--~~~---D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspd---g~~la 795 (1092)
++.+|.+.+..+. ++|++ .+. ++. |+.+++|++...+...... .+|...|.+++|+|+ +.+|+
T Consensus 13 ~~~~h~~~v~~~~----~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~l~ 84 (357)
T 3i2n_A 13 IQKGFNYTVFDCK----WVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLRE----IEKAKPIKCGTFGATSLQQRYLA 84 (357)
T ss_dssp EEEECSSCEEEEE----ECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEE----EEESSCEEEEECTTCCTTTCCEE
T ss_pred hccCCCCceEEEE----EcCCCceEEEecCccCCCcEEEEEeCCCCcccceee----ecccCcEEEEEEcCCCCCCceEE
Confidence 3455666666554 45644 343 333 8999999988765443322 268899999999998 69999
Q ss_pred EEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEE------ecCCCCEEEEEECCCcEEEEECCCCc-eEEEee
Q 001366 796 AAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCW------NNYIKNYLASADYDGVVKLWDACTGQ-TVSHYI 868 (1092)
Q Consensus 796 tgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~------sp~~~~~LaSgs~DgtV~IWD~~tg~-~i~~l~ 868 (1092)
+|+.|+.|++||+.... .......+|...|.+++| +|+ +.+|++++.||+|++||+.+++ .+..+.
T Consensus 85 ~~~~dg~i~iwd~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~s~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~ 157 (357)
T 3i2n_A 85 TGDFGGNLHIWNLEAPE------MPVYSVKGHKEIINAIDGIGGLGIGEG-APEIVTGSRDGTVKVWDPRQKDDPVANME 157 (357)
T ss_dssp EEETTSCEEEECTTSCS------SCSEEECCCSSCEEEEEEESGGGCC-C-CCEEEEEETTSCEEEECTTSCSSCSEEEC
T ss_pred EecCCCeEEEEeCCCCC------ccEEEEEecccceEEEeeccccccCCC-ccEEEEEeCCCeEEEEeCCCCCCcceecc
Confidence 99999999999987521 122344578999999976 455 8899999999999999999887 677776
Q ss_pred ccCc----cEEEEE----EecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEcc---CCCeEEEEEECCCe
Q 001366 869 EHEK----RAWSVD----FSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSA---HSSHLLAFGSADYR 937 (1092)
Q Consensus 869 ~h~~----~V~sv~----fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp---~~~~~latgs~Dg~ 937 (1092)
.|.. .|++++ |+| ++.+|++|+.|+.|++||+++++......+...|.+++|+| ++. +|++|+.||.
T Consensus 158 ~~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~dg~ 235 (357)
T 3i2n_A 158 PVQGENKRDCWTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMN-KLVATSLEGK 235 (357)
T ss_dssp CCTTSCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCC-EEEEEESTTE
T ss_pred ccCCCCCCceEEEEEEeccCC-CCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCC-EEEEECCCCe
Confidence 6554 799998 567 88999999999999999999999887777889999999999 774 8999999999
Q ss_pred EEEEEcCCCCcce----EEecCCCCCeEEEEEcC-CC-EEEEEECCCeEEEEEcCCCCCCCC-----------CCCceeE
Q 001366 938 TYCYDLRNARAPW----CVLAGHEKAVSYVKFLD-SG-TLVTASTDNKLKLWDLKRTSHTGP-----------STNACSL 1000 (1092)
Q Consensus 938 I~vwDlr~~~~~~----~~l~~H~~~V~~v~fs~-~~-~L~Sgs~Dg~I~vWDl~~~~~~~~-----------~~~~~~~ 1000 (1092)
|++||+++.+... ..+.+|...|.+++|++ +. +|++++.||.|++||++....... ....++.
T Consensus 236 i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~ 315 (357)
T 3i2n_A 236 FHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQ 315 (357)
T ss_dssp EEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEE
T ss_pred EEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceee
Confidence 9999998764321 12348999999999995 44 699999999999999985432110 0114678
Q ss_pred EEcCCCCCeEEEEEecCCCEEE-EEecCCcEEEEeCCCCC
Q 001366 1001 TFSGHTNEKNFVGLSTADGYIA-CGSESNEVYAYHRSLPM 1039 (1092)
Q Consensus 1001 ~l~~h~~~V~~v~~spdg~~la-sgs~Dg~I~Iwd~~~~~ 1039 (1092)
.+.+|...|++++|+|++.+|+ +|+.|+.|+||++....
T Consensus 316 ~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 316 NVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred ccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 8899999999999999999888 89999999999987654
No 136
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.98 E-value=5.9e-33 Score=328.11 Aligned_cols=253 Identities=14% Similarity=0.102 Sum_probs=188.8
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
|.+.+.+ +|.|.||++...+ .+..++.|+...... ........++..++....||||+.++.....+...+
T Consensus 76 y~~~~~LG~G~fG~V~~~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~- 150 (437)
T 4aw2_A 76 FEILKVIGRGAFGEVAVVKLKN----ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLY- 150 (437)
T ss_dssp EEEEEEEEECSSEEEEEEEETT----TTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE-
T ss_pred eEEEEEEEeCCCEEEEEEEEcC----CCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEE-
Confidence 4444444 4789999998633 245556665422111 111111334455667789999998877655444333
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
.+||||+||+|.++|......+++..++.|+.||+.||+|||++||+||||||+||||+.++.+|
T Consensus 151 ---------------lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vk 215 (437)
T 4aw2_A 151 ---------------LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIR 215 (437)
T ss_dssp ---------------EEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEE
T ss_pred ---------------EEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEE
Confidence 38999999999999987656788889999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+++......
T Consensus 216 L~DFGla~~~~~~~------------------------------------------------------------------ 229 (437)
T 4aw2_A 216 LADFGSCLKLMEDG------------------------------------------------------------------ 229 (437)
T ss_dssp ECCCTTCEECCTTS------------------------------------------------------------------
T ss_pred EcchhhhhhcccCC------------------------------------------------------------------
Confidence 99999987644100
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc-----CCCCCccccchhhhHHHHH
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS-----GGVCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-----~~~~t~~sDIwSLGvll~e 524 (1092)
....+..+||++|+|||++. ...|+.++|||||||+|||
T Consensus 230 ------------------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~e 273 (437)
T 4aw2_A 230 ------------------------------------TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYE 273 (437)
T ss_dssp ------------------------------------CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHH
T ss_pred ------------------------------------CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHH
Confidence 00011468999999999997 4678999999999999999
Q ss_pred HcCC---CCcHHHHHHHHHhcc---ccCCCCCCCCCChhHHHHHHhccccCCCC--CCCHHHHhhhhhhhhh
Q 001366 525 LFGR---FDSERALAAAMSDLR---DRILPPSFLSENPKEAGFCLWQLHPEPLS--RPTTREILQSEVTNEF 588 (1092)
Q Consensus 525 ll~~---f~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~li~~lL~~dP~~--Rpsa~eiL~~~~~~~~ 588 (1092)
|++| |.+..........+. ...+|+.....++.+.+||.+||+.+|.+ ||++.||++||||...
T Consensus 274 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i 345 (437)
T 4aw2_A 274 MLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI 345 (437)
T ss_dssp HHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred HHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence 9985 554443333333322 23455555667899999999999988888 9999999999999865
No 137
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.97 E-value=1.1e-32 Score=313.80 Aligned_cols=250 Identities=15% Similarity=0.129 Sum_probs=184.8
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCc-----hhhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-----SDAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
|.+.+.+ ++.|.||++... ..+..++.|+....... .......++..++...+|||++.+++.......
T Consensus 13 y~~~~~lG~G~~g~V~~~~~~----~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 13 YDTGEELGSGQFAVVKKCREK----STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEET----TTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred eEeceEEeeCCCeEEEEEEEC----CCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 4444444 368999999763 22455666554322211 122334466777888899999988776543332
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
.+ .+||||+|++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+|||++..+
T Consensus 89 ~~----------------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~ 151 (326)
T 2y0a_A 89 VI----------------LILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN 151 (326)
T ss_dssp EE----------------EEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSS
T ss_pred EE----------------EEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCC
Confidence 22 3899999999999997654 577889999999999999999999999999999999999887
Q ss_pred ----cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccC
Q 001366 367 ----QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETAN 442 (1092)
Q Consensus 367 ----~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1092)
.+||+|||+++.....
T Consensus 152 ~~~~~~kl~Dfg~a~~~~~~------------------------------------------------------------ 171 (326)
T 2y0a_A 152 VPKPRIKIIDFGLAHKIDFG------------------------------------------------------------ 171 (326)
T ss_dssp SSSCCEEECCCTTCEECCTT------------------------------------------------------------
T ss_pred CCCCCEEEEECCCCeECCCC------------------------------------------------------------
Confidence 8999999998764310
Q ss_pred ccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHH
Q 001366 443 ESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLF 522 (1092)
Q Consensus 443 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll 522 (1092)
......+||+.|+|||++.+..++.++|||||||+|
T Consensus 172 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 207 (326)
T 2y0a_A 172 --------------------------------------------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207 (326)
T ss_dssp --------------------------------------------SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred --------------------------------------------CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHH
Confidence 001145689999999999999999999999999999
Q ss_pred HHHcCC---CCcHHHHHHHHHh--ccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 523 FELFGR---FDSERALAAAMSD--LRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 523 ~ell~~---f~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|||+++ |.+.......... ......++.+...++.+.+|+.+||++||.+|||+.|+|+||||...
T Consensus 208 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 208 YILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278 (326)
T ss_dssp HHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred HHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence 999985 4433332222222 22111122234567889999999999999999999999999999754
No 138
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-29 Score=282.57 Aligned_cols=291 Identities=15% Similarity=0.202 Sum_probs=241.1
Q ss_pred chhhhccchhhhhhccccccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCc
Q 001366 723 NDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKK 802 (1092)
Q Consensus 723 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~ 802 (1092)
...+.+|.+.+..+.+ .+..-.++++.|+.+++|+......... +..|...|.+++|+|++++|++|+.|+.
T Consensus 11 ~~~l~~h~~~v~~~~~---~~~~~l~s~~~dg~v~vw~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 82 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA---VDDSKVASVSRDGTVRLWSKDDQWLGTV-----VYTGQGFLNSVCYDSEKELLLFGGKDTM 82 (313)
T ss_dssp EEEECCCSSCEEEEEE---EETTEEEEEETTSEEEEEEESSSEEEEE-----EEECSSCEEEEEEETTTTEEEEEETTSC
T ss_pred HHHhhCCCCCcEEEEe---cCCCEEEEEEcCCcEEEEECCCCEEEEE-----eecCCccEEEEEECCCCCEEEEecCCCe
Confidence 3456778777766654 1223356788999999999877655443 4468999999999999999999999999
Q ss_pred EEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecC
Q 001366 803 IKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQV 882 (1092)
Q Consensus 803 I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~ 882 (1092)
|++|++..... .........|...|.+++|+ +++|++++.||+|++|| .++.+..+..|...+.++.|.|.
T Consensus 83 i~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~ 153 (313)
T 3odt_A 83 INGVPLFATSG----EDPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSF 153 (313)
T ss_dssp EEEEETTCCTT----SCC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEET
T ss_pred EEEEEeeecCC----CCcccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccC
Confidence 99999875221 12223445789999999994 56999999999999999 77888899999999999999997
Q ss_pred CCCEEEEEeCCCcEEEEecCCCceeeeEe--cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCe
Q 001366 883 HPTKLASGSDDCSVKLWNINEKNSLATIK--NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAV 960 (1092)
Q Consensus 883 ~~~~laSgs~Dg~I~iWDl~~~~~l~~l~--~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V 960 (1092)
++..+++++.|+.|++||. ++.+..+. +...|.+++|+|++. +++++.|+.|++||+++.+ ++..+.+|...|
T Consensus 154 ~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~i 228 (313)
T 3odt_A 154 SENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTGD-VLRTYEGHESFV 228 (313)
T ss_dssp TTTEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTTCC-EEEEEECCSSCE
T ss_pred CCCEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCchh-hhhhhhcCCceE
Confidence 8899999999999999994 45555555 678899999999984 8899999999999999875 467788999999
Q ss_pred EEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCc
Q 001366 961 SYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMP 1040 (1092)
Q Consensus 961 ~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~ 1040 (1092)
.+++|++++.|++++.||.|++||+. .+.++..+..|...|++++|+|++. +++++.|+.|++|++..++.
T Consensus 229 ~~~~~~~~~~l~~~~~dg~v~iwd~~--------~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 229 YCIKLLPNGDIVSCGEDRTVRIWSKE--------NGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp EEEEECTTSCEEEEETTSEEEEECTT--------TCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGC
T ss_pred EEEEEecCCCEEEEecCCEEEEEECC--------CCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCce
Confidence 99999966689999999999999998 4567888999999999999999998 56789999999999987765
Q ss_pred eeee
Q 001366 1041 ITSY 1044 (1092)
Q Consensus 1041 i~~~ 1044 (1092)
+...
T Consensus 300 ~~~~ 303 (313)
T 3odt_A 300 ASED 303 (313)
T ss_dssp CC--
T ss_pred eehh
Confidence 5443
No 139
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.97 E-value=1.5e-32 Score=316.23 Aligned_cols=251 Identities=16% Similarity=0.170 Sum_probs=185.2
Q ss_pred hhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccC-CCCCCCccccceecCCC
Q 001366 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 212 ~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 286 (1092)
..|.+.+.++ |.|.||++...+ .+..++.|+...... ........++..++... .||+++.+.........
T Consensus 20 ~~y~~~~~lG~G~fg~V~~~~~~~----~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~ 95 (353)
T 2i0e_A 20 TDFNFLMVLGKGSFGKVMLSERKG----TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 95 (353)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETT----EEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECC----CCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE
Confidence 3455555554 789999998732 345566666532211 11222333444455544 89999987776554333
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
.+ .+|||++||+|.++|...+ .+++.+++.|+.||+.||+|||++||+||||||+||||+.++
T Consensus 96 ~~----------------lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g 158 (353)
T 2i0e_A 96 LY----------------FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG 158 (353)
T ss_dssp EE----------------EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred EE----------------EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCC
Confidence 33 3899999999999998765 477879999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+||+|||+++......
T Consensus 159 ~vkL~DFG~a~~~~~~~--------------------------------------------------------------- 175 (353)
T 2i0e_A 159 HIKIADFGMCKENIWDG--------------------------------------------------------------- 175 (353)
T ss_dssp CEEECCCTTCBCCCCTT---------------------------------------------------------------
T ss_pred cEEEEeCCcccccccCC---------------------------------------------------------------
Confidence 99999999987532100
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
......+||+.|+|||++.+..++.++|||||||+||||+
T Consensus 176 ----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 215 (353)
T 2i0e_A 176 ----------------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 215 (353)
T ss_dssp ----------------------------------------CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHH
Confidence 0011567999999999999999999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEF 588 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-----a~eiL~~~~~~~~ 588 (1092)
+| |.+..........+......| ...++.+.+||.+||++||.+||+ +++|++||||...
T Consensus 216 ~G~~Pf~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~ 283 (353)
T 2i0e_A 216 AGQAPFEGEDEDELFQSIMEHNVAYP--KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 283 (353)
T ss_dssp HSSCSSCCSSHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred cCCCCCCCCCHHHHHHHHHhCCCCCC--CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence 85 554443333333333322222 245788999999999999999995 6999999999764
No 140
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.97 E-value=4.8e-32 Score=311.63 Aligned_cols=241 Identities=17% Similarity=0.163 Sum_probs=171.8
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|.||++.... .+..++.|+..... ......++..++...+|||++.+++........+
T Consensus 63 ~G~~g~Vy~~~~~~----~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~----------- 124 (349)
T 2w4o_A 63 RGATSIVYRCKQKG----TQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEIS----------- 124 (349)
T ss_dssp ECSSEEEEEEEETT----TCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEE-----------
T ss_pred eCCCEEEEEEEECC----CCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEE-----------
Confidence 34789999998632 24456666553221 2233345667778889999998776654332222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc---CCcEEEeccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ---SNQVKYIGPIIQ 376 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~---~~~vkl~Dfg~~ 376 (1092)
++|||++|++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+|||++. ++.+||+|||++
T Consensus 125 -----lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a 198 (349)
T 2w4o_A 125 -----LVLELVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS 198 (349)
T ss_dssp -----EEECCCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC--
T ss_pred -----EEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccc
Confidence 3899999999999997654 4778899999999999999999999999999999999975 889999999998
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.....
T Consensus 199 ~~~~~~-------------------------------------------------------------------------- 204 (349)
T 2w4o_A 199 KIVEHQ-------------------------------------------------------------------------- 204 (349)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCcc--------------------------------------------------------------------------
Confidence 764310
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
......+||+.|+|||++.+..++.++|||||||+||||+++ |....
T Consensus 205 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 254 (349)
T 2w4o_A 205 ------------------------------VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER 254 (349)
T ss_dssp --------------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT
T ss_pred ------------------------------cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc
Confidence 001145789999999999999999999999999999999986 43332
Q ss_pred HHHHHHHhcc---ccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 534 ALAAAMSDLR---DRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 534 ~~~~~~~~~~---~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
.....+..+. ....++.+...++.+.+|+.+||.+||.+|||+.|+|+||||...
T Consensus 255 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 312 (349)
T 2w4o_A 255 GDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGK 312 (349)
T ss_dssp CHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTST
T ss_pred ccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence 2222222222 222234445678889999999999999999999999999999875
No 141
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=3.6e-30 Score=297.54 Aligned_cols=285 Identities=14% Similarity=0.169 Sum_probs=226.0
Q ss_pred hhccchhhhhhccccccCCCC---cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcC-CCCEEEEEeCCC
Q 001366 726 LRDRENLFLAQQDQEIQNPTD---RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDR-DEDHFAAAGVSK 801 (1092)
Q Consensus 726 l~~~~~~~~~~~~~~~~~~~~---~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fsp-dg~~latgg~D~ 801 (1092)
+.+|...+..+. ++|++ .++++.|+.+++|+....+....+. +.+|...|.+++|+| ++.+|++|+.|+
T Consensus 69 ~~~h~~~v~~~~----~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 69 ASPFDRRVTSLE----WHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQ---GMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp ECCCSSCEEEEE----ECSSCTTEEEEEEBTSCEEEEETTSTTCEEEEC---CCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred ccCCCCCEEEEE----ECCCCCCEEEEEcCCCeEEEEeCCCcccceeee---cCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 445555555543 34544 4577899999999988655443332 347999999999999 789999999999
Q ss_pred cEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEec
Q 001366 802 KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQ 881 (1092)
Q Consensus 802 ~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp 881 (1092)
.|+|||+.... .........+...|.+++|+|+ +.+|++|+.||+|++||+ +++.+..+.+|...|.+++|+|
T Consensus 142 ~i~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~ 214 (383)
T 3ei3_B 142 ATTLRDFSGSV-----IQVFAKTDSWDYWYCCVDVSVS-RQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNP 214 (383)
T ss_dssp EEEEEETTSCE-----EEEEECCCCSSCCEEEEEEETT-TTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECS
T ss_pred EEEEEECCCCc-----eEEEeccCCCCCCeEEEEECCC-CCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECC
Confidence 99999987411 1111111234588999999998 899999999999999999 6888999999999999999999
Q ss_pred CCCC-EEEEEeCCCcEEEEecCC----CceeeeEecCCceEEEEEcc-CCCeEEEEEECCCeEEEEEcCCCCcceEEecC
Q 001366 882 VHPT-KLASGSDDCSVKLWNINE----KNSLATIKNIANVCCVQFSA-HSSHLLAFGSADYRTYCYDLRNARAPWCVLAG 955 (1092)
Q Consensus 882 ~~~~-~laSgs~Dg~I~iWDl~~----~~~l~~l~~~~~V~sl~fsp-~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~ 955 (1092)
++. +|++|+.|++|++||+++ +.++..+.+...|.+++|+| ++. +|++++.|+.|++||+++.+.. ..+.+
T Consensus 215 -~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~l~~~~~d~~i~iwd~~~~~~~-~~~~~ 291 (383)
T 3ei3_B 215 -RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDST-KLLTTDQRNEIRVYSSYDWSKP-DQIII 291 (383)
T ss_dssp -SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSC-EEEEEESSSEEEEEETTBTTSC-SEEEE
T ss_pred -CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCC-EEEEEcCCCcEEEEECCCCccc-ccccc
Confidence 666 999999999999999998 66777888899999999999 874 8999999999999999987653 33333
Q ss_pred C-------CC----------CeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcC--CCCCeEEEEEec
Q 001366 956 H-------EK----------AVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG--HTNEKNFVGLST 1016 (1092)
Q Consensus 956 H-------~~----------~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~--h~~~V~~v~~sp 1016 (1092)
| .. .+..++|++++.+ +|+.|+.|++||+. .+.++..+.+ |...+..++|+|
T Consensus 292 ~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~--------~~~~~~~l~~~~~~~~~~~~~~s~ 362 (383)
T 3ei3_B 292 HPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDAN--------SGGLVHQLRDPNAAGIISLNKFSP 362 (383)
T ss_dssp CCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETT--------TCCEEEEECBTTBCSCCCEEEECT
T ss_pred ccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecC--------CCceeeeecCCCCCceEEEEEEec
Confidence 3 22 3444666644444 77899999999998 4566788876 567788889999
Q ss_pred CCCEEEEEecCCcEEEEeCCC
Q 001366 1017 ADGYIACGSESNEVYAYHRSL 1037 (1092)
Q Consensus 1017 dg~~lasgs~Dg~I~Iwd~~~ 1037 (1092)
++.+|++|+ |+.|+||++.+
T Consensus 363 ~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 363 TGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TSSEEEEEE-TTEEEEEECC-
T ss_pred CccEEEEec-CCcEEEEecCC
Confidence 999999997 99999999763
No 142
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.3e-32 Score=315.86 Aligned_cols=257 Identities=13% Similarity=0.117 Sum_probs=184.4
Q ss_pred hhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCc----hhhHhhhhhhhhhccCCCCCCCccccceecCC
Q 001366 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP----SDAALKAAGAMMVASNASPKPVGVGTAVVSNG 285 (1092)
Q Consensus 212 ~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (1092)
..|.+.+.++ |.|.||++.... .+..++.|+....... .......++..++...+|||++.+++......
T Consensus 10 ~~y~~~~~lg~G~~g~Vy~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 10 KRYEKLDFLGEGQFATVYKARDKN----TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp ---CEEEEEEEETTEEEEEEECSS----CCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred cccEEEeEEeecCCEEEEEEEECC----CCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 3455555554 789999998732 2455666555321111 11123446677788889999998877654333
Q ss_pred CCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC
Q 001366 286 SLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS 365 (1092)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~ 365 (1092)
..+ .+|||++| +|.+++......++..+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 86 ~~~----------------lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~ 148 (346)
T 1ua2_A 86 NIS----------------LVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN 148 (346)
T ss_dssp CCE----------------EEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred ceE----------------EEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCC
Confidence 222 37999997 8999998776678888999999999999999999999999999999999999
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+.+||+|||+++.+....
T Consensus 149 ~~~kl~Dfg~a~~~~~~~-------------------------------------------------------------- 166 (346)
T 1ua2_A 149 GVLKLADFGLAKSFGSPN-------------------------------------------------------------- 166 (346)
T ss_dssp CCEEECCCGGGSTTTSCC--------------------------------------------------------------
T ss_pred CCEEEEecccceeccCCc--------------------------------------------------------------
Confidence 999999999987643100
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~e 524 (1092)
...+..+||++|+|||++.+ ..++.++|||||||+|||
T Consensus 167 -----------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 205 (346)
T 1ua2_A 167 -----------------------------------------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAE 205 (346)
T ss_dssp -----------------------------------------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHH
Confidence 01124578999999999976 458999999999999999
Q ss_pred HcCC---CCcHHHHHHHHHhccc--cCCCC------------------------CCCCCChhHHHHHHhccccCCCCCCC
Q 001366 525 LFGR---FDSERALAAAMSDLRD--RILPP------------------------SFLSENPKEAGFCLWQLHPEPLSRPT 575 (1092)
Q Consensus 525 ll~~---f~~~~~~~~~~~~~~~--~~~p~------------------------~~~~~~~~~~~li~~lL~~dP~~Rps 575 (1092)
|+++ |.+............. ...+. .+...++.+.+|+.+||++||.+|||
T Consensus 206 ll~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 285 (346)
T 1ua2_A 206 LLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT 285 (346)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred HHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC
Confidence 9986 4444333333222211 00000 01344578899999999999999999
Q ss_pred HHHHhhhhhhhhhhccc
Q 001366 576 TREILQSEVTNEFQEVC 592 (1092)
Q Consensus 576 a~eiL~~~~~~~~~~~~ 592 (1092)
+.|+|+||||...+...
T Consensus 286 ~~ell~h~~f~~~~~~~ 302 (346)
T 1ua2_A 286 ATQALKMKYFSNRPGPT 302 (346)
T ss_dssp HHHHHTSGGGTSSSCCC
T ss_pred HHHHhcChhhhcCCCCC
Confidence 99999999998765444
No 143
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.97 E-value=1.6e-32 Score=326.25 Aligned_cols=251 Identities=18% Similarity=0.163 Sum_probs=183.1
Q ss_pred hhHHHhhhcc--ccceeeeCCCCCcccccccccccccccccc--CchhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTT--MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 212 ~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
..|.+.+.++ |.|.||++... ..+..++.|+..... .........++..++...+|||++.++.....+...
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~ 223 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEK----ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRL 223 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET----TTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEc----CCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEE
Confidence 3455555554 78999998752 235566666653221 112223345666778888999999887765544433
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhh-cCccccCCCCCCeEEccCC
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHT-QGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs-~gIvHrDLKP~Nill~~~~ 366 (1092)
+ ++|||++|++|.+++...+ .++..+++.|+.||+.||+|||+ +||+||||||+||||+.++
T Consensus 224 ~----------------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~ 286 (446)
T 4ejn_A 224 C----------------FVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG 286 (446)
T ss_dssp E----------------EEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSS
T ss_pred E----------------EEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCC
Confidence 3 3899999999999997664 57788999999999999999998 9999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+||+|||+++.....
T Consensus 287 ~~kl~DFG~a~~~~~~---------------------------------------------------------------- 302 (446)
T 4ejn_A 287 HIKITDFGLCKEGIKD---------------------------------------------------------------- 302 (446)
T ss_dssp CEEECCCCCCCTTCC-----------------------------------------------------------------
T ss_pred CEEEccCCCceeccCC----------------------------------------------------------------
Confidence 9999999998753210
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
.......+||++|+|||++.+..++.++|||||||+||||+
T Consensus 303 ---------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 343 (446)
T 4ejn_A 303 ---------------------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 343 (446)
T ss_dssp -------------------------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHh
Confidence 00112567999999999999999999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
++ |...................| ...++.+.+||.+||++||.+|| ++.|+|+||||...
T Consensus 344 ~g~~Pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~ 411 (446)
T 4ejn_A 344 CGRLPFYNQDHEKLFELILMEEIRFP--RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411 (446)
T ss_dssp HSSCSSCCSSHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCC--ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence 85 544333333222222222112 23578999999999999999999 99999999999875
No 144
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.97 E-value=1.3e-32 Score=322.24 Aligned_cols=245 Identities=18% Similarity=0.157 Sum_probs=172.7
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..++.|.||++... ..+..++.|+.... .........+.+...||||+.+++........ ...
T Consensus 71 G~G~~g~V~~~~~~----~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~-----~~~--- 133 (400)
T 1nxk_A 71 GLGINGKVLQIFNK----RTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAG-----RKC--- 133 (400)
T ss_dssp EEETTEEEEEEEET----TTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT-----EEE---
T ss_pred eeccCeEEEEEEEC----CCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccC-----CcE---
Confidence 45678999999762 23556677665211 11111122233566899999876654320000 000
Q ss_pred cccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc---CCcEEEeccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ---SNQVKYIGPI 374 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~---~~~vkl~Dfg 374 (1092)
..++||||+||+|.++|...+ ..+++.+++.|++||+.||+|||++||+||||||+||||+. ++.+||+|||
T Consensus 134 ----~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 134 ----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp ----EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred ----EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecc
Confidence 113899999999999997654 35888899999999999999999999999999999999997 7889999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++.....
T Consensus 210 ~a~~~~~~------------------------------------------------------------------------ 217 (400)
T 1nxk_A 210 FAKETTSH------------------------------------------------------------------------ 217 (400)
T ss_dssp TCEECC--------------------------------------------------------------------------
T ss_pred cccccCCC------------------------------------------------------------------------
Confidence 98763310
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCc
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDS 531 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~ 531 (1092)
...+..+||++|+|||++.+..|+.++|||||||+||||+++ |..
T Consensus 218 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 265 (400)
T 1nxk_A 218 --------------------------------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 265 (400)
T ss_dssp -----------------------------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred --------------------------------CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCC
Confidence 011256789999999999999999999999999999999986 433
Q ss_pred HHH------HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 532 ERA------LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 532 ~~~------~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
... ....+.........+.+...++.+.+||.+||+.||.+|||+.|||+||||...
T Consensus 266 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 328 (400)
T 1nxk_A 266 NHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328 (400)
T ss_dssp CTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred CccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence 211 111111111122223445678899999999999999999999999999999864
No 145
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.97 E-value=6.9e-32 Score=324.13 Aligned_cols=251 Identities=16% Similarity=0.220 Sum_probs=190.2
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
.|.+.+.++ +.|.||++... ..+..++.|+...... ........++...+...+||||+.++.....+...+
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 102 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDK----ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEET----TTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred ceEEeeEEecCCCEEEEEEEEC----CCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 355555444 78999998762 2356667766533222 223445566777888899999999877655433333
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE---ccC
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL---LQS 365 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill---~~~ 365 (1092)
++||||.|++|.+++...+ .++..+++.|++||+.||.|||++||+||||||+|||+ +.+
T Consensus 103 ----------------lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~ 165 (484)
T 3nyv_A 103 ----------------LVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKD 165 (484)
T ss_dssp ----------------EEECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTT
T ss_pred ----------------EEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCC
Confidence 3899999999999997765 47777999999999999999999999999999999999 567
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+.+||+|||+++.....
T Consensus 166 ~~~kl~Dfg~a~~~~~~--------------------------------------------------------------- 182 (484)
T 3nyv_A 166 ANIRIIDFGLSTHFEAS--------------------------------------------------------------- 182 (484)
T ss_dssp CCEEECCTTHHHHBCCC---------------------------------------------------------------
T ss_pred CcEEEEeeeeeEEcccc---------------------------------------------------------------
Confidence 89999999998764310
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL 525 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~el 525 (1092)
......+||++|+|||++.+ .++.++|||||||++|+|
T Consensus 183 -----------------------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l 220 (484)
T 3nyv_A 183 -----------------------------------------KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYIL 220 (484)
T ss_dssp -----------------------------------------CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHH
Confidence 01124579999999999976 699999999999999999
Q ss_pred cCC---CCcHHHHHHHHHhcccc--CCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 526 FGR---FDSERALAAAMSDLRDR--ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 526 l~~---f~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
+++ |.+.............. ...+.+...++.+.+|+.+||++||.+|||+.|+|+||||....
T Consensus 221 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~ 289 (484)
T 3nyv_A 221 LSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT 289 (484)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred HHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence 985 54444333332222222 22244556788999999999999999999999999999998754
No 146
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.97 E-value=4.6e-32 Score=308.06 Aligned_cols=244 Identities=18% Similarity=0.213 Sum_probs=185.3
Q ss_pred hhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 218 TTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 218 ~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
-..+|.|.||+|... ..+..++.|+..... ........++...+...+|||++.++.........+
T Consensus 53 lg~G~~g~V~~a~~~----~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~--------- 118 (321)
T 2c30_A 53 IGEGSTGIVCLAREK----HSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELW--------- 118 (321)
T ss_dssp EEEETTEEEEEEEET----TTCCEEEEEEEETTT-CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE---------
T ss_pred eccCCCeEEEEEEEC----CCCcEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEE---------
Confidence 455688999999753 125566776653322 222344556777788889999998776655433333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++|||++|++|.+++... .++..++..++.||+.||+|||++||+||||||+||+++.++.+|++|||+++
T Consensus 119 -------lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 189 (321)
T 2c30_A 119 -------VLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCA 189 (321)
T ss_dssp -------EEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred -------EEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeee
Confidence 389999999999999754 57888999999999999999999999999999999999999999999999887
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
......
T Consensus 190 ~~~~~~-------------------------------------------------------------------------- 195 (321)
T 2c30_A 190 QISKDV-------------------------------------------------------------------------- 195 (321)
T ss_dssp ECCSSS--------------------------------------------------------------------------
T ss_pred ecccCc--------------------------------------------------------------------------
Confidence 643100
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
.......||+.|+|||++.+..++.++|||||||+||||+++ |.....
T Consensus 196 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~ 246 (321)
T 2c30_A 196 -----------------------------PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP 246 (321)
T ss_dssp -----------------------------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred -----------------------------cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 001145789999999999999999999999999999999986 433322
Q ss_pred HHHHHHhccccCCC--CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 535 LAAAMSDLRDRILP--PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p--~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
. ..+..+.....+ ......++.+.+|+.+||++||.+|||+.++|+||||...
T Consensus 247 ~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 301 (321)
T 2c30_A 247 V-QAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT 301 (321)
T ss_dssp H-HHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred H-HHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence 2 222233322222 1223457889999999999999999999999999999764
No 147
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.97 E-value=1.7e-32 Score=319.85 Aligned_cols=253 Identities=15% Similarity=0.134 Sum_probs=181.5
Q ss_pred ccceeeeCCCCCccccccccccccccccccCchh-hHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 222 GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 222 g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
|.|.||++.... .+..++.|++........ .....++..++...+||||+.+++....+...+
T Consensus 39 ~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~------------ 102 (389)
T 3gni_B 39 DLMTVNLARYKP----TGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW------------ 102 (389)
T ss_dssp TTEEEEEEEETT----TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE------------
T ss_pred CceEEEEEEEcC----CCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE------------
Confidence 678999998732 356667766543322222 233445777888889999999877766444333
Q ss_pred cCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
++||||+|++|.+++... ...++..+++.|+.||+.||+|||++||+||||||+||||+.++.+|++|||++...
T Consensus 103 ----lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 103 ----VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp ----EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred ----EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 389999999999999764 345888899999999999999999999999999999999999999999999988764
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
........
T Consensus 179 ~~~~~~~~------------------------------------------------------------------------ 186 (389)
T 3gni_B 179 ISHGQRQR------------------------------------------------------------------------ 186 (389)
T ss_dssp EETTEECS------------------------------------------------------------------------
T ss_pred cccccccc------------------------------------------------------------------------
Confidence 42110000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC--CCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~--~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
.........+||++|+|||++.+ ..++.++|||||||+||||+++ |.....
T Consensus 187 ------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 242 (389)
T 3gni_B 187 ------------------------VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA 242 (389)
T ss_dssp ------------------------CBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred ------------------------ccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH
Confidence 00000113578999999999988 6799999999999999999986 433222
Q ss_pred HHHHHHhccccC--------------------------------------------CCCCCCCCChhHHHHHHhccccCC
Q 001366 535 LAAAMSDLRDRI--------------------------------------------LPPSFLSENPKEAGFCLWQLHPEP 570 (1092)
Q Consensus 535 ~~~~~~~~~~~~--------------------------------------------~p~~~~~~~~~~~~li~~lL~~dP 570 (1092)
.......+.... ..+.....++.+.+|+.+||++||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP 322 (389)
T 3gni_B 243 TQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNP 322 (389)
T ss_dssp TTHHHHC--------------------------------------------------------CCHHHHHHHHHHTCSCT
T ss_pred HHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCc
Confidence 212211111100 001223457889999999999999
Q ss_pred CCCCCHHHHhhhhhhhhhhc
Q 001366 571 LSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 571 ~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
.+|||+.|+|+||||.....
T Consensus 323 ~~Rpta~ell~hp~f~~~~~ 342 (389)
T 3gni_B 323 DARPSASTLLNHSFFKQIKR 342 (389)
T ss_dssp TTSCCHHHHTTSGGGGGC--
T ss_pred ccCCCHHHHhcCHHHHHHhh
Confidence 99999999999999987654
No 148
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.97 E-value=7.7e-33 Score=315.06 Aligned_cols=244 Identities=17% Similarity=0.169 Sum_probs=164.2
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCC-CCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNA-SPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..+|.|.||++... ..+..++.|+.... ......++...+.... ||||+.+++....+...+
T Consensus 20 G~G~~g~V~~~~~~----~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~--------- 82 (325)
T 3kn6_A 20 GEGSFSICRKCVHK----KSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTF--------- 82 (325)
T ss_dssp EEETTEEEEEEEET----TTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE---------
T ss_pred ccCCCeEEEEEEEC----CCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEE---------
Confidence 44588999999863 23556666665321 1223334444555554 999999877655333232
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC---cEEEeccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN---QVKYIGPI 374 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~---~vkl~Dfg 374 (1092)
++|||++|++|.+++...+ .+++.+++.|+.||+.||+|||++||+||||||+|||++..+ .+||+|||
T Consensus 83 -------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 154 (325)
T 3kn6_A 83 -------LVMELLNGGELFERIKKKK-HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFG 154 (325)
T ss_dssp -------EEECCCCSCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCT
T ss_pred -------EEEEccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccc
Confidence 3899999999999998764 578889999999999999999999999999999999998766 89999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++.....
T Consensus 155 ~a~~~~~~------------------------------------------------------------------------ 162 (325)
T 3kn6_A 155 FARLKPPD------------------------------------------------------------------------ 162 (325)
T ss_dssp TCEECCC-------------------------------------------------------------------------
T ss_pred cceecCCC------------------------------------------------------------------------
Confidence 98754310
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCc
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDS 531 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~ 531 (1092)
.......+||++|+|||++.+..++.++|||||||++|||+++ |..
T Consensus 163 -------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 211 (325)
T 3kn6_A 163 -------------------------------NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS 211 (325)
T ss_dssp ----------------------------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred -------------------------------CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence 0011245789999999999999999999999999999999986 433
Q ss_pred HHH------HHHHHHhccccCCC---CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 532 ERA------LAAAMSDLRDRILP---PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 532 ~~~------~~~~~~~~~~~~~p---~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
... ....+..+.....+ +.+...++.+.+|+.+||++||.+|||+.++++||||.....
T Consensus 212 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~ 279 (325)
T 3kn6_A 212 HDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ 279 (325)
T ss_dssp ------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCC
T ss_pred CccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCcc
Confidence 221 12223333332222 122356888999999999999999999999999999987543
No 149
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.97 E-value=2.5e-32 Score=314.04 Aligned_cols=249 Identities=15% Similarity=0.092 Sum_probs=188.2
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
..+|.+.+.++ +.|.||++... ..+..++.|+...... ........++..++...+||+++.++.....+..
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 115 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHK----ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred HHHCEEEEEeecCcCcEEEEEEEC----CCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 34555555554 67999999763 2345566665422111 1122344556677888899999987766554333
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
.+ .+|||++|++|.++|...+ .++..+++.|+.||+.||+|||++||+||||||+||||+.++
T Consensus 116 ~~----------------lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g 178 (350)
T 1rdq_E 116 LY----------------MVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178 (350)
T ss_dssp EE----------------EEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred EE----------------EEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCC
Confidence 33 3899999999999998765 477879999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+||+|||+++.....
T Consensus 179 ~~kL~DFg~a~~~~~~---------------------------------------------------------------- 194 (350)
T 1rdq_E 179 YIQVTDFGFAKRVKGR---------------------------------------------------------------- 194 (350)
T ss_dssp CEEECCCTTCEECSSC----------------------------------------------------------------
T ss_pred CEEEcccccceeccCC----------------------------------------------------------------
Confidence 9999999998764310
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
....+||+.|+|||++.+..++.++|||||||+||||+
T Consensus 195 ------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 232 (350)
T 1rdq_E 195 ------------------------------------------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232 (350)
T ss_dssp ------------------------------------------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHh
Confidence 01457999999999999999999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEF 588 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-----a~eiL~~~~~~~~ 588 (1092)
++ |...................| ...++.+.+||.+||++||.+||+ +.||++||||...
T Consensus 233 ~g~~Pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~ 300 (350)
T 1rdq_E 233 AGYPPFFADQPIQIYEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp HSSCSSCCSSHHHHHHHHHHCCCCCC--TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence 86 544433333323333222111 235788999999999999999998 9999999999764
No 150
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.97 E-value=4.3e-33 Score=318.51 Aligned_cols=252 Identities=15% Similarity=0.178 Sum_probs=184.4
Q ss_pred CCchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccCCCCCCCccccceecC
Q 001366 209 SGFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSN 284 (1092)
Q Consensus 209 ~~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (1092)
..+..|.+.+.++ +.|.||++... ..+..++.|+....... .......++..++...+||||+.+++.....
T Consensus 6 ~~i~~Y~i~~~lG~G~~g~V~~a~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 81 (336)
T 3h4j_B 6 RHIGPYIIRETLGEGSFGKVKLATHY----KTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTP 81 (336)
T ss_dssp SEETTEEEEEEEEEETTEEEEEEEET----TTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccCCEEEEEEEecCCCeEEEEEEEC----CCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC
Confidence 3445677766665 78999999852 23556666665321111 1112344566778888999999987765543
Q ss_pred CCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc
Q 001366 285 GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~ 364 (1092)
...+ .+|||+ +|+|.+++...+ .++..+++.++.||+.||.|||++||+||||||+|||++.
T Consensus 82 ~~~~----------------lv~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~ 143 (336)
T 3h4j_B 82 TDIV----------------MVIEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDD 143 (336)
T ss_dssp SEEE----------------EEECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECT
T ss_pred CEEE----------------EEEECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcC
Confidence 3322 379999 789999997665 4777799999999999999999999999999999999999
Q ss_pred CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 365 ~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
++.+||+|||+++.....
T Consensus 144 ~~~~kl~DFG~s~~~~~~-------------------------------------------------------------- 161 (336)
T 3h4j_B 144 NLNVKIADFGLSNIMTDG-------------------------------------------------------------- 161 (336)
T ss_dssp TCCEEECCSSCTBTTTTS--------------------------------------------------------------
T ss_pred CCCEEEEEeccceeccCC--------------------------------------------------------------
Confidence 999999999988654310
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC-CccccchhhhHHHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIYSLGVLFF 523 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-t~~sDIwSLGvll~ 523 (1092)
......+||++|+|||++.+..+ +.++|||||||+||
T Consensus 162 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ 199 (336)
T 3h4j_B 162 ------------------------------------------NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLY 199 (336)
T ss_dssp ------------------------------------------BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHH
Confidence 00114579999999999998776 78999999999999
Q ss_pred HHcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 524 ELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 524 ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
||+++ |...... .....+... .+......++.+.+|+.+||.+||.+|||+.||++||||+..
T Consensus 200 ~ll~g~~Pf~~~~~~-~~~~~i~~~-~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 200 VMLVGRLPFDDEFIP-NLFKKVNSC-VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp HHHHSSCSSBCSSST-TCBCCCCSS-CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred HHHhCCCCCCCccHH-HHHHHHHcC-CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence 99986 3322100 001111111 111222357889999999999999999999999999999864
No 151
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.97 E-value=3.3e-32 Score=314.49 Aligned_cols=249 Identities=15% Similarity=0.134 Sum_probs=177.9
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+.+.++ |.|+||++... ..++.++.|+..... .......++..++...+||||+.++.........+
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~~----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~-- 92 (361)
T 3uc3_A 21 RYDFVKDIGSGNFGVARLMRDK----LTKELVAVKYIERGA--AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLA-- 92 (361)
T ss_dssp TEEEEEEESSSTTSSEEEEEET----TTCCEEEEEEEESST--TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE--
T ss_pred cEEEEEEeccCCCEEEEEEEEC----CCCcEEEEEEEecCc--cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEE--
Confidence 466655554 78999999863 235566666653221 11233446667788889999998877655433333
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc--E
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ--V 368 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~--v 368 (1092)
++||||+|++|.+++...+ .++..+++.|++||+.||.|||++||+||||||+|||++.++. +
T Consensus 93 --------------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~ 157 (361)
T 3uc3_A 93 --------------IIMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRL 157 (361)
T ss_dssp --------------EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCE
T ss_pred --------------EEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceE
Confidence 3899999999999997665 4778799999999999999999999999999999999987765 9
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++.....
T Consensus 158 kl~Dfg~a~~~~~~------------------------------------------------------------------ 171 (361)
T 3uc3_A 158 KICDFGYSKSSVLH------------------------------------------------------------------ 171 (361)
T ss_dssp EECCCCCC------------------------------------------------------------------------
T ss_pred EEeecCcccccccc------------------------------------------------------------------
Confidence 99999988642200
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCcc-ccchhhhHHHHHHcC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTS-SNIYSLGVLFFELFG 527 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~-sDIwSLGvll~ell~ 527 (1092)
......+||++|+|||++.+..++.+ +|||||||+||||++
T Consensus 172 --------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~ 213 (361)
T 3uc3_A 172 --------------------------------------SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLV 213 (361)
T ss_dssp -----------------------------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHh
Confidence 00114579999999999998877655 999999999999998
Q ss_pred C---CCcHHH---HHHHHH-hccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 528 R---FDSERA---LAAAMS-DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 528 ~---f~~~~~---~~~~~~-~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
+ |..... ....+. ........|.....++.+.+|+.+||++||.+|||+.|||+||||...
T Consensus 214 g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 281 (361)
T 3uc3_A 214 GAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN 281 (361)
T ss_dssp SSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred CCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence 6 443221 112222 222222233444568999999999999999999999999999999754
No 152
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.97 E-value=1.3e-32 Score=313.62 Aligned_cols=254 Identities=14% Similarity=0.168 Sum_probs=180.1
Q ss_pred CchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 210 GFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 210 ~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
.+..|.+.+.++ +.|.||++... ..+..++.|++...... .......++..++...+|||++.++.....+..
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDT----VTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHR 107 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEET----TTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTE
T ss_pred chhhEEEEEEEEecCCeEEEEEEEC----CCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCE
Confidence 444676666654 78999999642 12455666665332222 123344567778888999999988777554443
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc---
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL--- 363 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~--- 363 (1092)
.+ ++|||++| +|.+++.... .++..+++.|++||+.||+|||++||+||||||+|||++
T Consensus 108 ~~----------------lv~e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~ 169 (329)
T 3gbz_A 108 LH----------------LIFEYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSD 169 (329)
T ss_dssp EE----------------EEEECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC--
T ss_pred EE----------------EEEecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCC
Confidence 33 38999986 9999998765 477879999999999999999999999999999999994
Q ss_pred --cCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 364 --QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 364 --~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
..+.+||+|||+++....+.
T Consensus 170 ~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------------------- 191 (329)
T 3gbz_A 170 ASETPVLKIGDFGLARAFGIPI---------------------------------------------------------- 191 (329)
T ss_dssp ---CCEEEECCTTHHHHHC-------------------------------------------------------------
T ss_pred CCccceEEECcCCCccccCCcc----------------------------------------------------------
Confidence 44569999999987643100
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhH
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGV 520 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGv 520 (1092)
...+..+||++|+|||++.+. .++.++|||||||
T Consensus 192 ---------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 226 (329)
T 3gbz_A 192 ---------------------------------------------RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIAC 226 (329)
T ss_dssp -----------------------------------------------------CCTTCCHHHHTTCCCCCTHHHHHHHHH
T ss_pred ---------------------------------------------cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHH
Confidence 011245789999999999874 5899999999999
Q ss_pred HHHHHcCC---CCcHHHHHHHHHhccccCCCCC--C-------------C-------------CCChhHHHHHHhccccC
Q 001366 521 LFFELFGR---FDSERALAAAMSDLRDRILPPS--F-------------L-------------SENPKEAGFCLWQLHPE 569 (1092)
Q Consensus 521 ll~ell~~---f~~~~~~~~~~~~~~~~~~p~~--~-------------~-------------~~~~~~~~li~~lL~~d 569 (1092)
+||||+++ |..................|+. + . ..++.+.+|+.+||++|
T Consensus 227 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 306 (329)
T 3gbz_A 227 IWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMD 306 (329)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSS
T ss_pred HHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCC
Confidence 99999985 5554443333333222111110 0 0 14677889999999999
Q ss_pred CCCCCCHHHHhhhhhhhhh
Q 001366 570 PLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 570 P~~Rpsa~eiL~~~~~~~~ 588 (1092)
|.+|||+.|+|+||||...
T Consensus 307 P~~R~t~~e~l~hp~f~~~ 325 (329)
T 3gbz_A 307 PVKRISAKNALEHPYFSHN 325 (329)
T ss_dssp GGGSCCHHHHHTSGGGSSS
T ss_pred hhhCCCHHHHhCCcccCCC
Confidence 9999999999999999864
No 153
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.97 E-value=4.1e-32 Score=301.76 Aligned_cols=255 Identities=19% Similarity=0.151 Sum_probs=189.3
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCch-hhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+.+.++ |.|.||++.... .+..++.|++....... ......++..++...+|||++.+++........+
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~- 81 (284)
T 3kk8_A 7 NYDVKEELGKGAFSVVRRCVHKT----TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY- 81 (284)
T ss_dssp TEEEEEEEEEETTEEEEEEEETT----TCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE-
T ss_pred hhhhhhhhcCcCCeEEEEEEEcC----CCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEE-
Confidence 355555444 789999996522 24556666654333222 2334446677788889999998777654333222
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc--
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ-- 367 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~-- 367 (1092)
.+|||++|++|.+++...+ .++..++..++.||+.||+|||++||+||||||+||+++.++.
T Consensus 82 ---------------~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~ 145 (284)
T 3kk8_A 82 ---------------LVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 145 (284)
T ss_dssp ---------------EEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTC
T ss_pred ---------------EEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCC
Confidence 3899999999999997664 4777799999999999999999999999999999999987665
Q ss_pred -EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 368 -VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 368 -vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
+||+|||++......
T Consensus 146 ~~kl~Dfg~~~~~~~~---------------------------------------------------------------- 161 (284)
T 3kk8_A 146 AVKLADFGLAIEVNDS---------------------------------------------------------------- 161 (284)
T ss_dssp CEEECCCTTCEECCSS----------------------------------------------------------------
T ss_pred cEEEeeceeeEEcccC----------------------------------------------------------------
Confidence 999999988654310
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
.......||+.|+|||.+.+..++.++|||||||++|+|+
T Consensus 162 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~ 201 (284)
T 3kk8_A 162 ----------------------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 201 (284)
T ss_dssp ----------------------------------------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHH
Confidence 0011356899999999999999999999999999999999
Q ss_pred CC---CCcHHHHHHH--HHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhccc
Q 001366 527 GR---FDSERALAAA--MSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1092)
Q Consensus 527 ~~---f~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~~~ 592 (1092)
++ |......... +.........+.+...++.+.+|+.+||++||.+|||+.|+|+||||.......
T Consensus 202 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 272 (284)
T 3kk8_A 202 VGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVA 272 (284)
T ss_dssp HSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCGG
T ss_pred HCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhHH
Confidence 86 4333322222 222222223344556789999999999999999999999999999998765443
No 154
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.97 E-value=2.9e-32 Score=310.51 Aligned_cols=253 Identities=19% Similarity=0.179 Sum_probs=181.3
Q ss_pred hhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC---chhhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM---PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 212 ~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
..|.+.+.++ |.|.||++...... ..+..++.|+...... ........++..++...+|||++.++.....+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGA-NTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSST-TTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccC-CCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 3466655554 78999998752111 1245556655432211 1122334456677888899999988776554333
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
.+ ++|||++|++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 96 ~~----------------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~ 158 (327)
T 3a62_A 96 LY----------------LILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG 158 (327)
T ss_dssp EE----------------EEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTS
T ss_pred EE----------------EEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCC
Confidence 33 3899999999999997765 467779999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+||+|||+++......
T Consensus 159 ~~kl~Dfg~~~~~~~~~--------------------------------------------------------------- 175 (327)
T 3a62_A 159 HVKLTDFGLCKESIHDG--------------------------------------------------------------- 175 (327)
T ss_dssp CEEECCCSCC----------------------------------------------------------------------
T ss_pred cEEEEeCCcccccccCC---------------------------------------------------------------
Confidence 99999999886533100
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
......+||++|+|||++.+..++.++|||||||+||||+
T Consensus 176 ----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 215 (327)
T 3a62_A 176 ----------------------------------------TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215 (327)
T ss_dssp -------------------------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHH
Confidence 0011457899999999999999999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhcccc-CCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLRDR-ILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
++ |............+... .+| ...++.+.+||.+||.+||.+|| ++.++++||||...
T Consensus 216 ~g~~pf~~~~~~~~~~~i~~~~~~~p---~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~ 283 (327)
T 3a62_A 216 TGAPPFTGENRKKTIDKILKCKLNLP---PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283 (327)
T ss_dssp HSSCSCCCSSHHHHHHHHHHTCCCCC---TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred HCCCCCCCCCHHHHHHHHHhCCCCCC---CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence 85 55443333333333222 222 23478899999999999999999 88999999999764
No 155
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.97 E-value=3.8e-32 Score=327.23 Aligned_cols=250 Identities=16% Similarity=0.161 Sum_probs=184.2
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+.+.++ |.|+||++... ..+..++.|+...... ........++..++....||||+.++.........+
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~- 112 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDK----VTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYY- 112 (494)
T ss_dssp HEEEEEEEECC---EEEEEEET----TTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE-
T ss_pred CeEEeeEEecCCCEEEEEEEEC----CCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE-
Confidence 455555554 78999999862 2345566665533221 222344556777888899999999877655333332
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC---C
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS---N 366 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~---~ 366 (1092)
++||||.|++|.+++...+ .++..+++.|++||+.||.|||++||+||||||+|||++.. +
T Consensus 113 ---------------lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 176 (494)
T 3lij_A 113 ---------------LVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDA 176 (494)
T ss_dssp ---------------EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTC
T ss_pred ---------------EEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCC
Confidence 3899999999999997664 47777999999999999999999999999999999999764 4
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+||+|||+++.....
T Consensus 177 ~~kl~DfG~a~~~~~~---------------------------------------------------------------- 192 (494)
T 3lij_A 177 LIKIVDFGLSAVFENQ---------------------------------------------------------------- 192 (494)
T ss_dssp CEEECCCTTCEECBTT----------------------------------------------------------------
T ss_pred cEEEEECCCCeECCCC----------------------------------------------------------------
Confidence 5999999998764310
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
......+||++|+|||++. ..|+.++|||||||+||+|+
T Consensus 193 ----------------------------------------~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll 231 (494)
T 3lij_A 193 ----------------------------------------KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILL 231 (494)
T ss_dssp ----------------------------------------BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHH
Confidence 0112457999999999986 46999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccc--cCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
++ |.+............. ...++.+...++.+.+|+.+||++||.+|||+.++|+||||...
T Consensus 232 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 232 AGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp HSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 86 5444333332222222 22334556778999999999999999999999999999999874
No 156
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.97 E-value=1.3e-32 Score=319.80 Aligned_cols=253 Identities=16% Similarity=0.153 Sum_probs=187.0
Q ss_pred CchhHHHhhhcc--ccceeeeCCCCCcccccccccccccccccc--CchhhHhhhhhhhhhccCCCCCCCccccceecCC
Q 001366 210 GFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTT--MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNG 285 (1092)
Q Consensus 210 ~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (1092)
.+..|.+.+.++ |.|.||++...+ .+..++.|+..... .........++..++...+||||+.++.......
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~----~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 88 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKND----TKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE 88 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETT----TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECC----CCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence 455666666555 789999997632 34556666542211 1112234456677788889999998876655433
Q ss_pred CCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC
Q 001366 286 SLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS 365 (1092)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~ 365 (1092)
..+ .+|||+.||+|.+++...+ .++..+++.|+.||+.||.|||++||+||||||+||||+.+
T Consensus 89 ~~~----------------lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~ 151 (384)
T 4fr4_A 89 DMF----------------MVVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEH 151 (384)
T ss_dssp EEE----------------EEECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred EEE----------------EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCC
Confidence 333 3899999999999998754 57788999999999999999999999999999999999999
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+.+||+|||+++.+...
T Consensus 152 g~vkL~DFG~a~~~~~~--------------------------------------------------------------- 168 (384)
T 4fr4_A 152 GHVHITDFNIAAMLPRE--------------------------------------------------------------- 168 (384)
T ss_dssp SCEEECCCTTCEECCTT---------------------------------------------------------------
T ss_pred CCEEEeccceeeeccCC---------------------------------------------------------------
Confidence 99999999998764310
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC---CCCCccccchhhhHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---GVCTTSSNIYSLGVLF 522 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~---~~~t~~sDIwSLGvll 522 (1092)
......+||++|+|||++.+ ..++.++|||||||+|
T Consensus 169 -----------------------------------------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il 207 (384)
T 4fr4_A 169 -----------------------------------------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTA 207 (384)
T ss_dssp -----------------------------------------CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHH
T ss_pred -----------------------------------------CceeccCCCccccCCeeeccCCCCCCCccceeechHHHH
Confidence 01125679999999999974 4589999999999999
Q ss_pred HHHcCC---CCc--HHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC-HHHHhhhhhhhhh
Q 001366 523 FELFGR---FDS--ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-TREILQSEVTNEF 588 (1092)
Q Consensus 523 ~ell~~---f~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-a~eiL~~~~~~~~ 588 (1092)
|||+++ |.. ..........+.... ++.....++.+.+||.+||++||.+||+ +.+|++||||...
T Consensus 208 ~elltG~~Pf~~~~~~~~~~~~~~~~~~~-~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~ 278 (384)
T 4fr4_A 208 YELLRGRRPYHIRSSTSSKEIVHTFETTV-VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI 278 (384)
T ss_dssp HHHHHSSCSSCCCTTSCHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred HHHHhCCCCCCCCCCccHHHHHHHHhhcc-cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence 999986 432 111222222222111 1222345788999999999999999998 8999999999864
No 157
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.97 E-value=5.4e-32 Score=322.76 Aligned_cols=286 Identities=14% Similarity=0.156 Sum_probs=179.2
Q ss_pred HHHhhhcc--ccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.++ +.|+||++... ..+..++.|+..... .........++..++...+||||+.+++.........
T Consensus 55 y~~~~~lG~G~~g~V~~~~~~----~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~-- 128 (458)
T 3rp9_A 55 YEIRHLIGTGSYGHVCEAYDK----LEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEK-- 128 (458)
T ss_dssp EEECCC-------CEEEEEEC----C--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT--
T ss_pred eEEeeEeeecCCeEEEEEEEC----CCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCccc--
Confidence 55555544 78999999652 235566666543222 2233445567888889999999999877654322111
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
... ..++|||+ +++|.++++..+ .++..+++.|+.||+.||+|||++||+||||||+||||+.++.+||
T Consensus 129 ----~~~-----~~lv~e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl 197 (458)
T 3rp9_A 129 ----FDE-----LYVVLEIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKV 197 (458)
T ss_dssp ----CCC-----EEEEECCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEE
T ss_pred ----Cce-----EEEEEecc-ccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEee
Confidence 001 11368876 579999997654 5788899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++............ .. .. ......+.+++
T Consensus 198 ~DFGla~~~~~~~~~~~~~----~~-----------------------------------------~~-~~~~~~~~~~~ 231 (458)
T 3rp9_A 198 CDFGLARTVDYPENGNSQL----PI-----------------------------------------SP-REDDMNLVTFP 231 (458)
T ss_dssp CCCTTCBCTTSCTTCCCCC----C--------------------------------------------------------
T ss_pred cccccchhccCcccccccc----cc-----------------------------------------Cc-ccccccccccc
Confidence 9999998765221100000 00 00 00000000000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc-CCCCCccccchhhhHHHHHHcCC-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS-GGVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-~~~~t~~sDIwSLGvll~ell~~- 528 (1092)
. .......++..+||+||+|||++. +..|+.++|||||||+||||+++
T Consensus 232 ~------------------------------~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~ 281 (458)
T 3rp9_A 232 H------------------------------TKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281 (458)
T ss_dssp -------------------------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred c------------------------------cccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhc
Confidence 0 001122345789999999999864 56799999999999999999972
Q ss_pred -------------CCcHH--------------------HHHHH--HHhccc---------------------------cC
Q 001366 529 -------------FDSER--------------------ALAAA--MSDLRD---------------------------RI 546 (1092)
Q Consensus 529 -------------f~~~~--------------------~~~~~--~~~~~~---------------------------~~ 546 (1092)
|++.. ...+. +..+.. ..
T Consensus 282 ~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (458)
T 3rp9_A 282 KENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTD 361 (458)
T ss_dssp TTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCC
T ss_pred cccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCC
Confidence 32221 01111 100000 01
Q ss_pred CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhccc
Q 001366 547 LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1092)
Q Consensus 547 ~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~~~ 592 (1092)
+...++..++.+.+||.+||.+||.+|||+.|+|+||||.+.....
T Consensus 362 ~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~~ 407 (458)
T 3rp9_A 362 LAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAE 407 (458)
T ss_dssp GGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCGG
T ss_pred HHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCCc
Confidence 1123455688899999999999999999999999999999875544
No 158
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.97 E-value=8.2e-32 Score=323.68 Aligned_cols=251 Identities=16% Similarity=0.192 Sum_probs=187.2
Q ss_pred hHHHhhhcc--ccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+.+.++ +.|+||++... ..+..++.|+..... .........++..++...+||||+.++.........+
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~- 97 (486)
T 3mwu_A 23 RYNIVCMLGKGSFGEVLKCKDR----ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY- 97 (486)
T ss_dssp HEEEEEEEECCSSSEEEEEEET----TTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE-
T ss_pred ceEEeEEEeecCCEEEEEEEEC----CCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEE-
Confidence 355555554 78999999762 235566666652211 1223344556777888889999999877655433333
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc---cCC
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL---QSN 366 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~---~~~ 366 (1092)
++||||.|++|.+++...+ .++..+++.|++||+.||.|||++||+||||||+|||++ ..+
T Consensus 98 ---------------lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 161 (486)
T 3mwu_A 98 ---------------IVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDC 161 (486)
T ss_dssp ---------------EEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTC
T ss_pred ---------------EEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCC
Confidence 3899999999999997664 477889999999999999999999999999999999995 456
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+||+|||+++.....
T Consensus 162 ~~kl~Dfg~a~~~~~~---------------------------------------------------------------- 177 (486)
T 3mwu_A 162 DIKIIDFGLSTCFQQN---------------------------------------------------------------- 177 (486)
T ss_dssp CEEECSCSCTTTBCCC----------------------------------------------------------------
T ss_pred CEEEEECCcCeECCCC----------------------------------------------------------------
Confidence 7999999998754310
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
......+||++|+|||++.+ .|+.++|||||||+||+|+
T Consensus 178 ----------------------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll 216 (486)
T 3mwu_A 178 ----------------------------------------TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILL 216 (486)
T ss_dssp --------------------------------------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHH
Confidence 01124579999999999986 5999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccc--cCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
++ |.+............. ....+.+...++.+.+||.+||++||.+|||+.++|+||||....
T Consensus 217 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~ 284 (486)
T 3mwu_A 217 SGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284 (486)
T ss_dssp HSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTC
T ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCc
Confidence 85 5444333332222222 222344556788999999999999999999999999999998754
No 159
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.97 E-value=1.6e-32 Score=327.64 Aligned_cols=257 Identities=14% Similarity=0.164 Sum_probs=179.9
Q ss_pred hHHHhhhc--cccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+.+.+ +|.|+||++... ..+..++.|+..... .........++..++...+||||+.+++.........
T Consensus 63 ~y~~~~~lG~G~~g~V~~a~~~----~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~- 137 (464)
T 3ttj_A 63 RYQNLKPIGSGAQGIVCAAYDA----VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE- 137 (464)
T ss_dssp TEEEEEEEEECSSCEEEEEEET----TTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTT-
T ss_pred CeEEEEEeecCCCeEEEEEEEC----CCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccc-
Confidence 35555544 478999999652 235566666653322 2233445567778888999999998877654332211
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
... ...++|||++|+ |.+.+.. .++..+++.|++||+.||+|||++||+||||||+||||+.++.+|
T Consensus 138 ----~~~-----~~~lv~E~~~~~-l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~k 204 (464)
T 3ttj_A 138 ----EFQ-----DVYLVMELMDAN-LCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 204 (464)
T ss_dssp ----TCC-----EEEEEEECCSEE-HHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred ----cCC-----eEEEEEeCCCCC-HHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEE
Confidence 000 012489999875 6666643 377889999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+++.....
T Consensus 205 l~DFG~a~~~~~~------------------------------------------------------------------- 217 (464)
T 3ttj_A 205 ILDFGLARTAGTS------------------------------------------------------------------- 217 (464)
T ss_dssp ECCCCCC-----C-------------------------------------------------------------------
T ss_pred EEEEEeeeecCCC-------------------------------------------------------------------
Confidence 9999998764310
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC-
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~- 528 (1092)
...+..+||++|+|||++.+..|+.++|||||||+||||+++
T Consensus 218 -------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~ 260 (464)
T 3ttj_A 218 -------------------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260 (464)
T ss_dssp -------------------------------------CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred -------------------------------------cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCC
Confidence 011256899999999999999999999999999999999985
Q ss_pred --CCcHHHHHHHHHhccccCCC----------------------------CCCCC-----C-------ChhHHHHHHhcc
Q 001366 529 --FDSERALAAAMSDLRDRILP----------------------------PSFLS-----E-------NPKEAGFCLWQL 566 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p----------------------------~~~~~-----~-------~~~~~~li~~lL 566 (1092)
|.+.....++...+.....| ..++. . ++.+.+|+.+||
T Consensus 261 ~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL 340 (464)
T 3ttj_A 261 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 340 (464)
T ss_dssp CSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHc
Confidence 66554433332222110000 00000 0 356789999999
Q ss_pred ccCCCCCCCHHHHhhhhhhhhhhcc
Q 001366 567 HPEPLSRPTTREILQSEVTNEFQEV 591 (1092)
Q Consensus 567 ~~dP~~Rpsa~eiL~~~~~~~~~~~ 591 (1092)
++||.+|||++|+|+||||+.....
T Consensus 341 ~~dP~~R~ta~e~L~Hp~~~~~~~~ 365 (464)
T 3ttj_A 341 VIDPAKRISVDDALQHPYINVWYDP 365 (464)
T ss_dssp CSSTTTSCCHHHHHTSTTTGGGCCH
T ss_pred CCChhhCCCHHHHhcChhhhhccCc
Confidence 9999999999999999999865443
No 160
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.97 E-value=8.2e-32 Score=300.30 Aligned_cols=250 Identities=17% Similarity=0.159 Sum_probs=180.8
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+++.++ |.|.||++.... .+..++.|+..............++...+...+|||++.+++........+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~-- 96 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERS----SGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMY-- 96 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETT----TCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE--
T ss_pred heeecceeccCCCeEEEEEEEcc----CCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEE--
Confidence 355555554 789999987522 244455555433333333345556777888889999998877654333222
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE---cc
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL---LQ 364 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill---~~ 364 (1092)
++|||++|++|.+++.. .+..++..+++.|+.||+.||+|||++||+||||||+||++ +.
T Consensus 97 --------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~ 162 (285)
T 3is5_A 97 --------------IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSP 162 (285)
T ss_dssp --------------EEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSST
T ss_pred --------------EEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCC
Confidence 38999999999999954 34568888999999999999999999999999999999999 45
Q ss_pred CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 365 ~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
.+.+||+|||+++......
T Consensus 163 ~~~~kl~Dfg~a~~~~~~~------------------------------------------------------------- 181 (285)
T 3is5_A 163 HSPIKIIDFGLAELFKSDE------------------------------------------------------------- 181 (285)
T ss_dssp TCCEEECCCCCCCC------------------------------------------------------------------
T ss_pred CCCEEEEeeecceecCCcc-------------------------------------------------------------
Confidence 6789999999886543100
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~e 524 (1092)
......||+.|+|||.+. ..++.++|||||||+|||
T Consensus 182 -------------------------------------------~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ 217 (285)
T 3is5_A 182 -------------------------------------------HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYF 217 (285)
T ss_dssp ------------------------------------------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHH
Confidence 011456899999999986 578999999999999999
Q ss_pred HcCC---CCcHHHHHHHHHh-ccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 525 LFGR---FDSERALAAAMSD-LRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 525 ll~~---f~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
|+++ |............ ......+......++.+.+|+.+||++||.+|||+.|+|+||||.+
T Consensus 218 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 218 LLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred HHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 9985 4433222222211 1222233333446789999999999999999999999999999975
No 161
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.97 E-value=7.9e-32 Score=308.96 Aligned_cols=249 Identities=15% Similarity=0.150 Sum_probs=180.4
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+.+.++ +.|+||++... ..+..++.|+.......... ....+.....||||+.+++....+...+
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~----~~~~~~avK~~~~~~~~~~~----E~~~l~~~~~hp~iv~~~~~~~~~~~~~-- 92 (342)
T 2qr7_A 23 GYEVKEDIGVGSYSVCKRCIHK----ATNMEFAVKIIDKSKRDPTE----EIEILLRYGQHPNIITLKDVYDDGKYVY-- 92 (342)
T ss_dssp HEEEEEEEEECSSEEEEEEEET----TTTEEEEEEEEETTTCCCHH----HHHHHHHHTTSTTBCCEEEEEECSSEEE--
T ss_pred cEEEEEEEeeCCCEEEEEEEEC----CCCCEEEEEEEEcccCChHH----HHHHHHHhcCCCCcCeEEEEEEcCCEEE--
Confidence 455555544 68999999762 23556666665332222111 1122334458999998877655433333
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC----C
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS----N 366 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~----~ 366 (1092)
.+||||+||+|.+++...+ .+++.++..+++||+.||+|||++||+||||||+|||+... +
T Consensus 93 --------------lv~E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~ 157 (342)
T 2qr7_A 93 --------------VVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPE 157 (342)
T ss_dssp --------------EEECCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGG
T ss_pred --------------EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcC
Confidence 3899999999999997664 47888999999999999999999999999999999998543 3
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+||+|||+++......
T Consensus 158 ~~kl~Dfg~a~~~~~~~--------------------------------------------------------------- 174 (342)
T 2qr7_A 158 SIRICDFGFAKQLRAEN--------------------------------------------------------------- 174 (342)
T ss_dssp GEEECCCTTCEECBCTT---------------------------------------------------------------
T ss_pred eEEEEECCCcccCcCCC---------------------------------------------------------------
Confidence 59999999987644100
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
......+||+.|+|||++.+..++.++|||||||+||||+
T Consensus 175 ----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 214 (342)
T 2qr7_A 175 ----------------------------------------GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTML 214 (342)
T ss_dssp ----------------------------------------CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHh
Confidence 0011457899999999999888999999999999999999
Q ss_pred CC---CCcH--HHHHHHHHhccccC---CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 527 GR---FDSE--RALAAAMSDLRDRI---LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 527 ~~---f~~~--~~~~~~~~~~~~~~---~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
++ |... ......+..+.... .++.+...++.+.+|+.+||++||.+|||+.++|+||||....
T Consensus 215 ~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~~ 285 (342)
T 2qr7_A 215 TGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWD 285 (342)
T ss_dssp HSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTGG
T ss_pred cCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCcc
Confidence 86 4321 12222222222222 1223456788999999999999999999999999999997643
No 162
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.97 E-value=1.9e-32 Score=321.27 Aligned_cols=252 Identities=17% Similarity=0.111 Sum_probs=186.5
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
.|.+.+.+ +|.|.||++.... .+..++.|+...... ..+.....++..++...+||||+.++.....+...+
T Consensus 70 ~y~~~~~LG~G~fG~V~~~~~~~----~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 145 (410)
T 3v8s_A 70 DYEVVKVIGRGAFGEVQLVRHKS----TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY 145 (410)
T ss_dssp GEEEEEEEEECSSEEEEEEEETT----TCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEEEEEcCCCEEEEEEEECC----CCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE
Confidence 34444444 4789999997632 245556655422110 111122334556677889999999877655443333
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
.+||||+||+|.++++.. .+++..++.|+.||+.||+|||++||+||||||+||||+.++.+
T Consensus 146 ----------------lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~i 207 (410)
T 3v8s_A 146 ----------------MVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL 207 (410)
T ss_dssp ----------------EEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCE
T ss_pred ----------------EEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCE
Confidence 389999999999999764 47888999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++......
T Consensus 208 kL~DFG~a~~~~~~~----------------------------------------------------------------- 222 (410)
T 3v8s_A 208 KLADFGTCMKMNKEG----------------------------------------------------------------- 222 (410)
T ss_dssp EECCCTTCEECCTTS-----------------------------------------------------------------
T ss_pred EEeccceeEeeccCC-----------------------------------------------------------------
Confidence 999999987644100
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC----CCccccchhhhHHHHH
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV----CTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~----~t~~sDIwSLGvll~e 524 (1092)
.......+||+.|+|||++.+.. ++.++|||||||+|||
T Consensus 223 -------------------------------------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilye 265 (410)
T 3v8s_A 223 -------------------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE 265 (410)
T ss_dssp -------------------------------------EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHH
T ss_pred -------------------------------------cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHH
Confidence 00012568999999999998755 8899999999999999
Q ss_pred HcCC---CCcHHHHHHHHHhccc--cCCCCCCCCCChhHHHHHHhccccCCCC--CCCHHHHhhhhhhhhh
Q 001366 525 LFGR---FDSERALAAAMSDLRD--RILPPSFLSENPKEAGFCLWQLHPEPLS--RPTTREILQSEVTNEF 588 (1092)
Q Consensus 525 ll~~---f~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~li~~lL~~dP~~--Rpsa~eiL~~~~~~~~ 588 (1092)
|++| |.+..........+.. ....|.....++.+.+||.+||..+|.+ ||++.||++||||...
T Consensus 266 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 266 MLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336 (410)
T ss_dssp HHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred HHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence 9985 5544433333333322 2233444567899999999999999988 9999999999999875
No 163
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.97 E-value=5.3e-32 Score=313.85 Aligned_cols=250 Identities=16% Similarity=0.128 Sum_probs=181.4
Q ss_pred hhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCch--hhHhhhhhhh-hhccCCCCCCCccccceecCCC
Q 001366 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS--DAALKAAGAM-MVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 212 ~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
..|.+.+.++ +.|.||++.... .+..++.|+........ ......++.. ++...+||||+.++........
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~----~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~ 113 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKA----EEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK 113 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETT----TCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcC----CCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCE
Confidence 3455555554 689999997632 24555666553322211 1112222222 3567799999988766554433
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
.+ .+|||++||+|.++|...+ .+++.+++.++.||+.||+|||++||+||||||+||||+.+|
T Consensus 114 ~~----------------lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g 176 (373)
T 2r5t_A 114 LY----------------FVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG 176 (373)
T ss_dssp EE----------------EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred EE----------------EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCC
Confidence 33 3899999999999997764 467779999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+||+|||+++......
T Consensus 177 ~ikL~DFG~a~~~~~~~--------------------------------------------------------------- 193 (373)
T 2r5t_A 177 HIVLTDFGLCKENIEHN--------------------------------------------------------------- 193 (373)
T ss_dssp CEEECCCCBCGGGBCCC---------------------------------------------------------------
T ss_pred CEEEeeCccccccccCC---------------------------------------------------------------
Confidence 99999999987633100
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
......+||+.|+|||++.+..++.++|||||||+||||+
T Consensus 194 ----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 233 (373)
T 2r5t_A 194 ----------------------------------------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233 (373)
T ss_dssp ----------------------------------------CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHH
Confidence 0012568999999999999999999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccccC-CCCCCCCCChhHHHHHHhccccCCCCCCCH----HHHhhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLRDRI-LPPSFLSENPKEAGFCLWQLHPEPLSRPTT----REILQSEVTNEF 588 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa----~eiL~~~~~~~~ 588 (1092)
++ |............+.... +| ...++.+.+||.+||++||.+||++ .+|++||||...
T Consensus 234 ~G~~Pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~ 300 (373)
T 2r5t_A 234 YGLPPFYSRNTAEMYDNILNKPLQLK---PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI 300 (373)
T ss_dssp HSSCTTCCSBHHHHHHHHHHSCCCCC---SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred cCCCCCCCCCHHHHHHHHHhcccCCC---CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence 86 544433333333333221 22 2357889999999999999999997 699999999864
No 164
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.1e-30 Score=291.15 Aligned_cols=255 Identities=20% Similarity=0.234 Sum_probs=211.9
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecC-CCCEEEEEECCCc
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNY-IKNYLASADYDGV 852 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~-~~~~LaSgs~Dgt 852 (1092)
.+.+|...|++++|+|++++||+|+.|+.|+||++... .........+|...|.+++|+++ .+.+|++|+.||+
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~-----~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE-----THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETT-----EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCC-----cceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 35689999999999999999999999999999998631 12222345579999999999864 2789999999999
Q ss_pred EEEEECCCCc--eEEEeeccCccEEEEEEecCC--CCEEEEEeCCCcEEEEecCCCceee--eE-ecCCceEEEEEccC-
Q 001366 853 VKLWDACTGQ--TVSHYIEHEKRAWSVDFSQVH--PTKLASGSDDCSVKLWNINEKNSLA--TI-KNIANVCCVQFSAH- 924 (1092)
Q Consensus 853 V~IWD~~tg~--~i~~l~~h~~~V~sv~fsp~~--~~~laSgs~Dg~I~iWDl~~~~~l~--~l-~~~~~V~sl~fsp~- 924 (1092)
|++||+.+++ .+..+..|...|++++|+| + +.+|++++.|+.|++||++++.... .+ .+...|.+++|+|.
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCC-CCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence 9999999987 7778888999999999999 6 8899999999999999999874433 23 36788999999994
Q ss_pred ------------CCeEEEEEECCCeEEEEEcCCCCc---ceEEecCCCCCeEEEEEcC----CCEEEEEECCCeEEEEEc
Q 001366 925 ------------SSHLLAFGSADYRTYCYDLRNARA---PWCVLAGHEKAVSYVKFLD----SGTLVTASTDNKLKLWDL 985 (1092)
Q Consensus 925 ------------~~~~latgs~Dg~I~vwDlr~~~~---~~~~l~~H~~~V~~v~fs~----~~~L~Sgs~Dg~I~vWDl 985 (1092)
+ .+|++|+.|+.|++||+++... ....+.+|...|.+++|++ +.+|++++.||.|++||+
T Consensus 160 ~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 160 IEEDGEHNGTKES-RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp ----------CTT-CEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred ccccccccCCCCC-CEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 5 5999999999999999987653 3456789999999999994 578999999999999999
Q ss_pred CCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCC
Q 001366 986 KRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLP 1038 (1092)
Q Consensus 986 ~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~ 1038 (1092)
+..... ..........|...|++++|+|++.+|++++.||.|++|++...
T Consensus 239 ~~~~~~---~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 239 DNEQGP---WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp SSTTSC---CEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred CCCCcc---ceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 853211 01122223348889999999999999999999999999998743
No 165
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.97 E-value=5e-32 Score=311.21 Aligned_cols=270 Identities=13% Similarity=0.097 Sum_probs=190.6
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCch-hhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
+..|.+.+.++ |.|.||++... ..+..++.|+........ ......++..++...+|||++.+++........
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 91 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHR----KTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP 91 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEET----TTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC---
T ss_pred ccceeEEEEEecCCCcEEEEEEEC----CCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccc
Confidence 34566666555 78999999762 225566666553333222 233445677788888999999887765543221
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~ 367 (1092)
+. ...+. ..++||||+| +|.+++......++..+++.|+.||+.||+|||++||+||||||+|||++.++.
T Consensus 92 ~~-~~~~~-------~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~ 162 (351)
T 3mi9_A 92 YN-RCKGS-------IYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV 162 (351)
T ss_dssp ------CE-------EEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSC
T ss_pred cc-cCCce-------EEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCC
Confidence 10 00011 1248999986 888888776667889899999999999999999999999999999999999999
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+||+|||+++.+......
T Consensus 163 ~kl~Dfg~a~~~~~~~~~-------------------------------------------------------------- 180 (351)
T 3mi9_A 163 LKLADFGLARAFSLAKNS-------------------------------------------------------------- 180 (351)
T ss_dssp EEECCCTTCEECCCCSSS--------------------------------------------------------------
T ss_pred EEEccchhcccccccccc--------------------------------------------------------------
Confidence 999999999765411000
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHc
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell 526 (1092)
........+||++|+|||++.+ ..++.++|||||||+||||+
T Consensus 181 -------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 223 (351)
T 3mi9_A 181 -------------------------------------QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 223 (351)
T ss_dssp -------------------------------------SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHH
T ss_pred -------------------------------------cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHH
Confidence 0011225678999999999987 56899999999999999999
Q ss_pred CC---CCcHHH--HHHHHHhccccCCCCCCCC----------------------------CChhHHHHHHhccccCCCCC
Q 001366 527 GR---FDSERA--LAAAMSDLRDRILPPSFLS----------------------------ENPKEAGFCLWQLHPEPLSR 573 (1092)
Q Consensus 527 ~~---f~~~~~--~~~~~~~~~~~~~p~~~~~----------------------------~~~~~~~li~~lL~~dP~~R 573 (1092)
++ |.+... ....+........+..+.. .++.+.+|+.+||++||.+|
T Consensus 224 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 303 (351)
T 3mi9_A 224 TRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQR 303 (351)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGS
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhC
Confidence 86 444332 2222333333222222221 15678899999999999999
Q ss_pred CCHHHHhhhhhhhhhhccc
Q 001366 574 PTTREILQSEVTNEFQEVC 592 (1092)
Q Consensus 574 psa~eiL~~~~~~~~~~~~ 592 (1092)
||+.|+|+||||.....+.
T Consensus 304 ~t~~e~l~hp~f~~~~~~~ 322 (351)
T 3mi9_A 304 IDSDDALNHDFFWSDPMPS 322 (351)
T ss_dssp CCHHHHHTSGGGGSSSCCC
T ss_pred CCHHHHhCCCCcCCCCCcc
Confidence 9999999999998755443
No 166
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.97 E-value=3.2e-32 Score=319.51 Aligned_cols=253 Identities=15% Similarity=0.092 Sum_probs=184.9
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
.|.+.+.+ +|.|.||++... ..++.++.|+....... .......++..++....||+++.++.....+...+
T Consensus 62 ~f~~~~~lG~G~fG~V~~~~~~----~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~ 137 (412)
T 2vd5_A 62 DFEILKVIGRGAFSEVAVVKMK----QTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLY 137 (412)
T ss_dssp GEEEEEEEEECSSCEEEEEEET----TTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred hEEEEEEEeeCCCeEEEEEEEC----CCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 34444444 378999999863 23556666665221111 11112334455667779999998877665444333
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
++|||+.||+|.++|...+..+++..++.|+.||+.||+|||++||+||||||+||||+.++.+
T Consensus 138 ----------------lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~v 201 (412)
T 2vd5_A 138 ----------------LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHI 201 (412)
T ss_dssp ----------------EEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCE
T ss_pred ----------------EEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCE
Confidence 3899999999999998776678888999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++......
T Consensus 202 kL~DFGla~~~~~~~----------------------------------------------------------------- 216 (412)
T 2vd5_A 202 RLADFGSCLKLRADG----------------------------------------------------------------- 216 (412)
T ss_dssp EECCCTTCEECCTTS-----------------------------------------------------------------
T ss_pred EEeechhheeccCCC-----------------------------------------------------------------
Confidence 999999987644100
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc-------CCCCCccccchhhhHH
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS-------GGVCTTSSNIYSLGVL 521 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-------~~~~t~~sDIwSLGvl 521 (1092)
.......+||+.|+|||++. +..|+.++|||||||+
T Consensus 217 -------------------------------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvi 259 (412)
T 2vd5_A 217 -------------------------------------TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVF 259 (412)
T ss_dssp -------------------------------------CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHH
T ss_pred -------------------------------------ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHH
Confidence 00011458999999999997 3578999999999999
Q ss_pred HHHHcCC---CCcHHHHHHHHHhcc---ccCCCCCCCCCChhHHHHHHhccccCCCCC---CCHHHHhhhhhhhhh
Q 001366 522 FFELFGR---FDSERALAAAMSDLR---DRILPPSFLSENPKEAGFCLWQLHPEPLSR---PTTREILQSEVTNEF 588 (1092)
Q Consensus 522 l~ell~~---f~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~li~~lL~~dP~~R---psa~eiL~~~~~~~~ 588 (1092)
||||++| |............+. ...+|......++++.+||.+||+ +|.+| |+++||++||||...
T Consensus 260 lyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i 334 (412)
T 2vd5_A 260 AYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL 334 (412)
T ss_dssp HHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence 9999986 554443333322222 122343334568899999999999 99998 599999999999875
No 167
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1.8e-29 Score=283.36 Aligned_cols=261 Identities=16% Similarity=0.203 Sum_probs=209.9
Q ss_pred eeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCC----ceEEEeeccCccEEEEEEecC-CCCEEEEEeCCCcEE
Q 001366 823 VEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG----QTVSHYIEHEKRAWSVDFSQV-HPTKLASGSDDCSVK 897 (1092)
Q Consensus 823 ~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg----~~i~~l~~h~~~V~sv~fsp~-~~~~laSgs~Dg~I~ 897 (1092)
...+|...|++++|+|+ +.+|++|+.||+|+|||+.++ +.+..+.+|...|++++|+|. ++.+|++|+.|++|+
T Consensus 6 ~~~gH~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFY-GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp EECCCSSCEEEEEECSS-SSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred cCcccccceeEEEEcCC-CCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 45679999999999998 899999999999999999876 467788899999999999985 488999999999999
Q ss_pred EEecCCC---------ceeeeEe-cCCceEEEEEccC--CCeEEEEEECCCeEEEEEcCCCCcceE------------Ee
Q 001366 898 LWNINEK---------NSLATIK-NIANVCCVQFSAH--SSHLLAFGSADYRTYCYDLRNARAPWC------------VL 953 (1092)
Q Consensus 898 iWDl~~~---------~~l~~l~-~~~~V~sl~fsp~--~~~~latgs~Dg~I~vwDlr~~~~~~~------------~l 953 (1092)
+||++++ +.+..+. +...|.+++|+|+ + .+|++++.|+.|++||+++.+.... ..
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLG-LKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCC-cEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 9999987 3455554 6788999999998 7 4899999999999999987653211 11
Q ss_pred cCCCCCeEEEEEcC----CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCC----CEEEEEe
Q 001366 954 AGHEKAVSYVKFLD----SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTAD----GYIACGS 1025 (1092)
Q Consensus 954 ~~H~~~V~~v~fs~----~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg----~~lasgs 1025 (1092)
.+|...+.++.|++ +..|++++.|+.+.+|+.... ....+..+.+|...|++++|+|++ .+|++|+
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~ 237 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDG------KLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGC 237 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTS------CEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEE
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCC------ceeeeeecCCCCcceeEEEECCCCCCcceEEEEEc
Confidence 26888999999984 678999999999988887632 123467788999999999999998 7999999
Q ss_pred cCCcEEEEeCCCCCceeeeecccc------------------------------CC--CCCccccCCCCCCEEEEEEeCC
Q 001366 1026 ESNEVYAYHRSLPMPITSYKFGSI------------------------------DP--ISGKETDDDNGLFVSSVCWRRR 1073 (1092)
Q Consensus 1026 ~Dg~I~Iwd~~~~~~i~~~~~~~~------------------------------~~--i~~~~~~~~h~~~V~sva~spd 1073 (1092)
.|+.|++||+..+........... +. ........+|...|++++|+|+
T Consensus 238 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 317 (351)
T 3f3f_A 238 KDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLT 317 (351)
T ss_dssp TTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSS
T ss_pred CCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCC
Confidence 999999999876532211100000 00 0011234578899999999999
Q ss_pred CCEEEEEecCCeEEEEEc
Q 001366 1074 SDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1074 ~~~Lasgs~DG~V~vW~l 1091 (1092)
+.+|++|+.||.|+||++
T Consensus 318 ~~~l~s~~~dg~v~iw~~ 335 (351)
T 3f3f_A 318 GTILSSAGDDGKVRLWKA 335 (351)
T ss_dssp SCCEEEEETTSCEEEEEE
T ss_pred CCEEEEecCCCcEEEEec
Confidence 999999999999999986
No 168
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.97 E-value=2.5e-32 Score=316.24 Aligned_cols=257 Identities=16% Similarity=0.214 Sum_probs=173.2
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccc-cCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTT-TMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.++ +.|+||+|... ..+..++.|+.... ..........++..++...+|||++.+++.........
T Consensus 31 y~~~~~lG~G~~g~V~~a~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~-- 104 (367)
T 2fst_X 31 YQNLSPVGSGAYGSVCAAFDT----KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE-- 104 (367)
T ss_dssp EEEEEECC----CCEEEEEET----TTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG--
T ss_pred eEEeeEEeecCCeEEEEEEEC----CCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccc--
Confidence 44444444 68999999642 22556666655332 22233455667788888999999998776644221111
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
.. ....++|+++ |++|.++++.. .++..+++.++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus 105 ---~~-----~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL 173 (367)
T 2fst_X 105 ---EF-----NDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173 (367)
T ss_dssp ---GC-----CCCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred ---cC-----CeEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEE
Confidence 00 1112356666 89999999763 5888899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++....
T Consensus 174 ~DFG~a~~~~~--------------------------------------------------------------------- 184 (367)
T 2fst_X 174 LDFGLARHTAD--------------------------------------------------------------------- 184 (367)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred eeccccccccc---------------------------------------------------------------------
Confidence 99998865331
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~- 528 (1092)
..+..+||++|+|||++.+ ..++.++|||||||+||||+++
T Consensus 185 -------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 227 (367)
T 2fst_X 185 -------------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227 (367)
T ss_dssp -------------------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSS
T ss_pred -------------------------------------cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCC
Confidence 0114578999999999987 6789999999999999999986
Q ss_pred --CCcHHHHHHHHHhcccc------------------------CCC-----CCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001366 529 --FDSERALAAAMSDLRDR------------------------ILP-----PSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~------------------------~~p-----~~~~~~~~~~~~li~~lL~~dP~~Rpsa~ 577 (1092)
|.+.....+....+... ..+ ..+...++.+.+||.+||++||.+|||+.
T Consensus 228 ~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~ 307 (367)
T 2fst_X 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307 (367)
T ss_dssp CSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred CCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHH
Confidence 65544333222211100 001 11345678899999999999999999999
Q ss_pred HHhhhhhhhhhhccch
Q 001366 578 EILQSEVTNEFQEVCA 593 (1092)
Q Consensus 578 eiL~~~~~~~~~~~~~ 593 (1092)
|+|+||||.....+..
T Consensus 308 e~L~hp~~~~~~~~~~ 323 (367)
T 2fst_X 308 QALAHAYFAQYHDPDD 323 (367)
T ss_dssp HHHTSGGGTTTCCGGG
T ss_pred HHhcChhhhhccCCCC
Confidence 9999999998765544
No 169
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.97 E-value=1.1e-31 Score=324.11 Aligned_cols=280 Identities=16% Similarity=0.143 Sum_probs=198.5
Q ss_pred cccccccCCcCCccccCcceeeecccCCchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCc-------
Q 001366 183 SANTENDGLSGNMLSHGSIRTKMLSKSGFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP------- 253 (1092)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~------- 253 (1092)
+.+.|+.--.+-.++.+.+..+... .-...|.+.+.++ |.|.||++.... .+..++.|+.......
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~Y~~~~~lG~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~ 82 (504)
T 3q5i_A 8 SSGRENLYFQGIAINPGMYVRKKEG-KIGESYFKVRKLGSGAYGEVLLCKEKN----GHSEKAIKVIKKSQFDKGRYSDD 82 (504)
T ss_dssp --CGGGGSSCCCCCCGGGGCCEECS-CGGGTEEEEEEEEC--CEEEEEEEETT----TCCEEEEEEEEC-----------
T ss_pred ccccccccccceeechhheeeccCC-CcccceEEEeEecccCCeEEEEEEECC----CCcEEEEEEEEhhhccccccccc
Confidence 3444555555555555555443221 1123466665554 789999998632 2455566554322211
Q ss_pred -----hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCH
Q 001366 254 -----SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKR 328 (1092)
Q Consensus 254 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~ 328 (1092)
.......++..++...+||||+.+++........+ ++||||+|++|.+++...+ .+++
T Consensus 83 ~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~----------------lv~e~~~gg~L~~~l~~~~-~~~~ 145 (504)
T 3q5i_A 83 NKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFY----------------LVTEFYEGGELFEQIINRH-KFDE 145 (504)
T ss_dssp -----CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE----------------EEEECCTTCBHHHHHHHHS-CCCH
T ss_pred chhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE----------------EEEecCCCCcHHHHHHHcC-CCCH
Confidence 12234456677788889999999877755433333 3899999999999997664 4788
Q ss_pred HHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC---cEEEecccccccccccccCCCCCCchhhhhccccccccc
Q 001366 329 IECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN---QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMF 405 (1092)
Q Consensus 329 ~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~---~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 405 (1092)
.+++.|++||+.||.|||++||+||||||+|||++..+ .+||+|||+++.....
T Consensus 146 ~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~----------------------- 202 (504)
T 3q5i_A 146 CDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD----------------------- 202 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTT-----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCC-----------------------
Confidence 89999999999999999999999999999999998776 6999999998764310
Q ss_pred cccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCccccccccc
Q 001366 406 TTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQ 485 (1092)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (1092)
T Consensus 203 -------------------------------------------------------------------------------- 202 (504)
T 3q5i_A 203 -------------------------------------------------------------------------------- 202 (504)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHHHHHHhccccC--CCCCCCCCChhHHH
Q 001366 486 STSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRI--LPPSFLSENPKEAG 560 (1092)
Q Consensus 486 ~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~~~~~~~~~~~--~p~~~~~~~~~~~~ 560 (1092)
......+||++|+|||++.+ .++.++|||||||++|+|+++ |.+............... ..+.+...++.+.+
T Consensus 203 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 280 (504)
T 3q5i_A 203 -YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKE 280 (504)
T ss_dssp -SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHH
T ss_pred -CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHH
Confidence 00124579999999999874 699999999999999999985 544433333322222222 12334567899999
Q ss_pred HHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 561 FCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 561 li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
|+.+||++||.+|||+.|+|+||||....
T Consensus 281 li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 309 (504)
T 3q5i_A 281 LIKLMLTYDYNKRCTAEEALNSRWIKKYA 309 (504)
T ss_dssp HHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred HHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence 99999999999999999999999998754
No 170
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.3e-29 Score=284.07 Aligned_cols=288 Identities=14% Similarity=0.129 Sum_probs=240.5
Q ss_pred hhhhccchhhhhhccccccCCCC--cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCC
Q 001366 724 DLLRDRENLFLAQQDQEIQNPTD--RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSK 801 (1092)
Q Consensus 724 ~~l~~~~~~~~~~~~~~~~~~~~--~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~ 801 (1092)
..+.+|.+.+..+.+ +|++ .+++..|+.+++|+....+... .+.+|...|.+++|+|++++|++++.|+
T Consensus 26 ~~l~~h~~~v~~~~~----s~~~~~l~~~~~dg~i~vwd~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~l~s~~~dg 96 (369)
T 3zwl_B 26 IKLTGHERPLTQVKY----NKEGDLLFSCSKDSSASVWYSLNGERLG-----TLDGHTGTIWSIDVDCFTKYCVTGSADY 96 (369)
T ss_dssp EEEECCSSCEEEEEE----CTTSCEEEEEESSSCEEEEETTTCCEEE-----EECCCSSCEEEEEECTTSSEEEEEETTT
T ss_pred EEEEEeeceEEEEEE----cCCCCEEEEEeCCCEEEEEeCCCchhhh-----hhhhcCCcEEEEEEcCCCCEEEEEeCCC
Confidence 446778777766543 4544 3467789999999988765544 3558999999999999999999999999
Q ss_pred cEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECC-----CcEEEEECCCCc-----------eEE
Q 001366 802 KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYD-----GVVKLWDACTGQ-----------TVS 865 (1092)
Q Consensus 802 ~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~D-----gtV~IWD~~tg~-----------~i~ 865 (1092)
+|+|||+... .......+...|.+++|+|+ +.+|++++.+ |.|++||+.++. .+.
T Consensus 97 ~i~iwd~~~~--------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~ 167 (369)
T 3zwl_B 97 SIKLWDVSNG--------QCVATWKSPVPVKRVEFSPC-GNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIH 167 (369)
T ss_dssp EEEEEETTTC--------CEEEEEECSSCEEEEEECTT-SSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSE
T ss_pred eEEEEECCCC--------cEEEEeecCCCeEEEEEccC-CCEEEEecCCccCCCCEEEEEEecCCccceeecccccceee
Confidence 9999998752 12223347889999999998 8999999999 999999987653 344
Q ss_pred EeeccCc--cEEEEEEecCCCCEEEEEeCCCcEEEEecCC-CceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEE
Q 001366 866 HYIEHEK--RAWSVDFSQVHPTKLASGSDDCSVKLWNINE-KNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCY 941 (1092)
Q Consensus 866 ~l~~h~~--~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~-~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vw 941 (1092)
.+..|.. .+.+++|+| ++..|++++.|+.|++||+++ +..+..+. +...|.+++|+|++. +|++++.|+.|++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~ 245 (369)
T 3zwl_B 168 KIITHEGLDAATVAGWST-KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLT-YFITSSRDTNSFLV 245 (369)
T ss_dssp EEECCTTCCCEEEEEECG-GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEE
T ss_pred eccCCcCccceeEEEEcC-CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCC-EEEEecCCceEEEE
Confidence 5556666 899999999 889999999999999999998 67777777 678899999999985 89999999999999
Q ss_pred EcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCC--------------eEEEEEcCCCCCCCCCCCceeEEEcCCC
Q 001366 942 DLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDN--------------KLKLWDLKRTSHTGPSTNACSLTFSGHT 1006 (1092)
Q Consensus 942 Dlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg--------------~I~vWDl~~~~~~~~~~~~~~~~l~~h~ 1006 (1092)
|+++.+. +..+. +...+.+++|+ ++.++++++.++ .|++||+. ....+..+.+|.
T Consensus 246 d~~~~~~-~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~--------~~~~~~~~~~~~ 315 (369)
T 3zwl_B 246 DVSTLQV-LKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI--------FEEEIGRVQGHF 315 (369)
T ss_dssp ETTTCCE-EEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETT--------TCCEEEEEECCS
T ss_pred ECCCCce-eeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC--------CCcchhheeccc
Confidence 9998764 34444 77889999998 777899999888 89999998 456788899999
Q ss_pred CCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCce
Q 001366 1007 NEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPI 1041 (1092)
Q Consensus 1007 ~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i 1041 (1092)
..|++++|+|++++|++|+.||.|+||++..+...
T Consensus 316 ~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 350 (369)
T 3zwl_B 316 GPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFD 350 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHT
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEECccccch
Confidence 99999999999999999999999999998765443
No 171
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.97 E-value=2.4e-32 Score=326.23 Aligned_cols=249 Identities=19% Similarity=0.213 Sum_probs=186.0
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
.|.+.+.++ +.|.||+|... ..+..++.|+....... .......++...+...+||||+.+++........+
T Consensus 17 ~Y~l~~~LG~G~fg~V~~a~~~----~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~ 92 (476)
T 2y94_A 17 HYILGDTLGVGTFGKVKVGKHE----LTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIF 92 (476)
T ss_dssp TEEEEEEEECCSSSCEEEEEET----TTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred CEEEEEEEeeCCCeEEEEEEEC----CCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 355555544 68999999752 23566677665322111 11233456677788889999999877655433333
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
.+||||+|++|.++|...+ .++..+++.++.||+.||+|||++||+||||||+|||++.++.+
T Consensus 93 ----------------lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~v 155 (476)
T 2y94_A 93 ----------------MVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNA 155 (476)
T ss_dssp ----------------EEEECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCE
T ss_pred ----------------EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCe
Confidence 3899999999999997654 47888999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++.....
T Consensus 156 kL~DFG~a~~~~~~------------------------------------------------------------------ 169 (476)
T 2y94_A 156 KIADFGLSNMMSDG------------------------------------------------------------------ 169 (476)
T ss_dssp EECCCSSCEECCTT------------------------------------------------------------------
T ss_pred EEEeccchhhcccc------------------------------------------------------------------
Confidence 99999998764310
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC-CccccchhhhHHHHHHcC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-t~~sDIwSLGvll~ell~ 527 (1092)
......+||++|+|||++.+..+ +.++|||||||+||||++
T Consensus 170 --------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~ellt 211 (476)
T 2y94_A 170 --------------------------------------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLC 211 (476)
T ss_dssp --------------------------------------CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhh
Confidence 00114579999999999998765 789999999999999998
Q ss_pred C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 528 R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 528 ~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
+ |......... ..+..... ......++.+.+||.+||+.||.+|||+.||++||||...
T Consensus 212 G~~Pf~~~~~~~~~-~~i~~~~~-~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 212 GTLPFDDDHVPTLF-KKICDGIF-YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp SSCSSCCSSSHHHH-HHHHTTCC-CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred CCCCCCCCCHHHHH-HHHhcCCc-CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence 6 5443322222 22222221 1122357889999999999999999999999999999864
No 172
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=2.7e-29 Score=290.30 Aligned_cols=328 Identities=16% Similarity=0.152 Sum_probs=229.4
Q ss_pred hhhhccchhhhhhccccccCC-CC--cEEeEcCCeEEEEEcccceEEeeEEe--------eeecCCCCCEEEEEEcC-CC
Q 001366 724 DLLRDRENLFLAQQDQEIQNP-TD--RLGAFFDGLCKYARYSKFEVQGMLRT--------GEFNNSANVICSISFDR-DE 791 (1092)
Q Consensus 724 ~~l~~~~~~~~~~~~~~~~~~-~~--~l~~~~D~~~k~w~~~~~~~~~~l~~--------~~l~~h~~~V~sl~fsp-dg 791 (1092)
.++++|.+.+..+.+ +| ++ .++++.|+.+++|++........+.. ....+|...|.+++|+| ++
T Consensus 37 ~~~~~h~~~v~~~~~----s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 112 (408)
T 4a11_B 37 DVERIHGGGINTLDI----EPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDT 112 (408)
T ss_dssp EECCCCSSCEEEEEE----CTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCT
T ss_pred eeeeccCCcEEEEEE----ecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCC
Confidence 345567766665543 44 33 45778899999999876544333321 11235999999999999 78
Q ss_pred CEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCC--CCEEEEEECCCcEEEEECCCCceEEEeec
Q 001366 792 DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI--KNYLASADYDGVVKLWDACTGQTVSHYIE 869 (1092)
Q Consensus 792 ~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~--~~~LaSgs~DgtV~IWD~~tg~~i~~l~~ 869 (1092)
.+|++|+.|+.|++||+... .......+...+.+++|++.. +.++++++.||.|++||+.+++.+..+.+
T Consensus 113 ~~l~s~~~d~~i~iwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~ 184 (408)
T 4a11_B 113 GMFTSSSFDKTLKVWDTNTL--------QTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG 184 (408)
T ss_dssp TCEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECC
T ss_pred cEEEEEeCCCeEEEeeCCCC--------ccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecC
Confidence 89999999999999998751 122334578889999999862 44999999999999999999999999999
Q ss_pred cCccEEEEEEecCCCC-EEEEEeCCCcEEEEecCCCc-eeeeE----------------ecCCceEEEEEccCCCeEEEE
Q 001366 870 HEKRAWSVDFSQVHPT-KLASGSDDCSVKLWNINEKN-SLATI----------------KNIANVCCVQFSAHSSHLLAF 931 (1092)
Q Consensus 870 h~~~V~sv~fsp~~~~-~laSgs~Dg~I~iWDl~~~~-~l~~l----------------~~~~~V~sl~fsp~~~~~lat 931 (1092)
|...|.+++|+| ++. +|++|+.||.|++||++++. ++..+ .+...|.+++|+|++. +|++
T Consensus 185 ~~~~v~~~~~~~-~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~ 262 (408)
T 4a11_B 185 HRQEILAVSWSP-RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL-HLLT 262 (408)
T ss_dssp CCSCEEEEEECS-SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-EEEE
T ss_pred CCCcEEEEEECC-CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC-EEEE
Confidence 999999999999 555 79999999999999998765 33333 2567899999999985 8999
Q ss_pred EECCCeEEEEEcCCCCcceEEecCC------CCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCC
Q 001366 932 GSADYRTYCYDLRNARAPWCVLAGH------EKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGH 1005 (1092)
Q Consensus 932 gs~Dg~I~vwDlr~~~~~~~~l~~H------~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h 1005 (1092)
++.|+.|++||+++++.... ..++ ......+.......+++++.|+.|++||+. .+.++..+.+|
T Consensus 263 ~~~dg~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~--------~~~~~~~~~~~ 333 (408)
T 4a11_B 263 VGTDNRMRLWNSSNGENTLV-NYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVY--------SGEQITMLKGH 333 (408)
T ss_dssp EETTSCEEEEETTTCCBCCC-CCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETT--------TCCEEEEECCC
T ss_pred ecCCCeEEEEECCCCcccee-ccccccccccccceeEEecCCCceEEEEecCCEEEEEECc--------CCcceeeeccC
Confidence 99999999999998764321 1111 111222222356678888899999999998 45678899999
Q ss_pred CCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeC-CCCEEEEEecCC
Q 001366 1006 TNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRR-RSDMVVAANSSG 1084 (1092)
Q Consensus 1006 ~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~sp-d~~~Lasgs~DG 1084 (1092)
...|++++|+|++.+|++|+.||.|++|++..++++...... -....+.+ ....+.+++.++
T Consensus 334 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~ 396 (408)
T 4a11_B 334 YKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDET-----------------TTKSQLNPAFEDAWSSSDEEG 396 (408)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEEECC------------------------------------------------
T ss_pred CCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCce-----------------EeccccccccceeecccCccC
Confidence 999999999999999999999999999999988776544310 11122233 344556778899
Q ss_pred eEEEEEc
Q 001366 1085 CIKVLQM 1091 (1092)
Q Consensus 1085 ~V~vW~l 1091 (1092)
.+++|+.
T Consensus 397 ~~~~W~~ 403 (408)
T 4a11_B 397 GTSAWSH 403 (408)
T ss_dssp -------
T ss_pred ceeecCC
Confidence 9999974
No 173
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.97 E-value=8.8e-32 Score=298.75 Aligned_cols=246 Identities=15% Similarity=0.090 Sum_probs=177.6
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccc-cCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTT-TMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 288 (1092)
+|.+.+.+ ++.|.||++... ..+..++.|+.... ..........++...+... .|||++.++.....+...+
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 12 EFHELEKIGSGEFGSVFKCVKR----LDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HEEEEEEEEEETTEEEEEEEET----TTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred hhhhhhhhcCCCceEEEEEEEc----CCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 44444444 378999999763 22455666655332 2233344455555556666 9999998877655433333
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS 365 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~---~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~ 365 (1092)
++|||++|++|.+++... ...++..+++.|+.||+.||+|||++||+||||||+||+++.+
T Consensus 88 ----------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~ 151 (289)
T 1x8b_A 88 ----------------IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRT 151 (289)
T ss_dssp ----------------EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--
T ss_pred ----------------EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCC
Confidence 389999999999999654 2457888999999999999999999999999999999999855
Q ss_pred C-------------------cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccc
Q 001366 366 N-------------------QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRW 426 (1092)
Q Consensus 366 ~-------------------~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (1092)
+ .+|++|||+++.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------------------------------------------- 187 (289)
T 1x8b_A 152 SIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP-------------------------------------------- 187 (289)
T ss_dssp ------------------CCCEEECCCTTCEETTCS--------------------------------------------
T ss_pred CCCcccccccccccccCCceEEEEcccccccccCCc--------------------------------------------
Confidence 4 6788888876553210
Q ss_pred cccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC
Q 001366 427 WSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG 506 (1092)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~ 506 (1092)
....||+.|+|||++.+
T Consensus 188 ---------------------------------------------------------------~~~~gt~~y~aPE~~~~ 204 (289)
T 1x8b_A 188 ---------------------------------------------------------------QVEEGDSRFLANEVLQE 204 (289)
T ss_dssp ---------------------------------------------------------------CCCCCCGGGCCHHHHTT
T ss_pred ---------------------------------------------------------------cccCCCccccChhHhcC
Confidence 02348899999999987
Q ss_pred C-CCCccccchhhhHHHHHHcCCC--CcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 507 G-VCTTSSNIYSLGVLFFELFGRF--DSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 507 ~-~~t~~sDIwSLGvll~ell~~f--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
. .++.++|||||||++|||+++. ....... ..+.....+......++.+.+|+.+||++||.+|||+.++|+||
T Consensus 205 ~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 281 (289)
T 1x8b_A 205 NYTHLPKADIFALALTVVCAAGAEPLPRNGDQW---HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHS 281 (289)
T ss_dssp CCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH---HHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred CCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH---HHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence 5 6678999999999999999862 2222221 22233334444445688999999999999999999999999999
Q ss_pred hhhhh
Q 001366 584 VTNEF 588 (1092)
Q Consensus 584 ~~~~~ 588 (1092)
||...
T Consensus 282 ~~~~~ 286 (289)
T 1x8b_A 282 VLLSA 286 (289)
T ss_dssp TC---
T ss_pred Hhhhh
Confidence 99764
No 174
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.97 E-value=4.8e-32 Score=306.25 Aligned_cols=252 Identities=13% Similarity=0.127 Sum_probs=175.5
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhcc-CCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVAS-NASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..++.|.||++... ..+..++.|++..... .......++...+.. .+|||++.+++....+...+
T Consensus 22 g~G~~g~V~~~~~~----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~--------- 87 (316)
T 2ac3_A 22 GEGAHARVQTCINL----ITSQEYAVKIIEKQPG-HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY--------- 87 (316)
T ss_dssp CCCSSEEEEEEECS----SSCCEEEEEEEECCSS-CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE---------
T ss_pred cCCceEEEEEEEEc----CCCcEEEEEEEeeCcc-hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE---------
Confidence 44578999999752 2255667766533322 223344455555555 58999998877655433333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc---EEEeccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ---VKYIGPI 374 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~---vkl~Dfg 374 (1092)
++|||++|++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+|||++.++. +||+|||
T Consensus 88 -------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 159 (316)
T 2ac3_A 88 -------LVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFD 159 (316)
T ss_dssp -------EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTT
T ss_pred -------EEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEcc
Confidence 3899999999999997764 4778799999999999999999999999999999999998776 9999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++........
T Consensus 160 ~~~~~~~~~~~--------------------------------------------------------------------- 170 (316)
T 2ac3_A 160 LGSGIKLNGDC--------------------------------------------------------------------- 170 (316)
T ss_dssp CCC-----------------------------------------------------------------------------
T ss_pred CccccccCCcc---------------------------------------------------------------------
Confidence 98764311000
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-----CCCCccccchhhhHHHHHHcCC-
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----GVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----~~~t~~sDIwSLGvll~ell~~- 528 (1092)
...........+||+.|+|||++.+ ..++.++|||||||+||||+++
T Consensus 171 ---------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~ 223 (316)
T 2ac3_A 171 ---------------------------SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGY 223 (316)
T ss_dssp --------------------------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSS
T ss_pred ---------------------------ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCC
Confidence 0000111224579999999999975 5689999999999999999986
Q ss_pred --CCcHH--------------HHHHHHHhccccC--CC-CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 529 --FDSER--------------ALAAAMSDLRDRI--LP-PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 529 --f~~~~--------------~~~~~~~~~~~~~--~p-~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|.... ........+.... +| +.+...++.+.+|+.+||++||.+|||+.|+|+||||...
T Consensus 224 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~ 302 (316)
T 2ac3_A 224 PPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC 302 (316)
T ss_dssp CSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC--
T ss_pred CCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCC
Confidence 43211 0111222222221 12 1234567889999999999999999999999999999864
No 175
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.97 E-value=1.2e-31 Score=297.14 Aligned_cols=251 Identities=17% Similarity=0.192 Sum_probs=185.2
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||++.... .+..++.|+..... ........++..++...+|||++.++.....+...+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~----~~~~~a~k~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~--- 82 (277)
T 3f3z_A 11 YTLENTIGRGSWGEVKIAVQKG----TRIRRAAKKIPKYF-VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIY--- 82 (277)
T ss_dssp EEEEEEEEEETTEEEEEEEETT----TCCEEEEEEEEGGG-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE---
T ss_pred EEeeeEEeecCCEEEEEEEeCC----CCcEEEEEeehhhc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEE---
Confidence 4454444 4789999997632 23344444432221 122344556677788889999998877654333222
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE---ccCCcE
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL---LQSNQV 368 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill---~~~~~v 368 (1092)
++|||++|++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+||++ +.++.+
T Consensus 83 -------------lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~ 148 (277)
T 3f3z_A 83 -------------LVMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPL 148 (277)
T ss_dssp -------------EEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCE
T ss_pred -------------EEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcE
Confidence 3899999999999997754 47788999999999999999999999999999999999 788999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
|++|||+++.....
T Consensus 149 ~l~Dfg~~~~~~~~------------------------------------------------------------------ 162 (277)
T 3f3z_A 149 KLIDFGLAARFKPG------------------------------------------------------------------ 162 (277)
T ss_dssp EECCCTTCEECCTT------------------------------------------------------------------
T ss_pred EEEecccceeccCc------------------------------------------------------------------
Confidence 99999988664310
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~ 528 (1092)
.......||+.|+|||.+.+ .++.++|||||||++|||+++
T Consensus 163 --------------------------------------~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g 203 (277)
T 3f3z_A 163 --------------------------------------KMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCG 203 (277)
T ss_dssp --------------------------------------SCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHS
T ss_pred --------------------------------------cchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHC
Confidence 00114468999999999876 489999999999999999985
Q ss_pred ---CCcHHHHHHHHHhccccCCCC--CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhcc
Q 001366 529 ---FDSERALAAAMSDLRDRILPP--SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEV 591 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~~ 591 (1092)
|..................++ .+...++.+.+|+.+||++||.+|||+.++|+||||.+....
T Consensus 204 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 271 (277)
T 3f3z_A 204 YPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSS 271 (277)
T ss_dssp SCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhccccc
Confidence 544333333333333222222 234568899999999999999999999999999999875443
No 176
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.97 E-value=1.1e-31 Score=300.45 Aligned_cols=276 Identities=21% Similarity=0.223 Sum_probs=186.4
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC-
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL- 289 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 289 (1092)
.|.+.+.+ +|.|.||++... ..+..++.|++.. .........++..++...+|||++.++...........
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 7 DFEEIAVLGQGAFGQVVKARNA----LDSRYYAIKKIRH--TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HEEEEEEEEECSSEEEEEEEET----TTCCEEEEEEEEE--EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred cchhhheeccCCcEEEEEEEEc----CCCeEEEEEEEec--cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 34444444 478999999752 1245556665522 12223344566777888899999987665443211100
Q ss_pred -CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 290 -GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 290 -~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
.....- .....+|||++|++|.+++...+..++..+++.++.||+.||+|||++||+||||||+||+++.++.+
T Consensus 81 ~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~ 155 (303)
T 1zy4_A 81 MTAVKKK-----STLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNV 155 (303)
T ss_dssp -----CE-----EEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCE
T ss_pred hcccccC-----CceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCE
Confidence 000000 01224899999999999998776677888999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
|++|||+++............
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~----------------------------------------------------------- 176 (303)
T 1zy4_A 156 KIGDFGLAKNVHRSLDILKLD----------------------------------------------------------- 176 (303)
T ss_dssp EECCCCCCSCTTC-------------------------------------------------------------------
T ss_pred EEeeCcchhhcccccchhccc-----------------------------------------------------------
Confidence 999999987654211000000
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHcC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell~ 527 (1092)
+..............||+.|+|||.+.+. .++.++|||||||++|||++
T Consensus 177 ------------------------------~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 177 ------------------------------SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226 (303)
T ss_dssp -----------------------------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred ------------------------------cccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence 00000001122356799999999999874 68999999999999999999
Q ss_pred CCCcHHHHHHHHHhcccc--CCCCCCC-CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 528 RFDSERALAAAMSDLRDR--ILPPSFL-SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 528 ~f~~~~~~~~~~~~~~~~--~~p~~~~-~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
+|............+... .+|+.+. ..++.+.+|+.+||++||.+|||+.++|+||||...
T Consensus 227 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 227 PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred ccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 987665555544444332 2344433 345668899999999999999999999999999653
No 177
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.8e-31 Score=316.50 Aligned_cols=260 Identities=13% Similarity=0.122 Sum_probs=202.1
Q ss_pred CCCCCEEEEEEcCCC---------CEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEE
Q 001366 777 NSANVICSISFDRDE---------DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASA 847 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg---------~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSg 847 (1092)
.+...|.+|+|+|++ ++||+|+.++.. . .++|+ +..|+++
T Consensus 131 ~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~------~------------------------~~~~~-~~~laS~ 179 (524)
T 2j04_B 131 NVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD------E------------------------PLNEH-LEMFDKE 179 (524)
T ss_dssp ECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC-----------------------------------------------
T ss_pred ECCCceeEEEecccCCCCccCcCCeEEEEEEecccC------C------------------------ccchh-hhhhccC
Confidence 357899999999987 799999866420 0 12465 7889999
Q ss_pred ECCCcEEEEECCCCce----EEEeeccCccEEEEEEecC-----CCCEEEEEeCCCcEEEEecCCCcee-----------
Q 001366 848 DYDGVVKLWDACTGQT----VSHYIEHEKRAWSVDFSQV-----HPTKLASGSDDCSVKLWNINEKNSL----------- 907 (1092)
Q Consensus 848 s~DgtV~IWD~~tg~~----i~~l~~h~~~V~sv~fsp~-----~~~~laSgs~Dg~I~iWDl~~~~~l----------- 907 (1092)
+.|++|+|||+.+++. ...+..|...|++|+|+|. ++.+||+|+.||+|+|||+.++...
T Consensus 180 s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~ 259 (524)
T 2j04_B 180 KHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPS 259 (524)
T ss_dssp --CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCS
T ss_pred CCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCce
Confidence 9999999999988764 2346678889999999993 2579999999999999999876432
Q ss_pred eeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEE--EEcC-C-CEEEEEECCCeEEE
Q 001366 908 ATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYV--KFLD-S-GTLVTASTDNKLKL 982 (1092)
Q Consensus 908 ~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v--~fs~-~-~~L~Sgs~Dg~I~v 982 (1092)
.++. +...|++++|+|++ .|++|+.||+|++||++++..+...+.+|...|.+| .|++ + .+|+|||.|++|+|
T Consensus 260 ~~l~~h~~~v~sv~~s~~~--~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvkl 337 (524)
T 2j04_B 260 LTLSLADSLITTFDFLSPT--TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYI 337 (524)
T ss_dssp EEECCTTTCEEEEEESSSS--EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEE
T ss_pred EEEEcCCCCEEEEEecCCC--eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEE
Confidence 2444 56789999999864 799999999999999998766677789999999999 4564 4 68999999999999
Q ss_pred EEcCCCCCCCCCCCceeEEEcCCCC--CeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCC
Q 001366 983 WDLKRTSHTGPSTNACSLTFSGHTN--EKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDD 1060 (1092)
Q Consensus 983 WDl~~~~~~~~~~~~~~~~l~~h~~--~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~ 1060 (1092)
||++ ...+..++.+|.. .|++++|+|++..+++++.|++|++||+..+..+..+ .+
T Consensus 338 WD~~--------~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l--------------~g 395 (524)
T 2j04_B 338 FNPK--------DIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPL--------------VS 395 (524)
T ss_dssp ECGG--------GHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEE--------------EE
T ss_pred EECC--------CCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceee--------------ec
Confidence 9998 3455566667654 4789999999999999999999999998877655433 35
Q ss_pred CCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1061 NGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1061 h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
|...|++|+|+|++++|++|+.||.|+||++
T Consensus 396 H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 396 RETTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp CSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred CCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 7889999999999999999999999999985
No 178
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.97 E-value=5.7e-32 Score=336.80 Aligned_cols=252 Identities=16% Similarity=0.168 Sum_probs=187.8
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCcccccccccccccccccc--CchhhHhhhhhhhhhccC-CCCCCCccccceecCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTT--MPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNG 285 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 285 (1092)
...|.+.+.++ |.|.||++.... .++.+|.|+..... ..........+..++... .||+++.++.......
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~----~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~ 415 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKG----TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD 415 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESS----SCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS
T ss_pred ccceEEEEEEccCCCEEEEEEEECC----CCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC
Confidence 34455555554 789999998632 35556666653211 111222333444444443 7888887766544333
Q ss_pred CCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC
Q 001366 286 SLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS 365 (1092)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~ 365 (1092)
..+ ++|||++||+|.++|...+ .+++.+++.|+.||+.||+|||++||+||||||+||||+.+
T Consensus 416 ~~~----------------lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~ 478 (674)
T 3pfq_A 416 RLY----------------FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE 478 (674)
T ss_dssp EEE----------------EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSS
T ss_pred EEE----------------EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCC
Confidence 333 3899999999999998765 47787999999999999999999999999999999999999
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+.+||+|||+++......
T Consensus 479 g~ikL~DFGla~~~~~~~-------------------------------------------------------------- 496 (674)
T 3pfq_A 479 GHIKIADFGMCKENIWDG-------------------------------------------------------------- 496 (674)
T ss_dssp SCEEECCCTTCEECCCTT--------------------------------------------------------------
T ss_pred CcEEEeecceeeccccCC--------------------------------------------------------------
Confidence 999999999987533100
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL 525 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~el 525 (1092)
......+||++|+|||++.+..|+.++|||||||+||||
T Consensus 497 -----------------------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyel 535 (674)
T 3pfq_A 497 -----------------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 535 (674)
T ss_dssp -----------------------------------------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHH
Confidence 001256899999999999999999999999999999999
Q ss_pred cCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCH-----HHHhhhhhhhhh
Q 001366 526 FGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTT-----REILQSEVTNEF 588 (1092)
Q Consensus 526 l~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa-----~eiL~~~~~~~~ 588 (1092)
+++ |.+..........+......| ...++++.+||.+||.+||.+||++ +||++||||...
T Consensus 536 ltG~~Pf~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i 604 (674)
T 3pfq_A 536 LAGQAPFEGEDEDELFQSIMEHNVAYP--KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 604 (674)
T ss_dssp HHSSCSSCCSSHHHHHHHHHSSCCCCC--TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred HcCCCCCCCCCHHHHHHHHHhCCCCCC--ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence 985 655544444444444333222 2458899999999999999999998 999999999864
No 179
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.97 E-value=7.1e-32 Score=298.75 Aligned_cols=250 Identities=19% Similarity=0.193 Sum_probs=169.5
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
+..|.+.+.++ |.|.||++.... .+..++.|++...... .......++...+...+|||++.+++.......
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 87 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTT----TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDE 87 (275)
T ss_dssp CCCBCCCC---------EEEEECTT----TCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred ccceEEEEEEEcCCCEEEEEEEECC----CCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCe
Confidence 34566655554 789999996522 2456666665332211 112344466677888899999988776543332
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
.+ .+|||+ +++|.+++...+ .++..+++.++.||+.||.|||++||+||||||+||+++.++
T Consensus 88 ~~----------------lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~ 149 (275)
T 2eue_A 88 II----------------MVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHL 149 (275)
T ss_dssp EE----------------EEEECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTS
T ss_pred EE----------------EEehhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCC
Confidence 22 378998 788999887654 478889999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+|++|||+++......
T Consensus 150 ~~kl~Dfg~~~~~~~~~--------------------------------------------------------------- 166 (275)
T 2eue_A 150 NVKIADFGLSNIMTDGN--------------------------------------------------------------- 166 (275)
T ss_dssp CEEECCSSCC----------------------------------------------------------------------
T ss_pred CEEEeecccceeccCcc---------------------------------------------------------------
Confidence 99999999886543100
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC-CccccchhhhHHHHHH
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIYSLGVLFFEL 525 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-t~~sDIwSLGvll~el 525 (1092)
......||+.|+|||.+.+..+ +.++|||||||++|||
T Consensus 167 -----------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l 205 (275)
T 2eue_A 167 -----------------------------------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM 205 (275)
T ss_dssp -------------------------------------------------CTTCCHHHHCC-----THHHHHHHHHHHHHH
T ss_pred -----------------------------------------cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHH
Confidence 0113468999999999988765 7899999999999999
Q ss_pred cCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 526 FGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 526 l~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
+++ |................. +.....++.+.+|+.+||++||.+|||+.|+|+||||...
T Consensus 206 ~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~~ 269 (275)
T 2eue_A 206 LCRRLPFDDESIPVLFKNISNGVY--TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHTCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred HhCCCCCCCCCHHHHHHHHHhCCC--CCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCeeccc
Confidence 985 544333222222222211 1223357889999999999999999999999999999863
No 180
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=3.9e-29 Score=287.61 Aligned_cols=288 Identities=14% Similarity=0.182 Sum_probs=216.4
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEE-EEEECCCcE
Q 001366 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYL-ASADYDGVV 853 (1092)
Q Consensus 775 l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~L-aSgs~DgtV 853 (1092)
+.+|...|++++|+|||++||+|+.+ .++||++... .. ... .+...+..++|.++ ++.+ ++++.|++|
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~-------~~-~~~-~~~~~~~~~~~~~~-~~~~~~~~~~d~~v 83 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLK-SFEIYNVHPV-------AH-IMS-QEMRHLSKVRMLHR-TNYVAFVTGVKEVV 83 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSS-EEEEEEETTE-------EE-EEE-EECSCCCEEEECTT-SSEEEEECSSTTEE
T ss_pred cccCCCceEEEEECCCCCEEEEEcCC-EEEEEecCCc-------ce-eee-eecCCeEEEEEcCC-CCEEEEEECCccEE
Confidence 46799999999999999999999866 5889997641 11 111 11235788888887 4555 678888999
Q ss_pred EEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCC-ceeeeEecCCceEEEEEccCCCeEEEE-
Q 001366 854 KLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEK-NSLATIKNIANVCCVQFSAHSSHLLAF- 931 (1092)
Q Consensus 854 ~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~-~~l~~l~~~~~V~sl~fsp~~~~~lat- 931 (1092)
+|||+.+++.+..+. |...|.+++|++ + .++++ .|+.|++||+.++ +.+.++.. ....+++++ . ++++
T Consensus 84 ~iWd~~~~~~~~~~~-~~~~v~~v~~~~-~--~~~~~-~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~--~-~la~~ 153 (355)
T 3vu4_A 84 HIWDDVKKQDVSRIK-VDAPVKDLFLSR-E--FIVVS-YGDVISVFKFGNPWKRITDDIR--FGGVCEFSN--G-LLVYS 153 (355)
T ss_dssp EEEETTTTEEEEEEE-CSSCEEEEEECS-S--EEEEE-ETTEEEEEESSTTCCBSSCCEE--EEEEEEEET--T-EEEEE
T ss_pred EEEECCCCcEEEEEE-CCCceEEEEEcC-C--EEEEE-EcCEEEEEECCCCceeeEEecc--CCceEEEEc--c-EEEEe
Confidence 999999999998887 677899999987 3 45444 4789999999988 77777766 444556666 3 4555
Q ss_pred -EECCCeEEEEEcCCCC--------------cc-eEEecCCCCCeEEEEEc-CCCEEEEEECCCe-EEEEEcCCCCCCCC
Q 001366 932 -GSADYRTYCYDLRNAR--------------AP-WCVLAGHEKAVSYVKFL-DSGTLVTASTDNK-LKLWDLKRTSHTGP 993 (1092)
Q Consensus 932 -gs~Dg~I~vwDlr~~~--------------~~-~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~-I~vWDl~~~~~~~~ 993 (1092)
|+.||.|++||+++.. .+ +..+.+|...|.+++|+ ++.+|++|+.|++ |+|||++
T Consensus 154 sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~------- 226 (355)
T 3vu4_A 154 NEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTE------- 226 (355)
T ss_dssp ESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETT-------
T ss_pred CCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECC-------
Confidence 6899999999999754 12 67889999999999999 6778999999998 9999998
Q ss_pred CCCceeEEEc-C-CCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeecccc------CC---CCCccccCCCC
Q 001366 994 STNACSLTFS-G-HTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSI------DP---ISGKETDDDNG 1062 (1092)
Q Consensus 994 ~~~~~~~~l~-~-h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~------~~---i~~~~~~~~h~ 1062 (1092)
.+.++.++. + |...|++++|+|+|.+|++|+.|++|+|||+..+.......+... .. .........+.
T Consensus 227 -~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (355)
T 3vu4_A 227 -DGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKH 305 (355)
T ss_dssp -TCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTT
T ss_pred -CCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCC
Confidence 456788887 5 999999999999999999999999999999876543222221110 00 00000111222
Q ss_pred CCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1063 LFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1063 ~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.....++|++++..|++++.||.+++|++
T Consensus 306 ~~~~~~a~~~d~~~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 306 VRGCKIAWISESSLVVVWPHTRMIETFKV 334 (355)
T ss_dssp CCCCEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred CCceEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 33467999999999999999999999986
No 181
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.97 E-value=5.9e-32 Score=309.08 Aligned_cols=245 Identities=16% Similarity=0.144 Sum_probs=179.3
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCch-------hhHhhhhhhhhhccCCCCCCCccccceecC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-------DAALKAAGAMMVASNASPKPVGVGTAVVSN 284 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (1092)
|.+.+.+ +|.|.||++... ..+..++.|+........ ......++..++...+||||+.+++.....
T Consensus 26 y~~~~~lG~G~~g~Vy~a~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 26 YSTMSPLGSGAFGFVWTAVDK----EKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp EEEEEECSSSSSCSEEEEEET----TTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred eEEEeEEEecCCEEEEEEEEC----CCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4444444 478999999642 124556665543322111 122334466677888999999887765433
Q ss_pred CCCCCCccCCCCCccccCCCcccccCCCC-CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc
Q 001366 285 GSLDLGARTGVPASCWIGGLRQGSSDHGV-NLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL 363 (1092)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gg-sL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~ 363 (1092)
...+ .+|||+.+| +|.+++...+ .++..+++.|+.||+.||+|||++||+||||||+|||++
T Consensus 102 ~~~~----------------lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~ 164 (335)
T 3dls_A 102 GFFQ----------------LVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA 164 (335)
T ss_dssp SEEE----------------EEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred CEEE----------------EEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEc
Confidence 3222 379988665 9999997764 477889999999999999999999999999999999999
Q ss_pred cCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCc
Q 001366 364 QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANE 443 (1092)
Q Consensus 364 ~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1092)
.++.+||+|||+++.....
T Consensus 165 ~~~~~kL~Dfg~a~~~~~~------------------------------------------------------------- 183 (335)
T 3dls_A 165 EDFTIKLIDFGSAAYLERG------------------------------------------------------------- 183 (335)
T ss_dssp TTSCEEECCCTTCEECCTT-------------------------------------------------------------
T ss_pred CCCcEEEeecccceECCCC-------------------------------------------------------------
Confidence 9999999999998764310
Q ss_pred cccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC-CccccchhhhHHH
Q 001366 444 SDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIYSLGVLF 522 (1092)
Q Consensus 444 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-t~~sDIwSLGvll 522 (1092)
......+||+.|+|||++.+..+ +.++|||||||++
T Consensus 184 -------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il 220 (335)
T 3dls_A 184 -------------------------------------------KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTL 220 (335)
T ss_dssp -------------------------------------------CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHH
T ss_pred -------------------------------------------CceeccCCCccccChhhhcCCCCCCCcccchhHHHHH
Confidence 00114578999999999998776 8899999999999
Q ss_pred HHHcCCCCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 523 FELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 523 ~ell~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|||+++..+..... ........+ ....++.+.+|+.+||++||.+|||+.++|+||||...
T Consensus 221 ~el~~g~~pf~~~~---~~~~~~~~~--~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~ 281 (335)
T 3dls_A 221 YTLVFEENPFCELE---ETVEAAIHP--PYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP 281 (335)
T ss_dssp HHHHHSSCSCSSGG---GGTTTCCCC--SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred HHHHhCCCchhhHH---HHHhhccCC--CcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence 99998632221111 111111222 22357889999999999999999999999999999864
No 182
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=2.1e-29 Score=297.27 Aligned_cols=262 Identities=19% Similarity=0.243 Sum_probs=213.1
Q ss_pred eeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCC----------CceEEEeeccCccEEEEEEecCCCC-EEEEE
Q 001366 822 AVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACT----------GQTVSHYIEHEKRAWSVDFSQVHPT-KLASG 890 (1092)
Q Consensus 822 ~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~t----------g~~i~~l~~h~~~V~sv~fsp~~~~-~laSg 890 (1092)
.....|.+.|++++|+|+++.+|++++.||.|++||+.+ .+.+..+.+|...|++++|+| ++. +|++|
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~s~ 200 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNP-NLNGYLLSA 200 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECT-TSTTEEEEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCC-CCCCeEEEE
Confidence 345678999999999997578999999999999999986 567888899999999999999 555 99999
Q ss_pred eCCCcEEEEecCCCce-------eeeE-ecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCC--cceEEecCCCCCe
Q 001366 891 SDDCSVKLWNINEKNS-------LATI-KNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNAR--APWCVLAGHEKAV 960 (1092)
Q Consensus 891 s~Dg~I~iWDl~~~~~-------l~~l-~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~--~~~~~l~~H~~~V 960 (1092)
+.||+|++||+.++.. ...+ .|...|.+++|+|++..+|++++.|+.|++||+++.. .++..+..|...|
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 9999999999987432 2333 3677899999999666799999999999999999863 4567778999999
Q ss_pred EEEEEcC-CC-EEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCC-EEEEEecCCcEEEEeCCC
Q 001366 961 SYVKFLD-SG-TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADG-YIACGSESNEVYAYHRSL 1037 (1092)
Q Consensus 961 ~~v~fs~-~~-~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~-~lasgs~Dg~I~Iwd~~~ 1037 (1092)
++++|++ +. .|++|+.||+|++||++.. ..++..+.+|...|++++|+|++. +|++|+.|+.|+|||+..
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~-------~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNL-------KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCT-------TSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCC-------CCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 9999994 44 6889999999999999842 346788889999999999999985 799999999999999876
Q ss_pred CCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCC-EEEEEecCCeEEEEEc
Q 001366 1038 PMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSD-MVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1038 ~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~-~Lasgs~DG~V~vW~l 1091 (1092)
.............+........+|...|++++|+|++. +|++++.||.|+||++
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 354 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp TTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 32111000000000011123357888999999999999 9999999999999986
No 183
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.97 E-value=1.2e-31 Score=308.09 Aligned_cols=241 Identities=13% Similarity=0.075 Sum_probs=181.5
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchh--hHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD--AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|.||++... ..+..++.|++........ .....++..++...+|||++.++.....+...+
T Consensus 64 ~G~~g~Vy~a~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~--------- 130 (348)
T 1u5q_A 64 HGSFGAVYFARDV----RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAW--------- 130 (348)
T ss_dssp ECSSEEEEEEEET----TTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE---------
T ss_pred cCCCEEEEEEEEc----cCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEE---------
Confidence 3478999999742 1245566665533222222 233456777788889999998776655433332
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++|||+. |+|.+++......++..+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus 131 -------lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 202 (348)
T 1u5q_A 131 -------LVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS 202 (348)
T ss_dssp -------EEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCB
T ss_pred -------EEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCce
Confidence 3899998 58999987666678888999999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
....
T Consensus 203 ~~~~---------------------------------------------------------------------------- 206 (348)
T 1u5q_A 203 IMAP---------------------------------------------------------------------------- 206 (348)
T ss_dssp SSSS----------------------------------------------------------------------------
T ss_pred ecCC----------------------------------------------------------------------------
Confidence 5320
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc---CCCCCccccchhhhHHHHHHcCC---CCc
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS---GGVCTTSSNIYSLGVLFFELFGR---FDS 531 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~t~~sDIwSLGvll~ell~~---f~~ 531 (1092)
....+||++|+|||++. +..++.++|||||||+||||+++ |..
T Consensus 207 -------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 255 (348)
T 1u5q_A 207 -------------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 255 (348)
T ss_dssp -------------------------------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred -------------------------------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 01346899999999985 46789999999999999999986 433
Q ss_pred HHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 532 ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 532 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
................+......++.+.+|+.+||++||.+|||+.++|+||||...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~ 312 (348)
T 1u5q_A 256 MNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 312 (348)
T ss_dssp SCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred CChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence 333333333333222222233457889999999999999999999999999999764
No 184
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.97 E-value=2.1e-31 Score=315.34 Aligned_cols=282 Identities=15% Similarity=0.139 Sum_probs=184.8
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccc-cCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTT-TMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.++ +.|+||++... ..+..++.|+.... ..........++.+++...+||||+.+++.........
T Consensus 28 y~~~~~lG~G~~g~V~~a~~~----~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~-- 101 (432)
T 3n9x_A 28 YIIKHLIGRGSYGYVYLAYDK----NTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLK-- 101 (432)
T ss_dssp EEEEEEEEEETTEEEEEEEET----TTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT--
T ss_pred EEEEEEEeecCCEEEEEEEEC----CCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCc--
Confidence 55555444 78999999752 23455666655322 22233455667888899999999998877654332111
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
. ....++|||++| +|.++++..+ .++..+++.|++||+.||.|||++||+||||||+||||+.++.+||
T Consensus 102 ----~-----~~~~lv~e~~~~-~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL 170 (432)
T 3n9x_A 102 ----F-----DELYIVLEIADS-DLKKLFKTPI-FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKV 170 (432)
T ss_dssp ----C-----CCEEEEEECCSE-EHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEE
T ss_pred ----C-----CeEEEEEecCCc-CHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEE
Confidence 0 011247888875 9999997654 5788899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++............ ++.
T Consensus 171 ~DFGla~~~~~~~~~~~~~----------------------------------------------------------~~~ 192 (432)
T 3n9x_A 171 CDFGLARTINSEKDTNIVN----------------------------------------------------------DLE 192 (432)
T ss_dssp CCCTTCEEC-----------------------------------------------------------------------
T ss_pred ccCCCcccccccccccccc----------------------------------------------------------ccc
Confidence 9999998765221100000 000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccc-cCCCCCccccchhhhHHHHHHcCC-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL-SGGVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l-~~~~~t~~sDIwSLGvll~ell~~- 528 (1092)
. + +. ...........++..+||+||+|||++ .+..++.++|||||||+||||+++
T Consensus 193 ~----~---~~----------------~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~ 249 (432)
T 3n9x_A 193 E----N---EE----------------PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNML 249 (432)
T ss_dssp -----------------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTC
T ss_pred c----c---cc----------------ccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcc
Confidence 0 0 00 000000111234578999999999986 456799999999999999999962
Q ss_pred -------------CCcHH-----------------HHHHH---HH-----------------------hccccCC---CC
Q 001366 529 -------------FDSER-----------------ALAAA---MS-----------------------DLRDRIL---PP 549 (1092)
Q Consensus 529 -------------f~~~~-----------------~~~~~---~~-----------------------~~~~~~~---p~ 549 (1092)
|++.. ...+. +. .+..... ..
T Consensus 250 ~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (432)
T 3n9x_A 250 QSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQ 329 (432)
T ss_dssp TTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHH
T ss_pred cccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHH
Confidence 22210 01111 00 0000000 01
Q ss_pred CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhccch
Q 001366 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVCA 593 (1092)
Q Consensus 550 ~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~~~~ 593 (1092)
.++..++.+.+||.+||++||.+|||+.|+|+||||........
T Consensus 330 ~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~ 373 (432)
T 3n9x_A 330 KYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKL 373 (432)
T ss_dssp HSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTTT
T ss_pred HCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCccc
Confidence 13456889999999999999999999999999999998765443
No 185
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.97 E-value=1.4e-31 Score=308.68 Aligned_cols=249 Identities=16% Similarity=0.157 Sum_probs=184.0
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ ++.|.||++... ..+..++.|+..............++..++...+|||++.++.....+...+
T Consensus 35 y~~~~~lg~G~~g~V~~~~~~----~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--- 107 (360)
T 3eqc_A 35 FEKISELGAGNGGVVFKVSHK----PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS--- 107 (360)
T ss_dssp EEEEEEEEECSSCEEEEEEET----TTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEE---
T ss_pred ceeeeeecCCCCeEEEEEEEC----CCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEE---
Confidence 4444444 478999999863 2245566666543322333345567777888889999999877655443333
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhc-CccccCCCCCCeEEccCCcEEE
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~-gIvHrDLKP~Nill~~~~~vkl 370 (1092)
++|||++|++|.++++..+ .++...+..++.||+.||.|||++ ||+||||||+||+++.++.+||
T Consensus 108 -------------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl 173 (360)
T 3eqc_A 108 -------------ICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL 173 (360)
T ss_dssp -------------EEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEE
T ss_pred -------------EEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEE
Confidence 3899999999999997765 477779999999999999999996 9999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++......
T Consensus 174 ~Dfg~~~~~~~~~------------------------------------------------------------------- 186 (360)
T 3eqc_A 174 CDFGVSGQLIDSM------------------------------------------------------------------- 186 (360)
T ss_dssp CCCCCCHHHHHHC-------------------------------------------------------------------
T ss_pred EECCCCccccccc-------------------------------------------------------------------
Confidence 9999886543100
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC--
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR-- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~-- 528 (1092)
.....||+.|+|||++.+..++.++|||||||++|||+++
T Consensus 187 --------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~ 228 (360)
T 3eqc_A 187 --------------------------------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 228 (360)
T ss_dssp ------------------------------------------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSC
T ss_pred --------------------------------------ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 0145789999999999999999999999999999999985
Q ss_pred -CCcHHHHH--HH---------------------------------------HHhccccCCCC-CCCCCChhHHHHHHhc
Q 001366 529 -FDSERALA--AA---------------------------------------MSDLRDRILPP-SFLSENPKEAGFCLWQ 565 (1092)
Q Consensus 529 -f~~~~~~~--~~---------------------------------------~~~~~~~~~p~-~~~~~~~~~~~li~~l 565 (1092)
|....... .. ...+.....+. .....++.+.+|+.+|
T Consensus 229 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 308 (360)
T 3eqc_A 229 PIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKC 308 (360)
T ss_dssp CSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHH
Confidence 43321111 10 11111111111 1123467899999999
Q ss_pred cccCCCCCCCHHHHhhhhhhhhh
Q 001366 566 LHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 566 L~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|++||.+|||+.|+|+||||...
T Consensus 309 L~~dP~~Rpt~~ell~hp~~~~~ 331 (360)
T 3eqc_A 309 LIKNPAERADLKQLMVHAFIKRS 331 (360)
T ss_dssp HCSSTTTSCCHHHHHTSHHHHHH
T ss_pred hhcChhhCCCHHHHhhChHhhcc
Confidence 99999999999999999999875
No 186
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.97 E-value=2e-31 Score=302.48 Aligned_cols=250 Identities=16% Similarity=0.134 Sum_probs=184.5
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCch-----hhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-----DAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
|.+.+.++ |.|.||++... ..+..++.|+........ ......++..++...+|||++.++........
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 14 YDIGEELGSGQFAIVKKCREK----STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEET----TTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred EEEeeEeeecCCEEEEEEEEC----CCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 44444443 78999999763 224555665543222111 12334456677888899999987766543332
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
.+ .+|||++|++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+||+++.++
T Consensus 90 ~~----------------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~ 152 (321)
T 2a2a_A 90 VV----------------LILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN 152 (321)
T ss_dssp EE----------------EEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTT
T ss_pred EE----------------EEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCC
Confidence 22 3899999999999997654 577889999999999999999999999999999999999888
Q ss_pred ----cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccC
Q 001366 367 ----QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETAN 442 (1092)
Q Consensus 367 ----~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1092)
.+|++|||+++......
T Consensus 153 ~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------------------- 173 (321)
T 2a2a_A 153 IPIPHIKLIDFGLAHEIEDGV----------------------------------------------------------- 173 (321)
T ss_dssp SSSCCEEECCCTTCEECCTTC-----------------------------------------------------------
T ss_pred CCcCCEEEccCccceecCccc-----------------------------------------------------------
Confidence 79999999987643100
Q ss_pred ccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHH
Q 001366 443 ESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLF 522 (1092)
Q Consensus 443 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll 522 (1092)
......||+.|+|||++.+..++.++|||||||+|
T Consensus 174 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 208 (321)
T 2a2a_A 174 ---------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208 (321)
T ss_dssp ---------------------------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCCCccCcccccCCCCCCccccHHHHHHH
Confidence 01134689999999999999999999999999999
Q ss_pred HHHcCC---CCcHHHHHHHHHhcccc-CCC-CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 523 FELFGR---FDSERALAAAMSDLRDR-ILP-PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 523 ~ell~~---f~~~~~~~~~~~~~~~~-~~p-~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|||+++ |................ .++ ..+...++.+.+|+.+||++||.+|||+.|+|+||||...
T Consensus 209 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~ 279 (321)
T 2a2a_A 209 YILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (321)
T ss_dssp HHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCC
Confidence 999985 44433322222222211 112 1234567889999999999999999999999999999764
No 187
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.97 E-value=1e-31 Score=310.98 Aligned_cols=256 Identities=13% Similarity=0.070 Sum_probs=185.0
Q ss_pred HHHhhhc--cccceeeeCCCCCc-cccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNA-FKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.+ +|.|+||+|...+. -...+..++.|++.............++..++...+||||+.++.........+
T Consensus 73 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~-- 150 (367)
T 3l9p_A 73 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF-- 150 (367)
T ss_dssp EEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE--
T ss_pred eEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE--
Confidence 4444433 47899999984321 011244566666543333333444556777788889999998877654333222
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcC------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~ 364 (1092)
++||||+|++|.++|+..+ ..++..+++.|+.||+.||+|||++||+||||||+||||+.
T Consensus 151 --------------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~ 216 (367)
T 3l9p_A 151 --------------ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTC 216 (367)
T ss_dssp --------------EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESC
T ss_pred --------------EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEec
Confidence 3899999999999997654 34788899999999999999999999999999999999995
Q ss_pred CC---cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 365 SN---QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 365 ~~---~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
++ .+||+|||+++.......
T Consensus 217 ~~~~~~~kL~DFG~a~~~~~~~~--------------------------------------------------------- 239 (367)
T 3l9p_A 217 PGPGRVAKIGDFGMARDIYRAGY--------------------------------------------------------- 239 (367)
T ss_dssp SSTTCCEEECCCHHHHHHHHHSS---------------------------------------------------------
T ss_pred CCCCceEEECCCccccccccccc---------------------------------------------------------
Confidence 55 599999999986541100
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHH
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVL 521 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvl 521 (1092)
........||+.|+|||++.+..++.++|||||||+
T Consensus 240 --------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~i 275 (367)
T 3l9p_A 240 --------------------------------------------YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 275 (367)
T ss_dssp --------------------------------------------CTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred --------------------------------------------cccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHH
Confidence 000114567899999999999999999999999999
Q ss_pred HHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 522 FFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 522 l~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
||||++ + |....... ....+.....++.....++.+.+|+.+||+.||.+|||+.+|+++.++..
T Consensus 276 l~ellt~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 276 LWEIFSLGYMPYPSKSNQE-VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp HHHHHTTSCCSSTTCCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCCCCHHH-HHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 999997 5 44333322 22222222223333455788999999999999999999999999987654
No 188
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.97 E-value=1.6e-31 Score=311.96 Aligned_cols=251 Identities=14% Similarity=0.137 Sum_probs=176.2
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCch-hhHhhhhhhhhhccCC--CCCCCccccceecCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNA--SPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 288 (1092)
|.+.+.+ +|.|+||++...+ +..++.|+........ ......++..++.... ||||+.+++....+...+
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~ 132 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNEK-----KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 132 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECTT-----CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred eEEEEEEccCCCeEEEEEEcCC-----CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEE
Confidence 4444444 4789999997643 4556666653332222 2233445555666654 599998877655444333
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
++|| +.|++|.++|...+ .++..+++.|++||+.||.|||++||+||||||+||||+ ++.+
T Consensus 133 ----------------lv~E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~ 193 (390)
T 2zmd_A 133 ----------------MVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGML 193 (390)
T ss_dssp ----------------EEEE-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCE
T ss_pred ----------------EEEe-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeE
Confidence 2677 78999999998765 567778999999999999999999999999999999995 6899
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++.+.....
T Consensus 194 kl~DFG~a~~~~~~~~---------------------------------------------------------------- 209 (390)
T 2zmd_A 194 KLIDFGIANQMQPDTT---------------------------------------------------------------- 209 (390)
T ss_dssp EECCCSSSCCC---------------------------------------------------------------------
T ss_pred EEEecCccccccCCCc----------------------------------------------------------------
Confidence 9999999876441000
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-----------CCCCccccchh
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----------GVCTTSSNIYS 517 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----------~~~t~~sDIwS 517 (1092)
.......+||++|+|||++.+ ..++.++||||
T Consensus 210 -------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwS 252 (390)
T 2zmd_A 210 -------------------------------------SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 252 (390)
T ss_dssp -----------------------------------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHH
T ss_pred -------------------------------------cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHH
Confidence 000124579999999999875 46899999999
Q ss_pred hhHHHHHHcCC---CCcHHHH-HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 518 LGVLFFELFGR---FDSERAL-AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 518 LGvll~ell~~---f~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
|||+||||+++ |...... ......+......+.....++.+.+|+.+||.+||.+|||+.|+|+||||....
T Consensus 253 lGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 328 (390)
T 2zmd_A 253 LGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328 (390)
T ss_dssp HHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred HHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence 99999999986 4332111 122222222111111222357788999999999999999999999999998643
No 189
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.97 E-value=3.2e-32 Score=307.57 Aligned_cols=258 Identities=19% Similarity=0.264 Sum_probs=187.6
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCch--hhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS--DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
|.+.+.++ |.|.||++... ..+..++.|++....... ......++...+...+||||+.+++.........
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~- 88 (311)
T 3ork_A 14 YELGEILGFGGMSEVHLARDL----RDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG- 88 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEET----TTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTE-
T ss_pred EEEEEEEccCCCEEEEEEEEC----CCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCC-
Confidence 55555554 78999999852 225566666654322211 2233456677788889999998876654332220
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
..+ .++|||++|++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 89 ----~~~-------~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~k 156 (311)
T 3ork_A 89 ----PLP-------YIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVK 156 (311)
T ss_dssp ----EEE-------EEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEE
T ss_pred ----ccc-------EEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEE
Confidence 001 13899999999999997765 477779999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+++.+.....
T Consensus 157 l~Dfg~a~~~~~~~~----------------------------------------------------------------- 171 (311)
T 3ork_A 157 VMDFGIARAIADSGN----------------------------------------------------------------- 171 (311)
T ss_dssp ECCCSCC-------------------------------------------------------------------------
T ss_pred EeeccCccccccccc-----------------------------------------------------------------
Confidence 999999876541100
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC-
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~- 528 (1092)
........+||+.|+|||++.+..++.++|||||||+||||+++
T Consensus 172 -----------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~ 216 (311)
T 3ork_A 172 -----------------------------------SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216 (311)
T ss_dssp ---------------------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred -----------------------------------ccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence 00011145789999999999999999999999999999999985
Q ss_pred --CCcHHHHHHHHHhccccCCCCC--CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPS--FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|..................++. ....++.+.+|+.+||++||.+||++.++|.|+|+...
T Consensus 217 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 217 PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp CSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 6655555555555555444432 34567889999999999999999999999999999754
No 190
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.97 E-value=2.3e-32 Score=316.80 Aligned_cols=262 Identities=12% Similarity=0.035 Sum_probs=169.9
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccC-chhhHhhhhh----hhhhccCCCCCCCccccce-----
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAG----AMMVASNASPKPVGVGTAV----- 281 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~----- 281 (1092)
|.+.+.++ |.|+||++... ..+..++.|++..... .......++. .+++.. +|||++..+...
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d 138 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDV----ERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSD 138 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEET----TTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCE
T ss_pred eeeeeeccCCCCEEEEEEEEC----CCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeeh
Confidence 55555554 78999999852 1255667766644333 2222333333 356667 899988643221
Q ss_pred --ecCCCCCCCccCCCCC---ccc-cCCCcccccCCCCCHHHHHhhcCCCCCHHHH------HHHHHHHHHHHHHhhhcC
Q 001366 282 --VSNGSLDLGARTGVPA---SCW-IGGLRQGSSDHGVNLREWLNARGHKGKRIEC------LYIFRQIVALVDYHHTQG 349 (1092)
Q Consensus 282 --~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~------~~i~~qil~~l~~lHs~g 349 (1092)
....... ...... .++ ....++|||++ ++|.++|+..+..++.... +.++.||+.||+|||++|
T Consensus 139 ~~~~~~~~~---~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ 214 (371)
T 3q60_A 139 AVAVQSQPP---FAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKG 214 (371)
T ss_dssp EEEETTSCS---SSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred heecCCCCC---eeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC
Confidence 1111100 000000 000 11245899999 8999999875545555455 677799999999999999
Q ss_pred ccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCccccccccc
Q 001366 350 VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSL 429 (1092)
Q Consensus 350 IvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (1092)
|+||||||+||||+.++.+||+|||+++.....
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~----------------------------------------------- 247 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----------------------------------------------- 247 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTCE-----------------------------------------------
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCCC-----------------------------------------------
Confidence 999999999999999999999999998764310
Q ss_pred ccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC--C
Q 001366 430 FPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--G 507 (1092)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~--~ 507 (1092)
.....+|+.|+|||++.+ .
T Consensus 248 -----------------------------------------------------------~~~~~~t~~y~aPE~~~~~~~ 268 (371)
T 3q60_A 248 -----------------------------------------------------------GPASSVPVTYAPREFLNASTA 268 (371)
T ss_dssp -----------------------------------------------------------EEGGGSCGGGCCHHHHTCSEE
T ss_pred -----------------------------------------------------------ccCccCCcCCcChhhccCCCC
Confidence 002346689999999987 7
Q ss_pred CCCccccchhhhHHHHHHcCC---CCcHHHHHH-HHH------hccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001366 508 VCTTSSNIYSLGVLFFELFGR---FDSERALAA-AMS------DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1092)
Q Consensus 508 ~~t~~sDIwSLGvll~ell~~---f~~~~~~~~-~~~------~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~ 577 (1092)
.++.++|||||||+||||+++ |........ .+. ........+.....++.+.+|+.+||++||.+|||+.
T Consensus 269 ~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 348 (371)
T 3q60_A 269 TFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPL 348 (371)
T ss_dssp ECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHH
T ss_pred CcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHH
Confidence 799999999999999999986 333211000 000 0011112233346688999999999999999999999
Q ss_pred HHhhhhhhhhhhc
Q 001366 578 EILQSEVTNEFQE 590 (1092)
Q Consensus 578 eiL~~~~~~~~~~ 590 (1092)
++|+||||.+...
T Consensus 349 e~l~hp~f~~~~~ 361 (371)
T 3q60_A 349 EAMETPEFLQLQN 361 (371)
T ss_dssp HHTTSHHHHHHHH
T ss_pred HHhcCHHHHHHHH
Confidence 9999999987644
No 191
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.97 E-value=3.4e-31 Score=298.96 Aligned_cols=249 Identities=16% Similarity=0.136 Sum_probs=178.7
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
+|.+.+.+ +|.|.||+|...+ .++.+++..... ........++..++...+|||++.++.....+ ..
T Consensus 37 ~~~~~~~lG~G~~g~Vy~~~~~~-------~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~-- 106 (307)
T 3lb7_A 37 EVMLSTRIGSGSFGTVYKGKWHG-------DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-NL-- 106 (307)
T ss_dssp SCCEEEEEEECSSCEEEEEESSS-------EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-SC--
T ss_pred ceEEEeEecCCCCeEEEEEEECC-------EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC-cE--
Confidence 34444444 4789999998733 233333322222 22234445667788888999999876642211 11
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
..+|||++|++|.+++......++..+++.|+.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 107 --------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~k 172 (307)
T 3lb7_A 107 --------------AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVK 172 (307)
T ss_dssp --------------EEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEE
T ss_pred --------------EEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEE
Confidence 138999999999999987777889989999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+++.......
T Consensus 173 l~DFg~a~~~~~~~~----------------------------------------------------------------- 187 (307)
T 3lb7_A 173 IGDFGLATVKSRWSG----------------------------------------------------------------- 187 (307)
T ss_dssp ECCCCSSCC-----------------------------------------------------------------------
T ss_pred EccCCCceecccccc-----------------------------------------------------------------
Confidence 999999875331000
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc---CCCCCccccchhhhHHHHHHc
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS---GGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~t~~sDIwSLGvll~ell 526 (1092)
........||+.|+|||++. +..++.++|||||||+||||+
T Consensus 188 ------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~ell 231 (307)
T 3lb7_A 188 ------------------------------------SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELM 231 (307)
T ss_dssp ------------------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHH
Confidence 00111456899999999986 567899999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccccC----CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLRDRI----LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~~~----~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~ 586 (1092)
++ |............+.... ++......++.+.+|+.+||+.+|.+||++.+|+++.+.-
T Consensus 232 tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l 298 (307)
T 3lb7_A 232 TGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp HSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHH
T ss_pred hCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHH
Confidence 85 443222222222222222 2223345678899999999999999999999999987654
No 192
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.2e-29 Score=295.79 Aligned_cols=283 Identities=14% Similarity=0.184 Sum_probs=226.6
Q ss_pred EEEEEcCCCCE-EEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCC
Q 001366 783 CSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG 861 (1092)
Q Consensus 783 ~sl~fspdg~~-latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg 861 (1092)
..++++|+... +++|+.||.|+||++..... . ........+|...|++++|+|+++.+|++|+.||+|+|||+.++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~--~-~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGR--V-DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEE--C-CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCC--C-CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 34788887654 44678999999999864211 0 01122345799999999999944899999999999999999987
Q ss_pred -------ceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeE--e-cCCceEEEEEccCCCeEEEE
Q 001366 862 -------QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATI--K-NIANVCCVQFSAHSSHLLAF 931 (1092)
Q Consensus 862 -------~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l--~-~~~~V~sl~fsp~~~~~lat 931 (1092)
+.+..+.+|...|++++|+|....+|++|+.|++|++||+++++++..+ . +...|.+++|+|++. +|++
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~ 193 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGA-LICT 193 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSS-CEEE
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCC-EEEE
Confidence 6688899999999999999933479999999999999999999999888 3 678899999999985 8999
Q ss_pred EECCCeEEEEEcCCCCcceEEe-cCCCCC-eEEEEEc-CCCEEEEE---ECCCeEEEEEcCCCCCCCCCCCceeEEE-cC
Q 001366 932 GSADYRTYCYDLRNARAPWCVL-AGHEKA-VSYVKFL-DSGTLVTA---STDNKLKLWDLKRTSHTGPSTNACSLTF-SG 1004 (1092)
Q Consensus 932 gs~Dg~I~vwDlr~~~~~~~~l-~~H~~~-V~~v~fs-~~~~L~Sg---s~Dg~I~vWDl~~~~~~~~~~~~~~~~l-~~ 1004 (1092)
++.|+.|++||+++++. +..+ .+|... +.++.|+ ++.+|++| +.|+.|++||+++... .+... ..
T Consensus 194 ~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~-------~~~~~~~~ 265 (402)
T 2aq5_A 194 SCRDKRVRVIEPRKGTV-VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE-------PLSLQELD 265 (402)
T ss_dssp EETTSEEEEEETTTTEE-EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS-------CSEEEECC
T ss_pred EecCCcEEEEeCCCCce-eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC-------CceEEecc
Confidence 99999999999998764 4555 788876 8999999 45566677 6899999999985321 12222 25
Q ss_pred CCCCeEEEEEecCCCEEE-EEecCCcEEEEeCCCCCc-eeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEec
Q 001366 1005 HTNEKNFVGLSTADGYIA-CGSESNEVYAYHRSLPMP-ITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANS 1082 (1092)
Q Consensus 1005 h~~~V~~v~~spdg~~la-sgs~Dg~I~Iwd~~~~~~-i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~ 1082 (1092)
|...+.+++|+|++.+|+ +|+.|+.|++|++..+++ +..+.- ..|...|.+++|+|++.++++ .
T Consensus 266 ~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~------------~~~~~~v~~~~~sp~~~~~~s--~ 331 (402)
T 2aq5_A 266 TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSM------------FSSKESQRGMGYMPKRGLEVN--K 331 (402)
T ss_dssp CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEE------------ECCSSCCSEEEECCGGGSCGG--G
T ss_pred CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecc------------cccCCcccceEEeccccccee--c
Confidence 778899999999999886 566799999999988775 333320 125678999999999998865 5
Q ss_pred CCeEEEEEc
Q 001366 1083 SGCIKVLQM 1091 (1092)
Q Consensus 1083 DG~V~vW~l 1091 (1092)
++.+++|++
T Consensus 332 ~~~~~~~~l 340 (402)
T 2aq5_A 332 CEIARFYKL 340 (402)
T ss_dssp TEEEEEEEE
T ss_pred ceeEEEEEc
Confidence 679999986
No 193
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.97 E-value=4.3e-32 Score=300.83 Aligned_cols=254 Identities=15% Similarity=0.114 Sum_probs=164.0
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
+.+|.+.+.++ +.|.||++... ..+..++.|+...... ........++..++...+|||++.++........
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 85 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESI----HTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNY 85 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSE
T ss_pred cccceeeeeecCCCceEEEEEEEc----cCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCe
Confidence 34555555544 78999999752 1245556655522111 1111334456667788899999987766543322
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
.+ ++|||++|++|.+++......++..+++.++.||+.||+|||++||+||||||+||+++.++
T Consensus 86 ~~----------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~ 149 (278)
T 3cok_A 86 VY----------------LVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNM 149 (278)
T ss_dssp EE----------------EEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTC
T ss_pred EE----------------EEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC
Confidence 22 38999999999999988766788889999999999999999999999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+|++|||+++....+.
T Consensus 150 ~~kl~dfg~~~~~~~~~--------------------------------------------------------------- 166 (278)
T 3cok_A 150 NIKIADFGLATQLKMPH--------------------------------------------------------------- 166 (278)
T ss_dssp CEEECCCTTCEECC------------------------------------------------------------------
T ss_pred CEEEEeecceeeccCCC---------------------------------------------------------------
Confidence 99999999887643100
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHc
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell 526 (1092)
.......||+.|+|||.+.+..++.++|||||||++|||+
T Consensus 167 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 206 (278)
T 3cok_A 167 ----------------------------------------EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLL 206 (278)
T ss_dssp -----------------------------------------------------------------CTHHHHHHHHHHHHH
T ss_pred ----------------------------------------CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHH
Confidence 0001346899999999999988999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
++ |................. ......++.+.+|+.+||++||.+|||+.++|+||||....
T Consensus 207 ~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 207 IGRPPFDTDTVKNTLNKVVLADY--EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp HSSCSSCCCSCC-----CCSSCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred hCCCCCCChhHHHHHHHHhhccc--CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence 85 433221111111111111 11223478899999999999999999999999999998643
No 194
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.97 E-value=1.2e-31 Score=309.14 Aligned_cols=244 Identities=17% Similarity=0.181 Sum_probs=173.5
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC-----CCCCCCccccceecCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-----ASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 286 (1092)
|.+.+.+ +|.|.||++.... .+..++.|++... .........+..++... .||||+.++........
T Consensus 37 y~~~~~lG~G~~g~V~~~~~~~----~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~ 110 (360)
T 3llt_A 37 FLVIRKMGDGTFGRVLLCQHID----NKKYYAVKVVRNI--KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH 110 (360)
T ss_dssp EEEEEEEEECSSEEEEEEEETT----TCCEEEEEEECSC--HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE
T ss_pred EEEEEEEcccCCeEEEEEEECC----CCeEEEEEEeccc--hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe
Confidence 4554444 4789999998632 2455666665321 11222223333444444 49999988776554433
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc-
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ- 364 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~- 364 (1092)
.+ ++|||+ |++|.+++.... ..++..+++.|+.||+.||+|||++||+||||||+||||+.
T Consensus 111 ~~----------------lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 111 MC----------------LIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDP 173 (360)
T ss_dssp EE----------------EEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCT
T ss_pred eE----------------EEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccc
Confidence 33 379999 999999997654 35788899999999999999999999999999999999975
Q ss_pred ------------------------CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccC
Q 001366 365 ------------------------SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHN 420 (1092)
Q Consensus 365 ------------------------~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (1092)
.+.+||+|||+++....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~--------------------------------------- 214 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD--------------------------------------- 214 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS---------------------------------------
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecCC---------------------------------------
Confidence 77899999988765220
Q ss_pred cccccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccC
Q 001366 421 MNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYAS 500 (1092)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 500 (1092)
.....+||+.|+|
T Consensus 215 -------------------------------------------------------------------~~~~~~gt~~y~a 227 (360)
T 3llt_A 215 -------------------------------------------------------------------YHGSIINTRQYRA 227 (360)
T ss_dssp -------------------------------------------------------------------CCCSCCSCGGGCC
T ss_pred -------------------------------------------------------------------CCcCccCcccccC
Confidence 0014568999999
Q ss_pred cccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHH--HHHHhccccC-------------------------CCCC
Q 001366 501 PEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALA--AAMSDLRDRI-------------------------LPPS 550 (1092)
Q Consensus 501 PE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~--~~~~~~~~~~-------------------------~p~~ 550 (1092)
||++.+..++.++|||||||+||||+++ |....... ..+..+.... .|..
T Consensus 228 PE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 307 (360)
T 3llt_A 228 PEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPEN 307 (360)
T ss_dssp HHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTT
T ss_pred cHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCccc
Confidence 9999999999999999999999999985 54432222 2221111110 0000
Q ss_pred -----------------CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001366 551 -----------------FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1092)
Q Consensus 551 -----------------~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~ 586 (1092)
....++.+.+|+.+||++||.+|||+.|+|+||||+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 308 ASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp CSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred ccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 011236677999999999999999999999999984
No 195
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.97 E-value=2.5e-31 Score=308.22 Aligned_cols=252 Identities=16% Similarity=0.142 Sum_probs=182.0
Q ss_pred hHHHhhhcc--ccceeeeCCCCC---ccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLN---AFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 286 (1092)
.|.+.+.++ |.|.||++.... .-...+..++.|+..............++..++... +||||+.++.....+..
T Consensus 82 ~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~ 161 (370)
T 2psq_A 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 161 (370)
T ss_dssp GEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSS
T ss_pred HCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCC
Confidence 455555444 689999986411 001113345555553332233334456667777777 89999998776554333
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCcc
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRIECLYIFRQIVALVDYHHTQGVT 351 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~~~~~~~i~~qil~~l~~lHs~gIv 351 (1092)
.+ ++|||++||+|.++|...+ ..++..+++.++.||+.||+|||++||+
T Consensus 162 ~~----------------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 225 (370)
T 2psq_A 162 LY----------------VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 225 (370)
T ss_dssp CE----------------EEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred EE----------------EEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 33 3899999999999997654 2467789999999999999999999999
Q ss_pred ccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCccccccccccc
Q 001366 352 FLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFP 431 (1092)
Q Consensus 352 HrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (1092)
||||||+||||+.++.+||+|||+++.......
T Consensus 226 HrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~----------------------------------------------- 258 (370)
T 2psq_A 226 HRDLAARNVLVTENNVMKIADFGLARDINNIDY----------------------------------------------- 258 (370)
T ss_dssp CSCCCGGGEEECTTCCEEECCCSSCEETTCCCT-----------------------------------------------
T ss_pred ccccchhhEEECCCCCEEEccccCCcccCcccc-----------------------------------------------
Confidence 999999999999999999999999876441100
Q ss_pred CccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCc
Q 001366 432 SKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTT 511 (1092)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~ 511 (1092)
........||+.|+|||++.+..++.
T Consensus 259 ------------------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~ 284 (370)
T 2psq_A 259 ------------------------------------------------------YKKTTNGRLPVKWMAPEALFDRVYTH 284 (370)
T ss_dssp ------------------------------------------------------TCTTTTTTSCGGGCCHHHHHTCCCCH
T ss_pred ------------------------------------------------------eecccCCCcccceECHhHhcCCCCCc
Confidence 00011345788899999999999999
Q ss_pred cccchhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 512 SSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 512 ~sDIwSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
++|||||||+||||++ + |.... ....+..+.....++.....++.+.+|+.+||+.||.+||++.|++++
T Consensus 285 ~~DvwslG~il~ellt~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~ 358 (370)
T 2psq_A 285 QSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 358 (370)
T ss_dssp HHHHHHHHHHHHHHHTTSCCSSTTCC-GGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999998 4 33221 112222333333333444567889999999999999999999999985
No 196
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.97 E-value=1.6e-31 Score=306.27 Aligned_cols=243 Identities=15% Similarity=0.163 Sum_probs=171.1
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchh-hHhhhhhhhhhccCCC--CCCCccccceecCCCCCCCccCCCCC
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-AALKAAGAMMVASNAS--PKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
+|.|.||++...+ +..++.|++........ .....++...+....| ||++.+++....+...+
T Consensus 20 G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~--------- 85 (343)
T 3dbq_A 20 GGSSKVFQVLNEK-----KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY--------- 85 (343)
T ss_dssp CSSEEEEEEECTT-----SCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE---------
T ss_pred CCCeEEEEEEeCC-----CCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE---------
Confidence 4789999997643 45566665533322222 2333445566666655 89998877655433333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
++|| +.|++|.+++...+ .++..+++.|+.||+.||+|||++||+||||||+|||++ ++.+||+|||+++
T Consensus 86 -------lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~ 155 (343)
T 3dbq_A 86 -------MVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIAN 155 (343)
T ss_dssp -------EEEC-CCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred -------EEEe-CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeeccccc
Confidence 2677 78899999998764 577779999999999999999999999999999999996 7889999999987
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.......
T Consensus 156 ~~~~~~~------------------------------------------------------------------------- 162 (343)
T 3dbq_A 156 QMQPDTT------------------------------------------------------------------------- 162 (343)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ccCcccc-------------------------------------------------------------------------
Confidence 6441000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-----------CCCCccccchhhhHHHHHHc
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----------GVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----------~~~t~~sDIwSLGvll~ell 526 (1092)
.......+||++|+|||++.+ ..++.++|||||||+||||+
T Consensus 163 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell 214 (343)
T 3dbq_A 163 ----------------------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 214 (343)
T ss_dssp -----------------------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHH
T ss_pred ----------------------------cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHH
Confidence 000114579999999999865 67899999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccccCCCCCC-CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLRDRILPPSF-LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
++ |.........+........+..+ ...++.+.+|+.+||++||.+|||+.|+|+||||...
T Consensus 215 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~ 280 (343)
T 3dbq_A 215 YGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 280 (343)
T ss_dssp HSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred hCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence 86 43221111222222222222222 2335678899999999999999999999999999754
No 197
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.3e-30 Score=301.54 Aligned_cols=299 Identities=13% Similarity=0.127 Sum_probs=222.7
Q ss_pred hccchhhhhhccccccCC-C--CcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Q 001366 727 RDRENLFLAQQDQEIQNP-T--DRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKI 803 (1092)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~-~--~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I 803 (1092)
.+|.+.+..+.+ +| + -.++++.|+++++|+....+...........+|...|++++|+|++++|++|+.|++|
T Consensus 60 ~~h~~~V~~~~~----s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i 135 (437)
T 3gre_A 60 ENEPNSITSSAV----SPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQI 135 (437)
T ss_dssp TTTTSCEEEEEE----ECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred cCCCCceEEEEE----CCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEE
Confidence 666666666543 34 3 3457889999999998651111111101112589999999999999999999999999
Q ss_pred EEEEcCCCCCCC-c---ccccceeee---c--CCCCeEEEE--EecCCCCEEEEEECCCcEEEEECCCCceEEEeec--c
Q 001366 804 KIFEFNALFNDS-V---DVYYPAVEM---S--NRSKLSCVC--WNNYIKNYLASADYDGVVKLWDACTGQTVSHYIE--H 870 (1092)
Q Consensus 804 ~Iwd~~~~~~~~-~---~~~~~~~~~---~--h~~~V~~v~--~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~--h 870 (1092)
+|||+....... . ..+ ..... . +...+.++. ++++ +.+|++|+.||+|++||+.+++.+..+.+ |
T Consensus 136 ~vwd~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h 213 (437)
T 3gre_A 136 IVLKVNHYQQESEVKFLNCE-CIRKINLKNFGKNEYAVRMRAFVNEE-KSLLVALTNLSRVIIFDIRTLERLQIIENSPR 213 (437)
T ss_dssp EEEEEEEEEETTEEEEEEEE-EEEEEEGGGGSSCCCEEEEEEEECSS-CEEEEEEETTSEEEEEETTTCCEEEEEECCGG
T ss_pred EEEEeccccCCceeeccccc-eeEEEEccCcccccCceEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCeeeEEEccCCC
Confidence 999985210000 0 001 11111 1 567788888 4566 88999999999999999999999999998 8
Q ss_pred CccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe--cCCceEEEEEcc----CCCeEEEEEECCCeEEEEEcC
Q 001366 871 EKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK--NIANVCCVQFSA----HSSHLLAFGSADYRTYCYDLR 944 (1092)
Q Consensus 871 ~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~--~~~~V~sl~fsp----~~~~~latgs~Dg~I~vwDlr 944 (1092)
...|++++|+| ++.+|++|+.||+|++||+++++++.++. +...|.+++|+| ++ .+|++|+.|+.|++||++
T Consensus 214 ~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~-~~l~s~~~dg~i~iwd~~ 291 (437)
T 3gre_A 214 HGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNS-VIVVGGSSKTFLTIWNFV 291 (437)
T ss_dssp GCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTE-EEEEEESTTEEEEEEETT
T ss_pred CCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCc-cEEEEEcCCCcEEEEEcC
Confidence 99999999999 89999999999999999999999998874 567899997765 44 589999999999999999
Q ss_pred CCCcceEEecC--------------------------CCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCC----
Q 001366 945 NARAPWCVLAG--------------------------HEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPS---- 994 (1092)
Q Consensus 945 ~~~~~~~~l~~--------------------------H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~---- 994 (1092)
+++. +..+.+ |...|++++|+++.+|++|+.|+.|++||+.+.......
T Consensus 292 ~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 370 (437)
T 3gre_A 292 KGHC-QYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISPS 370 (437)
T ss_dssp TTEE-EEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEECC-
T ss_pred CCcE-EEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEeccc
Confidence 7753 233322 666789999997778999999999999999854321000
Q ss_pred -------------------------CCceeEEEcCCCCCeEEEEEecC--CCEEEEEecCCcEEEEe
Q 001366 995 -------------------------TNACSLTFSGHTNEKNFVGLSTA--DGYIACGSESNEVYAYH 1034 (1092)
Q Consensus 995 -------------------------~~~~~~~l~~h~~~V~~v~~spd--g~~lasgs~Dg~I~Iwd 1034 (1092)
..........|...|++++|+++ +.+|++|+.||.|+||+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 371 RFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp -CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 00001112238999999999998 77999999999999994
No 198
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.97 E-value=1.7e-31 Score=297.56 Aligned_cols=251 Identities=18% Similarity=0.129 Sum_probs=173.2
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhh-HhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDA-ALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+.+.+ +|.|.||++... ..+..++.|++......... ........++....|||++.++.....+...+
T Consensus 8 ~y~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~- 82 (290)
T 3fme_A 8 DLEPIMELGRGAYGVVEKMRHV----PSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW- 82 (290)
T ss_dssp GEEEEEEEEECSSEEEEEEEET----TTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEE-
T ss_pred hhhhHHhcCCCCCeEEEEEEec----CCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEE-
Confidence 34444444 478999999862 22556666665433222222 22333344477789999998877655333322
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhhc-CccccCCCCCCeEEccC
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQ-GVTFLDLKPSSFKLLQS 365 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lHs~-gIvHrDLKP~Nill~~~ 365 (1092)
++|||++| +|.+++.. .+..++..+++.|+.||+.||+|||++ ||+||||||+||+++.+
T Consensus 83 ---------------lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~ 146 (290)
T 3fme_A 83 ---------------ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINAL 146 (290)
T ss_dssp ---------------EEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTT
T ss_pred ---------------EEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCC
Confidence 37999986 99888754 455788889999999999999999998 99999999999999999
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+.+||+|||+++......
T Consensus 147 ~~~kl~Dfg~~~~~~~~~-------------------------------------------------------------- 164 (290)
T 3fme_A 147 GQVKMCDFGISGYLVDDV-------------------------------------------------------------- 164 (290)
T ss_dssp CCEEBCCC------------------------------------------------------------------------
T ss_pred CCEEEeecCCcccccccc--------------------------------------------------------------
Confidence 999999999987643100
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccc----cCCCCCccccchhhhHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL----SGGVCTTSSNIYSLGVL 521 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l----~~~~~t~~sDIwSLGvl 521 (1092)
......||+.|+|||++ .+..++.++|||||||+
T Consensus 165 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~i 202 (290)
T 3fme_A 165 ------------------------------------------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGIT 202 (290)
T ss_dssp -----------------------------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHH
Confidence 00134689999999996 45678999999999999
Q ss_pred HHHHcCC---CCcH-HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 522 FFELFGR---FDSE-RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 522 l~ell~~---f~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
+|||+++ |... ......................++.+.+|+.+||++||.+|||+.|+|+||||...
T Consensus 203 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~ 273 (290)
T 3fme_A 203 MIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273 (290)
T ss_dssp HHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence 9999985 4331 22222222222222222233457889999999999999999999999999999864
No 199
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.97 E-value=1.4e-31 Score=304.69 Aligned_cols=245 Identities=16% Similarity=0.163 Sum_probs=180.6
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|+||++... ..+..++.|++...... .......++...+... .|||++.++.........+
T Consensus 39 ~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~--------- 105 (327)
T 3lm5_A 39 RGKFAVVRQCISK----STGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEII--------- 105 (327)
T ss_dssp EETTEEEEEEEET----TTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE---------
T ss_pred CCCCeEEEEEEEC----CCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEE---------
Confidence 4578999999763 22556666655332221 1123334444455555 5699998776654333222
Q ss_pred ccccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc---CCcEEEecc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ---SNQVKYIGP 373 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~---~~~vkl~Df 373 (1092)
++|||++|++|.+++... ...++..+++.|+.||+.||+|||++||+||||||+|||++. .+.+||+||
T Consensus 106 -------lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Df 178 (327)
T 3lm5_A 106 -------LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDF 178 (327)
T ss_dssp -------EEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred -------EEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeC
Confidence 389999999999998543 356888899999999999999999999999999999999987 789999999
Q ss_pred cccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCC
Q 001366 374 IIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPH 453 (1092)
Q Consensus 374 g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 453 (1092)
|+++.....
T Consensus 179 g~a~~~~~~----------------------------------------------------------------------- 187 (327)
T 3lm5_A 179 GMSRKIGHA----------------------------------------------------------------------- 187 (327)
T ss_dssp GGCEEC--------------------------------------------------------------------------
T ss_pred ccccccCCc-----------------------------------------------------------------------
Confidence 998764310
Q ss_pred CCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CC
Q 001366 454 SHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FD 530 (1092)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~ 530 (1092)
......+||+.|+|||++.+..++.++|||||||+||||+++ |.
T Consensus 188 ---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~ 234 (327)
T 3lm5_A 188 ---------------------------------CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFV 234 (327)
T ss_dssp ---------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred ---------------------------------cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 001145789999999999999999999999999999999985 44
Q ss_pred cHHHHHHH--HHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 531 SERALAAA--MSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 531 ~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
........ +........++.+...++.+.+|+.+||++||.+|||+.++|+||||...
T Consensus 235 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~ 294 (327)
T 3lm5_A 235 GEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQW 294 (327)
T ss_dssp CSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCC
T ss_pred CCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccc
Confidence 43333222 23333333444556678889999999999999999999999999999865
No 200
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.97 E-value=1.4e-31 Score=297.11 Aligned_cols=250 Identities=14% Similarity=0.103 Sum_probs=182.0
Q ss_pred hhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 212 ~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
..|.+.+.++ |.|.||++.... .+..++.|++...... .......++..++...+|||++.++.........
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (279)
T 3fdn_A 9 EDFEIGRPLGKGKFGNVYLAREKQ----SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRV 84 (279)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETT----TCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred ccEEEeeEEecCCCeEEEEEEEcc----CCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEE
Confidence 3555555554 789999997632 2445555554221111 1122344566677888999999877665433222
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~ 367 (1092)
+ ++|||++|++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+||+++.++.
T Consensus 85 ~----------------lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~ 147 (279)
T 3fdn_A 85 Y----------------LILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 147 (279)
T ss_dssp E----------------EEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSC
T ss_pred E----------------EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCC
Confidence 2 3899999999999997764 4777799999999999999999999999999999999999999
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+||+|||++......
T Consensus 148 ~~l~Dfg~~~~~~~~----------------------------------------------------------------- 162 (279)
T 3fdn_A 148 LKIADFGWSVHAPSS----------------------------------------------------------------- 162 (279)
T ss_dssp EEECSCCEESCC--------------------------------------------------------------------
T ss_pred EEEEeccccccCCcc-----------------------------------------------------------------
Confidence 999999987543210
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~ 527 (1092)
......||+.|+|||.+.+..++.++|||||||++|||++
T Consensus 163 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~ 202 (279)
T 3fdn_A 163 ----------------------------------------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 202 (279)
T ss_dssp ---------------------------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHH
Confidence 0013468999999999999999999999999999999998
Q ss_pred C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 528 R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 528 ~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
+ |................. +.....++.+.+|+.+||++||.+|||+.|+|+||||....
T Consensus 203 g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~ 265 (279)
T 3fdn_A 203 GKPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 265 (279)
T ss_dssp SSCTTCCSSHHHHHHHHHHTCC--CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHC
T ss_pred CCCCCCCCcHHHHHHHHHhCCC--CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCc
Confidence 6 443322222222111111 11223478899999999999999999999999999998754
No 201
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.97 E-value=1.3e-31 Score=302.01 Aligned_cols=247 Identities=16% Similarity=0.205 Sum_probs=177.7
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchh-hHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-AALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
+|.|.||++...+ .+..++.|++........ .....++...+...+|||++.++.........+
T Consensus 14 G~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~----------- 78 (311)
T 4agu_A 14 GSYGVVFKCRNRD----TGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLH----------- 78 (311)
T ss_dssp CSSEEEEEEEETT----TCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE-----------
T ss_pred cCCeEEEEEEeCC----CCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEE-----------
Confidence 4789999998632 245566665533332222 233456777788889999998877655433322
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+|||++|++|.++++..+ .++...+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++..
T Consensus 79 -----lv~e~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 152 (311)
T 4agu_A 79 -----LVFEYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLL 152 (311)
T ss_dssp -----EEEECCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred -----EEEEeCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhc
Confidence 3899999999999987654 4777799999999999999999999999999999999999999999999998764
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
....
T Consensus 153 ~~~~---------------------------------------------------------------------------- 156 (311)
T 4agu_A 153 TGPS---------------------------------------------------------------------------- 156 (311)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred cCcc----------------------------------------------------------------------------
Confidence 3100
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~~ 535 (1092)
......+||++|+|||.+.+ ..++.++|||||||++|||+++ |.+....
T Consensus 157 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 209 (311)
T 4agu_A 157 ---------------------------DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV 209 (311)
T ss_dssp ------------------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ---------------------------cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence 00114578999999999987 6789999999999999999986 4433222
Q ss_pred HHHH--Hhccc------------------cCCCC---------CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001366 536 AAAM--SDLRD------------------RILPP---------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1092)
Q Consensus 536 ~~~~--~~~~~------------------~~~p~---------~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~ 586 (1092)
.... ..... ...|. .+...++.+.+|+.+||++||.+|||++|+|+||||.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~ 289 (311)
T 4agu_A 210 DQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289 (311)
T ss_dssp HHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGT
T ss_pred HHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHH
Confidence 2211 11100 01111 1245677889999999999999999999999999998
Q ss_pred hhhcc
Q 001366 587 EFQEV 591 (1092)
Q Consensus 587 ~~~~~ 591 (1092)
..++.
T Consensus 290 ~~~~~ 294 (311)
T 4agu_A 290 NIREI 294 (311)
T ss_dssp TCC--
T ss_pred hccCH
Confidence 76443
No 202
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.97 E-value=1.9e-31 Score=298.62 Aligned_cols=254 Identities=17% Similarity=0.210 Sum_probs=182.6
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.+ +|.|.||++.... .++.++.|+...... ........++...+...+|||++.+++....+...+
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~-- 78 (299)
T 2r3i_A 5 FQKVEKIGEGTYGVVYKARNKL----TGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLY-- 78 (299)
T ss_dssp EEEEEEEEECSSSEEEEEEETT----TCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE--
T ss_pred hhhhhhhccCCCeeEEEEEEcC----CCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceE--
Confidence 4444333 4789999997631 245556655432221 112234456677788889999998877655433333
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
.+|||+. ++|.+++.... ..++...++.++.||+.||+|||++||+||||||+||+++.++.+|
T Consensus 79 --------------lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~k 143 (299)
T 2r3i_A 79 --------------LVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 143 (299)
T ss_dssp --------------EEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred --------------EEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEE
Confidence 3799998 59999997653 4577889999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
++|||+++....+.
T Consensus 144 l~dfg~~~~~~~~~------------------------------------------------------------------ 157 (299)
T 2r3i_A 144 LADFGLARAFGVPV------------------------------------------------------------------ 157 (299)
T ss_dssp ECSTTHHHHHCCCS------------------------------------------------------------------
T ss_pred ECcchhhhhccCCc------------------------------------------------------------------
Confidence 99999987643100
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC-CCccccchhhhHHHHHHcCC
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV-CTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~t~~sDIwSLGvll~ell~~ 528 (1092)
.......||++|+|||.+.+.. ++.++|||||||+||||+++
T Consensus 158 -------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g 200 (299)
T 2r3i_A 158 -------------------------------------RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTR 200 (299)
T ss_dssp -------------------------------------BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS
T ss_pred -------------------------------------cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhC
Confidence 0011346799999999998855 79999999999999999985
Q ss_pred ---CCcHHHHHHHHHhccccCCC---------------CC------------CCCCChhHHHHHHhccccCCCCCCCHHH
Q 001366 529 ---FDSERALAAAMSDLRDRILP---------------PS------------FLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p---------------~~------------~~~~~~~~~~li~~lL~~dP~~Rpsa~e 578 (1092)
|.+...........+....| +. ....++.+.+|+.+||++||.+|||+.+
T Consensus 201 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ 280 (299)
T 2r3i_A 201 RALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 280 (299)
T ss_dssp SCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred CCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHH
Confidence 55544433333222210000 01 1235678899999999999999999999
Q ss_pred Hhhhhhhhhhhcc
Q 001366 579 ILQSEVTNEFQEV 591 (1092)
Q Consensus 579 iL~~~~~~~~~~~ 591 (1092)
+|+||||.....+
T Consensus 281 ~l~hp~~~~~~~~ 293 (299)
T 2r3i_A 281 ALAHPFFQDVTKP 293 (299)
T ss_dssp HHTSGGGTTCCCC
T ss_pred HhcChhhhcCCCC
Confidence 9999999876443
No 203
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.97 E-value=1.8e-31 Score=308.42 Aligned_cols=261 Identities=16% Similarity=0.186 Sum_probs=184.4
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||++... ..+..++.|+..............++..++...+||||+.+++.........
T Consensus 29 y~~~~~lG~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~--- 101 (364)
T 3qyz_A 29 YTNLSYIGEGAYGMVCSAYDN----LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ--- 101 (364)
T ss_dssp EEEEEEEEECSSEEEEEEEET----TTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTT---
T ss_pred EEEEEEeecCCCeEEEEEEEC----CCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccc---
Confidence 4444444 478999999652 1245566666543333333345567778888899999998766544222111
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
... ..++|+|++| +|.++++.. .++..+++.|+.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus 102 -~~~-------~~iv~e~~~~-~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~ 170 (364)
T 3qyz_A 102 -MKD-------VYIVQDLMET-DLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC 170 (364)
T ss_dssp -CCC-------EEEEEECCSE-EHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEEC
T ss_pred -cce-------EEEEEcccCc-CHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEE
Confidence 000 1237888885 999999765 47888999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++.......
T Consensus 171 Dfg~a~~~~~~~~------------------------------------------------------------------- 183 (364)
T 3qyz_A 171 DFGLARVADPDHD------------------------------------------------------------------- 183 (364)
T ss_dssp CCTTCEECCGGGC-------------------------------------------------------------------
T ss_pred eCcceEecCCCCC-------------------------------------------------------------------
Confidence 9999876441100
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC--
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR-- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~-- 528 (1092)
.....+..+||++|+|||++.+ ..++.++|||||||+||||+++
T Consensus 184 ---------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 230 (364)
T 3qyz_A 184 ---------------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230 (364)
T ss_dssp ---------------------------------BCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSC
T ss_pred ---------------------------------ccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCC
Confidence 0011225689999999998765 4589999999999999999985
Q ss_pred -CCcHHHHHHHHHhcc--cc-------------------CCC--------CCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001366 529 -FDSERALAAAMSDLR--DR-------------------ILP--------PSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1092)
Q Consensus 529 -f~~~~~~~~~~~~~~--~~-------------------~~p--------~~~~~~~~~~~~li~~lL~~dP~~Rpsa~e 578 (1092)
|.+............ .. .++ ..+...++.+.+|+.+||.+||.+|||+.|
T Consensus 231 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 310 (364)
T 3qyz_A 231 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310 (364)
T ss_dssp SSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 443321111111100 00 000 112456788999999999999999999999
Q ss_pred Hhhhhhhhhhhccc
Q 001366 579 ILQSEVTNEFQEVC 592 (1092)
Q Consensus 579 iL~~~~~~~~~~~~ 592 (1092)
+|+||||.......
T Consensus 311 ~l~hp~~~~~~~~~ 324 (364)
T 3qyz_A 311 ALAHPYLEQYYDPS 324 (364)
T ss_dssp HHTSGGGTTTCCGG
T ss_pred HhcCcchhhccCcc
Confidence 99999998764433
No 204
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.97 E-value=2.4e-31 Score=296.87 Aligned_cols=247 Identities=15% Similarity=0.089 Sum_probs=181.2
Q ss_pred hhccccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 218 TTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 218 ~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
-..+|.|.||+|.... .+..++.|++..... ........++..++...+|||++.+++......... ...
T Consensus 34 lg~G~~g~Vy~~~~~~----~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~-----~~~ 104 (290)
T 1t4h_A 34 IGRGSFKTVYKGLDTE----TTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK-----KCI 104 (290)
T ss_dssp EEECSSEEEEEEEETT----TCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSC-----EEE
T ss_pred ccCCCCeEEEEeEecC----CceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCC-----ceE
Confidence 3456889999997632 244455555433222 222334456677788889999998776533211100 001
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcC--ccccCCCCCCeEEc-cCCcEEEecc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG--VTFLDLKPSSFKLL-QSNQVKYIGP 373 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~g--IvHrDLKP~Nill~-~~~~vkl~Df 373 (1092)
.++|||++|++|.+++...+ .++...++.|+.||+.||.|||++| |+||||||+||+++ .++.+||+||
T Consensus 105 -------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Df 176 (290)
T 1t4h_A 105 -------VLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDL 176 (290)
T ss_dssp -------EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCT
T ss_pred -------EEEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeC
Confidence 13899999999999997754 4777799999999999999999999 99999999999998 7899999999
Q ss_pred cccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCC
Q 001366 374 IIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPH 453 (1092)
Q Consensus 374 g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 453 (1092)
|++......
T Consensus 177 g~~~~~~~~----------------------------------------------------------------------- 185 (290)
T 1t4h_A 177 GLATLKRAS----------------------------------------------------------------------- 185 (290)
T ss_dssp TGGGGCCTT-----------------------------------------------------------------------
T ss_pred CCccccccc-----------------------------------------------------------------------
Confidence 988543200
Q ss_pred CCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CC
Q 001366 454 SHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FD 530 (1092)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~ 530 (1092)
......||+.|+|||.+.+ .++.++|||||||++|+|+++ |.
T Consensus 186 ----------------------------------~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~ 230 (290)
T 1t4h_A 186 ----------------------------------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYS 230 (290)
T ss_dssp ----------------------------------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred ----------------------------------ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCC
Confidence 0013468999999998874 599999999999999999985 44
Q ss_pred cHHHHHHHHHhccccCCCCCC-CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 531 SERALAAAMSDLRDRILPPSF-LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 531 ~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
...........+.....++.+ ...++.+.+|+.+||++||.+|||+.|+|+||||++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~ 288 (290)
T 1t4h_A 231 ECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp TCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred CcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence 433344444444444444333 334578999999999999999999999999999976
No 205
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.97 E-value=2.4e-31 Score=304.04 Aligned_cols=245 Identities=18% Similarity=0.129 Sum_probs=178.6
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhh-hhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGA-MMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.+|.|.||++... ..+..++.|+...............+. .++....|||++.++.....+...+
T Consensus 61 ~G~~g~Vy~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~---------- 126 (340)
T 3an0_A 61 RGAYGVVEKMRHV----PSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW---------- 126 (340)
T ss_dssp ECSSEEEEEEEET----TTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEE----------
T ss_pred ccCCEEEEEEEEc----CCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEE----------
Confidence 3578999999752 225566776654333332333333333 3367789999998877655433322
Q ss_pred cccCCCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhhc-CccccCCCCCCeEEccCCcEEEeccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQ-GVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lHs~-gIvHrDLKP~Nill~~~~~vkl~Dfg 374 (1092)
++|||++| +|.+++.. .+..+++..++.|+.||+.||+|||++ ||+||||||+|||++.++.+||+|||
T Consensus 127 ------lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 199 (340)
T 3an0_A 127 ------ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG 199 (340)
T ss_dssp ------EEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCS
T ss_pred ------EEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCC
Confidence 38999987 99999864 456788889999999999999999997 99999999999999999999999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++......
T Consensus 200 ~~~~~~~~~----------------------------------------------------------------------- 208 (340)
T 3an0_A 200 ISGYLVDSV----------------------------------------------------------------------- 208 (340)
T ss_dssp HHHHHSCHH-----------------------------------------------------------------------
T ss_pred Cceeccccc-----------------------------------------------------------------------
Confidence 987643100
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC----CCCCccccchhhhHHHHHHcCC--
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG----GVCTTSSNIYSLGVLFFELFGR-- 528 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~----~~~t~~sDIwSLGvll~ell~~-- 528 (1092)
......||+.|+|||++.+ ..++.++|||||||+||||+++
T Consensus 209 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~ 255 (340)
T 3an0_A 209 ---------------------------------AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRF 255 (340)
T ss_dssp ---------------------------------HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSC
T ss_pred ---------------------------------ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCC
Confidence 0013468999999999754 4789999999999999999985
Q ss_pred -CCcHH-HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 529 -FDSER-ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 529 -f~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
|.... ........+............++.+.+|+.+||++||.+||++.|+|+||||....
T Consensus 256 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 318 (340)
T 3an0_A 256 PYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 318 (340)
T ss_dssp SSCCCSCHHHHHHHHHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHT
T ss_pred CCccccchHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhcCcCccccc
Confidence 44321 22222222222211111223578899999999999999999999999999998653
No 206
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=7.9e-29 Score=283.26 Aligned_cols=248 Identities=15% Similarity=0.181 Sum_probs=215.1
Q ss_pred cCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCc--eEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCC
Q 001366 826 SNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ--TVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE 903 (1092)
Q Consensus 826 ~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~--~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~ 903 (1092)
.|..+|.+++|+|+ +++|++++.|+.|++||+.+++ .+..+.+|...|.+++|+| ++.+|++++.|+.|++||+.+
T Consensus 6 ~~~~~i~~~~~s~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 6 FLVEPISCHAWNKD-RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp SCSSCCCEEEECTT-SSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEEEET
T ss_pred ccCCCeEEEEECCC-CCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEEEECCC
Confidence 47899999999998 8999999999999999999987 8889999999999999999 899999999999999999998
Q ss_pred CceeeeE---ecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCc---ceEEecCCCCCeEEEEEc-CCCEEEEEEC
Q 001366 904 KNSLATI---KNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA---PWCVLAGHEKAVSYVKFL-DSGTLVTAST 976 (1092)
Q Consensus 904 ~~~l~~l---~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~---~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~ 976 (1092)
++....+ .+...|.+++|+|++. +|++|+.|+.|++||++.... ......+|...|.+++|+ ++.+|++++.
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CeeeeeEEeecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 8755544 3678899999999985 899999999999999997653 223346789999999999 6678999999
Q ss_pred CCeEEEEEcCCCCCCC----------CCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeec
Q 001366 977 DNKLKLWDLKRTSHTG----------PSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKF 1046 (1092)
Q Consensus 977 Dg~I~vWDl~~~~~~~----------~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~ 1046 (1092)
|+.|++||++...... ...+.++..+.+|...|++++|+|++.+|++|+.|+.|++||+..++++..+.
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~- 241 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA- 241 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE-
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc-
Confidence 9999999976321110 12456788888999999999999999999999999999999999888776653
Q ss_pred cccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1047 GSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1047 ~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.|...|.+++|+|++.+|++| .||.|++|++
T Consensus 242 -------------~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~ 272 (372)
T 1k8k_C 242 -------------SETLPLLAVTFITESSLVAAG-HDCFPVLFTY 272 (372)
T ss_dssp -------------CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEE
T ss_pred -------------cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEc
Confidence 456789999999999988887 8999999986
No 207
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.97 E-value=9.5e-32 Score=325.81 Aligned_cols=243 Identities=16% Similarity=0.213 Sum_probs=182.8
Q ss_pred cccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
+|.|.||++... ..+..++.|+...... ........++..++...+||||+.++.....+...+
T Consensus 195 G~fG~Vy~a~~~----~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~---------- 260 (576)
T 2acx_A 195 GGFGEVCACQVR----ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC---------- 260 (576)
T ss_dssp ETTEEEEEEEET----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE----------
T ss_pred CCCEEEEEEEEC----CCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEE----------
Confidence 478999999763 2356666666532111 112233455667788889999998876655443333
Q ss_pred cccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
.+|||++||+|.++|...+ ..+++..++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++
T Consensus 261 ------lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~ 334 (576)
T 2acx_A 261 ------LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAV 334 (576)
T ss_dssp ------EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred ------EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccce
Confidence 3899999999999997654 348888999999999999999999999999999999999999999999999987
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
.....
T Consensus 335 ~~~~~--------------------------------------------------------------------------- 339 (576)
T 2acx_A 335 HVPEG--------------------------------------------------------------------------- 339 (576)
T ss_dssp ECCTT---------------------------------------------------------------------------
T ss_pred ecccC---------------------------------------------------------------------------
Confidence 64310
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH-
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER- 533 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~- 533 (1092)
......+||+.|+|||++.+..++.++|||||||+||||++| |....
T Consensus 340 -----------------------------~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~ 390 (576)
T 2acx_A 340 -----------------------------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK 390 (576)
T ss_dssp -----------------------------CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSS
T ss_pred -----------------------------ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccccc
Confidence 001245799999999999999999999999999999999986 44321
Q ss_pred --HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 534 --ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 534 --~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
........+.... +......++.+.+||.+||++||.+|| ++.||++||||...
T Consensus 391 ~~~~~~i~~~i~~~~-~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i 451 (576)
T 2acx_A 391 KIKREEVERLVKEVP-EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451 (576)
T ss_dssp CCCHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred chhHHHHHHHhhccc-ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence 1112222222111 111234578999999999999999999 78999999999864
No 208
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.97 E-value=8.8e-32 Score=306.74 Aligned_cols=254 Identities=14% Similarity=0.160 Sum_probs=184.0
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchh-hHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD-AALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
+..|.+...++ |.|.||++...+ .+..++.|++........ .....++..++...+|||++.+++........
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 99 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKD----TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRW 99 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETT----TCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECC----CCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEE
Confidence 44566555554 789999998632 345566666543333322 23345677778888999999887765543333
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~ 367 (1092)
+ ++|||++|++|.+++...+ .++...++.++.||+.||+|||++||+||||||+||+++.++.
T Consensus 100 ~----------------lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~ 162 (331)
T 4aaa_A 100 Y----------------LVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGV 162 (331)
T ss_dssp E----------------EEEECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSC
T ss_pred E----------------EEEecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCc
Confidence 3 3899999999999876554 4788899999999999999999999999999999999999999
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+||+|||+++......
T Consensus 163 ~kl~Dfg~~~~~~~~~---------------------------------------------------------------- 178 (331)
T 4aaa_A 163 VKLCDFGFARTLAAPG---------------------------------------------------------------- 178 (331)
T ss_dssp EEECCCTTC-----------------------------------------------------------------------
T ss_pred EEEEeCCCceeecCCc----------------------------------------------------------------
Confidence 9999999987643100
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHc
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell 526 (1092)
.......||++|+|||.+.+. .++.++|||||||+||||+
T Consensus 179 ---------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~ 219 (331)
T 4aaa_A 179 ---------------------------------------EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMF 219 (331)
T ss_dssp --------------------------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHH
Confidence 001145689999999999875 7899999999999999999
Q ss_pred CC---CCcHHHHHHHHHhcc--c------------------cCCC---------CCCCCCChhHHHHHHhccccCCCCCC
Q 001366 527 GR---FDSERALAAAMSDLR--D------------------RILP---------PSFLSENPKEAGFCLWQLHPEPLSRP 574 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~--~------------------~~~p---------~~~~~~~~~~~~li~~lL~~dP~~Rp 574 (1092)
++ |.............. . ..+| ..+...++.+.+|+.+||++||.+||
T Consensus 220 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 299 (331)
T 4aaa_A 220 MGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP 299 (331)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred hCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCC
Confidence 85 544433222211110 0 0111 01234578899999999999999999
Q ss_pred CHHHHhhhhhhhhh
Q 001366 575 TTREILQSEVTNEF 588 (1092)
Q Consensus 575 sa~eiL~~~~~~~~ 588 (1092)
|+.|+|+||||...
T Consensus 300 t~~ell~hp~f~~~ 313 (331)
T 4aaa_A 300 FCAELLHHDFFQMD 313 (331)
T ss_dssp CGGGGGGSHHHHGG
T ss_pred CHHHHhcCchhccC
Confidence 99999999999764
No 209
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=1.2e-31 Score=306.93 Aligned_cols=258 Identities=17% Similarity=0.206 Sum_probs=182.7
Q ss_pred HHHhhhcc--ccceeeeCCCCCcccccccccccccccccc----CchhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTT----MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
|.+.+.++ |.|+||++... ..+..++.|++.... .........++..++...+||||+.+++....+...
T Consensus 28 y~~~~~lG~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 103 (345)
T 3hko_A 28 YHLKGAIGQGSYGVVRVAIEN----QTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYI 103 (345)
T ss_dssp EEEEEEEEECSSCEEEEEEET----TTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred eeecceeeecCCeEEEEEEEC----CCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeE
Confidence 44544443 78999999652 224455555542211 112233445567778888999999987775533322
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhc---------------------------------------CCCCCH
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---------------------------------------GHKGKR 328 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~---------------------------------------~~~~~~ 328 (1092)
+ ++||||+|++|.++|... ...++.
T Consensus 104 ~----------------lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (345)
T 3hko_A 104 C----------------LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQRE 167 (345)
T ss_dssp E----------------EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHH
T ss_pred E----------------EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccH
Confidence 2 389999999999999521 112345
Q ss_pred HHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC--cEEEecccccccccccccCCCCCCchhhhhcccccccccc
Q 001366 329 IECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN--QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFT 406 (1092)
Q Consensus 329 ~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~--~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 406 (1092)
..++.|+.||+.||+|||++||+||||||+||+++.++ .+||+|||+++.+......
T Consensus 168 ~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~--------------------- 226 (345)
T 3hko_A 168 KLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG--------------------- 226 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC---------------------
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCcc---------------------
Confidence 67889999999999999999999999999999998776 8999999998765421000
Q ss_pred ccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccc
Q 001366 407 TGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQS 486 (1092)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (1092)
..
T Consensus 227 ------------------------------------------------------------------------------~~ 228 (345)
T 3hko_A 227 ------------------------------------------------------------------------------EY 228 (345)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred cccccccccccccCcccccC--CCCCccccchhhhHHHHHHcCC---CCcHHHHHHHHHhccccC--CCCCCCCCChhHH
Q 001366 487 TSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRI--LPPSFLSENPKEA 559 (1092)
Q Consensus 487 ~~~~~~~gt~~Y~aPE~l~~--~~~t~~sDIwSLGvll~ell~~---f~~~~~~~~~~~~~~~~~--~p~~~~~~~~~~~ 559 (1092)
.......||+.|+|||++.+ ..++.++|||||||+||||+++ |............+.... ..+.+...++.+.
T Consensus 229 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (345)
T 3hko_A 229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLAR 308 (345)
T ss_dssp ------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHH
T ss_pred ccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHH
Confidence 01125578999999999976 6789999999999999999985 544333333333333222 2233445688999
Q ss_pred HHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 560 GFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 560 ~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
+|+.+||.+||.+||++.++|+||||.+..+
T Consensus 309 ~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~ 339 (345)
T 3hko_A 309 DLLSNLLNRNVDERFDAMRALQHPWISQFSD 339 (345)
T ss_dssp HHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred HHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence 9999999999999999999999999987643
No 210
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.97 E-value=2e-31 Score=301.20 Aligned_cols=252 Identities=15% Similarity=0.124 Sum_probs=179.4
Q ss_pred CchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCch-hhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 210 GFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 210 ~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
.+..|.+.+.++ |.|.||++... +..++.|++....... ......++..++...+|||++.++........
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 108 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEWH------GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN 108 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET------TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred ChhHceeeeEeecCCCeEEEEEEEC------CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence 345666666555 78999999652 3456666654433222 22344567777888899999988776543332
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHhhhcC--ccccCCCCCCeEE
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH--KGKRIECLYIFRQIVALVDYHHTQG--VTFLDLKPSSFKL 362 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~--~~~~~~~~~i~~qil~~l~~lHs~g--IvHrDLKP~Nill 362 (1092)
.+ ++|||++|++|.+++...+. .++..+++.++.||+.||+|||++| |+||||||+|||+
T Consensus 109 ~~----------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll 172 (309)
T 3p86_A 109 LS----------------IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV 172 (309)
T ss_dssp CE----------------EEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEE
T ss_pred eE----------------EEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEE
Confidence 22 38999999999999976542 3788899999999999999999999 9999999999999
Q ss_pred ccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccC
Q 001366 363 LQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETAN 442 (1092)
Q Consensus 363 ~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1092)
+.++.+||+|||+++......
T Consensus 173 ~~~~~~kL~Dfg~a~~~~~~~----------------------------------------------------------- 193 (309)
T 3p86_A 173 DKKYTVKVCDFGLSRLKASTF----------------------------------------------------------- 193 (309)
T ss_dssp CTTCCEEECCCC--------------------------------------------------------------------
T ss_pred eCCCcEEECCCCCCccccccc-----------------------------------------------------------
Confidence 999999999999987533100
Q ss_pred ccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHH
Q 001366 443 ESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLF 522 (1092)
Q Consensus 443 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll 522 (1092)
.......||+.|+|||++.+..++.++|||||||+|
T Consensus 194 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 229 (309)
T 3p86_A 194 --------------------------------------------LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVIL 229 (309)
T ss_dssp ----------------------------------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCCccccChhhhcCCCCCchhhHHHHHHHH
Confidence 001145789999999999999999999999999999
Q ss_pred HHHcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh--hhhhh
Q 001366 523 FELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ--SEVTN 586 (1092)
Q Consensus 523 ~ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~--~~~~~ 586 (1092)
|||+++ |..................++.....++.+.+|+.+||+.||.+|||+.+|++ .+++.
T Consensus 230 ~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 230 WELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298 (309)
T ss_dssp HHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 999985 44333222222221122222233455789999999999999999999999998 34544
No 211
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.97 E-value=1.7e-31 Score=315.62 Aligned_cols=248 Identities=16% Similarity=0.112 Sum_probs=172.8
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCch-hhHhhhhhhhhhc---cCCCCCCCccccceecCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVA---SNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 287 (1092)
|.+.+.+ +|.|.||++.... .+..++.|+........ .....++....+. ...|+|++.++.........
T Consensus 99 y~~~~~LG~G~fg~V~~a~~~~----~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 99 YEVLKVIGKGSFGQVVKAYDHK----VHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp EEEEEEEEESSSEEEEEEEETT----TTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred EEEEEEcccCccEEEEEEEECC----CCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 4444444 4789999996522 24566666653321111 1111122222222 23677888776665543333
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~ 366 (1092)
+ .+|||+. ++|.+++.... ..++...++.|+.||+.||+|||++||+||||||+||||+.++
T Consensus 175 ~----------------lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~ 237 (429)
T 3kvw_A 175 C----------------MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQG 237 (429)
T ss_dssp E----------------EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTT
T ss_pred E----------------EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCC
Confidence 3 3788886 59999997654 3488889999999999999999999999999999999999988
Q ss_pred c--EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 367 Q--VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 367 ~--vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
. +||+|||+++....
T Consensus 238 ~~~vkL~DFG~a~~~~~--------------------------------------------------------------- 254 (429)
T 3kvw_A 238 RSGIKVIDFGSSCYEHQ--------------------------------------------------------------- 254 (429)
T ss_dssp SCCEEECCCTTCEETTC---------------------------------------------------------------
T ss_pred CcceEEeecccceecCC---------------------------------------------------------------
Confidence 7 99999998865320
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~e 524 (1092)
.....+||++|+|||++.+..++.++|||||||+|||
T Consensus 255 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e 291 (429)
T 3kvw_A 255 -------------------------------------------RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAE 291 (429)
T ss_dssp -------------------------------------------CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHH
Confidence 0114578999999999999999999999999999999
Q ss_pred HcCC---CCcHHHHHHHHHhccccCCC-------------------------------------------------CC--
Q 001366 525 LFGR---FDSERALAAAMSDLRDRILP-------------------------------------------------PS-- 550 (1092)
Q Consensus 525 ll~~---f~~~~~~~~~~~~~~~~~~p-------------------------------------------------~~-- 550 (1092)
|+++ |.+................| +.
T Consensus 292 lltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (429)
T 3kvw_A 292 LLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESR 371 (429)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCS
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccch
Confidence 9986 44433322221111100000 00
Q ss_pred ------CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 551 ------FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 551 ------~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
....++.+.+||.+||++||.+|||+.|+|+||||...
T Consensus 372 ~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~ 415 (429)
T 3kvw_A 372 EWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR 415 (429)
T ss_dssp CHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred hhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence 01236778999999999999999999999999999875
No 212
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.97 E-value=3.4e-31 Score=301.37 Aligned_cols=253 Identities=13% Similarity=0.127 Sum_probs=183.3
Q ss_pred hhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 212 ~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
..|.+.+.++ |.|.||+|.....-. .+..++.|+..............++..++...+||||+.++.........+
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~- 126 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQ-RDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM- 126 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTS-CCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE-
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCC-CCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE-
Confidence 3455555554 789999998632100 122355555533222333344566777888889999998777644322222
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
++|||++|++|.++++.....++..+++.|+.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 127 ---------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~k 191 (325)
T 3kul_A 127 ---------------IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCK 191 (325)
T ss_dssp ---------------EEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEE
T ss_pred ---------------EEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEE
Confidence 38999999999999987766788889999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+++........
T Consensus 192 l~Dfg~a~~~~~~~~~---------------------------------------------------------------- 207 (325)
T 3kul_A 192 VSDFGLSRVLEDDPDA---------------------------------------------------------------- 207 (325)
T ss_dssp ECCCSSCEECC----C----------------------------------------------------------------
T ss_pred ECCCCcccccccCccc----------------------------------------------------------------
Confidence 9999999875421000
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~ 528 (1092)
........+|+.|+|||++.+..++.++|||||||+||||++ +
T Consensus 208 ------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g 251 (325)
T 3kul_A 208 ------------------------------------AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG 251 (325)
T ss_dssp ------------------------------------CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred ------------------------------------eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 000113356788999999998999999999999999999998 5
Q ss_pred ---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|....... ....+.....++.....++.+.+|+.+||+.||.+|||+.+|++.
T Consensus 252 ~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~ 307 (325)
T 3kul_A 252 ERPYWNMTNRD-VISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSV 307 (325)
T ss_dssp CCTTTTSCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCcccCCHHH-HHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 33322222 222233333334445668889999999999999999999999874
No 213
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.97 E-value=1.7e-31 Score=304.08 Aligned_cols=250 Identities=16% Similarity=0.065 Sum_probs=176.3
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||+|.....-......++.|...............++..++...+|||++.++.........
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~---- 92 (327)
T 3poz_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ---- 92 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEE----
T ss_pred cccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeE----
Confidence 4444433 4899999997522100001112333332222222334455667778888999999887765432211
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
.+++|+.+++|.+++......++..+++.|+.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus 93 -------------~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~ 159 (327)
T 3poz_A 93 -------------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKIT 159 (327)
T ss_dssp -------------EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEEC
T ss_pred -------------EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEc
Confidence 2799999999999998877778888999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++.......
T Consensus 160 Dfg~a~~~~~~~~------------------------------------------------------------------- 172 (327)
T 3poz_A 160 DFGLAKLLGAEEK------------------------------------------------------------------- 172 (327)
T ss_dssp CTTHHHHHTTTCC-------------------------------------------------------------------
T ss_pred cCcceeEccCCcc-------------------------------------------------------------------
Confidence 9999987541100
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C--
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R-- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~-- 528 (1092)
........||..|+|||++.+..++.++|||||||+||||++ +
T Consensus 173 ----------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~ 218 (327)
T 3poz_A 173 ----------------------------------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 218 (327)
T ss_dssp -----------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred ----------------------------------cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCC
Confidence 000113456888999999999999999999999999999998 5
Q ss_pred -CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 -FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 -f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|..... ......+.....++.....++.+..|+.+||+.||.+||++.+++++
T Consensus 219 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 272 (327)
T 3poz_A 219 PYDGIPA-SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp TTTTCCG-GGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred CccCCCH-HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 332211 11122222222333444567889999999999999999999999986
No 214
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.97 E-value=9.1e-32 Score=317.12 Aligned_cols=249 Identities=18% Similarity=0.189 Sum_probs=175.1
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCc-------hhhHhhhhhhhhhccCCCCCCCccccceecC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-------SDAALKAAGAMMVASNASPKPVGVGTAVVSN 284 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (1092)
|.+.+.+ +|.|.||++.... .+..++.|+....... .......++..++...+||||+.++.....+
T Consensus 137 y~~~~~LG~G~~g~V~~a~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 212 (419)
T 3i6u_A 137 YIMSKTLGSGACGEVKLAFERK----TCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 212 (419)
T ss_dssp EEEEEEEEECSSSEEEEEEETT----TCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS
T ss_pred EEEEeEEeeCCCeEEEEEEECC----CCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 4444444 4789999997532 2455666654322110 1111234566778888999999876653211
Q ss_pred CCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc
Q 001366 285 GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~ 364 (1092)
. . ..+|||++|++|.+++...+ .++..+++.|+.||+.||+|||++||+||||||+||||+.
T Consensus 213 ~-~----------------~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~ 274 (419)
T 3i6u_A 213 D-Y----------------YIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 274 (419)
T ss_dssp E-E----------------EEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESS
T ss_pred c-e----------------EEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEec
Confidence 1 1 13899999999999997654 5778899999999999999999999999999999999976
Q ss_pred CC---cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 365 SN---QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 365 ~~---~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
.+ .+||+|||+++.....
T Consensus 275 ~~~~~~~kl~DFG~a~~~~~~----------------------------------------------------------- 295 (419)
T 3i6u_A 275 QEEDCLIKITDFGHSKILGET----------------------------------------------------------- 295 (419)
T ss_dssp SSSSCCEEECCSSTTTSCC-------------------------------------------------------------
T ss_pred CCCcceEEEeecccceecCCC-----------------------------------------------------------
Confidence 54 4999999998764310
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC---CCCCccccchhh
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---GVCTTSSNIYSL 518 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~---~~~t~~sDIwSL 518 (1092)
......+||+.|+|||++.+ ..++.++|||||
T Consensus 296 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Diwsl 330 (419)
T 3i6u_A 296 ---------------------------------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 330 (419)
T ss_dssp ------------------------------------------------------CTTCCTTTTC----CTTHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCCCCccCceeeecCCCCCCCchhhhHhH
Confidence 00114579999999999864 668899999999
Q ss_pred hHHHHHHcCC---CCcHHH---HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 519 GVLFFELFGR---FDSERA---LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 519 Gvll~ell~~---f~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
||+||||+++ |..... ....+........|+.+...++.+.+|+.+||++||.+|||+.|+|+||||.+.
T Consensus 331 G~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 331 GVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406 (419)
T ss_dssp HHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred HHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence 9999999986 432211 222222222222333445678899999999999999999999999999999764
No 215
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.97 E-value=2.2e-31 Score=306.47 Aligned_cols=254 Identities=15% Similarity=0.117 Sum_probs=180.9
Q ss_pred HHHhhhc--cccceeeeCCCCCc-cccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNA-FKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 289 (1092)
|.+.+.+ +|.|+||++...+. ....+..++.|+..............++...+... .||||+.++.........
T Consensus 24 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~-- 101 (359)
T 3vhe_A 24 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP-- 101 (359)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC--
T ss_pred eeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCc--
Confidence 4444444 58999999963110 01224566666654333333333445555556666 789999877764432211
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCC---------------------------------------------
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH--------------------------------------------- 324 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~--------------------------------------------- 324 (1092)
..++||||+||+|.++|.....
T Consensus 102 -------------~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (359)
T 3vhe_A 102 -------------LMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV 168 (359)
T ss_dssp -------------CEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------
T ss_pred -------------eEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccc
Confidence 1137999999999999976532
Q ss_pred --------------------CCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccccccc
Q 001366 325 --------------------KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESAS 384 (1092)
Q Consensus 325 --------------------~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~ 384 (1092)
.++..+++.|+.||+.||.|||++||+||||||+||||+.++.+||+|||+++.+.....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ---------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred cccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 178889999999999999999999999999999999999999999999999876431000
Q ss_pred CCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccccccc
Q 001366 385 LDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTN 464 (1092)
Q Consensus 385 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 464 (1092)
T Consensus 249 -------------------------------------------------------------------------------- 248 (359)
T 3vhe_A 249 -------------------------------------------------------------------------------- 248 (359)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHHHHHHH
Q 001366 465 AGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMS 540 (1092)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~~~~~~ 540 (1092)
........||+.|+|||++.+..++.++|||||||+||||++ + |...........
T Consensus 249 ---------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~ 307 (359)
T 3vhe_A 249 ---------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 307 (359)
T ss_dssp ---------------------CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH
T ss_pred ---------------------chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHH
Confidence 000114568899999999999999999999999999999997 5 433222222333
Q ss_pred hccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 541 ~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
.+.....++.....++.+.+|+.+||++||.+|||+.|+++|-
T Consensus 308 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 350 (359)
T 3vhe_A 308 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350 (359)
T ss_dssp HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence 3333333333445678999999999999999999999999873
No 216
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.97 E-value=3.7e-31 Score=297.26 Aligned_cols=242 Identities=16% Similarity=0.138 Sum_probs=183.7
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+|.|.||+|... ..+..++.|++.............++..++....|||++.++.....+...+
T Consensus 33 G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~------------ 96 (303)
T 3a7i_A 33 GSFGEVFKGIDN----RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLW------------ 96 (303)
T ss_dssp CSSSEEEEEEET----TTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE------------
T ss_pred cCCeEEEEEEEC----CCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEE------------
Confidence 478999999642 1245566666544333333445556667788889999998777655433322
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
++|||++|++|.+++... .++..+++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 97 ----lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 170 (303)
T 3a7i_A 97 ----IIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170 (303)
T ss_dssp ----EEEECCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred ----EEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecC
Confidence 389999999999999753 57888999999999999999999999999999999999999999999999887644
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
...
T Consensus 171 ~~~----------------------------------------------------------------------------- 173 (303)
T 3a7i_A 171 DTQ----------------------------------------------------------------------------- 173 (303)
T ss_dssp TTB-----------------------------------------------------------------------------
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 100
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHHH
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAA 537 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~~ 537 (1092)
.......||+.|+|||.+.+..++.++|||||||+||||+++ |........
T Consensus 174 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 227 (303)
T 3a7i_A 174 --------------------------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV 227 (303)
T ss_dssp --------------------------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred --------------------------cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHH
Confidence 001145689999999999999999999999999999999986 332222221
Q ss_pred HHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 538 AMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 538 ~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
. ..+.....+......++.+.+|+.+||++||.+|||+.++|+||||...
T Consensus 228 ~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 277 (303)
T 3a7i_A 228 L-FLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 277 (303)
T ss_dssp H-HHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred H-HHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence 1 1222222233334557889999999999999999999999999999764
No 217
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.97 E-value=3.4e-31 Score=300.60 Aligned_cols=257 Identities=14% Similarity=0.100 Sum_probs=176.6
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+.+.+ +|.|.||+|.... .+..++.|++..... ......++...+... .|||++.++..........
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~- 97 (326)
T 2x7f_A 25 IFELVELVGNGTYGQVYKGRHVK----TGQLAAIKVMDVTGD--EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG- 97 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETT----TCCEEEEEEEECCSS--TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C-
T ss_pred cEEEEEEeccCCCEEEEEEEECC----CCCeEEEEEEecCcc--cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc-
Confidence 34444444 3789999997621 245566666532221 222333444445554 8999998877655432111
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
.... ..++|||++|++|.+++... +..++...++.++.||+.||.|||++||+||||||+||+++.++.+
T Consensus 98 --~~~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 98 --MDDQ-------LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp --CCCE-------EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCE
T ss_pred --ccce-------EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCE
Confidence 0011 12489999999999999764 3467888999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||++.......
T Consensus 169 kl~Dfg~~~~~~~~~----------------------------------------------------------------- 183 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTV----------------------------------------------------------------- 183 (326)
T ss_dssp EECCCTTTC-----------------------------------------------------------------------
T ss_pred EEeeCcCceecCcCc-----------------------------------------------------------------
Confidence 999999886643100
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc-----CCCCCccccchhhhHHHH
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS-----GGVCTTSSNIYSLGVLFF 523 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-----~~~~t~~sDIwSLGvll~ 523 (1092)
.......||+.|+|||++. +..++.++|||||||+||
T Consensus 184 --------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~ 225 (326)
T 2x7f_A 184 --------------------------------------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAI 225 (326)
T ss_dssp ---------------------------------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHH
T ss_pred --------------------------------------cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHH
Confidence 0011346899999999997 467899999999999999
Q ss_pred HHcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 524 ELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 524 ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
||+++ |.........................++.+.+|+.+||++||.+||++.++|+||||...
T Consensus 226 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~ 293 (326)
T 2x7f_A 226 EMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ 293 (326)
T ss_dssp HHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred HHHhCCCCCCCCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence 99986 433333333222222222222234457889999999999999999999999999999764
No 218
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.97 E-value=2.6e-31 Score=311.74 Aligned_cols=254 Identities=16% Similarity=0.147 Sum_probs=168.5
Q ss_pred hhccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 218 TTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 218 ~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
-..++.|.||++...+. ..+..++.|+...... .....++..++...+||||+.++..........
T Consensus 29 lG~G~~g~Vy~~~~~~~--~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~--------- 94 (405)
T 3rgf_A 29 VGRGTYGHVYKAKRKDG--KDDKDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRK--------- 94 (405)
T ss_dssp CC-----EEEEEEESSS--SCCCCEEEEECSSSSC---CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE---------
T ss_pred eeecCCeEEEEEEEccC--CCCeEEEEEEECCCCC---CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe---------
Confidence 34567899999985321 1245566665533222 223456777888889999998777654211111
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcC--------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE----ccC
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARG--------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL----LQS 365 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~--------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill----~~~ 365 (1092)
..++|||++| +|.+++.... ..++..+++.|++||+.||+|||++||+||||||+|||| +..
T Consensus 95 -----~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~ 168 (405)
T 3rgf_A 95 -----VWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPER 168 (405)
T ss_dssp -----EEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTT
T ss_pred -----EEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCC
Confidence 0137888875 8988885321 237888999999999999999999999999999999999 677
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+.+||+|||+++.......
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~------------------------------------------------------------- 187 (405)
T 3rgf_A 169 GRVKIADMGFARLFNSPLK------------------------------------------------------------- 187 (405)
T ss_dssp TCEEECCTTCCC--------------------------------------------------------------------
T ss_pred CcEEEEECCCceecCCCCc-------------------------------------------------------------
Confidence 8999999999976541100
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~e 524 (1092)
........+||++|+|||++.+ ..++.++|||||||+|||
T Consensus 188 ---------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~e 228 (405)
T 3rgf_A 188 ---------------------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAE 228 (405)
T ss_dssp ------------------------------------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------ccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHH
Confidence 0011225689999999999988 458999999999999999
Q ss_pred HcCC---CCcHH------------HHHHHHHhccccCCCC----------------------------------CCCCCC
Q 001366 525 LFGR---FDSER------------ALAAAMSDLRDRILPP----------------------------------SFLSEN 555 (1092)
Q Consensus 525 ll~~---f~~~~------------~~~~~~~~~~~~~~p~----------------------------------~~~~~~ 555 (1092)
|+++ |.+.. .....+..+ ..+.+. .....+
T Consensus 229 ll~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~-g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (405)
T 3rgf_A 229 LLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM-GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPD 307 (405)
T ss_dssp HHHSSCTTCCCC------CCCCHHHHHHHHHHH-CCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTT
T ss_pred HHhCCCCCCCccccccccccchHHHHHHHHHhh-CCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCC
Confidence 9986 43221 111111111 100000 011226
Q ss_pred hhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhccc
Q 001366 556 PKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQEVC 592 (1092)
Q Consensus 556 ~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~~~ 592 (1092)
+.+.+||.+||++||.+|||+.|+|+||||.+.+.+.
T Consensus 308 ~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~~~ 344 (405)
T 3rgf_A 308 SKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPT 344 (405)
T ss_dssp SHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSCCC
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhcChhhccCCCCc
Confidence 6788999999999999999999999999998765443
No 219
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.97 E-value=2.1e-31 Score=298.54 Aligned_cols=258 Identities=13% Similarity=0.135 Sum_probs=170.9
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.++ |.|.||++.... .+..++.|+..............++...+...+|||++.++.........+
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~--- 89 (303)
T 2vwi_A 17 YELQEVIGSGATAVVQAAYCAP----KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW--- 89 (303)
T ss_dssp CEEEEECC---CCCEEEEEC--------CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEE---
T ss_pred hhhhheeccccceEEEEEEECC----CCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE---
Confidence 44444443 679999997621 245566665533322233334456667777889999998876655333222
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhh-------cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNA-------RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~-------~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~ 364 (1092)
++|||++|++|.+++.. ....++..+++.++.||+.||.|||++||+||||||+||+++.
T Consensus 90 -------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~ 156 (303)
T 2vwi_A 90 -------------LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGE 156 (303)
T ss_dssp -------------EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT
T ss_pred -------------EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcC
Confidence 38999999999999964 2345788899999999999999999999999999999999999
Q ss_pred CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 365 ~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
++.+||+|||+++........
T Consensus 157 ~~~~kl~dfg~~~~~~~~~~~----------------------------------------------------------- 177 (303)
T 2vwi_A 157 DGSVQIADFGVSAFLATGGDI----------------------------------------------------------- 177 (303)
T ss_dssp TCCEEECCCHHHHHCC----------------------------------------------------------------
T ss_pred CCCEEEEeccchheeccCCCc-----------------------------------------------------------
Confidence 999999999998764411000
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFF 523 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ 523 (1092)
..........||+.|+|||.+.+ ..++.++|||||||+||
T Consensus 178 ---------------------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~ 218 (303)
T 2vwi_A 178 ---------------------------------------TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAI 218 (303)
T ss_dssp -------------------------------------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHH
T ss_pred ---------------------------------------cchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHH
Confidence 00000114578999999999876 56899999999999999
Q ss_pred HHcCC---CCcHHHHHHHHHhccccC--C------CCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 524 ELFGR---FDSERALAAAMSDLRDRI--L------PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 524 ell~~---f~~~~~~~~~~~~~~~~~--~------p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
||+++ |.........+..+.... + +......++.+.+|+.+||++||.+||++.++++||||....
T Consensus 219 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 295 (303)
T 2vwi_A 219 ELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295 (303)
T ss_dssp HHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred HHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence 99986 433222222222222111 0 112234567889999999999999999999999999998653
No 220
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.97 E-value=2.2e-31 Score=294.40 Aligned_cols=254 Identities=14% Similarity=0.072 Sum_probs=185.3
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
+|.+.+.+ ++.|.||++... ..+..++.|+..............++..++...+|||++.++.........+
T Consensus 8 ~y~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~-- 81 (276)
T 2yex_A 8 DWDLVQTLGEGAYGEVQLAVNR----VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY-- 81 (276)
T ss_dssp HEEEEEEEEECSSSEEEEEEET----TTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE--
T ss_pred ceEEEEEeecCCCcEEEEEEEC----CCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEE--
Confidence 34444444 478999999752 1245566666543333333344556666778889999998776654333222
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
++|||++|++|.+++.... .++..+++.++.||+.||+|||++||+||||||+||+++.++.+|+
T Consensus 82 --------------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl 146 (276)
T 2yex_A 82 --------------LFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKI 146 (276)
T ss_dssp --------------EEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred --------------EEEEecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEE
Confidence 3899999999999997543 4778899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++.......
T Consensus 147 ~dfg~~~~~~~~~~------------------------------------------------------------------ 160 (276)
T 2yex_A 147 SDFGLATVFRYNNR------------------------------------------------------------------ 160 (276)
T ss_dssp CCCTTCEECEETTE------------------------------------------------------------------
T ss_pred eeCCCccccCCCcc------------------------------------------------------------------
Confidence 99998876431000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC-CccccchhhhHHHHHHcCC-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-t~~sDIwSLGvll~ell~~- 528 (1092)
........||+.|+|||.+.+..+ +.++|||||||++|||+++
T Consensus 161 -----------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 205 (276)
T 2yex_A 161 -----------------------------------ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205 (276)
T ss_dssp -----------------------------------ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSS
T ss_pred -----------------------------------hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCC
Confidence 000124578999999999988665 7899999999999999985
Q ss_pred --CCcHHHHHHHHHhc-cccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 529 --FDSERALAAAMSDL-RDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|.........+... ......+.+...++.+.+|+.+||++||.+|||+.|+++||||...
T Consensus 206 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (276)
T 2yex_A 206 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268 (276)
T ss_dssp CCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred CCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccCh
Confidence 43322211111111 1122223344567889999999999999999999999999999865
No 221
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.97 E-value=3.4e-31 Score=320.12 Aligned_cols=244 Identities=16% Similarity=0.148 Sum_probs=181.4
Q ss_pred cccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
+|.|.||++... ..+..++.|+....... .......++..++...+||+|+.++.........+
T Consensus 196 G~fG~Vy~a~~~----~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~---------- 261 (543)
T 3c4z_A 196 GGFGEVFACQMK----ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLC---------- 261 (543)
T ss_dssp CSSSEEEEEEET----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE----------
T ss_pred CCCeEEEEEEEC----CCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEE----------
Confidence 478999999762 23556666655322111 11233445666778889999998777655443333
Q ss_pred cccCCCcccccCCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARG---HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~---~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
.+|||++||+|.++|...+ ..+++..++.|+.||+.||+|||++||+||||||+||||+.+|.+||+|||+
T Consensus 262 ------lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGl 335 (543)
T 3c4z_A 262 ------LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGL 335 (543)
T ss_dssp ------EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred ------EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecce
Confidence 3899999999999997643 3588889999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++.+....
T Consensus 336 a~~~~~~~------------------------------------------------------------------------ 343 (543)
T 3c4z_A 336 AVELKAGQ------------------------------------------------------------------------ 343 (543)
T ss_dssp CEECCTTC------------------------------------------------------------------------
T ss_pred eeeccCCC------------------------------------------------------------------------
Confidence 87643100
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcH
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
......+||++|+|||++.+..|+.++|||||||+||||+++ |...
T Consensus 344 -------------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 344 -------------------------------TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp -------------------------------CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred -------------------------------cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 001145799999999999999999999999999999999986 5432
Q ss_pred H---HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC-----HHHHhhhhhhhhh
Q 001366 533 R---ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-----TREILQSEVTNEF 588 (1092)
Q Consensus 533 ~---~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-----a~eiL~~~~~~~~ 588 (1092)
. ........+.... +......++.+.+||.+||++||.+||+ +.+|++||||...
T Consensus 393 ~~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i 455 (543)
T 3c4z_A 393 GEKVENKELKQRVLEQA-VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455 (543)
T ss_dssp TCCCCHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred ccchhHHHHHHHHhhcc-cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence 1 1122222222111 1112345788999999999999999996 5899999999864
No 222
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=4e-30 Score=295.87 Aligned_cols=251 Identities=14% Similarity=0.133 Sum_probs=199.8
Q ss_pred cCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCC--ceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCC
Q 001366 826 SNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG--QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE 903 (1092)
Q Consensus 826 ~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg--~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~ 903 (1092)
.+..+|++++|+|+ +++|++|+.|++|+|||+.++ +.+..+.+|...|++++|+| ++.+|++|+.|++|++||+.+
T Consensus 9 ~~~~~v~~~~~s~~-g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQ-RTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAP-KSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp ECSSCCSCCEECSS-SSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECT-TTCCEEEEETTSSEEEC----
T ss_pred cCCCcEEEEEECCC-CCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeC-CCCEEEEEeCCCeEEEEEcCC
Confidence 35789999999998 899999999999999999988 77888999999999999999 889999999999999999998
Q ss_pred Cc---eeeeE-ecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCc--ceEEecC-CCCCeEEEEEc-CCCEEEEEE
Q 001366 904 KN---SLATI-KNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA--PWCVLAG-HEKAVSYVKFL-DSGTLVTAS 975 (1092)
Q Consensus 904 ~~---~l~~l-~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~--~~~~l~~-H~~~V~~v~fs-~~~~L~Sgs 975 (1092)
+. ....+ .+...|.+++|+|++. +|++|+.|+.|++||+++.+. ....+.+ |...|.+++|+ ++.+|++++
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNED-KFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSS-CCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred CCceeeeeEecccCCceEEEEECCCCC-EEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence 87 34443 3778999999999985 899999999999999998753 3566677 99999999999 667899999
Q ss_pred CCCeEEEEEcCCCCCCCC----------CCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeee
Q 001366 976 TDNKLKLWDLKRTSHTGP----------STNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYK 1045 (1092)
Q Consensus 976 ~Dg~I~vWDl~~~~~~~~----------~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~ 1045 (1092)
.|++|++||+........ ..+.++..+ +|...|++++|+|++.+|++|+.|+.|++||+..++.....
T Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~- 243 (377)
T 3dwl_C 166 ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRA- 243 (377)
T ss_dssp SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEE-
T ss_pred CCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCccee-
Confidence 999999999964321110 124456666 89999999999999999999999999999999887652110
Q ss_pred ccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1046 FGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1046 ~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.....+|...|.+++|+|++.+|++|+.|+.+ +|+.
T Consensus 244 ---------~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~ 279 (377)
T 3dwl_C 244 ---------LITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQG 279 (377)
T ss_dssp ---------CCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECC
T ss_pred ---------eEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEe
Confidence 01224678889999999999999999877666 6653
No 223
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.97 E-value=7.1e-32 Score=313.43 Aligned_cols=261 Identities=13% Similarity=0.012 Sum_probs=175.3
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhh---hhhccCCCCCCCccccceecCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGA---MMVASNASPKPVGVGTAVVSNG 285 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 285 (1092)
.|.+.+.++ |.|.||+|... ..+..++.|+...... ........++. +++...+||||+.++.......
T Consensus 74 ~y~~~~~lG~G~~g~V~~a~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~ 149 (377)
T 3byv_A 74 TLVRGTVLGQEDPYAYLEATDQ----ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 149 (377)
T ss_dssp EEEEEEEEEEETTEEEEEEEC-----CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCS
T ss_pred eEEEcceeecCCCEEEEEEEEC----CCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhh
Confidence 455555554 78999999862 2256667766542211 11222223333 5677779999987653221100
Q ss_pred CCCCCccCCC----------CCccccCCCcccccCCCCCHHHHHhhcCCCCC------HHHHHHHHHHHHHHHHHhhhcC
Q 001366 286 SLDLGARTGV----------PASCWIGGLRQGSSDHGVNLREWLNARGHKGK------RIECLYIFRQIVALVDYHHTQG 349 (1092)
Q Consensus 286 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~------~~~~~~i~~qil~~l~~lHs~g 349 (1092)
... ...+. ...+..-...+|||+ +|+|.++|...+.... ...++.|+.||+.||+|||++|
T Consensus 150 ~~~--~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 226 (377)
T 3byv_A 150 DLV--KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG 226 (377)
T ss_dssp EEE--ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhh--hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence 000 00000 000000012478999 6799999976544333 4678889999999999999999
Q ss_pred ccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCccccccccc
Q 001366 350 VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSL 429 (1092)
Q Consensus 350 IvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (1092)
|+||||||+||||+.++.+||+|||+++....
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~------------------------------------------------ 258 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA------------------------------------------------ 258 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTC------------------------------------------------
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCC------------------------------------------------
Confidence 99999999999999999999999999875220
Q ss_pred ccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC--
Q 001366 430 FPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-- 507 (1092)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-- 507 (1092)
..+..+| +.|+|||++.+.
T Consensus 259 ----------------------------------------------------------~~~~~~g-~~y~aPE~~~~~~~ 279 (377)
T 3byv_A 259 ----------------------------------------------------------RVVSSVS-RGFEPPELEARRAT 279 (377)
T ss_dssp ----------------------------------------------------------EEECCCC-TTCCCHHHHHHHTS
T ss_pred ----------------------------------------------------------cccCCCC-cCccChhhhccccc
Confidence 0114467 889999999987
Q ss_pred ---------CCCccccchhhhHHHHHHcCCCCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001366 508 ---------VCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1092)
Q Consensus 508 ---------~~t~~sDIwSLGvll~ell~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~e 578 (1092)
.++.++|||||||+||||+++..+....... .....+ .+.....++.+.+|+.+||.+||.+|||+.+
T Consensus 280 ~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~--~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e 356 (377)
T 3byv_A 280 ISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAAL--GGSEWI-FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQ 356 (377)
T ss_dssp THHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC--------CCSGGG-GSSCCCCCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred ccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccc--cchhhh-hhhccCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence 8999999999999999999863332211110 011111 1122455788999999999999999999999
Q ss_pred Hhhhhhhhhhhc
Q 001366 579 ILQSEVTNEFQE 590 (1092)
Q Consensus 579 iL~~~~~~~~~~ 590 (1092)
+|+||||.+...
T Consensus 357 ~l~hp~f~~~~~ 368 (377)
T 3byv_A 357 AMETPEYEQLRT 368 (377)
T ss_dssp HHTSHHHHHHHH
T ss_pred HhhChHHHHHHH
Confidence 999999987644
No 224
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.97 E-value=3.2e-31 Score=312.53 Aligned_cols=254 Identities=15% Similarity=0.160 Sum_probs=178.2
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ ++.|+||++...+ .++.++.|+.... .....++..++...+||||+.++..........
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~----~~~~vaiK~~~~~-----~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~--- 123 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCD----SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK--- 123 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETT----TCCEEEEEEEECC-----TTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTT---
T ss_pred EEeeeEEeeCCCEEEEEEEECC----CCcEEEEEEeccc-----chhHHHHHHHHHHcCCCCccceeeEEeccCCCC---
Confidence 4444444 4789999998732 3455666554221 122335677788889999998755533211100
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHh---hcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC-Cc
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLN---ARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-NQ 367 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~---~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~-~~ 367 (1092)
... + ...+|||++| +|.+++. .....++...++.|+.||+.||.|||++||+||||||+||||+.+ +.
T Consensus 124 -~~~-~-----~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~ 195 (420)
T 1j1b_A 124 -DEV-Y-----LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 195 (420)
T ss_dssp -TEE-E-----EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTE
T ss_pred -cce-e-----EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCe
Confidence 000 0 1137899987 6666664 344568888999999999999999999999999999999999965 67
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+||+|||+++.+....
T Consensus 196 ~kl~DFG~a~~~~~~~---------------------------------------------------------------- 211 (420)
T 1j1b_A 196 LKLCDFGSAKQLVRGE---------------------------------------------------------------- 211 (420)
T ss_dssp EEECCCTTCEECCTTC----------------------------------------------------------------
T ss_pred EEeccchhhhhcccCC----------------------------------------------------------------
Confidence 8999999997643100
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHc
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell 526 (1092)
.....+||++|+|||++.+. .++.++|||||||+||||+
T Consensus 212 ----------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell 251 (420)
T 1j1b_A 212 ----------------------------------------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251 (420)
T ss_dssp ----------------------------------------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHH
Confidence 00145789999999999874 7999999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccc------------------cCCCCC---------CCCCChhHHHHHHhccccCCCCCCCH
Q 001366 527 GR---FDSERALAAAMSDLRD------------------RILPPS---------FLSENPKEAGFCLWQLHPEPLSRPTT 576 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~------------------~~~p~~---------~~~~~~~~~~li~~lL~~dP~~Rpsa 576 (1092)
++ |.+.....+....+.. ..+|.. ....++.+.+||.+||++||.+|||+
T Consensus 252 ~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~ 331 (420)
T 1j1b_A 252 LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 331 (420)
T ss_dssp HSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCH
Confidence 86 6554433333222211 011110 12346788999999999999999999
Q ss_pred HHHhhhhhhhhhhcc
Q 001366 577 REILQSEVTNEFQEV 591 (1092)
Q Consensus 577 ~eiL~~~~~~~~~~~ 591 (1092)
.|+|+||||.+.+..
T Consensus 332 ~e~l~hp~f~~~~~~ 346 (420)
T 1j1b_A 332 LEACAHSFFDELRDP 346 (420)
T ss_dssp HHHHTSGGGGGGGCT
T ss_pred HHHhCCHhhcccccc
Confidence 999999999876543
No 225
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.97 E-value=2.4e-31 Score=302.46 Aligned_cols=240 Identities=14% Similarity=0.002 Sum_probs=169.6
Q ss_pred ccccceeeeCCCCCcccccccc----ccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCC
Q 001366 220 LKGKGIVCRGPPLNAFKERRGM----IDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
.+|.|.||+|.... .+.. ++.|+..............++...+...+||||+.++.....+. .
T Consensus 23 ~G~~g~Vy~~~~~~----~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~-------- 89 (325)
T 3kex_A 23 SGVFGTVHKGVWIP----EGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS-L-------- 89 (325)
T ss_dssp CCSSCEEEEEEECC----TTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSS-E--------
T ss_pred ecCCceEEEEEEcC----CCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCc-c--------
Confidence 34789999997522 1222 33333322222222223344555677789999998876532111 1
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPII 375 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~ 375 (1092)
..+|+|+.|++|.+++......++..+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus 90 --------~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 161 (325)
T 3kex_A 90 --------QLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGV 161 (325)
T ss_dssp --------EEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSG
T ss_pred --------EEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCc
Confidence 138999999999999987655678889999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++.......
T Consensus 162 a~~~~~~~~----------------------------------------------------------------------- 170 (325)
T 3kex_A 162 ADLLPPDDK----------------------------------------------------------------------- 170 (325)
T ss_dssp GGGSCCCTT-----------------------------------------------------------------------
T ss_pred ccccCcccc-----------------------------------------------------------------------
Confidence 987541100
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCc
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDS 531 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~ 531 (1092)
....+...||..|+|||++.+..++.++|||||||+||||++ + |..
T Consensus 171 ------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 220 (325)
T 3kex_A 171 ------------------------------QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG 220 (325)
T ss_dssp ------------------------------CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ------------------------------cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccc
Confidence 000114467888999999999999999999999999999998 5 332
Q ss_pred HHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 532 ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 532 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
.... .....+.....++.....++.+.+|+.+||++||.+||++.+++++
T Consensus 221 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 221 LRLA-EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp SCTT-HHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred cCHH-HHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 2111 1111222222222233356788899999999999999999999986
No 226
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.97 E-value=7.8e-31 Score=294.93 Aligned_cols=249 Identities=15% Similarity=0.126 Sum_probs=181.9
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+.+.++ +.|.||++... ..+..++.|++..... .......++...+...+|||++.++.........+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~-- 82 (304)
T 2jam_A 10 TFIFMEVLGSGAFSEVFLVKQR----LTGKLFALKCIKKSPA-FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYY-- 82 (304)
T ss_dssp HEEEEEEEEECSSEEEEEEEET----TTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEE--
T ss_pred cceeeeeccCCCCceEEEEEEC----CCCCEEEEEEEecccc-cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEE--
Confidence 344444443 67999998752 1245566666533221 12233445666778889999998766544322222
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE---ccCCc
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL---LQSNQ 367 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill---~~~~~ 367 (1092)
.+|||++|++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+||++ +..+.
T Consensus 83 --------------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~ 147 (304)
T 2jam_A 83 --------------LVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSK 147 (304)
T ss_dssp --------------EEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCC
T ss_pred --------------EEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCC
Confidence 3899999999999997664 47777999999999999999999999999999999999 67889
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+|++|||+++....
T Consensus 148 ~kl~Dfg~~~~~~~------------------------------------------------------------------ 161 (304)
T 2jam_A 148 IMITDFGLSKMEQN------------------------------------------------------------------ 161 (304)
T ss_dssp EEBCSCSTTCCCCC------------------------------------------------------------------
T ss_pred EEEccCCcceecCC------------------------------------------------------------------
Confidence 99999998754220
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~ 527 (1092)
.......||+.|+|||.+.+..++.++|||||||++|||++
T Consensus 162 ---------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~ 202 (304)
T 2jam_A 162 ---------------------------------------GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLC 202 (304)
T ss_dssp ---------------------------------------BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHH
Confidence 00113468999999999999999999999999999999998
Q ss_pred C---CCcHHHHHHHHHhccc--cCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 528 R---FDSERALAAAMSDLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 528 ~---f~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
+ |............... ...++.....++.+.+|+.+||++||.+|||+.++|+||||...
T Consensus 203 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 268 (304)
T 2jam_A 203 GYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN 268 (304)
T ss_dssp SSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence 6 4333222222111111 12223345567889999999999999999999999999999864
No 227
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.97 E-value=3.5e-31 Score=302.76 Aligned_cols=244 Identities=17% Similarity=0.177 Sum_probs=159.4
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..+|.|.||++... ..++.++.|+.... .........++....|||++.+++........ ...
T Consensus 38 G~G~~g~V~~~~~~----~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~-----~~~--- 100 (336)
T 3fhr_A 38 GLGVNGKVLECFHR----RTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHG-----KRC--- 100 (336)
T ss_dssp EEETTEEEEEEEET----TTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT-----EEE---
T ss_pred eeCCCeEEEEEEEC----CCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCC-----Cce---
Confidence 44688999999763 22556666665321 12222333445677899999876654321100 000
Q ss_pred cccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC---CcEEEeccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS---NQVKYIGPI 374 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~---~~vkl~Dfg 374 (1092)
..++||||+|++|.+++...+ ..++..+++.|+.||+.||+|||++||+||||||+|||++.+ +.+||+|||
T Consensus 101 ----~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 101 ----LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp ----EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred ----EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 113899999999999997654 468888999999999999999999999999999999999864 459999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++.....
T Consensus 177 ~~~~~~~~------------------------------------------------------------------------ 184 (336)
T 3fhr_A 177 FAKETTQN------------------------------------------------------------------------ 184 (336)
T ss_dssp TCEEC---------------------------------------------------------------------------
T ss_pred cceecccc------------------------------------------------------------------------
Confidence 88753310
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCc
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDS 531 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~ 531 (1092)
......||+.|+|||++.+..++.++|||||||+||||+++ |..
T Consensus 185 ---------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (336)
T 3fhr_A 185 ---------------------------------ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYS 231 (336)
T ss_dssp ----------------------------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred ---------------------------------ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 01144679999999999888999999999999999999986 322
Q ss_pred HHHHHHH---HHhc---cccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 532 ERALAAA---MSDL---RDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 532 ~~~~~~~---~~~~---~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
....... ...+ .....++.+...++.+.+|+.+||++||.+|||+.|+|+||||+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 232 NTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp -------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred ccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 2211110 1111 1112233445678899999999999999999999999999999875
No 228
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.97 E-value=2.5e-31 Score=305.17 Aligned_cols=268 Identities=18% Similarity=0.196 Sum_probs=185.4
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||++... ..+..++.|+..............++..++...+|||++.++.....+....
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--- 85 (353)
T 2b9h_A 13 FQLKSLLGEGAYGVVCSATHK----PTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFEN--- 85 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEET----TTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTT---
T ss_pred eEEeeEEcCCCCeEEEEEEEC----CCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCc---
Confidence 4444444 478999999763 2245566666543333333444557777888889999998766533221111
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
.. ...++|||+. ++|.+++... .++..+++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus 86 -~~-------~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~ 154 (353)
T 2b9h_A 86 -FN-------EVYIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVC 154 (353)
T ss_dssp -CC-------CEEEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEEC
T ss_pred -cc-------eEEEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEE
Confidence 01 1124788987 5999999764 57888999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++...........
T Consensus 155 Dfg~a~~~~~~~~~~~~--------------------------------------------------------------- 171 (353)
T 2b9h_A 155 DFGLARIIDESAADNSE--------------------------------------------------------------- 171 (353)
T ss_dssp CCTTCEECC-----------------------------------------------------------------------
T ss_pred ecccccccccccccccC---------------------------------------------------------------
Confidence 99999875521100000
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC--
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR-- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~-- 528 (1092)
...........+||++|+|||++.+ ..++.++|||||||+||||+++
T Consensus 172 ------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~ 221 (353)
T 2b9h_A 172 ------------------------------PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRP 221 (353)
T ss_dssp --------------------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred ------------------------------ccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCC
Confidence 0000011225689999999998865 6789999999999999999985
Q ss_pred -CCcHHHHHHHHHhc--cccC-----------------------CC-----CCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001366 529 -FDSERALAAAMSDL--RDRI-----------------------LP-----PSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1092)
Q Consensus 529 -f~~~~~~~~~~~~~--~~~~-----------------------~p-----~~~~~~~~~~~~li~~lL~~dP~~Rpsa~ 577 (1092)
|.+........... ...+ .+ ..+...++.+.+|+.+||++||.+|||+.
T Consensus 222 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 301 (353)
T 2b9h_A 222 IFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAK 301 (353)
T ss_dssp SCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred CCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHH
Confidence 54433222221111 0000 00 01235678899999999999999999999
Q ss_pred HHhhhhhhhhhhccc
Q 001366 578 EILQSEVTNEFQEVC 592 (1092)
Q Consensus 578 eiL~~~~~~~~~~~~ 592 (1092)
|+|+||||.......
T Consensus 302 ell~hp~~~~~~~~~ 316 (353)
T 2b9h_A 302 EALEHPYLQTYHDPN 316 (353)
T ss_dssp HHHTSGGGTTTCCTT
T ss_pred HHhcCccccccCCcc
Confidence 999999998765543
No 229
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.97 E-value=6.6e-31 Score=304.05 Aligned_cols=241 Identities=15% Similarity=0.143 Sum_probs=177.1
Q ss_pred cccceeeeCCCCCccccccccccccccccccCc--hh-----hHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SD-----AALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGAR 292 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 292 (1092)
++.|.||++... ..+..++.|++...... .. .....++..++... .|||++.++.........+
T Consensus 105 G~~g~Vy~a~~~----~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~---- 176 (365)
T 2y7j_A 105 GVSSVVRRCVHR----ATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMF---- 176 (365)
T ss_dssp CSSEEEEEEEET----TTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEE----
T ss_pred CCCEEEEEEEEC----CCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEE----
Confidence 468999999763 12556677665332211 01 12233445555555 7999998776654333333
Q ss_pred CCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEec
Q 001366 293 TGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIG 372 (1092)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~D 372 (1092)
.+|||++|++|.+++.... .++...++.|+.||+.||+|||++||+||||||+||+++.++.+|++|
T Consensus 177 ------------lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~D 243 (365)
T 2y7j_A 177 ------------LVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSD 243 (365)
T ss_dssp ------------EEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECC
T ss_pred ------------EEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEe
Confidence 3899999999999997654 577889999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCC
Q 001366 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1092)
Q Consensus 373 fg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 452 (1092)
||++..+...
T Consensus 244 fG~~~~~~~~---------------------------------------------------------------------- 253 (365)
T 2y7j_A 244 FGFSCHLEPG---------------------------------------------------------------------- 253 (365)
T ss_dssp CTTCEECCTT----------------------------------------------------------------------
T ss_pred cCcccccCCC----------------------------------------------------------------------
Confidence 9988664310
Q ss_pred CCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC------CCCCccccchhhhHHHHHHc
Q 001366 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG------GVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~------~~~t~~sDIwSLGvll~ell 526 (1092)
......+||+.|+|||++.+ ..++.++|||||||+||||+
T Consensus 254 ----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell 299 (365)
T 2y7j_A 254 ----------------------------------EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL 299 (365)
T ss_dssp ----------------------------------CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHH
T ss_pred ----------------------------------cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHH
Confidence 00114578999999999864 35889999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccc--cCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~ 586 (1092)
++ |............... ....+.+...++.+.+||.+||++||.+|||+.++|+||||.
T Consensus 300 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 300 AGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364 (365)
T ss_dssp HSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred HCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence 86 4333322222222221 112233456678899999999999999999999999999996
No 230
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=6.6e-31 Score=305.93 Aligned_cols=263 Identities=17% Similarity=0.170 Sum_probs=179.1
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCC---
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD--- 288 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 288 (1092)
|.+.+.+ ++.|+||++... ..++.++.|+.... .....++..++...+||||+.+++.........
T Consensus 9 y~~~~~lG~G~fg~V~~a~~~----~~~~~vAiK~~~~~-----~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 9 YSLGKTLGTGSFGIVCEVFDI----ESGKRFALKKVLQD-----PRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp EEEEEEEECC-CEEEEEEEET----TTCCEEEEEEEECC-----TTSCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred EEEEEEEEeccCEEEEEEEEC----CCCCEEEEEEEecC-----cchHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 4444444 478999999752 23566666655322 122235667788889999998876653322100
Q ss_pred ----------CCccCCCCC----ccc---cC--CCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhh
Q 001366 289 ----------LGARTGVPA----SCW---IG--GLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHH 346 (1092)
Q Consensus 289 ----------~~~~~~~~~----~~~---~~--~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lH 346 (1092)
.....++.. ..+ .+ ..++|||++| +|.++|.. .+..++...++.|+.||+.||.|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 000000000 000 00 2258999995 88887753 4456888899999999999999999
Q ss_pred hcCccccCCCCCCeEEc-cCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCccccc
Q 001366 347 TQGVTFLDLKPSSFKLL-QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSR 425 (1092)
Q Consensus 347 s~gIvHrDLKP~Nill~-~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (1092)
++||+||||||+|||++ .++.+||+|||+++.+....
T Consensus 159 ~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------ 196 (383)
T 3eb0_A 159 SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE------------------------------------------ 196 (383)
T ss_dssp TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS------------------------------------------
T ss_pred HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC------------------------------------------
Confidence 99999999999999998 68899999999987643100
Q ss_pred ccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc
Q 001366 426 WWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS 505 (1092)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~ 505 (1092)
......||++|+|||++.
T Consensus 197 --------------------------------------------------------------~~~~~~~t~~y~aPE~~~ 214 (383)
T 3eb0_A 197 --------------------------------------------------------------PSVAYICSRFYRAPELML 214 (383)
T ss_dssp --------------------------------------------------------------CCCCCCCCSSCCCHHHHT
T ss_pred --------------------------------------------------------------CCcCcccCCCccCHHHhc
Confidence 011456899999999998
Q ss_pred CC-CCCccccchhhhHHHHHHcCC---CCcHHHHHHHHHhcccc------------------CCCC---------CCCCC
Q 001366 506 GG-VCTTSSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDR------------------ILPP---------SFLSE 554 (1092)
Q Consensus 506 ~~-~~t~~sDIwSLGvll~ell~~---f~~~~~~~~~~~~~~~~------------------~~p~---------~~~~~ 554 (1092)
+. .++.++|||||||++|||+++ |.+..........+... .+|. .....
T Consensus 215 ~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (383)
T 3eb0_A 215 GATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGT 294 (383)
T ss_dssp TCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTC
T ss_pred CCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCC
Confidence 74 489999999999999999985 55544433333222110 0110 01234
Q ss_pred ChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 555 NPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 555 ~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
++.+.+|+.+||++||.+|||+.|+|+||||.+.+.
T Consensus 295 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 295 PSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp CHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHHh
Confidence 677899999999999999999999999999987644
No 231
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.97 E-value=8.1e-31 Score=302.35 Aligned_cols=251 Identities=16% Similarity=0.185 Sum_probs=176.5
Q ss_pred cccceeeeCCCCCccccccccccccccccccCch----------hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS----------DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
+|.|.||++...+ +..++.|++....... ......++..++...+|||++.+++.........
T Consensus 33 G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-- 105 (362)
T 3pg1_A 33 GSYGAVCAGVDSE-----GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPA-- 105 (362)
T ss_dssp ETTEEEEEEECTT-----SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTT--
T ss_pred CCCEEEEEEECCC-----CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCC--
Confidence 4789999997644 4555665543222111 1134556777788889999998877654322111
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
... ..++|||+. ++|.+++......++..+++.++.||+.||.|||++||+||||||+||+++.++.+||
T Consensus 106 --~~~-------~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl 175 (362)
T 3pg1_A 106 --MHK-------LYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI 175 (362)
T ss_dssp --CCE-------EEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred --cce-------EEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEE
Confidence 000 114799998 5899999877667889899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++.....
T Consensus 176 ~Dfg~~~~~~~~-------------------------------------------------------------------- 187 (362)
T 3pg1_A 176 CDFNLAREDTAD-------------------------------------------------------------------- 187 (362)
T ss_dssp CCTTC---------------------------------------------------------------------------
T ss_pred EecCcccccccc--------------------------------------------------------------------
Confidence 999998653310
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~- 528 (1092)
.......||++|+|||++.+ ..++.++|||||||++|||+++
T Consensus 188 ------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~ 231 (362)
T 3pg1_A 188 ------------------------------------ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231 (362)
T ss_dssp --------------------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSS
T ss_pred ------------------------------------cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCC
Confidence 00114578999999999987 6789999999999999999985
Q ss_pred --CCcHHHHHHHHHhcc-----------------------c--cCCC-----CCCCCCChhHHHHHHhccccCCCCCCCH
Q 001366 529 --FDSERALAAAMSDLR-----------------------D--RILP-----PSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~-----------------------~--~~~p-----~~~~~~~~~~~~li~~lL~~dP~~Rpsa 576 (1092)
|.+............ . ...+ ......++.+.+|+.+||++||.+|||+
T Consensus 232 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 311 (362)
T 3pg1_A 232 ALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRIST 311 (362)
T ss_dssp CSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCH
Confidence 544322222111110 0 0001 1123457889999999999999999999
Q ss_pred HHHhhhhhhhhhhccc
Q 001366 577 REILQSEVTNEFQEVC 592 (1092)
Q Consensus 577 ~eiL~~~~~~~~~~~~ 592 (1092)
.|+|+||||.......
T Consensus 312 ~ell~hp~f~~~~~~~ 327 (362)
T 3pg1_A 312 EQALRHPYFESLFDPL 327 (362)
T ss_dssp HHHHTSGGGTTTCCGG
T ss_pred HHHHcCchhhhccCcc
Confidence 9999999999865443
No 232
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.97 E-value=6e-31 Score=299.65 Aligned_cols=246 Identities=16% Similarity=0.069 Sum_probs=175.0
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccc----cccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMI----DTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
|.+.+.+ +|.|.||++.... .+..+ +.|...............++..++...+|||++.+++....+...
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~----~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 92 (327)
T 3lzb_A 17 FKKIKVLGSGAFGTVYKGLWIP----EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 92 (327)
T ss_dssp EEEEEEEEECSSEEEEEEEECC----TTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEE
T ss_pred ceEEEEeeeCCCeEEEEEEEcC----CCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCce
Confidence 4444444 4789999997522 12222 223322222233344555677788888999999887765432211
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~ 367 (1092)
.+++|+.+++|.+++......++..+++.|+.||+.||.|||++||+||||||+|||++.++.
T Consensus 93 -----------------~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~ 155 (327)
T 3lzb_A 93 -----------------LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH 155 (327)
T ss_dssp -----------------EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTE
T ss_pred -----------------EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCC
Confidence 279999999999999887777889899999999999999999999999999999999999999
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+||+|||+++.......
T Consensus 156 ~kL~DfG~a~~~~~~~~--------------------------------------------------------------- 172 (327)
T 3lzb_A 156 VKITDFGLAKLLGAEEK--------------------------------------------------------------- 172 (327)
T ss_dssp EEECCTTC------------------------------------------------------------------------
T ss_pred EEEccCcceeEccCccc---------------------------------------------------------------
Confidence 99999999977541100
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~ 527 (1092)
........||+.|+|||++.+..++.++|||||||+||||++
T Consensus 173 --------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~ 214 (327)
T 3lzb_A 173 --------------------------------------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214 (327)
T ss_dssp ---------------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------------cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHH
Confidence 000113456788999999999999999999999999999998
Q ss_pred -C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 528 -R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 528 -~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
+ |..... ......+.....++.....++.+.+|+.+||++||.+||++.|+++.
T Consensus 215 ~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 272 (327)
T 3lzb_A 215 FGSKPYDGIPA-SEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp TSCCTTTTCCG-GGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCCCCH-HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 5 332211 11222222233334444567889999999999999999999999973
No 233
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.97 E-value=5.9e-31 Score=294.33 Aligned_cols=256 Identities=18% Similarity=0.135 Sum_probs=188.7
Q ss_pred CCchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecC
Q 001366 209 SGFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSN 284 (1092)
Q Consensus 209 ~~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (1092)
.....|.+.+.++ |.|.||++...+ .+..++.|+...... ........++..++....|||++.++.....+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 87 (294)
T 2rku_A 12 RSRRRYVRGRFLGKGGFAKCFEISDAD----TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN 87 (294)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETT----TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred CcccceEEEEEEeecCCEEEEEEEECC----CCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccC
Confidence 3344555555554 789999998633 244556655432221 12233445566778888999999877665433
Q ss_pred CCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc
Q 001366 285 GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~ 364 (1092)
...+ .+|||++|++|.++++..+ .++..+++.++.||+.||+|||++||+||||||+||+++.
T Consensus 88 ~~~~----------------lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~ 150 (294)
T 2rku_A 88 DFVF----------------VVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 150 (294)
T ss_dssp SEEE----------------EEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred CEEE----------------EEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcC
Confidence 3222 3899999999999997754 5777799999999999999999999999999999999999
Q ss_pred CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 365 ~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
++.+||+|||+++......
T Consensus 151 ~~~~kl~dfg~~~~~~~~~------------------------------------------------------------- 169 (294)
T 2rku_A 151 DLEVKIGDFGLATKVEYDG------------------------------------------------------------- 169 (294)
T ss_dssp TCCEEECCCTTCEECCSTT-------------------------------------------------------------
T ss_pred CCCEEEEeccCceecccCc-------------------------------------------------------------
Confidence 9999999999887643100
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~e 524 (1092)
.......||+.|+|||.+.+..++.++|||||||++||
T Consensus 170 ------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ 207 (294)
T 2rku_A 170 ------------------------------------------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 207 (294)
T ss_dssp ------------------------------------------CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHH
Confidence 00113568999999999999889999999999999999
Q ss_pred HcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 525 LFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 525 ll~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
|+++ |................. +.....++.+.+|+.+||++||.+|||+.++|+||||.....
T Consensus 208 l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 274 (294)
T 2rku_A 208 LLVGKPPFETSCLKETYLRIKKNEY--SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI 274 (294)
T ss_dssp HHHSSCTTCCSSHHHHHHHHHTTCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred HHhCCCCCCCCCHHHHHHHHhhccC--CCccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCc
Confidence 9986 444333222222222211 112245788999999999999999999999999999987543
No 234
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.1e-31 Score=300.43 Aligned_cols=249 Identities=12% Similarity=0.077 Sum_probs=178.0
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||++.... .+..++.|++.............++..++...+|||++.+++........
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~---- 82 (319)
T 4euu_A 11 WLLSDILGQGATANVFRGRHKK----TGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTR---- 82 (319)
T ss_dssp EEEEEEEEECSSEEEEEEEETT----TCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTC----
T ss_pred EEEEEEecCCCCeEEEEEEECC----CCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCc----
Confidence 4444444 4789999998632 35566777664433333344455777788888999999877654322211
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE----ccC
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGH--KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL----LQS 365 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~--~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill----~~~ 365 (1092)
.. .++|||++|++|.++++.... .++..+++.|+.||+.||+|||++||+||||||+|||+ +..
T Consensus 83 ---~~-------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~ 152 (319)
T 4euu_A 83 ---HK-------VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQ 152 (319)
T ss_dssp ---CE-------EEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSC
T ss_pred ---eE-------EEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCC
Confidence 00 138999999999999976433 37888999999999999999999999999999999999 777
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+.+||+|||+++.....
T Consensus 153 ~~~kL~Dfg~a~~~~~~--------------------------------------------------------------- 169 (319)
T 4euu_A 153 SVYKLTDFGAARELEDD--------------------------------------------------------------- 169 (319)
T ss_dssp EEEEECCCTTCEECCTT---------------------------------------------------------------
T ss_pred ceEEEccCCCceecCCC---------------------------------------------------------------
Confidence 88999999998764410
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc--------CCCCCccccchh
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS--------GGVCTTSSNIYS 517 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~--------~~~~t~~sDIwS 517 (1092)
.......||+.|+|||++. +..++.++||||
T Consensus 170 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Diws 208 (319)
T 4euu_A 170 -----------------------------------------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWS 208 (319)
T ss_dssp -----------------------------------------CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHH
T ss_pred -----------------------------------------CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHH
Confidence 0011456899999999986 577899999999
Q ss_pred hhHHHHHHcCC---CC---cHHHHHHHHHhccccCC---------------------CCC--C-CCCChhHHHHHHhccc
Q 001366 518 LGVLFFELFGR---FD---SERALAAAMSDLRDRIL---------------------PPS--F-LSENPKEAGFCLWQLH 567 (1092)
Q Consensus 518 LGvll~ell~~---f~---~~~~~~~~~~~~~~~~~---------------------p~~--~-~~~~~~~~~li~~lL~ 567 (1092)
|||+||||+++ |. ........+..+..... |.. + ...++.+.+|+.+||+
T Consensus 209 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~ 288 (319)
T 4euu_A 209 IGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILE 288 (319)
T ss_dssp HHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhcc
Confidence 99999999986 32 11222222222221111 110 0 0112457799999999
Q ss_pred cCCCCCCCHHHHhhhhh
Q 001366 568 PEPLSRPTTREILQSEV 584 (1092)
Q Consensus 568 ~dP~~Rpsa~eiL~~~~ 584 (1092)
+||.+|||++|+|+||-
T Consensus 289 ~dP~~R~s~~ell~h~~ 305 (319)
T 4euu_A 289 ADQEKCWGFDQFFAETS 305 (319)
T ss_dssp CCTTTSCCHHHHHHHHH
T ss_pred CChhhhccHHHhhhccH
Confidence 99999999999999984
No 235
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.97 E-value=8.5e-31 Score=293.85 Aligned_cols=249 Identities=15% Similarity=0.049 Sum_probs=182.2
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|.||++.....-...+..++.|++.............++..++...+|||++.+++.........
T Consensus 31 ~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~----------- 99 (302)
T 4e5w_A 31 EGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG----------- 99 (302)
T ss_dssp ECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC-----------
T ss_pred CCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce-----------
Confidence 347899999873211122356677776644433333445566777888889999998776654321111
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
...+|||++|++|.+++......++..+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+++..
T Consensus 100 ---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 100 ---IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp ---EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred ---EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccc
Confidence 01389999999999999777667888899999999999999999999999999999999999999999999998765
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
.....
T Consensus 177 ~~~~~--------------------------------------------------------------------------- 181 (302)
T 4e5w_A 177 ETDKE--------------------------------------------------------------------------- 181 (302)
T ss_dssp CTTCC---------------------------------------------------------------------------
T ss_pred cCCCc---------------------------------------------------------------------------
Confidence 41100
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCc--------
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS-------- 531 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~-------- 531 (1092)
.........||..|+|||.+.+..++.++|||||||++|||+++..+
T Consensus 182 -------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~ 236 (302)
T 4e5w_A 182 -------------------------YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALF 236 (302)
T ss_dssp -------------------------EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH
T ss_pred -------------------------ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHH
Confidence 00001144678889999999999999999999999999999996332
Q ss_pred ---------HHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 532 ---------ERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 532 ---------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
..........+.....++.....++.+.+|+.+||+.||.+|||+.++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 296 (302)
T 4e5w_A 237 LKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEG 296 (302)
T ss_dssp HHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred hhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 222233333333333444445668899999999999999999999999873
No 236
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.97 E-value=4.2e-31 Score=308.89 Aligned_cols=255 Identities=18% Similarity=0.189 Sum_probs=178.9
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+.+.++ |.|+||++...+ ...++.|.... +.....++..++...+||||+.++..........
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~-----~~~~aikk~~~-----~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~-- 108 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVE-----SDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKK-- 108 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETT-----TEEEEEEEEEC-----CTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSS--
T ss_pred eEEEeEEEeeCCCeEEEEEEECC-----CCeEEEEEEec-----CcchHHHHHHHHHhCCCCCcceEEEEEEecCCCC--
Confidence 355555554 789999998633 22234433221 1122335677788889999998766654322111
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc-cCCc
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLN--ARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL-QSNQ 367 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~--~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~-~~~~ 367 (1092)
.... ...+|||+.|+.+..+.. .....++...++.|+.||+.||+|||++||+||||||+||||+ .++.
T Consensus 109 -~~~~-------~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~ 180 (394)
T 4e7w_A 109 -DEVF-------LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGV 180 (394)
T ss_dssp -SCEE-------EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTE
T ss_pred -CceE-------EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCc
Confidence 0000 113799999865554432 2345688889999999999999999999999999999999999 7899
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+||+|||+++......
T Consensus 181 ~kL~DFG~a~~~~~~~---------------------------------------------------------------- 196 (394)
T 4e7w_A 181 LKLIDFGSAKILIAGE---------------------------------------------------------------- 196 (394)
T ss_dssp EEECCCTTCEECCTTC----------------------------------------------------------------
T ss_pred EEEeeCCCcccccCCC----------------------------------------------------------------
Confidence 9999999987643100
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHHHHc
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ell 526 (1092)
.....+||++|+|||++.+. .++.++|||||||+||||+
T Consensus 197 ----------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell 236 (394)
T 4e7w_A 197 ----------------------------------------PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELM 236 (394)
T ss_dssp ----------------------------------------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence 01145789999999999874 5899999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccc------------------cCCCC--------CC-CCCChhHHHHHHhccccCCCCCCCH
Q 001366 527 GR---FDSERALAAAMSDLRD------------------RILPP--------SF-LSENPKEAGFCLWQLHPEPLSRPTT 576 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~------------------~~~p~--------~~-~~~~~~~~~li~~lL~~dP~~Rpsa 576 (1092)
++ |.+..........++. ..+|. .+ ...++.+.+|+.+||++||.+|||+
T Consensus 237 ~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 316 (394)
T 4e7w_A 237 QGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTA 316 (394)
T ss_dssp HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCH
Confidence 85 6554433333222211 01111 01 2357889999999999999999999
Q ss_pred HHHhhhhhhhhhhcc
Q 001366 577 REILQSEVTNEFQEV 591 (1092)
Q Consensus 577 ~eiL~~~~~~~~~~~ 591 (1092)
.|+|+||||.+.+..
T Consensus 317 ~e~l~hp~f~~~~~~ 331 (394)
T 4e7w_A 317 IEALCHPFFDELRTG 331 (394)
T ss_dssp HHHHTSGGGSTTTSS
T ss_pred HHHhcChhhhhhccc
Confidence 999999999876543
No 237
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=8.2e-31 Score=289.25 Aligned_cols=244 Identities=16% Similarity=0.131 Sum_probs=181.9
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
+|.+.+.+ +|.|.||++...+ +..++.|+...... ......++..++...+|||++.++.....+...+
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~-- 81 (269)
T 4hcu_A 11 ELTFVQEIGSGQFGLVHLGYWLN-----KDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPIC-- 81 (269)
T ss_dssp GEEEEEEEEECSSCEEEEEEETT-----TEEEEEEEECTTSB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE--
T ss_pred hceeeheecCCCccEEEEEEecC-----CCeEEEEEeccccc--CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceE--
Confidence 34444444 4789999998643 34455555532221 2233456677788889999998776654333222
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
.+|||++|++|.+++......++..+++.++.||+.||+|||++||+||||||+||+++.++.+|+
T Consensus 82 --------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl 147 (269)
T 4hcu_A 82 --------------LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV 147 (269)
T ss_dssp --------------EEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEE
T ss_pred --------------EEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEe
Confidence 389999999999999877777889899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++.......
T Consensus 148 ~Dfg~~~~~~~~~~------------------------------------------------------------------ 161 (269)
T 4hcu_A 148 SDFGMTRFVLDDQY------------------------------------------------------------------ 161 (269)
T ss_dssp CCTTGGGGBCCHHH------------------------------------------------------------------
T ss_pred cccccccccccccc------------------------------------------------------------------
Confidence 99999876441000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~- 528 (1092)
.......+|+.|+|||.+.+..++.++|||||||++|||++ +
T Consensus 162 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~ 205 (269)
T 4hcu_A 162 ------------------------------------TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 205 (269)
T ss_dssp ------------------------------------HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred ------------------------------------ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCC
Confidence 00113456788999999998999999999999999999998 4
Q ss_pred --CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|...... .....+.....+......++.+.+|+.+||++||.+||++.+++++
T Consensus 206 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 206 IPYENRSNS-EVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp CTTTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCHH-HHHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 4333222 2233333333333334457889999999999999999999999986
No 238
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.97 E-value=5.1e-31 Score=293.32 Aligned_cols=249 Identities=12% Similarity=0.081 Sum_probs=183.2
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
.|.+.+.+ ++.|.||++.... .+..++.|+...... ........++..++...+|||++.++.....+...+
T Consensus 15 ~y~~~~~lg~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 90 (284)
T 2vgo_A 15 DFDIGRPLGKGKFGNVYLAREKQ----NKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIY 90 (284)
T ss_dssp GEEEEEEEEECSSEEEEEEEETT----TTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred hceeeheecCCCCeEEEEEEEcC----CCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEE
Confidence 45555444 3689999997632 234455555422111 111233445566777889999998777654333222
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
++|||++|++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+||+++.++.+
T Consensus 91 ----------------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~ 153 (284)
T 2vgo_A 91 ----------------LMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGEL 153 (284)
T ss_dssp ----------------EEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCE
T ss_pred ----------------EEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCE
Confidence 3899999999999997765 47787999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
|++|||++......
T Consensus 154 kl~Dfg~~~~~~~~------------------------------------------------------------------ 167 (284)
T 2vgo_A 154 KIADFGWSVHAPSL------------------------------------------------------------------ 167 (284)
T ss_dssp EECCCTTCEECSSS------------------------------------------------------------------
T ss_pred EEecccccccCccc------------------------------------------------------------------
Confidence 99999987553200
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~ 528 (1092)
......||+.|+|||.+.+..++.++|||||||++|||+++
T Consensus 168 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g 208 (284)
T 2vgo_A 168 ---------------------------------------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208 (284)
T ss_dssp ---------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHS
T ss_pred ---------------------------------------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHC
Confidence 00134688999999999999999999999999999999985
Q ss_pred ---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
|................. +.....++.+.+|+.+||++||.+||++.++++||||....
T Consensus 209 ~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~ 270 (284)
T 2vgo_A 209 MPPFDSPSHTETHRRIVNVDL--KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 270 (284)
T ss_dssp SCTTCCSSHHHHHHHHHTTCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHC
T ss_pred CCCCCCCCHhHHHHHHhcccc--CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhc
Confidence 444333222222222211 11123478899999999999999999999999999998754
No 239
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=303.47 Aligned_cols=252 Identities=16% Similarity=0.152 Sum_probs=183.1
Q ss_pred HHHhhhc--cccceeeeCCCCC---ccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLN---AFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 287 (1092)
|.+.+.+ +|.|.||++.... .....+..++.|+..............++..++... +||||+.++.....+...
T Consensus 71 y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~ 150 (382)
T 3tt0_A 71 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL 150 (382)
T ss_dssp EEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred eEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCce
Confidence 4444444 4789999987411 001113345666554333333334455666667666 899999987765543333
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCccc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRIECLYIFRQIVALVDYHHTQGVTF 352 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~~~~~~~i~~qil~~l~~lHs~gIvH 352 (1092)
+ ++|||++|++|.++|.... ..++..+++.|+.||+.||+|||++||+|
T Consensus 151 ~----------------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH 214 (382)
T 3tt0_A 151 Y----------------VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIH 214 (382)
T ss_dssp E----------------EEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred E----------------EEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 3 3899999999999997654 34888899999999999999999999999
Q ss_pred cCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccC
Q 001366 353 LDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPS 432 (1092)
Q Consensus 353 rDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (1092)
|||||+||||+.++.+||+|||+++.......
T Consensus 215 ~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~------------------------------------------------ 246 (382)
T 3tt0_A 215 RDLAARNVLVTEDNVMKIADFGLARDIHHIDY------------------------------------------------ 246 (382)
T ss_dssp SCCCGGGEEECTTCCEEECSCSCCCCSSCCCT------------------------------------------------
T ss_pred CCCCcceEEEcCCCcEEEcccCcccccccccc------------------------------------------------
Confidence 99999999999999999999999876441100
Q ss_pred ccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCcc
Q 001366 433 KYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTS 512 (1092)
Q Consensus 433 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~ 512 (1092)
........||+.|+|||++.+..++.+
T Consensus 247 -----------------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~ 273 (382)
T 3tt0_A 247 -----------------------------------------------------YKKTTNGRLPVKWMAPEALFDRIYTHQ 273 (382)
T ss_dssp -----------------------------------------------------TCCCTTCCCGGGGSCHHHHHSCCCCHH
T ss_pred -----------------------------------------------------cccccCCCCCcceeCHHHhcCCCCCch
Confidence 000113457888999999999999999
Q ss_pred ccchhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 513 SNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 513 sDIwSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
+|||||||+||||++ + |.... .......+.....++.....++.+.+|+.+||++||.+|||+.||+++-
T Consensus 274 ~DiwslG~il~ellt~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 347 (382)
T 3tt0_A 274 SDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 347 (382)
T ss_dssp HHHHHHHHHHHHHHTTSCCSSTTCC-HHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 999999999999998 4 33322 2223333333333334455688899999999999999999999999863
No 240
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.97 E-value=1.3e-30 Score=302.25 Aligned_cols=249 Identities=16% Similarity=0.196 Sum_probs=179.5
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.+|.|.||++... ..+..++.|+....... .......++..++...+|||++.+++......... ..
T Consensus 52 ~G~~g~Vy~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-----~~--- 119 (371)
T 4exu_A 52 SGAYGSVCSAIDK----RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR-----NF--- 119 (371)
T ss_dssp ECSSEEEEEEEET----TTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSST-----TC---
T ss_pred cCCCeEEEEEEEC----CCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcc-----cc---
Confidence 3478999999652 22556666665432222 22344556777888889999998877654332221 00
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.....+|+|+. ++|.+++.. .++..+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 120 --~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 120 --YDFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp --CCCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred --eeEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 01124789988 589888743 378889999999999999999999999999999999999999999999998865
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
...
T Consensus 194 ~~~----------------------------------------------------------------------------- 196 (371)
T 4exu_A 194 ADA----------------------------------------------------------------------------- 196 (371)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccc-----------------------------------------------------------------------------
Confidence 331
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~---f~~~~~ 534 (1092)
..+..+||++|+|||++.+ ..++.++|||||||+||||+++ |.+...
T Consensus 197 -----------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 247 (371)
T 4exu_A 197 -----------------------------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY 247 (371)
T ss_dssp --------------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred -----------------------------CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 0114568999999999988 7789999999999999999985 544333
Q ss_pred HHHHHHhccccCC-----------------------------CCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 535 LAAAMSDLRDRIL-----------------------------PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 535 ~~~~~~~~~~~~~-----------------------------p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
.......+..... +..+...++.+.+|+.+||++||.+|||+.|+|+||||
T Consensus 248 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f 327 (371)
T 4exu_A 248 LDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327 (371)
T ss_dssp HHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGG
T ss_pred HHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCccc
Confidence 2222222111000 01134557889999999999999999999999999999
Q ss_pred hhhhccc
Q 001366 586 NEFQEVC 592 (1092)
Q Consensus 586 ~~~~~~~ 592 (1092)
.......
T Consensus 328 ~~~~~~~ 334 (371)
T 4exu_A 328 EPFRDPE 334 (371)
T ss_dssp TTTCCGG
T ss_pred ccCCCcc
Confidence 8765544
No 241
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1.3e-28 Score=290.62 Aligned_cols=263 Identities=20% Similarity=0.310 Sum_probs=219.0
Q ss_pred ecCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCCCCC---cccccceeeecCCCCeEEEEEecCCCCEEEEEECC
Q 001366 775 FNNSANVICSISFDRD-EDHFAAAGVSKKIKIFEFNALFNDS---VDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYD 850 (1092)
Q Consensus 775 l~~h~~~V~sl~fspd-g~~latgg~D~~I~Iwd~~~~~~~~---~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~D 850 (1092)
...|...|++++|+|+ +.+||+|+.|+.|+||++....... ..........+|...|.+++|+|++..+|++|+.|
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 203 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD 203 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC
Confidence 4578899999999997 7899999999999999987521111 01223345567999999999999844499999999
Q ss_pred CcEEEEECCCCce-------EEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCC---ceeeeEe-cCCceEEE
Q 001366 851 GVVKLWDACTGQT-------VSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEK---NSLATIK-NIANVCCV 919 (1092)
Q Consensus 851 gtV~IWD~~tg~~-------i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~---~~l~~l~-~~~~V~sl 919 (1092)
|+|++||+.++.. ...+.+|...|.+++|+|.++.+|++++.|+.|++||++++ +.+..+. +...|+++
T Consensus 204 g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 283 (430)
T 2xyi_A 204 HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCL 283 (430)
T ss_dssp SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEE
T ss_pred CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEE
Confidence 9999999987421 45677899999999999977889999999999999999987 5666664 67889999
Q ss_pred EEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC-C-CEEEEEECCCeEEEEEcCCCCCCCC----
Q 001366 920 QFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD-S-GTLVTASTDNKLKLWDLKRTSHTGP---- 993 (1092)
Q Consensus 920 ~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~-~-~~L~Sgs~Dg~I~vWDl~~~~~~~~---- 993 (1092)
+|+|++..++++|+.||.|++||+++...++..+.+|...|.+++|++ + ..|++++.|+.|+|||+........
T Consensus 284 ~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 363 (430)
T 2xyi_A 284 SFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 363 (430)
T ss_dssp EECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHH
T ss_pred EeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcccc
Confidence 999999878999999999999999987777889999999999999994 3 3699999999999999985321100
Q ss_pred --CCCceeEEEcCCCCCeEEEEEecCCC-EEEEEecCCcEEEEeCCC
Q 001366 994 --STNACSLTFSGHTNEKNFVGLSTADG-YIACGSESNEVYAYHRSL 1037 (1092)
Q Consensus 994 --~~~~~~~~l~~h~~~V~~v~~spdg~-~lasgs~Dg~I~Iwd~~~ 1037 (1092)
.....+..+.+|...|++++|+|++. +|++++.||.|+||++..
T Consensus 364 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 364 EDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp HHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred ccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 01256778889999999999999999 899999999999998753
No 242
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.97 E-value=5.5e-31 Score=292.76 Aligned_cols=248 Identities=14% Similarity=0.082 Sum_probs=169.8
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||+|.....-. .+..++.|+..............++...+...+|||++.++.... +...
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~---- 90 (281)
T 1mp8_A 17 IELGRCIGEGQFGDVHQGIYMSPEN-PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV---- 90 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEECCC---CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC----
T ss_pred eEEEeEeeecCCeeEEEEEEecCCC-CceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc----
Confidence 4444433 4789999987632100 122344444433222333344556667788889999998776532 1111
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
..+|||++|++|.+++...+..++..+++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus 91 ------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~ 158 (281)
T 1mp8_A 91 ------------WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 158 (281)
T ss_dssp ------------EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEEC
T ss_pred ------------EEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEEC
Confidence 13899999999999998777678898999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++.......
T Consensus 159 Dfg~~~~~~~~~~------------------------------------------------------------------- 171 (281)
T 1mp8_A 159 DFGLSRYMEDSTY------------------------------------------------------------------- 171 (281)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred ccccccccCcccc-------------------------------------------------------------------
Confidence 9999876441100
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C--
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R-- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~-- 528 (1092)
.......+|+.|+|||.+.+..++.++|||||||++|||++ +
T Consensus 172 -----------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~ 216 (281)
T 1mp8_A 172 -----------------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 216 (281)
T ss_dssp ------------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCC
T ss_pred -----------------------------------cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCC
Confidence 00013346788999999998899999999999999999996 4
Q ss_pred -CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 -FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 -f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|....... .+..+.....++.....++.+.+|+.+||++||.+|||+.+++++
T Consensus 217 pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 270 (281)
T 1mp8_A 217 PFQGVKNND-VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 270 (281)
T ss_dssp TTTTCCGGG-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCcCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 43322111 112222222233344567889999999999999999999999874
No 243
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=2e-31 Score=307.09 Aligned_cols=257 Identities=18% Similarity=0.179 Sum_probs=180.4
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC---chhhHhhhhhhhhhccC-CCCCCCccccceecC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM---PSDAALKAAGAMMVASN-ASPKPVGVGTAVVSN 284 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 284 (1092)
+..|.+.+.++ |.|.||++...... ..+..++.|++..... ........++..++... .|||++.++.....+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 131 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGH-DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 131 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSST-TTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccC-CCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence 34566655554 78999998752211 1255566665432211 11122233444455555 699999876655433
Q ss_pred CCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc
Q 001366 285 GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~ 364 (1092)
...+ ++|||++|++|.++|...+ .++..+++.++.||+.||.|||++||+||||||+||||+.
T Consensus 132 ~~~~----------------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~ 194 (355)
T 1vzo_A 132 TKLH----------------LILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS 194 (355)
T ss_dssp TEEE----------------EEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred ceEE----------------EEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC
Confidence 3322 3899999999999997764 4778799999999999999999999999999999999999
Q ss_pred CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 365 ~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
++.+||+|||+++......
T Consensus 195 ~~~~kl~DfG~a~~~~~~~------------------------------------------------------------- 213 (355)
T 1vzo_A 195 NGHVVLTDFGLSKEFVADE------------------------------------------------------------- 213 (355)
T ss_dssp TSCEEESCSSEEEECCGGG-------------------------------------------------------------
T ss_pred CCcEEEeeCCCCeecccCC-------------------------------------------------------------
Confidence 9999999999987643100
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC--CCCCccccchhhhHHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--GVCTTSSNIYSLGVLF 522 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~--~~~t~~sDIwSLGvll 522 (1092)
.......+||+.|+|||++.+ ..++.++|||||||+|
T Consensus 214 -----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il 252 (355)
T 1vzo_A 214 -----------------------------------------TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLM 252 (355)
T ss_dssp -----------------------------------------GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHH
T ss_pred -----------------------------------------CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHH
Confidence 000114579999999999986 3478999999999999
Q ss_pred HHHcCC---CCcH---HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCC-----CHHHHhhhhhhhhh
Q 001366 523 FELFGR---FDSE---RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRP-----TTREILQSEVTNEF 588 (1092)
Q Consensus 523 ~ell~~---f~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rp-----sa~eiL~~~~~~~~ 588 (1092)
|||+++ |... .........+.. ..++.....++.+.+||.+||.+||.+|| ++.|+++||||...
T Consensus 253 ~ell~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~ 328 (355)
T 1vzo_A 253 YELLTGASPFTVDGEKNSQAEISRRILK-SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328 (355)
T ss_dssp HHHHHSSCTTSCTTSCCCHHHHHHHHHH-CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred HHHHHCCCCCccCCccchHHHHHHHHhc-cCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence 999986 4321 111112211111 12233344578889999999999999999 99999999999864
No 244
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.97 E-value=9e-31 Score=299.09 Aligned_cols=252 Identities=19% Similarity=0.145 Sum_probs=186.5
Q ss_pred hhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 212 SEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 212 ~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
..|.+.+.++ |.|.||++...+ .+..++.|+...... ........++..++...+|||++.++.....+...
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~----~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 116 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDAD----TKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV 116 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETT----TCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECC----CCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeE
Confidence 3455444444 789999997633 244555555432221 12233445566778888999999877665533322
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~ 367 (1092)
+ ++|||++|++|.++++..+ .++..+++.++.||+.||+|||++||+||||||+||+++.++.
T Consensus 117 ~----------------lv~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~ 179 (335)
T 2owb_A 117 F----------------VVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLE 179 (335)
T ss_dssp E----------------EEECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCC
T ss_pred E----------------EEEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCC
Confidence 2 3899999999999997754 5778899999999999999999999999999999999999999
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+||+|||+++......
T Consensus 180 ~kl~Dfg~~~~~~~~~---------------------------------------------------------------- 195 (335)
T 2owb_A 180 VKIGDFGLATKVEYDG---------------------------------------------------------------- 195 (335)
T ss_dssp EEECCCTTCEECCSTT----------------------------------------------------------------
T ss_pred EEEeeccCceecccCc----------------------------------------------------------------
Confidence 9999999987643100
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~ 527 (1092)
.......||+.|+|||++.+..++.++|||||||+||||++
T Consensus 196 ---------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~ 236 (335)
T 2owb_A 196 ---------------------------------------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 236 (335)
T ss_dssp ---------------------------------------CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHH
Confidence 00113568999999999999999999999999999999998
Q ss_pred C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 528 R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 528 ~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
+ |................. ......++.+.+|+.+||++||.+|||+.|+|+||||....
T Consensus 237 g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~ 299 (335)
T 2owb_A 237 GKPPFETSCLKETYLRIKKNEY--SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY 299 (335)
T ss_dssp SSCTTCCSSHHHHHHHHHHTCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred CcCCCCCCCHHHHHHHHhcCCC--CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCC
Confidence 6 444332222222222211 11224478899999999999999999999999999998753
No 245
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.97 E-value=3.1e-31 Score=297.37 Aligned_cols=251 Identities=13% Similarity=0.138 Sum_probs=180.7
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||++.... .+..++.|++...+ ........++..++...+|||++.++.....+...+
T Consensus 21 y~i~~~lg~G~~g~V~~~~~~~----~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~--- 92 (302)
T 2j7t_A 21 WEIVGELGDGAFGKVYKAKNKE----TGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW--- 92 (302)
T ss_dssp EEEEEEEECSTTCCEEEEEETT----TCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEE---
T ss_pred eeecceeccCCCeEEEEEEEcC----CCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEE---
Confidence 4444433 4789999998632 24455555553322 222334445666777889999998877655333222
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
++|||++|++|.+++......++..+++.++.||+.||.|||++||+||||||+||+++.++.+|++
T Consensus 93 -------------lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~ 159 (302)
T 2j7t_A 93 -------------IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLA 159 (302)
T ss_dssp -------------EEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEEC
T ss_pred -------------EEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEE
Confidence 3899999999999998766678888999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||++.......
T Consensus 160 Dfg~~~~~~~~~-------------------------------------------------------------------- 171 (302)
T 2j7t_A 160 DFGVSAKNLKTL-------------------------------------------------------------------- 171 (302)
T ss_dssp CCHHHHHHHHHH--------------------------------------------------------------------
T ss_pred ECCCCccccccc--------------------------------------------------------------------
Confidence 999875432100
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc-----CCCCCccccchhhhHHHHHHc
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS-----GGVCTTSSNIYSLGVLFFELF 526 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-----~~~~t~~sDIwSLGvll~ell 526 (1092)
.......||+.|+|||++. +..++.++|||||||++|||+
T Consensus 172 -----------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~ 216 (302)
T 2j7t_A 172 -----------------------------------QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 216 (302)
T ss_dssp -----------------------------------HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHH
T ss_pred -----------------------------------cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHh
Confidence 0001346899999999984 577899999999999999999
Q ss_pred CC---CCcHHHHHHHHHhccccCC-CCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 527 GR---FDSERALAAAMSDLRDRIL-PPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 527 ~~---f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
++ |.................. .......++.+.+|+.+||++||.+|||+.++++||||...
T Consensus 217 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 282 (302)
T 2j7t_A 217 QIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI 282 (302)
T ss_dssp HSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTC
T ss_pred cCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhh
Confidence 85 4333222222222222111 11223446789999999999999999999999999999875
No 246
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=4.2e-29 Score=291.44 Aligned_cols=295 Identities=13% Similarity=0.162 Sum_probs=202.1
Q ss_pred CEEEEEEc---CCCCEEEEEeCCCcEEEEEcCCCCCCCc--ccccceeeecCCCCeEEEEEecC----------------
Q 001366 781 VICSISFD---RDEDHFAAAGVSKKIKIFEFNALFNDSV--DVYYPAVEMSNRSKLSCVCWNNY---------------- 839 (1092)
Q Consensus 781 ~V~sl~fs---pdg~~latgg~D~~I~Iwd~~~~~~~~~--~~~~~~~~~~h~~~V~~v~~sp~---------------- 839 (1092)
...++.|. |++..+++++.|+.|.+|+......... ..........+...+.++.|++.
T Consensus 17 ~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (393)
T 4gq1_A 17 RPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVNS 96 (393)
T ss_dssp CEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC----------
T ss_pred CCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcceee
Confidence 34556774 4444445555688999998753211111 01111222334555555555432
Q ss_pred ---CCCEEEEEECCCcEEEEECCCCceEE-----EeeccCccEEEEEEecC-------CCCEEEEEeCCCcEEEEecCCC
Q 001366 840 ---IKNYLASADYDGVVKLWDACTGQTVS-----HYIEHEKRAWSVDFSQV-------HPTKLASGSDDCSVKLWNINEK 904 (1092)
Q Consensus 840 ---~~~~LaSgs~DgtV~IWD~~tg~~i~-----~l~~h~~~V~sv~fsp~-------~~~~laSgs~Dg~I~iWDl~~~ 904 (1092)
.+.+|++++.|++|+|||+.++.... .+.+|...|++|+|+|. ++.+|||||.|++|+|||++++
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 24579999999999999998886433 36789999999999872 5689999999999999999887
Q ss_pred ceeee-EecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcce------------------------EEecCCCCC
Q 001366 905 NSLAT-IKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPW------------------------CVLAGHEKA 959 (1092)
Q Consensus 905 ~~l~~-l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~------------------------~~l~~H~~~ 959 (1092)
.++.. +.+...|.+++|+|++.++|++|+.|++|++||+++.+... ....+|...
T Consensus 177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 256 (393)
T 4gq1_A 177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS 256 (393)
T ss_dssp EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS
T ss_pred ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc
Confidence 66554 45888999999999987799999999999999998764311 123468889
Q ss_pred eEEEEEc--CCCEEEEEECCCeEEEEEcCCCCCCCCC-----------CCceeEEEcCCCCCeEEEEEec--CCCEEEEE
Q 001366 960 VSYVKFL--DSGTLVTASTDNKLKLWDLKRTSHTGPS-----------TNACSLTFSGHTNEKNFVGLST--ADGYIACG 1024 (1092)
Q Consensus 960 V~~v~fs--~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~-----------~~~~~~~l~~h~~~V~~v~~sp--dg~~lasg 1024 (1092)
|.++.|. ++..|++++.|+++++||+......... ..........+...+. ..|+| ++.++++|
T Consensus 257 v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~sg 335 (393)
T 4gq1_A 257 LANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLG-ACPHPRYMDYFATAH 335 (393)
T ss_dssp CSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSC-CEECSSCTTEEEEEE
T ss_pred ceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCccee-EEEccCCCCEEEEEE
Confidence 9999996 6789999999999999999843211100 0001112222222222 23333 23467888
Q ss_pred ecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1025 SESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1025 s~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
+.|+.|++||...+..+... ..|...|.+|+|+|||++||+|+.+| +.+|+|
T Consensus 336 s~Dg~V~lwd~~~~~~~~~~--------------~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 336 SQHGLIQLINTYEKDSNSIP--------------IQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp TTTTEEEEEETTCTTCCEEE--------------EECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred CCCCEEEEEECCCCcEEEEe--------------cCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 89999999999888766543 24567899999999999999998665 666665
No 247
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.97 E-value=1.2e-30 Score=294.56 Aligned_cols=243 Identities=14% Similarity=0.088 Sum_probs=180.7
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
++.|.||++.... .+..++.|++.... ......++..++....|||++.++.....+...+
T Consensus 40 G~~g~Vy~~~~~~----~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~------------ 100 (314)
T 3com_A 40 GSYGSVYKAIHKE----TGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLW------------ 100 (314)
T ss_dssp ---CEEEEEEETT----TCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE------------
T ss_pred CCCeEEEEEEECC----CCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE------------
Confidence 3679999997632 24555666553322 2233455666778889999998777655433222
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
++|||++|++|.+++......++..+++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 101 ----lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 101 ----IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp ----EEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred ----EEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 3899999999999998666678888999999999999999999999999999999999999999999999887643
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
...
T Consensus 177 ~~~----------------------------------------------------------------------------- 179 (314)
T 3com_A 177 DTM----------------------------------------------------------------------------- 179 (314)
T ss_dssp TTB-----------------------------------------------------------------------------
T ss_pred hhc-----------------------------------------------------------------------------
Confidence 100
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHHHHHH
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSERALAA 537 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~~~ 537 (1092)
.......||+.|+|||.+.+..++.++|||||||+||||+++ |........
T Consensus 180 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 233 (314)
T 3com_A 180 --------------------------AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA 233 (314)
T ss_dssp --------------------------SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred --------------------------cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 001134689999999999999999999999999999999986 433222222
Q ss_pred HHHhccccC-CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 538 AMSDLRDRI-LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 538 ~~~~~~~~~-~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
......... ........++.+.+|+.+||++||.+|||+.++|+||||....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~ 286 (314)
T 3com_A 234 IFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK 286 (314)
T ss_dssp HHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred HHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence 222111111 1111223468899999999999999999999999999998754
No 248
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.97 E-value=7.7e-31 Score=291.36 Aligned_cols=245 Identities=16% Similarity=0.158 Sum_probs=179.9
Q ss_pred cccceeeeCCCCCccccccccccccccccccCc-----hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCC
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-----SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
++.|.||++.... .+..++.|+....... .......++..++...+|||++.+++........+
T Consensus 16 G~~g~V~~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~------- 84 (283)
T 3bhy_A 16 GQFAIVRKCRQKG----TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV------- 84 (283)
T ss_dssp CSSEEEEEEEETT----TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE-------
T ss_pred cCceEEEEEEEcC----CCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE-------
Confidence 4789999997632 2455555554322211 12233455666778889999998776654322222
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC----cEEEe
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN----QVKYI 371 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~----~vkl~ 371 (1092)
.+|||++|++|.+++.... .++..+++.++.||+.||.|||++||+||||||+||+++.++ .+|++
T Consensus 85 ---------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~ 154 (283)
T 3bhy_A 85 ---------LILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLI 154 (283)
T ss_dssp ---------EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEEC
T ss_pred ---------EEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEE
Confidence 3899999999999997654 577889999999999999999999999999999999998877 89999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++......
T Consensus 155 dfg~~~~~~~~~-------------------------------------------------------------------- 166 (283)
T 3bhy_A 155 DFGIAHKIEAGN-------------------------------------------------------------------- 166 (283)
T ss_dssp CCTTCEECC-----------------------------------------------------------------------
T ss_pred ecccceeccCCC--------------------------------------------------------------------
Confidence 999887643100
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR--- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~--- 528 (1092)
......||+.|+|||++.+..++.++|||||||++|||+++
T Consensus 167 ------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 210 (283)
T 3bhy_A 167 ------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210 (283)
T ss_dssp -----------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred ------------------------------------cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCC
Confidence 01134688999999999999999999999999999999985
Q ss_pred CCcHHHHHHHHHh--ccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 529 FDSERALAAAMSD--LRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 529 f~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
|............ ......++.+...++.+.+|+.+||++||.+|||+.++|+||||...+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 211 FLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp TCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred CCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 4443332222221 2111112223456788999999999999999999999999999987643
No 249
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=2.7e-29 Score=296.76 Aligned_cols=273 Identities=12% Similarity=0.119 Sum_probs=207.8
Q ss_pred cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeee
Q 001366 747 RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM 825 (1092)
Q Consensus 747 ~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fsp-dg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~ 825 (1092)
.++++.||.|++|++...+....+ .+.+|...|++|+|+| ++.+|++|+.|++|+|||+..... .......
T Consensus 135 lasGs~dg~i~lWd~~~~~~~~~~---~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~-----~~~~~~~ 206 (435)
T 4e54_B 135 VAVGSKGGDIMLWNFGIKDKPTFI---KGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNIL-----RVFASSD 206 (435)
T ss_dssp EEEEETTSCEEEECSSCCSCCEEE---CCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEE-----EEEECCS
T ss_pred EEEEeCCCEEEEEECCCCCceeEE---EccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCce-----eEEeccC
Confidence 447789999999998654433222 3568999999999998 689999999999999999864210 0001111
Q ss_pred cCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCc
Q 001366 826 SNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN 905 (1092)
Q Consensus 826 ~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~ 905 (1092)
.+...+.+++|+|+ +.+|++|+.||+|++||+. ++.+..+.+|...|++++|+|....+|++|+.|++|+|||+++.+
T Consensus 207 ~~~~~~~~~~~~~~-~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 207 TINIWFCSLDVSAS-SRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVR 284 (435)
T ss_dssp SCSCCCCCEEEETT-TTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCC
T ss_pred CCCccEEEEEECCC-CCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccccc
Confidence 23456889999998 8999999999999999985 566778889999999999999556689999999999999999876
Q ss_pred eeeeE----ecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCC------CeEEEEEc-CCCEEEEE
Q 001366 906 SLATI----KNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEK------AVSYVKFL-DSGTLVTA 974 (1092)
Q Consensus 906 ~l~~l----~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~------~V~~v~fs-~~~~L~Sg 974 (1092)
....+ .|...|++++|+|++. +|++|+.|+.|++||++++..+ ..+..|.. .+..+.|+ .+..++++
T Consensus 285 ~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~~~D~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (435)
T 4e54_B 285 GKASFLYSLPHRHPVNAACFSPDGA-RLLTTDQKSEIRVYSASQWDCP-LGLIPHPHRHFQHLTPIKAAWHPRYNLIVVG 362 (435)
T ss_dssp SSSCCSBCCBCSSCEEECCBCTTSS-EEEEEESSSCEEEEESSSSSSE-EEECCCCCCCCSSSCCCBCEECSSSSCEEEE
T ss_pred ccceEEEeeeccccccceeECCCCC-eeEEEcCCCEEEEEECCCCccc-eEEecccccccccceeEEEEEcCCCCEEEEE
Confidence 55443 3678899999999995 8999999999999999987653 34444432 12234454 33444444
Q ss_pred E------------CCCeEEEEEcCCCCCCCCCCCceeEEEc-CCCCCeEEE-EEecCCCEEEEEecCCcEEEEeCCCCCc
Q 001366 975 S------------TDNKLKLWDLKRTSHTGPSTNACSLTFS-GHTNEKNFV-GLSTADGYIACGSESNEVYAYHRSLPMP 1040 (1092)
Q Consensus 975 s------------~Dg~I~vWDl~~~~~~~~~~~~~~~~l~-~h~~~V~~v-~~spdg~~lasgs~Dg~I~Iwd~~~~~~ 1040 (1092)
+ .++.|++||.. ++.++..+. +|...|.++ +|+|+|.+||+|+ |+.|+||+...+++
T Consensus 363 ~~~d~~~~~~~~~~~~~i~iwd~~--------~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 363 RYPDPNFKSCTPYELRTIDVFDGN--------SGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp CCCCTTSCCSSTTCCCCEEEECSS--------SCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred EcCCCCeEEEEecCCCEEEEEECC--------CCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 3 34679999998 345566654 688888887 6999999999887 78999999887654
No 250
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.97 E-value=9e-31 Score=297.70 Aligned_cols=246 Identities=15% Similarity=0.177 Sum_probs=174.5
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCC-CCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNA-SPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+.+.++ |.|.||++... ..+..++.|+... .......++..++...+ |||++.+++.......
T Consensus 37 ~y~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~--- 105 (330)
T 3nsz_A 37 DYQLVRKLGRGKYSEVFEAINI----TNNEKVVVKILKP----VKKKKIKREIKILENLRGGPNIITLADIVKDPVS--- 105 (330)
T ss_dssp GEEEEEEEEECSSEEEEEEEET----TTCCEEEEEEECS----CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTT---
T ss_pred ceEEEEEecccCCeEEEEEEEC----CCCcEEEEEEecc----cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCC---
Confidence 355544444 78999999642 1245566666532 12233445555666665 9999987766442111
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC-cE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN-QV 368 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~-~v 368 (1092)
...+ .+|||+.|++|.++++. ++..+++.++.||+.||+|||++||+||||||+|||++.++ .+
T Consensus 106 ----~~~~-------lv~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~ 170 (330)
T 3nsz_A 106 ----RTPA-------LVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 170 (330)
T ss_dssp ----CCEE-------EEEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEE
T ss_pred ----CceE-------EEEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEE
Confidence 1111 37999999999999853 67779999999999999999999999999999999999777 89
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++.....
T Consensus 171 kl~Dfg~a~~~~~~------------------------------------------------------------------ 184 (330)
T 3nsz_A 171 RLIDWGLAEFYHPG------------------------------------------------------------------ 184 (330)
T ss_dssp EECCCTTCEECCTT------------------------------------------------------------------
T ss_pred EEEeCCCceEcCCC------------------------------------------------------------------
Confidence 99999998764310
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~ 527 (1092)
.......||++|+|||++.+ ..++.++|||||||+||||++
T Consensus 185 --------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~ 226 (330)
T 3nsz_A 185 --------------------------------------QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 226 (330)
T ss_dssp --------------------------------------CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHh
Confidence 00114568999999999987 678999999999999999998
Q ss_pred C---CC-cHHHHHHHHH---hc---------c--ccCCC---------------------CCCCCCChhHHHHHHhcccc
Q 001366 528 R---FD-SERALAAAMS---DL---------R--DRILP---------------------PSFLSENPKEAGFCLWQLHP 568 (1092)
Q Consensus 528 ~---f~-~~~~~~~~~~---~~---------~--~~~~p---------------------~~~~~~~~~~~~li~~lL~~ 568 (1092)
+ |. .......... .+ . ....+ ......++.+.+||.+||++
T Consensus 227 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 306 (330)
T 3nsz_A 227 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRY 306 (330)
T ss_dssp TCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCS
T ss_pred CCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcC
Confidence 5 31 1111111100 00 0 00001 11112578899999999999
Q ss_pred CCCCCCCHHHHhhhhhhhhh
Q 001366 569 EPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 569 dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
||.+|||++|+|+||||...
T Consensus 307 dP~~Rpta~e~l~hp~f~~~ 326 (330)
T 3nsz_A 307 DHQSRLTAREAMEHPYFYTV 326 (330)
T ss_dssp SGGGSCCHHHHHTSGGGTTC
T ss_pred CcccCCCHHHHhcCccHhhh
Confidence 99999999999999999875
No 251
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.97 E-value=2.9e-31 Score=305.54 Aligned_cols=260 Identities=17% Similarity=0.131 Sum_probs=172.0
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+.+.++ |.|.||++.... .+..++.|++..... ......++...+...+|||++.++..........
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~~--~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~-- 95 (360)
T 3e3p_A 24 RFQVERMAGQGTFGTVQLGKEKS----TGMSVAIKKVIQDPR--FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD-- 95 (360)
T ss_dssp TEEEC----------CEEEEETT----TCCEEEEEEEECCTT--CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC--
T ss_pred ceEEEEEEecCCCeEEEEEEECC----CCCEEEEEEEecCcc--ccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc--
Confidence 455554444 789999997622 245566665432211 1122334444456678999998766644322111
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHh---hcCCCCCHHHHHHHHHHHHHHHHHhh--hcCccccCCCCCCeEEcc-
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLN---ARGHKGKRIECLYIFRQIVALVDYHH--TQGVTFLDLKPSSFKLLQ- 364 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~---~~~~~~~~~~~~~i~~qil~~l~~lH--s~gIvHrDLKP~Nill~~- 364 (1092)
.... . ..++|||++|+ |.+.+. .....++...+..++.||+.||.||| ++||+||||||+||||+.
T Consensus 96 -~~~~-~-----~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 96 -RRDI-Y-----LNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA 167 (360)
T ss_dssp -TTCE-E-----EEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETT
T ss_pred -ccce-e-----EEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCC
Confidence 0000 0 11379999974 444443 23456778899999999999999999 999999999999999997
Q ss_pred CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 365 ~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
++.+||+|||+++......
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~------------------------------------------------------------- 186 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSPSE------------------------------------------------------------- 186 (360)
T ss_dssp TTEEEECCCTTCBCCCTTS-------------------------------------------------------------
T ss_pred CCcEEEeeCCCceecCCCC-------------------------------------------------------------
Confidence 8999999999987643100
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC-CCCccccchhhhHHHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG-VCTTSSNIYSLGVLFF 523 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~t~~sDIwSLGvll~ 523 (1092)
......||++|+|||++.+. .++.++|||||||+||
T Consensus 187 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ 223 (360)
T 3e3p_A 187 -------------------------------------------PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFA 223 (360)
T ss_dssp -------------------------------------------CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred -------------------------------------------CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHH
Confidence 01145689999999999774 4899999999999999
Q ss_pred HHcCC---CCcHHHHHHHHHhcccc------------------------------CCCCCCCCCChhHHHHHHhccccCC
Q 001366 524 ELFGR---FDSERALAAAMSDLRDR------------------------------ILPPSFLSENPKEAGFCLWQLHPEP 570 (1092)
Q Consensus 524 ell~~---f~~~~~~~~~~~~~~~~------------------------------~~p~~~~~~~~~~~~li~~lL~~dP 570 (1092)
||+++ |.+...........+.. .++......++.+.+|+.+||++||
T Consensus 224 ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 303 (360)
T 3e3p_A 224 EMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLP 303 (360)
T ss_dssp HHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSG
T ss_pred HHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCc
Confidence 99986 54433332222222110 0111222345778999999999999
Q ss_pred CCCCCHHHHhhhhhhhhhhccc
Q 001366 571 LSRPTTREILQSEVTNEFQEVC 592 (1092)
Q Consensus 571 ~~Rpsa~eiL~~~~~~~~~~~~ 592 (1092)
.+|||+.|+|+||||.+.....
T Consensus 304 ~~Rpt~~e~l~hp~f~~~~~~~ 325 (360)
T 3e3p_A 304 EERMKPYEALCHPYFDELHDPA 325 (360)
T ss_dssp GGSCCHHHHTTSGGGGGGGCTT
T ss_pred cccCCHHHHhcCccccccCCcc
Confidence 9999999999999999876544
No 252
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.97 E-value=7.4e-31 Score=304.24 Aligned_cols=258 Identities=15% Similarity=0.180 Sum_probs=176.4
Q ss_pred hHHHhhhcc--ccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+.+.++ |.|.||++... ..+..++.|+..... .........++..++...+|||++.++..........
T Consensus 26 ~y~~~~~lG~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~- 100 (371)
T 2xrw_A 26 RYQNLKPIGSGAQGIVCAAYDA----ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE- 100 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEET----TTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTT-
T ss_pred heeEeeeeEecCCEEEEEEEEC----CCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccc-
Confidence 455555554 78999999652 124556666553322 2223344556777888889999998776644322111
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
.... ..++|||++| +|.+++.. .++..++..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 101 ----~~~~-----~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~k 167 (371)
T 2xrw_A 101 ----EFQD-----VYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 167 (371)
T ss_dssp ----TCCE-----EEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEE
T ss_pred ----cccc-----eEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEE
Confidence 0000 1248999986 79998863 377889999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+++.....
T Consensus 168 l~Dfg~a~~~~~~------------------------------------------------------------------- 180 (371)
T 2xrw_A 168 ILDFGLARTAGTS------------------------------------------------------------------- 180 (371)
T ss_dssp ECCCCC--------------------------------------------------------------------------
T ss_pred EEEeecccccccc-------------------------------------------------------------------
Confidence 9999998753310
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC-
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~- 528 (1092)
...+..+||+.|+|||++.+..++.++|||||||+||||+++
T Consensus 181 -------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 223 (371)
T 2xrw_A 181 -------------------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223 (371)
T ss_dssp ----------------------------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred -------------------------------------cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence 001145789999999999999999999999999999999985
Q ss_pred --CCcHHHHHHHHHhccccCCC-------------------CCC--------------CC-------CChhHHHHHHhcc
Q 001366 529 --FDSERALAAAMSDLRDRILP-------------------PSF--------------LS-------ENPKEAGFCLWQL 566 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p-------------------~~~--------------~~-------~~~~~~~li~~lL 566 (1092)
|.+..........+.....| +.+ +. .++.+.+|+.+||
T Consensus 224 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL 303 (371)
T 2xrw_A 224 VLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 303 (371)
T ss_dssp CSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHC
Confidence 65544433333222211100 000 00 1356789999999
Q ss_pred ccCCCCCCCHHHHhhhhhhhhhhccc
Q 001366 567 HPEPLSRPTTREILQSEVTNEFQEVC 592 (1092)
Q Consensus 567 ~~dP~~Rpsa~eiL~~~~~~~~~~~~ 592 (1092)
.+||.+|||++|+|+||||.......
T Consensus 304 ~~dP~~R~t~~e~l~hp~~~~~~~~~ 329 (371)
T 2xrw_A 304 VIDASKRISVDEALQHPYINVWYDPS 329 (371)
T ss_dssp CSSGGGSCCHHHHHHSHHHHTTCCHH
T ss_pred cCChhhCCCHHHHhCCcchhhhcCcc
Confidence 99999999999999999998654433
No 253
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.8e-28 Score=286.47 Aligned_cols=288 Identities=15% Similarity=0.050 Sum_probs=220.8
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC---C-CCccccc-----------------------------------
Q 001366 780 NVICSISFDRDEDHFAAAGVSKKIKIFEFNALF---N-DSVDVYY----------------------------------- 820 (1092)
Q Consensus 780 ~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~---~-~~~~~~~----------------------------------- 820 (1092)
.++.+++|+|+|++|+++ .++.|++||+.+.. . .......
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 478899999999977666 57899999986532 0 0000000
Q ss_pred -----------ceeeecCCCCeEEEEEecCCCCEE-EEEECCCcEEEEECC--CCceEEEee--ccCccEEEEEEecCCC
Q 001366 821 -----------PAVEMSNRSKLSCVCWNNYIKNYL-ASADYDGVVKLWDAC--TGQTVSHYI--EHEKRAWSVDFSQVHP 884 (1092)
Q Consensus 821 -----------~~~~~~h~~~V~~v~~sp~~~~~L-aSgs~DgtV~IWD~~--tg~~i~~l~--~h~~~V~sv~fsp~~~ 884 (1092)
......|...|.+++|+|+ +.+| ++|+.||+|+|||+. +++.+..+. .|...|++++|+| ++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~ 161 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSD-ESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE-DD 161 (450)
T ss_dssp ----------------CCCCCEEEEEECTT-SSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT-TS
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCC-CCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC-CC
Confidence 0001134557999999998 7775 899999999999999 888888886 5678899999999 88
Q ss_pred CEEEEEeCCCcEEEEecCCCceee----eEe-cCCceEEEEEccC---CCeEEEEEECCCeEEEEEcCCCCcceEEecCC
Q 001366 885 TKLASGSDDCSVKLWNINEKNSLA----TIK-NIANVCCVQFSAH---SSHLLAFGSADYRTYCYDLRNARAPWCVLAGH 956 (1092)
Q Consensus 885 ~~laSgs~Dg~I~iWDl~~~~~l~----~l~-~~~~V~sl~fsp~---~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H 956 (1092)
.+|++|+.|+.|++||+.++.... .+. |...|++++|+|+ + .+|++|+.|+.|++||++++......+.+|
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h 240 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGH-QFIITSDRDEHIKISHYPQCFIVDKWLFGH 240 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSC-EEEEEEETTSCEEEEEESCTTCEEEECCCC
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCC-cEEEEEcCCCcEEEEECCCCceeeeeecCC
Confidence 999999999999999999877553 444 6788999999999 6 599999999999999999876544446799
Q ss_pred CCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEc-------------------------CCCCCeEE
Q 001366 957 EKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFS-------------------------GHTNEKNF 1011 (1092)
Q Consensus 957 ~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~-------------------------~h~~~V~~ 1011 (1092)
...|.+++|+++.+|++++.|++|++||+.+ +.++..+. .+...|..
T Consensus 241 ~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 312 (450)
T 2vdu_B 241 KHFVSSICCGKDYLLLSAGGDDKIFAWDWKT--------GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSK 312 (450)
T ss_dssp SSCEEEEEECSTTEEEEEESSSEEEEEETTT--------CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEE
T ss_pred CCceEEEEECCCCEEEEEeCCCeEEEEECCC--------CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEE
Confidence 9999999999777999999999999999984 34455554 23457899
Q ss_pred EEEecCCCEEEEEe-cCCcEEEEeC--CCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEec------
Q 001366 1012 VGLSTADGYIACGS-ESNEVYAYHR--SLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANS------ 1082 (1092)
Q Consensus 1012 v~~spdg~~lasgs-~Dg~I~Iwd~--~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~------ 1082 (1092)
++|+|++++|++++ .|+.|+||++ ..+..+.... ....| ..|.+++|+|++.++++++.
T Consensus 313 i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~-----------~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~ 380 (450)
T 2vdu_B 313 IIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQ-----------IITFP-YNVISLSAHNDEFQVTLDNKESSGVQ 380 (450)
T ss_dssp EEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEE-----------EEECS-SCEEEEEEETTEEEEEECCTTCCSSC
T ss_pred EEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeecc-----------EeccC-CceEEEEecCCcEEEEEecccCCCCC
Confidence 99999999999999 8999999998 4442222111 11234 67999999996544444443
Q ss_pred CCeEEEEEc
Q 001366 1083 SGCIKVLQM 1091 (1092)
Q Consensus 1083 DG~V~vW~l 1091 (1092)
+..|.||.+
T Consensus 381 ~~~i~v~~~ 389 (450)
T 2vdu_B 381 KNFAKFIEY 389 (450)
T ss_dssp CCSEEEEEE
T ss_pred CcceEEEEE
Confidence 456888864
No 254
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=7.5e-31 Score=300.31 Aligned_cols=253 Identities=12% Similarity=0.070 Sum_probs=179.5
Q ss_pred HHHhhhc--cccceeeeCCCCCc-cccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNA-FKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 289 (1092)
|.+.+.+ +|.|.||++..... -...+..++.|+..............++..++... .|||++.++.....+...+
T Consensus 47 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~- 125 (344)
T 1rjb_A 47 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIY- 125 (344)
T ss_dssp EEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE-
T ss_pred ceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccE-
Confidence 4444443 47899999874110 01113445555553322222334455666667777 8999998877655433322
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCC----------------------CCCHHHHHHHHHHHHHHHHHhhh
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH----------------------KGKRIECLYIFRQIVALVDYHHT 347 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~----------------------~~~~~~~~~i~~qil~~l~~lHs 347 (1092)
++|||++|++|.++|..... .++..+++.++.||+.||+|||+
T Consensus 126 ---------------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~ 190 (344)
T 1rjb_A 126 ---------------LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF 190 (344)
T ss_dssp ---------------EEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------EEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh
Confidence 38999999999999976543 26788899999999999999999
Q ss_pred cCccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCccccccc
Q 001366 348 QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWW 427 (1092)
Q Consensus 348 ~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (1092)
+||+||||||+|||++.++.+||+|||+++.......
T Consensus 191 ~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------- 227 (344)
T 1rjb_A 191 KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN------------------------------------------- 227 (344)
T ss_dssp TTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT-------------------------------------------
T ss_pred CCcccCCCChhhEEEcCCCcEEeCCCccCcccccCcc-------------------------------------------
Confidence 9999999999999999999999999999876541100
Q ss_pred ccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC
Q 001366 428 SLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG 507 (1092)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~ 507 (1092)
........||+.|+|||.+.+.
T Consensus 228 ----------------------------------------------------------~~~~~~~~~t~~y~aPE~~~~~ 249 (344)
T 1rjb_A 228 ----------------------------------------------------------YVVRGNARLPVKWMAPESLFEG 249 (344)
T ss_dssp ----------------------------------------------------------SEEETTEEECGGGCCHHHHHHC
T ss_pred ----------------------------------------------------------ceeccCccCccCccCHHHhccC
Confidence 0001134578899999999999
Q ss_pred CCCccccchhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 508 VCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 508 ~~t~~sDIwSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
.++.++|||||||+||||++ + |............+.....++.....++.+.+|+.+||++||.+|||+.+++++.
T Consensus 250 ~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l 329 (344)
T 1rjb_A 250 IYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329 (344)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 99999999999999999997 5 4332222222233333333334445678899999999999999999999999875
No 255
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.97 E-value=6.7e-31 Score=305.32 Aligned_cols=248 Identities=16% Similarity=0.137 Sum_probs=180.7
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
+|.+.+.+ ++.|.||+|.... .+..++.|+..............++..++...+|||++.++.....+...+
T Consensus 115 ~~~~~~~lG~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~-- 188 (377)
T 3cbl_A 115 DLVLGEQIGRGNFGEVFSGRLRA----DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIY-- 188 (377)
T ss_dssp GEEEEEEEEEETTEEEEEEEETT----TCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCE--
T ss_pred HeEEeeEeccCCCCeEEEEEEec----CCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcE--
Confidence 44444444 4789999998731 245566665533222222234456677788889999998877654333333
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
++|||++|++|.++|+..+..++..+++.++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus 189 --------------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl 254 (377)
T 3cbl_A 189 --------------IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKI 254 (377)
T ss_dssp --------------EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred --------------EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEE
Confidence 389999999999999877667888899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++...+....
T Consensus 255 ~DfG~s~~~~~~~~~----------------------------------------------------------------- 269 (377)
T 3cbl_A 255 SDFGMSREEADGVYA----------------------------------------------------------------- 269 (377)
T ss_dssp CCGGGCEECTTSEEE-----------------------------------------------------------------
T ss_pred CcCCCceecCCCcee-----------------------------------------------------------------
Confidence 999998763310000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~- 528 (1092)
.......++..|+|||.+.+..++.++|||||||+||||++ +
T Consensus 270 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~ 313 (377)
T 3cbl_A 270 ------------------------------------ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGA 313 (377)
T ss_dssp ------------------------------------CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred ------------------------------------ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 00002235677999999998899999999999999999997 4
Q ss_pred --CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|........ ...+.....++.....++.+.+|+.+||+.||.+|||+.+|++.
T Consensus 314 ~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 368 (377)
T 3cbl_A 314 SPYPNLSNQQT-REFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQE 368 (377)
T ss_dssp CSSTTSCHHHH-HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCHHHH-HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 433322222 22222222223333457888999999999999999999999863
No 256
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=2.5e-28 Score=288.16 Aligned_cols=272 Identities=18% Similarity=0.336 Sum_probs=224.0
Q ss_pred CCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCccccccee
Q 001366 744 PTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAV 823 (1092)
Q Consensus 744 ~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~ 823 (1092)
....++++.|+.+++|+....+... .+.+|...|.+++| ++++|++|+.|++|+|||+.+. .....
T Consensus 143 ~~~l~~g~~dg~i~iwd~~~~~~~~-----~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~-------~~~~~ 208 (435)
T 1p22_A 143 DQKIVSGLRDNTIKIWDKNTLECKR-----ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG-------EMLNT 208 (435)
T ss_dssp SSEEEEEESSSCEEEEESSSCCEEE-----EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC-------CEEEE
T ss_pred CCEEEEEeCCCeEEEEeCCCCeEEE-----EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC-------cEEEE
Confidence 3445678899999999988766544 35589999999998 7889999999999999998752 22234
Q ss_pred eecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceE---EEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEe
Q 001366 824 EMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTV---SHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900 (1092)
Q Consensus 824 ~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i---~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWD 900 (1092)
..+|...|.+++|++ ..|++|+.||+|++||+.++..+ ..+.+|...|.+++| ++..+++|+.|++|++||
T Consensus 209 ~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~i~vwd 282 (435)
T 1p22_A 209 LIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWN 282 (435)
T ss_dssp ECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---ETTEEEEEETTSEEEEEE
T ss_pred EcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---CCCEEEEEeCCCeEEEEE
Confidence 457899999999975 49999999999999999987654 677899999999999 457999999999999999
Q ss_pred cCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCe
Q 001366 901 INEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNK 979 (1092)
Q Consensus 901 l~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~ 979 (1092)
+++++++.++. +...|.+++|+ + .++++|+.||.|++||+++++ .+..+.+|...|.+++| ++.+|++|+.||.
T Consensus 283 ~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~g~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~~~~-~~~~l~sg~~dg~ 357 (435)
T 1p22_A 283 TSTCEFVRTLNGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF-DNKRIVSGAYDGK 357 (435)
T ss_dssp TTTCCEEEEEECCSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEC-CSSEEEEEETTSC
T ss_pred CCcCcEEEEEcCCCCcEEEEEeC--C-CEEEEEeCCCeEEEEECCCCC-EEEEEeCCcCcEEEEEe-cCCEEEEEeCCCc
Confidence 99999999888 67789999995 3 489999999999999999875 46788999999999999 6889999999999
Q ss_pred EEEEEcCCCCCCC-CCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCcee
Q 001366 980 LKLWDLKRTSHTG-PSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPIT 1042 (1092)
Q Consensus 980 I~vWDl~~~~~~~-~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~ 1042 (1092)
|++||+....... .....++..+.+|...|++++| ++.+|++|+.||.|++||+.......
T Consensus 358 i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 358 IKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQ 419 (435)
T ss_dssp EEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC--------
T ss_pred EEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 9999997433111 1112378889999999999999 78899999999999999987765443
No 257
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.97 E-value=1.5e-30 Score=290.72 Aligned_cols=247 Identities=18% Similarity=0.135 Sum_probs=178.2
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..+|.|.||+|.... .+..++.|+....+ ........++..++...+|||++.++.....+...+
T Consensus 31 g~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~---------- 95 (295)
T 2clq_A 31 GKGTYGIVYAGRDLS----NQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIK---------- 95 (295)
T ss_dssp EECSSSEEEEEEETT----TCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE----------
T ss_pred eecCcEEEEEEEECC----CCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEE----------
Confidence 446789999998521 24455665543322 222234455667788889999998777654433322
Q ss_pred cccCCCcccccCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc-CCcEEEecccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARG--HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ-SNQVKYIGPII 375 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~--~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~-~~~vkl~Dfg~ 375 (1092)
++|||++|++|.+++.... ...+...+..++.||+.||+|||++||+||||||+||+++. ++.+||+|||+
T Consensus 96 ------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~ 169 (295)
T 2clq_A 96 ------IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGT 169 (295)
T ss_dssp ------EEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTT
T ss_pred ------EEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeeccc
Confidence 3899999999999997653 24567788899999999999999999999999999999987 89999999998
Q ss_pred cccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCC
Q 001366 376 QKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSH 455 (1092)
Q Consensus 376 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 455 (1092)
++......
T Consensus 170 ~~~~~~~~------------------------------------------------------------------------ 177 (295)
T 2clq_A 170 SKRLAGIN------------------------------------------------------------------------ 177 (295)
T ss_dssp CEESCC--------------------------------------------------------------------------
T ss_pred ccccCCCC------------------------------------------------------------------------
Confidence 87643100
Q ss_pred CCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC--CCccccchhhhHHHHHHcCC---CC
Q 001366 456 NDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV--CTTSSNIYSLGVLFFELFGR---FD 530 (1092)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~--~t~~sDIwSLGvll~ell~~---f~ 530 (1092)
.......||+.|+|||++.+.. ++.++|||||||+||||+++ |.
T Consensus 178 -------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 226 (295)
T 2clq_A 178 -------------------------------PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 226 (295)
T ss_dssp ----------------------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTG
T ss_pred -------------------------------CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCcc
Confidence 0001346899999999997754 89999999999999999986 32
Q ss_pred cHHHH-HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 531 SERAL-AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 531 ~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
..... ............++.....++.+.+|+.+||++||.+||++.++|+||||....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 227 ELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp GGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred CCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 22111 111111122222333345678899999999999999999999999999998653
No 258
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.97 E-value=1.5e-30 Score=291.63 Aligned_cols=252 Identities=16% Similarity=0.173 Sum_probs=183.5
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccC-c-hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-P-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
|.+.+.++ |.|.||++... ..+..++.|+...... . .......++...+...+|||++.+++....+...+
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~- 87 (294)
T 4eqm_A 13 YKIVDKLGGGGMSTVYLAEDT----ILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYY- 87 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEET----TTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEE-
T ss_pred EEEEEEEccCCCEEEEEEEEC----CCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEE-
Confidence 55555554 78999999752 1245566655422222 2 12234456667788889999998877654333333
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
.+|||++|++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+||+++.++.+|
T Consensus 88 ---------------lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~k 151 (294)
T 4eqm_A 88 ---------------LVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLK 151 (294)
T ss_dssp ---------------EEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEE
T ss_pred ---------------EEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 3899999999999998765 477889999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+++......
T Consensus 152 l~Dfg~~~~~~~~~------------------------------------------------------------------ 165 (294)
T 4eqm_A 152 IFDFGIAKALSETS------------------------------------------------------------------ 165 (294)
T ss_dssp ECCCSSSTTC----------------------------------------------------------------------
T ss_pred EEeCCCcccccccc------------------------------------------------------------------
Confidence 99999987643100
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC-
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~- 528 (1092)
.......+||+.|+|||++.+..++.++|||||||++|||+++
T Consensus 166 ------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~ 209 (294)
T 4eqm_A 166 ------------------------------------LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209 (294)
T ss_dssp ---------------------------------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred ------------------------------------ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence 0001145789999999999999999999999999999999985
Q ss_pred --CCcHHHHHHHHHhccccCCC---CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 529 --FDSERALAAAMSDLRDRILP---PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p---~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|............+.....+ ......++.+.+++.+||++||.+||+..+.+.++|..-.
T Consensus 210 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 210 PPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp CSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred CCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 65555555545444443222 1234567889999999999999999977777777776543
No 259
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.9e-30 Score=290.32 Aligned_cols=249 Identities=15% Similarity=0.093 Sum_probs=178.8
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..+|.|.||+|...+.-.. +..++.|+..............++..++...+|||++.++........ .+.
T Consensus 30 g~G~~g~Vy~~~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--------~~~- 99 (298)
T 3pls_A 30 GKGHFGVVYHGEYIDQAQN-RIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG--------LPH- 99 (298)
T ss_dssp EEETTEEEEEEEEECSSSC-EEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS--------CCE-
T ss_pred ccCCCceEEEEEEecCCCc-eeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC--------CcE-
Confidence 3468899999874221111 223444544332233333445567777888899999987765432211 111
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+|+|+.|++|.+++...+..++..+++.++.||+.||.|||++||+||||||+||+++.++.+|++|||+++.
T Consensus 100 ------~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 100 ------VLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp ------EEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred ------EEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 38999999999999988777788889999999999999999999999999999999999999999999999876
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.......
T Consensus 174 ~~~~~~~------------------------------------------------------------------------- 180 (298)
T 3pls_A 174 ILDREYY------------------------------------------------------------------------- 180 (298)
T ss_dssp TTTGGGG-------------------------------------------------------------------------
T ss_pred ccCCccc-------------------------------------------------------------------------
Confidence 4411000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC-CC--cHHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR-FD--SERAL 535 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~-f~--~~~~~ 535 (1092)
.........+|+.|+|||.+.+..++.++|||||||++|||+++ .+ .....
T Consensus 181 --------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~ 234 (298)
T 3pls_A 181 --------------------------SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP 234 (298)
T ss_dssp --------------------------CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG
T ss_pred --------------------------ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH
Confidence 00001144678899999999999999999999999999999983 21 11111
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
......+.....++.....++.+.+|+.+||++||.+|||+.++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 281 (298)
T 3pls_A 235 FDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGE 281 (298)
T ss_dssp GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 12222222222333344457889999999999999999999999874
No 260
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.96 E-value=1.8e-30 Score=296.77 Aligned_cols=252 Identities=15% Similarity=0.085 Sum_probs=183.0
Q ss_pred hHHHhhhc--cccceeeeCCCCCcc-ccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAF-KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+.+.+ +|.|.||++...+.. ...+..++.|+..............++..++...+|||++.++.....+...+
T Consensus 48 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~- 126 (343)
T 1luf_A 48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC- 126 (343)
T ss_dssp GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE-
T ss_pred HCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceE-
Confidence 34444444 378999999863211 01235566666543333333344556777788889999998776644332222
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHhh
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-----------------------HKGKRIECLYIFRQIVALVDYHH 346 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-----------------------~~~~~~~~~~i~~qil~~l~~lH 346 (1092)
++|||++|++|.++|.... ..++..+++.|+.||+.||.|||
T Consensus 127 ---------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH 191 (343)
T 1luf_A 127 ---------------LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS 191 (343)
T ss_dssp ---------------EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------EEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3899999999999997642 46788899999999999999999
Q ss_pred hcCccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccc
Q 001366 347 TQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRW 426 (1092)
Q Consensus 347 s~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (1092)
++||+||||||+|||++.++.+||+|||+++.......
T Consensus 192 ~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------ 229 (343)
T 1luf_A 192 ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY------------------------------------------ 229 (343)
T ss_dssp HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGC------------------------------------------
T ss_pred hCCeecCCCCcceEEECCCCeEEEeecCCCcccccCcc------------------------------------------
Confidence 99999999999999999999999999999876541100
Q ss_pred cccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC
Q 001366 427 WSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG 506 (1092)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~ 506 (1092)
........||+.|+|||++.+
T Consensus 230 -----------------------------------------------------------~~~~~~~~~t~~y~aPE~~~~ 250 (343)
T 1luf_A 230 -----------------------------------------------------------YKADGNDAIPIRWMPPESIFY 250 (343)
T ss_dssp -----------------------------------------------------------BC----CCBCGGGCCHHHHHH
T ss_pred -----------------------------------------------------------ccccCCCcccceecChhhhcc
Confidence 000113457889999999999
Q ss_pred CCCCccccchhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 507 GVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 507 ~~~t~~sDIwSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
..++.++|||||||++|||++ + |...... .....+.....++.....++.+.+|+.+||+.||.+||++.+++++
T Consensus 251 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~ 329 (343)
T 1luf_A 251 NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE-EVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI 329 (343)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCcCcccccHHHHHHHHHHHhcCCCcCCCCChH-HHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 899999999999999999998 4 4333222 2222333333333344567889999999999999999999999874
No 261
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.96 E-value=8.4e-31 Score=295.55 Aligned_cols=249 Identities=11% Similarity=0.145 Sum_probs=177.0
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|.||++.... .+..++.|+.... .........++..++...+|||++.++.....+...+
T Consensus 20 ~G~~g~V~~~~~~~----~~~~va~K~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~----------- 83 (310)
T 3s95_A 20 KGCFGQAIKVTHRE----TGEVMVMKELIRF-DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLN----------- 83 (310)
T ss_dssp CCSSEEEEEEEETT----TCCEEEEEEESCC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE-----------
T ss_pred CCCCEEEEEEEECC----CCcEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeE-----------
Confidence 35789999997632 2445555544222 2223344556777888889999999877755443333
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+|||++|++|.++++.....++..+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 84 -----lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 158 (310)
T 3s95_A 84 -----FITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLM 158 (310)
T ss_dssp -----EEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEEC
T ss_pred -----EEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceec
Confidence 389999999999999887777888899999999999999999999999999999999999999999999999875
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
..........
T Consensus 159 ~~~~~~~~~~---------------------------------------------------------------------- 168 (310)
T 3s95_A 159 VDEKTQPEGL---------------------------------------------------------------------- 168 (310)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred cccccccccc----------------------------------------------------------------------
Confidence 5211100000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcHHH-----
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA----- 534 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~~~----- 534 (1092)
..............+||+.|+|||++.+..++.++|||||||+||||+++......
T Consensus 169 -------------------~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~ 229 (310)
T 3s95_A 169 -------------------RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRT 229 (310)
T ss_dssp ------------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBC
T ss_pred -------------------ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhH
Confidence 00000001111256899999999999999999999999999999999975221110
Q ss_pred --HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 535 --LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 535 --~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
.............| ...++.+.+|+.+||+.||.+|||+.++++
T Consensus 230 ~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 230 MDFGLNVRGFLDRYCP---PNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp TTSSBCHHHHHHHTCC---TTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhhhhhccccccCC---CCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 00000001111122 334678999999999999999999999987
No 262
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.96 E-value=2.1e-30 Score=300.73 Aligned_cols=244 Identities=13% Similarity=0.115 Sum_probs=169.1
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|.||+|.....-. .+..++.|+..............++..++...+|||++.++.........+
T Consensus 55 ~G~fg~Vy~~~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~----------- 122 (373)
T 2qol_A 55 AGEFGEVCSGRLKLPSK-KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM----------- 122 (373)
T ss_dssp ECSSSEEEEC-CBCTTS-CBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE-----------
T ss_pred eCCCeEEEEEEEecCCC-CceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE-----------
Confidence 34789999998631111 134455555432222223344556777888889999998776644322222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
++|||++|++|.++|...+..++..+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 123 -----lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 123 -----IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp -----EEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred -----EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 389999999999999887777899899999999999999999999999999999999999999999999998765
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
......
T Consensus 198 ~~~~~~-------------------------------------------------------------------------- 203 (373)
T 2qol_A 198 EDDPEA-------------------------------------------------------------------------- 203 (373)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCcc--------------------------------------------------------------------------
Confidence 411000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~ 535 (1092)
........+|..|+|||.+.+..++.++|||||||+||||++ + |......
T Consensus 204 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~ 257 (373)
T 2qol_A 204 --------------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257 (373)
T ss_dssp ------------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH
T ss_pred --------------------------ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 000002345778999999999999999999999999999987 4 4332222
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
. ....+.....++.....++.+.+|+.+||++||.+||++.+|++
T Consensus 258 ~-~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 258 D-VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp H-HHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred H-HHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 2 22222222223334456788999999999999999999999987
No 263
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.96 E-value=1.8e-30 Score=290.78 Aligned_cols=253 Identities=15% Similarity=0.126 Sum_probs=176.1
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||+|...+.-.. ...++.|+..............++..++...+|||++.+++.......
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~-~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----- 100 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGK-KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG----- 100 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC------CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-----
T ss_pred hhhcceeeecCCceEEEEEEecCCCc-eeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC-----
Confidence 4443433 47899999975321100 112333333222222333445567778888899999987765321111
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
.. ..+|||++|++|.++++.....++..+++.++.||+.||.|||++||+||||||+||+++.++.+|++
T Consensus 101 ---~~-------~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~ 170 (298)
T 3f66_A 101 ---SP-------LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVA 170 (298)
T ss_dssp ---CC-------EEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEEC
T ss_pred ---ce-------EEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEEC
Confidence 11 13899999999999998777778888999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++........
T Consensus 171 Dfg~a~~~~~~~~~------------------------------------------------------------------ 184 (298)
T 3f66_A 171 DFGLARDMYDKEYY------------------------------------------------------------------ 184 (298)
T ss_dssp SCGGGCCCSCGGGC------------------------------------------------------------------
T ss_pred cccccccccccchh------------------------------------------------------------------
Confidence 99998765421100
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR--- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~--- 528 (1092)
.........||+.|+|||.+.+..++.++|||||||++|||+++
T Consensus 185 ---------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~ 231 (298)
T 3f66_A 185 ---------------------------------SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231 (298)
T ss_dssp ---------------------------------BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred ---------------------------------ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCC
Confidence 00011144678899999999999999999999999999999983
Q ss_pred -CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 -FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 -f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|.............. ...+......++.+.+|+.+||++||.+|||+.++++.
T Consensus 232 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 285 (298)
T 3f66_A 232 PYPDVNTFDITVYLLQ-GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 285 (298)
T ss_dssp SSTTSCTTTHHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCccCCHHHHHHHHhc-CCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 322222111111111 12222223457889999999999999999999999984
No 264
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.96 E-value=1.3e-30 Score=293.86 Aligned_cols=252 Identities=16% Similarity=0.131 Sum_probs=181.8
Q ss_pred hHHHhhhc--cccceeeeCCCCCcc-ccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAF-KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+.+.+ +|.|.||++.....- ...+..++.|+..............++..++...+|||++.++.....+...+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~- 102 (314)
T 2ivs_A 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLL- 102 (314)
T ss_dssp GEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE-
T ss_pred heeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceE-
Confidence 34444444 478999999642100 11134556666543333333344566777788889999998877654333222
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCC-----------------------CCCHHHHHHHHHHHHHHHHHhh
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-----------------------KGKRIECLYIFRQIVALVDYHH 346 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~-----------------------~~~~~~~~~i~~qil~~l~~lH 346 (1092)
.+|||++|++|.+++..... .++..+++.++.||+.||.|||
T Consensus 103 ---------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH 167 (314)
T 2ivs_A 103 ---------------LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA 167 (314)
T ss_dssp ---------------EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH
Confidence 38999999999999976532 3778899999999999999999
Q ss_pred hcCccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccc
Q 001366 347 TQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRW 426 (1092)
Q Consensus 347 s~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (1092)
++||+||||||+||+++.++.+||+|||+++.......
T Consensus 168 ~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------ 205 (314)
T 2ivs_A 168 EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS------------------------------------------ 205 (314)
T ss_dssp HTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSC------------------------------------------
T ss_pred HCCCcccccchheEEEcCCCCEEEcccccccccccccc------------------------------------------
Confidence 99999999999999999999999999999876441100
Q ss_pred cccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC
Q 001366 427 WSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG 506 (1092)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~ 506 (1092)
........+|+.|+|||.+.+
T Consensus 206 -----------------------------------------------------------~~~~~~~~~~~~y~aPE~~~~ 226 (314)
T 2ivs_A 206 -----------------------------------------------------------YVKRSQGRIPVKWMAIESLFD 226 (314)
T ss_dssp -----------------------------------------------------------EECSSCCCSCGGGCCHHHHHH
T ss_pred -----------------------------------------------------------ceeccCCCCcccccChhhhcC
Confidence 000013456788999999999
Q ss_pred CCCCccccchhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 507 GVCTTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 507 ~~~t~~sDIwSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
..++.++|||||||++|||++ + |..... ......+.....++.....++.+.+|+.+||++||.+||++.+++++
T Consensus 227 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP-ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG-GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 899999999999999999998 5 332211 11222233333334444567889999999999999999999999986
No 265
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.96 E-value=1.4e-30 Score=293.38 Aligned_cols=253 Identities=13% Similarity=0.098 Sum_probs=180.5
Q ss_pred hHHHhhhc--cccceeeeCCCCCc-cccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNA-FKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 288 (1092)
.|.+.+.+ +|.|.||++..... -...+..++.|+..............++...+... +|||++.++.........+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 103 (313)
T 1t46_A 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL 103 (313)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcE
Confidence 34444444 47899999963110 01124556666654333323334445566666666 8999998877654333222
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCC-----------------CCCHHHHHHHHHHHHHHHHHhhhcCcc
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-----------------KGKRIECLYIFRQIVALVDYHHTQGVT 351 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~-----------------~~~~~~~~~i~~qil~~l~~lHs~gIv 351 (1092)
++|||++|++|.+++..... .++..+++.++.||+.||.|||++||+
T Consensus 104 ----------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 167 (313)
T 1t46_A 104 ----------------VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI 167 (313)
T ss_dssp ----------------EEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ----------------EEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 38999999999999976543 378889999999999999999999999
Q ss_pred ccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCccccccccccc
Q 001366 352 FLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFP 431 (1092)
Q Consensus 352 HrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (1092)
||||||+||+++.++.+|++|||+++.......
T Consensus 168 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 200 (313)
T 1t46_A 168 HRDLAARNILLTHGRITKICDFGLARDIKNDSN----------------------------------------------- 200 (313)
T ss_dssp CSCCSGGGEEEETTTEEEECCCGGGSCTTSCTT-----------------------------------------------
T ss_pred cCCCccceEEEcCCCCEEEcccccccccccccc-----------------------------------------------
Confidence 999999999999999999999999876441100
Q ss_pred CccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCc
Q 001366 432 SKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTT 511 (1092)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~ 511 (1092)
........||+.|+|||.+.+..++.
T Consensus 201 ------------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~ 226 (313)
T 1t46_A 201 ------------------------------------------------------YVVKGNARLPVKWMAPESIFNCVYTF 226 (313)
T ss_dssp ------------------------------------------------------SEECSSSEECGGGCCHHHHHHCCCCH
T ss_pred ------------------------------------------------------ceeccCCCCcceeeChHHhcCCCCCh
Confidence 00011345788899999999999999
Q ss_pred cccchhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 512 SSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 512 ~sDIwSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
++|||||||+||||++ + |............+.....++.....++.+.+|+.+||++||.+|||+.+++++
T Consensus 227 ~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 301 (313)
T 1t46_A 227 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301 (313)
T ss_dssp HHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 9999999999999997 4 333221122222222222233334457889999999999999999999999985
No 266
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.96 E-value=3.9e-31 Score=293.06 Aligned_cols=258 Identities=16% Similarity=0.148 Sum_probs=185.9
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
...|.+.+.++ |.|.||++.... .+..++.|++..... ........++...+...+|||++.+++.......
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~- 79 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKS----DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN- 79 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETT----TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGG-
T ss_pred hhheeeehhccCCCCcEEEEEEECC----CCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCC-
Confidence 34555555544 789999997632 245555555533222 2233445566677888899999987764432111
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhhcC-----ccccCCCCCC
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR---GHKGKRIECLYIFRQIVALVDYHHTQG-----VTFLDLKPSS 359 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~---~~~~~~~~~~~i~~qil~~l~~lHs~g-----IvHrDLKP~N 359 (1092)
... .++|||++|++|.+++... ...++..+++.++.||+.||.|||++| |+||||||+|
T Consensus 80 ------~~~-------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~N 146 (279)
T 2w5a_A 80 ------TTL-------YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146 (279)
T ss_dssp ------TEE-------EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGG
T ss_pred ------ceE-------EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhh
Confidence 001 1389999999999999653 345888899999999999999999999 9999999999
Q ss_pred eEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccc
Q 001366 360 FKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIE 439 (1092)
Q Consensus 360 ill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (1092)
|+++.++.+||+|||+++......
T Consensus 147 Il~~~~~~~kl~dfg~~~~~~~~~-------------------------------------------------------- 170 (279)
T 2w5a_A 147 VFLDGKQNVKLGDFGLARILNHDT-------------------------------------------------------- 170 (279)
T ss_dssp EEECSSSCEEECCCCHHHHC---C--------------------------------------------------------
T ss_pred EEEcCCCCEEEecCchheeecccc--------------------------------------------------------
Confidence 999999999999999987643100
Q ss_pred ccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhh
Q 001366 440 TANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLG 519 (1092)
Q Consensus 440 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLG 519 (1092)
.......||+.|+|||++.+..++.++||||||
T Consensus 171 -----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 203 (279)
T 2w5a_A 171 -----------------------------------------------SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLG 203 (279)
T ss_dssp -----------------------------------------------HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHH
T ss_pred -----------------------------------------------ccccccCCCccccChHHhccCCCCchhhHHHHH
Confidence 001134689999999999999999999999999
Q ss_pred HHHHHHcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 520 VLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 520 vll~ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
|++|||+++ |...... .....+.....++.....++.+.+|+.+||+.||.+||++.|||+|+|+.+...
T Consensus 204 ~il~~l~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 276 (279)
T 2w5a_A 204 CLLYELCALMPPFTAFSQK-ELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHH 276 (279)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred HHHHHHHHCCCCCcccCHH-HHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence 999999985 4433222 222233333333333456788999999999999999999999999999987643
No 267
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=1.6e-28 Score=286.38 Aligned_cols=278 Identities=14% Similarity=0.154 Sum_probs=223.4
Q ss_pred eEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCC
Q 001366 750 AFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDR-DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR 828 (1092)
Q Consensus 750 ~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fsp-dg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~ 828 (1092)
++.||.+.+|++.+..... .....+.+|...|++++|+| ++++||+|+.|++|+||++.................+|.
T Consensus 53 ~~~~g~i~v~~~~~~~~~~-~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~ 131 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRVD-KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT 131 (402)
T ss_dssp CSSSCCEEEEETTCCEECC-TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS
T ss_pred EcCCCEEEEEECccCCCCC-CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC
Confidence 4678999999986532211 01224678999999999999 999999999999999999876321111112334556799
Q ss_pred CCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEe--eccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCce
Q 001366 829 SKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHY--IEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNS 906 (1092)
Q Consensus 829 ~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l--~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~ 906 (1092)
..|.+++|+|++..+|++++.||+|+|||+.+++.+..+ .+|...|.+++|+| ++..|++++.|+.|++||+++++.
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTV 210 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEE
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCCce
Confidence 999999999984479999999999999999999999999 78999999999999 889999999999999999999999
Q ss_pred eeeE-e-cCC-ceEEEEEccCCCeEEEEE---ECCCeEEEEEcCCCCcceEEe-cCCCCCeEEEEEc-CCCEEE-EEECC
Q 001366 907 LATI-K-NIA-NVCCVQFSAHSSHLLAFG---SADYRTYCYDLRNARAPWCVL-AGHEKAVSYVKFL-DSGTLV-TASTD 977 (1092)
Q Consensus 907 l~~l-~-~~~-~V~sl~fsp~~~~~latg---s~Dg~I~vwDlr~~~~~~~~l-~~H~~~V~~v~fs-~~~~L~-Sgs~D 977 (1092)
+..+ . +.. .+.++.|+|++ .+|++| +.|+.|++||+++...++... ..|...|.+++|+ ++.+|+ +|+.|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~d 289 (402)
T 2aq5_A 211 VAEKDRPHEGTRPVHAVFVSEG-KILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGD 289 (402)
T ss_dssp EEEEECSSCSSSCCEEEECSTT-EEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTC
T ss_pred eeeeccCCCCCcceEEEEcCCC-cEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCC
Confidence 9888 3 433 38999999998 588888 789999999999877644444 3678889999998 566775 55579
Q ss_pred CeEEEEEcCCCCCCCCCCCceeEEEcC--CCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCC
Q 001366 978 NKLKLWDLKRTSHTGPSTNACSLTFSG--HTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPM 1039 (1092)
Q Consensus 978 g~I~vWDl~~~~~~~~~~~~~~~~l~~--h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~ 1039 (1092)
+.|++||+.+.. .++..+.. |...|.+++|+|++.++++ .++.+++|++..+.
T Consensus 290 g~i~i~d~~~~~-------~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 290 SSIRYFEITSEA-------PFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERK 344 (402)
T ss_dssp SCEEEEEECSST-------TCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTE
T ss_pred CeEEEEEecCCC-------cceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCc
Confidence 999999998432 11333333 5689999999999988775 56699999987754
No 268
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.96 E-value=1.6e-30 Score=286.61 Aligned_cols=237 Identities=14% Similarity=0.070 Sum_probs=176.8
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+|.|.||++...+ +..++.|++..... ......++...+...+|||++.++.....+...+
T Consensus 19 G~~g~V~~~~~~~-----~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~------------ 79 (268)
T 3sxs_A 19 GQFGVVKLGKWKG-----QYDVAVKMIKEGSM--SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIY------------ 79 (268)
T ss_dssp ETTEEEEEEEETT-----TEEEEEEEECBTTB--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE------------
T ss_pred CCCceEEEEEecC-----ceeEEEEEeccCCC--cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceE------------
Confidence 4789999997643 33456655533222 2233456667778889999998776644322222
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
.+|||++|++|.+++...+..++..+++.++.||+.||.|||++||+||||||+||+++.++.+|++|||+++...
T Consensus 80 ----lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 155 (268)
T 3sxs_A 80 ----IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL 155 (268)
T ss_dssp ----EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECC
T ss_pred ----EEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecc
Confidence 3899999999999998876678888999999999999999999999999999999999999999999999987644
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
....
T Consensus 156 ~~~~---------------------------------------------------------------------------- 159 (268)
T 3sxs_A 156 DDQY---------------------------------------------------------------------------- 159 (268)
T ss_dssp TTCE----------------------------------------------------------------------------
T ss_pred hhhh----------------------------------------------------------------------------
Confidence 1000
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHHH
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERALA 536 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~~ 536 (1092)
.......+|+.|+|||.+.+..++.++|||||||++|||++ + |.......
T Consensus 160 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~ 213 (268)
T 3sxs_A 160 --------------------------VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE 213 (268)
T ss_dssp --------------------------EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred --------------------------hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH
Confidence 00013346778999999998899999999999999999998 4 43333332
Q ss_pred HHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 537 AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 537 ~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
....... ...+......++.+.+|+.+||++||.+|||+.+++++-
T Consensus 214 ~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L 259 (268)
T 3sxs_A 214 VVLKVSQ-GHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSI 259 (268)
T ss_dssp HHHHHHT-TCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHc-CCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 2222222 222222233578899999999999999999999999863
No 269
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.96 E-value=2.4e-30 Score=287.56 Aligned_cols=245 Identities=15% Similarity=0.113 Sum_probs=179.8
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
+|.+.+.++ |.|+||++...+ +..++.|++..... ......++...+...+|||++.++.....+...+
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~-- 95 (283)
T 3gen_A 25 DLTFLKELGTGQFGVVKYGKWRG-----QYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIF-- 95 (283)
T ss_dssp GEEEEEECC---CEEEEEEEETT-----TEEEEEEEECTTSB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE--
T ss_pred HHHhHhhcCCCCCceEEEEEEcC-----CCeEEEEEecCCCC--CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeE--
Confidence 344444444 789999997643 33455555533222 2233456667788889999998776644322222
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
.+|||++|++|.+++......++..+++.++.||+.||.|||++||+||||||+||+++.++.+||
T Consensus 96 --------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl 161 (283)
T 3gen_A 96 --------------IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 161 (283)
T ss_dssp --------------EEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEE
T ss_pred --------------EEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEE
Confidence 389999999999999875567888899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++.......
T Consensus 162 ~Dfg~~~~~~~~~~------------------------------------------------------------------ 175 (283)
T 3gen_A 162 SDFGLSRYVLDDEY------------------------------------------------------------------ 175 (283)
T ss_dssp CSTTGGGGBCCHHH------------------------------------------------------------------
T ss_pred cccccccccccccc------------------------------------------------------------------
Confidence 99999876441000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~- 528 (1092)
.......+|+.|+|||.+.+..++.++|||||||++|||++ +
T Consensus 176 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~ 219 (283)
T 3gen_A 176 ------------------------------------TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 219 (283)
T ss_dssp ------------------------------------HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTC
T ss_pred ------------------------------------ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 00013346788999999998899999999999999999997 4
Q ss_pred --CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
|........ ...+.....+......++.+.+|+.+||+.+|.+|||+.+++++-
T Consensus 220 ~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L 275 (283)
T 3gen_A 220 MPYERFTNSET-AEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 275 (283)
T ss_dssp CTTTTSCHHHH-HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred CCccccChhHH-HHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence 433222222 222222222223334478899999999999999999999999874
No 270
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.96 E-value=1.8e-30 Score=289.91 Aligned_cols=238 Identities=17% Similarity=0.146 Sum_probs=166.6
Q ss_pred ccccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.+|.|.||+|...+ .++.|++..... ........++..++...+|||++.++.....+ ..
T Consensus 34 ~G~~g~Vy~~~~~~-------~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~----------- 94 (289)
T 3og7_A 34 SGSFGTVYKGKWHG-------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP-QL----------- 94 (289)
T ss_dssp ECSSEEEEEEESSS-------EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-SC-----------
T ss_pred CCCCeEEEEEEEcC-------ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC-cc-----------
Confidence 35789999998733 345555432222 22334455677788889999999766532111 11
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
..+|+|++|++|.+++......++..+++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++.
T Consensus 95 -----~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 169 (289)
T 3og7_A 95 -----AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATE 169 (289)
T ss_dssp -----EEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC----
T ss_pred -----EEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccc
Confidence 138999999999999987777788889999999999999999999999999999999999999999999999875
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.....
T Consensus 170 ~~~~~--------------------------------------------------------------------------- 174 (289)
T 3og7_A 170 KSRWS--------------------------------------------------------------------------- 174 (289)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 43100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc---CCCCCccccchhhhHHHHHHcCC---CCcH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS---GGVCTTSSNIYSLGVLFFELFGR---FDSE 532 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~t~~sDIwSLGvll~ell~~---f~~~ 532 (1092)
.........||+.|+|||.+. +..++.++|||||||++|||+++ |...
T Consensus 175 --------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 228 (289)
T 3og7_A 175 --------------------------GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI 228 (289)
T ss_dssp -----------------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred --------------------------ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCcccc
Confidence 000112456899999999997 56789999999999999999985 4332
Q ss_pred HHHHHHHHhccccCCCC----CCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 533 RALAAAMSDLRDRILPP----SFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 533 ~~~~~~~~~~~~~~~p~----~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
.........+.....++ .....++.+.+|+.+||+++|.+|||+.++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 282 (289)
T 3og7_A 229 NNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAE 282 (289)
T ss_dssp CCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 22333333333222222 223556889999999999999999999999874
No 271
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.96 E-value=1.9e-30 Score=287.06 Aligned_cols=248 Identities=20% Similarity=0.224 Sum_probs=174.4
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
|.+.+.+ ++.|.||++... ..+..++.|++..... ........++...+...+|||++.++.........+
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~- 87 (276)
T 2h6d_A 13 YVLGDTLGVGTFGKVKIGEHQ----LTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFF- 87 (276)
T ss_dssp EEEEEEEEECSSEEEEEEEET----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE-
T ss_pred EEEEeeecCCCCeEEEEEEEC----CCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEE-
Confidence 4444444 368999999753 1245566665532211 111223345566677889999998877654333222
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
.+|||++|++|.+++...+ .++..+++.++.||+.||.|||++||+||||||+||+++.++.+|
T Consensus 88 ---------------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~ 151 (276)
T 2h6d_A 88 ---------------MVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK 151 (276)
T ss_dssp ---------------EEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEE
T ss_pred ---------------EEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEE
Confidence 3899999999999997764 477779999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
++|||+++......
T Consensus 152 l~dfg~~~~~~~~~------------------------------------------------------------------ 165 (276)
T 2h6d_A 152 IADFGLSNMMSDGE------------------------------------------------------------------ 165 (276)
T ss_dssp ECCCCGGGCCCC--------------------------------------------------------------------
T ss_pred EeecccccccCCCc------------------------------------------------------------------
Confidence 99999886643100
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC-CccccchhhhHHHHHHcCC
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-t~~sDIwSLGvll~ell~~ 528 (1092)
......||+.|+|||.+.+..+ +.++|||||||++|||+++
T Consensus 166 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g 207 (276)
T 2h6d_A 166 --------------------------------------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207 (276)
T ss_dssp -------------------------------------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHS
T ss_pred --------------------------------------ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhC
Confidence 0013468899999999988765 6899999999999999985
Q ss_pred ---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|...... .....+..... +.....++.+.+|+.+||++||.+|||+.++++||||...
T Consensus 208 ~~p~~~~~~~-~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~ 268 (276)
T 2h6d_A 208 TLPFDDEHVP-TLFKKIRGGVF-YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD 268 (276)
T ss_dssp SCSSCCSSHH-HHHHHHHHCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred CCCCCCCcHH-HHHHHhhcCcc-cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccC
Confidence 4433222 22222222211 1122347889999999999999999999999999999764
No 272
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.96 E-value=2.7e-30 Score=297.18 Aligned_cols=255 Identities=16% Similarity=0.214 Sum_probs=180.9
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+...+ +|.|.||++... ..+..++.|+...... ........++..++...+|||++.+++.........
T Consensus 26 y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-- 99 (353)
T 3coi_A 26 YVSPTHVGSGAYGSVCSAIDK----RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR-- 99 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEET----TTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG--
T ss_pred EEEeeeEecCCCeEEEEEEEC----CCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccc--
Confidence 4444444 478999999752 2255666666533222 222344556777788889999998776644322211
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
.. .....+|+|+. ++|.+++.. .++..+++.++.||+.||+|||++||+||||||+||+++.++.+||
T Consensus 100 ---~~-----~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl 167 (353)
T 3coi_A 100 ---NF-----YDFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKI 167 (353)
T ss_dssp ---GC-----CCCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEE
T ss_pred ---cc-----eeEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEE
Confidence 00 11124789998 599888753 4788899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++....
T Consensus 168 ~Dfg~~~~~~~--------------------------------------------------------------------- 178 (353)
T 3coi_A 168 LDFGLARHADA--------------------------------------------------------------------- 178 (353)
T ss_dssp CSTTCTTC------------------------------------------------------------------------
T ss_pred eecccccCCCC---------------------------------------------------------------------
Confidence 99998865320
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcCC-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~~- 528 (1092)
..+..+||++|+|||++.+ ..++.++|||||||+||||+++
T Consensus 179 -------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~ 221 (353)
T 3coi_A 179 -------------------------------------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221 (353)
T ss_dssp ------------------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSS
T ss_pred -------------------------------------CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCC
Confidence 0013468999999999987 6789999999999999999986
Q ss_pred --CCcHHHHHHHHHhcc-----------------------------ccCCCCCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001366 529 --FDSERALAAAMSDLR-----------------------------DRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~-----------------------------~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~ 577 (1092)
|.+............ ...++..+...++.+.+|+.+||++||.+|||+.
T Consensus 222 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~ 301 (353)
T 3coi_A 222 TLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAA 301 (353)
T ss_dssp CSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred CCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHH
Confidence 443322221111111 0111223345678899999999999999999999
Q ss_pred HHhhhhhhhhhhccc
Q 001366 578 EILQSEVTNEFQEVC 592 (1092)
Q Consensus 578 eiL~~~~~~~~~~~~ 592 (1092)
++|+||||.......
T Consensus 302 e~l~hp~f~~~~~~~ 316 (353)
T 3coi_A 302 QALTHPFFEPFRDPE 316 (353)
T ss_dssp HHHTSGGGTTTCCGG
T ss_pred HHhcCcchhhccCcc
Confidence 999999998765543
No 273
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.96 E-value=1.6e-30 Score=288.92 Aligned_cols=249 Identities=14% Similarity=0.052 Sum_probs=176.8
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+.+.+ +|.|.||+|...+.- ..+..++.|+..............++...+...+|||++.++.....+. .
T Consensus 13 ~y~~~~~lg~G~~g~Vy~~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~--- 87 (281)
T 3cc6_A 13 DVVLNRILGEGFFGEVYEGVYTNHK-GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-T--- 87 (281)
T ss_dssp GEEEEEEEEECSSSEEEEEEEECTT-CCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSS-C---
T ss_pred ceEEEEEEEecCCeeEEEeEEcCCC-CCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC-C---
Confidence 34444444 478999998742211 1123355555433322333344455666777779999998766532111 1
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
..+|+|++|++|.+++...+..++...++.++.||+.||+|||++||+||||||+||+++.++.+|+
T Consensus 88 -------------~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl 154 (281)
T 3cc6_A 88 -------------WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKL 154 (281)
T ss_dssp -------------EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEE
T ss_pred -------------EEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEe
Confidence 1389999999999999887777888899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++.......
T Consensus 155 ~Dfg~~~~~~~~~~------------------------------------------------------------------ 168 (281)
T 3cc6_A 155 GDFGLSRYIEDEDY------------------------------------------------------------------ 168 (281)
T ss_dssp CCCCGGGCC-----------------------------------------------------------------------
T ss_pred CccCCCcccccccc------------------------------------------------------------------
Confidence 99999876441000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~- 528 (1092)
.......+|+.|+|||++.+..++.++|||||||++|||++ +
T Consensus 169 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~ 212 (281)
T 3cc6_A 169 ------------------------------------YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 212 (281)
T ss_dssp ----------------------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred ------------------------------------cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCC
Confidence 00013346788999999998899999999999999999997 5
Q ss_pred --CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|...... .....+.....++.....++.+.+|+.+||++||.+||++.|++++
T Consensus 213 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 213 QPFFWLENK-DVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS 267 (281)
T ss_dssp CTTTTSCGG-GHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCcccCChH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 3211111 1111222222233334457889999999999999999999999985
No 274
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.96 E-value=2.6e-30 Score=289.38 Aligned_cols=251 Identities=14% Similarity=0.094 Sum_probs=183.0
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCc--------hhhHhhhhhhhhhccC-CCCCCCccccce
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--------SDAALKAAGAMMVASN-ASPKPVGVGTAV 281 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 281 (1092)
.|.+.+.++ +.|.||++.... .+..++.|++...... .......++..++... .|||++.+++..
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 18 NYEPKEILGRGVSSVVRRCIHKP----TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp TEEEEEEEEECSSEEEEEEEETT----TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred ccceeeeecCCCceEEEEEEEcC----cCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 466555554 679999997632 3455666665332211 1122234555556666 499999887765
Q ss_pred ecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeE
Q 001366 282 VSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFK 361 (1092)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nil 361 (1092)
..+...+ ++|||++|++|.+++.... .++..+++.++.||+.||+|||++||+||||||+||+
T Consensus 94 ~~~~~~~----------------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil 156 (298)
T 1phk_A 94 ETNTFFF----------------LVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENIL 156 (298)
T ss_dssp ECSSEEE----------------EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred ccCCeEE----------------EEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEE
Confidence 4333222 3899999999999997654 5778899999999999999999999999999999999
Q ss_pred EccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 362 LLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 362 l~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
++.++.+||+|||+++.....
T Consensus 157 ~~~~~~~kl~dfg~~~~~~~~----------------------------------------------------------- 177 (298)
T 1phk_A 157 LDDDMNIKLTDFGFSCQLDPG----------------------------------------------------------- 177 (298)
T ss_dssp ECTTCCEEECCCTTCEECCTT-----------------------------------------------------------
T ss_pred EcCCCcEEEecccchhhcCCC-----------------------------------------------------------
Confidence 999999999999988664310
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc------CCCCCccccc
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS------GGVCTTSSNI 515 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~------~~~~t~~sDI 515 (1092)
.......||+.|+|||++. ...++.++||
T Consensus 178 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di 212 (298)
T 1phk_A 178 ---------------------------------------------EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212 (298)
T ss_dssp ---------------------------------------------CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHH
T ss_pred ---------------------------------------------cccccccCCccccCHHHhccccccccccCCccccc
Confidence 0011356889999999985 4568999999
Q ss_pred hhhhHHHHHHcCC---CCcHHHHHHHHHhc--cccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 516 YSLGVLFFELFGR---FDSERALAAAMSDL--RDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 516 wSLGvll~ell~~---f~~~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|||||+||||+++ |............. .....++.+...++.+.+|+.+||+.||.+|||+.++|+||||.+.
T Consensus 213 ~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (298)
T 1phk_A 213 WSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 290 (298)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred HhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhc
Confidence 9999999999986 43332222222111 1222233444567889999999999999999999999999999864
No 275
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=6e-29 Score=292.36 Aligned_cols=257 Identities=16% Similarity=0.270 Sum_probs=199.4
Q ss_pred ecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCc-----------eEEEeeccC------------ccEEEEEEec
Q 001366 825 MSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ-----------TVSHYIEHE------------KRAWSVDFSQ 881 (1092)
Q Consensus 825 ~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~-----------~i~~l~~h~------------~~V~sv~fsp 881 (1092)
..+...|++++|+|+ +++||+|+.||.|+|||+.+++ ....+.+|. ..|++++|+|
T Consensus 25 ~~~~~~V~~v~~s~~-g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 25 VAEADIISTVEFNHS-GELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp CCGGGSEEEEEECSS-SSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred ccccCcEEEEEECCC-CCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 346789999999998 9999999999999999998876 578899998 8899999999
Q ss_pred CCC--CEEEEEeCCCcEEEEecCCCcee---------------------------------------eeE--ecCCceEE
Q 001366 882 VHP--TKLASGSDDCSVKLWNINEKNSL---------------------------------------ATI--KNIANVCC 918 (1092)
Q Consensus 882 ~~~--~~laSgs~Dg~I~iWDl~~~~~l---------------------------------------~~l--~~~~~V~s 918 (1092)
++ ..|++++.|++|++||+.++... ..+ .|...|.+
T Consensus 104 -~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 182 (447)
T 3dw8_B 104 -QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINS 182 (447)
T ss_dssp -CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCE
T ss_pred -CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEE
Confidence 65 78999999999999999864431 122 26778999
Q ss_pred EEEccCCCeEEEEEECCCeEEEEEcCCCCcceE-------EecCCCCCeEEEEEcC-C-CEEEEEECCCeEEEEEcCCCC
Q 001366 919 VQFSAHSSHLLAFGSADYRTYCYDLRNARAPWC-------VLAGHEKAVSYVKFLD-S-GTLVTASTDNKLKLWDLKRTS 989 (1092)
Q Consensus 919 l~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~-------~l~~H~~~V~~v~fs~-~-~~L~Sgs~Dg~I~vWDl~~~~ 989 (1092)
++|+|++. +|++| .|+.|++||+++....+. .+.+|...|.+++|++ + .+|++|+.||+|++||+++..
T Consensus 183 ~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 183 ISINSDYE-TYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp EEECTTSS-EEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred EEEcCCCC-EEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence 99999985 88888 899999999985443333 2568999999999994 4 689999999999999998543
Q ss_pred CCCCCCCceeEEEcCCCC------------CeEEEEEecCCCEEEEEecCCcEEEEeCCC-CCceeeeeccccCCCCCcc
Q 001366 990 HTGPSTNACSLTFSGHTN------------EKNFVGLSTADGYIACGSESNEVYAYHRSL-PMPITSYKFGSIDPISGKE 1056 (1092)
Q Consensus 990 ~~~~~~~~~~~~l~~h~~------------~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~-~~~i~~~~~~~~~~i~~~~ 1056 (1092)
. ....+..+.+|.. .|++++|+|+|.+|++++. +.|+|||+.. ++++..+... ........
T Consensus 261 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~-~~~~~~l~ 334 (447)
T 3dw8_B 261 L----CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVH-EYLRSKLC 334 (447)
T ss_dssp S----SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESC-GGGTTTHH
T ss_pred c----ccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecc-cccccccc
Confidence 1 1112567777776 8999999999999999999 9999999986 6666655421 00000000
Q ss_pred --ccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1057 --TDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1057 --~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.....-..+..++|+|++.+|++|+.||.|+||++
T Consensus 335 ~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~ 371 (447)
T 3dw8_B 335 SLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDR 371 (447)
T ss_dssp HHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEET
T ss_pred ccccccccccceEEEECCCCCEEEEeccCCEEEEEEc
Confidence 00000011345999999999999999999999996
No 276
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.6e-30 Score=301.65 Aligned_cols=248 Identities=15% Similarity=0.109 Sum_probs=168.7
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..+|.|.||+|...+.- .....++.|+..............++..++...+|||++.++....... +..
T Consensus 98 G~G~fg~Vy~~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--------~~~-- 166 (373)
T 3c1x_A 98 GRGHFGCVYHGTLLDND-GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE--------GSP-- 166 (373)
T ss_dssp ECCSSSEEEEEEEEETT-TEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCS--------SCC--
T ss_pred eeCCCeEEEEEEEECCC-CcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC--------CCe--
Confidence 34578999999752210 0012234444333223334445566777888889999998776533211 111
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.++|||++|++|.++|+..+..++..+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 167 -----~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 167 -----LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp -----EEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred -----EEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccc
Confidence 138999999999999988777788889999999999999999999999999999999999999999999999986
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+......
T Consensus 242 ~~~~~~~------------------------------------------------------------------------- 248 (373)
T 3c1x_A 242 MYDKEFD------------------------------------------------------------------------- 248 (373)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 5411000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~ 534 (1092)
.....+...+|+.|+|||.+.+..++.++|||||||+||||++ + |.....
T Consensus 249 --------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~ 302 (373)
T 3c1x_A 249 --------------------------SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 302 (373)
T ss_dssp -----------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS
T ss_pred --------------------------cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH
Confidence 0000113457888999999999999999999999999999998 3 322211
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
.... ..+.....++.....++.+.+|+.+||++||.+|||+.+++++
T Consensus 303 ~~~~-~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~ 349 (373)
T 3c1x_A 303 FDIT-VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 349 (373)
T ss_dssp SCHH-HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHH-HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1111 1111122222233457889999999999999999999999986
No 277
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.96 E-value=2e-30 Score=294.14 Aligned_cols=255 Identities=12% Similarity=0.042 Sum_probs=167.9
Q ss_pred cccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
+|.|.||++.....-.. ...++.|++.... .........++...+...+|||++.++.......... ....++
T Consensus 34 G~~g~Vy~~~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~---~~~~~~-- 107 (323)
T 3qup_A 34 GEFGSVREAQLKQEDGS-FVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG---RLPIPM-- 107 (323)
T ss_dssp ETTEEEEEEEC--------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----------CEE--
T ss_pred cCCeEEEEEEEcccCCc-ceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc---CCCccE--
Confidence 47899999986331100 1145555553322 2233445567777888889999998877655333221 011111
Q ss_pred ccCCCcccccCCCCCHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARG-----HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPI 374 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~-----~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg 374 (1092)
.+|+|++|++|.+++.... ..++..+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||
T Consensus 108 -----~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg 182 (323)
T 3qup_A 108 -----VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFG 182 (323)
T ss_dssp -----EEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCC
T ss_pred -----EEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeecc
Confidence 3799999999999995432 247888999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++........
T Consensus 183 ~a~~~~~~~~~--------------------------------------------------------------------- 193 (323)
T 3qup_A 183 LSRKIYSGDYY--------------------------------------------------------------------- 193 (323)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred ccccccccccc---------------------------------------------------------------------
Confidence 98764411000
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CC
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FD 530 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~ 530 (1092)
.......+|+.|+|||.+.+..++.++|||||||++|||++ + |.
T Consensus 194 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~ 241 (323)
T 3qup_A 194 --------------------------------RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYA 241 (323)
T ss_dssp ---------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred --------------------------------cccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 00013346778999999999999999999999999999998 5 33
Q ss_pred cHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCC-------HHHHhhhhhhhhh
Q 001366 531 SERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPT-------TREILQSEVTNEF 588 (1092)
Q Consensus 531 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rps-------a~eiL~~~~~~~~ 588 (1092)
...... ....+.....++.....++.+.+|+.+||++||.+||| .++++.|+|+...
T Consensus 242 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~ 305 (323)
T 3qup_A 242 GIENAE-IYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST 305 (323)
T ss_dssp TCCGGG-HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred ccChHH-HHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence 322211 22222222233344456788999999999999999999 6777888888654
No 278
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.96 E-value=1.5e-30 Score=291.11 Aligned_cols=254 Identities=16% Similarity=0.069 Sum_probs=178.5
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||++.....-...+..++.|+.... .........++..++...+|||++.++.........
T Consensus 12 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~---- 86 (295)
T 3ugc_A 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR---- 86 (295)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT----
T ss_pred hhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC----
Confidence 4444444 478999999732111223556666655322 122223445677778888999999876553221110
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
. ...+|||++|++|.+++......++..+++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus 87 ---~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~ 156 (295)
T 3ugc_A 87 ---N-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG 156 (295)
T ss_dssp ---S-------CEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEEC
T ss_pred ---c-------eEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEc
Confidence 0 113899999999999998776668888999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++........
T Consensus 157 Dfg~~~~~~~~~~~------------------------------------------------------------------ 170 (295)
T 3ugc_A 157 DFGLTKVLPQDKEF------------------------------------------------------------------ 170 (295)
T ss_dssp CCCSCC--------------------------------------------------------------------------
T ss_pred cCcccccccCCcce------------------------------------------------------------------
Confidence 99998765411000
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCC--
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRF-- 529 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f-- 529 (1092)
........+|..|+|||.+.+..++.++|||||||++|||+++.
T Consensus 171 ----------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~ 216 (295)
T 3ugc_A 171 ----------------------------------FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK 216 (295)
T ss_dssp ---------------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCT
T ss_pred ----------------------------------eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccc
Confidence 00001345678899999999999999999999999999999852
Q ss_pred -CcHHH---------------HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 530 -DSERA---------------LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 530 -~~~~~---------------~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
..... .......+.....++.....++.+.+|+.+||+.||.+|||+.|+++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~ 285 (295)
T 3ugc_A 217 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR 285 (295)
T ss_dssp TCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred cCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 22111 112222233333344445667889999999999999999999999873
No 279
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.96 E-value=8.1e-31 Score=292.10 Aligned_cols=243 Identities=13% Similarity=0.086 Sum_probs=174.5
Q ss_pred hHHHhhhc--cccceeeeCCCCCcc---ccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAF---KERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
.|.+.+.+ ++.|.||++.....- ......++.|+.... .........++..++...+|||++.++.....+...
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA-HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG-GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred HeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc-cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 34444444 478999999763200 000123445544221 122233445666778888999999877765433222
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~ 367 (1092)
+ .+|||++|++|.+++...+..++..+++.++.||+.||.|||++||+||||||+|||++.++.
T Consensus 88 ~----------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~ 151 (289)
T 4fvq_A 88 I----------------LVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREED 151 (289)
T ss_dssp E----------------EEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCB
T ss_pred E----------------EEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCc
Confidence 2 389999999999999887666888899999999999999999999999999999999998887
Q ss_pred --------EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccc
Q 001366 368 --------VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIE 439 (1092)
Q Consensus 368 --------vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (1092)
+|++|||+++.....
T Consensus 152 ~~~~~~~~~kl~Dfg~~~~~~~~--------------------------------------------------------- 174 (289)
T 4fvq_A 152 RKTGNPPFIKLSDPGISITVLPK--------------------------------------------------------- 174 (289)
T ss_dssp GGGTBCCEEEECCCCSCTTTSCH---------------------------------------------------------
T ss_pred ccccccceeeeccCcccccccCc---------------------------------------------------------
Confidence 999999987553210
Q ss_pred ccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhh
Q 001366 440 TANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSL 518 (1092)
Q Consensus 440 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSL 518 (1092)
....||+.|+|||.+.+ ..++.++|||||
T Consensus 175 --------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~Diwsl 204 (289)
T 4fvq_A 175 --------------------------------------------------DILQERIPWVPPECIENPKNLNLATDKWSF 204 (289)
T ss_dssp --------------------------------------------------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHH
T ss_pred --------------------------------------------------cccCCcCcccCHHHhCCCCCCCchhHHHHH
Confidence 02357888999999988 779999999999
Q ss_pred hHHHHHHcCC----CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 519 GVLFFELFGR----FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 519 Gvll~ell~~----f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
||++|||+++ |.................+|+ ..++.+.+|+.+||++||.+|||+.+++++
T Consensus 205 G~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 205 GTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPA---PKAAELANLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp HHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC---CSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHcCCCCCccccchHHHHHHhhccCCCCC---CCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 9999999984 222111111111111222222 236788999999999999999999999986
No 280
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.96 E-value=4.6e-30 Score=284.81 Aligned_cols=256 Identities=22% Similarity=0.203 Sum_probs=183.2
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ ++.|.||++.... .+..++.|+..... ....++...+...+|||++.++.......... .
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~--~ 81 (284)
T 2a19_B 13 FKEIELIGSGGFGQVFKAKHRI----DGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDP--E 81 (284)
T ss_dssp EEEEEEEECSSSCCEEEEEETT----TCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred cceeeeeccCCceEEEEEEEcC----CCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCc--c
Confidence 4444444 3689999997631 24455555543221 22345566677889999998755432100000 0
Q ss_pred cCCCCCcc--ccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 292 RTGVPASC--WIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 292 ~~~~~~~~--~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
........ ......+|||++|++|.+++... +..++..+++.++.||+.||.|||++||+||||||+||+++.++.+
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCE
Confidence 00000000 00022489999999999999653 3568888999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++......
T Consensus 162 kl~Dfg~~~~~~~~~----------------------------------------------------------------- 176 (284)
T 2a19_B 162 KIGDFGLVTSLKNDG----------------------------------------------------------------- 176 (284)
T ss_dssp EECCCTTCEESSCCS-----------------------------------------------------------------
T ss_pred EECcchhheeccccc-----------------------------------------------------------------
Confidence 999999887643100
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~ 528 (1092)
......||+.|+|||.+.+..++.++|||||||+||||+++
T Consensus 177 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~ 217 (284)
T 2a19_B 177 ---------------------------------------KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHV 217 (284)
T ss_dssp ---------------------------------------CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSC
T ss_pred ---------------------------------------cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhc
Confidence 00134689999999999999999999999999999999998
Q ss_pred CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 529 FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 529 f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
..+..........+....+++. .++.+.+|+.+||++||.+|||+.|++++.+.-.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 218 CDTAFETSKFFTDLRDGIISDI---FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp CSSHHHHHHHHHHHHTTCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred CCcchhHHHHHHHhhccccccc---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 6655554555555555444433 4688999999999999999999999999986643
No 281
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.96 E-value=4.1e-30 Score=291.57 Aligned_cols=258 Identities=16% Similarity=0.143 Sum_probs=177.8
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCch----hhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS----DAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
+|.+.+.++ |.|.||++.... ..+..++.|++....... .........+.+....|||++.+++.......
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 12 QYECVAEIGEGAYGKVFKARDLK---NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETT---TTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred ceeeeeeecccccEEEEEEEecC---CCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 355544444 789999997520 113445555543222111 11122222333444589999987765431110
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS 365 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~ 365 (1092)
.. ... ...+|||++ ++|.+++.... ..++..+++.++.||+.||.|||++||+||||||+||+++.+
T Consensus 89 ~~----~~~-------~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~ 156 (326)
T 1blx_A 89 DR----ETK-------LTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS 156 (326)
T ss_dssp SS----EEE-------EEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred CC----Cce-------EEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCC
Confidence 00 000 113799998 59999997653 347888999999999999999999999999999999999999
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+.+||+|||+++.....
T Consensus 157 ~~~kl~Dfg~~~~~~~~--------------------------------------------------------------- 173 (326)
T 1blx_A 157 GQIKLADFGLARIYSFQ--------------------------------------------------------------- 173 (326)
T ss_dssp CCEEECSCCSCCCCCGG---------------------------------------------------------------
T ss_pred CCEEEecCcccccccCC---------------------------------------------------------------
Confidence 99999999988653310
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL 525 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~el 525 (1092)
.......||+.|+|||++.+..++.++|||||||+||||
T Consensus 174 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 212 (326)
T 1blx_A 174 -----------------------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212 (326)
T ss_dssp -----------------------------------------GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred -----------------------------------------CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHH
Confidence 001145689999999999999999999999999999999
Q ss_pred cCC---CCcHHHHHHHHHhccccCC-------------------------CCCCCCCChhHHHHHHhccccCCCCCCCHH
Q 001366 526 FGR---FDSERALAAAMSDLRDRIL-------------------------PPSFLSENPKEAGFCLWQLHPEPLSRPTTR 577 (1092)
Q Consensus 526 l~~---f~~~~~~~~~~~~~~~~~~-------------------------p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~ 577 (1092)
+++ |.+..........+..... .......++.+.+|+.+||++||.+|||+.
T Consensus 213 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 292 (326)
T 1blx_A 213 FRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY 292 (326)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred HcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHH
Confidence 985 5443333322222111000 011234567788999999999999999999
Q ss_pred HHhhhhhhhhhh
Q 001366 578 EILQSEVTNEFQ 589 (1092)
Q Consensus 578 eiL~~~~~~~~~ 589 (1092)
|+|+||||....
T Consensus 293 e~l~hp~~~~~~ 304 (326)
T 1blx_A 293 SALSHPYFQDLE 304 (326)
T ss_dssp HHHTSGGGTTCC
T ss_pred HHhcCccccccc
Confidence 999999998754
No 282
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=1.8e-28 Score=283.31 Aligned_cols=270 Identities=13% Similarity=0.095 Sum_probs=205.0
Q ss_pred CCeEEEEEcccceE-----EeeEEeeeecCCCCCEEEEEEcCCCCEEEEEe-----------CCCcEEEEEcCCCCCCC-
Q 001366 753 DGLCKYARYSKFEV-----QGMLRTGEFNNSANVICSISFDRDEDHFAAAG-----------VSKKIKIFEFNALFNDS- 815 (1092)
Q Consensus 753 D~~~k~w~~~~~~~-----~~~l~~~~l~~h~~~V~sl~fspdg~~latgg-----------~D~~I~Iwd~~~~~~~~- 815 (1092)
++.+++|++..... ........|..|...|.+++++ ++.+++|+ .|+++++|++.......
T Consensus 42 ~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~ 119 (365)
T 4h5i_A 42 PNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLE 119 (365)
T ss_dssp CEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEE
T ss_pred CCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEE
Confidence 44699998753221 1112223577899999888765 55666654 57789999986522100
Q ss_pred -cccccceeeecCCCCeEEEEEecCCCCEEEE--EECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeC
Q 001366 816 -VDVYYPAVEMSNRSKLSCVCWNNYIKNYLAS--ADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSD 892 (1092)
Q Consensus 816 -~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaS--gs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~ 892 (1092)
...........+...+.+++|+|+ +++|++ ++.|++|+|||+.+++++..+. |...|++|+|+| ++.++++++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~v~fSpD-g~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fsp-dg~~l~s~s~ 196 (365)
T 4h5i_A 120 FLTSVDFDASTNADDYTKLVYISRE-GTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFST-DGKVVAYITG 196 (365)
T ss_dssp EEEEECSSCCCCTTCCEEEEEECTT-SSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECT-TSSEEEEECS
T ss_pred EeeeeceeecCCcccCEEEEEEcCC-CCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEcc-CCceEEeccc
Confidence 000001111234566899999998 777654 4579999999999999988886 788899999999 8999999985
Q ss_pred CCcEEEEecCCCceeeeEe---cCCceEEEEEccCCCeEEEEEECCC----eEEEEEcCCCCcc---eEEecCCCCCeEE
Q 001366 893 DCSVKLWNINEKNSLATIK---NIANVCCVQFSAHSSHLLAFGSADY----RTYCYDLRNARAP---WCVLAGHEKAVSY 962 (1092)
Q Consensus 893 Dg~I~iWDl~~~~~l~~l~---~~~~V~sl~fsp~~~~~latgs~Dg----~I~vwDlr~~~~~---~~~l~~H~~~V~~ 962 (1092)
| .+++|+..++..+.... +...|.+++|+|++. ++++++.|+ .+++||+...... ...+.+|...|++
T Consensus 197 ~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~ 274 (365)
T 4h5i_A 197 S-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT-VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITS 274 (365)
T ss_dssp S-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE-EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEE
T ss_pred e-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC-EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEe
Confidence 5 56777777777654332 566799999999995 888888777 6889998865432 3456789999999
Q ss_pred EEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEE-cCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCC
Q 001366 963 VKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTF-SGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSL 1037 (1092)
Q Consensus 963 v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l-~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~ 1037 (1092)
++|+ ++.+|++|+.|++|+|||+. ++.++.++ .+|...|++|+|||||++||+||.|++|+||++..
T Consensus 275 ~~~Spdg~~lasgs~D~~V~iwd~~--------~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 275 MDVDMKGELAVLASNDNSIALVKLK--------DLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEECTTSCEEEEEETTSCEEEEETT--------TTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEECCCCCceEEEcCCCEEEEEECC--------CCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 9999 67789999999999999998 45677775 68999999999999999999999999999999854
No 283
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.96 E-value=2.8e-30 Score=293.67 Aligned_cols=257 Identities=13% Similarity=0.073 Sum_probs=183.1
Q ss_pred hHHHhhhc--cccceeeeCCCCCc-cccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNA-FKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
.|.+...+ +|.|.||+|...+. -...+..++.|++.............++..++...+|||++.++.....+...+
T Consensus 31 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~- 109 (327)
T 2yfx_A 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF- 109 (327)
T ss_dssp GCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE-
T ss_pred heEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE-
Confidence 34444444 37899999985321 112245566666643333334444556677788889999998776644332222
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcC------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARG------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL 363 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~ 363 (1092)
++|||++|++|.++|.... ..++..+++.++.||+.||.|||++||+||||||+|||++
T Consensus 110 ---------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~ 174 (327)
T 2yfx_A 110 ---------------ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 174 (327)
T ss_dssp ---------------EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEES
T ss_pred ---------------EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEe
Confidence 3899999999999997654 3477788999999999999999999999999999999998
Q ss_pred c---CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccc
Q 001366 364 Q---SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIET 440 (1092)
Q Consensus 364 ~---~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1092)
. ...+||+|||+++.......
T Consensus 175 ~~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------------------- 198 (327)
T 2yfx_A 175 CPGPGRVAKIGDFGMARDIYRASY-------------------------------------------------------- 198 (327)
T ss_dssp CSSTTCCEEECCCHHHHHHHC-----------------------------------------------------------
T ss_pred cCCCcceEEECccccccccccccc--------------------------------------------------------
Confidence 4 44699999999876431100
Q ss_pred cCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhH
Q 001366 441 ANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGV 520 (1092)
Q Consensus 441 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGv 520 (1092)
........||+.|+|||++.+..++.++|||||||
T Consensus 199 ---------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 233 (327)
T 2yfx_A 199 ---------------------------------------------YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 233 (327)
T ss_dssp ------------------------------------------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred ---------------------------------------------cccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHH
Confidence 00001346788999999999999999999999999
Q ss_pred HHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 521 LFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 521 ll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
+||||++ + |...... ..+..+.....++.....++.+.+|+.+||++||.+||++.+|+++.++..
T Consensus 234 il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 234 LLWEIFSLGYMPYPSKSNQ-EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HHHHHHTTSCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCCcCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 9999997 4 4332222 222222222233333456788999999999999999999999999987654
No 284
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.96 E-value=6.9e-31 Score=300.94 Aligned_cols=249 Identities=13% Similarity=0.141 Sum_probs=182.7
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchh----------------hHhhhhhhhhhccCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSD----------------AALKAAGAMMVASNASPKP 274 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~ 274 (1092)
.|.+...++ +.|.||++.. + +..++.|++........ .....++...+...+|||+
T Consensus 32 ~y~~~~~lg~G~~g~V~~~~~-~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 105 (348)
T 2pml_X 32 DYRIIRTLNQGKFNKIILCEK-D-----NKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC 105 (348)
T ss_dssp TEEEEEEEECCSSCCEEEEEE-T-----TEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred ceEEEEEEcCCCCeEEEEEEc-C-----CceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence 455555554 6799999987 3 45555555432211110 1444566677888899999
Q ss_pred CccccceecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHH------Hhhc-CCCCCHHHHHHHHHHHHHHHHHhhh
Q 001366 275 VGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREW------LNAR-GHKGKRIECLYIFRQIVALVDYHHT 347 (1092)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~------l~~~-~~~~~~~~~~~i~~qil~~l~~lHs 347 (1092)
+.++.....+...+ ++|||++|++|.++ +... ...++..+++.++.||+.||.|||+
T Consensus 106 ~~~~~~~~~~~~~~----------------lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 169 (348)
T 2pml_X 106 LTCEGIITNYDEVY----------------IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN 169 (348)
T ss_dssp CCCSEEEESSSEEE----------------EEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeeCCeEE----------------EEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc
Confidence 98877655433222 38999999999999 6542 4568888999999999999999999
Q ss_pred -cCccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccc
Q 001366 348 -QGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRW 426 (1092)
Q Consensus 348 -~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (1092)
+||+||||||+||+++.++.+||+|||+++.....
T Consensus 170 ~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-------------------------------------------- 205 (348)
T 2pml_X 170 EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK-------------------------------------------- 205 (348)
T ss_dssp TSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT--------------------------------------------
T ss_pred cCCEeecCCChHhEEEcCCCcEEEeccccccccccc--------------------------------------------
Confidence 99999999999999999999999999988764310
Q ss_pred cccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC
Q 001366 427 WSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG 506 (1092)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~ 506 (1092)
......||+.|+|||.+.+
T Consensus 206 -------------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 224 (348)
T 2pml_X 206 -------------------------------------------------------------KIKGSRGTYEFMPPEFFSN 224 (348)
T ss_dssp -------------------------------------------------------------EECSSCSCGGGCCGGGGSS
T ss_pred -------------------------------------------------------------cccCCCCCcCccCchhhcC
Confidence 0114568999999999988
Q ss_pred C-CCCc-cccchhhhHHHHHHcCC---CCcHHHHHHHHHhccccC--CCCC----------------CCCCChhHHHHHH
Q 001366 507 G-VCTT-SSNIYSLGVLFFELFGR---FDSERALAAAMSDLRDRI--LPPS----------------FLSENPKEAGFCL 563 (1092)
Q Consensus 507 ~-~~t~-~sDIwSLGvll~ell~~---f~~~~~~~~~~~~~~~~~--~p~~----------------~~~~~~~~~~li~ 563 (1092)
. .++. ++|||||||++|||+++ |.........+..+.... +|.. ....++.+.+|+.
T Consensus 225 ~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 304 (348)
T 2pml_X 225 ESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLK 304 (348)
T ss_dssp CCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHH
T ss_pred CCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHH
Confidence 7 6766 99999999999999985 443322122222222221 1210 1446788999999
Q ss_pred hccccCCCCCCCHHHHhhhhhhhhh
Q 001366 564 WQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 564 ~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
+||++||.+|||+.|+|+||||...
T Consensus 305 ~~L~~dP~~Rps~~e~l~hp~f~~~ 329 (348)
T 2pml_X 305 LFLRKNPAERITSEDALKHEWLADT 329 (348)
T ss_dssp HHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HHccCChhhCCCHHHHhcCccccCC
Confidence 9999999999999999999999874
No 285
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=2.5e-30 Score=288.32 Aligned_cols=245 Identities=14% Similarity=0.060 Sum_probs=180.6
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..+|.|.||+|...+ ...+..++.|+..............++...+...+|||++.++.....+. .+
T Consensus 19 g~G~~g~Vy~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~---------- 85 (287)
T 1u59_A 19 GCGNFGSVRQGVYRM--RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LM---------- 85 (287)
T ss_dssp ECCTTEEEEEEEEC-----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSS-EE----------
T ss_pred cccCceeEEEeEecc--CCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCC-cE----------
Confidence 345789999996421 11234456666544333334445556777788889999998776642111 11
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+|||++|++|.+++......++..+++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++.
T Consensus 86 ------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 86 ------LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp ------EEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred ------EEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceee
Confidence 38999999999999987766788989999999999999999999999999999999999999999999999876
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.......
T Consensus 160 ~~~~~~~------------------------------------------------------------------------- 166 (287)
T 1u59_A 160 LGADDSY------------------------------------------------------------------------- 166 (287)
T ss_dssp CTTCSCE-------------------------------------------------------------------------
T ss_pred eccCcce-------------------------------------------------------------------------
Confidence 5411000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~ 534 (1092)
........||+.|+|||++.+..++.++|||||||++|||++ + |.....
T Consensus 167 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 219 (287)
T 1u59_A 167 ---------------------------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG 219 (287)
T ss_dssp ---------------------------ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT
T ss_pred ---------------------------eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH
Confidence 000013456888999999998889999999999999999997 5 332221
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
...+..+.....++.....++.+.+|+.+||.++|.+||++.+++++.
T Consensus 220 -~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l 267 (287)
T 1u59_A 220 -PEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM 267 (287)
T ss_dssp -HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred -HHHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 122223333333334445688999999999999999999999999975
No 286
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.96 E-value=2.9e-30 Score=293.46 Aligned_cols=252 Identities=15% Similarity=0.118 Sum_probs=164.2
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhh-hhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAM-MVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
+|.+.+.+ +|.|.||++... ..+..++.|++..............+.. ++....|||++.++.....+...+
T Consensus 23 ~y~~~~~lg~G~~g~Vy~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~- 97 (327)
T 3aln_A 23 DLKDLGEIGRGAYGSVNKMVHK----PSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCW- 97 (327)
T ss_dssp SEEC-CEEEECSSEEEEEEEET----TTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEE-
T ss_pred HhhehheeccCCCEEEEEEEEc----CCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceE-
Confidence 44455444 478999999863 2255666666543322222333333333 677789999998877655333222
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHhhhc-CccccCCCCCCeEEcc
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNA----RGHKGKRIECLYIFRQIVALVDYHHTQ-GVTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~----~~~~~~~~~~~~i~~qil~~l~~lHs~-gIvHrDLKP~Nill~~ 364 (1092)
++|||++| +|.+++.. ....++...+..++.||+.||.|||++ ||+||||||+||+++.
T Consensus 98 ---------------lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~ 161 (327)
T 3aln_A 98 ---------------ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDR 161 (327)
T ss_dssp ---------------EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEET
T ss_pred ---------------EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcC
Confidence 37999986 88888853 245678889999999999999999999 9999999999999999
Q ss_pred CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 365 ~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
++.+||+|||+++......
T Consensus 162 ~~~~kl~Dfg~~~~~~~~~------------------------------------------------------------- 180 (327)
T 3aln_A 162 SGNIKLCDFGISGQLVDSI------------------------------------------------------------- 180 (327)
T ss_dssp TTEEEECCCSSSCC------------------------------------------------------------------
T ss_pred CCCEEEccCCCceeccccc-------------------------------------------------------------
Confidence 9999999999887643100
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccc----cCCCCCccccchhhhH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL----SGGVCTTSSNIYSLGV 520 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l----~~~~~t~~sDIwSLGv 520 (1092)
......||+.|+|||.+ .+..++.++|||||||
T Consensus 181 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~ 217 (327)
T 3aln_A 181 -------------------------------------------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGI 217 (327)
T ss_dssp --------------------------------------------------------------------CCSHHHHHHHHH
T ss_pred -------------------------------------------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHH
Confidence 00133689999999999 4567899999999999
Q ss_pred HHHHHcCC---CCcHHHHHHHHHhccccCCC----CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 521 LFFELFGR---FDSERALAAAMSDLRDRILP----PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 521 ll~ell~~---f~~~~~~~~~~~~~~~~~~p----~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
+||||+++ |.........+..+.....+ ......++.+.+|+.+||+.||.+|||+.+|++||||....
T Consensus 218 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 293 (327)
T 3aln_A 218 TLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYE 293 (327)
T ss_dssp HHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred HHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhH
Confidence 99999986 44433322333222222211 11234678899999999999999999999999999998653
No 287
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.96 E-value=3e-30 Score=292.36 Aligned_cols=251 Identities=16% Similarity=0.109 Sum_probs=182.0
Q ss_pred HHHhhhc--cccceeeeCCCCCccc-cccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFK-ERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.+ +|.|.||+|...+... ..+..++.|++.............++..++...+|||++.++.....+...+
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~-- 104 (322)
T 1p4o_A 27 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL-- 104 (322)
T ss_dssp EEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE--
T ss_pred eeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccE--
Confidence 4444444 4789999987532100 1234556665543333333334556777888889999998776644322222
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcC---------CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFK 361 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nil 361 (1092)
++|||++|++|.+++...+ ..++..+++.++.||+.||.|||++||+||||||+||+
T Consensus 105 --------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIl 170 (322)
T 1p4o_A 105 --------------VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM 170 (322)
T ss_dssp --------------EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEE
T ss_pred --------------EEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEE
Confidence 3899999999999996532 34677899999999999999999999999999999999
Q ss_pred EccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 362 LLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 362 l~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
++.++.+||+|||+++.......
T Consensus 171 i~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------------------- 193 (322)
T 1p4o_A 171 VAEDFTVKIGDFGMTRDIYETDY--------------------------------------------------------- 193 (322)
T ss_dssp ECTTCCEEECCTTCCCGGGGGGC---------------------------------------------------------
T ss_pred EcCCCeEEECcCccccccccccc---------------------------------------------------------
Confidence 99999999999999876441100
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHH
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVL 521 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvl 521 (1092)
........||+.|+|||.+.+..++.++|||||||+
T Consensus 194 --------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 229 (322)
T 1p4o_A 194 --------------------------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 229 (322)
T ss_dssp --------------------------------------------EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCCCCCccChhhhccCCCCchhhHHHHHHH
Confidence 000113467889999999999899999999999999
Q ss_pred HHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 522 FFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 522 l~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
||||++ + |..... ......+.....++.....++.+.+|+.+||++||.+|||+.|++++
T Consensus 230 l~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 230 LWEIATLAEQPYQGLSN-EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp HHHHHHTSCCTTTTSCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhcCCCccccCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999997 4 333222 22233333333444445667889999999999999999999999997
No 288
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.96 E-value=9.5e-31 Score=296.86 Aligned_cols=249 Identities=19% Similarity=0.202 Sum_probs=177.6
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC-------chhhHhhhhhhhhhccCCCCCCCccccceec
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-------PSDAALKAAGAMMVASNASPKPVGVGTAVVS 283 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (1092)
.|.+.+.++ |.|.||++.... .+..++.|++..... ........++..++...+|||++.++.....
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 86 (322)
T 2ycf_A 11 EYIMSKTLGSGACGEVKLAFERK----TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 86 (322)
T ss_dssp HEEEEEEEEECSSEEEEEEEETT----TTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred ceeEeeEEecCCCEEEEEEEEcC----CCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence 344444443 789999997532 245566665532211 1111223456667788899999987665332
Q ss_pred CCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc
Q 001366 284 NGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL 363 (1092)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~ 363 (1092)
+. . ..+|||++|++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+|||++
T Consensus 87 ~~-~----------------~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~ 148 (322)
T 2ycf_A 87 ED-Y----------------YIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 148 (322)
T ss_dssp SS-E----------------EEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEES
T ss_pred Cc-e----------------EEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe
Confidence 11 1 13899999999999997654 577889999999999999999999999999999999998
Q ss_pred cCCc---EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccc
Q 001366 364 QSNQ---VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIET 440 (1092)
Q Consensus 364 ~~~~---vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1092)
.++. +||+|||+++.....
T Consensus 149 ~~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------------------- 170 (322)
T 2ycf_A 149 SQEEDCLIKITDFGHSKILGET---------------------------------------------------------- 170 (322)
T ss_dssp SSSSSCCEEECCCTTCEECCCC----------------------------------------------------------
T ss_pred cCCCCCeEEEccCccceecccc----------------------------------------------------------
Confidence 7665 999999998764310
Q ss_pred cCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc---CCCCCccccchh
Q 001366 441 ANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS---GGVCTTSSNIYS 517 (1092)
Q Consensus 441 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~t~~sDIwS 517 (1092)
.......||+.|+|||++. ...++.++||||
T Consensus 171 ----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~s 204 (322)
T 2ycf_A 171 ----------------------------------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWS 204 (322)
T ss_dssp ----------------------------------------------HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHH
T ss_pred ----------------------------------------------cccccccCCcCccCchhhccCCCCCCCchhhHHH
Confidence 0011456899999999974 467899999999
Q ss_pred hhHHHHHHcCC---CCcHHH---HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhh
Q 001366 518 LGVLFFELFGR---FDSERA---LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587 (1092)
Q Consensus 518 LGvll~ell~~---f~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~ 587 (1092)
|||+||||+++ |..... ....+........|..+...++.+.+|+.+||++||.+||++.++|+||||..
T Consensus 205 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~ 280 (322)
T 2ycf_A 205 LGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280 (322)
T ss_dssp HHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred HHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence 99999999986 332211 11222222222222233456788999999999999999999999999999975
No 289
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.96 E-value=1.4e-30 Score=303.02 Aligned_cols=247 Identities=14% Similarity=0.117 Sum_probs=167.9
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC-CCCC-----CCccccceecC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPK-----PVGVGTAVVSN 284 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~ 284 (1092)
.|.+.+.++ |.|.||++... ..+..++.|+.... ........++..++... .+++ ++.+.......
T Consensus 55 ~y~~~~~lG~G~~g~V~~~~~~----~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 55 RYEIDSLIGKGSFGQVVKAYDR----VEQEWVAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp TEEEEEEEEEETTEEEEEEEET----TTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eEEEEEEEeecCCEEEEEEEEc----CCCcEEEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 355554444 78999999752 22455666665321 11122222333333333 2343 44444433322
Q ss_pred CCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhh--hcCccccCCCCCCeE
Q 001366 285 GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHH--TQGVTFLDLKPSSFK 361 (1092)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lH--s~gIvHrDLKP~Nil 361 (1092)
...+ ++|||+.| +|.+++.... ..++...++.++.||+.||.||| .+||+||||||+|||
T Consensus 129 ~~~~----------------lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIl 191 (382)
T 2vx3_A 129 NHLC----------------LVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENIL 191 (382)
T ss_dssp TEEE----------------EEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEE
T ss_pred CceE----------------EEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEE
Confidence 2222 37999975 9999997654 45788899999999999999999 579999999999999
Q ss_pred Ec--cCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccc
Q 001366 362 LL--QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIE 439 (1092)
Q Consensus 362 l~--~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (1092)
|+ ..+.+||+|||+++....
T Consensus 192 l~~~~~~~~kL~DFG~a~~~~~---------------------------------------------------------- 213 (382)
T 2vx3_A 192 LCNPKRSAIKIVDFGSSCQLGQ---------------------------------------------------------- 213 (382)
T ss_dssp ESSTTSCCEEECCCTTCEETTC----------------------------------------------------------
T ss_pred EecCCCCcEEEEeccCceeccc----------------------------------------------------------
Confidence 95 478899999999876431
Q ss_pred ccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhh
Q 001366 440 TANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLG 519 (1092)
Q Consensus 440 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLG 519 (1092)
.....+||++|+|||++.+..++.++||||||
T Consensus 214 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG 245 (382)
T 2vx3_A 214 ------------------------------------------------RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLG 245 (382)
T ss_dssp ------------------------------------------------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------ccccccCCccccChHHHcCCCCCcHHHHHHHH
Confidence 01145789999999999999999999999999
Q ss_pred HHHHHHcCC---CCcHHHHHHHHHhccccCCCC-------------------------------------CCC-------
Q 001366 520 VLFFELFGR---FDSERALAAAMSDLRDRILPP-------------------------------------SFL------- 552 (1092)
Q Consensus 520 vll~ell~~---f~~~~~~~~~~~~~~~~~~p~-------------------------------------~~~------- 552 (1092)
|+||||+++ |.+................|+ ...
T Consensus 246 ~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 325 (382)
T 2vx3_A 246 CILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILG 325 (382)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHT
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhh
Confidence 999999986 554433332222211100000 000
Q ss_pred ------------------CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 553 ------------------SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 553 ------------------~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
...+.+.+||.+||++||.+|||+.|+|+||||.+.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 326 VETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp TTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred ccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence 001367899999999999999999999999999864
No 290
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.96 E-value=2e-30 Score=292.65 Aligned_cols=255 Identities=15% Similarity=0.123 Sum_probs=179.9
Q ss_pred hHHHhhhcc--ccceeeeCCCCCc-cccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNA-FKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 288 (1092)
.|.+.+.++ |.|.||++..... -...+..++.|+..............++...+... .|||++.++.........
T Consensus 28 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~- 106 (316)
T 2xir_A 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP- 106 (316)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC-
T ss_pred heeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCc-
Confidence 344544444 7899999963110 01124556666654333333333444555555555 789999877664322110
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCC---------------CCHHHHHHHHHHHHHHHHHhhhcCcccc
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHK---------------GKRIECLYIFRQIVALVDYHHTQGVTFL 353 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~---------------~~~~~~~~i~~qil~~l~~lHs~gIvHr 353 (1092)
..++|||++|++|.+++...... ++..+++.++.||+.||.|||++||+||
T Consensus 107 --------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~ 172 (316)
T 2xir_A 107 --------------LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR 172 (316)
T ss_dssp --------------CEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred --------------eEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 11379999999999999765432 7788999999999999999999999999
Q ss_pred CCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCc
Q 001366 354 DLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSK 433 (1092)
Q Consensus 354 DLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (1092)
||||+||+++.++.+||+|||+++.......
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------- 203 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPD------------------------------------------------- 203 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTT-------------------------------------------------
T ss_pred cCccceEEECCCCCEEECCCccccccccCcc-------------------------------------------------
Confidence 9999999999999999999999876431000
Q ss_pred cCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccc
Q 001366 434 YGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSS 513 (1092)
Q Consensus 434 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~s 513 (1092)
........||+.|+|||++.+..++.++
T Consensus 204 ----------------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~ 231 (316)
T 2xir_A 204 ----------------------------------------------------YVRKGDARLPLKWMAPETIFDRVYTIQS 231 (316)
T ss_dssp ----------------------------------------------------SEEETTEEECGGGCCHHHHHHCCCCHHH
T ss_pred ----------------------------------------------------ceeccCCCcceeecCchhhccccccchh
Confidence 0001145678899999999999999999
Q ss_pred cchhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 514 NIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 514 DIwSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
|||||||++|||++ + |............+.....++.....++.+.+|+.+||++||.+|||+.++++|.
T Consensus 232 Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 305 (316)
T 2xir_A 232 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305 (316)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 99999999999997 5 4332212222223333233333344678999999999999999999999999873
No 291
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.96 E-value=8.5e-31 Score=305.23 Aligned_cols=297 Identities=18% Similarity=0.116 Sum_probs=163.7
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCC--------CCCCCccccceec
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNA--------SPKPVGVGTAVVS 283 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 283 (1092)
|.+.+.++ |.|+||++... ..+..++.|+.... ........++..++...+ |||++.+++....
T Consensus 39 y~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 39 YHVIRKLGWGHFSTVWLSWDI----QGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp EEEEEEEEECSSEEEEEEEET----TTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred EEEEEEeeecCCeeEEEEEec----CCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 55554444 78999999642 12455666665321 111222333444444332 6777776665432
Q ss_pred CCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhhc-CccccCCCCCCeE
Q 001366 284 NGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQ-GVTFLDLKPSSFK 361 (1092)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~qil~~l~~lHs~-gIvHrDLKP~Nil 361 (1092)
..... .. ..++|||+ +++|.+++.. ....++..+++.|+.||+.||+|||++ ||+||||||+|||
T Consensus 113 ~~~~~-----~~-------~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIl 179 (397)
T 1wak_A 113 SGVNG-----TH-------ICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENIL 179 (397)
T ss_dssp EETTE-----EE-------EEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEE
T ss_pred cCCCC-----ce-------EEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHee
Confidence 11000 00 11378999 5666666644 335688889999999999999999998 9999999999999
Q ss_pred EccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 362 LLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 362 l~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
|+.++.....+++............... ......+.. ..+. ............
T Consensus 180 l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----------------~~~~--------~~~~~~~~~~~~ 232 (397)
T 1wak_A 180 LSVNEQYIRRLAAEATEWQRSGAPPPSG---SAVSTAPAT----------------AGNF--------LVNPLEPKNAEK 232 (397)
T ss_dssp ECCCHHHHHHHHHHHC----------------------------------------CCTT--------SCCTTSGGGGGG
T ss_pred EeccchhhhhhhhhhHHHhhcCCCCCCC---CccccCCcc----------------cccc--------cccccccccccc
Confidence 9877632111111111100000000000 000000000 0000 000000000011
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHH
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVL 521 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvl 521 (1092)
...+|.|||.+.... ...+..+||++|+|||++.+..++.++|||||||+
T Consensus 233 ~~~kl~DfG~a~~~~------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 282 (397)
T 1wak_A 233 LKVKIADLGNACWVH------------------------------KHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACM 282 (397)
T ss_dssp CCEEECCGGGCEETT------------------------------BCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHH
T ss_pred cceEecccccccccc------------------------------ccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHH
Confidence 123455555332110 01124578999999999999999999999999999
Q ss_pred HHHHcCC---CCcH--------HHHHHHHHhccccCCC-----------------------C---------------CCC
Q 001366 522 FFELFGR---FDSE--------RALAAAMSDLRDRILP-----------------------P---------------SFL 552 (1092)
Q Consensus 522 l~ell~~---f~~~--------~~~~~~~~~~~~~~~p-----------------------~---------------~~~ 552 (1092)
||||+++ |.+. ......+..+.....+ . ...
T Consensus 283 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (397)
T 1wak_A 283 AFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQ 362 (397)
T ss_dssp HHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCH
T ss_pred HHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccch
Confidence 9999986 4321 1122222111111000 0 000
Q ss_pred CCChhHHHHHHhccccCCCCCCCHHHHhhhhhhh
Q 001366 553 SENPKEAGFCLWQLHPEPLSRPTTREILQSEVTN 586 (1092)
Q Consensus 553 ~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~ 586 (1092)
..++.+.+||.+||++||.+|||+.|+|+||||+
T Consensus 363 ~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 396 (397)
T 1wak_A 363 EEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396 (397)
T ss_dssp HHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred hhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence 1124577999999999999999999999999996
No 292
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=4.9e-30 Score=292.84 Aligned_cols=246 Identities=12% Similarity=0.097 Sum_probs=174.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|.||+|.....-...+..++.|++.............++..++...+|||++.++.........+
T Consensus 54 ~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~----------- 122 (333)
T 1mqb_A 54 AGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM----------- 122 (333)
T ss_dssp ECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE-----------
T ss_pred cCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE-----------
Confidence 347899999875321111122355555533222223334556677788889999998776644322222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
++|||++|++|.+++......++..+++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++..
T Consensus 123 -----lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 123 -----IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp -----EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred -----EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 389999999999999877677889899999999999999999999999999999999999999999999998765
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
......
T Consensus 198 ~~~~~~-------------------------------------------------------------------------- 203 (333)
T 1mqb_A 198 EDDPEA-------------------------------------------------------------------------- 203 (333)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccc--------------------------------------------------------------------------
Confidence 411000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHHH
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERAL 535 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~~ 535 (1092)
........+|+.|+|||++.+..++.++|||||||+||||++ + |......
T Consensus 204 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~ 257 (333)
T 1mqb_A 204 --------------------------TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH 257 (333)
T ss_dssp ---------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred --------------------------ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH
Confidence 000012346788999999999999999999999999999997 5 4322222
Q ss_pred HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 536 ~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
..+..+.....++.....++.+.+|+.+||+.||.+||++.+++++
T Consensus 258 -~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 303 (333)
T 1mqb_A 258 -EVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI 303 (333)
T ss_dssp -HHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred -HHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 2233333333334445567889999999999999999999999885
No 293
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.96 E-value=2.1e-30 Score=294.78 Aligned_cols=247 Identities=17% Similarity=0.162 Sum_probs=169.3
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCC------CCccccceecCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPK------PVGVGTAVVSNG 285 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 285 (1092)
|.+.+.++ +.|.||++.... ..+..++.|+.... ........++...+...+|++ ++.+++....+.
T Consensus 16 y~~~~~lg~G~~g~V~~~~~~~---~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 16 YEIVDTLGEGAFGKVVECIDHK---AGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp EEEEEEEEEETTEEEEEEEETT---TTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred eEEEEEEecCCCeEEEEEEecC---CCCcEEEEEEEecC--CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 55555544 789999986411 11445666665321 122233334444444444443 444444333222
Q ss_pred CCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc
Q 001366 286 SLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~ 364 (1092)
..+ ++|||+ |++|.+++...+ ..++..+++.++.||+.||+|||++||+||||||+|||++.
T Consensus 91 ~~~----------------lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~ 153 (339)
T 1z57_A 91 HIC----------------IVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQ 153 (339)
T ss_dssp EEE----------------EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESC
T ss_pred cEE----------------EEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEec
Confidence 222 379999 999999997665 35788899999999999999999999999999999999987
Q ss_pred -------------------CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCccccc
Q 001366 365 -------------------SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSR 425 (1092)
Q Consensus 365 -------------------~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (1092)
++.+|++|||+++....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~-------------------------------------------- 189 (339)
T 1z57_A 154 SDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE-------------------------------------------- 189 (339)
T ss_dssp CCEEEEEC----CEEEEESCCCEEECCCSSCEETTS--------------------------------------------
T ss_pred cccccccCCccccccccccCCCceEeeCcccccCcc--------------------------------------------
Confidence 56788999987754220
Q ss_pred ccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc
Q 001366 426 WWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS 505 (1092)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~ 505 (1092)
......||+.|+|||++.
T Consensus 190 --------------------------------------------------------------~~~~~~gt~~y~aPE~~~ 207 (339)
T 1z57_A 190 --------------------------------------------------------------HHSTLVSTRHYRAPEVIL 207 (339)
T ss_dssp --------------------------------------------------------------CCCSSCSCGGGCCHHHHT
T ss_pred --------------------------------------------------------------ccccccCCccccChHHhh
Confidence 001356899999999999
Q ss_pred CCCCCccccchhhhHHHHHHcCC---CCcHHHH--HHHHHhccccCCCC-------------------------------
Q 001366 506 GGVCTTSSNIYSLGVLFFELFGR---FDSERAL--AAAMSDLRDRILPP------------------------------- 549 (1092)
Q Consensus 506 ~~~~t~~sDIwSLGvll~ell~~---f~~~~~~--~~~~~~~~~~~~p~------------------------------- 549 (1092)
+..++.++|||||||+||||+++ |...... ...+..+.. .+|+
T Consensus 208 ~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (339)
T 1z57_A 208 ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILG-PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSR 286 (339)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHC-SCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHH
T ss_pred CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CCCHHHHhhccchhHHhhccccccccccccchhhh
Confidence 99999999999999999999986 4433222 122211111 1110
Q ss_pred ----------CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 550 ----------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 550 ----------~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
.....++.+.+|+.+||++||.+|||+.|+|+||||...+
T Consensus 287 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 336 (339)
T 1z57_A 287 ACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLK 336 (339)
T ss_dssp HCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred cCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHh
Confidence 0011135678999999999999999999999999998754
No 294
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.96 E-value=3.5e-30 Score=290.68 Aligned_cols=266 Identities=19% Similarity=0.167 Sum_probs=179.0
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.++ |.|.||++...+ .+..++.|++... .........++...+...+|||++.+++..........
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~-- 85 (320)
T 2i6l_A 13 YMDLKPLGCGGNGLVFSAVDND----CDKRVAIKKIVLT-DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT-- 85 (320)
T ss_dssp EEEEEECC-----CEEEEEETT----TTEEEEEEEEECC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCC--
T ss_pred eeEEEEeccCCCeEEEEEEECC----CCeEEEEEEEecC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccc--
Confidence 44444444 689999997632 3455666655322 22233445567778888899999987665432211110
Q ss_pred cCCCCCccc--cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc-cCCcE
Q 001366 292 RTGVPASCW--IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL-QSNQV 368 (1092)
Q Consensus 292 ~~~~~~~~~--~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~-~~~~v 368 (1092)
..+ ..+. ....++|||++ ++|.++++.. .++..+++.++.||+.||+|||++||+||||||+||+++ .++.+
T Consensus 86 -~~~-~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 86 -DDV-GSLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp -C-----CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEE
T ss_pred -ccc-ccccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeE
Confidence 000 0000 11235899998 4999999753 577889999999999999999999999999999999997 56799
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++.......
T Consensus 161 kl~Dfg~~~~~~~~~~---------------------------------------------------------------- 176 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYS---------------------------------------------------------------- 176 (320)
T ss_dssp EECCCTTCBCC---------------------------------------------------------------------
T ss_pred EEccCccccccCCCcc----------------------------------------------------------------
Confidence 9999999876431000
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-CCCCccccchhhhHHHHHHcC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-GVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~t~~sDIwSLGvll~ell~ 527 (1092)
.........||++|+|||++.+ ..++.++|||||||+||||++
T Consensus 177 ------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~ 220 (320)
T 2i6l_A 177 ------------------------------------HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 220 (320)
T ss_dssp ---------------------------------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------cccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHh
Confidence 0001124567999999999876 678999999999999999998
Q ss_pred C---CCcHHHHHHHHHhccccCC-----------------------C-----CCCCCCChhHHHHHHhccccCCCCCCCH
Q 001366 528 R---FDSERALAAAMSDLRDRIL-----------------------P-----PSFLSENPKEAGFCLWQLHPEPLSRPTT 576 (1092)
Q Consensus 528 ~---f~~~~~~~~~~~~~~~~~~-----------------------p-----~~~~~~~~~~~~li~~lL~~dP~~Rpsa 576 (1092)
+ |.+................ + ......++.+.+|+.+||++||.+|||+
T Consensus 221 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 300 (320)
T 2i6l_A 221 GKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTA 300 (320)
T ss_dssp SSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCH
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCH
Confidence 5 5443332222211111000 0 1123467889999999999999999999
Q ss_pred HHHhhhhhhhhhhcc
Q 001366 577 REILQSEVTNEFQEV 591 (1092)
Q Consensus 577 ~eiL~~~~~~~~~~~ 591 (1092)
.|+|+||||.....+
T Consensus 301 ~ell~hp~~~~~~~p 315 (320)
T 2i6l_A 301 EEALSHPYMSIYSFP 315 (320)
T ss_dssp HHHHTSHHHHTTCC-
T ss_pred HHHhCCcccccccCc
Confidence 999999999875443
No 295
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.96 E-value=5.9e-30 Score=281.73 Aligned_cols=244 Identities=15% Similarity=0.111 Sum_probs=181.0
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
+..|.+.+.++ |.|.||+|... +..++.|++...... .......++...+...+|||++.++........
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~- 81 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ------GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPA- 81 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET------TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTS-
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC------CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCC-
Confidence 44555555554 78999999873 344566665433322 233445567777888899999987765432210
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHhhhcC--ccccCCCCCCeEEcc
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVALVDYHHTQG--VTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~-~~~~~~~~~i~~qil~~l~~lHs~g--IvHrDLKP~Nill~~ 364 (1092)
... ..+|||++|++|.+++..... .++..+++.|+.||+.||.|||++| |+||||||+||+++.
T Consensus 82 ------~~~-------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~ 148 (271)
T 3kmu_A 82 ------PHP-------TLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDE 148 (271)
T ss_dssp ------SSC-------EEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECT
T ss_pred ------CCe-------EeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcC
Confidence 111 138999999999999977543 5788899999999999999999999 999999999999999
Q ss_pred CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 365 ~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
++.++++|||++....
T Consensus 149 ~~~~~l~~~~~~~~~~---------------------------------------------------------------- 164 (271)
T 3kmu_A 149 DMTARISMADVKFSFQ---------------------------------------------------------------- 164 (271)
T ss_dssp TSCEEEEGGGSCCTTS----------------------------------------------------------------
T ss_pred CcceeEEeccceeeec----------------------------------------------------------------
Confidence 9999999887543211
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCc---cccchhhhHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTT---SSNIYSLGVL 521 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~---~sDIwSLGvl 521 (1092)
.....||+.|+|||.+.+..++. ++|||||||+
T Consensus 165 --------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~i 200 (271)
T 3kmu_A 165 --------------------------------------------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVL 200 (271)
T ss_dssp --------------------------------------------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHH
T ss_pred --------------------------------------------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHH
Confidence 01346789999999998865544 8999999999
Q ss_pred HHHHcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 522 FFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 522 l~ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
+|||+++ |..................++.....++.+.+|+.+||++||.+|||+.++++.
T Consensus 201 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (271)
T 3kmu_A 201 LWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPI 264 (271)
T ss_dssp HHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999985 544444444444444444444445668899999999999999999999999873
No 296
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.96 E-value=2.6e-30 Score=293.87 Aligned_cols=249 Identities=15% Similarity=0.098 Sum_probs=177.8
Q ss_pred CchhHHHhhhcc--ccceeeeCCCCCccccccccc--cccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecC
Q 001366 210 GFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMI--DTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSN 284 (1092)
Q Consensus 210 ~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 284 (1092)
.+..|.+.+.++ |.|.||++.... .+..+ +.|+..............++...+... +|||++.+++....+
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 98 (327)
T 1fvr_A 23 DWNDIKFQDVIGEGNFGQVLKARIKK----DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR 98 (327)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEE----TTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEET
T ss_pred cHHHccceeeeecCCCceEEEEEEcc----CCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeC
Confidence 344555555554 789999997622 12222 333332222222223344555667777 899999887765543
Q ss_pred CCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHhhhcC
Q 001366 285 GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG---------------HKGKRIECLYIFRQIVALVDYHHTQG 349 (1092)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---------------~~~~~~~~~~i~~qil~~l~~lHs~g 349 (1092)
...+ ++|||++|++|.+++...+ ..++..+++.++.||+.||.|||++|
T Consensus 99 ~~~~----------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 162 (327)
T 1fvr_A 99 GYLY----------------LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ 162 (327)
T ss_dssp TEEE----------------EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CceE----------------EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3333 3899999999999997653 46888899999999999999999999
Q ss_pred ccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCccccccccc
Q 001366 350 VTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSL 429 (1092)
Q Consensus 350 IvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (1092)
|+||||||+||+++.++.+||+|||+++......
T Consensus 163 ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~---------------------------------------------- 196 (327)
T 1fvr_A 163 FIHRDLAARNILVGENYVAKIADFGLSRGQEVYV---------------------------------------------- 196 (327)
T ss_dssp EECSCCSGGGEEECGGGCEEECCTTCEESSCEEC----------------------------------------------
T ss_pred ccCCCCccceEEEcCCCeEEEcccCcCccccccc----------------------------------------------
Confidence 9999999999999999999999999886422000
Q ss_pred ccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC
Q 001366 430 FPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC 509 (1092)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~ 509 (1092)
......+|+.|+|||.+.+..+
T Consensus 197 ----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~ 218 (327)
T 1fvr_A 197 ----------------------------------------------------------KKTMGRLPVRWMAIESLNYSVY 218 (327)
T ss_dssp ----------------------------------------------------------CC----CCTTTCCHHHHHHCEE
T ss_pred ----------------------------------------------------------cccCCCCCccccChhhhccccC
Confidence 0012346778999999998889
Q ss_pred CccccchhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 510 TTSSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 510 t~~sDIwSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
+.++|||||||+||||++ + |..... ...+..+.....++.....++.+.+|+.+||++||.+|||+.+++++-
T Consensus 219 ~~~~Di~slG~il~ellt~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 295 (327)
T 1fvr_A 219 TTNSDVWSYGVLLWEIVSLGGTPYCGMTC-AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 295 (327)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTTTCCH-HHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CchhcchHHHHHHHHHHcCCCCCCCCCcH-HHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 999999999999999997 5 433322 223333333333344445678899999999999999999999999873
No 297
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.96 E-value=2.7e-30 Score=285.05 Aligned_cols=242 Identities=20% Similarity=0.195 Sum_probs=173.1
Q ss_pred hhHHHhhhc--cccceeeeCCCCCccccccccccccccccccCc---hhhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 212 SEFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP---SDAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 212 ~~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
.+|.+.+.+ +|.|.||++... +..++.|++...... .......++..++...+|||++.++.....+..
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI------GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET------TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--
T ss_pred hheeeeeeeccCCCeEEEEEEEc------CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence 344444444 478999999863 344555554322111 112334456667778899999987766443332
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcC---ccccCCCCCCeEEc
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG---VTFLDLKPSSFKLL 363 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~g---IvHrDLKP~Nill~ 363 (1092)
.+ .+|||++|++|.++++.. .++..+++.++.||+.||.|||++| |+||||||+||+++
T Consensus 81 ~~----------------lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~ 142 (271)
T 3dtc_A 81 LC----------------LVMEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILIL 142 (271)
T ss_dssp CE----------------EEEECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEES
T ss_pred eE----------------EEEEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEe
Confidence 22 389999999999999643 6788899999999999999999999 89999999999998
Q ss_pred c--------CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccC
Q 001366 364 Q--------SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYG 435 (1092)
Q Consensus 364 ~--------~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1092)
. .+.+|++|||+++......
T Consensus 143 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------------- 170 (271)
T 3dtc_A 143 QKVENGDLSNKILKITDFGLAREWHRTT---------------------------------------------------- 170 (271)
T ss_dssp SCCSSSCCSSCCEEECCCCC------------------------------------------------------------
T ss_pred cccccccccCcceEEccCCccccccccc----------------------------------------------------
Confidence 6 7789999999886543100
Q ss_pred CcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccc
Q 001366 436 NKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNI 515 (1092)
Q Consensus 436 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDI 515 (1092)
.....||+.|+|||.+.+..++.++||
T Consensus 171 -----------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di 197 (271)
T 3dtc_A 171 -----------------------------------------------------KMSAAGAYAWMAPEVIRASMFSKGSDV 197 (271)
T ss_dssp ----------------------------------------------------------CCGGGSCHHHHHHCCCSHHHHH
T ss_pred -----------------------------------------------------ccCCCCccceeCHHHhccCCCCchhhH
Confidence 003468899999999999899999999
Q ss_pred hhhhHHHHHHcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 516 YSLGVLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 516 wSLGvll~ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|||||++|||+++ |..................++.....++.+.+|+.+||++||.+|||+.|++++
T Consensus 198 ~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 198 WSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp HHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 9999999999985 544444444333333333334445567889999999999999999999999985
No 298
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.96 E-value=3.2e-30 Score=293.73 Aligned_cols=245 Identities=13% Similarity=0.100 Sum_probs=174.5
Q ss_pred cccceeeeCCCCCc-cccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 221 KGKGIVCRGPPLNA-FKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
+|.|.||++..... -......++.|+..............++...+... +|||++.++.........+
T Consensus 57 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~---------- 126 (333)
T 2i1m_A 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL---------- 126 (333)
T ss_dssp CSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE----------
T ss_pred CCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceE----------
Confidence 47899999975220 01112234555543332222334445666667776 8999998877654333222
Q ss_pred cccCCCcccccCCCCCHHHHHhhc-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNAR-------------GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS 365 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~-------------~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~ 365 (1092)
++|||++|++|.++|... ...++..+++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 127 ------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 127 ------VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG 200 (333)
T ss_dssp ------EEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGG
T ss_pred ------EEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCC
Confidence 389999999999999653 2356888999999999999999999999999999999999999
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+.+||+|||+++.......
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~------------------------------------------------------------- 219 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSN------------------------------------------------------------- 219 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTT-------------------------------------------------------------
T ss_pred CeEEECccccccccccccc-------------------------------------------------------------
Confidence 9999999999876441100
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL 525 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~el 525 (1092)
........||+.|+|||.+.+..++.++|||||||+||||
T Consensus 220 ----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 259 (333)
T 2i1m_A 220 ----------------------------------------YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259 (333)
T ss_dssp ----------------------------------------SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------eeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHH
Confidence 0000134578889999999998999999999999999999
Q ss_pred cC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 526 FG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 526 l~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
++ + |............+.....++.....++.+.+|+.+||++||.+|||+.+++++
T Consensus 260 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 320 (333)
T 2i1m_A 260 FSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSF 320 (333)
T ss_dssp TTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 97 4 433221122222222222233333457889999999999999999999999874
No 299
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.96 E-value=3.6e-30 Score=292.44 Aligned_cols=240 Identities=14% Similarity=0.082 Sum_probs=171.0
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|.||+|... +..++.|++... ........++...+...+||||+.++.......... .-
T Consensus 34 ~G~~g~Vy~~~~~------~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~-----~~---- 96 (322)
T 3soc_A 34 RGRFGCVWKAQLL------NEYVAVKIFPIQ--DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVD-----VD---- 96 (322)
T ss_dssp CSTTCEEEEEEET------TEEEEEEEECGG--GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSS-----EE----
T ss_pred ccCceEEEEEEEC------CCEEEEEEeecC--chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCC-----ce----
Confidence 3588999999763 355666665332 222333444666778889999999877655432211 00
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhc----------CccccCCCCCCeEEccCCcEE
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ----------GVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~----------gIvHrDLKP~Nill~~~~~vk 369 (1092)
..++||||+|++|.++|+.. .++..+++.++.||+.||.|||++ ||+||||||+|||++.++.+|
T Consensus 97 ---~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~k 171 (322)
T 3soc_A 97 ---LWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171 (322)
T ss_dssp ---EEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEE
T ss_pred ---EEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEE
Confidence 11389999999999999775 488889999999999999999999 999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+++.......
T Consensus 172 L~DFg~a~~~~~~~~----------------------------------------------------------------- 186 (322)
T 3soc_A 172 IADFGLALKFEAGKS----------------------------------------------------------------- 186 (322)
T ss_dssp ECCCTTCEEECTTSC-----------------------------------------------------------------
T ss_pred EccCCcccccccccC-----------------------------------------------------------------
Confidence 999999976541100
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-----CCCCccccchhhhHHHHH
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----GVCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----~~~t~~sDIwSLGvll~e 524 (1092)
........||+.|+|||++.+ ..++.++|||||||+|||
T Consensus 187 ------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~e 230 (322)
T 3soc_A 187 ------------------------------------AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWE 230 (322)
T ss_dssp ------------------------------------CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHH
Confidence 000114578999999999987 356789999999999999
Q ss_pred HcCC---CCcHH---------------HHHHHHHhccccCCCCCCCC------CChhHHHHHHhccccCCCCCCCHHHHh
Q 001366 525 LFGR---FDSER---------------ALAAAMSDLRDRILPPSFLS------ENPKEAGFCLWQLHPEPLSRPTTREIL 580 (1092)
Q Consensus 525 ll~~---f~~~~---------------~~~~~~~~~~~~~~p~~~~~------~~~~~~~li~~lL~~dP~~Rpsa~eiL 580 (1092)
|+++ |.+.. ...............+.+.. ..+.+.+|+.+||++||.+|||+.|++
T Consensus 231 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell 310 (322)
T 3soc_A 231 LASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVG 310 (322)
T ss_dssp HHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHH
Confidence 9986 32110 11111111112222222111 124488999999999999999999998
Q ss_pred hh
Q 001366 581 QS 582 (1092)
Q Consensus 581 ~~ 582 (1092)
+.
T Consensus 311 ~~ 312 (322)
T 3soc_A 311 ER 312 (322)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 300
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.96 E-value=5.7e-30 Score=281.63 Aligned_cols=244 Identities=16% Similarity=0.136 Sum_probs=180.0
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
+|.+.+.+ ++.|.||++...+ +..++.|++..... ......++...+...+|||++.++.....+...+
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~-----~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~-- 79 (267)
T 3t9t_A 9 ELTFVQEIGSGQFGLVHLGYWLN-----KDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPIC-- 79 (267)
T ss_dssp GEEEEEEEEEETTEEEEEEEETT-----TEEEEEEEECTTTB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE--
T ss_pred heeeeeEecCCCceeEEEEEecC-----CCeEEEEEccccCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeE--
Confidence 44444444 4789999998643 34455555533222 2234455666777889999998776654332222
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
.+|||++|++|.+++......++..+++.++.||+.||.|||++||+||||||+||+++.++.+|+
T Consensus 80 --------------lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl 145 (267)
T 3t9t_A 80 --------------LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV 145 (267)
T ss_dssp --------------EEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEE
T ss_pred --------------EEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEE
Confidence 389999999999999887667888899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++.......
T Consensus 146 ~dfg~~~~~~~~~~------------------------------------------------------------------ 159 (267)
T 3t9t_A 146 SDFGMTRFVLDDQY------------------------------------------------------------------ 159 (267)
T ss_dssp CCTTGGGGBCCHHH------------------------------------------------------------------
T ss_pred cccccccccccccc------------------------------------------------------------------
Confidence 99999876431000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~- 528 (1092)
.......||+.|+|||++.+..++.++|||||||++|||++ +
T Consensus 160 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~ 203 (267)
T 3t9t_A 160 ------------------------------------TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 203 (267)
T ss_dssp ------------------------------------HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred ------------------------------------cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCC
Confidence 00013356778999999998899999999999999999998 4
Q ss_pred --CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|...... .....+.....+......++.+.+|+.+||+.||.+||++.+++++
T Consensus 204 ~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (267)
T 3t9t_A 204 IPYENRSNS-EVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 258 (267)
T ss_dssp CTTTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCHH-HHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 3332222 2222232222222233457889999999999999999999999975
No 301
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.96 E-value=9.4e-30 Score=288.91 Aligned_cols=250 Identities=14% Similarity=0.103 Sum_probs=177.1
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||++...+ +..++.|+..............++..++...+|||++.++.........+
T Consensus 32 y~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~--- 103 (326)
T 3uim_A 32 FSNKNILGRGGFGKVYKGRLAD-----GTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL--- 103 (326)
T ss_dssp SCSTTEEECCSSSEEEEECCSS-----SCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCE---
T ss_pred cccceeEecCCCcEEEEEEecC-----CCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceE---
Confidence 4444433 4789999998644 45566665543322222223455666788889999998777654332222
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhhhc---CccccCCCCCCeEEccC
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARG---HKGKRIECLYIFRQIVALVDYHHTQ---GVTFLDLKPSSFKLLQS 365 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~---~~~~~~~~~~i~~qil~~l~~lHs~---gIvHrDLKP~Nill~~~ 365 (1092)
.+|||++|++|.+++.... ..++...++.|+.||+.||+|||++ ||+||||||+|||++.+
T Consensus 104 -------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~ 170 (326)
T 3uim_A 104 -------------LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 170 (326)
T ss_dssp -------------EEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT
T ss_pred -------------EEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC
Confidence 3899999999999997643 3478889999999999999999999 99999999999999999
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+.+||+|||+++......
T Consensus 171 ~~~kl~Dfg~~~~~~~~~-------------------------------------------------------------- 188 (326)
T 3uim_A 171 FEAVVGDFGLAKLMDYKD-------------------------------------------------------------- 188 (326)
T ss_dssp CCEEECCCSSCEECCSSS--------------------------------------------------------------
T ss_pred CCEEeccCccccccCccc--------------------------------------------------------------
Confidence 999999999987643100
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL 525 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~el 525 (1092)
........||+.|+|||.+.+..++.++|||||||++|||
T Consensus 189 ----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l 228 (326)
T 3uim_A 189 ----------------------------------------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLEL 228 (326)
T ss_dssp ----------------------------------------SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHH
Confidence 0001134689999999999988999999999999999999
Q ss_pred cCCCCcHHH----------HHHHHHhc-cccCCC--------CCC-CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 526 FGRFDSERA----------LAAAMSDL-RDRILP--------PSF-LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 526 l~~f~~~~~----------~~~~~~~~-~~~~~p--------~~~-~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
+++..+... ...+.... ....+. +.+ ....+.+.+|+.+||++||.+|||+.||+++..-
T Consensus 229 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 229 ITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp HHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 986332211 11111111 111111 111 1112557899999999999999999999998754
Q ss_pred h
Q 001366 586 N 586 (1092)
Q Consensus 586 ~ 586 (1092)
.
T Consensus 309 ~ 309 (326)
T 3uim_A 309 D 309 (326)
T ss_dssp S
T ss_pred c
Confidence 3
No 302
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.96 E-value=3.9e-30 Score=290.49 Aligned_cols=253 Identities=15% Similarity=0.121 Sum_probs=172.7
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHh-hhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAAL-KAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
+.+|.+...++ |.|.||++... ..+..++.|++........... ......++....|||++.++.....+...
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~ 99 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFR----KTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDV 99 (318)
T ss_dssp GGGEEEEEEC------CEEEEEET----TTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred hccccccceeeecCCeeEEEEEEe----cCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcE
Confidence 44555555554 68999999763 1245666666543333222222 23333457778999999887765543332
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhc-CccccCCCCCCeEEccCC
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ-GVTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~-gIvHrDLKP~Nill~~~~ 366 (1092)
+ ++|||+ |+.+..++......++...++.++.||+.||.|||++ ||+||||||+||+++.++
T Consensus 100 ~----------------lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~ 162 (318)
T 2dyl_A 100 F----------------IAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG 162 (318)
T ss_dssp E----------------EEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTS
T ss_pred E----------------EEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCC
Confidence 3 379998 6677777766566788889999999999999999995 999999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+||+|||+++......
T Consensus 163 ~~kl~dfg~~~~~~~~~--------------------------------------------------------------- 179 (318)
T 2dyl_A 163 QIKLCDFGISGRLVDDK--------------------------------------------------------------- 179 (318)
T ss_dssp CEEECCCTTC----------------------------------------------------------------------
T ss_pred CEEEEECCCchhccCCc---------------------------------------------------------------
Confidence 99999999886543100
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc-----CCCCCccccchhhhHH
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS-----GGVCTTSSNIYSLGVL 521 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-----~~~~t~~sDIwSLGvl 521 (1092)
......||+.|+|||++. +..++.++|||||||+
T Consensus 180 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i 218 (318)
T 2dyl_A 180 -----------------------------------------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGIS 218 (318)
T ss_dssp ------------------------------------------------CCTTCCHHHHC--------CCTHHHHHHHHHH
T ss_pred -----------------------------------------cccccCCCccccChhhcccccccccCCccccchhhHHHH
Confidence 001346899999999995 4568999999999999
Q ss_pred HHHHcCC---CCcHHHHHHHHHhcccc--CCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 522 FFELFGR---FDSERALAAAMSDLRDR--ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 522 l~ell~~---f~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
||||+++ |.........+..+... ...+.....++.+.+|+.+||++||.+||++.+||+||||...
T Consensus 219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 219 LVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290 (318)
T ss_dssp HHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred HHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence 9999985 43311112222222221 2223334568899999999999999999999999999999865
No 303
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.96 E-value=6.9e-30 Score=290.93 Aligned_cols=241 Identities=12% Similarity=0.093 Sum_probs=174.1
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
+|.|.||+|... ..+..++.|+....... ....++...+... .|||++.++.........+
T Consensus 20 G~~g~V~~~~~~----~~~~~vavK~~~~~~~~---~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~----------- 81 (330)
T 2izr_A 20 GNFGELRLGKNL----YTNEYVAIKLEPMKSRA---PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNA----------- 81 (330)
T ss_dssp -CTTSEEEEEET----TTTEEEEEEEEETTCSS---CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEE-----------
T ss_pred cCCceEEEEEEC----CCCcEEEEEEeccccch---HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccE-----------
Confidence 478999999842 22556666665332221 1223444555565 8999998876655433333
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc-----EEEeccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ-----VKYIGPI 374 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~-----vkl~Dfg 374 (1092)
.+|||+ |++|.+++...+..++..+++.|+.||+.||+|||++||+||||||+|||++.++. +||+|||
T Consensus 82 -----lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg 155 (330)
T 2izr_A 82 -----MVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 155 (330)
T ss_dssp -----EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred -----EEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence 389999 99999999876667899999999999999999999999999999999999998887 9999999
Q ss_pred ccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCC
Q 001366 375 IQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHS 454 (1092)
Q Consensus 375 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 454 (1092)
+++.+.......
T Consensus 156 ~a~~~~~~~~~~-------------------------------------------------------------------- 167 (330)
T 2izr_A 156 LAKEYIDPETKK-------------------------------------------------------------------- 167 (330)
T ss_dssp TCEESBCTTTCC--------------------------------------------------------------------
T ss_pred cceeeecCCCCc--------------------------------------------------------------------
Confidence 998754211000
Q ss_pred CCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCc
Q 001366 455 HNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDS 531 (1092)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~ 531 (1092)
..+.......+||+.|+|||.+.+..++.++|||||||+||||+++ |..
T Consensus 168 ----------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~ 219 (330)
T 2izr_A 168 ----------------------------HIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQG 219 (330)
T ss_dssp ----------------------------BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ----------------------------cccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccc
Confidence 0001112256899999999999999999999999999999999986 432
Q ss_pred H--HHHHHHHHh---ccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 532 E--RALAAAMSD---LRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 532 ~--~~~~~~~~~---~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
. ......+.. ......++......|.+.+|+.+||..||.+||++.+|++
T Consensus 220 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 220 LKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp CCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred cccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 1 112222222 2222222233444668999999999999999999998886
No 304
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.96 E-value=1.2e-29 Score=282.79 Aligned_cols=248 Identities=16% Similarity=0.208 Sum_probs=181.7
Q ss_pred HHHhhhcc--ccceeeeCCCCCcccccccccccccccccc-CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTT-MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.++ |.|.||++.... .+..++.|++.... .........++...+...+|||++.++.........+
T Consensus 24 y~i~~~lg~G~~g~V~~~~~~~----~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~-- 97 (287)
T 2wei_A 24 YNIVCMLGKGSFGEVLKCKDRI----TQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY-- 97 (287)
T ss_dssp EEEEEEEEEETTEEEEEEEETT----TCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE--
T ss_pred ceeeEEEcCCCCEEEEEEEEcC----CCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE--
Confidence 44444443 789999997631 24556666653222 1223344456677788889999998776644322222
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC---c
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN---Q 367 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~---~ 367 (1092)
.+|||++|++|.+++...+ .++..+++.++.||+.||.|||++||+||||||+||+++..+ .
T Consensus 98 --------------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~ 162 (287)
T 2wei_A 98 --------------IVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCD 162 (287)
T ss_dssp --------------EEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCC
T ss_pred --------------EEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCccc
Confidence 3899999999999997654 477889999999999999999999999999999999997644 6
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+||+|||+++.....
T Consensus 163 ~kL~Dfg~~~~~~~~----------------------------------------------------------------- 177 (287)
T 2wei_A 163 IKIIDFGLSTCFQQN----------------------------------------------------------------- 177 (287)
T ss_dssp EEECSTTGGGTBCCC-----------------------------------------------------------------
T ss_pred EEEeccCcceeecCC-----------------------------------------------------------------
Confidence 999999988764310
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~ 527 (1092)
.......||+.|+|||.+.+ .++.++|||||||+||+|++
T Consensus 178 ---------------------------------------~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~ 217 (287)
T 2wei_A 178 ---------------------------------------TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLS 217 (287)
T ss_dssp ---------------------------------------SSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHh
Confidence 00113468899999999876 58999999999999999998
Q ss_pred C---CCcHHHHHHHHHhccccC---CCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 528 R---FDSERALAAAMSDLRDRI---LPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 528 ~---f~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
+ |........ ...+.... ..+.+...++.+.+|+.+||++||.+|||+.++|+||||.+.
T Consensus 218 g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 218 GTPPFYGKNEYDI-LKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp SSCSSCCSSHHHH-HHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred CCCCCCCCCHHHH-HHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 5 443332222 22222221 223345668899999999999999999999999999999865
No 305
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1e-28 Score=293.55 Aligned_cols=265 Identities=14% Similarity=0.089 Sum_probs=211.9
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEE
Q 001366 777 NSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLW 856 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IW 856 (1092)
.-...|.+|+|+|||+++|||+.|++|+ |.... ....+|...|.+|+|+|+ + .++++.+|
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~----------~~l~gh~~~v~~V~FsPd-g-------~~~~~~~~ 72 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA----------KDINCNSKNLFHVKEFPL-E-------FENKLDFE 72 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCC----------SCCSSBGGGTEEEEEECC-C-------CCCTTTTS
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--ccccc----------ceecCCCccEEEEEECCC-C-------CcceEEEE
Confidence 3456889999999999999999999999 63321 111478999999999998 4 56666666
Q ss_pred ECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCC-----ceEEEEEccCCCeEEEE
Q 001366 857 DACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIA-----NVCCVQFSAHSSHLLAF 931 (1092)
Q Consensus 857 D~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~-----~V~sl~fsp~~~~~lat 931 (1092)
+.... .+..+ .|...|++++|+| ++..||+++.||+|++||... ++..+.+.. .|.+++|+|+|. +||+
T Consensus 73 ~~~~~-~~~~~-~~~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~-~LAs 146 (588)
T 2j04_A 73 LAQQN-GLLNS-QPVCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIES-SIVV 146 (588)
T ss_dssp CCCSS-CSSTT-SCSCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSS-CEEE
T ss_pred eCCCc-eEeec-CCCCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCC-EEEE
Confidence 54322 22222 5688899999999 999999999999999999654 666666333 499999999995 9999
Q ss_pred EECCCeEEEEEcCCCCc------ceEEe----cCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEE
Q 001366 932 GSADYRTYCYDLRNARA------PWCVL----AGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLT 1001 (1092)
Q Consensus 932 gs~Dg~I~vwDlr~~~~------~~~~l----~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~ 1001 (1092)
|+.||+|++||+.++.. .+.++ .+|...|.+++|++++ +++++.|++|++||+..... .....+
T Consensus 147 gs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~-----~~~~~t 220 (588)
T 2j04_A 147 GNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSH-----QPVSRM 220 (588)
T ss_dssp EETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSS-----CCCEEE
T ss_pred EcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCcc-----ccceee
Confidence 99999999999998642 24565 7788999999999777 99999999999999984321 112356
Q ss_pred E-cCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEE--eCCCCEEE
Q 001366 1002 F-SGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCW--RRRSDMVV 1078 (1092)
Q Consensus 1002 l-~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~--spd~~~La 1078 (1092)
+ .+|...|.+++|+ |.+||+++ +++|++|+...++... .. .+|...|++|+| +|++..|+
T Consensus 221 L~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~-~~-------------~gh~~~V~~va~~~s~d~~~La 283 (588)
T 2j04_A 221 IQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISS-LK-------------TGSLENFHIIPLNHEKESTILL 283 (588)
T ss_dssp EECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEE-EE-------------CSCCSCCCEEEETTCSSCEEEE
T ss_pred ecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEE-EE-------------cCCCceEEEEEeeeCCCCCEEE
Confidence 6 4788999999999 68999998 6999999988765532 21 257889999999 99999999
Q ss_pred EEecCCeEEEEEc
Q 001366 1079 AANSSGCIKVLQM 1091 (1092)
Q Consensus 1079 sgs~DG~V~vW~l 1091 (1092)
+|+.||+ +||.+
T Consensus 284 ~a~edG~-klw~~ 295 (588)
T 2j04_A 284 MSNKTSY-KVLLE 295 (588)
T ss_dssp ECSSCEE-EEEES
T ss_pred EEcCCCC-EEEee
Confidence 9999999 99975
No 306
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.96 E-value=2e-29 Score=280.74 Aligned_cols=242 Identities=15% Similarity=0.182 Sum_probs=176.3
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhh------HhhhhhhhhhccCCCCCCCccccceecC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDA------ALKAAGAMMVASNASPKPVGVGTAVVSN 284 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (1092)
.|.+.+.+ +|.|.||++... ..+..++.|++......... ....++..++...+|||++.++......
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 95 (287)
T 4f0f_A 20 EIEYEKQIGKGGFGLVHKGRLV----KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP 95 (287)
T ss_dssp TEEEEEECCCCSSSCEEEEEET----TTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT
T ss_pred cceehhccccCCceeEEEEEEc----CCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC
Confidence 34444444 478999999762 22455666655332222111 3345566778888999999876543211
Q ss_pred CCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcC--ccccCCCCCCeEE
Q 001366 285 GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQG--VTFLDLKPSSFKL 362 (1092)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~g--IvHrDLKP~Nill 362 (1092)
...+|||++|++|.+++......++...++.++.||+.||+|||++| |+||||||+||++
T Consensus 96 ------------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~ 157 (287)
T 4f0f_A 96 ------------------PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFL 157 (287)
T ss_dssp ------------------TEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEE
T ss_pred ------------------CeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEE
Confidence 11389999999999999877778899899999999999999999999 9999999999999
Q ss_pred ccCCc-----EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCc
Q 001366 363 LQSNQ-----VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNK 437 (1092)
Q Consensus 363 ~~~~~-----vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (1092)
+..+. +|++|||+++....
T Consensus 158 ~~~~~~~~~~~kl~Dfg~~~~~~~-------------------------------------------------------- 181 (287)
T 4f0f_A 158 QSLDENAPVCAKVADFGLSQQSVH-------------------------------------------------------- 181 (287)
T ss_dssp SCCCTTCSCCEEECCCTTCBCCSS--------------------------------------------------------
T ss_pred eccCCCCceeEEeCCCCccccccc--------------------------------------------------------
Confidence 88776 99999998864320
Q ss_pred ccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCccccc--CCCCCccccc
Q 001366 438 IETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELS--GGVCTTSSNI 515 (1092)
Q Consensus 438 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~--~~~~t~~sDI 515 (1092)
......||+.|+|||++. ...++.++||
T Consensus 182 --------------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di 211 (287)
T 4f0f_A 182 --------------------------------------------------SVSGLLGNFQWMAPETIGAEEESYTEKADT 211 (287)
T ss_dssp --------------------------------------------------CEECCCCCCTTSCGGGSSCSSCEECHHHHH
T ss_pred --------------------------------------------------cccccCCCccccCchhhccCCCCcCchhhH
Confidence 011456899999999994 4567999999
Q ss_pred hhhhHHHHHHcCC---CCcHH--HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 516 YSLGVLFFELFGR---FDSER--ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 516 wSLGvll~ell~~---f~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|||||++|||+++ |.... ..............++.....++.+.+|+.+||++||.+|||+.++++.
T Consensus 212 ~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 283 (287)
T 4f0f_A 212 YSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283 (287)
T ss_dssp HHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 9999999999985 33211 1111111222223333344567889999999999999999999999873
No 307
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.96 E-value=8.9e-30 Score=290.52 Aligned_cols=252 Identities=16% Similarity=0.142 Sum_probs=179.9
Q ss_pred hHHHhhhcc--ccceeeeCCCCCc---cccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNA---FKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 286 (1092)
.|.+.+.++ |.|.||++...+. -...+..++.|+..............++..++... +|||++.++.....+..
T Consensus 36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 115 (334)
T 2pvf_A 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 115 (334)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSC
T ss_pred HeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCc
Confidence 444544444 7899999975210 01123445666554333333334445566666666 89999988776543332
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCC---------------CCCHHHHHHHHHHHHHHHHHhhhcCcc
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH---------------KGKRIECLYIFRQIVALVDYHHTQGVT 351 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~---------------~~~~~~~~~i~~qil~~l~~lHs~gIv 351 (1092)
.+ ++|||++|++|.++|..... .++..+++.++.||+.||.|||++||+
T Consensus 116 ~~----------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 179 (334)
T 2pvf_A 116 LY----------------VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 179 (334)
T ss_dssp CE----------------EEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred eE----------------EEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 22 38999999999999976542 377889999999999999999999999
Q ss_pred ccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCccccccccccc
Q 001366 352 FLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFP 431 (1092)
Q Consensus 352 HrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (1092)
||||||+||+++.++.+||+|||+++.......
T Consensus 180 H~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~----------------------------------------------- 212 (334)
T 2pvf_A 180 HRDLAARNVLVTENNVMKIADFGLARDINNIDY----------------------------------------------- 212 (334)
T ss_dssp CSCCSGGGEEECTTCCEEECCCTTCEECTTTSS-----------------------------------------------
T ss_pred CCCCccceEEEcCCCCEEEcccccccccccccc-----------------------------------------------
Confidence 999999999999999999999999876441000
Q ss_pred CccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCc
Q 001366 432 SKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTT 511 (1092)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~ 511 (1092)
........+|+.|+|||++.+..++.
T Consensus 213 ------------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~ 238 (334)
T 2pvf_A 213 ------------------------------------------------------YKKTTNGRLPVKWMAPEALFDRVYTH 238 (334)
T ss_dssp ------------------------------------------------------EECCSCCCCCGGGCCHHHHHHCEECH
T ss_pred ------------------------------------------------------ccccCCCCcccceeChHHhcCCCcCh
Confidence 00001335678899999999888999
Q ss_pred cccchhhhHHHHHHcC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 512 SSNIYSLGVLFFELFG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 512 ~sDIwSLGvll~ell~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
++|||||||+||||++ + |.... .......+.....++.....++.+.+|+.+||+.+|.+||++.+++++
T Consensus 239 ~~Di~slG~il~ellt~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 312 (334)
T 2pvf_A 239 QSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312 (334)
T ss_dssp HHHHHHHHHHHHHHHTTSCCSSTTCC-HHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcCcCC-HHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999999999999998 4 33322 222223333333333444567889999999999999999999999985
No 308
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.6e-28 Score=308.92 Aligned_cols=253 Identities=19% Similarity=0.288 Sum_probs=213.9
Q ss_pred eeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECC--CCceEEEeeccCccEEEEEEecCC--CCEEEEEeCCCcEEE
Q 001366 823 VEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDAC--TGQTVSHYIEHEKRAWSVDFSQVH--PTKLASGSDDCSVKL 898 (1092)
Q Consensus 823 ~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~--tg~~i~~l~~h~~~V~sv~fsp~~--~~~laSgs~Dg~I~i 898 (1092)
...+|.+.|++++|+|+ +++|++|+.||+|+|||+. +++.+..+.+|...|++++|+| + +..|++|+.||+|++
T Consensus 4 ~l~gH~~~V~~l~~s~d-g~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~-~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 4 IANAHNELIHDAVLDYY-GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH-PKFGTILASCSYDGKVLI 81 (753)
T ss_dssp ----CCCCEEEECCCSS-SCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECC-TTSCSEEEEEETTSCEEE
T ss_pred ecccCcceeEEEEECCC-CCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecC-CCCCCEEEEEeCCCeEEE
Confidence 34579999999999998 8899999999999999998 4567888999999999999998 5 889999999999999
Q ss_pred EecCCCc--eeeeEe-cCCceEEEEEccC--CCeEEEEEECCCeEEEEEcCCCCc-ceEEecCCCCCeEEEEEcC-----
Q 001366 899 WNINEKN--SLATIK-NIANVCCVQFSAH--SSHLLAFGSADYRTYCYDLRNARA-PWCVLAGHEKAVSYVKFLD----- 967 (1092)
Q Consensus 899 WDl~~~~--~l~~l~-~~~~V~sl~fsp~--~~~~latgs~Dg~I~vwDlr~~~~-~~~~l~~H~~~V~~v~fs~----- 967 (1092)
||+.+++ .+..+. +...|.+++|+|+ + .++++|+.||.|++||+++... ....+.+|...|.+++|++
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~-~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCC-CEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccc
Confidence 9999886 455554 6789999999999 6 5999999999999999997632 3456778999999999986
Q ss_pred ---------CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecC---CCEEEEEecCCcEEEEeC
Q 001366 968 ---------SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTA---DGYIACGSESNEVYAYHR 1035 (1092)
Q Consensus 968 ---------~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spd---g~~lasgs~Dg~I~Iwd~ 1035 (1092)
+..|++|+.||+|++||++.... ...+...+.+|...|++++|+|+ +.+|++|+.||.|++||.
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~----~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ----TYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETTTT----EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEE
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCCcc----cceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecC
Confidence 67899999999999999985321 23566788899999999999999 899999999999999998
Q ss_pred CCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1036 SLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1036 ~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
..+....... ......|...|++++|+|++.+|++|+.||.|+||++
T Consensus 237 ~~~~~~~~~~---------~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~ 283 (753)
T 3jro_A 237 DNEQGPWKKT---------LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (753)
T ss_dssp SSSSSCCBCC---------BSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBC
T ss_pred CCCCCcceeE---------EeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEec
Confidence 7764321111 1122457788999999999999999999999999986
No 309
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.96 E-value=1.3e-29 Score=283.56 Aligned_cols=249 Identities=12% Similarity=0.042 Sum_probs=172.6
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.+ ++.|.||++... ..+..++.|+.......... .++...+... .|++++.++.........+
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~---~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~-- 82 (298)
T 1csn_A 12 YKVGRRIGEGSFGVIFEGTNL----LNNQQVAIKFEPRRSDAPQL---RDEYRTYKLLAGCTGIPNVYYFGQEGLHNV-- 82 (298)
T ss_dssp EEEEEEEEECSSCEEEEEEET----TTTEEEEEEEEECCTTSCCH---HHHHHHHHHTTTCTTCCCEEEEEEETTEEE--
T ss_pred eEEEEEEeecCCEEEEEEEEC----CCCcEEEEEEeccCCccHHH---HHHHHHHHHHhcCCCCCeEEeecCCCceeE--
Confidence 4444444 478999999841 12456666665332222221 2222333333 6788777665543322222
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc---
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ--- 367 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~--- 367 (1092)
++|||+ |++|.+++...+..++..+++.|+.||+.||.|||++||+||||||+||+++.++.
T Consensus 83 --------------lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~ 147 (298)
T 1csn_A 83 --------------LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNA 147 (298)
T ss_dssp --------------EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTT
T ss_pred --------------EEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCC
Confidence 379999 99999999887777899999999999999999999999999999999999987766
Q ss_pred --EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 368 --VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 368 --vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+||+|||+++.........
T Consensus 148 ~~~kl~Dfg~~~~~~~~~~~~----------------------------------------------------------- 168 (298)
T 1csn_A 148 NMIYVVDFGMVKFYRDPVTKQ----------------------------------------------------------- 168 (298)
T ss_dssp TCEEECCCTTCEESBCTTTCC-----------------------------------------------------------
T ss_pred CeEEEEECccccccccccccc-----------------------------------------------------------
Confidence 9999999998755211000
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL 525 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~el 525 (1092)
..+........||+.|+|||.+.+..++.++|||||||+||||
T Consensus 169 -------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el 211 (298)
T 1csn_A 169 -------------------------------------HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYF 211 (298)
T ss_dssp -------------------------------------BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------cccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHH
Confidence 0001112256799999999999999999999999999999999
Q ss_pred cCC---CCcH-----HHHHHHHHhccc-cCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 526 FGR---FDSE-----RALAAAMSDLRD-RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 526 l~~---f~~~-----~~~~~~~~~~~~-~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
+++ |... ......+..... ...+......++.+.+|+.+||+.||.+||++.+|++.
T Consensus 212 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~ 277 (298)
T 1csn_A 212 LRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL 277 (298)
T ss_dssp HHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred HcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 985 4331 111111111111 11112233557889999999999999999999999874
No 310
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.96 E-value=9.8e-30 Score=289.19 Aligned_cols=254 Identities=15% Similarity=0.092 Sum_probs=182.3
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ ++.|.||++.....-...+..++.|++... .........++..++...+|||++.++.........
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~---- 99 (327)
T 3lxl_A 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ---- 99 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC----
T ss_pred hhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC-CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc----
Confidence 4444444 478999998732111222455666655332 222233455677778888999999876654321110
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
. ..++|||++|++|.+++......++..+++.|+.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus 100 ---~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~ 169 (327)
T 3lxl_A 100 ---S-------LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIA 169 (327)
T ss_dssp ---E-------EEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEEC
T ss_pred ---e-------EEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEc
Confidence 0 113899999999999998755568888999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++........
T Consensus 170 Dfg~~~~~~~~~~~------------------------------------------------------------------ 183 (327)
T 3lxl_A 170 DFGLAKLLPLDKDY------------------------------------------------------------------ 183 (327)
T ss_dssp CGGGCEECCTTCSE------------------------------------------------------------------
T ss_pred ccccceecccCCcc------------------------------------------------------------------
Confidence 99998765411000
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCc
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS 531 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~ 531 (1092)
........||+.|+|||++.+..++.++|||||||++|||+++..+
T Consensus 184 ----------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p 229 (327)
T 3lxl_A 184 ----------------------------------YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDK 229 (327)
T ss_dssp ----------------------------------EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCG
T ss_pred ----------------------------------ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCC
Confidence 0001134678899999999998999999999999999999996322
Q ss_pred H---HHH--------------HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 532 E---RAL--------------AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 532 ~---~~~--------------~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
. ... ......+.....++.....++.+.+|+.+||++||.+|||+.+++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 297 (327)
T 3lxl_A 230 SCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ 297 (327)
T ss_dssp GGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 2 111 12222233333344455668889999999999999999999999875
No 311
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=1.3e-27 Score=270.21 Aligned_cols=276 Identities=13% Similarity=0.144 Sum_probs=223.9
Q ss_pred ccchhhhhhccccccCCCC--cEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCC-EEEEEeCCCcEE
Q 001366 728 DRENLFLAQQDQEIQNPTD--RLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDED-HFAAAGVSKKIK 804 (1092)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~--~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~-~latgg~D~~I~ 804 (1092)
.|.+.+.++.+ +|++ .+.++.|+.+++|++.......... .+..|...|++++|+|+++ +|++|+.|+.|+
T Consensus 9 ~h~~~v~~~~~----s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 9 APKDYISDIKI----IPSKSLLLITSWDGSLTVYKFDIQAKNVDLL--QSLRYKHPLLCCNFIDNTDLQIYVGTVQGEIL 82 (342)
T ss_dssp CCSSCEEEEEE----EGGGTEEEEEETTSEEEEEEEETTTTEEEEE--EEEECSSCEEEEEEEESSSEEEEEEETTSCEE
T ss_pred CCCCcEEEEEE----cCCCCEEEEEcCCCeEEEEEeCCCCccccce--eeeecCCceEEEEECCCCCcEEEEEcCCCeEE
Confidence 45555554433 3333 4577899999999987654111111 2347899999999999999 999999999999
Q ss_pred EEEc-CCCCCCCcccccceeeec--CCCCeEEEEEecCCCCEEEEEECCCcEEEEECCC---------CceEEEeeccCc
Q 001366 805 IFEF-NALFNDSVDVYYPAVEMS--NRSKLSCVCWNNYIKNYLASADYDGVVKLWDACT---------GQTVSHYIEHEK 872 (1092)
Q Consensus 805 Iwd~-~~~~~~~~~~~~~~~~~~--h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~t---------g~~i~~l~~h~~ 872 (1092)
+|++ .... .....+ |...|.+++|+| +.+|++++.|++|++||+.+ ++++..+. |..
T Consensus 83 ~wd~~~~~~--------~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~ 151 (342)
T 1yfq_A 83 KVDLIGSPS--------FQALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKN 151 (342)
T ss_dssp EECSSSSSS--------EEECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCC
T ss_pred EEEeccCCc--------eEeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCC
Confidence 9998 6521 133445 899999999999 78999999999999999987 76666666 889
Q ss_pred cEEEEEEecCCCCEEEEEeCCCcEEEEecCC-Ccee---eeEecCCceEEEEEcc-CCCeEEEEEECCCeEEEEEcCCC-
Q 001366 873 RAWSVDFSQVHPTKLASGSDDCSVKLWNINE-KNSL---ATIKNIANVCCVQFSA-HSSHLLAFGSADYRTYCYDLRNA- 946 (1092)
Q Consensus 873 ~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~-~~~l---~~l~~~~~V~sl~fsp-~~~~~latgs~Dg~I~vwDlr~~- 946 (1092)
.|.+++|+| +. +++++.|+.|++||+++ +... ....+...|.+++|+| ++. ++++|+.||.|++||++..
T Consensus 152 ~v~~~~~~~-~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~-~l~~~~~dg~i~i~~~~~~~ 227 (342)
T 1yfq_A 152 KIFTMDTNS-SR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE-GYACSSIDGRVAVEFFDDQG 227 (342)
T ss_dssp CEEEEEECS-SE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC-EEEEEETTSEEEEEECCTTC
T ss_pred ceEEEEecC-Cc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCC-EEEEEecCCcEEEEEEcCCC
Confidence 999999998 43 99999999999999998 5542 2223577899999999 885 8999999999999999876
Q ss_pred ----CcceEEecCCCC---------CeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCC-CCCeEE
Q 001366 947 ----RAPWCVLAGHEK---------AVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGH-TNEKNF 1011 (1092)
Q Consensus 947 ----~~~~~~l~~H~~---------~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h-~~~V~~ 1011 (1092)
......+.+|.. .|.+++|+ ++.+|++++.||.|++||+. .+.++..+.+| ...|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~--------~~~~~~~~~~~h~~~v~~ 299 (342)
T 1yfq_A 228 DDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ--------TRKKIKNFAKFNEDSVVK 299 (342)
T ss_dssp CSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT--------TTEEEEECCCCSSSEEEE
T ss_pred cccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCc--------cHhHhhhhhcccCCCceE
Confidence 356677888765 99999999 57789999999999999998 45678889988 999999
Q ss_pred EEEecCCCEEEEEecCCc-EEEEe
Q 001366 1012 VGLSTADGYIACGSESNE-VYAYH 1034 (1092)
Q Consensus 1012 v~~spdg~~lasgs~Dg~-I~Iwd 1034 (1092)
++ |++.+|++|+.||. .+.|.
T Consensus 300 ~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 300 IA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp EE--ECSSEEEEEEECTHHHHCSS
T ss_pred ec--CCCCeEEEEecCCccccccc
Confidence 99 99999999999998 55554
No 312
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.96 E-value=6.2e-30 Score=302.42 Aligned_cols=241 Identities=15% Similarity=0.114 Sum_probs=163.5
Q ss_pred ccccce-eeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCCC
Q 001366 220 LKGKGI-VCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 220 ~~g~Gv-v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
.+|.|. ||++... +..++.|+...... ....++..++... +||||+.++.....+...+
T Consensus 34 ~G~~G~V~~~~~~~------~~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~--------- 94 (432)
T 3p23_A 34 HGAEGTIVYRGMFD------NRDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQY--------- 94 (432)
T ss_dssp ECGGGCEEEEEESS------SSEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEE---------
T ss_pred cCcCEEEEEEEEeC------CeEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEE---------
Confidence 346675 5655542 44566655432211 2233455566666 8999999876654333333
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC-----CcEEEec
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS-----NQVKYIG 372 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~-----~~vkl~D 372 (1092)
++||||.| +|.+++..........+++.++.||+.||+|||++||+||||||+||||+.. ..+||+|
T Consensus 95 -------lv~E~~~g-~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~D 166 (432)
T 3p23_A 95 -------IAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISD 166 (432)
T ss_dssp -------EEEECCSE-EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECC
T ss_pred -------EEEECCCC-CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEec
Confidence 37999975 9999998776555555788999999999999999999999999999999532 3588999
Q ss_pred ccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCC
Q 001366 373 PIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIP 452 (1092)
Q Consensus 373 fg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 452 (1092)
||+++.+.....
T Consensus 167 FG~a~~~~~~~~-------------------------------------------------------------------- 178 (432)
T 3p23_A 167 FGLCKKLAVGRH-------------------------------------------------------------------- 178 (432)
T ss_dssp TTEEECC-------------------------------------------------------------------------
T ss_pred ccceeeccCCCc--------------------------------------------------------------------
Confidence 999977541000
Q ss_pred CCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC---CCCCccccchhhhHHHHHHcC-C
Q 001366 453 HSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---GVCTTSSNIYSLGVLFFELFG-R 528 (1092)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~---~~~t~~sDIwSLGvll~ell~-~ 528 (1092)
.....+..+||++|+|||++.+ ..++.++|||||||+||||++ +
T Consensus 179 --------------------------------~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g 226 (432)
T 3p23_A 179 --------------------------------SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEG 226 (432)
T ss_dssp ---------------------------------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTS
T ss_pred --------------------------------ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCC
Confidence 0001124679999999999984 567889999999999999998 4
Q ss_pred ---CCcHHHHHHHHHhccccCCCCC--CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 529 ---FDSERALAAAMSDLRDRILPPS--FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|....... ..........+.. ....++.+.+||.+||++||.+|||+.++|+||||...
T Consensus 227 ~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~ 290 (432)
T 3p23_A 227 SHPFGKSLQRQ-ANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290 (432)
T ss_dssp CBTTBSTTTHH-HHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred CCCcchhhHHH-HHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence 32221111 1111111111111 11123457799999999999999999999999999764
No 313
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.96 E-value=1.5e-29 Score=285.59 Aligned_cols=252 Identities=14% Similarity=0.143 Sum_probs=171.7
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCch-hhHhhhhhhhhhccCC--CCCCCccccceecCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNA--SPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 288 (1092)
|.+.+.+ +|.|.||++...+ +..++.|++....... ......++...+.... +||++.+++....+...+
T Consensus 30 y~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 30 YSILKQIGSGGSSKVFQVLNEK-----KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp EEEEEEEECCSSEEEEEEECTT-----CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred EEEEEEecCCCCEEEEEEEcCC-----CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 4444444 4789999997743 4556666553322222 2233344445555554 589998776655433322
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
.+|| +.|++|.+++...+ .++..+++.++.||+.||.|||++||+||||||+||+++ ++.+
T Consensus 105 ----------------lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~ 165 (313)
T 3cek_A 105 ----------------MVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGML 165 (313)
T ss_dssp ----------------EEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEE
T ss_pred ----------------EEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeE
Confidence 2677 78999999998764 577779999999999999999999999999999999995 5899
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++.......
T Consensus 166 kL~Dfg~~~~~~~~~~---------------------------------------------------------------- 181 (313)
T 3cek_A 166 KLIDFGIANQMQPDTT---------------------------------------------------------------- 181 (313)
T ss_dssp EECCCSSSCC----------------------------------------------------------------------
T ss_pred EEeeccccccccCccc----------------------------------------------------------------
Confidence 9999999876441000
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-----------CCCCccccchh
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-----------GVCTTSSNIYS 517 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----------~~~t~~sDIwS 517 (1092)
........||+.|+|||.+.+ ..++.++||||
T Consensus 182 -------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~s 224 (313)
T 3cek_A 182 -------------------------------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 224 (313)
T ss_dssp ---------------------------------------------CCGGGCCHHHHTTCC----------CCCHHHHHHH
T ss_pred -------------------------------------cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHH
Confidence 000114568999999999876 46899999999
Q ss_pred hhHHHHHHcCC---CCcHHH-HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 518 LGVLFFELFGR---FDSERA-LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 518 LGvll~ell~~---f~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
|||+||||+++ |..... .......+......+.....++.+.+|+.+||++||.+||++.|+|+||||.....
T Consensus 225 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 301 (313)
T 3cek_A 225 LGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 301 (313)
T ss_dssp HHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC--
T ss_pred HHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCCC
Confidence 99999999986 332211 11222222222212222233677899999999999999999999999999987543
No 314
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.4e-28 Score=274.80 Aligned_cols=265 Identities=11% Similarity=0.033 Sum_probs=201.8
Q ss_pred EcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECC-------
Q 001366 787 FDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDAC------- 859 (1092)
Q Consensus 787 fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~------- 859 (1092)
+.+++.+|++|+.|++|+|||+..... ..... ...|.++.|+|. +++++.|++|++|+..
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~--------~~~~~-~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~ 110 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKT--------ITTIT-TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILD 110 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSC--------EEEEE-EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcE--------EEEEe-cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEee
Confidence 446788999999999999999875211 01111 356777888874 9999999999999665
Q ss_pred --CCceEEEee-ccCccEEEEEEecC-CCCEEEEEeCCCcEEEEecCCCceeeeEe--cCCceEEEEEccCCCeEEEEEE
Q 001366 860 --TGQTVSHYI-EHEKRAWSVDFSQV-HPTKLASGSDDCSVKLWNINEKNSLATIK--NIANVCCVQFSAHSSHLLAFGS 933 (1092)
Q Consensus 860 --tg~~i~~l~-~h~~~V~sv~fsp~-~~~~laSgs~Dg~I~iWDl~~~~~l~~l~--~~~~V~sl~fsp~~~~~latgs 933 (1092)
+++.+..+. +|...|.+++|+|. ++.++++|+.|++|++||+++++++.... +...|.+++|+|++. +|++|+
T Consensus 111 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~-~lasg~ 189 (343)
T 3lrv_A 111 SKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL-LLALYS 189 (343)
T ss_dssp TTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC-EEEEEC
T ss_pred cCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCC-EEEEEc
Confidence 555555554 67788999999982 46899999999999999999999876664 455799999999985 999999
Q ss_pred CCCeEEEEEcCCCCcceEEecC-CCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeE-
Q 001366 934 ADYRTYCYDLRNARAPWCVLAG-HEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKN- 1010 (1092)
Q Consensus 934 ~Dg~I~vwDlr~~~~~~~~l~~-H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~- 1010 (1092)
.||.|++||+++++.....+.+ |...|.+++|+ ++.+|++++ |++|++||+++..... .+..+..|...+.
T Consensus 190 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~-----~~~~~~~~~~~~~~ 263 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTL-----AYPTYTIPEFKTGT 263 (343)
T ss_dssp TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCB-----SSCCCBC-----CC
T ss_pred CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcce-----eecccccccccccc
Confidence 9999999999998765467777 99999999999 667888888 5599999999643211 1222222434444
Q ss_pred -EEEEecCCCEEEEEec-CCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeC---CCCEEEEEecCCe
Q 001366 1011 -FVGLSTADGYIACGSE-SNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRR---RSDMVVAANSSGC 1085 (1092)
Q Consensus 1011 -~v~~spdg~~lasgs~-Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~sp---d~~~Lasgs~DG~ 1085 (1092)
+++|+|+|.+|++|+. |+.|+||+.......... ..+..++|.+ +...|++++.||.
T Consensus 264 ~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~l~~~~~d~~ 325 (343)
T 3lrv_A 264 VTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK------------------DEESALCLQSDTADFTDMDVVCGDGG 325 (343)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE------------------EEEEECCC----CCCCEEEEEEETTE
T ss_pred eEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe------------------cCceeEecCccccccceeEEEecCCc
Confidence 6999999999999998 999999998655433221 3467788888 8888888888888
Q ss_pred EEEE
Q 001366 1086 IKVL 1089 (1092)
Q Consensus 1086 V~vW 1089 (1092)
+.++
T Consensus 326 ~~~~ 329 (343)
T 3lrv_A 326 IAAI 329 (343)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 8776
No 315
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.96 E-value=1.5e-29 Score=286.69 Aligned_cols=246 Identities=16% Similarity=0.052 Sum_probs=178.3
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|.||++.....-...+..++.|++.............++..++...+|||++.++.....+....
T Consensus 41 ~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~----------- 109 (318)
T 3lxp_A 41 EGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS----------- 109 (318)
T ss_dssp ECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE-----------
T ss_pred CCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce-----------
Confidence 347899977643221223356677777654333333444566777888889999998776644321110
Q ss_pred ccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
..++|||++|++|.+++... .++..+++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++..
T Consensus 110 ---~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 110 ---LQLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp ---EEEEECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred ---EEEEEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccc
Confidence 01389999999999999766 3788899999999999999999999999999999999999999999999998775
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
......
T Consensus 185 ~~~~~~-------------------------------------------------------------------------- 190 (318)
T 3lxp_A 185 PEGHEY-------------------------------------------------------------------------- 190 (318)
T ss_dssp CTTCSE--------------------------------------------------------------------------
T ss_pred cccccc--------------------------------------------------------------------------
Confidence 411000
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcHH---H--
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSER---A-- 534 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~~---~-- 534 (1092)
........||..|+|||.+.+..++.++|||||||++|||+++..+.. .
T Consensus 191 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~ 244 (318)
T 3lxp_A 191 --------------------------YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF 244 (318)
T ss_dssp --------------------------EEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH
T ss_pred --------------------------cccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh
Confidence 000113457888999999999899999999999999999999632221 1
Q ss_pred ------------HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 535 ------------LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 535 ------------~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
.......+.....++.....++.+.+|+.+||++||.+|||+.++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 245 LELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp HHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 11122222333334445566789999999999999999999999986
No 316
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.96 E-value=5.3e-30 Score=296.18 Aligned_cols=259 Identities=11% Similarity=0.033 Sum_probs=175.2
Q ss_pred hHHHhhhcc--ccceeeeCCCCCcc-ccccccccccccccccCchhhHh----------hhhhhhhhccCCCCCCCcccc
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAF-KERRGMIDTKAFVTTTMPSDAAL----------KAAGAMMVASNASPKPVGVGT 279 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 279 (1092)
.|.+.+.++ |.|.||+|...+.- ...+..++.|+............ .+.+...+...+||||+.++.
T Consensus 36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~ 115 (364)
T 3op5_A 36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWG 115 (364)
T ss_dssp EEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEE
T ss_pred eEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEe
Confidence 355555554 78999999664321 11234555655433221111111 111222345668999998777
Q ss_pred ceecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCC
Q 001366 280 AVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSS 359 (1092)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~N 359 (1092)
........ .... .++|||| |++|.+++...+..++..+++.|+.||+.||+|||++||+||||||+|
T Consensus 116 ~~~~~~~~-----~~~~-------~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~N 182 (364)
T 3op5_A 116 SGLHDKNG-----KSYR-------FMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASN 182 (364)
T ss_dssp EEEEEETT-----EEEE-------EEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred eeeeccCC-----cceE-------EEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHH
Confidence 65542110 0001 1389999 999999998876778999999999999999999999999999999999
Q ss_pred eEEc--cCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCc
Q 001366 360 FKLL--QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNK 437 (1092)
Q Consensus 360 ill~--~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (1092)
|||+ .++.+||+|||+++.+........
T Consensus 183 ill~~~~~~~~kl~DFG~a~~~~~~~~~~~-------------------------------------------------- 212 (364)
T 3op5_A 183 LLLNYKNPDQVYLVDYGLAYRYCPEGVHKA-------------------------------------------------- 212 (364)
T ss_dssp EEEESSCTTCEEECCCTTCEESSGGGCCCC--------------------------------------------------
T ss_pred EEEecCCCCeEEEEECCcceecccCCcccc--------------------------------------------------
Confidence 9999 889999999999987552110000
Q ss_pred ccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchh
Q 001366 438 IETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYS 517 (1092)
Q Consensus 438 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwS 517 (1092)
..........||+.|+|||++.+..++.++||||
T Consensus 213 ----------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s 246 (364)
T 3op5_A 213 ----------------------------------------------YAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEI 246 (364)
T ss_dssp ----------------------------------------------SSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHH
T ss_pred ----------------------------------------------cccCcccccCCCCCccCHHHhCCCCCCchhhHHH
Confidence 0001112457999999999999999999999999
Q ss_pred hhHHHHHHcCC---CCcHHHHHHH---HH--------hccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 518 LGVLFFELFGR---FDSERALAAA---MS--------DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 518 LGvll~ell~~---f~~~~~~~~~---~~--------~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|||+||||+++ |......... .. .+....++ ....++.+.+|+.+||+.+|.+||++.+|++.
T Consensus 247 lG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~ 323 (364)
T 3op5_A 247 LGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDI 323 (364)
T ss_dssp HHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred HHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 99999999986 4321111111 00 00011111 13447889999999999999999999999873
No 317
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.2e-28 Score=286.35 Aligned_cols=293 Identities=9% Similarity=0.078 Sum_probs=222.9
Q ss_pred ccCCCCcE--EeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCccc
Q 001366 741 IQNPTDRL--GAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDV 818 (1092)
Q Consensus 741 ~~~~~~~l--~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~ 818 (1092)
.++|++.+ +++.|++++ +.... ..+.+|...|++++|+|+| .++++.+|+.....
T Consensus 22 ~~SpDG~~iASas~D~TV~--d~~~~--------~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~------ 78 (588)
T 2j04_A 22 TWARDGTLYLTTFPDISIG--QPKYA--------KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQNG------ 78 (588)
T ss_dssp EECTTSCEEEECSSSEEEE--EECCC--------SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSC------
T ss_pred EECCCCCEEEEEcCCceee--ccccc--------ceecCCCccEEEEEECCCC-------CcceEEEEeCCCce------
Confidence 46788865 567888888 31111 2346899999999999999 56777666643211
Q ss_pred ccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCc-----cEEEEEEecCCCCEEEEEeCC
Q 001366 819 YYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEK-----RAWSVDFSQVHPTKLASGSDD 893 (1092)
Q Consensus 819 ~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~-----~V~sv~fsp~~~~~laSgs~D 893 (1092)
.....|...|.+++|+|+ +.+||+++.||+|+|||... ++..+. |.. .|.+++|+| ++.+||+|+.|
T Consensus 79 ---~~~~~~~~~V~~vawSPd-G~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~D 150 (588)
T 2j04_A 79 ---LLNSQPVCYPRVCKPSPI-DDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNED 150 (588)
T ss_dssp ---SSTTSCSCCEEEEEECSS-SSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETT
T ss_pred ---EeecCCCCcEEEEEECCC-CCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCC
Confidence 112245788999999998 99999999999999999644 777777 765 499999999 99999999999
Q ss_pred CcEEEEecCCCce-------eeeEe-----cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCc--ceEEe-cCCCC
Q 001366 894 CSVKLWNINEKNS-------LATIK-----NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA--PWCVL-AGHEK 958 (1092)
Q Consensus 894 g~I~iWDl~~~~~-------l~~l~-----~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~--~~~~l-~~H~~ 958 (1092)
|+|+|||+.++.. +.++. |...|.+++|+|+| +++++.|+.|++||+.+... ...++ .+|..
T Consensus 151 GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~ 227 (588)
T 2j04_A 151 GELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRR 227 (588)
T ss_dssp SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSS
T ss_pred CEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecccccC
Confidence 9999999998753 56664 34589999999987 78899999999999987653 23456 58899
Q ss_pred CeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEE--ecCCCEEEEEecCCcEEEEeCC
Q 001366 959 AVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGL--STADGYIACGSESNEVYAYHRS 1036 (1092)
Q Consensus 959 ~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~--spdg~~lasgs~Dg~I~Iwd~~ 1036 (1092)
.|.+|+|+ ++.|++++ +++|++||+.. ........+|...|+.++| +|++..|+++++||+ ++|...
T Consensus 228 ~V~svaFs-g~~LASa~-~~tIkLWd~~~--------~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 228 KITDLKIV-DYKVVLTC-PGYVHKIDLKN--------YSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CCCCEEEE-TTEEEEEC-SSEEEEEETTT--------TEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred cEEEEEEE-CCEEEEEe-CCeEEEEECCC--------CeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 99999999 78999887 69999999983 2332233389999999999 999999999999999 999875
Q ss_pred CCCceeeeec------------cccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEec
Q 001366 1037 LPMPITSYKF------------GSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANS 1082 (1092)
Q Consensus 1037 ~~~~i~~~~~------------~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~ 1082 (1092)
. +. +.- .-++........-.+...|++|+|+|||++||+++.
T Consensus 297 ~---~~-~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 297 E---LH-VTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp S---EE-EECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEE
T ss_pred c---EE-ECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEEe
Confidence 1 22 110 011111111111223456999999999999999874
No 318
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.96 E-value=1.9e-29 Score=283.27 Aligned_cols=255 Identities=14% Similarity=0.116 Sum_probs=180.4
Q ss_pred HHHhhhc--cccceeeeCCCCCcccccccccccccccccc---CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTT---MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
|.+...+ +|.|.||++.... .+..++.|++.... .........++..++...+|||++.+++........
T Consensus 7 y~i~~~lg~G~~g~V~~~~~~~----~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~- 81 (305)
T 2wtk_C 7 YLMGDLLGEGSYGKVKEVLDSE----TLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQ- 81 (305)
T ss_dssp BCCCCEEEECSSCEEEEEEBTT----TCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC----
T ss_pred eeEeeEEecCCCeEEEEEEECC----CCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCC-
Confidence 4444444 4789999997632 24455555543221 112234455667778888999999877664321110
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~ 367 (1092)
. ...+|||++|+ |.+++.. ....++..+++.++.||+.||+|||++||+||||||+||+++.++.
T Consensus 82 ------~-------~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~ 147 (305)
T 2wtk_C 82 ------K-------MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGT 147 (305)
T ss_dssp ------C-------EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC
T ss_pred ------e-------EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCc
Confidence 0 11379999987 8888765 3446888899999999999999999999999999999999999999
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+|++|||+++.......
T Consensus 148 ~kl~dfg~~~~~~~~~~--------------------------------------------------------------- 164 (305)
T 2wtk_C 148 LKISALGVAEALHPFAA--------------------------------------------------------------- 164 (305)
T ss_dssp EEECCCTTCEECCTTCS---------------------------------------------------------------
T ss_pred EEeeccccccccCcccc---------------------------------------------------------------
Confidence 99999998876431000
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC--CCccccchhhhHHHHHH
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV--CTTSSNIYSLGVLFFEL 525 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~--~t~~sDIwSLGvll~el 525 (1092)
........||+.|+|||++.+.. ++.++|||||||++|||
T Consensus 165 --------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l 206 (305)
T 2wtk_C 165 --------------------------------------DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNI 206 (305)
T ss_dssp --------------------------------------SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHH
T ss_pred --------------------------------------ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHH
Confidence 00011346899999999998744 48899999999999999
Q ss_pred cCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 526 FGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 526 l~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
+++ |........ +..+.... ++.....++.+.+|+.+||++||.+|||+.++++||||.....
T Consensus 207 ~~g~~p~~~~~~~~~-~~~i~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 207 TTGLYPFEGDNIYKL-FENIGKGS-YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp HHSSCSCCCSSHHHH-HHHHHHCC-CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred HhCCCCCCCchHHHH-HHHHhcCC-CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 985 544332222 22222211 1222345788999999999999999999999999999987544
No 319
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.96 E-value=1.3e-29 Score=310.09 Aligned_cols=266 Identities=19% Similarity=0.148 Sum_probs=183.4
Q ss_pred CCchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCC
Q 001366 209 SGFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGS 286 (1092)
Q Consensus 209 ~~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (1092)
..+..|.+...++ |.|.||++... ..+..++.|+..............++..++...+||||+.++........
T Consensus 11 ~~~grY~i~~~LG~G~fG~Vyla~~~----~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~ 86 (676)
T 3qa8_A 11 QTCGPWEMKERLGTGGFGYVLRWIHQ----DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQK 86 (676)
T ss_dssp ------CCCCCCCBCSSSBCCCCCCT----TTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCC
T ss_pred CCCCCeEEEEEEeeCCCeEEEEEEEC----CCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeeccccc
Confidence 3445677777665 78999999873 23566777766443333334445567778888899999986555321110
Q ss_pred CCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc
Q 001366 287 LDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH--KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ 364 (1092)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~--~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~ 364 (1092)
.. .... ..++||||+|++|.+++..... .++..+++.|+.||+.||+|||++||+||||||+||+++.
T Consensus 87 ~~---~~~~-------~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~ 156 (676)
T 3qa8_A 87 LA---PNDL-------PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQP 156 (676)
T ss_dssp CC---TTSS-------CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEEC
T ss_pred cc---CCCe-------EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeec
Confidence 00 0111 2248999999999999976442 5777799999999999999999999999999999999997
Q ss_pred CCc---EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 365 SNQ---VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 365 ~~~---vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
++. +|++|||+++......
T Consensus 157 ~g~~~~vKL~DFG~a~~~~~~~---------------------------------------------------------- 178 (676)
T 3qa8_A 157 GPQRLIHKIIDLGYAKELDQGE---------------------------------------------------------- 178 (676)
T ss_dssp CSSSCEEEECSCCCCCBTTSCC----------------------------------------------------------
T ss_pred CCCceeEEEccccccccccccc----------------------------------------------------------
Confidence 765 9999999887643100
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHH
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVL 521 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvl 521 (1092)
......||+.|+|||.+.+..++.++|||||||+
T Consensus 179 ----------------------------------------------~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGvi 212 (676)
T 3qa8_A 179 ----------------------------------------------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTL 212 (676)
T ss_dssp ----------------------------------------------CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCcccCChHHhccCCCCchhHHHHHHHH
Confidence 0114578999999999999999999999999999
Q ss_pred HHHHcCC---CCcHHHHHHHHHhcc--------------cc-----CC--CCCCC-CCChhHHHHHHhccccCCCCCCCH
Q 001366 522 FFELFGR---FDSERALAAAMSDLR--------------DR-----IL--PPSFL-SENPKEAGFCLWQLHPEPLSRPTT 576 (1092)
Q Consensus 522 l~ell~~---f~~~~~~~~~~~~~~--------------~~-----~~--p~~~~-~~~~~~~~li~~lL~~dP~~Rpsa 576 (1092)
||||+++ |.+......+...+. .. .+ |..+. ..++.+.+|+.+||.+||.+|||+
T Consensus 213 LyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa 292 (676)
T 3qa8_A 213 AFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTD 292 (676)
T ss_dssp HHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CC
T ss_pred HHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCH
Confidence 9999986 433222222111110 00 00 11111 134668899999999999999999
Q ss_pred HHHhhhhhhhhhhccc
Q 001366 577 REILQSEVTNEFQEVC 592 (1092)
Q Consensus 577 ~eiL~~~~~~~~~~~~ 592 (1092)
.++|+||||.+.....
T Consensus 293 ~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 293 PQNPNVGCFQALDSIL 308 (676)
T ss_dssp TTCCCCTTHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHH
Confidence 9999999998865443
No 320
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.96 E-value=6.1e-30 Score=290.10 Aligned_cols=241 Identities=18% Similarity=0.103 Sum_probs=172.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|.||+|...+ +..++.|+...... .......++...+...+|||++.++.....+...+
T Consensus 49 ~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~----------- 111 (321)
T 2qkw_B 49 HGVFGKVYKGVLRD-----GAKVALKRRTPESS-QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI----------- 111 (321)
T ss_dssp BCSSSEEEEEECTT-----CCEEEEEECCSCCS-SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCE-----------
T ss_pred cCCCeeEEEEEECC-----CCEEEEEEecccCh-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE-----------
Confidence 34789999998643 45556665433222 22334456677788889999998776543322222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARG---HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~---~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
.+|||++|++|.+++.... ..++..+++.++.||+.||+|||++||+||||||+||+++.++.+|++|||++
T Consensus 112 -----lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 112 -----LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp -----EEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred -----EEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 3899999999999996543 24788899999999999999999999999999999999999999999999998
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.......
T Consensus 187 ~~~~~~~~------------------------------------------------------------------------ 194 (321)
T 2qkw_B 187 KKGTELDQ------------------------------------------------------------------------ 194 (321)
T ss_dssp EECSSSSC------------------------------------------------------------------------
T ss_pred cccccccc------------------------------------------------------------------------
Confidence 76331000
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CCcHH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FDSER 533 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~~~~ 533 (1092)
........||+.|+|||++.+..++.++|||||||+||||+++ |....
T Consensus 195 -----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~ 245 (321)
T 2qkw_B 195 -----------------------------THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL 245 (321)
T ss_dssp -----------------------------CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSS
T ss_pred -----------------------------cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccC
Confidence 0001145689999999999999999999999999999999986 32210
Q ss_pred -----HHHHH--HHhcc---ccCCCCCCC-----CCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 534 -----ALAAA--MSDLR---DRILPPSFL-----SENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 534 -----~~~~~--~~~~~---~~~~p~~~~-----~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
....+ ..... .....+... ...+.+.+|+.+||++||.+|||+.|++++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 310 (321)
T 2qkw_B 246 PREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310 (321)
T ss_dssp SSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 00000 00000 111111111 1234578999999999999999999999875
No 321
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.96 E-value=1.1e-29 Score=282.95 Aligned_cols=252 Identities=12% Similarity=0.022 Sum_probs=176.0
Q ss_pred hHHHhhhcc--ccceeeeCCCCCcccccccccccccccccc--CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTT--MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
.|.+.+.++ |.|.||+|........ ...++.|++.... .........++...+...+|||++.++.....+. .
T Consensus 19 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~- 95 (291)
T 1u46_A 19 DLRLLEKLGDGSFGVVRRGEWDAPSGK-TVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M- 95 (291)
T ss_dssp GEEEEEECC----CCCEEEEEECTTSC-EEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C-
T ss_pred HeeeeeeecCCCceeEEEEEeccCCCc-eeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c-
Confidence 455554444 6899999874211000 1234445443221 1222334456666777889999998776644221 1
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
..+|+|+.|++|.+++......++..+++.++.||+.||.|||++||+||||||+||+++.++.+
T Consensus 96 ---------------~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~ 160 (291)
T 1u46_A 96 ---------------KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLV 160 (291)
T ss_dssp ---------------EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEE
T ss_pred ---------------eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCE
Confidence 13799999999999998765568888999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
|++|||+++........
T Consensus 161 kl~Dfg~~~~~~~~~~~--------------------------------------------------------------- 177 (291)
T 1u46_A 161 KIGDFGLMRALPQNDDH--------------------------------------------------------------- 177 (291)
T ss_dssp EECCCTTCEECCC-CCE---------------------------------------------------------------
T ss_pred EEccccccccccccccc---------------------------------------------------------------
Confidence 99999998765411000
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG- 527 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~- 527 (1092)
........+|..|+|||++.+..++.++|||||||++|||++
T Consensus 178 -------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~ 220 (291)
T 1u46_A 178 -------------------------------------YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 220 (291)
T ss_dssp -------------------------------------EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------------hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhC
Confidence 000013457788999999998889999999999999999998
Q ss_pred C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 528 R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 528 ~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
+ |..................++.....++.+.+|+.+||++||.+|||+.+++++
T Consensus 221 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 278 (291)
T 1u46_A 221 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF 278 (291)
T ss_dssp SCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 5 433333333333333333344445667889999999999999999999999974
No 322
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.96 E-value=1.8e-29 Score=285.31 Aligned_cols=248 Identities=16% Similarity=0.073 Sum_probs=172.2
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccc-cCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTT-TMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
+|.+...++ |.|.||+|...+ .++.|++... ..........++..++...+|||++.++.........+
T Consensus 34 ~~~~~~~lg~G~~g~V~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~- 105 (319)
T 2y4i_B 34 QLEIGELIGKGRFGQVYHGRWHG-------EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA- 105 (319)
T ss_dssp CEECCCBCCCSSSSEEEEEEESS-------SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEE-
T ss_pred HeEEeeEeccCCceEEEEEEEcC-------eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceE-
Confidence 344444443 679999997632 2344443221 11222233445666778889999998777655333222
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
++|||++|++|.+++...+..++..+++.++.||+.||.|||++||+||||||+||+++ ++.+|
T Consensus 106 ---------------iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~ 169 (319)
T 2y4i_B 106 ---------------IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVV 169 (319)
T ss_dssp ---------------EECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCE
T ss_pred ---------------EEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEE
Confidence 38999999999999988776788889999999999999999999999999999999997 78999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
++|||+++........
T Consensus 170 l~Dfg~~~~~~~~~~~---------------------------------------------------------------- 185 (319)
T 2y4i_B 170 ITDFGLFSISGVLQAG---------------------------------------------------------------- 185 (319)
T ss_dssp ECCCSCCC------------------------------------------------------------------------
T ss_pred EeecCCcccccccccc----------------------------------------------------------------
Confidence 9999988654310000
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC---------CCCCccccchhhhH
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG---------GVCTTSSNIYSLGV 520 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~---------~~~t~~sDIwSLGv 520 (1092)
..........||+.|+|||.+.+ ..++.++|||||||
T Consensus 186 ----------------------------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~ 231 (319)
T 2y4i_B 186 ----------------------------------RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGT 231 (319)
T ss_dssp ------------------------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHH
T ss_pred ----------------------------------ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHH
Confidence 00011124568999999999875 45799999999999
Q ss_pred HHHHHcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 521 LFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 521 ll~ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
++|||+++ |..................+......++.+.+|+.+||++||.+|||+.++++.
T Consensus 232 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~ 296 (319)
T 2y4i_B 232 IWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDM 296 (319)
T ss_dssp HHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 99999986 443333222222222222222223457889999999999999999999999873
No 323
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.96 E-value=4.3e-30 Score=294.72 Aligned_cols=258 Identities=15% Similarity=0.076 Sum_probs=173.0
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhH----------hhhhhhhhhccCCCCCCCccccc
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAA----------LKAAGAMMVASNASPKPVGVGTA 280 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 280 (1092)
.|.+.+.++ |.|.||++..... ...+..++.|+........... ...++...+....|||++.++..
T Consensus 38 ~y~~~~~lg~G~~g~Vy~~~~~~~-~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 38 QWVLGKKIGSGGFGLIYLAFPTNK-PEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp EEEEEEEC------CEEEEEESSS-CGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred eEEEEeeEeecCCeEEEEEEecCC-CCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 355555554 7899999987421 1123444555443322111111 12233445667799999988776
Q ss_pred eecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCe
Q 001366 281 VVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSF 360 (1092)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Ni 360 (1092)
....... .... .++|||+ |++|.+++...+ .++..+++.|+.||+.||+|||++||+||||||+||
T Consensus 117 ~~~~~~~-----~~~~-------~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI 182 (345)
T 2v62_A 117 GLTEFKG-----RSYR-------FMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANL 182 (345)
T ss_dssp EEEESSS-----CEEE-------EEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred cccccCC-----CcEE-------EEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHE
Confidence 5541100 0001 1389999 999999997765 678889999999999999999999999999999999
Q ss_pred EEccCC--cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcc
Q 001366 361 KLLQSN--QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKI 438 (1092)
Q Consensus 361 ll~~~~--~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (1092)
|++.++ .+||+|||+++.+.......
T Consensus 183 ll~~~~~~~~kL~Dfg~a~~~~~~~~~~---------------------------------------------------- 210 (345)
T 2v62_A 183 LLGYKNPDQVYLADYGLSYRYCPNGNHK---------------------------------------------------- 210 (345)
T ss_dssp EEESSSTTSEEECCCTTCEESSGGGCCC----------------------------------------------------
T ss_pred EEccCCCCcEEEEeCCCceecccccccc----------------------------------------------------
Confidence 999887 99999999998755211000
Q ss_pred cccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhh
Q 001366 439 ETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSL 518 (1092)
Q Consensus 439 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSL 518 (1092)
...........||+.|+|||++.+..++.++|||||
T Consensus 211 --------------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 246 (345)
T 2v62_A 211 --------------------------------------------QYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEIL 246 (345)
T ss_dssp --------------------------------------------CCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHH
T ss_pred --------------------------------------------cchhccccccCCCccccCHHHhcCCCCCchhhHHHH
Confidence 000011125679999999999999999999999999
Q ss_pred hHHHHHHcCC---CCcH----HHHHHHHHhccccCCCCC------CCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 519 GVLFFELFGR---FDSE----RALAAAMSDLRDRILPPS------FLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 519 Gvll~ell~~---f~~~----~~~~~~~~~~~~~~~p~~------~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
||+||||+++ |... ............ .+|+. ....++.+.+|+.+||.+||.+||++.+|++.
T Consensus 247 G~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 322 (345)
T 2v62_A 247 GYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLD-ELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKI 322 (345)
T ss_dssp HHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHH-TTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred HHHHHHHHhCCCCccccccccHHHHHHHHhhcc-cccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence 9999999986 4221 111111111111 12211 11557889999999999999999999999874
No 324
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.96 E-value=2.4e-29 Score=310.13 Aligned_cols=243 Identities=14% Similarity=0.056 Sum_probs=178.0
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
..++.|.||+|.... ...+..++.|+..............++..++...+||||+.++.....+. .+
T Consensus 345 G~G~fG~Vy~~~~~~--~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~-~~---------- 411 (613)
T 2ozo_A 345 GCGNFGSVRQGVYRM--RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LM---------- 411 (613)
T ss_dssp EECSSSEEEEEEEEC--SSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSS-EE----------
T ss_pred ecCCCcEEEEEEEec--CCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCC-eE----------
Confidence 556899999996521 11134456666544333334455667788888999999998876643221 11
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
++||||+||+|.++|......++..+++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++.
T Consensus 412 ------lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~ 485 (613)
T 2ozo_A 412 ------LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKA 485 (613)
T ss_dssp ------EEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTT
T ss_pred ------EEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCccc
Confidence 38999999999999987767788989999999999999999999999999999999999999999999999987
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
+......
T Consensus 486 ~~~~~~~------------------------------------------------------------------------- 492 (613)
T 2ozo_A 486 LGADDSY------------------------------------------------------------------------- 492 (613)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ccCCCce-------------------------------------------------------------------------
Confidence 5411000
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~ 534 (1092)
........+|..|+|||++.+..++.++|||||||+||||++ + |.....
T Consensus 493 ---------------------------~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~ 545 (613)
T 2ozo_A 493 ---------------------------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG 545 (613)
T ss_dssp ------------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS
T ss_pred ---------------------------eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH
Confidence 000012345678999999998999999999999999999997 5 433222
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
.. .+..+.....++.....++.+.+|+.+||+.+|.+||++.+|++
T Consensus 546 ~~-~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 591 (613)
T 2ozo_A 546 PE-VMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 591 (613)
T ss_dssp HH-HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred HH-HHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 22 22222222223333456789999999999999999999999865
No 325
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.96 E-value=1.6e-29 Score=281.55 Aligned_cols=238 Identities=16% Similarity=0.096 Sum_probs=176.4
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCcc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASC 299 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (1092)
.+|.|.||++... ..+..++.|++... ........++..++...+|||++.++.....+...+
T Consensus 23 ~G~~g~V~~~~~~----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~----------- 85 (288)
T 3kfa_A 23 GGQYGEVYEGVWK----KYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY----------- 85 (288)
T ss_dssp GGTTCSEEEEEEG----GGTEEEEEEEECSC--STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE-----------
T ss_pred CCCceeEEEeEec----CCCEEEEEEecCcC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE-----------
Confidence 3478999999863 23445566555322 223344456677788889999998777644332222
Q ss_pred ccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 300 WIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 300 ~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
.+|||++|++|.+++.... ..++..+++.++.||+.||+|||++||+||||||+||+++.++.+|++|||+++.
T Consensus 86 -----~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~ 160 (288)
T 3kfa_A 86 -----IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160 (288)
T ss_dssp -----EEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGT
T ss_pred -----EEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCcccee
Confidence 3899999999999997643 4588889999999999999999999999999999999999999999999999876
Q ss_pred ccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCc
Q 001366 379 TLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDT 458 (1092)
Q Consensus 379 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 458 (1092)
.....
T Consensus 161 ~~~~~--------------------------------------------------------------------------- 165 (288)
T 3kfa_A 161 MTGDT--------------------------------------------------------------------------- 165 (288)
T ss_dssp SCSSS---------------------------------------------------------------------------
T ss_pred ccCCc---------------------------------------------------------------------------
Confidence 43100
Q ss_pred ccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHHH
Q 001366 459 NEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSERA 534 (1092)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~~ 534 (1092)
........+|+.|+|||.+.+..++.++|||||||++|+|++ + |....
T Consensus 166 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~- 217 (288)
T 3kfa_A 166 ---------------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID- 217 (288)
T ss_dssp ---------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-
T ss_pred ---------------------------cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-
Confidence 000113456788999999999999999999999999999998 5 32211
Q ss_pred HHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 535 LAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 535 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
.......+.....++.....++.+.+|+.+||++||.+|||+.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~ 265 (288)
T 3kfa_A 218 LSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 265 (288)
T ss_dssp GGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHH
Confidence 111222222222333344567889999999999999999999999873
No 326
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.96 E-value=7.3e-30 Score=292.45 Aligned_cols=247 Identities=14% Similarity=0.117 Sum_probs=165.5
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCC------CCccccceecC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPK------PVGVGTAVVSN 284 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 284 (1092)
.|.+.+.++ +.|.||++.... .. +..++.|++... ........++...+...+|++ ++.+.+.....
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~~--~~-~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 20 RYEIVGNLGEGTFGKVVECLDHA--RG-KSQVALKIIRNV--GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp TEEEEEEEEEETTEEEEEEEETT--TT-TEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred cEEEEEEeeccCCeEEEEEEecC--CC-ceEEEEEEEccc--ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 355555554 789999997521 00 235566665321 112222333444444444443 33222222211
Q ss_pred CCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE-
Q 001366 285 GSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL- 362 (1092)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill- 362 (1092)
.. ..++|||+ +++|.+++.... ..++..+++.|+.||+.||+|||++||+||||||+|||+
T Consensus 95 ~~----------------~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~ 157 (355)
T 2eu9_A 95 GH----------------MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFV 157 (355)
T ss_dssp TE----------------EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEES
T ss_pred Ce----------------EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe
Confidence 11 12479999 667777775543 568888999999999999999999999999999999999
Q ss_pred ------------------ccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccc
Q 001366 363 ------------------LQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFS 424 (1092)
Q Consensus 363 ------------------~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (1092)
+..+.+||+|||+++....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~------------------------------------------- 194 (355)
T 2eu9_A 158 NSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE------------------------------------------- 194 (355)
T ss_dssp CCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS-------------------------------------------
T ss_pred cccccccccccccccccccCCCcEEEeecCccccccc-------------------------------------------
Confidence 5677899999988765220
Q ss_pred cccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccc
Q 001366 425 RWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL 504 (1092)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l 504 (1092)
......||+.|+|||++
T Consensus 195 ---------------------------------------------------------------~~~~~~gt~~y~aPE~~ 211 (355)
T 2eu9_A 195 ---------------------------------------------------------------HHTTIVATRHYRPPEVI 211 (355)
T ss_dssp ---------------------------------------------------------------CCCSSCSCGGGCCHHHH
T ss_pred ---------------------------------------------------------------cccCCcCCCcccCCeee
Confidence 00135689999999999
Q ss_pred cCCCCCccccchhhhHHHHHHcCC---CCcHHHH--HHHHHhccccCCCC------------------------------
Q 001366 505 SGGVCTTSSNIYSLGVLFFELFGR---FDSERAL--AAAMSDLRDRILPP------------------------------ 549 (1092)
Q Consensus 505 ~~~~~t~~sDIwSLGvll~ell~~---f~~~~~~--~~~~~~~~~~~~p~------------------------------ 549 (1092)
.+..++.++|||||||+||||+++ |...... ...+..... .+|.
T Consensus 212 ~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (355)
T 2eu9_A 212 LELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVK 290 (355)
T ss_dssp TTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC-CCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHH
T ss_pred ecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC-CCcHHHhhhccchhhhcccccccccccchhcccc
Confidence 999999999999999999999986 4433222 122222111 1110
Q ss_pred -----------CCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 550 -----------SFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 550 -----------~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
.....++.+.+|+.+||++||.+|||+.|+|+||||...
T Consensus 291 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 340 (355)
T 2eu9_A 291 ENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340 (355)
T ss_dssp HHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred ccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCC
Confidence 001113467899999999999999999999999999875
No 327
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.96 E-value=2.5e-29 Score=283.54 Aligned_cols=240 Identities=17% Similarity=0.208 Sum_probs=173.4
Q ss_pred CchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 210 GFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 210 ~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
.+.+|.+.+.++ |.|.||++... +..++.|+... ........++...+...+|||++.++.... + .
T Consensus 6 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~vavK~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-~-~- 73 (307)
T 2eva_A 6 DYKEIEVEEVVGRGAFGVVCKAKWR------AKDVAIKQIES---ESERKAFIVELRQLSRVNHPNIVKLYGACL-N-P- 73 (307)
T ss_dssp CGGGEEEEEEEECCSSSEEEEEEET------TEEEEEEECSS---TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT-T-T-
T ss_pred CHhHeeeeeEeecCCCceEEEEEEC------CeeEEEEEecC---hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc-C-C-
Confidence 344555555544 78999999763 23455555422 122334455667788889999998765422 1 1
Q ss_pred CCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHhhh---cCccccCCCCCCeEE
Q 001366 288 DLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH--KGKRIECLYIFRQIVALVDYHHT---QGVTFLDLKPSSFKL 362 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~--~~~~~~~~~i~~qil~~l~~lHs---~gIvHrDLKP~Nill 362 (1092)
..++|||++|++|.+++..... .++..+++.++.||+.||+|||+ +||+||||||+||++
T Consensus 74 ---------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll 138 (307)
T 2eva_A 74 ---------------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL 138 (307)
T ss_dssp ---------------TEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEE
T ss_pred ---------------cEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEE
Confidence 1138999999999999976543 36777899999999999999999 899999999999999
Q ss_pred ccCCc-EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 363 LQSNQ-VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 363 ~~~~~-vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
+.++. +|++|||+++.....
T Consensus 139 ~~~~~~~kl~Dfg~~~~~~~~----------------------------------------------------------- 159 (307)
T 2eva_A 139 VAGGTVLKICDFGTACDIQTH----------------------------------------------------------- 159 (307)
T ss_dssp ETTTTEEEECCCCC------------------------------------------------------------------
T ss_pred eCCCCEEEEcccccccccccc-----------------------------------------------------------
Confidence 98886 799999988653310
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHH
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVL 521 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvl 521 (1092)
.....||+.|+|||++.+..++.++|||||||+
T Consensus 160 -----------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 192 (307)
T 2eva_A 160 -----------------------------------------------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGII 192 (307)
T ss_dssp ----------------------------------------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHH
T ss_pred -----------------------------------------------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHH
Confidence 013358999999999999999999999999999
Q ss_pred HHHHcCC---CCcH-HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 522 FFELFGR---FDSE-RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 522 l~ell~~---f~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
+|||+++ |... ......+........++.....++.+.+|+.+||+.||.+|||+.+++++
T Consensus 193 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 257 (307)
T 2eva_A 193 LWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI 257 (307)
T ss_dssp HHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 9999986 3321 11222222333334455555678889999999999999999999999884
No 328
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.96 E-value=1.8e-29 Score=300.75 Aligned_cols=243 Identities=15% Similarity=0.106 Sum_probs=178.2
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+.+.+ ++.|.||+|...+ +..++.|+..... .......++..++...+|||++.++.... +...+
T Consensus 189 ~~~~~~~lG~G~fg~V~~~~~~~-----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~-- 258 (454)
T 1qcf_A 189 SLKLEKKLGAGQFGEVWMATYNK-----HTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIY-- 258 (454)
T ss_dssp GEEEEEEEECCSSEEEEEEEETT-----TEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE--
T ss_pred HeEEEEEcccCCceEEEEEEECC-----ccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccE--
Confidence 34444444 4789999998743 3445655543222 23344556777888899999998765432 11111
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
++|||+.||+|.++|+.. +..++..+++.++.||+.||+|||++||+||||||+||||+.++.+|
T Consensus 259 --------------lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~k 324 (454)
T 1qcf_A 259 --------------IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCK 324 (454)
T ss_dssp --------------EEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEE
T ss_pred --------------EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEE
Confidence 389999999999999754 23577778999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+++.......
T Consensus 325 l~DFG~a~~~~~~~~----------------------------------------------------------------- 339 (454)
T 1qcf_A 325 IADFGLARVIEDNEY----------------------------------------------------------------- 339 (454)
T ss_dssp ECSTTGGGGBCCHHH-----------------------------------------------------------------
T ss_pred EeeCCCceEcCCCce-----------------------------------------------------------------
Confidence 999999976441000
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~ 528 (1092)
.......+|..|+|||++.+..++.++|||||||+||||++ +
T Consensus 340 -------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g 382 (454)
T 1qcf_A 340 -------------------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 382 (454)
T ss_dssp -------------------------------------HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred -------------------------------------eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCC
Confidence 00012345678999999998899999999999999999998 4
Q ss_pred ---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|........ +..+.....++.....++.+.+|+.+||++||.+|||+.+|+..
T Consensus 383 ~~P~~~~~~~~~-~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~ 438 (454)
T 1qcf_A 383 RIPYPGMSNPEV-IRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSV 438 (454)
T ss_dssp CCSSTTCCHHHH-HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCCHHHH-HHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 443322222 22222223333344567889999999999999999999999863
No 329
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.96 E-value=7.1e-30 Score=289.71 Aligned_cols=243 Identities=16% Similarity=0.185 Sum_probs=174.2
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCch-----hhHhhhhhhhhhccC--CCCCCCccccceec
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-----DAALKAAGAMMVASN--ASPKPVGVGTAVVS 283 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 283 (1092)
+|.+.+.++ |.|.||+|... ..+..++.|++....... ......++..++... .|||++.+++....
T Consensus 44 ~y~~~~~lg~G~~g~Vy~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 44 QYQVGPLLGSGGFGSVYSGIRV----SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp TEEEEEECSSSSSCEEEEEEET----TTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred ceEEEEEEeeCCCeEEEEEEEC----CCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 355554444 78999999642 124555665543222111 111222333344444 46999987766543
Q ss_pred CCCCCCCccCCCCCccccCCCcccccCCC-CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE
Q 001366 284 NGSLDLGARTGVPASCWIGGLRQGSSDHG-VNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL 362 (1092)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-gsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill 362 (1092)
....+ .+|+++.+ ++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+|||+
T Consensus 120 ~~~~~----------------lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll 182 (320)
T 3a99_A 120 PDSFV----------------LILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 182 (320)
T ss_dssp SSEEE----------------EEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred CCcEE----------------EEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEE
Confidence 33222 37899876 99999998754 47777999999999999999999999999999999999
Q ss_pred c-cCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 363 L-QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 363 ~-~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
+ ..+.+||+|||+++.....
T Consensus 183 ~~~~~~~kL~Dfg~~~~~~~~----------------------------------------------------------- 203 (320)
T 3a99_A 183 DLNRGELKLIDFGSGALLKDT----------------------------------------------------------- 203 (320)
T ss_dssp ETTTTEEEECCCTTCEECCSS-----------------------------------------------------------
T ss_pred eCCCCCEEEeeCccccccccc-----------------------------------------------------------
Confidence 9 6799999999988764310
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC-CccccchhhhH
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIYSLGV 520 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-t~~sDIwSLGv 520 (1092)
......||+.|+|||++.+..+ +.++|||||||
T Consensus 204 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~ 237 (320)
T 3a99_A 204 ----------------------------------------------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 237 (320)
T ss_dssp ----------------------------------------------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHH
T ss_pred ----------------------------------------------cccCCCCCccCCChHHhccCCCCCccchHHhHHH
Confidence 0113468999999999987665 78999999999
Q ss_pred HHHHHcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 521 LFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 521 ll~ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
+||||+++ |..... ... .... .....++.+.+|+.+||+.||.+|||+.+|++||||.+..
T Consensus 238 il~el~~g~~pf~~~~~---~~~---~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 301 (320)
T 3a99_A 238 LLYDMVCGDIPFEHDEE---IIR---GQVF--FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 301 (320)
T ss_dssp HHHHHHHSSCSCCSHHH---HHH---CCCC--CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred HHHHHHHCCCCCCChhh---hhc---cccc--ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence 99999986 443322 111 1111 1234578899999999999999999999999999998753
No 330
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.9e-28 Score=304.53 Aligned_cols=255 Identities=20% Similarity=0.231 Sum_probs=211.5
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCC-CCEEEEEECCCc
Q 001366 774 EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI-KNYLASADYDGV 852 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~-~~~LaSgs~Dgt 852 (1092)
.+.+|.+.|++++|+|++++|++|+.||+|+||++... .........+|...|.+++|+++. +++|++|+.||+
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~-----~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE-----THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETT-----EEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCC-----CCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe
Confidence 35689999999999999999999999999999998631 122233456799999999998753 789999999999
Q ss_pred EEEEECCCCc--eEEEeeccCccEEEEEEecCC--CCEEEEEeCCCcEEEEecCCCceee--eE-ecCCceEEEEEccC-
Q 001366 853 VKLWDACTGQ--TVSHYIEHEKRAWSVDFSQVH--PTKLASGSDDCSVKLWNINEKNSLA--TI-KNIANVCCVQFSAH- 924 (1092)
Q Consensus 853 V~IWD~~tg~--~i~~l~~h~~~V~sv~fsp~~--~~~laSgs~Dg~I~iWDl~~~~~l~--~l-~~~~~V~sl~fsp~- 924 (1092)
|++||+.+++ .+..+.+|...|++++|+| + +..+++|+.||+|++||++++.... .+ .+...|.+++|+|.
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcc
Confidence 9999999987 7778889999999999999 6 8999999999999999999874332 23 36788999999994
Q ss_pred ------------CCeEEEEEECCCeEEEEEcCCCC---cceEEecCCCCCeEEEEEcC----CCEEEEEECCCeEEEEEc
Q 001366 925 ------------SSHLLAFGSADYRTYCYDLRNAR---APWCVLAGHEKAVSYVKFLD----SGTLVTASTDNKLKLWDL 985 (1092)
Q Consensus 925 ------------~~~~latgs~Dg~I~vwDlr~~~---~~~~~l~~H~~~V~~v~fs~----~~~L~Sgs~Dg~I~vWDl 985 (1092)
+ .++++|+.||.|++||+++.. .....+.+|...|.+++|++ +.+|++|+.||+|++||+
T Consensus 158 ~~~~~~~~~~~d~-~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 158 IEEDGEHNGTKES-RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp ---------CGGG-CCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEE
T ss_pred cccccccccCCCC-CEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecC
Confidence 5 589999999999999999765 34567789999999999994 578999999999999999
Q ss_pred CCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCC
Q 001366 986 KRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLP 1038 (1092)
Q Consensus 986 ~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~ 1038 (1092)
++.... ..........|...|++++|+|+|.+|++|+.||.|++|++..+
T Consensus 237 ~~~~~~---~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 237 DNEQGP---WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp SSSSSC---CBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred CCCCCc---ceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 854321 11123344568889999999999999999999999999998753
No 331
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.96 E-value=2e-29 Score=303.44 Aligned_cols=245 Identities=16% Similarity=0.111 Sum_probs=180.7
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
+|.+.+.+ ++.|.||+|...+ .+..++.|+...... ......++..++...+||||+.++.....+...+
T Consensus 221 ~~~~~~~lG~G~fg~Vy~~~~~~----~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~-- 292 (495)
T 1opk_A 221 DITMKHKLGGGQYGEVYEGVWKK----YSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY-- 292 (495)
T ss_dssp GEEEEEESGGGTTSSEEEEEEGG----GTEEEEEEECCSSSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE--
T ss_pred HceeeeEecCCCCeEEEEEEEcC----CCeEEEEEEecCccc--chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEE--
Confidence 45555444 4789999998632 244566665533222 2344556777888889999998877654333333
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
++|||++||+|.++|+.. ...++...++.|+.||+.||+|||++||+||||||+||||+.++.+|
T Consensus 293 --------------lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~k 358 (495)
T 1opk_A 293 --------------IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVK 358 (495)
T ss_dssp --------------EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEE
T ss_pred --------------EEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEE
Confidence 389999999999999764 34588889999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+++.......
T Consensus 359 l~DFG~a~~~~~~~~----------------------------------------------------------------- 373 (495)
T 1opk_A 359 VADFGLSRLMTGDTY----------------------------------------------------------------- 373 (495)
T ss_dssp ECCTTCEECCTTCCE-----------------------------------------------------------------
T ss_pred EeecccceeccCCce-----------------------------------------------------------------
Confidence 999999876431000
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~ 528 (1092)
.......++..|+|||++.+..++.++|||||||+||||++ +
T Consensus 374 -------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g 416 (495)
T 1opk_A 374 -------------------------------------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 416 (495)
T ss_dssp -------------------------------------ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred -------------------------------------eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCC
Confidence 00012345678999999999899999999999999999998 4
Q ss_pred ---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|..... ......+.....++.....++.+.+|+.+||+.||.+|||+.+|++.
T Consensus 417 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~ 472 (495)
T 1opk_A 417 MSPYPGIDL-SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 472 (495)
T ss_dssp CCSSTTCCG-GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 333211 12222222222233344567889999999999999999999999873
No 332
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.96 E-value=9.8e-30 Score=293.94 Aligned_cols=250 Identities=10% Similarity=-0.002 Sum_probs=169.7
Q ss_pred HHHhhhc--cccceeeeCCCCC-ccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLN-AFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.+ +|.|+||+|...+ .....+..++.|+.... ..............+....|+|++.++.....+...+
T Consensus 67 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~-- 143 (365)
T 3e7e_A 67 VYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSV-- 143 (365)
T ss_dssp EEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEE--
T ss_pred EEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcE--
Confidence 4444444 4789999994322 01223566666665322 1112222333333445556899888777665443333
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc--
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNA----RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ-- 364 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~----~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~-- 364 (1092)
++||||+||+|.++|.. ....+++.+++.|+.||+.||+|||++||+||||||+||||+.
T Consensus 144 --------------lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~ 209 (365)
T 3e7e_A 144 --------------LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGF 209 (365)
T ss_dssp --------------EEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGG
T ss_pred --------------EEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccc
Confidence 38999999999999975 3456888899999999999999999999999999999999998
Q ss_pred ---------CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccC
Q 001366 365 ---------SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYG 435 (1092)
Q Consensus 365 ---------~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1092)
.+.+||+|||+++.+....
T Consensus 210 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~---------------------------------------------------- 237 (365)
T 3e7e_A 210 LEQDDEDDLSAGLALIDLGQSIDMKLFP---------------------------------------------------- 237 (365)
T ss_dssp TCC------CTTEEECCCTTCEEGGGSC----------------------------------------------------
T ss_pred cCccccccccCCEEEeeCchhhhhhccC----------------------------------------------------
Confidence 8999999999997643100
Q ss_pred CcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccc
Q 001366 436 NKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNI 515 (1092)
Q Consensus 436 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDI 515 (1092)
.....+..+||++|+|||++.+..++.++||
T Consensus 238 -------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 268 (365)
T 3e7e_A 238 -------------------------------------------------KGTIFTAKCETSGFQCVEMLSNKPWNYQIDY 268 (365)
T ss_dssp -------------------------------------------------TTEEECCSSCTTSCCCHHHHTTCCBSTHHHH
T ss_pred -------------------------------------------------CCceeeeecCCCCCCChHHhcCCCCCccccH
Confidence 0011225679999999999999999999999
Q ss_pred hhhhHHHHHHcCCCCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001366 516 YSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1092)
Q Consensus 516 wSLGvll~ell~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~ 584 (1092)
|||||+||||+++..+....... .......++.. ...+...+|+..||.++|.+|++..+.|.+.+
T Consensus 269 wslG~il~elltg~~pf~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l 334 (365)
T 3e7e_A 269 FGVAATVYCMLFGTYMKVKNEGG-ECKPEGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKL 334 (365)
T ss_dssp HHHHHHHHHHHHSSCCCEEEETT-EEEECSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccCCCC-ceeechhcccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHH
Confidence 99999999999872221000000 00001111111 22456789999999999999966555555443
No 333
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.96 E-value=1.7e-29 Score=299.01 Aligned_cols=243 Identities=16% Similarity=0.172 Sum_probs=158.8
Q ss_pred ccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhcc-CCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 220 LKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVAS-NASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 220 ~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
.+|.|.||.....+ +..++.|+.... ......++..++.. ..||||+.++.....+...+
T Consensus 25 ~G~~g~V~~~~~~~-----g~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~---------- 85 (434)
T 2rio_A 25 YGSSGTVVFQGSFQ-----GRPVAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLY---------- 85 (434)
T ss_dssp ECSTTCEEEEEESS-----SSEEEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEE----------
T ss_pred eCCCeEEEEEEEEC-----CeEEEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEE----------
Confidence 34667775432212 455666554321 12334455566654 48999998876654333333
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCC------CHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC-------
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKG------KRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS------- 365 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~------~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~------- 365 (1092)
++||||. ++|.++|...+... ...+++.|+.||+.||+|||++||+||||||+||||+..
T Consensus 86 ------lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~ 158 (434)
T 2rio_A 86 ------IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQ 158 (434)
T ss_dssp ------EEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCC
T ss_pred ------EEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCccccccc
Confidence 3899996 59999997654321 222467899999999999999999999999999999754
Q ss_pred ------CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccc
Q 001366 366 ------NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIE 439 (1092)
Q Consensus 366 ------~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (1092)
+.+||+|||+++........
T Consensus 159 ~~~~~~~~~kL~DFG~a~~~~~~~~~------------------------------------------------------ 184 (434)
T 2rio_A 159 QTGAENLRILISDFGLCKKLDSGQSS------------------------------------------------------ 184 (434)
T ss_dssp TTCCCSCEEEECCCTTCEECCC----------------------------------------------------------
T ss_pred ccCCCceEEEEcccccceecCCCCcc------------------------------------------------------
Confidence 48999999998875410000
Q ss_pred ccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-------CCCCcc
Q 001366 440 TANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-------GVCTTS 512 (1092)
Q Consensus 440 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-------~~~t~~ 512 (1092)
........+||++|+|||++.+ ..++.+
T Consensus 185 ---------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~ 219 (434)
T 2rio_A 185 ---------------------------------------------FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRS 219 (434)
T ss_dssp -------------------------------------------------------CCTTSCHHHHSCCCTTSCCCCCCTH
T ss_pred ---------------------------------------------ceeeecCCCCCCCccCHHHhccccccccccCcchh
Confidence 0001124579999999999976 568999
Q ss_pred ccchhhhHHHHHHcC-C---CCcHHHHH-HHHHhccccCCCCCC--CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhh
Q 001366 513 SNIYSLGVLFFELFG-R---FDSERALA-AAMSDLRDRILPPSF--LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVT 585 (1092)
Q Consensus 513 sDIwSLGvll~ell~-~---f~~~~~~~-~~~~~~~~~~~p~~~--~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~ 585 (1092)
+|||||||+||||++ + |....... ..+.........+.. ...++++.+|+.+||++||.+|||+.++|+||||
T Consensus 220 ~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f 299 (434)
T 2rio_A 220 IDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299 (434)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred hhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCcc
Confidence 999999999999998 4 43322111 111111111101111 1123678899999999999999999999999999
Q ss_pred hh
Q 001366 586 NE 587 (1092)
Q Consensus 586 ~~ 587 (1092)
..
T Consensus 300 ~~ 301 (434)
T 2rio_A 300 WP 301 (434)
T ss_dssp SC
T ss_pred CC
Confidence 65
No 334
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.96 E-value=1.4e-29 Score=283.69 Aligned_cols=246 Identities=14% Similarity=0.089 Sum_probs=166.8
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhc--cCCCCCCCccccceecCCCCCC
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVA--SNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
|.+.+.++ |.|.||+|... +..++.|++.... .....++..++. ..+|||++.++..........
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~------~~~vavK~~~~~~----~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~- 78 (301)
T 3q4u_A 10 ITLLECVGKGRYGEVWRGSWQ------GENVAVKIFSSRD----EKSWFRETELYNTVMLRHENILGFIASDMTSRHSS- 78 (301)
T ss_dssp CEEEEEEEECSSEEEEEEEET------TEEEEEEEECGGG----HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTE-
T ss_pred EEEEEeeccCCCcEEEEEEEC------CEEEEEEEecccc----chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCC-
Confidence 44444444 78999999762 4556666653321 111122222222 368999998766533211100
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhh--------hcCccccCCCCCCeE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHH--------TQGVTFLDLKPSSFK 361 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lH--------s~gIvHrDLKP~Nil 361 (1092)
.. ...+|||++|++|.++++.. .++...++.|+.||+.||+||| ++||+||||||+|||
T Consensus 79 ----~~-------~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil 145 (301)
T 3q4u_A 79 ----TQ-------LWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNIL 145 (301)
T ss_dssp ----EE-------EEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEE
T ss_pred ----ce-------eEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEE
Confidence 00 11389999999999999654 6888899999999999999999 999999999999999
Q ss_pred EccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 362 LLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 362 l~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
++.++.+||+|||+++........
T Consensus 146 l~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------------------------------- 169 (301)
T 3q4u_A 146 VKKNGQCCIADLGLAVMHSQSTNQ-------------------------------------------------------- 169 (301)
T ss_dssp ECTTSCEEECCCTTCEEEETTTTE--------------------------------------------------------
T ss_pred EcCCCCEEEeeCCCeeeccccccc--------------------------------------------------------
Confidence 999999999999998765421000
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC------CCCccccc
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG------VCTTSSNI 515 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~------~~t~~sDI 515 (1092)
.........||+.|+|||.+.+. .++.++||
T Consensus 170 -------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv 206 (301)
T 3q4u_A 170 -------------------------------------------LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 206 (301)
T ss_dssp -------------------------------------------EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHH
T ss_pred -------------------------------------------ccccccccccccceeChhhhcCcCCCCcccCCchhhH
Confidence 00001145799999999999886 56689999
Q ss_pred hhhhHHHHHHcCC----------CCcH-------HHHHHHHHhccccCCCCCCC------CCChhHHHHHHhccccCCCC
Q 001366 516 YSLGVLFFELFGR----------FDSE-------RALAAAMSDLRDRILPPSFL------SENPKEAGFCLWQLHPEPLS 572 (1092)
Q Consensus 516 wSLGvll~ell~~----------f~~~-------~~~~~~~~~~~~~~~p~~~~------~~~~~~~~li~~lL~~dP~~ 572 (1092)
|||||+||||+++ ..+. ................+..+ ..++.+.+|+.+||++||.+
T Consensus 207 wslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 286 (301)
T 3q4u_A 207 WAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSA 286 (301)
T ss_dssp HHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGG
T ss_pred HHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhh
Confidence 9999999999986 1111 01111111111111111111 12356889999999999999
Q ss_pred CCCHHHHhhh
Q 001366 573 RPTTREILQS 582 (1092)
Q Consensus 573 Rpsa~eiL~~ 582 (1092)
|||+.+|++.
T Consensus 287 Rps~~~i~~~ 296 (301)
T 3q4u_A 287 RLTALRIKKT 296 (301)
T ss_dssp SCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 9999999874
No 335
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.96 E-value=6.1e-30 Score=295.77 Aligned_cols=249 Identities=18% Similarity=0.170 Sum_probs=169.5
Q ss_pred HHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCC-----------CCCCCccccc
Q 001366 214 FFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNA-----------SPKPVGVGTA 280 (1092)
Q Consensus 214 ~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 280 (1092)
|.+.+.++ |.|.||++... ..+..++.|++.... .......++..++.... |||++.+++.
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 21 YILVRKLGWGHFSTVWLAKDM----VNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp EEEEEEEEECSSEEEEEEEET----TTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred EEEEEeeeecCCeEEEEEEec----CCCcEEEEEEecCCc--cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 55544444 78999999752 225566666653211 11122223333333332 7888887666
Q ss_pred eecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhc-CccccCCCCC
Q 001366 281 VVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQ-GVTFLDLKPS 358 (1092)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~-gIvHrDLKP~ 358 (1092)
........ . . ...+|+|+ |++|.+++... ...++..+++.|+.||+.||+|||++ ||+||||||+
T Consensus 95 ~~~~~~~~------~-~-----~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~ 161 (373)
T 1q8y_A 95 FNHKGPNG------V-H-----VVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPE 161 (373)
T ss_dssp EEEEETTE------E-E-----EEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGG
T ss_pred hhccCCCC------c-e-----EEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChH
Confidence 44322100 0 0 11378888 99999999764 34588889999999999999999998 9999999999
Q ss_pred CeEEccC------CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccC
Q 001366 359 SFKLLQS------NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPS 432 (1092)
Q Consensus 359 Nill~~~------~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (1092)
||||+.. +.+||+|||+++.....
T Consensus 162 NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~-------------------------------------------------- 191 (373)
T 1q8y_A 162 NVLMEIVDSPENLIQIKIADLGNACWYDEH-------------------------------------------------- 191 (373)
T ss_dssp GEEEEEEETTTTEEEEEECCCTTCEETTBC--------------------------------------------------
T ss_pred HeEEeccCCCcCcceEEEcccccccccCCC--------------------------------------------------
Confidence 9999543 47999999988664310
Q ss_pred ccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCcc
Q 001366 433 KYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTS 512 (1092)
Q Consensus 433 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~ 512 (1092)
.+...||+.|+|||++.+..++.+
T Consensus 192 --------------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~ 215 (373)
T 1q8y_A 192 --------------------------------------------------------YTNSIQTREYRSPEVLLGAPWGCG 215 (373)
T ss_dssp --------------------------------------------------------CCSCCSCGGGCCHHHHHTCCCCTH
T ss_pred --------------------------------------------------------CCCCCCCccccCcHHHhCCCCCch
Confidence 013468999999999999999999
Q ss_pred ccchhhhHHHHHHcCC---CCcHH---------HHHHHHHhccccCCCC-------------------------------
Q 001366 513 SNIYSLGVLFFELFGR---FDSER---------ALAAAMSDLRDRILPP------------------------------- 549 (1092)
Q Consensus 513 sDIwSLGvll~ell~~---f~~~~---------~~~~~~~~~~~~~~p~------------------------------- 549 (1092)
+|||||||+||||+++ |.... .....+..+ . .+|+
T Consensus 216 ~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (373)
T 1q8y_A 216 ADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL-G-ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLE 293 (373)
T ss_dssp HHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH-C-SCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHH
T ss_pred HhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhc-C-CCCHHHHhccchhhhhcCCcchhcccccccccchh
Confidence 9999999999999986 43321 111111111 0 0110
Q ss_pred -------CC-CCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 550 -------SF-LSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 550 -------~~-~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
.+ ...++.+.+||.+||++||.+|||+.|+|+||||.+..
T Consensus 294 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 341 (373)
T 1q8y_A 294 DVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL 341 (373)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred hhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence 00 11235677999999999999999999999999998753
No 336
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.96 E-value=1.6e-29 Score=285.19 Aligned_cols=243 Identities=19% Similarity=0.237 Sum_probs=171.8
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCc-----hhhHhhhhhhhhhccC----CCCCCCcccccee
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-----SDAALKAAGAMMVASN----ASPKPVGVGTAVV 282 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 282 (1092)
|.+.+.+ +|.|.||++.... .+..++.|++...... .......++...+... +|||++.+++...
T Consensus 33 y~~~~~lg~G~~g~Vy~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~ 108 (312)
T 2iwi_A 33 YRLGPLLGKGGFGTVFAGHRLT----DRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE 108 (312)
T ss_dssp CEEEEEEEEETTEEEEEEECTT----TCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred eEEeeEEEcCCCEEEEEEEEcc----CCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence 5554444 4789999997622 2455666665332211 1111222233333333 8999998776543
Q ss_pred cCCCCCCCccCCCCCccccCCCccccc-CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeE
Q 001366 283 SNGSLDLGARTGVPASCWIGGLRQGSS-DHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFK 361 (1092)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nil 361 (1092)
.+...+ .+|+| +.|++|.+++...+ .++..+++.++.||+.||+|||++||+||||||+||+
T Consensus 109 ~~~~~~----------------~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil 171 (312)
T 2iwi_A 109 TQEGFM----------------LVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENIL 171 (312)
T ss_dssp ----CE----------------EEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEE
T ss_pred cCCeEE----------------EEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEE
Confidence 322222 36888 79999999998764 4778899999999999999999999999999999999
Q ss_pred Ec-cCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccc
Q 001366 362 LL-QSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIET 440 (1092)
Q Consensus 362 l~-~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (1092)
++ .++.+||+|||+++.....
T Consensus 172 ~~~~~~~~kl~dfg~~~~~~~~---------------------------------------------------------- 193 (312)
T 2iwi_A 172 IDLRRGCAKLIDFGSGALLHDE---------------------------------------------------------- 193 (312)
T ss_dssp EETTTTEEEECCCSSCEECCSS----------------------------------------------------------
T ss_pred EeCCCCeEEEEEcchhhhcccC----------------------------------------------------------
Confidence 99 7899999999988764310
Q ss_pred cCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCC-Cccccchhhh
Q 001366 441 ANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVC-TTSSNIYSLG 519 (1092)
Q Consensus 441 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-t~~sDIwSLG 519 (1092)
......||+.|+|||++.+..+ +.++||||||
T Consensus 194 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG 226 (312)
T 2iwi_A 194 -----------------------------------------------PYTDFDGTRVYSPPEWISRHQYHALPATVWSLG 226 (312)
T ss_dssp -----------------------------------------------CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHH
T ss_pred -----------------------------------------------cccccCCcccccCceeeecCCCCCccchHHHHH
Confidence 0113468999999999987665 5699999999
Q ss_pred HHHHHHcCC---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhhc
Q 001366 520 VLFFELFGR---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQE 590 (1092)
Q Consensus 520 vll~ell~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~~ 590 (1092)
|+||||+++ |..... .... ...++ ...++.+.+|+.+||+.||.+|||+.|+|+||||....+
T Consensus 227 ~il~~l~~g~~pf~~~~~---~~~~--~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 227 ILLYDMVCGDIPFERDQE---ILEA--ELHFP---AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292 (312)
T ss_dssp HHHHHHHHSSCSCCSHHH---HHHT--CCCCC---TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred HHHHHHHHCCCCCCChHH---Hhhh--ccCCc---ccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence 999999986 443322 1111 11122 335788999999999999999999999999999987644
No 337
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.96 E-value=3.1e-29 Score=280.08 Aligned_cols=243 Identities=13% Similarity=0.033 Sum_probs=174.1
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCch-hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS-DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPA 297 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (1092)
..+|.|.||+|...+ ...+..++.|++....... ......++...+...+|||++.++.... ....+
T Consensus 26 g~G~~g~Vy~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~--------- 93 (291)
T 1xbb_A 26 GSGNFGTVKKGYYQM--KKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWM--------- 93 (291)
T ss_dssp EECSSEEEEEEEEEC--SSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-SSSEE---------
T ss_pred ccccCeeeEeeeecC--CCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC-CCCcE---------
Confidence 345789999994311 1224556666654332222 2344556677788889999998776542 11111
Q ss_pred ccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccc
Q 001366 298 SCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQK 377 (1092)
Q Consensus 298 ~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~ 377 (1092)
.+|||++|++|.+++...+ .++..+++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++
T Consensus 94 -------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 94 -------LVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp -------EEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred -------EEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 3899999999999998754 47788999999999999999999999999999999999999999999999987
Q ss_pred cccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCC
Q 001366 378 ETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHND 457 (1092)
Q Consensus 378 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 457 (1092)
........
T Consensus 166 ~~~~~~~~------------------------------------------------------------------------ 173 (291)
T 1xbb_A 166 ALRADENY------------------------------------------------------------------------ 173 (291)
T ss_dssp ECCTTCSE------------------------------------------------------------------------
T ss_pred eeccCCCc------------------------------------------------------------------------
Confidence 64411000
Q ss_pred cccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcHH
Q 001366 458 TNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSER 533 (1092)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~~ 533 (1092)
........+|+.|+|||.+.+..++.++|||||||+||||++ + |....
T Consensus 174 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 225 (291)
T 1xbb_A 174 ----------------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 225 (291)
T ss_dssp ----------------------------EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred ----------------------------ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC
Confidence 000012346788999999998889999999999999999998 5 43322
Q ss_pred HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 534 ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 534 ~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
.. .....+.....++.....++.+.+|+.+||++||.+||++.++++.
T Consensus 226 ~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 273 (291)
T 1xbb_A 226 GS-EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 273 (291)
T ss_dssp HH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 22 2222333333333344567889999999999999999999999873
No 338
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.96 E-value=3.7e-29 Score=282.33 Aligned_cols=255 Identities=13% Similarity=0.049 Sum_probs=172.3
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccC-chhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTM-PSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.+ +|.|.||++..... ...+..++.|++..... ........++...+...+|||++.++..........
T Consensus 36 y~~~~~lg~G~~g~V~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~-- 112 (313)
T 3brb_A 36 LILGKILGEGEFGSVMEGNLKQE-DGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG-- 112 (313)
T ss_dssp EEEEEEEEC-CCCCEEEEEEECT-TSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------
T ss_pred eeeccceeecCCeEEEEEEEecc-CCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC--
Confidence 4444433 47899999865211 11133455555533222 222334556677788889999998776654322211
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhh-----cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNA-----RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS 365 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~-----~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~ 365 (1092)
...+ ..+|+|++|++|.+++.. ....++..+++.|+.||+.||.|||++||+||||||+||+++.+
T Consensus 113 --~~~~-------~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 113 --IPKP-------MVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDD 183 (313)
T ss_dssp ----CE-------EEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTT
T ss_pred --Cccc-------EEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC
Confidence 0011 138999999999999943 33468888999999999999999999999999999999999999
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+.+||+|||+++........
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~------------------------------------------------------------ 203 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYY------------------------------------------------------------ 203 (313)
T ss_dssp SCEEECSCSCC---------------------------------------------------------------------
T ss_pred CcEEEeecCcceeccccccc------------------------------------------------------------
Confidence 99999999998764411000
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL 525 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~el 525 (1092)
.......+++.|+|||.+.+..++.++|||||||+||||
T Consensus 204 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 242 (313)
T 3brb_A 204 -----------------------------------------RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242 (313)
T ss_dssp ------------------------------------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------CcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHH
Confidence 000133567889999999999999999999999999999
Q ss_pred cC-C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 526 FG-R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 526 l~-~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
++ + |...... .....+.....++.....++.+.+|+.+||.+||.+|||+.+++++
T Consensus 243 ~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 302 (313)
T 3brb_A 243 ATRGMTPYPGVQNH-EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ 302 (313)
T ss_dssp HTTSCCSSTTCCGG-GHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HhcCCCCCccCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 98 4 3322211 1122222222334445567889999999999999999999999986
No 339
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1.1e-26 Score=272.46 Aligned_cols=280 Identities=12% Similarity=0.063 Sum_probs=226.9
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCC
Q 001366 781 VICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACT 860 (1092)
Q Consensus 781 ~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~t 860 (1092)
.+.+++|+|++.++++++.|++|++||+.+... ..........+|...|.+++|+++ +.++++++.|+.|++||+.+
T Consensus 124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQT--VRLSPPEKYKKKLGFVETISIPEH-NELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCE--EEECCCHHHHTTCCEEEEEEEGGG-TEEEEEEGGGTEEEEEETTT
T ss_pred CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeE--eeecCcccccccCCceeEEEEcCC-CEEEEEECCCCEEEEEECCC
Confidence 455899999888888888899999999875211 111111123468889999999887 88999999999999999999
Q ss_pred CceEEEeeccCccEEEEEEecCCCCEE-EEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEE------
Q 001366 861 GQTVSHYIEHEKRAWSVDFSQVHPTKL-ASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGS------ 933 (1092)
Q Consensus 861 g~~i~~l~~h~~~V~sv~fsp~~~~~l-aSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs------ 933 (1092)
++.+..+..|...+.+++|+| ++..+ ++++.|+.|++||+++++.+..+.....+.+++|+|++. ++++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~~~~~~~~ 278 (433)
T 3bws_A 201 LAYKATVDLTGKWSKILLYDP-IRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGK-ELYIAQFSASNQ 278 (433)
T ss_dssp CCEEEEEECSSSSEEEEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSS-EEEEEEEESCTT
T ss_pred ceEEEEEcCCCCCeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCC-EEEEEECCCCcc
Confidence 999999999999999999999 66666 566689999999999999988888888899999999996 666666
Q ss_pred --CCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC-CCE-EEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCe
Q 001366 934 --ADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD-SGT-LVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEK 1009 (1092)
Q Consensus 934 --~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~-~~~-L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V 1009 (1092)
.|+.|++||+++++. ... ..|...+.+++|++ ++. +++++.|+.|++||+.+ +.....+. +...+
T Consensus 279 ~~~dg~i~~~d~~~~~~-~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~--------~~~~~~~~-~~~~~ 347 (433)
T 3bws_A 279 ESGGGRLGIYSMDKEKL-IDT-IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE--------KKVQKSIP-VFDKP 347 (433)
T ss_dssp CSCCEEEEEEETTTTEE-EEE-EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT--------TEEEEEEE-CSSSE
T ss_pred ccCCCeEEEEECCCCcE-Eee-ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC--------CcEEEEec-CCCCC
Confidence 588999999997753 233 35566889999984 444 56778999999999983 44555554 67789
Q ss_pred EEEEEecCCCEEEEEec---------------CCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCC
Q 001366 1010 NFVGLSTADGYIACGSE---------------SNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRS 1074 (1092)
Q Consensus 1010 ~~v~~spdg~~lasgs~---------------Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~ 1074 (1092)
.+++|+|+|++|++++. ||.|++||..+++.+..+.. ...+.+++|+|++
T Consensus 348 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~---------------~~~~~~~~~s~dg 412 (433)
T 3bws_A 348 NTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA---------------GNQPTGLDVSPDN 412 (433)
T ss_dssp EEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC---------------SSSEEEEEECTTS
T ss_pred CeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC---------------CCCCceEEEcCCC
Confidence 99999999998888876 57999999998887776541 3468999999999
Q ss_pred CEEEEEec-CCeEEEEEc
Q 001366 1075 DMVVAANS-SGCIKVLQM 1091 (1092)
Q Consensus 1075 ~~Lasgs~-DG~V~vW~l 1091 (1092)
++|++++. ||.|++|++
T Consensus 413 ~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 413 RYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp CEEEEEETTTTEEEEEEE
T ss_pred CEEEEEECCCCeEEEEEe
Confidence 99998875 999999986
No 340
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.96 E-value=3.7e-29 Score=281.92 Aligned_cols=250 Identities=15% Similarity=0.177 Sum_probs=173.2
Q ss_pred CchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccC--chhhHhhhhhhhhhccCCCCCCCccccceecCC
Q 001366 210 GFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTM--PSDAALKAAGAMMVASNASPKPVGVGTAVVSNG 285 (1092)
Q Consensus 210 ~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (1092)
.+..|.+.+.++ |.|.||++.... .+..++.|++..... ........++...+...+|||++.++.....+.
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 105 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLL----DGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN 105 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETT----TCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred cccceEEEEeecCCCCceEEEEEEcC----CCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 344566655554 689999997521 245556655432221 222344556777788889999998776655433
Q ss_pred CCCCCccCCCCCccccCCCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE
Q 001366 286 SLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL 362 (1092)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill 362 (1092)
..+ .+|||++|++|.+++.. ....++..+++.++.||+.||.|||++||+||||||+||++
T Consensus 106 ~~~----------------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~ 169 (310)
T 2wqm_A 106 ELN----------------IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI 169 (310)
T ss_dssp EEE----------------EEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred cEE----------------EEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEE
Confidence 333 38999999999999964 34568888999999999999999999999999999999999
Q ss_pred ccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccC
Q 001366 363 LQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETAN 442 (1092)
Q Consensus 363 ~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1092)
+.++.+||+|||+++......
T Consensus 170 ~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------------------- 190 (310)
T 2wqm_A 170 TATGVVKLGDLGLGRFFSSKT----------------------------------------------------------- 190 (310)
T ss_dssp CTTSCEEECCC---------------------------------------------------------------------
T ss_pred cCCCCEEEEeccceeeecCCC-----------------------------------------------------------
Confidence 999999999999886543100
Q ss_pred ccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHH
Q 001366 443 ESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLF 522 (1092)
Q Consensus 443 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll 522 (1092)
.......||+.|+|||.+.+..++.++|||||||+|
T Consensus 191 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 226 (310)
T 2wqm_A 191 --------------------------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 226 (310)
T ss_dssp ----------------------------------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHH
Confidence 001134689999999999999999999999999999
Q ss_pred HHHcCC---CCcHH-HHHHHHHhccccCCCCC-CCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 523 FELFGR---FDSER-ALAAAMSDLRDRILPPS-FLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 523 ~ell~~---f~~~~-~~~~~~~~~~~~~~p~~-~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|||+++ |.... ........+.....++. ....++.+.+|+.+||++||.+|||+.++++.
T Consensus 227 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~ 291 (310)
T 2wqm_A 227 YEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV 291 (310)
T ss_dssp HHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 999986 43221 11222223333333332 23457889999999999999999999999974
No 341
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=3.9e-29 Score=284.65 Aligned_cols=249 Identities=14% Similarity=0.128 Sum_probs=168.3
Q ss_pred hHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
+|.+.+.++ |.|.||+|... +..++.|++.... .....+..+.......+|||++.++..........
T Consensus 38 ~y~~~~~lg~G~~g~V~~~~~~------~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~-- 107 (337)
T 3mdy_A 38 QIQMVKQIGKGRYGEVWMGKWR------GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSW-- 107 (337)
T ss_dssp HCEEEEEEEEETTEEEEEEEET------TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG--
T ss_pred ceEEEeEeecCCCeEEEEEEEC------CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC--
Confidence 455555554 78999999763 4556666653221 11111222222222348999998776654331100
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhc--------CccccCCCCCCeEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ--------GVTFLDLKPSSFKL 362 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~--------gIvHrDLKP~Nill 362 (1092)
.. ...+|||++|++|.++|+.. .++..+++.++.||+.||.|||++ ||+||||||+|||+
T Consensus 108 ---~~-------~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill 175 (337)
T 3mdy_A 108 ---TQ-------LYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV 175 (337)
T ss_dssp ---CE-------EEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE
T ss_pred ---Cc-------eEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE
Confidence 00 11389999999999999765 578889999999999999999999 99999999999999
Q ss_pred ccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccC
Q 001366 363 LQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETAN 442 (1092)
Q Consensus 363 ~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1092)
+.++.+||+|||+++.+......
T Consensus 176 ~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------------------------------- 198 (337)
T 3mdy_A 176 KKNGTCCIADLGLAVKFISDTNE--------------------------------------------------------- 198 (337)
T ss_dssp CTTSCEEECCCTTCEECC--------------------------------------------------------------
T ss_pred CCCCCEEEEeCCCceeecccccc---------------------------------------------------------
Confidence 99999999999998765411000
Q ss_pred ccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCcc------ccch
Q 001366 443 ESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTS------SNIY 516 (1092)
Q Consensus 443 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~------sDIw 516 (1092)
........+||+.|+|||++.+..++.. +|||
T Consensus 199 ------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diw 236 (337)
T 3mdy_A 199 ------------------------------------------VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMY 236 (337)
T ss_dssp ----------------------------------------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHH
T ss_pred ------------------------------------------ccCCCCCCccCcceeChhhcccccCCccccCccccchH
Confidence 0000114579999999999988766654 9999
Q ss_pred hhhHHHHHHcCC-------------CCc----HHHHHHHHHhccccCCCCCCC------CCChhHHHHHHhccccCCCCC
Q 001366 517 SLGVLFFELFGR-------------FDS----ERALAAAMSDLRDRILPPSFL------SENPKEAGFCLWQLHPEPLSR 573 (1092)
Q Consensus 517 SLGvll~ell~~-------------f~~----~~~~~~~~~~~~~~~~p~~~~------~~~~~~~~li~~lL~~dP~~R 573 (1092)
||||+||||+++ |.. .................+.++ ..++.+.+|+.+||++||.+|
T Consensus 237 slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R 316 (337)
T 3mdy_A 237 SFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASR 316 (337)
T ss_dssp HHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGS
T ss_pred HHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhC
Confidence 999999999986 111 001111111122222222221 223558899999999999999
Q ss_pred CCHHHHhhh
Q 001366 574 PTTREILQS 582 (1092)
Q Consensus 574 psa~eiL~~ 582 (1092)
||+.+++++
T Consensus 317 ps~~ell~~ 325 (337)
T 3mdy_A 317 LTALRVKKT 325 (337)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 999999986
No 342
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.96 E-value=3.3e-29 Score=297.97 Aligned_cols=237 Identities=16% Similarity=0.125 Sum_probs=175.9
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCC-CCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNG-SLDL 289 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 289 (1092)
+|.+.+.+ ++.|.||+|... +..++.|+..... ......++..++...+|||++.++....... ..+
T Consensus 194 ~~~~~~~lG~G~fg~V~~~~~~------~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~- 263 (450)
T 1k9a_A 194 ELKLLQTIGKGEFGDVMLGDYR------GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY- 263 (450)
T ss_dssp GEEEEEEEEECSSEEEEEEEET------TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEE-
T ss_pred HeEEEeeecCcCCeeEEEEEec------CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceE-
Confidence 44444444 378999999763 3455666553322 2334456677788889999998776644322 122
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~-~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
++|||++||+|.++|+..+. .++...++.++.||+.||+|||++||+||||||+|||++.++.+
T Consensus 264 ---------------iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~ 328 (450)
T 1k9a_A 264 ---------------IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVA 328 (450)
T ss_dssp ---------------EEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCE
T ss_pred ---------------EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCE
Confidence 38999999999999987654 36888899999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++.....
T Consensus 329 kl~DfG~a~~~~~~------------------------------------------------------------------ 342 (450)
T 1k9a_A 329 KVSDFGLTKEASST------------------------------------------------------------------ 342 (450)
T ss_dssp EECCCTTCEECC--------------------------------------------------------------------
T ss_pred EEeeCCCccccccc------------------------------------------------------------------
Confidence 99999998753200
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG- 527 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~- 527 (1092)
.....++..|+|||.+.+..++.++|||||||+||||++
T Consensus 343 ----------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~ 382 (450)
T 1k9a_A 343 ----------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 382 (450)
T ss_dssp --------------------------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTT
T ss_pred ----------------------------------------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhC
Confidence 001245678999999999999999999999999999997
Q ss_pred C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 528 R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 528 ~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
+ |...... ..+..+.....++.....++.+.+|+.+||+.||.+|||+.+|++
T Consensus 383 g~~P~~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~ 438 (450)
T 1k9a_A 383 GRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE 438 (450)
T ss_dssp TCCSSTTSCTT-THHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 4 4332111 112222222223334456788999999999999999999999986
No 343
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.95 E-value=3.1e-29 Score=277.92 Aligned_cols=241 Identities=14% Similarity=0.082 Sum_probs=175.0
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+...+ +|.|.||+|...+ +..++.|+..... .......++..++...+|||++.++.....+ ..
T Consensus 15 y~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~---- 82 (279)
T 1qpc_A 15 LKLVERLGAGQFGEVWMGYYNG-----HTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PI---- 82 (279)
T ss_dssp EEEEEEEEEETTEEEEEEEETT-----TEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SC----
T ss_pred hhheeeecCCCCeEEEEEEEcC-----CcEEEEEEecCCc--ccHHHHHHHHHHHHhCCCcCcceEEEEEcCC-Cc----
Confidence 4444443 4789999998643 3345555443222 2233445566778888999999876543211 11
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
..+|||++|++|.+++.... ..++..+++.++.||+.||+|||++||+||||||+||+++.++.+||
T Consensus 83 ------------~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl 150 (279)
T 1qpc_A 83 ------------YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKI 150 (279)
T ss_dssp ------------EEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEE
T ss_pred ------------EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEE
Confidence 13899999999999996532 35788899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++.......
T Consensus 151 ~Dfg~~~~~~~~~~------------------------------------------------------------------ 164 (279)
T 1qpc_A 151 ADFGLARLIEDNEY------------------------------------------------------------------ 164 (279)
T ss_dssp CCCTTCEECSSSCE------------------------------------------------------------------
T ss_pred CCCcccccccCccc------------------------------------------------------------------
Confidence 99999876441000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~- 528 (1092)
.......+|..|+|||.+.+..++.++|||||||++|||++ +
T Consensus 165 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~ 208 (279)
T 1qpc_A 165 ------------------------------------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208 (279)
T ss_dssp ------------------------------------ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTC
T ss_pred ------------------------------------ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCC
Confidence 00013346778999999998889999999999999999998 4
Q ss_pred --CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
|...... ..+..+.....+......++.+.+|+.+||+.||.+|||+.++++
T Consensus 209 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 209 IPYPGMTNP-EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp CSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCcccCHH-HHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 4332222 222233322223333455788999999999999999999999987
No 344
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.95 E-value=6.7e-29 Score=282.29 Aligned_cols=246 Identities=15% Similarity=0.074 Sum_probs=176.3
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCCCccc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVPASCW 300 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1092)
+|.|.||++.....-...+..++.|++... .........++...+...+|||++.++......... .
T Consensus 52 G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-------~----- 118 (326)
T 2w1i_A 52 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR-------N----- 118 (326)
T ss_dssp CSSEEEEEEEECTTSSSCCEEEEEEEESSC-CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-----------C-----
T ss_pred CCCeEEEEEEeccccCCCceEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC-------c-----
Confidence 368999998732111222556666665332 222333445667778888999999876553321100 0
Q ss_pred cCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccccccc
Q 001366 301 IGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETL 380 (1092)
Q Consensus 301 ~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~ 380 (1092)
...+|||++|++|.+++......++..+++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++...
T Consensus 119 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 119 --LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp --CEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred --eEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 123899999999999998876678898999999999999999999999999999999999999999999999987654
Q ss_pred ccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCccc
Q 001366 381 ESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNE 460 (1092)
Q Consensus 381 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 460 (1092)
.....
T Consensus 197 ~~~~~--------------------------------------------------------------------------- 201 (326)
T 2w1i_A 197 QDKEY--------------------------------------------------------------------------- 201 (326)
T ss_dssp SSCSE---------------------------------------------------------------------------
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 11000
Q ss_pred ccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCcHHH----H-
Q 001366 461 HHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERA----L- 535 (1092)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~~~----~- 535 (1092)
........+|..|+|||.+.+..++.++|||||||+||||+++..+... .
T Consensus 202 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~ 256 (326)
T 2w1i_A 202 -------------------------YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 256 (326)
T ss_dssp -------------------------EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHH
T ss_pred -------------------------cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHH
Confidence 0000133567789999999998899999999999999999986332211 0
Q ss_pred -------------HHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 536 -------------AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 536 -------------~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
......+.....++.....++.+.+|+.+||.+||.+|||+.+|++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 257 RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp HHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1111222222233444556788999999999999999999999986
No 345
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.95 E-value=2.6e-29 Score=286.34 Aligned_cols=254 Identities=12% Similarity=0.121 Sum_probs=167.6
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+.+.+ +|.|.||+|... +..++.|++.... .......++...+...+|||++.++..........
T Consensus 14 ~y~~~~~lg~G~~g~Vy~~~~~------~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~-- 83 (336)
T 3g2f_A 14 NLKLLELIGRGRYGAVYKGSLD------ERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADG-- 83 (336)
T ss_dssp SEEEEEEEEECSSEEEEEEEET------TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTS--
T ss_pred HhheeeecccCCCeEEEEEEEC------CeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCC--
Confidence 45554444 478999999652 4556666653221 11112222333344579999998764322111000
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhc---------CccccCCCCCCeE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQ---------GVTFLDLKPSSFK 361 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~---------gIvHrDLKP~Nil 361 (1092)
.. . ..++||||+|++|.++|+... .+...++.|+.||+.||.|||++ ||+||||||+|||
T Consensus 84 --~~--~-----~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nil 152 (336)
T 3g2f_A 84 --RM--E-----YLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVL 152 (336)
T ss_dssp --CE--E-----EEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEE
T ss_pred --Cc--e-----EEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEE
Confidence 00 0 114899999999999997663 47778999999999999999999 9999999999999
Q ss_pred EccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 362 LLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 362 l~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
++.++.+||+|||+++.+........
T Consensus 153 l~~~~~~kL~DFG~a~~~~~~~~~~~------------------------------------------------------ 178 (336)
T 3g2f_A 153 VKNDGTCVISDFGLSMRLTGNRLVRP------------------------------------------------------ 178 (336)
T ss_dssp ECTTSCEEECCCTTCEECSSSSCC--------------------------------------------------------
T ss_pred EcCCCcEEEeeccceeecccccccCc------------------------------------------------------
Confidence 99999999999999987552110000
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC-------CCCCcccc
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG-------GVCTTSSN 514 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-------~~~t~~sD 514 (1092)
..........+||+.|+|||++.+ ..++.++|
T Consensus 179 -----------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~D 217 (336)
T 3g2f_A 179 -----------------------------------------GEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVD 217 (336)
T ss_dssp ------------------------------------------------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHH
T ss_pred -----------------------------------------cccccccccCCCccceeCchhhcCCcccccccccccccc
Confidence 000011125679999999999987 45678999
Q ss_pred chhhhHHHHHHcCC----CCcH-------------------HHHHHHHHhcc-ccCCCCCCCC---CChhHHHHHHhccc
Q 001366 515 IYSLGVLFFELFGR----FDSE-------------------RALAAAMSDLR-DRILPPSFLS---ENPKEAGFCLWQLH 567 (1092)
Q Consensus 515 IwSLGvll~ell~~----f~~~-------------------~~~~~~~~~~~-~~~~p~~~~~---~~~~~~~li~~lL~ 567 (1092)
||||||+||||+++ |+.. ........... ...+|+.+.. .++.+.+|+.+||+
T Consensus 218 iwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (336)
T 3g2f_A 218 MYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWD 297 (336)
T ss_dssp HHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhc
Confidence 99999999999975 1111 11111111111 1122222222 22468899999999
Q ss_pred cCCCCCCCHHHHhhh
Q 001366 568 PEPLSRPTTREILQS 582 (1092)
Q Consensus 568 ~dP~~Rpsa~eiL~~ 582 (1092)
+||.+|||+.|+++.
T Consensus 298 ~dP~~Rps~~e~l~~ 312 (336)
T 3g2f_A 298 QDAEARLTAQXAEER 312 (336)
T ss_dssp SSGGGSCCHHHHHHH
T ss_pred CChhhCcchHHHHHH
Confidence 999999999999764
No 346
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.95 E-value=4.3e-29 Score=282.13 Aligned_cols=259 Identities=13% Similarity=0.074 Sum_probs=178.9
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||++... ..+..++.|++... .........++..++...+|||++.++..........
T Consensus 31 y~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--- 102 (317)
T 2buj_A 31 YLFIQKLGEGGFSYVDLVEGL----HDGHFYALKRILCH-EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAK--- 102 (317)
T ss_dssp EEEEEEEEC--CEEEEEEEET----TTCCEEEEEEEEES-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTE---
T ss_pred EEEEEEecCCCCeEEEEEEec----CCCcEEEEEEEecC-CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCC---
Confidence 4444444 378999999852 12455666655332 2233344556777788889999998766543211000
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcE
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNA---RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQV 368 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~---~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~v 368 (1092)
.. ...+|||++|++|.+++.. .+..++..+++.++.||+.||.|||++||+||||||+||+++.++.+
T Consensus 103 --~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~ 173 (317)
T 2buj_A 103 --HE-------AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQP 173 (317)
T ss_dssp --EE-------EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCE
T ss_pred --ce-------eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCE
Confidence 00 1138999999999999966 35568888999999999999999999999999999999999999999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
|++|||+++........
T Consensus 174 kl~dfg~~~~~~~~~~~--------------------------------------------------------------- 190 (317)
T 2buj_A 174 VLMDLGSMNQACIHVEG--------------------------------------------------------------- 190 (317)
T ss_dssp EECCCSSCEESCEEEES---------------------------------------------------------------
T ss_pred EEEecCcchhccccccc---------------------------------------------------------------
Confidence 99999988764310000
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCC---CCccccchhhhHHHHHH
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGV---CTTSSNIYSLGVLFFEL 525 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~---~t~~sDIwSLGvll~el 525 (1092)
..............||+.|+|||++.+.. ++.++|||||||++|||
T Consensus 191 -------------------------------~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el 239 (317)
T 2buj_A 191 -------------------------------SRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAM 239 (317)
T ss_dssp -------------------------------HHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHH
T ss_pred -------------------------------ccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHH
Confidence 00000001122456899999999997644 68999999999999999
Q ss_pred cCCCCcHHHHH----HHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhh
Q 001366 526 FGRFDSERALA----AAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSE 583 (1092)
Q Consensus 526 l~~f~~~~~~~----~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~ 583 (1092)
+++..+..... ............+.....++.+.+|+.+||.+||.+|||+.+++++-
T Consensus 240 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L 301 (317)
T 2buj_A 240 MFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQL 301 (317)
T ss_dssp HHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHh
Confidence 98743332211 11111122222334455678899999999999999999999999864
No 347
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.95 E-value=4.5e-29 Score=296.99 Aligned_cols=242 Identities=15% Similarity=0.080 Sum_probs=174.4
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ ++.|.||+|...+ ...++.|+...... ......++..++...+|||++.++..... ...+
T Consensus 186 ~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~--- 254 (452)
T 1fmk_A 186 LRLEVKLGQGCFGEVWMGTWNG-----TTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY--- 254 (452)
T ss_dssp EEEEEEEEECSSCEEEEEEETT-----TEEEEEEECCTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE---
T ss_pred ceeeeeecCCCCeEEEEEEECC-----CceEEEEEeccCCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceE---
Confidence 4444433 4789999998754 23456655533222 22344567778888899999987754321 1111
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEE
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
++|||++||+|.++|+. .+..++..+++.++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus 255 -------------iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl 321 (452)
T 1fmk_A 255 -------------IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 321 (452)
T ss_dssp -------------EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred -------------EEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEE
Confidence 38999999999999965 3345888899999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++.......
T Consensus 322 ~DfG~a~~~~~~~~------------------------------------------------------------------ 335 (452)
T 1fmk_A 322 ADFGLARLIEDNEY------------------------------------------------------------------ 335 (452)
T ss_dssp CCCCTTC-------------------------------------------------------------------------
T ss_pred CCCccceecCCCce------------------------------------------------------------------
Confidence 99999876431000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C-
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R- 528 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~- 528 (1092)
.......++..|+|||.+.+..++.++|||||||+||||++ +
T Consensus 336 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~ 379 (452)
T 1fmk_A 336 ------------------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379 (452)
T ss_dssp -------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred ------------------------------------ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCC
Confidence 00012346778999999999999999999999999999998 4
Q ss_pred --CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|.+..... ....+.....++.....++.+.+|+.+||++||.+|||+.+|++.
T Consensus 380 ~P~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~ 434 (452)
T 1fmk_A 380 VPYPGMVNRE-VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 434 (452)
T ss_dssp CSSTTCCHHH-HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 44332222 222222222233334567889999999999999999999999874
No 348
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.95 E-value=1.4e-29 Score=296.17 Aligned_cols=248 Identities=12% Similarity=0.070 Sum_probs=175.5
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||+|... ..+..++.|++.............++..++...+||||+.+++........
T Consensus 11 y~i~~~LG~G~~g~Vy~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~---- 82 (396)
T 4eut_A 11 WLLSDILGQGATANVFRGRHK----KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTR---- 82 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEET----TTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTC----
T ss_pred eEEEEEEEcCCCeEEEEEEEC----CCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCC----
Confidence 4444444 478999999763 235667777764433333334455677788888999999877654422111
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE----ccC
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARG--HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL----LQS 365 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~--~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill----~~~ 365 (1092)
.. .++||||+|++|.++++... ..++..+++.|+.||+.||+|||++||+||||||+|||+ +..
T Consensus 83 ---~~-------~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~ 152 (396)
T 4eut_A 83 ---HK-------VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQ 152 (396)
T ss_dssp ---CE-------EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSC
T ss_pred ---ee-------EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCc
Confidence 01 13899999999999997643 238888999999999999999999999999999999999 677
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+.+||+|||+++......
T Consensus 153 ~~~kL~DFG~a~~~~~~~-------------------------------------------------------------- 170 (396)
T 4eut_A 153 SVYKLTDFGAARELEDDE-------------------------------------------------------------- 170 (396)
T ss_dssp EEEEECCGGGCEECCCGG--------------------------------------------------------------
T ss_pred eeEEEecCCCceEccCCC--------------------------------------------------------------
Confidence 789999999987644100
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccC--------CCCCccccchh
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSG--------GVCTTSSNIYS 517 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~--------~~~t~~sDIwS 517 (1092)
......||+.|+|||++.+ ..++.++||||
T Consensus 171 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwS 208 (396)
T 4eut_A 171 ------------------------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWS 208 (396)
T ss_dssp ------------------------------------------GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCCccccCHHHhhccccccccccCCCcHHHHHH
Confidence 0114568999999999875 56789999999
Q ss_pred hhHHHHHHcCC---CCc---HHHHHHHHHhccccCCC--------------------CCCCC----CChhHHHHHHhccc
Q 001366 518 LGVLFFELFGR---FDS---ERALAAAMSDLRDRILP--------------------PSFLS----ENPKEAGFCLWQLH 567 (1092)
Q Consensus 518 LGvll~ell~~---f~~---~~~~~~~~~~~~~~~~p--------------------~~~~~----~~~~~~~li~~lL~ 567 (1092)
|||++|||+++ |.+ .......+..+.....+ +.... ..+.+.+|+.+||.
T Consensus 209 lG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~ 288 (396)
T 4eut_A 209 IGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILE 288 (396)
T ss_dssp HHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhc
Confidence 99999999986 321 11112222222211111 11111 22456799999999
Q ss_pred cCCCCCCCHHHHhhhh
Q 001366 568 PEPLSRPTTREILQSE 583 (1092)
Q Consensus 568 ~dP~~Rpsa~eiL~~~ 583 (1092)
+||.+||++.++++..
T Consensus 289 ~dP~~R~s~~e~l~~l 304 (396)
T 4eut_A 289 ADQEKCWGFDQFFAET 304 (396)
T ss_dssp CCTTTSCCHHHHHHHH
T ss_pred cChhhhccHHHHHHHH
Confidence 9999999999987753
No 349
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.95 E-value=6.4e-29 Score=280.35 Aligned_cols=248 Identities=18% Similarity=0.194 Sum_probs=171.3
Q ss_pred CchhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCc--hhhHhhhhhhhhhccCCCCCCCccccceecCC
Q 001366 210 GFSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP--SDAALKAAGAMMVASNASPKPVGVGTAVVSNG 285 (1092)
Q Consensus 210 ~f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (1092)
-+..|.+.+.++ +.|.||++.... .+..++.|++...... .......++..++...+|||++.++.....+.
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~ 107 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTV----RERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG 107 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETT----TTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcC----CCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC
Confidence 344566666554 689999997521 2455666665332211 11234456677788889999998777655433
Q ss_pred CCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccC
Q 001366 286 SLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQS 365 (1092)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~ 365 (1092)
..+ ++|||++|++|.++++..+ .++..+++.++.||+.||+|||++||+||||||+||+++.+
T Consensus 108 ~~~----------------lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~ 170 (309)
T 2h34_A 108 QLY----------------VDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSAD 170 (309)
T ss_dssp EEE----------------EEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred eEE----------------EEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCC
Confidence 333 3899999999999998764 47787999999999999999999999999999999999999
Q ss_pred CcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccc
Q 001366 366 NQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESD 445 (1092)
Q Consensus 366 ~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (1092)
+.+||+|||+++......
T Consensus 171 ~~~kl~Dfg~~~~~~~~~-------------------------------------------------------------- 188 (309)
T 2h34_A 171 DFAYLVDFGIASATTDEK-------------------------------------------------------------- 188 (309)
T ss_dssp SCEEECSCCC----------------------------------------------------------------------
T ss_pred CCEEEecCccCccccccc--------------------------------------------------------------
Confidence 999999999886643100
Q ss_pred cccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHH
Q 001366 446 INEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL 525 (1092)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~el 525 (1092)
........||+.|+|||.+.+..++.++|||||||+||||
T Consensus 189 ----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 228 (309)
T 2h34_A 189 ----------------------------------------LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYEC 228 (309)
T ss_dssp ------------------------------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHH
T ss_pred ----------------------------------------cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHH
Confidence 0011145689999999999999999999999999999999
Q ss_pred cCC---CCcHHHHHHHHHhccccCCC--CCCCCCChhHHHHHHhccccCCCCCC-CHHHHhh
Q 001366 526 FGR---FDSERALAAAMSDLRDRILP--PSFLSENPKEAGFCLWQLHPEPLSRP-TTREILQ 581 (1092)
Q Consensus 526 l~~---f~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~li~~lL~~dP~~Rp-sa~eiL~ 581 (1092)
+++ |...... .....+.....+ ......++.+.+|+.+||++||.+|| +++++++
T Consensus 229 ~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 229 LTGSPPYQGDQLS-VMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp HHSSCSSCSCHHH-HHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred HHCCCCCCCchHH-HHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence 985 5444332 222222222211 12345578899999999999999999 7777765
No 350
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.95 E-value=3e-29 Score=278.15 Aligned_cols=240 Identities=15% Similarity=0.108 Sum_probs=171.2
Q ss_pred chhHHHhhhcc--ccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCC
Q 001366 211 FSEFFVKTTLK--GKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 211 f~~~~~~~~~~--g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
+.+|.+.+.++ |.|.||++... +..++.|+.... .......++...+...+|||++.++.........
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~- 89 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR------GNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG- 89 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET------TEEEEEEECCCC---C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--C-
T ss_pred hhhceEEeEEecCCCceEEEEEEc------CCEEEEEEecch---hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCc-
Confidence 34555555554 78999999753 344555555322 1233445567778888999999877653322110
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCc
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGH-KGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~-~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~ 367 (1092)
...+|||++|++|.+++...+. .++..+++.++.||+.||.|||++||+||||||+||+++.++.
T Consensus 90 --------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~ 155 (278)
T 1byg_A 90 --------------LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV 155 (278)
T ss_dssp --------------CEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSC
T ss_pred --------------eEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCc
Confidence 1138999999999999976532 3677789999999999999999999999999999999999999
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+|++|||+++.....
T Consensus 156 ~~l~Dfg~~~~~~~~----------------------------------------------------------------- 170 (278)
T 1byg_A 156 AKVSDFGLTKEASST----------------------------------------------------------------- 170 (278)
T ss_dssp EEECCCCC------------------------------------------------------------------------
T ss_pred EEEeecccccccccc-----------------------------------------------------------------
Confidence 999999988653310
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~ 527 (1092)
.....+++.|+|||.+.+..++.++|||||||++|||++
T Consensus 171 -----------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t 209 (278)
T 1byg_A 171 -----------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209 (278)
T ss_dssp ----------------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred -----------------------------------------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHh
Confidence 002245778999999998899999999999999999997
Q ss_pred -C---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 528 -R---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 528 -~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
+ |..... ......+.....++.....++.+.+|+.+||++||.+||++.++++
T Consensus 210 ~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 266 (278)
T 1byg_A 210 FGRVPYPRIPL-KDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 266 (278)
T ss_dssp TSCCSCTTSCG-GGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCCCCCH-HHHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence 5 332211 1122222222233334456788999999999999999999999987
No 351
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.95 E-value=1.1e-28 Score=275.47 Aligned_cols=249 Identities=12% Similarity=0.063 Sum_probs=170.0
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||++... ..+..++.|+....... ....++..++....|++++..+.........
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~---- 79 (296)
T 4hgt_A 11 YRLGRKIGSGSFGDIYLGTDI----AAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDY---- 79 (296)
T ss_dssp CEEEEEEEECSSSEEEEEEET----TTTEEEEEEEEEC---C---CCHHHHHHHHHHHTTSTTCCCEEEEEEETTE----
T ss_pred eEEeeeecCCCCeEEEEEEEc----CCCceEEEEeecccccc---hHHHHHHHHHHHhcCCCCCCeeeeecCCCCc----
Confidence 4444444 478999999742 12455666654322221 1233344455666677766543332111111
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE---ccCCcE
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL---LQSNQV 368 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill---~~~~~v 368 (1092)
..++|||+ |++|.+++......++..+++.++.||+.||.|||++||+||||||+|||+ +..+.+
T Consensus 80 -----------~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~ 147 (296)
T 4hgt_A 80 -----------NVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 147 (296)
T ss_dssp -----------EEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCE
T ss_pred -----------eEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeE
Confidence 11389999 999999998766678999999999999999999999999999999999999 788999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++.........
T Consensus 148 kL~Dfg~a~~~~~~~~~~-------------------------------------------------------------- 165 (296)
T 4hgt_A 148 YIIDFGLAKKYRDARTHQ-------------------------------------------------------------- 165 (296)
T ss_dssp EECCCTTCEECBCTTTCC--------------------------------------------------------------
T ss_pred EEecCccceeccCcccCc--------------------------------------------------------------
Confidence 999999998755211000
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~ 528 (1092)
..+........||+.|+|||.+.+..++.++|||||||+||||+++
T Consensus 166 ----------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g 211 (296)
T 4hgt_A 166 ----------------------------------HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG 211 (296)
T ss_dssp ----------------------------------BCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred ----------------------------------cCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcC
Confidence 0001111256789999999999999999999999999999999986
Q ss_pred ---CCcH------HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 529 ---FDSE------RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 529 ---f~~~------~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
|... ...............+......++.+.+|+.+||+.||.+|||+.++++
T Consensus 212 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 212 SLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp SCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred CCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 4321 1111111111111111112345788999999999999999999999987
No 352
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=3e-26 Score=260.47 Aligned_cols=284 Identities=12% Similarity=0.142 Sum_probs=225.6
Q ss_pred chhhhccchhhhhhccccccCCC-----CcEEeEcCCeEEEEEccc-ceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEE
Q 001366 723 NDLLRDRENLFLAQQDQEIQNPT-----DRLGAFFDGLCKYARYSK-FEVQGMLRTGEFNNSANVICSISFDRDEDHFAA 796 (1092)
Q Consensus 723 ~~~l~~~~~~~~~~~~~~~~~~~-----~~l~~~~D~~~k~w~~~~-~~~~~~l~~~~l~~h~~~V~sl~fspdg~~lat 796 (1092)
..++.+|.+.+..+.+ +|+ -.++++.|+.+++|++.. .... ...+.+|...|++++|+|++++|++
T Consensus 32 ~~~~~~h~~~v~~~~~----~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSF----SPPTLPGNFLIAGSWANDVRCWEVQDSGQTI----PKAQQMHTGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp EECSSCCSSCEEEEEE----CCTTSSSEEEEEEETTSEEEEEEECTTSCEE----EEEEEECSSCEEEEEECTTSSEEEE
T ss_pred eEeccCCCCceEEEEE----cCCCCCceEEEEECCCCcEEEEEcCCCCcee----EEEeccccCCEEEEEECcCCCEEEE
Confidence 4556778777766644 454 245778999999999875 2221 1235579999999999999999999
Q ss_pred EeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEE--ecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccE
Q 001366 797 AGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCW--NNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRA 874 (1092)
Q Consensus 797 gg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~--sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V 874 (1092)
|+.|+.|+|||+... .......|...|.+++| +++ +.+|++++.||+|++||+.+++.+..+..|. .+
T Consensus 104 ~~~dg~v~iwd~~~~--------~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~ 173 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSN--------QAIQIAQHDAPVKTIHWIKAPN-YSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RC 173 (368)
T ss_dssp EETTSEEEEEETTTT--------EEEEEEECSSCEEEEEEEECSS-CEEEEEEETTSEEEEECSSCSSCSEEEECSS-CE
T ss_pred EcCCCcEEEEEcCCC--------CceeeccccCceEEEEEEeCCC-CCEEEEccCCCcEEEEECCCCcEEEEEecCC-Cc
Confidence 999999999998752 12235679999999999 776 7899999999999999999999988888665 56
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe---cCCceEEEEEccCCC---eEEEEEECCCeEEEEEcCCCC-
Q 001366 875 WSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK---NIANVCCVQFSAHSS---HLLAFGSADYRTYCYDLRNAR- 947 (1092)
Q Consensus 875 ~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~---~~~~V~sl~fsp~~~---~~latgs~Dg~I~vwDlr~~~- 947 (1092)
.++.+.+ ..+++++.|+.+++||++......... ....+.++.+.++.. ..+++|+.|+.|++||++...
T Consensus 174 ~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~ 250 (368)
T 3mmy_A 174 YCADVIY---PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP 250 (368)
T ss_dssp EEEEEET---TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH
T ss_pred eEEEecC---CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc
Confidence 6777765 578899999999999998765443322 234566666665442 249999999999999999764
Q ss_pred -cceEEecCCCC------------CeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEE
Q 001366 948 -APWCVLAGHEK------------AVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVG 1013 (1092)
Q Consensus 948 -~~~~~l~~H~~------------~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~ 1013 (1092)
.....+.+|.. .|.+++|+ ++.+|++++.||.|++||+. .+.++..+.+|...|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~--------~~~~~~~~~~~~~~v~~~~ 322 (368)
T 3mmy_A 251 AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKD--------ARTKLKTSEQLDQPISACC 322 (368)
T ss_dssp HHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETT--------TTEEEEECCCCSSCEEEEE
T ss_pred cccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECC--------CCcEEEEecCCCCCceEEE
Confidence 24566777765 79999999 66789999999999999998 4677889999999999999
Q ss_pred EecCCCEEEEEecCCcEEEEeC
Q 001366 1014 LSTADGYIACGSESNEVYAYHR 1035 (1092)
Q Consensus 1014 ~spdg~~lasgs~Dg~I~Iwd~ 1035 (1092)
|+|+|.+|++|+.|+..+.|+.
T Consensus 323 ~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 323 FNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp ECTTSSCEEEEECCCSTTCGGG
T ss_pred ECCCCCeEEEEecccccccccc
Confidence 9999999999999876555543
No 353
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=1.9e-25 Score=258.08 Aligned_cols=272 Identities=11% Similarity=0.039 Sum_probs=218.2
Q ss_pred EEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEE-EEEeCCCcEEEEEcCCCCCCCcccccceeeec
Q 001366 748 LGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHF-AAAGVSKKIKIFEFNALFNDSVDVYYPAVEMS 826 (1092)
Q Consensus 748 l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~l-atgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~ 826 (1092)
++++.|+.+++|+....++...+. .|. .+.+++|+|+|+++ ++++.|++|++||+.+. .......
T Consensus 6 vs~~~d~~v~v~d~~~~~~~~~~~-----~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~--------~~~~~~~ 71 (391)
T 1l0q_A 6 IANSESDNISVIDVTSNKVTATIP-----VGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATN--------NVIATVP 71 (391)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEE-----CSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTT--------EEEEEEE
T ss_pred EEcCCCCEEEEEECCCCeEEEEee-----cCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCC--------eEEEEEE
Confidence 355678999999998876655443 443 58999999999976 67779999999998652 1122233
Q ss_pred CCCCeEEEEEecCCCCEE-EEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEE-EEEeCCCcEEEEecCCC
Q 001366 827 NRSKLSCVCWNNYIKNYL-ASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKL-ASGSDDCSVKLWNINEK 904 (1092)
Q Consensus 827 h~~~V~~v~~sp~~~~~L-aSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~l-aSgs~Dg~I~iWDl~~~ 904 (1092)
+...+.+++|+|+ +++| ++++.|+.|++||+.+++.+..+..| ..+.+++|+| +++.+ ++++.|+.|++||+.++
T Consensus 72 ~~~~v~~~~~spd-g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~ 148 (391)
T 1l0q_A 72 AGSSPQGVAVSPD-GKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTK 148 (391)
T ss_dssp CSSSEEEEEECTT-SSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTT
T ss_pred CCCCccceEECCC-CCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECC-CCCEEEEEeCCCCEEEEEECCCC
Confidence 4458999999998 6655 55667799999999999988888754 4689999999 77765 78888999999999999
Q ss_pred ceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEE---CCCeE
Q 001366 905 NSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTAS---TDNKL 980 (1092)
Q Consensus 905 ~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs---~Dg~I 980 (1092)
+.+..+.....+.+++|+|++..++++++.++.|++||+++.+. ...+ .|...+.+++|+ ++.+|++++ .++.|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~-~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v 226 (391)
T 1l0q_A 149 AVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV-IDTV-KVEAAPSGIAVNPEGTKAYVTNVDKYFNTV 226 (391)
T ss_dssp EEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEE-ECSSEEEEEEECTTSSEEEEEEECSSCCEE
T ss_pred cEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE-EEEE-ecCCCccceEECCCCCEEEEEecCcCCCcE
Confidence 99998888888999999999976667888999999999998753 3333 356688999998 566788777 68999
Q ss_pred EEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEE-EEEecCCcEEEEeCCCCCceeeeecc
Q 001366 981 KLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYI-ACGSESNEVYAYHRSLPMPITSYKFG 1047 (1092)
Q Consensus 981 ~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~l-asgs~Dg~I~Iwd~~~~~~i~~~~~~ 1047 (1092)
++||+. .+..+..+..|. .+.+++|+|+|++| ++++.|+.|++||..+++.+..+..+
T Consensus 227 ~~~d~~--------~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~ 285 (391)
T 1l0q_A 227 SMIDTG--------TNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVG 285 (391)
T ss_dssp EEEETT--------TTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred EEEECC--------CCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECC
Confidence 999998 345666777665 57899999999977 67788999999999999888777643
No 354
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.95 E-value=7.5e-29 Score=306.64 Aligned_cols=244 Identities=13% Similarity=0.034 Sum_probs=176.6
Q ss_pred hhccccceeeeCCCCCccccccccccccccccccCc-hhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCCC
Q 001366 218 TTLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-SDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGVP 296 (1092)
Q Consensus 218 ~~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (1092)
-..+|.|+||+|...+ ...+..++.|+....... .......++..++...+||||+.++.....+. .+
T Consensus 377 LG~G~fG~Vy~~~~~~--~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-~~-------- 445 (635)
T 4fl3_A 377 LGSGNFGTVKKGYYQM--KKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WM-------- 445 (635)
T ss_dssp EEECSSEEEEEEEEEC--SSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSS-EE--------
T ss_pred eccCCCEEEEEEEEcC--CCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-EE--------
Confidence 3456899999995421 122455666665433222 22344566777888889999998876543211 11
Q ss_pred CccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEeccccc
Q 001366 297 ASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQ 376 (1092)
Q Consensus 297 ~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~ 376 (1092)
++|||++|++|.++|...+ .++..+++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||++
T Consensus 446 --------lv~E~~~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla 516 (635)
T 4fl3_A 446 --------LVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 516 (635)
T ss_dssp --------EEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHH
T ss_pred --------EEEEccCCCCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCc
Confidence 3899999999999997654 5777799999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCC
Q 001366 377 KETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHN 456 (1092)
Q Consensus 377 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 456 (1092)
+.+......
T Consensus 517 ~~~~~~~~~----------------------------------------------------------------------- 525 (635)
T 4fl3_A 517 KALRADENY----------------------------------------------------------------------- 525 (635)
T ss_dssp HHTTC---------------------------------------------------------------------------
T ss_pred cccccCccc-----------------------------------------------------------------------
Confidence 875421000
Q ss_pred CcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C---CCcH
Q 001366 457 DTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R---FDSE 532 (1092)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~---f~~~ 532 (1092)
....+...||+.|+|||++.+..++.++|||||||+||||++ + |...
T Consensus 526 -----------------------------~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 576 (635)
T 4fl3_A 526 -----------------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 576 (635)
T ss_dssp --------------------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred -----------------------------cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 000113356788999999999999999999999999999997 5 4443
Q ss_pred HHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 533 RALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 533 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
.... ....+.....++.....++.+.+|+.+||+.||.+||++.+|++.
T Consensus 577 ~~~~-~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~ 625 (635)
T 4fl3_A 577 KGSE-VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 625 (635)
T ss_dssp CHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred CHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 3222 222233333333344567889999999999999999999999874
No 355
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.95 E-value=1.1e-28 Score=275.79 Aligned_cols=250 Identities=12% Similarity=0.061 Sum_probs=171.0
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ ++.|.||++... ..+..++.|+....... ....++...+...+|++++..+.........
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~---- 79 (296)
T 3uzp_A 11 YRLGRKIGSGSFGDIYLGTDI----AAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDY---- 79 (296)
T ss_dssp EEEEEEEEEETTEEEEEEEET----TTTEEEEEEEEESCSSC---CHHHHHHHHHHHHTTSTTCCCEEEEEEETTE----
T ss_pred EEEEEEEccCCCeEEEEEEEc----CCCcEEEEEEecCCcch---hHHHHHHHHHHHhhcCCCCCccccccCCCCc----
Confidence 4444444 378999999841 12456666665332222 2233445556666777765443222111110
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE---ccCCcE
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL---LQSNQV 368 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill---~~~~~v 368 (1092)
..++|||+ |++|.+++......++..+++.++.||+.||.|||++||+||||||+|||+ +..+.+
T Consensus 80 -----------~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~ 147 (296)
T 3uzp_A 80 -----------NVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 147 (296)
T ss_dssp -----------EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCE
T ss_pred -----------eEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeE
Confidence 11489999 999999998766678999999999999999999999999999999999999 488999
Q ss_pred EEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccc
Q 001366 369 KYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINE 448 (1092)
Q Consensus 369 kl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1092)
||+|||+++.........
T Consensus 148 kl~Dfg~~~~~~~~~~~~-------------------------------------------------------------- 165 (296)
T 3uzp_A 148 YIIDFGLAKKYRDARTHQ-------------------------------------------------------------- 165 (296)
T ss_dssp EECCCTTCEECBCTTTCC--------------------------------------------------------------
T ss_pred EEeeCCCccccccccccc--------------------------------------------------------------
Confidence 999999988755211000
Q ss_pred ccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC
Q 001366 449 VSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR 528 (1092)
Q Consensus 449 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~ 528 (1092)
..+........||+.|+|||.+.+..++.++|||||||+||||+++
T Consensus 166 ----------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g 211 (296)
T 3uzp_A 166 ----------------------------------HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG 211 (296)
T ss_dssp ----------------------------------BCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred ----------------------------------ccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhC
Confidence 0001111256799999999999999999999999999999999986
Q ss_pred ---CCcHH------HHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 ---FDSER------ALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 ---f~~~~------~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|.... ..............+......++.+.+|+.+||+.||.+|||+.+|++.
T Consensus 212 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 274 (296)
T 3uzp_A 212 SLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 274 (296)
T ss_dssp SCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred CCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHH
Confidence 33210 1111111111111111123457889999999999999999999999874
No 356
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.95 E-value=1.3e-28 Score=305.58 Aligned_cols=248 Identities=14% Similarity=0.080 Sum_probs=176.2
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+.+.+ +|.|.||+|.....-. ....++.|+..............++...+...+||||+.++.... +...+
T Consensus 392 y~i~~~LG~G~fG~Vy~a~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~--- 466 (656)
T 2j0j_A 392 IELGRCIGEGQFGDVHQGIYMSPEN-PAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW--- 466 (656)
T ss_dssp EEEEEEEECCSSCCEEEEEECCSSS-CCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE---
T ss_pred EEEeeEEeeCCCEEEEEEEEecCCC-ccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE---
Confidence 4444333 4789999997532100 022334444322222222344456667788889999998776532 11111
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
.+|||++|++|.+++...+..++...++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus 467 -------------lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~ 533 (656)
T 2j0j_A 467 -------------IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 533 (656)
T ss_dssp -------------EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEEC
T ss_pred -------------EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEE
Confidence 3899999999999998777678888999999999999999999999999999999999999999999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++.......
T Consensus 534 DFG~a~~~~~~~~------------------------------------------------------------------- 546 (656)
T 2j0j_A 534 DFGLSRYMEDSTY------------------------------------------------------------------- 546 (656)
T ss_dssp CCCCCCSCCC----------------------------------------------------------------------
T ss_pred ecCCCeecCCCcc-------------------------------------------------------------------
Confidence 9999876441100
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C--
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R-- 528 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~-- 528 (1092)
.......+|+.|+|||.+.+..++.++|||||||+||||++ +
T Consensus 547 -----------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~ 591 (656)
T 2j0j_A 547 -----------------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 591 (656)
T ss_dssp ------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred -----------------------------------eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCC
Confidence 00013456788999999998999999999999999999996 4
Q ss_pred -CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 -FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 -f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|.+...... +..+.....++.....++.+.+|+.+||++||.+|||+.+|++.
T Consensus 592 Pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~ 645 (656)
T 2j0j_A 592 PFQGVKNNDV-IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 645 (656)
T ss_dssp TTTTCCHHHH-HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCHHHH-HHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 443332222 22222222333344567889999999999999999999999874
No 357
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.95 E-value=2.4e-29 Score=295.81 Aligned_cols=170 Identities=15% Similarity=0.098 Sum_probs=134.1
Q ss_pred ccccCCCCCHHHHHh------hcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 306 QGSSDHGVNLREWLN------ARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 306 ~~~~~~GgsL~~~l~------~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
+++...+++|.++++ ..+..++...++.|+.||+.||+|||++||+||||||+||||+.++.+||+|||+++..
T Consensus 182 ~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~ 261 (413)
T 3dzo_A 182 FLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRD 261 (413)
T ss_dssp EEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEET
T ss_pred EEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccceeec
Confidence 455567899999994 22334667688899999999999999999999999999999999999999999998763
Q ss_pred cccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCCCCCCcc
Q 001366 380 LESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTN 459 (1092)
Q Consensus 380 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 459 (1092)
...
T Consensus 262 ~~~----------------------------------------------------------------------------- 264 (413)
T 3dzo_A 262 GAS----------------------------------------------------------------------------- 264 (413)
T ss_dssp TEE-----------------------------------------------------------------------------
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 310
Q ss_pred cccccCCCCCccCCCCCcccccccccccccccccccccccCcccc----------cCCCCCccccchhhhHHHHHHcCC-
Q 001366 460 EHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL----------SGGVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l----------~~~~~t~~sDIwSLGvll~ell~~- 528 (1092)
....+| +.|+|||++ .+..++.++|||||||+||||+++
T Consensus 265 -----------------------------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~ 314 (413)
T 3dzo_A 265 -----------------------------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD 314 (413)
T ss_dssp -----------------------------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSS
T ss_pred -----------------------------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCC
Confidence 114567 889999999 556689999999999999999986
Q ss_pred --CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 529 --FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 529 --f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
|....... .....++ .....++.+.+|+.+||++||.+||++.++|+||||...
T Consensus 315 ~Pf~~~~~~~-----~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~ 370 (413)
T 3dzo_A 315 LPNTDDAALG-----GSEWIFR-SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 370 (413)
T ss_dssp CCCCTTGGGS-----CSGGGGS-SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred CCCCCcchhh-----hHHHHHh-hcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence 43322111 1111111 223457889999999999999999999999999999765
No 358
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.95 E-value=1.3e-28 Score=299.16 Aligned_cols=243 Identities=15% Similarity=0.080 Sum_probs=177.8
Q ss_pred hHHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCC
Q 001366 213 EFFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 213 ~~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
.|.+.+.+ ++.|.||+|...+ ...++.|+...... ......++..++...+|||++.++..... ...+
T Consensus 268 ~~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~-- 337 (535)
T 2h8h_A 268 SLRLEVKLGQGCFGEVWMGTWNG-----TTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY-- 337 (535)
T ss_dssp GEEEEEEEEECSSEEEEEEEETT-----TEEEEEEEECTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE--
T ss_pred hhhhheecccCCCeEEEEEEECC-----CceEEEEEeCCCCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccce--
Confidence 34444444 4789999998744 23456655533222 22344567778888899999987754321 1111
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNA-RGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~-~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
++|||++|++|.++|+. .+..++..+++.|+.||+.||+|||++||+||||||+||||+.++.+|
T Consensus 338 --------------lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~k 403 (535)
T 2h8h_A 338 --------------IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 403 (535)
T ss_dssp --------------EEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEE
T ss_pred --------------EeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEE
Confidence 38999999999999965 334578889999999999999999999999999999999999999999
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
|+|||+++.......
T Consensus 404 l~DFG~a~~~~~~~~----------------------------------------------------------------- 418 (535)
T 2h8h_A 404 VADFGLARLIEDNEY----------------------------------------------------------------- 418 (535)
T ss_dssp ECCTTSTTTCCCHHH-----------------------------------------------------------------
T ss_pred EcccccceecCCCce-----------------------------------------------------------------
Confidence 999999876431000
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC-C
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG-R 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~-~ 528 (1092)
.......++..|+|||++.+..++.++|||||||+||||++ +
T Consensus 419 -------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g 461 (535)
T 2h8h_A 419 -------------------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 461 (535)
T ss_dssp -------------------------------------HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTT
T ss_pred -------------------------------------ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 00012345778999999999999999999999999999998 4
Q ss_pred ---CCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 ---FDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 ---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|....... .+..+......+.....++.+.+||.+||+.||.+|||+.+|++.
T Consensus 462 ~~P~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 517 (535)
T 2h8h_A 462 RVPYPGMVNRE-VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 517 (535)
T ss_dssp CCSSTTCCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 44332222 222222222233334567889999999999999999999999874
No 359
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.95 E-value=1.1e-28 Score=283.53 Aligned_cols=263 Identities=12% Similarity=0.048 Sum_probs=175.0
Q ss_pred HHHhhhc--cccceeeeCCCCCccc----cccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFK----ERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSL 287 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (1092)
|.+.+.+ +|.|.||++....... ..+..++.|+.... ....++..++...+|||++..+.........
T Consensus 44 y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 44 WKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp EEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred EEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 5555555 4789999998642100 01345555554221 2344556667777899988754332211111
Q ss_pred CCCccCCCCCcccc-C--CCcccccCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEc
Q 001366 288 DLGARTGVPASCWI-G--GLRQGSSDHGVNLREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLL 363 (1092)
Q Consensus 288 ~~~~~~~~~~~~~~-~--~~~~~~~~~GgsL~~~l~~~-~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~ 363 (1092)
. ...+..++.. + ..++|||+ |++|.++|... +..++..+++.|+.||+.||.|||++||+||||||+|||++
T Consensus 118 ~---i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~ 193 (352)
T 2jii_A 118 A---IPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVD 193 (352)
T ss_dssp S---CCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEE
T ss_pred C---ccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEc
Confidence 0 0111111111 1 24589999 99999999765 35688889999999999999999999999999999999999
Q ss_pred cCC--cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 364 QSN--QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 364 ~~~--~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
.++ .+||+|||+++.+........
T Consensus 194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~------------------------------------------------------ 219 (352)
T 2jii_A 194 PEDQSQVTLAGYGFAFRYCPSGKHVA------------------------------------------------------ 219 (352)
T ss_dssp TTEEEEEEECCGGGCBCSSGGGCCCC------------------------------------------------------
T ss_pred CCCCceEEEecCcceeeccCCCcccc------------------------------------------------------
Confidence 988 899999999987552110000
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHH
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVL 521 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvl 521 (1092)
..........||+.|+|||.+.+..++.++|||||||+
T Consensus 220 ------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 257 (352)
T 2jii_A 220 ------------------------------------------YVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYC 257 (352)
T ss_dssp ------------------------------------------CCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccccccCCccccCHHHHccCCCCchhhHHHHHHH
Confidence 00001124579999999999999999999999999999
Q ss_pred HHHHcCC---CCcHH----HHHHHHHhccccCC--CC---CCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 522 FFELFGR---FDSER----ALAAAMSDLRDRIL--PP---SFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 522 l~ell~~---f~~~~----~~~~~~~~~~~~~~--p~---~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
||||+++ |.... .............. +. .....++.+.+|+.+||+.||.+||++.+|++.
T Consensus 258 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 330 (352)
T 2jii_A 258 MLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNN 330 (352)
T ss_dssp HHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred HHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHH
Confidence 9999986 43321 11121211111111 11 112457889999999999999999999999874
No 360
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.95 E-value=8.8e-30 Score=285.31 Aligned_cols=239 Identities=14% Similarity=0.082 Sum_probs=150.9
Q ss_pred cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhcc--CCCCCCCccccceecCCCCCCCccCCCCCc
Q 001366 221 KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVAS--NASPKPVGVGTAVVSNGSLDLGARTGVPAS 298 (1092)
Q Consensus 221 ~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (1092)
+|.|.||+|... +..++.|++... ......++..++.. .+|||++.++.......... ..
T Consensus 14 G~~g~V~~~~~~------~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~-----~~--- 75 (303)
T 3gxj_A 14 GRFGEVWRGKWR------GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW-----TQ--- 75 (303)
T ss_dssp CSSSEEEEC-CT------TSCEEEEECC-T----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSS-----EE---
T ss_pred CCCeEEEEEEEc------CcceEEEEeccc----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCcc-----ce---
Confidence 578999999873 456667665322 11222223333333 79999998776654333110 00
Q ss_pred cccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhh--------hcCccccCCCCCCeEEccCCcEEE
Q 001366 299 CWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHH--------TQGVTFLDLKPSSFKLLQSNQVKY 370 (1092)
Q Consensus 299 ~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lH--------s~gIvHrDLKP~Nill~~~~~vkl 370 (1092)
...+|||++|++|.++++.. .++..+++.++.||+.||.||| ++||+||||||+|||++.++.+||
T Consensus 76 ----~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 76 ----LWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp ----EEEEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-B
T ss_pred ----eEEEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEE
Confidence 01389999999999999765 4666689999999999999999 999999999999999999999999
Q ss_pred ecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccccccc
Q 001366 371 IGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVS 450 (1092)
Q Consensus 371 ~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 450 (1092)
+|||+++........
T Consensus 150 ~DFg~a~~~~~~~~~----------------------------------------------------------------- 164 (303)
T 3gxj_A 150 ADLGLAVRHDSATDT----------------------------------------------------------------- 164 (303)
T ss_dssp CCCCC-CCEETTTTE-----------------------------------------------------------------
T ss_pred eecCcceeccCCCcc-----------------------------------------------------------------
Confidence 999998764411000
Q ss_pred CCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC------CCCccccchhhhHHHHH
Q 001366 451 IPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG------VCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~------~~t~~sDIwSLGvll~e 524 (1092)
.........||+.|+|||++.+. .++.++|||||||+|||
T Consensus 165 ----------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~e 210 (303)
T 3gxj_A 165 ----------------------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 210 (303)
T ss_dssp ----------------------------------ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-C
T ss_pred ----------------------------------cccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHH
Confidence 00001145799999999999875 45579999999999999
Q ss_pred HcCCCC----------cHH-------HHHHHHHhccccCCCCCCCC------CChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 525 LFGRFD----------SER-------ALAAAMSDLRDRILPPSFLS------ENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 525 ll~~f~----------~~~-------~~~~~~~~~~~~~~p~~~~~------~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
|+++.. +.. ........+....+.+.++. ..+.+.+|+.+||+.||.+|||+.++++
T Consensus 211 l~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 290 (303)
T 3gxj_A 211 IARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred HHhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence 997511 110 00111111111222222211 1235789999999999999999999987
Q ss_pred h
Q 001366 582 S 582 (1092)
Q Consensus 582 ~ 582 (1092)
.
T Consensus 291 ~ 291 (303)
T 3gxj_A 291 T 291 (303)
T ss_dssp H
T ss_pred H
Confidence 3
No 361
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.95 E-value=1.7e-28 Score=275.93 Aligned_cols=240 Identities=17% Similarity=0.122 Sum_probs=168.7
Q ss_pred hccccceeeeCCCCCcccccccccccccccccc---CchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCccCCC
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTT---MPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGARTGV 295 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1092)
..+|.|.||+|... +..++.|++.... .........++..++...+|||++.++.....+...+
T Consensus 40 g~G~~g~Vy~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~------- 106 (307)
T 2nru_A 40 GEGGFGVVYKGYVN------NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLC------- 106 (307)
T ss_dssp EECSSEEEEEEESS------SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE-------
T ss_pred ccCCCeEEEEEEEC------CceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceE-------
Confidence 34578999999863 3344554442211 1122334456667788889999998776644332222
Q ss_pred CCccccCCCcccccCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecc
Q 001366 296 PASCWIGGLRQGSSDHGVNLREWLNAR--GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGP 373 (1092)
Q Consensus 296 ~~~~~~~~~~~~~~~~GgsL~~~l~~~--~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Df 373 (1092)
.+|+|++|++|.+++... ...++...++.++.||+.||.|||++||+||||||+||+++.++.+|++||
T Consensus 107 ---------lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Df 177 (307)
T 2nru_A 107 ---------LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDF 177 (307)
T ss_dssp ---------EEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCC
T ss_pred ---------EEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeec
Confidence 389999999999999643 345888899999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccCCC
Q 001366 374 IIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSIPH 453 (1092)
Q Consensus 374 g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 453 (1092)
|+++.......
T Consensus 178 g~~~~~~~~~~--------------------------------------------------------------------- 188 (307)
T 2nru_A 178 GLARASEKFAQ--------------------------------------------------------------------- 188 (307)
T ss_dssp TTCEECCSCSS---------------------------------------------------------------------
T ss_pred ccccccccccc---------------------------------------------------------------------
Confidence 99876431000
Q ss_pred CCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC---CC
Q 001366 454 SHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR---FD 530 (1092)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~---f~ 530 (1092)
........||+.|+|||.+.+ .++.++|||||||++|||+++ |.
T Consensus 189 --------------------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~ 235 (307)
T 2nru_A 189 --------------------------------TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVD 235 (307)
T ss_dssp --------------------------------CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBC
T ss_pred --------------------------------cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcc
Confidence 000113568999999998875 589999999999999999986 32
Q ss_pred cHH------HHHHHHHhc-------cccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 531 SER------ALAAAMSDL-------RDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 531 ~~~------~~~~~~~~~-------~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
... ......... ....+++.....++.+.+++.+||+++|.+|||+.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~ 300 (307)
T 2nru_A 236 EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL 300 (307)
T ss_dssp TTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred cCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 211 111111110 0111111111223557899999999999999999999875
No 362
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.95 E-value=5e-28 Score=289.41 Aligned_cols=248 Identities=13% Similarity=0.087 Sum_probs=169.2
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccc-cceecCCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVG-TAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 290 (1092)
|.+.+.+ ++.|.||++... ..+..++.|+........ ...++..++....|++.+..+ .........
T Consensus 9 y~i~~~LG~G~fG~Vy~a~~~----~~~~~vAvK~~~~~~~~~---~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~--- 78 (483)
T 3sv0_A 9 FRLGRKIGSGSFGEIYLGTNI----QTNEEVAIKLENVKTKHP---QLLYESKIYRILQGGTGIPNVRWFGVEGDYN--- 78 (483)
T ss_dssp EECCCCCEECSSCEEEEEEET----TTCCEEEEEEEETTCSSC---CHHHHHHHHHHTTTSTTCCCEEEEEEETTEE---
T ss_pred EEEEEEEeeCCCEEEEEEEEC----CCCcEEEEEEeccccccH---HHHHHHHHHHHhcCCCCCCeEEEEEeeCCEE---
Confidence 4444444 478999999742 124566666543222221 233344455555554444322 221111111
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEE---ccCCc
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKL---LQSNQ 367 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill---~~~~~ 367 (1092)
.++|||+ |++|.+++......++..+++.|+.||+.||+|||++||+||||||+|||| +..+.
T Consensus 79 -------------~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~ 144 (483)
T 3sv0_A 79 -------------VLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQ 144 (483)
T ss_dssp -------------EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTC
T ss_pred -------------EEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCe
Confidence 2479999 999999998777789999999999999999999999999999999999999 68899
Q ss_pred EEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccc
Q 001366 368 VKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDIN 447 (1092)
Q Consensus 368 vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1092)
+||+|||+++.+.......
T Consensus 145 vkL~DFGla~~~~~~~~~~------------------------------------------------------------- 163 (483)
T 3sv0_A 145 VYIIDFGLAKKYRDTSTHQ------------------------------------------------------------- 163 (483)
T ss_dssp EEECCCTTCEECBCTTTCC-------------------------------------------------------------
T ss_pred EEEEeCCcceeccCCcccc-------------------------------------------------------------
Confidence 9999999998755211000
Q ss_pred cccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcC
Q 001366 448 EVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG 527 (1092)
Q Consensus 448 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~ 527 (1092)
..+.......+||+.|+|||.+.+..++.++|||||||+||||++
T Consensus 164 -----------------------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~ellt 208 (483)
T 3sv0_A 164 -----------------------------------HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLR 208 (483)
T ss_dssp -----------------------------------BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHh
Confidence 000111225689999999999999999999999999999999998
Q ss_pred C---CCcH-----HHHHHHHHhcc-ccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhh
Q 001366 528 R---FDSE-----RALAAAMSDLR-DRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581 (1092)
Q Consensus 528 ~---f~~~-----~~~~~~~~~~~-~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~ 581 (1092)
+ |... ......+.... ...++......++++.+|+.+||+++|.+||++.+|++
T Consensus 209 G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 209 GSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp SSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred CCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 6 4321 11111111111 11111112345788999999999999999999999887
No 363
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.95 E-value=2.3e-28 Score=279.02 Aligned_cols=246 Identities=13% Similarity=0.095 Sum_probs=169.3
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhcc--CCCCCCCccccceecCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVAS--NASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
|.+.+.+ ++.|.||+|... +..++.|++... ......++..++.. .+|||++.++..........
T Consensus 44 y~~~~~lg~G~~g~Vy~~~~~------~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~- 112 (342)
T 1b6c_B 44 IVLQESIGKGRFGEVWRGKWR------GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW- 112 (342)
T ss_dssp CEEEEEEEEETTEEEEEEEET------TEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC-
T ss_pred EEEEeeecCCCCcEEEEEEEc------CccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc-
Confidence 4444444 378999999762 455666665322 11222333333333 68999998776654332110
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhh--------hcCccccCCCCCCeE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHH--------TQGVTFLDLKPSSFK 361 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lH--------s~gIvHrDLKP~Nil 361 (1092)
.. ..++|||++|++|.++++.. .++..+++.++.||+.||.||| ++||+||||||+|||
T Consensus 113 ----~~-------~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIl 179 (342)
T 1b6c_B 113 ----TQ-------LWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL 179 (342)
T ss_dssp ----CC-------EEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEE
T ss_pred ----ce-------eEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEE
Confidence 00 11389999999999999765 5788899999999999999999 899999999999999
Q ss_pred EccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCccccc
Q 001366 362 LLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETA 441 (1092)
Q Consensus 362 l~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1092)
++.++.+||+|||+++........
T Consensus 180 l~~~~~~kL~Dfg~~~~~~~~~~~-------------------------------------------------------- 203 (342)
T 1b6c_B 180 VKKNGTCCIADLGLAVRHDSATDT-------------------------------------------------------- 203 (342)
T ss_dssp ECTTSCEEECCCTTCEEEETTTTE--------------------------------------------------------
T ss_pred ECCCCCEEEEECCCceeccccccc--------------------------------------------------------
Confidence 999999999999998765411000
Q ss_pred CccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCC------CCCccccc
Q 001366 442 NESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGG------VCTTSSNI 515 (1092)
Q Consensus 442 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~------~~t~~sDI 515 (1092)
.........||+.|+|||++.+. .++.++||
T Consensus 204 -------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di 240 (342)
T 1b6c_B 204 -------------------------------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 240 (342)
T ss_dssp -------------------------------------------EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHH
T ss_pred -------------------------------------------cccccccCCcCcccCCHhhhcccccccccccCCcccH
Confidence 00011245789999999999875 34479999
Q ss_pred hhhhHHHHHHcCC-------------CCcH----HHHHHHHHhccccCCCCCCC------CCChhHHHHHHhccccCCCC
Q 001366 516 YSLGVLFFELFGR-------------FDSE----RALAAAMSDLRDRILPPSFL------SENPKEAGFCLWQLHPEPLS 572 (1092)
Q Consensus 516 wSLGvll~ell~~-------------f~~~----~~~~~~~~~~~~~~~p~~~~------~~~~~~~~li~~lL~~dP~~ 572 (1092)
|||||+||||+++ |... .........+....+.+.++ ...+.+.+|+.+||+.||.+
T Consensus 241 ~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 320 (342)
T 1b6c_B 241 YAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA 320 (342)
T ss_dssp HHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGG
T ss_pred HHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhh
Confidence 9999999999985 1111 01122222222222222222 12246789999999999999
Q ss_pred CCCHHHHhhh
Q 001366 573 RPTTREILQS 582 (1092)
Q Consensus 573 Rpsa~eiL~~ 582 (1092)
|||+.+|+++
T Consensus 321 Rps~~~i~~~ 330 (342)
T 1b6c_B 321 RLTALRIKKT 330 (342)
T ss_dssp SCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 9999999986
No 364
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=8.5e-26 Score=267.83 Aligned_cols=251 Identities=13% Similarity=0.203 Sum_probs=204.0
Q ss_pred CCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCc---eEEEeecc----------------------------------
Q 001366 828 RSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQ---TVSHYIEH---------------------------------- 870 (1092)
Q Consensus 828 ~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~---~i~~l~~h---------------------------------- 870 (1092)
..++.+++|+++ +++|+++ .++.|++||+.+|+ .+..+..+
T Consensus 4 ~~p~~~v~~s~d-g~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 4 IHPLQNLLTSRD-GSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp ECCCCEEEECSS-SSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred cccEEEEEecCC-CCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 357899999998 6766655 57899999999998 66666533
Q ss_pred --------------------CccEEEEEEecCCCCEE-EEEeCCCcEEEEecC--CCceeeeEe---cCCceEEEEEccC
Q 001366 871 --------------------EKRAWSVDFSQVHPTKL-ASGSDDCSVKLWNIN--EKNSLATIK---NIANVCCVQFSAH 924 (1092)
Q Consensus 871 --------------------~~~V~sv~fsp~~~~~l-aSgs~Dg~I~iWDl~--~~~~l~~l~---~~~~V~sl~fsp~ 924 (1092)
...|++++|+| ++..| ++|+.|++|++||+. ++.++..+. +...|++++|+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED 160 (450)
T ss_dssp ------------------CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCC
Confidence 33699999999 77875 999999999999999 888888874 5688999999999
Q ss_pred CCeEEEEEECCCeEEEEEcCCCCc---ceEEecCCCCCeEEEEEc-C---CCEEEEEECCCeEEEEEcCCCCCCCCCCCc
Q 001366 925 SSHLLAFGSADYRTYCYDLRNARA---PWCVLAGHEKAVSYVKFL-D---SGTLVTASTDNKLKLWDLKRTSHTGPSTNA 997 (1092)
Q Consensus 925 ~~~~latgs~Dg~I~vwDlr~~~~---~~~~l~~H~~~V~~v~fs-~---~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~ 997 (1092)
+. +|++|+.+|.|++||+.+... +...+.+|...|.+++|+ + +.+|++|+.|++|++||+++ +.
T Consensus 161 ~~-~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~--------~~ 231 (450)
T 2vdu_B 161 DT-TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ--------CF 231 (450)
T ss_dssp SS-EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC--------TT
T ss_pred CC-EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC--------Cc
Confidence 95 899999999999999987653 223667899999999999 4 55899999999999999983 44
Q ss_pred eeEE-EcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeecccc-CCCCC----------ccccCCCCCCE
Q 001366 998 CSLT-FSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSI-DPISG----------KETDDDNGLFV 1065 (1092)
Q Consensus 998 ~~~~-l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~-~~i~~----------~~~~~~h~~~V 1065 (1092)
++.. +.+|...|++++|+ ++.+|++|+.|+.|++||+.+++.+..+..+.. ..+.. ..........|
T Consensus 232 ~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 310 (450)
T 2vdu_B 232 IVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAV 310 (450)
T ss_dssp CEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCE
T ss_pred eeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEE
Confidence 5555 55899999999999 999999999999999999999998887764210 00000 00001334679
Q ss_pred EEEEEeCCCCEEEEEe-cCCeEEEEEc
Q 001366 1066 SSVCWRRRSDMVVAAN-SSGCIKVLQM 1091 (1092)
Q Consensus 1066 ~sva~spd~~~Lasgs-~DG~V~vW~l 1091 (1092)
.+++|+|++.+|++++ .|+.|+||++
T Consensus 311 ~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 311 SKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp EEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred EEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 9999999999999999 8999999997
No 365
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.94 E-value=8.2e-28 Score=273.32 Aligned_cols=265 Identities=15% Similarity=0.078 Sum_probs=160.8
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccC-CCCCCCccccceecCCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASN-ASPKPVGVGTAVVSNGSLDLG 290 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 290 (1092)
|.+.+.+ +|.|.||++... ..+..++.|++.... ........++...+... .|||++.++...........
T Consensus 30 y~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~- 103 (337)
T 3ll6_A 30 LRVRRVLAEGGFAFVYEAQDV----GSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD- 103 (337)
T ss_dssp EEEEEEEECCSSEEEEEEEET----TTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST-
T ss_pred EEEEEEEccCCceEEEEEEEC----CCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhccccccccccccc-
Confidence 3344444 478999999852 125566666553322 22223334455556666 49999988776543222110
Q ss_pred ccCCCCCccccCCCcccccCCCCCHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHhhhcC--ccccCCCCCCeEEccCC
Q 001366 291 ARTGVPASCWIGGLRQGSSDHGVNLREWLNA--RGHKGKRIECLYIFRQIVALVDYHHTQG--VTFLDLKPSSFKLLQSN 366 (1092)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~--~~~~~~~~~~~~i~~qil~~l~~lHs~g--IvHrDLKP~Nill~~~~ 366 (1092)
..... ..++|+|+. |+|.+++.. ....++..+++.|+.||+.||+|||++| |+||||||+|||++.++
T Consensus 104 ~~~~~-------~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~ 175 (337)
T 3ll6_A 104 TGQAE-------FLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQG 175 (337)
T ss_dssp TSSEE-------EEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTS
T ss_pred cCCce-------EEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCC
Confidence 00011 124788886 699999965 3345888899999999999999999999 99999999999999999
Q ss_pred cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcccc
Q 001366 367 QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDI 446 (1092)
Q Consensus 367 ~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1092)
.+||+|||+++...........
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~---------------------------------------------------------- 197 (337)
T 3ll6_A 176 TIKLCDFGSATTISHYPDYSWS---------------------------------------------------------- 197 (337)
T ss_dssp CEEBCCCTTCBCCSSCC---------------------------------------------------------------
T ss_pred CEEEecCccceeccccCccccc----------------------------------------------------------
Confidence 9999999999875521100000
Q ss_pred ccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccc---cCCCCCccccchhhhHHHH
Q 001366 447 NEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEEL---SGGVCTTSSNIYSLGVLFF 523 (1092)
Q Consensus 447 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l---~~~~~t~~sDIwSLGvll~ 523 (1092)
..............||+.|+|||++ .+..++.++|||||||+||
T Consensus 198 ---------------------------------~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~ 244 (337)
T 3ll6_A 198 ---------------------------------AQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY 244 (337)
T ss_dssp -----------------------------------------------------------CCTTSCSSHHHHHHHHHHHHH
T ss_pred ---------------------------------ccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHH
Confidence 0000000111245789999999998 5677899999999999999
Q ss_pred HHcCCCCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhh
Q 001366 524 ELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584 (1092)
Q Consensus 524 ell~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~ 584 (1092)
||+++..+...... ...+......+.....++.+.+|+.+||++||.+|||+.|++++..
T Consensus 245 el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 245 LLCFRQHPFEDGAK-LRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp HHHHSSCCC-------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHhCCCCCcchhH-HHhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 99986322221111 1112222222333445678899999999999999999999999854
No 366
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=5.3e-25 Score=254.37 Aligned_cols=263 Identities=10% Similarity=0.040 Sum_probs=212.4
Q ss_pred CEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEE-EEEECCCcEEEEECCCCceEEEeecc
Q 001366 792 DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYL-ASADYDGVVKLWDACTGQTVSHYIEH 870 (1092)
Q Consensus 792 ~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~L-aSgs~DgtV~IWD~~tg~~i~~l~~h 870 (1092)
.++++++.|++|++||+... . ......+...+.+++|+|+ +.+| ++++.|++|++||+.+++.+..+..+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~-------~-~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~ 73 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSN-------K-VTATIPVGSNPMGAVISPD-GTKVYVANAHSNDVSIIDTATNNVIATVPAG 73 (391)
T ss_dssp EEEEEETTTTEEEEEETTTT-------E-EEEEEECSSSEEEEEECTT-SSEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred EEEEEcCCCCEEEEEECCCC-------e-EEEEeecCCCcceEEECCC-CCEEEEECCCCCeEEEEECCCCeEEEEEECC
Confidence 46888999999999998752 1 1222334566999999998 6554 77889999999999999998888765
Q ss_pred CccEEEEEEecCCCCEE-EEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcc
Q 001366 871 EKRAWSVDFSQVHPTKL-ASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAP 949 (1092)
Q Consensus 871 ~~~V~sv~fsp~~~~~l-aSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~ 949 (1092)
. .+.+++|+| ++..| ++++.|+.|++||+.+++.+..+.+...+.+++|+|++..++++++.++.|++||+++++.
T Consensus 74 ~-~v~~~~~sp-dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~- 150 (391)
T 1l0q_A 74 S-SPQGVAVSP-DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV- 150 (391)
T ss_dssp S-SEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-
T ss_pred C-CccceEECC-CCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE-
Confidence 5 899999999 77765 5666789999999999999999888889999999999976668888899999999988753
Q ss_pred eEEecCCCCCeEEEEEc-CCCEE-EEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEe--
Q 001366 950 WCVLAGHEKAVSYVKFL-DSGTL-VTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGS-- 1025 (1092)
Q Consensus 950 ~~~l~~H~~~V~~v~fs-~~~~L-~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs-- 1025 (1092)
...+..| ..+.+++|+ ++.+| ++++.|+.|++||+++ +.+...+. +...+.+++|+|++++|++++
T Consensus 151 ~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~--------~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~ 220 (391)
T 1l0q_A 151 INTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVT--------NSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVD 220 (391)
T ss_dssp EEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT--------TEEEEEEE-CSSEEEEEEECTTSSEEEEEEEC
T ss_pred EEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCC--------CeEEEEEe-cCCCccceEECCCCCEEEEEecC
Confidence 4555544 457999998 55566 6778899999999983 44555554 456789999999999988887
Q ss_pred -cCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEE-EEEecCCeEEEEEc
Q 001366 1026 -ESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMV-VAANSSGCIKVLQM 1091 (1092)
Q Consensus 1026 -~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~L-asgs~DG~V~vW~l 1091 (1092)
.++.|++||...++.+..+.. + ..+.+++|+|+++.| ++++.|+.|++|++
T Consensus 221 ~~~~~v~~~d~~~~~~~~~~~~--------------~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 221 KYFNTVSMIDTGTNKITARIPV--------------G-PDPAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp SSCCEEEEEETTTTEEEEEEEC--------------C-SSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred cCCCcEEEEECCCCeEEEEEec--------------C-CCccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 689999999998877766542 1 247899999999977 67788999999996
No 367
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.94 E-value=1.7e-27 Score=267.18 Aligned_cols=229 Identities=20% Similarity=0.196 Sum_probs=160.0
Q ss_pred hHHHh-h--hccccceeeeCCCCCccccccccccccccccccCchhhHhhhhhh-hhhccCCCCCCCccccceecCCCCC
Q 001366 213 EFFVK-T--TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGA-MMVASNASPKPVGVGTAVVSNGSLD 288 (1092)
Q Consensus 213 ~~~~~-~--~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1092)
.|.+. + ..+|.|.||++... ..+..++.|+.... ....++. .+.....|||++.+++........
T Consensus 18 ~y~~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~- 86 (299)
T 3m2w_A 18 DYKVTSQVLGLGINGKVLQIFNK----RTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAG- 86 (299)
T ss_dssp TEEEEEEEEEEETTEEEEEEEET----TTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT-
T ss_pred chhhcCcccccCCCeEEEEEEEc----CCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCC-
Confidence 45554 2 44578999999752 22556666665221 1122222 233667999999876654320000
Q ss_pred CCccCCCCCccccCCCcccccCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEcc---
Q 001366 289 LGARTGVPASCWIGGLRQGSSDHGVNLREWLNARG-HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQ--- 364 (1092)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~-~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~--- 364 (1092)
... ..++|||++|++|.+++...+ ..++..+++.++.||+.||.|||++||+||||||+||+++.
T Consensus 87 ----~~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~ 155 (299)
T 3m2w_A 87 ----RKC-------LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP 155 (299)
T ss_dssp ----EEE-------EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSST
T ss_pred ----Cce-------EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCC
Confidence 000 113899999999999997754 46888899999999999999999999999999999999998
Q ss_pred CCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCcc
Q 001366 365 SNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANES 444 (1092)
Q Consensus 365 ~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (1092)
++.+|++|||+++...
T Consensus 156 ~~~~kl~Dfg~a~~~~---------------------------------------------------------------- 171 (299)
T 3m2w_A 156 NAILKLTDFGFAKETT---------------------------------------------------------------- 171 (299)
T ss_dssp TCCEEECCCTTCEECT----------------------------------------------------------------
T ss_pred CCcEEEeccccccccc----------------------------------------------------------------
Confidence 7889999999775422
Q ss_pred ccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHH
Q 001366 445 DINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFE 524 (1092)
Q Consensus 445 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~e 524 (1092)
+..++.++|||||||+|||
T Consensus 172 -------------------------------------------------------------~~~~~~~~DiwslG~il~e 190 (299)
T 3m2w_A 172 -------------------------------------------------------------GEKYDKSCDMWSLGVIMYI 190 (299)
T ss_dssp -------------------------------------------------------------TCGGGGHHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------cccCCchhhHHHHHHHHHH
Confidence 1346789999999999999
Q ss_pred HcCC---CCcHHHHHHHHHhccccCC------C-CCCCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhhh
Q 001366 525 LFGR---FDSERALAAAMSDLRDRIL------P-PSFLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEFQ 589 (1092)
Q Consensus 525 ll~~---f~~~~~~~~~~~~~~~~~~------p-~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~~ 589 (1092)
|+++ |......... ........ | +.+...++.+.+|+.+||++||.+|||+.|+|+||||....
T Consensus 191 l~tg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 191 LLCGYPPFYSNHGLAIS-PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264 (299)
T ss_dssp HHHSSCSCCC--------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred HHHCCCCCCCCcchhhh-HHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence 9986 4333222211 11111111 1 11245678899999999999999999999999999998754
No 368
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=1.9e-25 Score=256.75 Aligned_cols=241 Identities=11% Similarity=0.128 Sum_probs=187.3
Q ss_pred ecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEE-EEEeCCCcEEEEecCC
Q 001366 825 MSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKL-ASGSDDCSVKLWNINE 903 (1092)
Q Consensus 825 ~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~l-aSgs~Dg~I~iWDl~~ 903 (1092)
..|...|.+++|+|+ +.+|++|+.|+ ++|||+.+++.+..... ..+..+++.+ +++.+ ++|+.|++|++||+.+
T Consensus 16 ~~h~~~V~~v~fs~d-g~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQD-QSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLH-RTNYVAFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp ---CCCCCEEEECTT-SSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECT-TSSEEEEECSSTTEEEEEETTT
T ss_pred ccCCCceEEEEECCC-CCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcC-CCCEEEEEECCccEEEEEECCC
Confidence 458899999999998 88999988765 78999988776655432 2477888888 55555 6788899999999999
Q ss_pred CceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEE--EECCCeEE
Q 001366 904 KNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVT--ASTDNKLK 981 (1092)
Q Consensus 904 ~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~S--gs~Dg~I~ 981 (1092)
++++..+.+...|.+++|+++. ++++ .|+.|++||+.+....+..+.. ....+++++ ..++. |+.||.|+
T Consensus 91 ~~~~~~~~~~~~v~~v~~~~~~---~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~-~~la~~sg~~~g~v~ 162 (355)
T 3vu4_A 91 KQDVSRIKVDAPVKDLFLSREF---IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN-GLLVYSNEFNLGQIH 162 (355)
T ss_dssp TEEEEEEECSSCEEEEEECSSE---EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET-TEEEEEESSCTTCEE
T ss_pred CcEEEEEECCCceEEEEEcCCE---EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc-cEEEEeCCCcCcEEE
Confidence 9999999998999999999864 3333 4889999999987223333332 334445555 66665 57899999
Q ss_pred EEEcCCCCCCCCCCC-------c-eeEEEcCCCCCeEEEEEecCCCEEEEEecCCc-EEEEeCCCCCceeeeeccccCCC
Q 001366 982 LWDLKRTSHTGPSTN-------A-CSLTFSGHTNEKNFVGLSTADGYIACGSESNE-VYAYHRSLPMPITSYKFGSIDPI 1052 (1092)
Q Consensus 982 vWDl~~~~~~~~~~~-------~-~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~-I~Iwd~~~~~~i~~~~~~~~~~i 1052 (1092)
+||+.+......... . ++..+.+|...|++++|+|+|.+||+|+.|++ |+|||+.+++.+..+.
T Consensus 163 iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~------- 235 (355)
T 3vu4_A 163 ITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFR------- 235 (355)
T ss_dssp EEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEE-------
T ss_pred EEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE-------
Confidence 999985321100000 1 26789999999999999999999999999998 9999999998887664
Q ss_pred CCccccCC-CCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1053 SGKETDDD-NGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1053 ~~~~~~~~-h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.+ |...|++++|+|++.+|++++.||.|+||++
T Consensus 236 ------~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 236 ------RGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp ------CTTCCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred ------cCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 23 7789999999999999999999999999996
No 369
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=1.8e-26 Score=269.17 Aligned_cols=243 Identities=8% Similarity=-0.003 Sum_probs=171.2
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEec--------CCCCEEEEEEC
Q 001366 778 SANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNN--------YIKNYLASADY 849 (1092)
Q Consensus 778 h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp--------~~~~~LaSgs~ 849 (1092)
|...+....+.+++.+||+|+.|++|+|||...... ..........+|...|++|+|+| + +++|||||.
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~--~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d-~~~las~s~ 164 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETI--ITQHVLGGKSGHHNFVNDIDIADVYSADNRLA-EQVIASVGD 164 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEE--EEEEEECTTTSCSSCEEEEEEEEEECTTCSEE-EEEEEEEET
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCcc--ceeeeecccCCCCCceEEEEEccccccccCCC-CCEEEEEEC
Confidence 333344444455677899999999999999875211 11111123457999999999997 4 789999999
Q ss_pred CCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeE-------------------
Q 001366 850 DGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATI------------------- 910 (1092)
Q Consensus 850 DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l------------------- 910 (1092)
|++|+|||+.++..+..+.+|...|.+++|+|.++.+|++|+.|++|++||+++++.....
T Consensus 165 D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~ 244 (393)
T 4gq1_A 165 DCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPL 244 (393)
T ss_dssp TSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGG
T ss_pred CCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccc
Confidence 9999999999988888888899999999999955568999999999999999987643322
Q ss_pred -------ecCCceEEEEEc-cCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeE-------------------EE
Q 001366 911 -------KNIANVCCVQFS-AHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVS-------------------YV 963 (1092)
Q Consensus 911 -------~~~~~V~sl~fs-p~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~-------------------~v 963 (1092)
.+...+.++.|+ |++ ..+++++.|+.+++||+..... ...+..|...+. .+
T Consensus 245 ~~~~~~~~~~~~v~~v~~~~~dg-~~l~s~s~d~~i~vwd~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (393)
T 4gq1_A 245 VNTCHSSGIASSLANVRWIGSDG-SGILAMCKSGAWLRWNLFANND-YNEISDSTMKLGPKNLLPNVQGISLFPSLLGAC 322 (393)
T ss_dssp C------CCSSSCSEEEEETTTT-CEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCE
T ss_pred eeeeecccccccceeeeeecCCC-CEEEEEeCCCCEEEEECccCCC-CceEeeecCccccEEEccccccccccCcceeEE
Confidence 134568889987 666 5899999999999999986543 222333333222 22
Q ss_pred EEc-CCC-EEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEe
Q 001366 964 KFL-DSG-TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYH 1034 (1092)
Q Consensus 964 ~fs-~~~-~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd 1034 (1092)
.+. .++ ++++|+.||+|+|||+.+ +.+...+.+|...|++++|+|||++||+++.+| +.+|.
T Consensus 323 ~~~~~~~~~~~sgs~Dg~V~lwd~~~--------~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvr 386 (393)
T 4gq1_A 323 PHPRYMDYFATAHSQHGLIQLINTYE--------KDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTR 386 (393)
T ss_dssp ECSSCTTEEEEEETTTTEEEEEETTC--------TTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEE
T ss_pred EccCCCCEEEEEECCCCEEEEEECCC--------CcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEE
Confidence 222 233 567788999999999984 455667778889999999999999999999877 55554
No 370
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.94 E-value=1.6e-28 Score=280.44 Aligned_cols=166 Identities=14% Similarity=0.068 Sum_probs=129.1
Q ss_pred cccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhh-hcCccccCCCCCCeEEccCC-----------------
Q 001366 305 RQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHH-TQGVTFLDLKPSSFKLLQSN----------------- 366 (1092)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lH-s~gIvHrDLKP~Nill~~~~----------------- 366 (1092)
++||||+||+|.+.+.. ..++..+++.|++||+.||+||| ++||+||||||+||||+.++
T Consensus 139 lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~ 216 (336)
T 2vuw_A 139 IVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPS 216 (336)
T ss_dssp EEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEEC
T ss_pred EEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccC
Confidence 48999999987777754 35788899999999999999999 99999999999999999887
Q ss_pred ---cEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCc
Q 001366 367 ---QVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANE 443 (1092)
Q Consensus 367 ---~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1092)
.+||+|||+++...+
T Consensus 217 ~~~~vkL~DFG~a~~~~~-------------------------------------------------------------- 234 (336)
T 2vuw_A 217 CGLQVSIIDYTLSRLERD-------------------------------------------------------------- 234 (336)
T ss_dssp TTEEEEECCCTTCBEEET--------------------------------------------------------------
T ss_pred CCceEEEeeccccEecCC--------------------------------------------------------------
Confidence 899999999876431
Q ss_pred cccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHH-H
Q 001366 444 SDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVL-F 522 (1092)
Q Consensus 444 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvl-l 522 (1092)
...+||+.|+|||++.+.. +.++||||||++ +
T Consensus 235 ----------------------------------------------~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~ 267 (336)
T 2vuw_A 235 ----------------------------------------------GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKEN 267 (336)
T ss_dssp ----------------------------------------------TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHH
T ss_pred ----------------------------------------------CcEEEeecccChhhhcCCC-ccceehhhhhCCCC
Confidence 0347899999999998766 999999998777 7
Q ss_pred HHHcCCCCcHHHHH---HHHHh-c---cccCC--CCCCCCCChhHHHHHHhccccCCCCCCCHHHHh-hhhhhh
Q 001366 523 FELFGRFDSERALA---AAMSD-L---RDRIL--PPSFLSENPKEAGFCLWQLHPEPLSRPTTREIL-QSEVTN 586 (1092)
Q Consensus 523 ~ell~~f~~~~~~~---~~~~~-~---~~~~~--p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL-~~~~~~ 586 (1092)
+++++++.+..... ..... . ..... ++.+...++++.+||.+||++| |++|+| +||||+
T Consensus 268 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 268 NNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp TTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred cccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence 77887766654321 11111 1 11111 1112234677899999999976 999999 999984
No 371
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.94 E-value=5e-28 Score=302.64 Aligned_cols=242 Identities=20% Similarity=0.213 Sum_probs=175.0
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCchhhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPSDAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
|.+...+ +|+|+||++.... ..+..++.|++.............++..++...+||||+.++..........
T Consensus 82 y~i~~~lg~G~~g~Vy~a~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~--- 155 (681)
T 2pzi_A 82 YEVKGCIAHGGLGWIYLALDRN---VNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG--- 155 (681)
T ss_dssp EEEEEEEEEETTEEEEEEEEGG---GTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS---
T ss_pred eEEEEEEeeCCCeEEEEEEEcC---CCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC---
Confidence 4454444 5889999997521 0144566665543333333345567777888899999999877655433210
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
.+.. .++|||++|++|.+++.. .++..+++.|+.||+.||+|||++||+||||||+||||+. +.+||+
T Consensus 156 ---~~~~-----~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~-~~~kl~ 223 (681)
T 2pzi_A 156 ---DPVG-----YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE-EQLKLI 223 (681)
T ss_dssp ---CEEE-----EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS-SCEEEC
T ss_pred ---Ccee-----EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeC-CcEEEE
Confidence 0000 148999999999998865 5788899999999999999999999999999999999987 489999
Q ss_pred cccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccccC
Q 001366 372 GPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEVSI 451 (1092)
Q Consensus 372 Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 451 (1092)
|||+++....
T Consensus 224 DFG~a~~~~~---------------------------------------------------------------------- 233 (681)
T 2pzi_A 224 DLGAVSRINS---------------------------------------------------------------------- 233 (681)
T ss_dssp CCTTCEETTC----------------------------------------------------------------------
T ss_pred ecccchhccc----------------------------------------------------------------------
Confidence 9998876331
Q ss_pred CCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCCCCc
Q 001366 452 PHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDS 531 (1092)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~ 531 (1092)
....+||+.|+|||++.+. ++.++|||||||+||||++++.+
T Consensus 234 -------------------------------------~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~ 275 (681)
T 2pzi_A 234 -------------------------------------FGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPT 275 (681)
T ss_dssp -------------------------------------CSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCE
T ss_pred -------------------------------------CCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCC
Confidence 0145689999999998765 48999999999999999998665
Q ss_pred HHHHHHHHHhccccCCCCC--CCCCChhHHHHHHhccccCCCCCCCHHHHhhhhhhhhh
Q 001366 532 ERALAAAMSDLRDRILPPS--FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNEF 588 (1092)
Q Consensus 532 ~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~~~~~~~ 588 (1092)
... ... ..++.. ....++.+.+||.+||++||.+||++.+.+.++|+...
T Consensus 276 ~~~------~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 276 RNG------RYV-DGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp ETT------EEC-SSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred Ccc------ccc-ccccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 432 011 111111 11234678899999999999999999999999987643
No 372
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.7e-26 Score=258.58 Aligned_cols=223 Identities=11% Similarity=0.061 Sum_probs=180.8
Q ss_pred CCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecC---------CCceeeeEe
Q 001366 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN---------EKNSLATIK 911 (1092)
Q Consensus 841 ~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~---------~~~~l~~l~ 911 (1092)
+.+|++|+.||+|++||+.+++.+..+. ...|.++.|+| . +++|+.|++|++|+.. +++.+..+.
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~-~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~ 121 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHP-A---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE 121 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCC-S---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCC-c---eEEecCCCeEEEEEccCceEEeecCCcceeEEee
Confidence 6799999999999999999999888876 56788889988 3 9999999999999765 455455554
Q ss_pred --cCCceEEEEEcc--CCCeEEEEEECCCeEEEEEcCCCCcceEEe-cCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEc
Q 001366 912 --NIANVCCVQFSA--HSSHLLAFGSADYRTYCYDLRNARAPWCVL-AGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDL 985 (1092)
Q Consensus 912 --~~~~V~sl~fsp--~~~~~latgs~Dg~I~vwDlr~~~~~~~~l-~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl 985 (1092)
+...|.+++|+| ++. ++++|+.||.|++||+++++. .... ..|...|.+++|+ ++.+|++|+.||.|++||+
T Consensus 122 ~~~~~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~~~-~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~ 199 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDDSQ-YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNL 199 (343)
T ss_dssp CCCSSCEEEEECCC---CC-EEEEEETTCCEEEEESSSSCE-EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEES
T ss_pred cCCCCCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCCcE-EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 446799999999 885 899999999999999998765 3444 4566689999999 6678999999999999999
Q ss_pred CCCCCCCCCCCcee-EEEcC-CCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCC
Q 001366 986 KRTSHTGPSTNACS-LTFSG-HTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGL 1063 (1092)
Q Consensus 986 ~~~~~~~~~~~~~~-~~l~~-h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~ 1063 (1092)
++. ... ..+.+ |...|++++|+|+|.+|++|+ |+.|++||+..+..+..+.. . ..|..
T Consensus 200 ~~~--------~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~-----~------~~~~~ 259 (343)
T 3lrv_A 200 SSP--------DQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPT-----Y------TIPEF 259 (343)
T ss_dssp SCT--------TSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCC-----C------BC---
T ss_pred CCC--------CCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecc-----c------ccccc
Confidence 843 334 66777 999999999999999999999 45999999988776554320 0 11222
Q ss_pred CE--EEEEEeCCCCEEEEEec-CCeEEEEEc
Q 001366 1064 FV--SSVCWRRRSDMVVAANS-SGCIKVLQM 1091 (1092)
Q Consensus 1064 ~V--~sva~spd~~~Lasgs~-DG~V~vW~l 1091 (1092)
.+ .+++|+|++.+|++++. |+.|+||++
T Consensus 260 ~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 260 KTGTVTYDIDDSGKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp --CCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cccceEEEECCCCCEEEEecCCCCcEEEEEE
Confidence 23 57999999999999998 999999986
No 373
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=7.7e-25 Score=245.83 Aligned_cols=185 Identities=16% Similarity=0.256 Sum_probs=149.0
Q ss_pred CCEEEEEE--CCCcEEEEEC-CCCceEEEeeccCccEEEEEEecC--CCCEEEEEeCCCcEEEEecCCCceeeeEec---
Q 001366 841 KNYLASAD--YDGVVKLWDA-CTGQTVSHYIEHEKRAWSVDFSQV--HPTKLASGSDDCSVKLWNINEKNSLATIKN--- 912 (1092)
Q Consensus 841 ~~~LaSgs--~DgtV~IWD~-~tg~~i~~l~~h~~~V~sv~fsp~--~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~--- 912 (1092)
++++.+++ .|++|++|++ .+|+.+..+.+|...+..++|++. ++..|+|||.|++|+|||+.+++++.++..
T Consensus 145 g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~ 224 (356)
T 2w18_A 145 RRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS 224 (356)
T ss_dssp TEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC-
T ss_pred CcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCc
Confidence 55555543 6999999999 558888999999999999999884 568999999999999999999999999973
Q ss_pred -CCceEEEEEccCCCeE-----------EEEEECCCeEEEEEcCCCCcceEEe-----cCCCCCeEEEEEcCCCEEEEEE
Q 001366 913 -IANVCCVQFSAHSSHL-----------LAFGSADYRTYCYDLRNARAPWCVL-----AGHEKAVSYVKFLDSGTLVTAS 975 (1092)
Q Consensus 913 -~~~V~sl~fsp~~~~~-----------latgs~Dg~I~vwDlr~~~~~~~~l-----~~H~~~V~~v~fs~~~~L~Sgs 975 (1092)
...+++++|+|++..+ +++|+.|++|++||..+++. +.++ .+|...+.+..++ +..+++++
T Consensus 225 ~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~-l~v~~~~~p~Gh~~~~lsg~~s-g~~lASgS 302 (356)
T 2w18_A 225 YQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLS-VGVMLYCLPPGQAGRFLEGDVK-DHCAAAIL 302 (356)
T ss_dssp --CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEE-EEEEEECCCTTCCCCEEEEEEE-TTEEEEEE
T ss_pred ceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEE-EEEEEeeccCCCcceeEccccC-CCEEEEEc
Confidence 2468889999998532 36788999999999988754 3332 4777666655554 77899999
Q ss_pred CCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeE-EEEEecCCCEEEEEecCCcEEEEeC
Q 001366 976 TDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKN-FVGLSTADGYIACGSESNEVYAYHR 1035 (1092)
Q Consensus 976 ~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~-~v~~spdg~~lasgs~Dg~I~Iwd~ 1035 (1092)
.|++|+|||+. ++.++.++.+|...+. +++|||||++|++|+.|++|+|||.
T Consensus 303 ~DgTIkIWDl~--------tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 303 TSGTIAIWDLL--------LGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTSCEEEEETT--------TCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCcEEEEECC--------CCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 99999999998 5778999999988765 5899999999999999999999984
No 374
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=2.3e-23 Score=253.46 Aligned_cols=320 Identities=12% Similarity=0.079 Sum_probs=243.2
Q ss_pred EeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEc--CCCCCCCcccccceeeec
Q 001366 749 GAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEF--NALFNDSVDVYYPAVEMS 826 (1092)
Q Consensus 749 ~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~--~~~~~~~~~~~~~~~~~~ 826 (1092)
+...|+++.+|+....++...+.. ++. +.+++|+|||++|++++.|++|.+||+ .+. .......
T Consensus 154 s~~~d~~V~v~D~~t~~~~~~i~~----g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~--------~~~~~i~ 219 (543)
T 1nir_A 154 TLRDAGQIALVDGDSKKIVKVIDT----GYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEP--------TKVAEIK 219 (543)
T ss_dssp EEGGGTEEEEEETTTCCEEEEEEC----STT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSC--------EEEEEEE
T ss_pred EEcCCCeEEEEECCCceEEEEEec----Ccc--cceEEECCCCCEEEEECCCCeEEEEECcCCCC--------cEEEEEe
Confidence 456789999999988887766552 333 889999999999999999999999998 331 1112233
Q ss_pred CCCCeEEEEEec----CCCCEEEEEE-CCCcEEEEECCCCceEEEeec----------cCc-cEEEEEEecCCCCEEEEE
Q 001366 827 NRSKLSCVCWNN----YIKNYLASAD-YDGVVKLWDACTGQTVSHYIE----------HEK-RAWSVDFSQVHPTKLASG 890 (1092)
Q Consensus 827 h~~~V~~v~~sp----~~~~~LaSgs-~DgtV~IWD~~tg~~i~~l~~----------h~~-~V~sv~fsp~~~~~laSg 890 (1092)
+...+.+++|+| + +++|++++ .+++|.|||..+++++.++.. |.. .+.++.++|.++.++++.
T Consensus 220 ~g~~p~~va~sp~~~~d-g~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 220 IGIEARSVESSKFKGYE-DRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp CCSEEEEEEECCSTTCT-TTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred cCCCcceEEeCCCcCCC-CCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence 456789999999 8 78888877 489999999999999888764 223 789999999666778888
Q ss_pred eCCCcEEEEecCCCceee--eEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecC----CCCCeEEEE
Q 001366 891 SDDCSVKLWNINEKNSLA--TIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAG----HEKAVSYVK 964 (1092)
Q Consensus 891 s~Dg~I~iWDl~~~~~l~--~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~----H~~~V~~v~ 964 (1092)
..++.|.+||+.+.+.+. ++.+...+..+.|+|++..+++++..+++|.+||+.+++. +..+.. |......+.
T Consensus 299 ~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l-~~~i~~g~~ph~g~g~~~~ 377 (543)
T 1nir_A 299 KETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL-SALVDVGKTPHPGRGANFV 377 (543)
T ss_dssp TTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE-EEEEECSSSBCCTTCEEEE
T ss_pred CCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE-EEeeccCCCCCCCCCcccC
Confidence 899999999999877655 5566677889999999976666667799999999998763 444442 654444443
Q ss_pred EcCCC-EEEEEE-CCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEe-------cCCcEEEEeC
Q 001366 965 FLDSG-TLVTAS-TDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGS-------ESNEVYAYHR 1035 (1092)
Q Consensus 965 fs~~~-~L~Sgs-~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs-------~Dg~I~Iwd~ 1035 (1092)
..+++ .++|++ .|++|.|||+.+.... ....+++.++.+|...+.+|+++|+|++|++++ .+++|.|||+
T Consensus 378 ~p~~g~~~~s~~~~d~~V~v~d~~~~~~~-~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~ 456 (543)
T 1nir_A 378 HPKYGPVWSTSHLGDGSISLIGTDPKNHP-QYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDL 456 (543)
T ss_dssp ETTTEEEEEEEBSSSSEEEEEECCTTTCT-TTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEET
T ss_pred CCCCccEEEeccCCCceEEEEEeCCCCCc-hhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEEC
Confidence 23434 456665 5899999999852111 112678999999998999999999999999987 3779999999
Q ss_pred CCCCce-eeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEec-----CCeEEEEEc
Q 001366 1036 SLPMPI-TSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANS-----SGCIKVLQM 1091 (1092)
Q Consensus 1036 ~~~~~i-~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~-----DG~V~vW~l 1091 (1092)
.+++.+ ..+..+.+. -...+...|..++|+|+|+.|..+.. |+.|.|||.
T Consensus 457 ~~~~~~~~~~~v~~~~------~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~ 512 (543)
T 1nir_A 457 KNLDAKYQVLPIAEWA------DLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDD 512 (543)
T ss_dssp TCTTSCCEEECHHHHH------CCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEET
T ss_pred CCCCCCeEEeechhhc------ccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEEC
Confidence 988866 333322111 11345678999999999999987743 799999984
No 375
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=1.1e-23 Score=246.89 Aligned_cols=274 Identities=11% Similarity=0.121 Sum_probs=220.6
Q ss_pred cCCCCcE--EeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccc
Q 001366 742 QNPTDRL--GAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVY 819 (1092)
Q Consensus 742 ~~~~~~l--~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~ 819 (1092)
++|++.+ ....|+.+.+|+....+.........+.+|...|.+++|++++.++++++.|+.|++||+... .
T Consensus 130 ~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~-------~ 202 (433)
T 3bws_A 130 FIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL-------A 202 (433)
T ss_dssp ESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC-------C
T ss_pred EeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc-------e
Confidence 3454444 334577899999987776654444456789999999999999999999999999999998652 1
Q ss_pred cceeeecCCCCeEEEEEecCCCCEE-EEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEe-------
Q 001366 820 YPAVEMSNRSKLSCVCWNNYIKNYL-ASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGS------- 891 (1092)
Q Consensus 820 ~~~~~~~h~~~V~~v~~sp~~~~~L-aSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs------- 891 (1092)
.......|...+.+++|+|+ +..+ ++++.|++|++||+.+++.+..+..+ ..+.+++|+| ++..+++++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~-~g~~l~~~~~~~~~~~ 279 (433)
T 3bws_A 203 YKATVDLTGKWSKILLYDPI-RDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSK-DGKELYIAQFSASNQE 279 (433)
T ss_dssp EEEEEECSSSSEEEEEEETT-TTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECT-TSSEEEEEEEESCTTC
T ss_pred EEEEEcCCCCCeeEEEEcCC-CCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcC-CCCEEEEEECCCCccc
Confidence 11223357889999999998 5555 56668999999999999988888754 4589999999 888888888
Q ss_pred -CCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCC
Q 001366 892 -DDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSG 969 (1092)
Q Consensus 892 -~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~ 969 (1092)
.|+.|++||+++++.+..+.+...+.+++|+|++..++++++.|+.|++||+.+.+. ...+. +...+.+++|+ ++.
T Consensus 280 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~-~~~~~-~~~~~~~~~~s~dg~ 357 (433)
T 3bws_A 280 SGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKV-QKSIP-VFDKPNTIALSPDGK 357 (433)
T ss_dssp SCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEE-EEEEE-CSSSEEEEEECTTSS
T ss_pred cCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcE-EEEec-CCCCCCeEEEcCCCC
Confidence 488999999999998888877778999999999987888889999999999997653 34443 67789999999 556
Q ss_pred EEEEEEC---------------CCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEec-CCcEEEE
Q 001366 970 TLVTAST---------------DNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSE-SNEVYAY 1033 (1092)
Q Consensus 970 ~L~Sgs~---------------Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~-Dg~I~Iw 1033 (1092)
+|++++. ||.|++||+. .+..+..+.. ...+.+++|+|+|++|++++. |+.|++|
T Consensus 358 ~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~--------~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~ 428 (433)
T 3bws_A 358 YLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT--------TDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVY 428 (433)
T ss_dssp EEEEEECCCCCTTTCTTSCCSSCCEEEEEETT--------TTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEE
T ss_pred EEEEEecCCCccccccccccccceEEEEEECC--------CCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEE
Confidence 7887776 5799999998 3455666665 457899999999999988775 9999999
Q ss_pred eCC
Q 001366 1034 HRS 1036 (1092)
Q Consensus 1034 d~~ 1036 (1092)
++.
T Consensus 429 ~~~ 431 (433)
T 3bws_A 429 RRD 431 (433)
T ss_dssp EET
T ss_pred Eec
Confidence 865
No 376
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.92 E-value=2.2e-22 Score=225.92 Aligned_cols=275 Identities=10% Similarity=0.001 Sum_probs=186.9
Q ss_pred CEEEEEEcCCCC---EEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEE-EE
Q 001366 781 VICSISFDRDED---HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK-LW 856 (1092)
Q Consensus 781 ~V~sl~fspdg~---~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~-IW 856 (1092)
.|+++.|-.-|- .+++++. ..|++|+.... ...........|..+|..|.+.|+..+++..+=..=.++ ++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~ 115 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACE-DVVSLWKALDA----WQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIR 115 (356)
T ss_dssp EEEEEEEC----CEEEEEEEES-SEEEEEEESSS----SBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEE
T ss_pred EEeeeeeccCCCCccEEEEecc-ceEEEcccCCC----ccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceE
Confidence 356666655443 6777774 58999998752 122334455677889999999997555554443221111 22
Q ss_pred ECC--C-----CceEEEeeccCccEEEEEEecCCCCEEEEEe--CCCcEEEEecC-CCceeeeEe-cCCceEEEEEcc--
Q 001366 857 DAC--T-----GQTVSHYIEHEKRAWSVDFSQVHPTKLASGS--DDCSVKLWNIN-EKNSLATIK-NIANVCCVQFSA-- 923 (1092)
Q Consensus 857 D~~--t-----g~~i~~l~~h~~~V~sv~fsp~~~~~laSgs--~Dg~I~iWDl~-~~~~l~~l~-~~~~V~sl~fsp-- 923 (1092)
-+. . ++.+.. .+|...|+++ + +++++.+++ .|+.|++|++. +++.+..+. +...+..++|+|
T Consensus 116 sla~spd~~~~~~~l~s-~g~~~~v~~l---~-~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~ 190 (356)
T 2w18_A 116 ALFCSSDDESEKQVLLK-SGNIKAVLGL---T-KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQ 190 (356)
T ss_dssp EECC------CCEEEEE-EEEEEEEEEE---T-TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEE
T ss_pred EEEECCCccccccEEEe-CCCeEEEEec---C-CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccC
Confidence 211 1 122222 4566667665 4 565555544 59999999994 477777665 667788888888
Q ss_pred -CCCeEEEEEECCCeEEEEEcCCCCcceEEecCCC---CCeEEEEEcC-CCEE------------EEEECCCeEEEEEcC
Q 001366 924 -HSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHE---KAVSYVKFLD-SGTL------------VTASTDNKLKLWDLK 986 (1092)
Q Consensus 924 -~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~---~~V~~v~fs~-~~~L------------~Sgs~Dg~I~vWDl~ 986 (1092)
++ .+|++|+.|++|+|||+.+++. +.++.+|. ..|.+++|++ +.++ ++|+.|++|++||..
T Consensus 191 g~~-~~LaSgS~D~TIkIWDl~TGk~-l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 191 GMQ-EALLGTTIMNNIVIWNLKTGQL-LKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp TST-TEEEEEETTSEEEEEETTTCCE-EEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT
T ss_pred CCC-ceEEEecCCCcEEEEECCCCcE-EEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 55 4999999999999999998864 56676543 3677788984 4443 678899999999998
Q ss_pred CCCCCCCCCCceeEEE-----cCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCC
Q 001366 987 RTSHTGPSTNACSLTF-----SGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDN 1061 (1092)
Q Consensus 987 ~~~~~~~~~~~~~~~l-----~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h 1061 (1092)
+ +.++..+ .+|...+.+..+ ++.++|+|+.|++|+|||+.+++.+.++. +|
T Consensus 269 t--------gk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~--------------gH 324 (356)
T 2w18_A 269 T--------TLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLP--------------PV 324 (356)
T ss_dssp T--------TEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEEC--------------CC
T ss_pred C--------CEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEec--------------CC
Confidence 3 4444444 467666544444 48899999999999999999999887653 45
Q ss_pred CCC-EEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1062 GLF-VSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1062 ~~~-V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
... +.+++|+|||++|+||+.|++|+||++
T Consensus 325 ~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 325 SDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp --CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 444 456899999999999999999999996
No 377
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.91 E-value=1.9e-25 Score=249.39 Aligned_cols=215 Identities=11% Similarity=0.045 Sum_probs=154.8
Q ss_pred HHHhhhc--cccceeeeCCCCCccccccccccccccccccCch--hhHhhhhhhhhhccCCCCCCCccccceecCCCCCC
Q 001366 214 FFVKTTL--KGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMPS--DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDL 289 (1092)
Q Consensus 214 ~~~~~~~--~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1092)
|.+.+.+ +|.|.||++... ..+..++.|++....... ......++...+...+|||++.+++....+...+
T Consensus 33 y~i~~~lg~G~~g~Vy~a~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~- 107 (286)
T 3uqc_A 33 YRLLIFHGGVPPLQFWQALDT----ALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL- 107 (286)
T ss_dssp EEEEEEEEBSTTCEEEEEEET----TTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE-
T ss_pred EEEEEEEcccCCeEEEEEEec----CCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE-
Confidence 4444444 478999999863 235566777664433221 2234456666778889999999887765543333
Q ss_pred CccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEE
Q 001366 290 GARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369 (1092)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vk 369 (1092)
++|||++|++|.++++.. ....++..|+.||+.||+|||++||+||||||+||||+.+|.+|
T Consensus 108 ---------------lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~k 169 (286)
T 3uqc_A 108 ---------------VVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVV 169 (286)
T ss_dssp ---------------EEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEE
T ss_pred ---------------EEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEE
Confidence 389999999999999643 34557899999999999999999999999999999999999998
Q ss_pred EecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccccCcccccccccccCccCCcccccCccccccc
Q 001366 370 YIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFNHNMNFSRWWSLFPSKYGNKIETANESDINEV 449 (1092)
Q Consensus 370 l~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (1092)
+++++
T Consensus 170 l~~~~--------------------------------------------------------------------------- 174 (286)
T 3uqc_A 170 LAYPA--------------------------------------------------------------------------- 174 (286)
T ss_dssp ECSCC---------------------------------------------------------------------------
T ss_pred EEecc---------------------------------------------------------------------------
Confidence 85321
Q ss_pred cCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccccCcccccCCCCCccccchhhhHHHHHHcCC-
Q 001366 450 SIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR- 528 (1092)
Q Consensus 450 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~t~~sDIwSLGvll~ell~~- 528 (1092)
|++| ++.++|||||||+||||+++
T Consensus 175 ------------------------------------------------~~~~-------~~~~~Di~slG~il~elltg~ 199 (286)
T 3uqc_A 175 ------------------------------------------------TMPD-------ANPQDDIRGIGASLYALLVNR 199 (286)
T ss_dssp ------------------------------------------------CCTT-------CCHHHHHHHHHHHHHHHHHSE
T ss_pred ------------------------------------------------ccCC-------CCchhHHHHHHHHHHHHHHCC
Confidence 4443 78999999999999999986
Q ss_pred --CCcHHHHHH---HHHhccccCCCC--CCCCCChhHHHHHHhccccCCCCCCCHHHHhhh
Q 001366 529 --FDSERALAA---AMSDLRDRILPP--SFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582 (1092)
Q Consensus 529 --f~~~~~~~~---~~~~~~~~~~p~--~~~~~~~~~~~li~~lL~~dP~~Rpsa~eiL~~ 582 (1092)
|........ .+..+.....++ .....++.+.+|+.+||++||.+| |+.|+++.
T Consensus 200 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~ 259 (286)
T 3uqc_A 200 WPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNL 259 (286)
T ss_dssp ECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred CCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence 544322110 011111111111 124567889999999999999999 99999884
No 378
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=9.5e-22 Score=231.13 Aligned_cols=279 Identities=11% Similarity=0.072 Sum_probs=211.5
Q ss_pred eEEEEEc--ccceEEeeEEeeeecCCCCCEEEEEEcC--------------CCCEEEEEeCC------CcEEEEEcCCCC
Q 001366 755 LCKYARY--SKFEVQGMLRTGEFNNSANVICSISFDR--------------DEDHFAAAGVS------KKIKIFEFNALF 812 (1092)
Q Consensus 755 ~~k~w~~--~~~~~~~~l~~~~l~~h~~~V~sl~fsp--------------dg~~latgg~D------~~I~Iwd~~~~~ 812 (1092)
.+++|+. .+.+... ...+.+|...+..+++++ .+..++.++.+ +.|++||+...
T Consensus 94 ~i~lwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~- 169 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLA---QNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGY- 169 (415)
T ss_dssp EEEEEECSSSTTCEEE---EEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSC-
T ss_pred EEEEEeCCCCCCCEEe---eeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCC-
Confidence 8999998 6655332 223557777777777664 26677766654 79999998641
Q ss_pred CCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCC---cEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEE-
Q 001366 813 NDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG---VVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLA- 888 (1092)
Q Consensus 813 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dg---tV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~la- 888 (1092)
.......|...|.+++|+|+ ++.|++++.|+ +|++||+.+++.. .+..|...+.+++|+| +++.|+
T Consensus 170 -------~~~~l~~~~~~v~~~~~Spd-g~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~sp-dg~~la~ 239 (415)
T 2hqs_A 170 -------NQFVVHRSPQPLMSPAWSPD-GSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSP-DGSKLAF 239 (415)
T ss_dssp -------SCEEEEEESSCEEEEEECTT-SSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECT-TSSEEEE
T ss_pred -------CCEEEeCCCCcceeeEEcCC-CCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcC-CCCEEEE
Confidence 22344567889999999998 88999999885 9999999998875 5667888999999999 888776
Q ss_pred EEeCCCc--EEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEEC-CC--eEEEEEcCCCCcceEEecCCCCCeEEE
Q 001366 889 SGSDDCS--VKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSA-DY--RTYCYDLRNARAPWCVLAGHEKAVSYV 963 (1092)
Q Consensus 889 Sgs~Dg~--I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~-Dg--~I~vwDlr~~~~~~~~l~~H~~~V~~v 963 (1092)
+++.|+. |.+||+.+++......+...+.+++|+|+|. .|++++. ++ .|++||+.+++ ...+..|...+.++
T Consensus 240 ~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~-~l~~~s~~~g~~~i~~~d~~~~~--~~~l~~~~~~~~~~ 316 (415)
T 2hqs_A 240 ALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQ-NLAFTSDQAGRPQVYKVNINGGA--PQRITWEGSQNQDA 316 (415)
T ss_dssp EECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTSSC--CEECCCSSSEEEEE
T ss_pred EEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCC-EEEEEECCCCCcEEEEEECCCCC--EEEEecCCCcccCe
Confidence 7776665 9999999887654444677899999999996 5666665 45 68888988765 34556677889999
Q ss_pred EEc-CCCEEEEEECC---CeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCC---cEEEEeCC
Q 001366 964 KFL-DSGTLVTASTD---NKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESN---EVYAYHRS 1036 (1092)
Q Consensus 964 ~fs-~~~~L~Sgs~D---g~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg---~I~Iwd~~ 1036 (1092)
+|+ ++++|++++.+ ..|.+||+.+. .+ ..+..|. .+.+++|+|+|++|++++.++ .|++||+.
T Consensus 317 ~~spdG~~l~~~~~~~g~~~i~~~d~~~~--------~~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 317 DVSSDGKFMVMVSSNGGQQHIAKQDLATG--------GV-QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp EECTTSSEEEEEEECSSCEEEEEEETTTC--------CE-EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred EECCCCCEEEEEECcCCceEEEEEECCCC--------CE-EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC
Confidence 999 66778877764 58999999842 22 4455554 889999999999999988777 79999986
Q ss_pred CCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCC
Q 001366 1037 LPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSD 1075 (1092)
Q Consensus 1037 ~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~ 1075 (1092)
.+. +.. ...|...|.+++|+|.-.
T Consensus 387 g~~-~~~--------------l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 387 GRF-KAR--------------LPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp SCC-EEE--------------CCCSSSEEEEEEECCCCC
T ss_pred CCc-EEE--------------eeCCCCCCcCCccccccc
Confidence 432 222 245678899999999643
No 379
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.89 E-value=1.5e-21 Score=229.53 Aligned_cols=277 Identities=11% Similarity=0.031 Sum_probs=207.6
Q ss_pred CEEEEEEcCCCC-EEEEEe----CCC----cEEEEEc--CCCCCCCcccccceeeecCCCCeEEEEEecC----------
Q 001366 781 VICSISFDRDED-HFAAAG----VSK----KIKIFEF--NALFNDSVDVYYPAVEMSNRSKLSCVCWNNY---------- 839 (1092)
Q Consensus 781 ~V~sl~fspdg~-~latgg----~D~----~I~Iwd~--~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~---------- 839 (1092)
.|...+|.+.|. ++++|+ .|| +|+|||+ .+.. ........+|...+..+++++.
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~ 138 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGT-----VLAQNSYKVNKQWLRYAGHTASDEVFEKLTGI 138 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTC-----EEEEEEEEECGGGHHHHHHHHHHHHHHHHHSS
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCC-----EEeeeEEEcChhHHHHHHHHHHHHHHHHHcCC
Confidence 455567777764 666776 357 8999998 5421 1111234456666766666531
Q ss_pred ---CCCEEEEEECC------CcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCC---cEEEEecCCCcee
Q 001366 840 ---IKNYLASADYD------GVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDC---SVKLWNINEKNSL 907 (1092)
Q Consensus 840 ---~~~~LaSgs~D------gtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg---~I~iWDl~~~~~l 907 (1092)
.+..++.++.+ ++|++||+. +.....+.+|...+.+++|+| +++.|++++.|+ .|++||+.++++.
T Consensus 139 ~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~ 216 (415)
T 2hqs_A 139 KGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVR 216 (415)
T ss_dssp CCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEE
T ss_pred CCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEE
Confidence 04456666554 799999997 455677788999999999999 899999999885 9999999999887
Q ss_pred eeEecCCceEEEEEccCCCeEEEEEECCCe--EEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEEC-CC--eEE
Q 001366 908 ATIKNIANVCCVQFSAHSSHLLAFGSADYR--TYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTAST-DN--KLK 981 (1092)
Q Consensus 908 ~~l~~~~~V~sl~fsp~~~~~latgs~Dg~--I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~-Dg--~I~ 981 (1092)
....+...+.+++|+|+|..++++++.++. |++||+.+++ ...+..|...+.+++|+ ++.+|++++. ++ .|.
T Consensus 217 ~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~ 294 (415)
T 2hqs_A 217 QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVY 294 (415)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC--EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEE
Confidence 655577789999999999755557776654 9999998765 35677888999999999 6667887776 44 677
Q ss_pred EEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecC---CcEEEEeCCCCCceeeeeccccCCCCCcccc
Q 001366 982 LWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSES---NEVYAYHRSLPMPITSYKFGSIDPISGKETD 1058 (1092)
Q Consensus 982 vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~D---g~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~ 1058 (1092)
+||+.+. . ...+..|...+..++|+|+|++|++++.+ ..|++||..+++... +
T Consensus 295 ~~d~~~~--------~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l-------------- 350 (415)
T 2hqs_A 295 KVNINGG--------A-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-L-------------- 350 (415)
T ss_dssp EEETTSS--------C-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-C--------------
T ss_pred EEECCCC--------C-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-e--------------
Confidence 7788732 2 34455567788899999999999988864 589999998776422 1
Q ss_pred CCCCCCEEEEEEeCCCCEEEEEecCC---eEEEEEc
Q 001366 1059 DDNGLFVSSVCWRRRSDMVVAANSSG---CIKVLQM 1091 (1092)
Q Consensus 1059 ~~h~~~V~sva~spd~~~Lasgs~DG---~V~vW~l 1091 (1092)
..+. .+.+++|+|++++|++++.++ .|++|++
T Consensus 351 ~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 351 SSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp CCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred cCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEEC
Confidence 1222 689999999999999988877 7899885
No 380
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.89 E-value=2.2e-24 Score=262.93 Aligned_cols=193 Identities=12% Similarity=-0.057 Sum_probs=131.7
Q ss_pred hhhhhhhccC-CCCCCCccccceecCCCCCCCccCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHH
Q 001366 260 AAGAMMVASN-ASPKPVGVGTAVVSNGSLDLGARTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQI 338 (1092)
Q Consensus 260 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qi 338 (1092)
.+++..|... .|+|++.+++....+...++ +||||+|++|.++|+..+. ++. ..|++||
T Consensus 289 ~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL----------------VMEyv~G~~L~d~i~~~~~-l~~---~~I~~QI 348 (569)
T 4azs_A 289 HNEIKFLTQPPAGFDAPAVLAHGENAQSGWL----------------VMEKLPGRLLSDMLAAGEE-IDR---EKILGSL 348 (569)
T ss_dssp HHHHHHHHSCCTTCCCCCEEEEEECSSEEEE----------------EEECCCSEEHHHHHHTTCC-CCH---HHHHHHH
T ss_pred HHHHHHHHhcCCCCCeeEEEEEEEECCEEEE----------------EEecCCCCcHHHHHHhCCC-CCH---HHHHHHH
Confidence 4456667776 79999999888876666663 9999999999999987754 444 3589999
Q ss_pred HHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccccccccCCCCCCchhhhhccccccccccccccchhhcccc
Q 001366 339 VALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKETLESASLDIPHSENYRLRRRSAEEEMFTTGIASAKKQKFN 418 (1092)
Q Consensus 339 l~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (1092)
++||+|||++|||||||||+||||+.+|.+||+|||+++......
T Consensus 349 l~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~----------------------------------- 393 (569)
T 4azs_A 349 LRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC----------------------------------- 393 (569)
T ss_dssp HHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC--------------------------------------
T ss_pred HHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC-----------------------------------
Confidence 999999999999999999999999999999999999998644100
Q ss_pred cCcccccccccccCccCCcccccCccccccccCCCCCCCcccccccCCCCCccCCCCCcccccccccccccccccccccc
Q 001366 419 HNMNFSRWWSLFPSKYGNKIETANESDINEVSIPHSHNDTNEHHTNAGFGNYSKSSSPLVSNTAQQQSTSVSEQLEEKWY 498 (1092)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 498 (1092)
...++.+||++|
T Consensus 394 --------------------------------------------------------------------~~~~t~vGTp~Y 405 (569)
T 4azs_A 394 --------------------------------------------------------------------SWPTNLVQSFFV 405 (569)
T ss_dssp --------------------------------------------------------------------CCSHHHHHHHHH
T ss_pred --------------------------------------------------------------------ccccCceechhh
Confidence 011257899999
Q ss_pred cCcccccCCCCCccccchhhhHHHHHHcCCCCcHHHHHHHHHhccccCCCCCCCCCChhHHHHHHhccccCCCCCCCHHH
Q 001366 499 ASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTRE 578 (1092)
Q Consensus 499 ~aPE~l~~~~~t~~sDIwSLGvll~ell~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~lL~~dP~~Rpsa~e 578 (1092)
||||++.+ .+..++|+||+|+++++|++++.... ..+.. .|+. ...+..+...++..+|..||....
T Consensus 406 mAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~~------~~l~~--~~~~----~~~~~~l~~~l~~~~~~~~~~~~~ 472 (569)
T 4azs_A 406 FVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNWL------YAVWQ--EPVE----RWNFVLLLALFEKKAKLPSAEQQR 472 (569)
T ss_dssp HHHHHC------------------CCCCTTHHHHH------HHHHT--SCGG----GCSHHHHHHHHHTGGGSCCGGGSS
T ss_pred ccHHHhCC-CCCCcccccccccchhhhccccchhH------HHhhc--CCCC----CCcHHHHHHHHhCCCCCCCCChhh
Confidence 99999976 46788999999999999987632221 11111 1111 122456777778888888888888
Q ss_pred Hhhhhhhhhh
Q 001366 579 ILQSEVTNEF 588 (1092)
Q Consensus 579 iL~~~~~~~~ 588 (1092)
...++|....
T Consensus 473 ~~~~~~~~~~ 482 (569)
T 4azs_A 473 GATEQWIIAQ 482 (569)
T ss_dssp CCHHHHHHHH
T ss_pred hccchhHHHH
Confidence 8788776543
No 381
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=5e-21 Score=209.72 Aligned_cols=258 Identities=10% Similarity=0.040 Sum_probs=195.9
Q ss_pred EEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCC-CceEEEeeccC-cc
Q 001366 796 AAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACT-GQTVSHYIEHE-KR 873 (1092)
Q Consensus 796 tgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~t-g~~i~~l~~h~-~~ 873 (1092)
+++.|++|++||+... .......|...|.+++|+|+ +++|++++ ++.|++||+.+ ++....+..|. ..
T Consensus 17 ~~~~~~~i~~~d~~~~--------~~~~~~~~~~~v~~~~~spd-g~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~ 86 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTR--------KMRVVWQTPELFEAPNWSPD-GKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATIC 86 (297)
T ss_dssp -CCCCEEEEEEETTTT--------EEEEEEEESSCCEEEEECTT-SSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCB
T ss_pred CCCcceeEEEEeCCCC--------ceeeeccCCcceEeeEECCC-CCEEEEEc-CCeEEEEeCCCCCCceEecccccccc
Confidence 4567899999998652 12234457889999999998 88888876 88999999999 88777666663 67
Q ss_pred EEEEEEecCCCCEEEEEe--CCCcEEEEec--CCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcc
Q 001366 874 AWSVDFSQVHPTKLASGS--DDCSVKLWNI--NEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAP 949 (1092)
Q Consensus 874 V~sv~fsp~~~~~laSgs--~Dg~I~iWDl--~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~ 949 (1092)
+.+++|+| ++..|++++ .++.++||.+ .++. ...+.....+.+++|+|++..++++++.++.+++|++......
T Consensus 87 ~~~~~~sp-dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~ 164 (297)
T 2ojh_A 87 NNDHGISP-DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV 164 (297)
T ss_dssp CSCCEECT-TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC
T ss_pred ccceEECC-CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCc
Confidence 89999999 889999998 3455666655 4443 4455555569999999999766668889999999997543334
Q ss_pred eEEecCCCCCeEEEEEc-CCCEEEEEE-CCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecC
Q 001366 950 WCVLAGHEKAVSYVKFL-DSGTLVTAS-TDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSES 1027 (1092)
Q Consensus 950 ~~~l~~H~~~V~~v~fs-~~~~L~Sgs-~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~D 1027 (1092)
...+..|...+.++.|+ ++..|+.++ .++.++||++.. .......+..|...+..++|+|+|++|++++.+
T Consensus 165 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 165 ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRV-------DGSSVERITDSAYGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET-------TSSCEEECCCCSEEEEEEEECTTSSEEEEEEEE
T ss_pred ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECC-------CCCCcEEEecCCcccCCeEECCCCCEEEEEEcC
Confidence 56677788899999998 566676655 589999999862 123456677788889999999999999888865
Q ss_pred -----------CcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCC
Q 001366 1028 -----------NEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSG 1084 (1092)
Q Consensus 1028 -----------g~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG 1084 (1092)
+.|++||...++......+ .+|...|.+++|+|+++.|++++.+.
T Consensus 238 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~------------~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 238 ADVFDHPRDLDVRVQLMDMDGGNVETLFDL------------FGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTCCSCCSSEEEEEEEEETTSCSCEEEEEE------------EESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCCCcccccCceEEEEEecCCCCceeeecc------------CCCCcccccceECCCCCEEEEEEecc
Confidence 5699999987765433221 23456788899999999999887653
No 382
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.87 E-value=2.4e-20 Score=226.76 Aligned_cols=273 Identities=10% Similarity=0.017 Sum_probs=210.6
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEC--CCCce
Q 001366 786 SFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDA--CTGQT 863 (1092)
Q Consensus 786 ~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~--~tg~~ 863 (1092)
+|+|++.++++++.|++|.+||..+.. .......+ ..+.+++|+|+ +++|++++.|++|++||+ .++++
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~-------~~~~i~~g-~~~~~v~~spd-g~~l~v~~~d~~V~v~D~~~~t~~~ 214 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKK-------IVKVIDTG-YAVHISRMSAS-GRYLLVIGRDARIDMIDLWAKEPTK 214 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCC-------EEEEEECS-TTEEEEEECTT-SCEEEEEETTSEEEEEETTSSSCEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCce-------EEEEEecC-cccceEEECCC-CCEEEEECCCCeEEEEECcCCCCcE
Confidence 378999999999999999999986521 11111112 23889999998 899999999999999999 88998
Q ss_pred EEEeeccCccEEEEEEecC---CCCEEEEEe-CCCcEEEEecCCCceeeeEec------------CCceEEEEEccCCCe
Q 001366 864 VSHYIEHEKRAWSVDFSQV---HPTKLASGS-DDCSVKLWNINEKNSLATIKN------------IANVCCVQFSAHSSH 927 (1092)
Q Consensus 864 i~~l~~h~~~V~sv~fsp~---~~~~laSgs-~Dg~I~iWDl~~~~~l~~l~~------------~~~V~sl~fsp~~~~ 927 (1092)
+.++. +...+..++|+|. +++++++++ .+++|.+||..+++++.++.. ...+.++.++|++..
T Consensus 215 ~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~ 293 (543)
T 1nir_A 215 VAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPE 293 (543)
T ss_dssp EEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSE
T ss_pred EEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCE
Confidence 88887 4556799999982 467777776 589999999999999888863 126889999999888
Q ss_pred EEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEE-ECCCeEEEEEcCCCCCCCCCCCceeEEEcC-
Q 001366 928 LLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTA-STDNKLKLWDLKRTSHTGPSTNACSLTFSG- 1004 (1092)
Q Consensus 928 ~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sg-s~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~- 1004 (1092)
++++...++.|.+||+.+.+........+...+..+.|+ ++++|+++ ..+++|.+||+. ++.++..+..
T Consensus 294 ~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~--------tg~l~~~i~~g 365 (543)
T 1nir_A 294 FIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSK--------DRRLSALVDVG 365 (543)
T ss_dssp EEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETT--------TTEEEEEEECS
T ss_pred EEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECC--------CCeEEEeeccC
Confidence 888889999999999987654332223466778899999 56666655 468999999998 4556666653
Q ss_pred ---CCCCeEEEEEecC-CCEEEEEe-cCCcEEEEeCCC-------CCceeeeeccccCCCCCccccCCCCCCEEEEEEeC
Q 001366 1005 ---HTNEKNFVGLSTA-DGYIACGS-ESNEVYAYHRSL-------PMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRR 1072 (1092)
Q Consensus 1005 ---h~~~V~~v~~spd-g~~lasgs-~Dg~I~Iwd~~~-------~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~sp 1072 (1092)
|......+ ++|+ +.++++++ .|++|.+|+... .+.+.++. .|+..+..|+|+|
T Consensus 366 ~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~--------------~~g~~~~~v~~~p 430 (543)
T 1nir_A 366 KTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ--------------GQGGGSLFIKTHP 430 (543)
T ss_dssp SSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE--------------CSCSCCCCEECCT
T ss_pred CCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEE--------------cCCCCceEEEcCC
Confidence 55443333 5787 55677775 689999999987 55555443 4556778899999
Q ss_pred CCCEEEEEe-------cCCeEEEEEc
Q 001366 1073 RSDMVVAAN-------SSGCIKVLQM 1091 (1092)
Q Consensus 1073 d~~~Lasgs-------~DG~V~vW~l 1091 (1092)
++++|++++ .+++|.|||+
T Consensus 431 dg~~l~v~~~~~~~~~~~~~v~v~d~ 456 (543)
T 1nir_A 431 KSSHLYVDTTFNPDARISQSVAVFDL 456 (543)
T ss_dssp TCCEEEECCTTCSSHHHHTCEEEEET
T ss_pred CCCcEEEecCCCCCcccCceEEEEEC
Confidence 999999987 3789999996
No 383
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=9e-20 Score=205.40 Aligned_cols=283 Identities=8% Similarity=0.058 Sum_probs=198.1
Q ss_pred EEcCCCC-EEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEEC-CCcEEEEECCCCce
Q 001366 786 SFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADY-DGVVKLWDACTGQT 863 (1092)
Q Consensus 786 ~fspdg~-~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~-DgtV~IWD~~tg~~ 863 (1092)
.|.+++. .+++++.++.|.+||..+.. .......+...+ +++|+|+ ++++++++. ++.|.+||+.+++.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~-------~~~~~~~~~~~~-~~~~s~d-g~~l~~~~~~~~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLE-------ILNQITLGYDFV-DTAITSD-CSNVVVTSDFCQTLVQIETQLEPP 74 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCC-------EEEEEECCCCEE-EEEECSS-SCEEEEEESTTCEEEEEECSSSSC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccc-------eeeeEEccCCcc-eEEEcCC-CCEEEEEeCCCCeEEEEECCCCce
Confidence 4566555 47788889999999987521 111122335556 9999998 665555554 89999999999987
Q ss_pred -EEEeeccCccEEEEEEecCCCCEEEEEeCCC---cEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCCe-E
Q 001366 864 -VSHYIEHEKRAWSVDFSQVHPTKLASGSDDC---SVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYR-T 938 (1092)
Q Consensus 864 -i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg---~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~-I 938 (1092)
...+..+..+..+++|+| ++++++++..++ .|.+||+.+++.+..+.....+.+++|+|++..+++++..++. |
T Consensus 75 ~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i 153 (331)
T 3u4y_A 75 KVVAIQEGQSSMADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTV 153 (331)
T ss_dssp EEEEEEECSSCCCCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEE
T ss_pred eEEecccCCCCccceEECC-CCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceE
Confidence 777777777666699999 888888555553 8999999999999888887888999999999767777777788 9
Q ss_pred EEEEcCCCCcce---EEecCCCCCeEEEEEc-CCCEEE-EEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEE
Q 001366 939 YCYDLRNARAPW---CVLAGHEKAVSYVKFL-DSGTLV-TASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVG 1013 (1092)
Q Consensus 939 ~vwDlr~~~~~~---~~l~~H~~~V~~v~fs-~~~~L~-Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~ 1013 (1092)
.+|++....... .....+...+..++|+ ++++++ ++..++.|.+||+.+... ...+..+..+ ..+..++
T Consensus 154 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~-----~~~~~~~~~~-~~~~~~~ 227 (331)
T 3u4y_A 154 RRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN-----ITLLNAVGTN-NLPGTIV 227 (331)
T ss_dssp EEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS-----CEEEEEEECS-SCCCCEE
T ss_pred EEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc-----cceeeeccCC-CCCceEE
Confidence 999998543321 1112334568999999 555554 455689999999984321 0115555543 5677899
Q ss_pred EecCCCEEEEEe-cCCcEEEEeCCCCCc--eeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEec-CCeEEEE
Q 001366 1014 LSTADGYIACGS-ESNEVYAYHRSLPMP--ITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANS-SGCIKVL 1089 (1092)
Q Consensus 1014 ~spdg~~lasgs-~Dg~I~Iwd~~~~~~--i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~-DG~V~vW 1089 (1092)
|+|+|++|+.++ .++.|.+||..+++. +..+..+ -.... .....+.+++|+|++++|++++. ++.|.||
T Consensus 228 ~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 300 (331)
T 3u4y_A 228 VSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHG--LLIDP-----RPLFGANQMALNKTETKLFISANISRELKVF 300 (331)
T ss_dssp ECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECC--CCCCC-----GGGTTCCCEEECTTSSEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccc--cccCC-----CCcccccceEECCCCCEEEEecCCCCcEEEE
Confidence 999999766554 578899999988776 3332210 00001 11122367899999998876655 5799999
Q ss_pred Ec
Q 001366 1090 QM 1091 (1092)
Q Consensus 1090 ~l 1091 (1092)
++
T Consensus 301 d~ 302 (331)
T 3u4y_A 301 TI 302 (331)
T ss_dssp ET
T ss_pred Ee
Confidence 96
No 384
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.86 E-value=9.5e-20 Score=205.07 Aligned_cols=272 Identities=11% Similarity=0.098 Sum_probs=187.8
Q ss_pred EEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECC-CcEEEEECC--CCc--eEEEe
Q 001366 793 HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYD-GVVKLWDAC--TGQ--TVSHY 867 (1092)
Q Consensus 793 ~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~D-gtV~IWD~~--tg~--~i~~l 867 (1092)
++++++.|+.|++|++... . .........+...+.+++|+|+ +++|++++.+ +.|++|++. +++ .+..+
T Consensus 7 l~~~~~~~~~v~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHE--G---ALTLTQVVDVPGQVQPMVVSPD-KRYLYVGVRPEFRVLAYRIAPDDGALTFAAES 80 (343)
T ss_dssp EEEEEGGGTEEEEEEECTT--S---CEEEEEEEECSSCCCCEEECTT-SSEEEEEETTTTEEEEEEECTTTCCEEEEEEE
T ss_pred EEEeCCCCCeEEEEEECCC--C---cEEEeeeEecCCCCceEEECCC-CCEEEEeecCCCeEEEEEecCCCCceeecccc
Confidence 4555578999999998631 1 0112233456778999999998 8888888876 999999997 554 34455
Q ss_pred eccCccEEEEEEecCCCCEEEEEe-CCCcEEEEec---CCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEc
Q 001366 868 IEHEKRAWSVDFSQVHPTKLASGS-DDCSVKLWNI---NEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDL 943 (1092)
Q Consensus 868 ~~h~~~V~sv~fsp~~~~~laSgs-~Dg~I~iWDl---~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDl 943 (1092)
..+. .+.+++|+| ++..|++++ .++.|.+||+ .+.+.+..+.....+.+++|+|++..+++++..++.|++||+
T Consensus 81 ~~~~-~~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 158 (343)
T 1ri6_A 81 ALPG-SLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTV 158 (343)
T ss_dssp ECSS-CCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred ccCC-CCcEEEEcC-CCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEe
Confidence 5444 788999999 777666555 5889999999 444555566666779999999999744444448999999999
Q ss_pred CC-CCcc-eE--Eec-CCCCCeEEEEEc-CCCEEEEE-ECCCeEEEEEcCCCCCCCCCCCceeEEEc----CC--CCCeE
Q 001366 944 RN-ARAP-WC--VLA-GHEKAVSYVKFL-DSGTLVTA-STDNKLKLWDLKRTSHTGPSTNACSLTFS----GH--TNEKN 1010 (1092)
Q Consensus 944 r~-~~~~-~~--~l~-~H~~~V~~v~fs-~~~~L~Sg-s~Dg~I~vWDl~~~~~~~~~~~~~~~~l~----~h--~~~V~ 1010 (1092)
.+ ++.. .. ... .....+..++|+ ++.+++.+ ..++.|.+||+..... .......+. ++ ...+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~ 234 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHG----NIECVQTLDMMPENFSDTRWAA 234 (343)
T ss_dssp CTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTS----CCEEEEEEECSCTTCCSCCCEE
T ss_pred cCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCC----cEEEEeeccccCccccccCCcc
Confidence 87 4321 11 222 234578899998 55556554 4889999999963111 011122222 11 33567
Q ss_pred EEEEecCCCEEE-EEecCCcEEEEeCCC--CC--ceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEe-cCC
Q 001366 1011 FVGLSTADGYIA-CGSESNEVYAYHRSL--PM--PITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAAN-SSG 1084 (1092)
Q Consensus 1011 ~v~~spdg~~la-sgs~Dg~I~Iwd~~~--~~--~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs-~DG 1084 (1092)
.++|+|+|++|+ +++.++.|.+|++.. +. .+..+. .+. .+.+++|+|++++|++++ .++
T Consensus 235 ~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~--------------~~~-~~~~~~~s~dg~~l~~~~~~~~ 299 (343)
T 1ri6_A 235 DIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP--------------TET-QPRGFNVDHSGKYLIAAGQKSH 299 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE--------------CSS-SCCCEEECTTSSEEEEECTTTC
T ss_pred ceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec--------------CCC-ccceEEECCCCCEEEEecCCCC
Confidence 899999998776 455799999999873 22 222221 122 278899999999988888 689
Q ss_pred eEEEEEc
Q 001366 1085 CIKVLQM 1091 (1092)
Q Consensus 1085 ~V~vW~l 1091 (1092)
.|.||++
T Consensus 300 ~v~v~~~ 306 (343)
T 1ri6_A 300 HISVYEI 306 (343)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 9999964
No 385
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.86 E-value=4e-19 Score=201.31 Aligned_cols=268 Identities=9% Similarity=0.034 Sum_probs=201.6
Q ss_pred CCEEEEEEcCCCCEEEEEeC-------CCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCc
Q 001366 780 NVICSISFDRDEDHFAAAGV-------SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV 852 (1092)
Q Consensus 780 ~~V~sl~fspdg~~latgg~-------D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dgt 852 (1092)
..+..++|+|+|+++++++. ++.|.+||..+.. ..........+.+++|+|+++.+++++..++.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~ 112 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE--------VTQAIHNDLKPFGATINNTTQTLWFGNTVNSA 112 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCC--------EEEEEEESSCCCSEEEETTTTEEEEEETTTTE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCe--------EEEEEecCCCcceEEECCCCCEEEEEecCCCE
Confidence 45778999999998888774 5689999986521 11111223457889999983335566666899
Q ss_pred EEEEECCCCceEEEeeccCcc---------EEEEEEecCCCCEEEEEe--CCCcEEEEecCCCceeeeEe-cCCceEEEE
Q 001366 853 VKLWDACTGQTVSHYIEHEKR---------AWSVDFSQVHPTKLASGS--DDCSVKLWNINEKNSLATIK-NIANVCCVQ 920 (1092)
Q Consensus 853 V~IWD~~tg~~i~~l~~h~~~---------V~sv~fsp~~~~~laSgs--~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~ 920 (1092)
|.+||..+++.+..+..+... +.+++|+| +++.+++++ .++.|.+||+.+++.+..+. ....+.+++
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLA 191 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCE
T ss_pred EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEE
Confidence 999999999988888765422 78999999 777666655 58899999999999988888 556689999
Q ss_pred EccCCCeEEEEEECCCeEEEEEcCCCCcceEEec----CCCCCeEEEEEc-CCCEEEEEEC-CCeEEEEEcCCCCCCCCC
Q 001366 921 FSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLA----GHEKAVSYVKFL-DSGTLVTAST-DNKLKLWDLKRTSHTGPS 994 (1092)
Q Consensus 921 fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~----~H~~~V~~v~fs-~~~~L~Sgs~-Dg~I~vWDl~~~~~~~~~ 994 (1092)
|+|++. .+++++.++.|.+||+.+++.. ..+. ++...+..++|+ ++++++.++. ++.|.+||+.+
T Consensus 192 ~s~dg~-~l~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~------- 262 (353)
T 3vgz_A 192 LDSEGK-RLYTTNADGELITIDTADNKIL-SRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRN------- 262 (353)
T ss_dssp EETTTT-EEEEECTTSEEEEEETTTTEEE-EEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT-------
T ss_pred ECCCCC-EEEEEcCCCeEEEEECCCCeEE-EEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCC-------
Confidence 999996 7777888999999999987643 3332 356678889998 5666665554 59999999974
Q ss_pred CCceeEEEcCCCCCeEEEEEecCCCEEEEEe-cCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCC
Q 001366 995 TNACSLTFSGHTNEKNFVGLSTADGYIACGS-ESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRR 1073 (1092)
Q Consensus 995 ~~~~~~~l~~h~~~V~~v~~spdg~~lasgs-~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd 1073 (1092)
+..+..+.... ...++|+|+|++++.++ .++.|.+||..+++.+..+.. ...+.+++|+|+
T Consensus 263 -~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~---------------~~~~~~~~~s~d 324 (353)
T 3vgz_A 263 -GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT---------------PTHPNSLALSAD 324 (353)
T ss_dssp -CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC---------------CSEEEEEEECTT
T ss_pred -CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec---------------CCCCCeEEEcCC
Confidence 34455554433 25699999999655544 789999999998887776642 235799999999
Q ss_pred CCEEEEEecC
Q 001366 1074 SDMVVAANSS 1083 (1092)
Q Consensus 1074 ~~~Lasgs~D 1083 (1092)
+++|+.++.+
T Consensus 325 g~~l~v~~~~ 334 (353)
T 3vgz_A 325 GKTLYVSVKQ 334 (353)
T ss_dssp SCEEEEEEEC
T ss_pred CCEEEEEEcc
Confidence 9977776655
No 386
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.86 E-value=2.9e-20 Score=233.96 Aligned_cols=280 Identities=9% Similarity=0.002 Sum_probs=201.2
Q ss_pred CCCEEEEEEcCCCCEEEEEeC-CC-----cEEEEEcCCCCCCCcccccceeeecCC----------------------CC
Q 001366 779 ANVICSISFDRDEDHFAAAGV-SK-----KIKIFEFNALFNDSVDVYYPAVEMSNR----------------------SK 830 (1092)
Q Consensus 779 ~~~V~sl~fspdg~~latgg~-D~-----~I~Iwd~~~~~~~~~~~~~~~~~~~h~----------------------~~ 830 (1092)
...|.+++|+|||++|++++. |+ .|++||+.+........ ...+. ..
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVD-----SKVVLPGTETLSDEEKARRERQRIAAMTG 110 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEEC-----GGGTC--------------------CCEE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccc-----hhhcccccccccchhhhhhhhhhhccccC
Confidence 456889999999999999998 88 89999987522100000 00011 34
Q ss_pred eEEEEEecCCCCEEEEEECCCcEEEEECCCCc--eEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceee
Q 001366 831 LSCVCWNNYIKNYLASADYDGVVKLWDACTGQ--TVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLA 908 (1092)
Q Consensus 831 V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~--~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~ 908 (1092)
|.+++|+|+ +++|++++. +.|++||+.++. .+..+..|...+.+++|+| +++.|++++ ++.|.+||+.+++...
T Consensus 111 v~~~~~SpD-g~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SP-DG~~la~~~-~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 111 IVDYQWSPD-AQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSP-KGGFVSFIR-GRNLWVIDLASGRQMQ 186 (741)
T ss_dssp SCCCEECTT-SSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECT-TSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred cceeEECCC-CCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCC-CCCEEEEEe-CCcEEEEecCCCCEEE
Confidence 789999998 888888886 999999998883 4456677888899999999 899999887 4689999999887655
Q ss_pred eEecCCc-----------------eEEEEEccCCCeEEEEEECCC---------------------------------eE
Q 001366 909 TIKNIAN-----------------VCCVQFSAHSSHLLAFGSADY---------------------------------RT 938 (1092)
Q Consensus 909 ~l~~~~~-----------------V~sl~fsp~~~~~latgs~Dg---------------------------------~I 938 (1092)
....... +.+++|+|||. .|++++.|+ .|
T Consensus 187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~-~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS-AIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS-CEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred eccCCccceeccccceeeeeccccccceEECCCCC-EEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 4432221 47899999996 666666554 88
Q ss_pred EEEEcCC-CCcceEEec--CCCCCeEEEEEcCCCEEEEEEC-----CCeEEEEEcCCCCCCCCCCCceeEEEcCCCC---
Q 001366 939 YCYDLRN-ARAPWCVLA--GHEKAVSYVKFLDSGTLVTAST-----DNKLKLWDLKRTSHTGPSTNACSLTFSGHTN--- 1007 (1092)
Q Consensus 939 ~vwDlr~-~~~~~~~l~--~H~~~V~~v~fs~~~~L~Sgs~-----Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~--- 1007 (1092)
++||+.+ ++. ..... .|...+..++|.++++|+.++. +..|.+||+.+ +.+...+..+..
T Consensus 266 ~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~--------g~~~~~~~~~~~~~~ 336 (741)
T 2ecf_A 266 GVISPAEQAQT-QWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLAS--------NQQRVLAHETSPTWV 336 (741)
T ss_dssp EEECSSTTCCC-EEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTT--------CCEEEEEEEECSSCC
T ss_pred EEEECCCCCce-EEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCC--------CceEEEEEcCCCCcC
Confidence 9999987 653 22222 4778899999933456776553 56899999984 344444444432
Q ss_pred -CeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEE-EEeCCCCEEEE-EecCC
Q 001366 1008 -EKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSV-CWRRRSDMVVA-ANSSG 1084 (1092)
Q Consensus 1008 -~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sv-a~spd~~~Las-gs~DG 1084 (1092)
.+..++|+|||+++++++.|+.++||.......+.. ...+...|.++ +|+|+++.|+. ++.++
T Consensus 337 ~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~~~~--------------l~~~~~~v~~~~~~s~dg~~l~~~~~~~~ 402 (741)
T 2ecf_A 337 PLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGKAAA--------------LTHGNWSVDELLAVDEKAGLAYFRAGIES 402 (741)
T ss_dssp CCCSCCEECTTSCEEEEECTTSSCEEEEECSSSCEEE--------------SCCSSSCEEEEEEEETTTTEEEEEECSSC
T ss_pred CcCCceEECCCCeEEEEecCCCccEEEEEcCCCCeee--------------eeecceEEEeEeEEeCCCCEEEEEEeCCC
Confidence 446889999999999999999888887652211221 13345567777 59999997764 55555
Q ss_pred --eEEEEEc
Q 001366 1085 --CIKVLQM 1091 (1092)
Q Consensus 1085 --~V~vW~l 1091 (1092)
.++||++
T Consensus 403 ~~~~~l~~~ 411 (741)
T 2ecf_A 403 ARESQIYAV 411 (741)
T ss_dssp TTCBEEEEE
T ss_pred CceEEEEEE
Confidence 8999975
No 387
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.85 E-value=1.3e-19 Score=214.19 Aligned_cols=309 Identities=13% Similarity=0.120 Sum_probs=199.0
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCC--------CCcccccceeeecCCCCeEEEEEecCCCCEEE----E
Q 001366 779 ANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFN--------DSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLA----S 846 (1092)
Q Consensus 779 ~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~--------~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~La----S 846 (1092)
...++.+++++++.++++|+.|+ ++||+...... .......+.....+...|.+++|+|+ +++|+ +
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spd-g~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCD-NLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTT-SCEEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCC-CCEEEEEEec
Confidence 44678899999999999999887 99998643111 01111122234456778999999998 78888 7
Q ss_pred EECCCcEEEEECCCC--------c---eEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCC
Q 001366 847 ADYDGVVKLWDACTG--------Q---TVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIA 914 (1092)
Q Consensus 847 gs~DgtV~IWD~~tg--------~---~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~ 914 (1092)
|+.|++|+|||+.++ + .+..+.+|...|++++|+|.++.+|++|+.||+|++||++++..+.... +..
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~ 193 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV 193 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC
Confidence 889999999998654 2 2556678999999999999558999999999999999999886654443 577
Q ss_pred ceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCC-------CCCeEEEEEcCCCEEE-E-EECCC------e
Q 001366 915 NVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGH-------EKAVSYVKFLDSGTLV-T-ASTDN------K 979 (1092)
Q Consensus 915 ~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H-------~~~V~~v~fs~~~~L~-S-gs~Dg------~ 979 (1092)
.|++++|+|+|. +|++|+.||.|++||++ +. ....+..| ...|.++.|+++..++ + ++.|| .
T Consensus 194 ~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~~-~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~ 270 (434)
T 2oit_A 194 AVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-LQ-EKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPD 270 (434)
T ss_dssp CEEEEEECTTSS-CEEEEETTSCEEEECTT-CC-EEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCE
T ss_pred ceeEEEEcCCCC-EEEEEcCCCcEEEEccC-Cc-ccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCc
Confidence 899999999985 89999999999999998 32 23334333 3379999998554433 3 33443 3
Q ss_pred EEEEEcCCCCCCCCCCCce----eEEEcCCCCCeEEEEEecCCCEEEEEe-cCCcEEEEeCCCCCcee-eeeccccCCCC
Q 001366 980 LKLWDLKRTSHTGPSTNAC----SLTFSGHTNEKNFVGLSTADGYIACGS-ESNEVYAYHRSLPMPIT-SYKFGSIDPIS 1053 (1092)
Q Consensus 980 I~vWDl~~~~~~~~~~~~~----~~~l~~h~~~V~~v~~spdg~~lasgs-~Dg~I~Iwd~~~~~~i~-~~~~~~~~~i~ 1053 (1092)
+++||+++..........+ ...+.+...+-..+.+-++.+++++++ ..+.|.|.......... ...........
T Consensus 271 v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~~~~~~~~~~~~~d~~ra~ 350 (434)
T 2oit_A 271 VVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQSDQINWESWLLEDSSRAE 350 (434)
T ss_dssp EEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEECTTSSCEEEEEECGGGCCB
T ss_pred eEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEecCCCCccEEEecccccccc
Confidence 8999998643211100000 011113333434445557767665554 45667777654321111 11100000000
Q ss_pred CccccCCCCCCEEEEEEe---------------CCCCEEEEEecCCeEEEEEcC
Q 001366 1054 GKETDDDNGLFVSSVCWR---------------RRSDMVVAANSSGCIKVLQMV 1092 (1092)
Q Consensus 1054 ~~~~~~~h~~~V~sva~s---------------pd~~~Lasgs~DG~V~vW~lv 1092 (1092)
-....++....+.++++. |-..+|..-+.||.+..|.++
T Consensus 351 lP~~~~~~dt~piG~~~d~~~~~~v~~~~~~~~~p~P~l~~l~~~G~L~~~~~~ 404 (434)
T 2oit_A 351 LPVTDKSDDSLPMGVVVDYTNQVEITISDEKTLPPAPVLMLLSTDGVLCPFYMI 404 (434)
T ss_dssp CCBCTTSCBCCEEEEEEECCCCCCEEEETTEEECCCCEEEEEETTSEEEEEEEE
T ss_pred ccCCCCCCCceeeEEEEEccCCceeecCccccCCCCCEEEEECCCCEEEEEEEE
Confidence 000011122233333332 234678889999999999875
No 388
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.85 E-value=4.8e-19 Score=199.33 Aligned_cols=270 Identities=9% Similarity=0.057 Sum_probs=184.1
Q ss_pred EcCCeEEEEEccc-ceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCC-CcEEEEEcCCCCCCCcccccceeeecCC
Q 001366 751 FFDGLCKYARYSK-FEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS-KKIKIFEFNALFNDSVDVYYPAVEMSNR 828 (1092)
Q Consensus 751 ~~D~~~k~w~~~~-~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D-~~I~Iwd~~~~~~~~~~~~~~~~~~~h~ 828 (1092)
..|+.+.+|++.. .... .+. ...|...+.+++|+|+|++|++++.+ +.|.+|++..... . ..........
T Consensus 12 ~~~~~v~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~-~---~~~~~~~~~~ 83 (343)
T 1ri6_A 12 PESQQIHVWNLNHEGALT-LTQ---VVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDG-A---LTFAAESALP 83 (343)
T ss_dssp GGGTEEEEEEECTTSCEE-EEE---EEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTC-C---EEEEEEEECS
T ss_pred CCCCeEEEEEECCCCcEE-Eee---eEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCC-c---eeeccccccC
Confidence 4688999998742 1111 111 12456678889999999999988876 8999999872110 0 1111122223
Q ss_pred CCeEEEEEecCCCCEEEEEE-CCCcEEEEECC---CCceEEEeeccCccEEEEEEecCCCCEEEEEe-CCCcEEEEecCC
Q 001366 829 SKLSCVCWNNYIKNYLASAD-YDGVVKLWDAC---TGQTVSHYIEHEKRAWSVDFSQVHPTKLASGS-DDCSVKLWNINE 903 (1092)
Q Consensus 829 ~~V~~v~~sp~~~~~LaSgs-~DgtV~IWD~~---tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs-~Dg~I~iWDl~~ 903 (1092)
..+.+++|+|+ +++|++++ .++.|.+||+. +++.+..+..+ ..+.+++|+| +++.+++++ .|+.|.+||+.+
T Consensus 84 ~~~~~~~~s~d-g~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 84 GSLTHISTDHQ-GQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISP-DNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp SCCSEEEECTT-SSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECT-TSSEEEEEEGGGTEEEEEEECT
T ss_pred CCCcEEEEcCC-CCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECC-CCCEEEEecCCCCEEEEEEecC
Confidence 47899999998 77666555 48899999994 33455555543 4588999999 777777776 899999999987
Q ss_pred -Cceee----eEe--cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCC--CCcc-eEEec----CC--CCCeEEEEEc-
Q 001366 904 -KNSLA----TIK--NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRN--ARAP-WCVLA----GH--EKAVSYVKFL- 966 (1092)
Q Consensus 904 -~~~l~----~l~--~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~--~~~~-~~~l~----~H--~~~V~~v~fs- 966 (1092)
++... .+. ....+.+++|+|++..+++++..++.|.+||+.. +... ..... ++ ...+..++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 240 (343)
T 1ri6_A 161 DGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP 240 (343)
T ss_dssp TSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT
T ss_pred CCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC
Confidence 54432 222 3457889999999975556666899999999964 2211 11111 11 2357789998
Q ss_pred CCCEEE-EEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEe-cCCcEEEEeCC
Q 001366 967 DSGTLV-TASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGS-ESNEVYAYHRS 1036 (1092)
Q Consensus 967 ~~~~L~-Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs-~Dg~I~Iwd~~ 1036 (1092)
++++|+ ++..++.|.+||+..... ....+..+..+.. +..++|+|+|++|++++ .++.|.+|++.
T Consensus 241 dg~~l~v~~~~~~~i~v~d~~~~~~----~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 241 DGRHLYACDRTASLITVFSVSEDGS----VLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTSC----CEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCCEEEEEecCCCEEEEEEEcCCCC----ceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 455666 555799999999973110 1233444554444 88899999999888877 68999999543
No 389
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=2.6e-19 Score=225.32 Aligned_cols=313 Identities=9% Similarity=0.023 Sum_probs=220.8
Q ss_pred ccCCCCcE--EeEc-CC-----eEEEEEcccceEEeeEEeeeecCCC----------------------CCEEEEEEcCC
Q 001366 741 IQNPTDRL--GAFF-DG-----LCKYARYSKFEVQGMLRTGEFNNSA----------------------NVICSISFDRD 790 (1092)
Q Consensus 741 ~~~~~~~l--~~~~-D~-----~~k~w~~~~~~~~~~l~~~~l~~h~----------------------~~V~sl~fspd 790 (1092)
.++|++.. .+.. |+ .+.+|+....+....+.. ..+. ..|.+++|+||
T Consensus 43 ~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpD 119 (741)
T 2ecf_A 43 KVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDS---KVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPD 119 (741)
T ss_dssp EECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECG---GGTC--------------------CCEESCCCEECTT
T ss_pred eEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccch---hhcccccccccchhhhhhhhhhhccccCcceeEECCC
Confidence 35777654 3344 77 899999877665544431 1111 23788999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeecc
Q 001366 791 EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEH 870 (1092)
Q Consensus 791 g~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h 870 (1092)
|++|++++. +.|.+||+.+.... .......+...+.+++|+|+ +++|++++ ++.|++||+.+++.......+
T Consensus 120 g~~l~~~~~-~~i~~~d~~~~~~~-----~~~~l~~~~~~~~~~~~SPD-G~~la~~~-~~~i~~~d~~~g~~~~~~~~~ 191 (741)
T 2ecf_A 120 AQRLLFPLG-GELYLYDLKQEGKA-----AVRQLTHGEGFATDAKLSPK-GGFVSFIR-GRNLWVIDLASGRQMQLTADG 191 (741)
T ss_dssp SSEEEEEET-TEEEEEESSSCSTT-----SCCBCCCSSSCEEEEEECTT-SSEEEEEE-TTEEEEEETTTTEEEECCCCC
T ss_pred CCEEEEEeC-CcEEEEECCCCCcc-----eEEEcccCCcccccccCCCC-CCEEEEEe-CCcEEEEecCCCCEEEeccCC
Confidence 999999986 89999998753000 11122345678999999998 88888887 569999999988766554444
Q ss_pred Ccc----------------EEEEEEecCCCCEEEEEeCCC---------------------------------cEEEEec
Q 001366 871 EKR----------------AWSVDFSQVHPTKLASGSDDC---------------------------------SVKLWNI 901 (1092)
Q Consensus 871 ~~~----------------V~sv~fsp~~~~~laSgs~Dg---------------------------------~I~iWDl 901 (1092)
... +.+++|+| +++.|++++.|+ .|.+||+
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred ccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 332 47899999 889999988776 7899999
Q ss_pred CC-CceeeeE---ecCCceEEEEEccCCCeEEEEEE-----CCCeEEEEEcCCCCcceEEecCCCC----CeEEEEEc-C
Q 001366 902 NE-KNSLATI---KNIANVCCVQFSAHSSHLLAFGS-----ADYRTYCYDLRNARAPWCVLAGHEK----AVSYVKFL-D 967 (1092)
Q Consensus 902 ~~-~~~l~~l---~~~~~V~sl~fsp~~~~~latgs-----~Dg~I~vwDlr~~~~~~~~l~~H~~----~V~~v~fs-~ 967 (1092)
.+ ++..... .+...+.+++| |+|. .|++++ .+..|++||+.+++. ...+..|.. .+..++|+ +
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~-pDg~-~l~~~~~~~~~~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~~~~~~~spd 347 (741)
T 2ecf_A 271 AEQAQTQWIDLGKEQDIYLARVNW-RDPQ-HLSFQRQSRDQKKLDLVEVTLASNQQ-RVLAHETSPTWVPLHNSLRFLDD 347 (741)
T ss_dssp STTCCCEEECCCSCSSEEEEEEEE-EETT-EEEEEEEETTSSEEEEEEEETTTCCE-EEEEEEECSSCCCCCSCCEECTT
T ss_pred CCCCceEEecCCCCcceEEEEEEe-CCCC-EEEEEEecccCCeEEEEEEECCCCce-EEEEEcCCCCcCCcCCceEECCC
Confidence 98 7765433 24567899999 9997 555444 367899999998764 334444432 45688998 5
Q ss_pred CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEE-EEecCCCEEEE-EecCC--cEEEEeCCC-CCcee
Q 001366 968 SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFV-GLSTADGYIAC-GSESN--EVYAYHRSL-PMPIT 1042 (1092)
Q Consensus 968 ~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v-~~spdg~~las-gs~Dg--~I~Iwd~~~-~~~i~ 1042 (1092)
++++++++.||.++||.+.. .+. ...+..|...+..+ .|+|+|+.|+. ++.++ .++||++.. +..+.
T Consensus 348 g~~~~~~~~~g~~~l~~~~~-------~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~ 419 (741)
T 2ecf_A 348 GSILWSSERTGFQHLYRIDS-------KGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQ 419 (741)
T ss_dssp SCEEEEECTTSSCEEEEECS-------SSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCE
T ss_pred CeEEEEecCCCccEEEEEcC-------CCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCee
Confidence 66788888999888888762 123 56777788888887 69999997754 45555 899998754 32222
Q ss_pred eeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecC----CeEEEEEc
Q 001366 1043 SYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSS----GCIKVLQM 1091 (1092)
Q Consensus 1043 ~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~D----G~V~vW~l 1091 (1092)
.+ .. ...+.+++|+||++.|+....+ +.+.+|++
T Consensus 420 ~l--------------~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 420 RL--------------SK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp EC--------------CC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred ec--------------cc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence 21 11 3457899999999998876544 45777753
No 390
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=4.2e-19 Score=222.22 Aligned_cols=305 Identities=9% Similarity=0.024 Sum_probs=208.9
Q ss_pred EEeEcCCeEEEEEcccceE--EeeEEeeee-----------cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCC
Q 001366 748 LGAFFDGLCKYARYSKFEV--QGMLRTGEF-----------NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFND 814 (1092)
Q Consensus 748 l~~~~D~~~k~w~~~~~~~--~~~l~~~~l-----------~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~ 814 (1092)
+....|+ + +|+..+.+. ...+....+ ..+...|.+++|+|| .+++.+. +++|++||+.+.
T Consensus 39 ~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~--- 111 (706)
T 2z3z_A 39 VFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QGGLVGFDMLAR--- 111 (706)
T ss_dssp EEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TTEEEEEETTTT---
T ss_pred EEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CCEEEEEECCCC---
Confidence 3444455 7 888776655 322222111 011256999999999 6666654 699999998652
Q ss_pred CcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCC-----CceEEEeeccCcc--------------EE
Q 001366 815 SVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACT-----GQTVSHYIEHEKR--------------AW 875 (1092)
Q Consensus 815 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~t-----g~~i~~l~~h~~~--------------V~ 875 (1092)
.......+...+.+++|+|+ ++.|+++ .|+.|++||+.+ ++.......+... +.
T Consensus 112 -----~~~~l~~~~~~~~~~~~Spd-G~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~ 184 (706)
T 2z3z_A 112 -----KVTYLFDTNEETASLDFSPV-GDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEK 184 (706)
T ss_dssp -----EEEEEECCTTCCTTCEECTT-SSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCC
T ss_pred -----ceEEccCCcccccCCcCCCC-CCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCc
Confidence 11223345677899999998 8888885 689999999998 8766544444332 48
Q ss_pred EEEEecCCCCEEEEEe---------------------------------CCCcEEEEecCCCceeeeEe---cCCceEEE
Q 001366 876 SVDFSQVHPTKLASGS---------------------------------DDCSVKLWNINEKNSLATIK---NIANVCCV 919 (1092)
Q Consensus 876 sv~fsp~~~~~laSgs---------------------------------~Dg~I~iWDl~~~~~l~~l~---~~~~V~sl 919 (1092)
++.|+| +++.|++++ .+..|.+||+.+++...... +...+.++
T Consensus 185 ~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 263 (706)
T 2z3z_A 185 GTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNL 263 (706)
T ss_dssp SEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEE
T ss_pred eEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeE
Confidence 999999 899999987 44679999999887654432 34678999
Q ss_pred EEccCCCeEEEEEECCC-----eEEEEEcCCCCcceEEec-CCCC---CeEEEEEcC--C-CEEEEEECCCeEEEEEcCC
Q 001366 920 QFSAHSSHLLAFGSADY-----RTYCYDLRNARAPWCVLA-GHEK---AVSYVKFLD--S-GTLVTASTDNKLKLWDLKR 987 (1092)
Q Consensus 920 ~fsp~~~~~latgs~Dg-----~I~vwDlr~~~~~~~~l~-~H~~---~V~~v~fs~--~-~~L~Sgs~Dg~I~vWDl~~ 987 (1092)
+|+|+|. .|++++.++ .|++||+.+++....... .+.. .+..+.|++ + .++++++.|+.++||++..
T Consensus 264 ~~spdg~-~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~ 342 (706)
T 2z3z_A 264 SWSPDEN-ILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDT 342 (706)
T ss_dssp EECTTSS-EEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEET
T ss_pred EEECCCC-EEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEEC
Confidence 9999996 677766665 999999998733222222 2222 246788986 4 4677888899999998862
Q ss_pred CCCCCCCCCceeEEEcCCCCCeEE-EEEecCCCEEEEEec-CC----cEEEEeCCCCCceeeeeccccCCCCCccccCCC
Q 001366 988 TSHTGPSTNACSLTFSGHTNEKNF-VGLSTADGYIACGSE-SN----EVYAYHRSLPMPITSYKFGSIDPISGKETDDDN 1061 (1092)
Q Consensus 988 ~~~~~~~~~~~~~~l~~h~~~V~~-v~~spdg~~lasgs~-Dg----~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h 1061 (1092)
.+.....+..|...+.. ++|+|+|+.|+.++. ++ .|+.|+...+.. ..+ .+
T Consensus 343 -------~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~-~~l---------------~~ 399 (706)
T 2z3z_A 343 -------TGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKT-KDL---------------TP 399 (706)
T ss_dssp -------TSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCC-EES---------------CC
T ss_pred -------CCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCc-eec---------------cC
Confidence 23456677778777876 799999997766554 44 677777665442 111 13
Q ss_pred CCCEEEEEEeCCCCEEEEEecC----CeEEEEEc
Q 001366 1062 GLFVSSVCWRRRSDMVVAANSS----GCIKVLQM 1091 (1092)
Q Consensus 1062 ~~~V~sva~spd~~~Lasgs~D----G~V~vW~l 1091 (1092)
...+.+++|+||+++|+.++.+ +.|++|++
T Consensus 400 ~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 400 ESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp SSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred CCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 4568999999999998877554 56999985
No 391
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.84 E-value=3.8e-19 Score=199.56 Aligned_cols=262 Identities=11% Similarity=-0.015 Sum_probs=191.7
Q ss_pred CEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCC-CeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeec-
Q 001366 792 DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRS-KLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIE- 869 (1092)
Q Consensus 792 ~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~-~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~- 869 (1092)
++|++++.+++|.+||..+.. .......++.. .+.+++|+|++..++++++.++.|.+||+.+++.+..+..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~------~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~ 75 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMA------VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLS 75 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTE------EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECC
T ss_pred cEEEEcCCCCeEEEEECCCCc------EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcC
Confidence 478999999999999986521 11111112221 5789999998334556667789999999999998877653
Q ss_pred c----CccEEEEEEecCCCCEEEEEe------------CCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEE
Q 001366 870 H----EKRAWSVDFSQVHPTKLASGS------------DDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGS 933 (1092)
Q Consensus 870 h----~~~V~sv~fsp~~~~~laSgs------------~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs 933 (1092)
+ ...+.+++|+| +++.+++++ .++.|.+||+.+++.+..+.....+.+++|+|++. +++++
T Consensus 76 ~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~- 152 (337)
T 1pby_B 76 TPEERVKSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGS-KLYGL- 152 (337)
T ss_dssp BTTEEEECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSS-CEEEE-
T ss_pred CcccccccccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCC-EEEEe-
Confidence 2 23577899999 888888876 57999999999998888888777788999999996 45555
Q ss_pred CCCeEEEEEcCCCCcceEEecCCC--CCeEEEEEc-CCCEEEEEE-CCC-----------------------eEEEEEcC
Q 001366 934 ADYRTYCYDLRNARAPWCVLAGHE--KAVSYVKFL-DSGTLVTAS-TDN-----------------------KLKLWDLK 986 (1092)
Q Consensus 934 ~Dg~I~vwDlr~~~~~~~~l~~H~--~~V~~v~fs-~~~~L~Sgs-~Dg-----------------------~I~vWDl~ 986 (1092)
++.|++||+.+++. ...+..+. ..+ .|+ ++..++.++ .++ .|.+||+.
T Consensus 153 -~~~i~~~d~~~~~~-~~~~~~~~~~~~~---~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 227 (337)
T 1pby_B 153 -GRDLHVMDPEAGTL-VEDKPIQSWEAET---YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE 227 (337)
T ss_dssp -SSSEEEEETTTTEE-EEEECSTTTTTTT---BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETT
T ss_pred -CCeEEEEECCCCcE-eeeeeccccCCCc---eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCC
Confidence 68999999988753 33443332 222 455 333333322 222 57899998
Q ss_pred CCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEE
Q 001366 987 RTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVS 1066 (1092)
Q Consensus 987 ~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~ 1066 (1092)
+... ....+..+...+.+++|+|+|++++++ ++.|++||..+++.+..+.. ...+.
T Consensus 228 ~~~~-------~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~---------------~~~~~ 283 (337)
T 1pby_B 228 TGEM-------AMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL---------------PHSYY 283 (337)
T ss_dssp TCCE-------EEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC---------------SSCCC
T ss_pred CCCc-------eEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC---------------CCcee
Confidence 4321 133455566778899999999998888 68999999998887766542 13468
Q ss_pred EEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1067 SVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1067 sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
+++|+|++++|++++.++.|++|++
T Consensus 284 ~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 284 SVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp EEEECTTSCEEEEESBSSEEEEEET
T ss_pred eEEECCCCCEEEEEcCCCcEEEEEC
Confidence 8999999999999999999999986
No 392
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=6.6e-19 Score=192.77 Aligned_cols=254 Identities=8% Similarity=0.002 Sum_probs=185.7
Q ss_pred EcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCC-CCCCCcccccceeeecC-C
Q 001366 751 FFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNA-LFNDSVDVYYPAVEMSN-R 828 (1092)
Q Consensus 751 ~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~-~~~~~~~~~~~~~~~~h-~ 828 (1092)
..|+.+.+|+....+... +..|...|.+++|+|+|++|++++ ++.|.+||+.. .... .....+ .
T Consensus 19 ~~~~~i~~~d~~~~~~~~------~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~-------~~~~~~~~ 84 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRV------VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE-------KVDTGFAT 84 (297)
T ss_dssp CCCEEEEEEETTTTEEEE------EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCE-------ECCCTTCC
T ss_pred CcceeEEEEeCCCCceee------eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCce-------Eecccccc
Confidence 467788999987765442 234678899999999999999987 78999999865 2211 111122 4
Q ss_pred CCeEEEEEecCCCCEEEEEE--CCCcEEEEE--CCCCceEEEeeccCccEEEEEEecCCCCEEE-EEeCCCcEEEEecC-
Q 001366 829 SKLSCVCWNNYIKNYLASAD--YDGVVKLWD--ACTGQTVSHYIEHEKRAWSVDFSQVHPTKLA-SGSDDCSVKLWNIN- 902 (1092)
Q Consensus 829 ~~V~~v~~sp~~~~~LaSgs--~DgtV~IWD--~~tg~~i~~l~~h~~~V~sv~fsp~~~~~la-Sgs~Dg~I~iWDl~- 902 (1092)
..|.+++|+|+ +.+|++++ .++.++||. ..+++ ...+..+. .+.+++|+| ++..|+ +++.|+.++||++.
T Consensus 85 ~~~~~~~~spd-g~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 85 ICNNDHGISPD-GALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSP-DGKSFTYCGIRDQVFDIYSMDI 160 (297)
T ss_dssp CBCSCCEECTT-SSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEECT-TSSEEEEEEEETTEEEEEEEET
T ss_pred ccccceEECCC-CCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEECC-CCCEEEEEECCCCceEEEEEEC
Confidence 67899999998 88899888 334555555 44544 34444443 488999999 777665 88899999999964
Q ss_pred -CCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECC---
Q 001366 903 -EKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTD--- 977 (1092)
Q Consensus 903 -~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~D--- 977 (1092)
++.......+...+.+++|+|++..+++++..++.+++|++.........+..|...+.++.|+ ++.+|++++.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 240 (297)
T 2ojh_A 161 DSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADV 240 (297)
T ss_dssp TTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTC
T ss_pred CCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCC
Confidence 3444333346678999999999974444555699999999874334567777888889999998 66778877765
Q ss_pred --------CeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCC
Q 001366 978 --------NKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESN 1028 (1092)
Q Consensus 978 --------g~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg 1028 (1092)
+.|.+||+.+.. ...+..+.+|...+..++|+|+|++|++++.+.
T Consensus 241 ~~~~~~~~~~l~~~d~~~~~------~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 241 FDHPRDLDVRVQLMDMDGGN------VETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CSCCSSEEEEEEEEETTSCS------CEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CcccccCceEEEEEecCCCC------ceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 569999998432 233455557888899999999999998887654
No 393
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.82 E-value=8.6e-19 Score=219.75 Aligned_cols=312 Identities=9% Similarity=-0.052 Sum_probs=207.1
Q ss_pred ccCCCCcE-EeEcCCeEEEEEcccceEEeeEEeeeecCCCC---CEEEEEEcCCCCEEEEEeCC---------CcEEEEE
Q 001366 741 IQNPTDRL-GAFFDGLCKYARYSKFEVQGMLRTGEFNNSAN---VICSISFDRDEDHFAAAGVS---------KKIKIFE 807 (1092)
Q Consensus 741 ~~~~~~~l-~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~---~V~sl~fspdg~~latgg~D---------~~I~Iwd 807 (1092)
.++|++.+ ....|+++++|+....+....+ .+|.. .|.+++|+|||++||+++.+ +.|.+||
T Consensus 23 ~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~-----~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d 97 (723)
T 1xfd_A 23 KWISDTEFIYREQKGTVRLWNVETNTSTVLI-----EGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSK 97 (723)
T ss_dssp CBSSSSCBCCCCSSSCEEEBCGGGCCCEEEE-----CTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred EEcCCCcEEEEeCCCCEEEEECCCCcEEEEe-----ccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEE
Confidence 35666554 2347889999998776554333 34443 48999999999999999875 6788999
Q ss_pred cCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccE-------------
Q 001366 808 FNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRA------------- 874 (1092)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V------------- 874 (1092)
+.+.... .......+...+.+++|+|+ ++.||+++. +.|++||+.+++.......+...+
T Consensus 98 ~~~~~~~-----~l~~~~~~~~~~~~~~~SPd-G~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee 170 (723)
T 1xfd_A 98 IPHGDPQ-----SLDPPEVSNAKLQYAGWGPK-GQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEE 170 (723)
T ss_dssp SSSCCCE-----ECCCTTCCSCCCSBCCBCSS-TTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHT
T ss_pred CCCCceE-----eccCCccccccccccEECCC-CCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEE
Confidence 8763210 00111234455889999998 888888875 799999999988776655544333
Q ss_pred -----EEEEEecCCCCEEEEEeCCC----------------------------------cEEEEecCCCceeeeEec---
Q 001366 875 -----WSVDFSQVHPTKLASGSDDC----------------------------------SVKLWNINEKNSLATIKN--- 912 (1092)
Q Consensus 875 -----~sv~fsp~~~~~laSgs~Dg----------------------------------~I~iWDl~~~~~l~~l~~--- 912 (1092)
.+++|+| +++.|++++.|+ .|++||+.+++....+..
T Consensus 171 ~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~ 249 (723)
T 1xfd_A 171 ILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDD 249 (723)
T ss_dssp TSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCC
T ss_pred eccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCcc
Confidence 7899999 899999888653 799999998886555553
Q ss_pred ----CCceEEEEEccCCCeEEEEEEC----CCeEEEEEcCCCCcceEEe-cCCCCCe----EEEEEc-CCCEEEE--EEC
Q 001366 913 ----IANVCCVQFSAHSSHLLAFGSA----DYRTYCYDLRNARAPWCVL-AGHEKAV----SYVKFL-DSGTLVT--AST 976 (1092)
Q Consensus 913 ----~~~V~sl~fsp~~~~~latgs~----Dg~I~vwDlr~~~~~~~~l-~~H~~~V----~~v~fs-~~~~L~S--gs~ 976 (1092)
...+.+++|+|+|. ++++.+. +..|++||+.+++.. ..+ ..|...+ ..++|+ +++.|+. +..
T Consensus 250 ~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 327 (723)
T 1xfd_A 250 PRMREYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDATTGVCT-KKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIP 327 (723)
T ss_dssp GGGSSEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEETTTCCEE-EEEEEECSSCCCCCCCCCEECTTSCSEEEEEEEC
T ss_pred CCCccceeEEEEEeCCCe-EEEEEEcCCCCeEEEEEEeCCCCcce-EEEEeccCCEEeccCCCceEcCCCCeEEEEEecc
Confidence 45689999999995 6655543 367999999887642 233 2334444 378999 5665553 556
Q ss_pred CC------eEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEE-EEEecCCCEEEEEecC---CcEEEEeCCCCCceeeeec
Q 001366 977 DN------KLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNF-VGLSTADGYIACGSES---NEVYAYHRSLPMPITSYKF 1046 (1092)
Q Consensus 977 Dg------~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~-v~~spdg~~lasgs~D---g~I~Iwd~~~~~~i~~~~~ 1046 (1092)
++ .|.+||+..... ..+...+..+...+.. ++|+|||++|+..+.+ +.+++|++..........
T Consensus 328 ~~~~~~~~~l~~~d~~~~~~-----~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~- 401 (723)
T 1xfd_A 328 QGGRGKFYHITVSSSQPNSS-----NDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQC- 401 (723)
T ss_dssp CSSSSCEEEEEEECSSCCSS-----SCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBC-
T ss_pred cCCCcceeEEEEEeccCCCC-----ccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcce-
Confidence 77 466677321111 0012333333334444 6999999998766654 789999876432110000
Q ss_pred cccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEe
Q 001366 1047 GSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAAN 1081 (1092)
Q Consensus 1047 ~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs 1081 (1092)
+.+ ...|...+..++|+||+++|+...
T Consensus 402 -----l~~---~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 402 -----LSC---DLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp -----SST---TSSSSCCCCEEEECTTSSEEEEEC
T ss_pred -----ecc---cccCCCCeEEEEECCCCCEEEEEc
Confidence 000 001456688999999999888654
No 394
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.82 E-value=1.9e-18 Score=226.35 Aligned_cols=312 Identities=11% Similarity=0.088 Sum_probs=227.0
Q ss_pred ccCCCCcEEeEc------CC--eEEEEEcccceEEeeEEeeeecCCCCCE-------EEEEEcCCCCEEEEEeCC-----
Q 001366 741 IQNPTDRLGAFF------DG--LCKYARYSKFEVQGMLRTGEFNNSANVI-------CSISFDRDEDHFAAAGVS----- 800 (1092)
Q Consensus 741 ~~~~~~~l~~~~------D~--~~k~w~~~~~~~~~~l~~~~l~~h~~~V-------~sl~fspdg~~latgg~D----- 800 (1092)
.++|++...++. ++ .+.+|+....+. ..+..|...+ .+++|+|||+++++++.+
T Consensus 59 ~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~------~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~ 132 (1045)
T 1k32_A 59 RFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEI------KRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSS 132 (1045)
T ss_dssp EECTTSSEEEEEEEESTTCCEEEEEEEETTTTEE------EECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTT
T ss_pred EECCCCCEEEEEEeeccCCCCCeEEEEECCCCCe------EEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcc
Confidence 467887654432 23 577787765432 2356788888 899999999977777754
Q ss_pred -CcEEEEEcCCCCCCCccc------------------------------------------ccceeeecCCCCeEEEEEe
Q 001366 801 -KKIKIFEFNALFNDSVDV------------------------------------------YYPAVEMSNRSKLSCVCWN 837 (1092)
Q Consensus 801 -~~I~Iwd~~~~~~~~~~~------------------------------------------~~~~~~~~h~~~V~~v~~s 837 (1092)
..|.+|++.......... .......+|...+.++.|+
T Consensus 133 ~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s 212 (1045)
T 1k32_A 133 MTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIV 212 (1045)
T ss_dssp CCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEE
T ss_pred cceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEe
Confidence 347777764321000000 0001124577889999999
Q ss_pred cCCCCEEEEEECCCcEEEEECCC-CceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEec----
Q 001366 838 NYIKNYLASADYDGVVKLWDACT-GQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKN---- 912 (1092)
Q Consensus 838 p~~~~~LaSgs~DgtV~IWD~~t-g~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~---- 912 (1092)
++ .++++++.|++++||.+.. +.....+..|. .+..++|+| ++..|+++ .++.|.+||+.. ..+..+..
T Consensus 213 ~d--~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~Sp-DG~~la~~-~~~~i~~~d~~~-~~l~~l~~~~~~ 286 (1045)
T 1k32_A 213 GH--RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNT-DGRRILFS-KGGSIYIFNPDT-EKIEKIEIGDLE 286 (1045)
T ss_dssp TT--EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEE-SSSCEEEE-ETTEEEEECTTT-CCEEECCCCCCC
T ss_pred CC--EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcC-CCCEEEEE-eCCEEEEecCCc-eEeeeeccCccc
Confidence 85 6777888899999998753 44555666565 466789999 88888887 489999999954 33434433
Q ss_pred --------CCceEEEEEc-cCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCC-CeEEEEEcCCCEEEEEECCCeEE-
Q 001366 913 --------IANVCCVQFS-AHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEK-AVSYVKFLDSGTLVTASTDNKLK- 981 (1092)
Q Consensus 913 --------~~~V~sl~fs-p~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~-~V~~v~fs~~~~L~Sgs~Dg~I~- 981 (1092)
...+.+++|+ |+|. .+++++ ++.|++||+..+. ...+..|.. .+..++|++++.|++++.++.|.
T Consensus 287 ~~~~~~~~~~~v~~~~~S~pdG~-~la~~~-~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~ 362 (1045)
T 1k32_A 287 SPEDRIISIPSKFAEDFSPLDGD-LIAFVS-RGQAFIQDVSGTY--VLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLG 362 (1045)
T ss_dssp BCCSEEEECGGGGEEEEEECGGG-CEEEEE-TTEEEEECTTSSB--EEECSCCSCEEEEEECSSSEEEEEEEETTEEEEE
T ss_pred ccccccccccccceeeecCCCCC-EEEEEE-cCEEEEEcCCCCc--eEEccCCCcceEEeeeEcCCCeEEEEECCCceEE
Confidence 2268999999 9996 666666 8899999998654 345667777 89999999555788888888888
Q ss_pred EEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCC
Q 001366 982 LWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDN 1061 (1092)
Q Consensus 982 vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h 1061 (1092)
+||+... . ...+.+|...+..++|||||++|++++.++.|++||+.+++..... .+|
T Consensus 363 ~~d~~~~--------~-~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~--------------~~~ 419 (1045)
T 1k32_A 363 IYDYRTG--------K-AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE--------------RSR 419 (1045)
T ss_dssp EEETTTC--------C-EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE--------------ECS
T ss_pred EEECCCC--------C-ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEec--------------cCC
Confidence 8998732 2 3344478888999999999999999999999999999887755433 245
Q ss_pred CCCEEEEEEeCCCCEEEEEecCC----------eEEEEEc
Q 001366 1062 GLFVSSVCWRRRSDMVVAANSSG----------CIKVLQM 1091 (1092)
Q Consensus 1062 ~~~V~sva~spd~~~Lasgs~DG----------~V~vW~l 1091 (1092)
...|.+++|+|||++|++++.++ .|++|++
T Consensus 420 ~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~ 459 (1045)
T 1k32_A 420 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM 459 (1045)
T ss_dssp SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred CCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEEC
Confidence 66789999999999999887754 8999986
No 395
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.81 E-value=3.2e-19 Score=223.66 Aligned_cols=275 Identities=9% Similarity=0.017 Sum_probs=190.1
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCC---CeEEEEEecCCCCEEEEEECC--------
Q 001366 782 ICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRS---KLSCVCWNNYIKNYLASADYD-------- 850 (1092)
Q Consensus 782 V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~---~V~~v~~sp~~~~~LaSgs~D-------- 850 (1092)
+.+++|+|||+++++ +.|++|++||+.+.. .......|.. .|.+++|+|+ +++|++++.+
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~-------~~~~~~~~~~~~~~v~~~~~SpD-g~~l~~~~~~~~~~~~~~ 89 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNT-------STVLIEGKKIESLRAIRYEISPD-REYALFSYNVEPIYQHSY 89 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCC-------CEEEECTTTTTTTTCSEEEECTT-SSEEEEEESCCCCSSSCC
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCc-------EEEEeccccccccccceEEECCC-CCEEEEEecCccceeecc
Confidence 566899999998776 789999999987521 1112222333 4899999998 8899998775
Q ss_pred -CcEEEEECCCCceEEEee---ccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEec-CCc----------
Q 001366 851 -GVVKLWDACTGQTVSHYI---EHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKN-IAN---------- 915 (1092)
Q Consensus 851 -gtV~IWD~~tg~~i~~l~---~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~-~~~---------- 915 (1092)
+.|++||+.+++. ..+. +|...+.+++|+| +++.||+++. +.|++||+.+++....... ...
T Consensus 90 ~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v 166 (723)
T 1xfd_A 90 TGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWL 166 (723)
T ss_dssp CSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHH
T ss_pred eeeEEEEECCCCce-EeccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECccccee
Confidence 7888999998876 3343 3455588999999 8999999886 7999999998877665543 222
Q ss_pred --------eEEEEEccCCCeEEEEEECCC----------------------------------eEEEEEcCCCCcceEEe
Q 001366 916 --------VCCVQFSAHSSHLLAFGSADY----------------------------------RTYCYDLRNARAPWCVL 953 (1092)
Q Consensus 916 --------V~sl~fsp~~~~~latgs~Dg----------------------------------~I~vwDlr~~~~~~~~l 953 (1092)
+.+++|+|+|. .|++++.|+ .|++||+.+++. ...+
T Consensus 167 ~~ee~~~~~~~~~~SpDg~-~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~-~~~l 244 (723)
T 1xfd_A 167 YEEEILKTHIAHWWSPDGT-RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH-DLEM 244 (723)
T ss_dssp HHHTTSSSSEEEEECTTSS-EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC-CEEC
T ss_pred EEEEeccCcceEEECCCCC-EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce-eEEe
Confidence 37899999996 666666442 899999987653 2344
Q ss_pred cCC------CCCeEEEEEcCC-CEEEEEEC----CCeEEEEEcCCCCCCCCCCCceeEEEcC-CCCCeE----EEEEecC
Q 001366 954 AGH------EKAVSYVKFLDS-GTLVTAST----DNKLKLWDLKRTSHTGPSTNACSLTFSG-HTNEKN----FVGLSTA 1017 (1092)
Q Consensus 954 ~~H------~~~V~~v~fs~~-~~L~Sgs~----Dg~I~vWDl~~~~~~~~~~~~~~~~l~~-h~~~V~----~v~~spd 1017 (1092)
..+ ...+..++|+++ +.|++.+. +..|.+||+.+ +.+...+.. +...+. .++|+||
T Consensus 245 ~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~--------g~~~~~~~~~~~~~~~~~~~~~~~spd 316 (723)
T 1xfd_A 245 MPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATT--------GVCTKKHEDESEAWLHRQNEEPVFSKD 316 (723)
T ss_dssp CCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT--------CCEEEEEEEECSSCCCCCCCCCEECTT
T ss_pred eCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC--------CcceEEEEeccCCEEeccCCCceEcCC
Confidence 443 567899999954 45555543 35799999984 334444332 334343 7899999
Q ss_pred CCEEEE--EecCC------cEEEEe-CCCCCc--eeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecC---
Q 001366 1018 DGYIAC--GSESN------EVYAYH-RSLPMP--ITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSS--- 1083 (1092)
Q Consensus 1018 g~~las--gs~Dg------~I~Iwd-~~~~~~--i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~D--- 1083 (1092)
|+.|+. +..++ .|++|+ ...+.. +..+ ..++...+..++|+||++.|+..+.+
T Consensus 317 g~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l-------------~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 383 (723)
T 1xfd_A 317 GRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSI-------------TSGDWDVTKILAYDEKGNKIYFLSTEDLP 383 (723)
T ss_dssp SCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBS-------------CCSSSCEEEEEEEETTTTEEEEEESSSCT
T ss_pred CCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEe-------------ecCCeEEEeeeEEcCCCCEEEEEEcCCCC
Confidence 997664 44566 567777 333321 1111 11222223347999999999876655
Q ss_pred CeEEEEEc
Q 001366 1084 GCIKVLQM 1091 (1092)
Q Consensus 1084 G~V~vW~l 1091 (1092)
+.++||++
T Consensus 384 ~~~~l~~~ 391 (723)
T 1xfd_A 384 RRRQLYSA 391 (723)
T ss_dssp TCCEEEEE
T ss_pred cceEEEEE
Confidence 78999985
No 396
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.81 E-value=3e-18 Score=192.28 Aligned_cols=273 Identities=12% Similarity=-0.004 Sum_probs=199.2
Q ss_pred EEeEcCCeEEEEEcccceEEeeEEeeeecCCCC-CEEEEEEcCCCCEE-EEEeCCCcEEEEEcCCCCCCCcccccceeee
Q 001366 748 LGAFFDGLCKYARYSKFEVQGMLRTGEFNNSAN-VICSISFDRDEDHF-AAAGVSKKIKIFEFNALFNDSVDVYYPAVEM 825 (1092)
Q Consensus 748 l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~-~V~sl~fspdg~~l-atgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~ 825 (1092)
+....++.+.+|+....+....+.. ++.. .+.+++|+|+|+++ ++++.++.|.+||+.+... . .....
T Consensus 5 v~~~~~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~---~---~~~~~ 74 (337)
T 1pby_B 5 LAPARPDKLVVIDTEKMAVDKVITI----ADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET---L---GRIDL 74 (337)
T ss_dssp EEEETTTEEEEEETTTTEEEEEEEC----TTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE---E---EEEEC
T ss_pred EEcCCCCeEEEEECCCCcEEEEEEc----CCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe---E---eeEEc
Confidence 4567889999999988776655442 2221 36779999999865 5555678999999865210 0 00111
Q ss_pred cC----CCCeEEEEEecCCCCEEEEEE------------CCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEE
Q 001366 826 SN----RSKLSCVCWNNYIKNYLASAD------------YDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLAS 889 (1092)
Q Consensus 826 ~h----~~~V~~v~~sp~~~~~LaSgs------------~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laS 889 (1092)
.+ ...+.+++|+|+ +++|++++ .++.|.+||+.+++.+..+.. ...+.+++|+| +++.|++
T Consensus 75 ~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~ 151 (337)
T 1pby_B 75 STPEERVKSLFGAALSPD-GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWAR-DGSKLYG 151 (337)
T ss_dssp CBTTEEEECTTCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECT-TSSCEEE
T ss_pred CCcccccccccceEECCC-CCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECC-CCCEEEE
Confidence 11 125678999998 77787776 579999999999988877764 45678899999 7887777
Q ss_pred EeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCC-----------------------eEEEEEcCCC
Q 001366 890 GSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADY-----------------------RTYCYDLRNA 946 (1092)
Q Consensus 890 gs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg-----------------------~I~vwDlr~~ 946 (1092)
+ ++.|.+||+.+++.+..+........+.|+|++..+++++..++ .|.+||+.++
T Consensus 152 ~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 229 (337)
T 1pby_B 152 L--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG 229 (337)
T ss_dssp E--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC
T ss_pred e--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCC
Confidence 7 68899999999988877764332223478999864444443333 4789999987
Q ss_pred CcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEe
Q 001366 947 RAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGS 1025 (1092)
Q Consensus 947 ~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs 1025 (1092)
+.....+..+...+.+++|+ ++.+++++ ++.|.+||+.+ +..+..+..+ ..+.+++|+|+|++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~--------~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~ 298 (337)
T 1pby_B 230 EMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK--------NASIKRVPLP-HSYYSVNVSTDGSTVWLGG 298 (337)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT--------TEEEEEEECS-SCCCEEEECTTSCEEEEES
T ss_pred CceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCC--------CcCcceecCC-CceeeEEECCCCCEEEEEc
Confidence 65433455667788899999 55677776 79999999973 4445555433 4578999999999999899
Q ss_pred cCCcEEEEeCCCCCceeeeec
Q 001366 1026 ESNEVYAYHRSLPMPITSYKF 1046 (1092)
Q Consensus 1026 ~Dg~I~Iwd~~~~~~i~~~~~ 1046 (1092)
.++.|++||..+++.+..+..
T Consensus 299 ~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 299 ALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp BSSEEEEEETTTCCEEEEEEC
T ss_pred CCCcEEEEECcCCcEEEEEEc
Confidence 999999999999988887764
No 397
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.81 E-value=4.7e-18 Score=222.74 Aligned_cols=277 Identities=10% Similarity=0.003 Sum_probs=214.8
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001366 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1092)
Q Consensus 775 l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~ 854 (1092)
+.+|...+.++.|+++ .++++++.|+++.||.+..... .... ..+...+.+++|+|+ ++.|+++ .++.|+
T Consensus 199 l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~------~~~~-l~~~~~~~~~~~SpD-G~~la~~-~~~~i~ 268 (1045)
T 1k32_A 199 IVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGK------DLRK-HTSFTDYYPRHLNTD-GRRILFS-KGGSIY 268 (1045)
T ss_dssp EECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSC------SCEE-CCCCCSSCEEEEEES-SSCEEEE-ETTEEE
T ss_pred CcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCC------cceE-ecCCCCcceeeEcCC-CCEEEEE-eCCEEE
Confidence 3689999999999988 6777888889999998763111 1111 112234677899998 7777777 489999
Q ss_pred EEECCCCceEEEeec-----------cCccEEEEEEe-cCCCCEEEEEeCCCcEEEEecCCCceeeeEecCC-ceEEEEE
Q 001366 855 LWDACTGQTVSHYIE-----------HEKRAWSVDFS-QVHPTKLASGSDDCSVKLWNINEKNSLATIKNIA-NVCCVQF 921 (1092)
Q Consensus 855 IWD~~tg~~i~~l~~-----------h~~~V~sv~fs-p~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~-~V~sl~f 921 (1092)
+||+... .+..+.+ |...+.+++|+ | ++..|++++ ++.|.+|++..+.......+.. .+.+++|
T Consensus 269 ~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (1045)
T 1k32_A 269 IFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGG 345 (1045)
T ss_dssp EECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECS
T ss_pred EecCCce-EeeeeccCcccccccccccccccceeeecCC-CCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeE
Confidence 9999544 4445554 44578999999 9 888888887 7899999999877554334555 7999999
Q ss_pred ccCCCeEEEEEECCCeEE-EEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCcee
Q 001366 922 SAHSSHLLAFGSADYRTY-CYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACS 999 (1092)
Q Consensus 922 sp~~~~~latgs~Dg~I~-vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~ 999 (1092)
+ +|. .|++++.++.+. +||+..... ..+.+|...+..++|+ ++.+|++++.++.|++||+.+ +...
T Consensus 346 s-dg~-~l~~~s~~~~l~~~~d~~~~~~--~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t--------g~~~ 413 (1045)
T 1k32_A 346 D-TKV-AFIHGTREGDFLGIYDYRTGKA--EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET--------GKPT 413 (1045)
T ss_dssp S-SEE-EEEEEETTEEEEEEEETTTCCE--EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT--------CCEE
T ss_pred c-CCC-eEEEEECCCceEEEEECCCCCc--eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCC--------CceE
Confidence 9 874 777888888899 999886542 3445888899999999 677899999999999999983 4455
Q ss_pred EEEcCCCCCeEEEEEecCCCEEEEEecCC----------cEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEE
Q 001366 1000 LTFSGHTNEKNFVGLSTADGYIACGSESN----------EVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVC 1069 (1092)
Q Consensus 1000 ~~l~~h~~~V~~v~~spdg~~lasgs~Dg----------~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva 1069 (1092)
..+.+|...+.+++|||||++|++++.++ .|++||+..++ +.. ...|...+.+++
T Consensus 414 ~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~--------------l~~~~~~~~~~~ 478 (1045)
T 1k32_A 414 VIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFA--------------ATTENSHDYAPA 478 (1045)
T ss_dssp EEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEE--------------CSCSSSBEEEEE
T ss_pred EeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEE--------------eeCCCcccCCce
Confidence 56668888999999999999999887654 89999998765 221 134556788999
Q ss_pred EeCCCCEEEEEecCCeEEEEEc
Q 001366 1070 WRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1070 ~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
|+|||+.|++++.++..++|+.
T Consensus 479 ~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 479 FDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp ECTTSCEEEEEESCCCCCEECS
T ss_pred EcCCCCEEEEEecccCCcCcch
Confidence 9999999999999888777763
No 398
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.80 E-value=1.3e-17 Score=189.58 Aligned_cols=271 Identities=9% Similarity=0.079 Sum_probs=181.1
Q ss_pred CCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEEC--CCcEEEEECCCCc--eEEEeeccCccE
Q 001366 799 VSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADY--DGVVKLWDACTGQ--TVSHYIEHEKRA 874 (1092)
Q Consensus 799 ~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~--DgtV~IWD~~tg~--~i~~l~~h~~~V 874 (1092)
.++.|.+|+++.... .........+...+..++|+|+ +++++++.. ++.|++||+.++. .+..+..+...+
T Consensus 14 ~~~~i~v~~~d~~tg----~~~~~~~~~~~~~p~~~a~spd-g~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p 88 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAK----TLTNDGLLAATQNPTYLALSAK-DCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPP 88 (347)
T ss_dssp SCCEEEEEEEETTTT----EEEEEEEEEECSCCCCEEECTT-CEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCC
T ss_pred CCCCEEEEEEcCCCC----eEEEeeeeeccCCcceEEEccC-CeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCC
Confidence 456788998864211 1111122334566788999998 664444432 6899999997775 455555677888
Q ss_pred EEEEEecCCCCEEEEEe-CCCcEEEEecCC-Cc--eeeeEecC----------CceEEEEEccCCCeEEEEEECCCeEEE
Q 001366 875 WSVDFSQVHPTKLASGS-DDCSVKLWNINE-KN--SLATIKNI----------ANVCCVQFSAHSSHLLAFGSADYRTYC 940 (1092)
Q Consensus 875 ~sv~fsp~~~~~laSgs-~Dg~I~iWDl~~-~~--~l~~l~~~----------~~V~sl~fsp~~~~~latgs~Dg~I~v 940 (1092)
..++|+| +++.|++++ .++.|.+||+.. +. .+..+... ..+.+++|+|++. +++++..++.|++
T Consensus 89 ~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~ 166 (347)
T 3hfq_A 89 AYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYV 166 (347)
T ss_dssp SEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEE
T ss_pred EEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEE
Confidence 9999999 888888777 789999999963 22 23333321 2488999999997 8888888999999
Q ss_pred EEcC-CCCc-ceEEecC-CCCCeEEEEEc-CCCEEEE-EECCCeEEEEEcCCCCCCCCCCCceeEEEcCCC------CCe
Q 001366 941 YDLR-NARA-PWCVLAG-HEKAVSYVKFL-DSGTLVT-ASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHT------NEK 1009 (1092)
Q Consensus 941 wDlr-~~~~-~~~~l~~-H~~~V~~v~fs-~~~~L~S-gs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~------~~V 1009 (1092)
||+. +++. ....+.. ....+..++|+ +++++++ +..++.|.+|++..... ....+..+.... ..+
T Consensus 167 ~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~ 242 (347)
T 3hfq_A 167 YNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTG----AFTQLGIVKTIPADYTAHNGA 242 (347)
T ss_dssp EEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTT----EEEEEEEEESSCTTCCSCCEE
T ss_pred EEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCC----ceEEeeeeeecCCCCCCCCcc
Confidence 9998 3321 1111222 23467889999 5565554 55788999999873110 011223333322 347
Q ss_pred EEEEEecCCCEE-EEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecC-CeEE
Q 001366 1010 NFVGLSTADGYI-ACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSS-GCIK 1087 (1092)
Q Consensus 1010 ~~v~~spdg~~l-asgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~D-G~V~ 1087 (1092)
..++|+|+|++| +++..++.|.+|++.....+..+. ....+...+.+++|+||+++|++++.+ +.|.
T Consensus 243 ~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~-----------~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 311 (347)
T 3hfq_A 243 AAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQ-----------QISTEGDFPRDFDLDPTEAFVVVVNQNTDNAT 311 (347)
T ss_dssp EEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEE-----------EEECSSSCCCEEEECTTSSEEEEEETTTTEEE
T ss_pred eeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeE-----------EEecCCCCcCeEEECCCCCEEEEEEcCCCcEE
Confidence 889999999977 556678999999986321111111 112234567899999999999888765 8999
Q ss_pred EEEc
Q 001366 1088 VLQM 1091 (1092)
Q Consensus 1088 vW~l 1091 (1092)
+|++
T Consensus 312 v~~~ 315 (347)
T 3hfq_A 312 LYAR 315 (347)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
No 399
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.80 E-value=2.9e-18 Score=209.90 Aligned_cols=265 Identities=10% Similarity=0.016 Sum_probs=193.1
Q ss_pred CCCEEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCCCCCcccccceeeecCC-CCeEEEEEecCCCCEEEEEEC---CCcE
Q 001366 779 ANVICSISFDRDEDHFAAAGV-SKKIKIFEFNALFNDSVDVYYPAVEMSNR-SKLSCVCWNNYIKNYLASADY---DGVV 853 (1092)
Q Consensus 779 ~~~V~sl~fspdg~~latgg~-D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~sp~~~~~LaSgs~---DgtV 853 (1092)
..+|.+++|+|||++||+++. |++++||++... .......+. ..+.+++|+|+ +++++++. +...
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g--------~~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~ 90 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG--------ETVKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQH 90 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT--------EEEECCSSCCSEECEECTTCS--EEEEEEECSTTSCCE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCC--------CcEeeecccccccccccCCCC--eEEEEeccCCCCcce
Confidence 457999999999999999887 999999997541 111222334 57899999986 67777775 5556
Q ss_pred EEEECCC---CceEEEeeccCccEEEEEEecCCCC-EEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEE
Q 001366 854 KLWDACT---GQTVSHYIEHEKRAWSVDFSQVHPT-KLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLL 929 (1092)
Q Consensus 854 ~IWD~~t---g~~i~~l~~h~~~V~sv~fsp~~~~-~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~l 929 (1092)
+||.+.. +... .+..+. .+...+|+| +++ ++++.+.++.+.+||+.+++......+.. .+++|+|||. ++
T Consensus 91 ~l~~~~~~~~g~~~-~l~~~~-~~~~~~~s~-dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~-~l 164 (582)
T 3o4h_A 91 ALFKVNTSRPGEEQ-RLEAVK-PMRILSGVD-TGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGD-LI 164 (582)
T ss_dssp EEEEEETTSTTCCE-ECTTSC-SBEEEEEEE-CSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETT-EE
T ss_pred EEEEEeccCCCccc-cccCCC-CceeeeeCC-CCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCC-EE
Confidence 6765533 3322 333222 234668888 553 33444444445599999887665555444 8899999996 77
Q ss_pred EEEECC----CeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCC--eEEEEEcCCCCCCCCCCCceeEEE
Q 001366 930 AFGSAD----YRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDN--KLKLWDLKRTSHTGPSTNACSLTF 1002 (1092)
Q Consensus 930 atgs~D----g~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg--~I~vWDl~~~~~~~~~~~~~~~~l 1002 (1092)
++++.+ +.|++||+.+++. ..+..|...+..++|+ +++.|+++..++ .|.+||+.+ +... .+
T Consensus 165 a~~~~~~~~~~~i~~~d~~~g~~--~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~--------~~~~-~~ 233 (582)
T 3o4h_A 165 AGLGFFGGGRVSLFTSNLSSGGL--RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD--------GSVE-DL 233 (582)
T ss_dssp EEEEEEETTEEEEEEEETTTCCC--EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT--------CCEE-EC
T ss_pred EEEEEcCCCCeEEEEEcCCCCCc--eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC--------CcEE-Ec
Confidence 777766 7899999987753 4678899999999999 677888888888 899999983 3334 56
Q ss_pred cCCCCCeEEEE--------EecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCC
Q 001366 1003 SGHTNEKNFVG--------LSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRS 1074 (1092)
Q Consensus 1003 ~~h~~~V~~v~--------~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~ 1074 (1092)
.+|...+..++ |+|||.++++++.|+.+++|++ ++.+. .....|.+++|+ ++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~-----------------~~~~~v~~~~~s-dg 293 (582)
T 3o4h_A 234 ELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE-----------------APQGNHGRVVLW-RG 293 (582)
T ss_dssp CCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC-----------------CCSSEEEEEEEE-TT
T ss_pred cCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec-----------------cCCCceEEEEec-CC
Confidence 67777777777 9999999999999999999998 44322 112468899999 99
Q ss_pred CEEEEEecCCe---EEEEE
Q 001366 1075 DMVVAANSSGC---IKVLQ 1090 (1092)
Q Consensus 1075 ~~Lasgs~DG~---V~vW~ 1090 (1092)
.++++++.+.. |.+|+
T Consensus 294 ~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 294 KLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp EEEEEEEETTEEEEEEEET
T ss_pred EEEEEEcCCCCCCeEEEEc
Confidence 99999888754 55554
No 400
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.80 E-value=8.3e-18 Score=189.87 Aligned_cols=261 Identities=10% Similarity=0.050 Sum_probs=183.2
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCC-EEEEEECCCcEEEEECCCCc
Q 001366 784 SISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKN-YLASADYDGVVKLWDACTGQ 862 (1092)
Q Consensus 784 sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~-~LaSgs~DgtV~IWD~~tg~ 862 (1092)
++++++++.++++++.+++|.+||..+.. ............+..++|+|+ ++ ++++++.++.|.+||+.+++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~------~~~~~~~~~~~~~~~~~~s~d-g~~~~v~~~~~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDT------VYKSCVMPDKFGPGTAMMAPD-NRTAYVLNNHYGDIYGIDLDTCK 76 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTE------EEEEEECSSCCSSCEEEECTT-SSEEEEEETTTTEEEEEETTTTE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCc------EEEEEecCCCCCCceeEECCC-CCEEEEEeCCCCcEEEEeCCCCc
Confidence 35678889999999999999999986521 011111122225789999998 55 45666678999999999998
Q ss_pred eEEEeecc------CccEEEEEEecCCCCEEEEEeCC------------CcEEEEecCCCc---eeeeEecCCceEEEEE
Q 001366 863 TVSHYIEH------EKRAWSVDFSQVHPTKLASGSDD------------CSVKLWNINEKN---SLATIKNIANVCCVQF 921 (1092)
Q Consensus 863 ~i~~l~~h------~~~V~sv~fsp~~~~~laSgs~D------------g~I~iWDl~~~~---~l~~l~~~~~V~sl~f 921 (1092)
.+..+..+ ...+.+++|+| +++.+++++.+ +.|.+||+.+++ .+..+.+...+.+++|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 155 (349)
T 1jmx_B 77 NTFHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRA 155 (349)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEE
T ss_pred EEEEEEcccccccccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeE
Confidence 88777633 23378999999 88888888865 899999999854 3445556667899999
Q ss_pred ccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCC-C-----------------------CeEEEEEcCCC--------
Q 001366 922 SAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHE-K-----------------------AVSYVKFLDSG-------- 969 (1092)
Q Consensus 922 sp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~-~-----------------------~V~~v~fs~~~-------- 969 (1092)
+|++. +++ ++ +.|++||+.+++. ...+..+. . ....++++++.
T Consensus 156 s~dg~-l~~-~~--~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 230 (349)
T 1jmx_B 156 ADDGS-LYV-AG--PDIYKMDVKTGKY-TVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATAD 230 (349)
T ss_dssp CTTSC-EEE-ES--SSEEEECTTTCCE-EEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCE
T ss_pred CCCCc-EEE-cc--CcEEEEeCCCCce-eccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccc
Confidence 99996 544 43 3499999988753 33333221 0 22334444211
Q ss_pred ----EEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEec-CCCEEEEEecCCcEEEEeCCCCCceeee
Q 001366 970 ----TLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLST-ADGYIACGSESNEVYAYHRSLPMPITSY 1044 (1092)
Q Consensus 970 ----~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~sp-dg~~lasgs~Dg~I~Iwd~~~~~~i~~~ 1044 (1092)
++.....++.+++|++ ..+...+..++|+| +|++++++ ++.|++||..+++.+..+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~ 291 (349)
T 1jmx_B 231 LLYGYLSVDLKTGKTHTQEF-----------------ADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAA 291 (349)
T ss_dssp EEEEEEEEETTTCCEEEEEE-----------------EECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEE
T ss_pred cceeEEEEeccCCcEEeccc-----------------ccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEE
Confidence 1112222334444443 23455678899999 99998888 889999999988877665
Q ss_pred eccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1045 KFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1045 ~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.. ...+.+++|+|+++.|++++.++.|++|++
T Consensus 292 ~~---------------~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~ 323 (349)
T 1jmx_B 292 NL---------------DHTYYCVAFDKKGDKLYLGGTFNDLAVFNP 323 (349)
T ss_dssp EC---------------SSCCCEEEECSSSSCEEEESBSSEEEEEET
T ss_pred cC---------------CCCccceEECCCCCEEEEecCCCeEEEEec
Confidence 42 123678999999999988889999999986
No 401
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.79 E-value=5.6e-17 Score=182.42 Aligned_cols=269 Identities=8% Similarity=0.031 Sum_probs=187.6
Q ss_pred EeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCCCCCcccccceeeecC
Q 001366 749 GAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGV-SKKIKIFEFNALFNDSVDVYYPAVEMSN 827 (1092)
Q Consensus 749 ~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~-D~~I~Iwd~~~~~~~~~~~~~~~~~~~h 827 (1092)
+...++.+.+|+....+....+. .+...+ +++|+|+|+++++++. ++.|.+||...... .......+
T Consensus 15 ~~~~~~~v~~~d~~~~~~~~~~~-----~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~------~~~~~~~~ 82 (331)
T 3u4y_A 15 VEQHLRRISFFSTDTLEILNQIT-----LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP------KVVAIQEG 82 (331)
T ss_dssp EEGGGTEEEEEETTTCCEEEEEE-----CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC------EEEEEEEC
T ss_pred EecCCCeEEEEeCcccceeeeEE-----ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce------eEEecccC
Confidence 45578899999988776655443 334556 8999999997666665 88999999875211 01122234
Q ss_pred CCCeEEEEEecCCCCEEEEEECCC---cEEEEECCCCceEEEeeccCccEEEEEEecCCCC-EEEEEeCCCc-EEEEecC
Q 001366 828 RSKLSCVCWNNYIKNYLASADYDG---VVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPT-KLASGSDDCS-VKLWNIN 902 (1092)
Q Consensus 828 ~~~V~~v~~sp~~~~~LaSgs~Dg---tV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~-~laSgs~Dg~-I~iWDl~ 902 (1092)
..+..+++|+|+ +++|+++..++ .|++||+.+++.+..+..+ ..+.+++|+| +++ +++++..++. |.+|++.
T Consensus 83 ~~~~~~~~~s~d-g~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~sp-dg~~l~~~~~~~~~~i~~~~~~ 159 (331)
T 3u4y_A 83 QSSMADVDITPD-DQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISP-NGNGLILIDRSSANTVRRFKID 159 (331)
T ss_dssp SSCCCCEEECTT-SSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECT-TSSCEEEEEETTTTEEEEEEEC
T ss_pred CCCccceEECCC-CCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECC-CCCEEEEEecCCCceEEEEEEC
Confidence 455555999998 78887555443 8999999999988887654 4568999999 665 5566667788 9999998
Q ss_pred CCcee-----eeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcc--eEEecCCCCCeEEEEEc-CCCEEEEE
Q 001366 903 EKNSL-----ATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAP--WCVLAGHEKAVSYVKFL-DSGTLVTA 974 (1092)
Q Consensus 903 ~~~~l-----~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~--~~~l~~H~~~V~~v~fs-~~~~L~Sg 974 (1092)
....+ ..+.....+.+++|+|++..+++++..++.|++||+.+++.. +..+.. ...+..++|+ ++++++.+
T Consensus 160 ~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~ 238 (331)
T 3u4y_A 160 ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVL 238 (331)
T ss_dssp TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEE
T ss_pred CCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEE
Confidence 65443 223345668999999999766677777999999999876541 344443 3567889999 55656544
Q ss_pred -ECCCeEEEEEcCCCCCCCCCCCceeEEEcCC----CC---CeEEEEEecCCCEEEEEe-cCCcEEEEeCCCCC
Q 001366 975 -STDNKLKLWDLKRTSHTGPSTNACSLTFSGH----TN---EKNFVGLSTADGYIACGS-ESNEVYAYHRSLPM 1039 (1092)
Q Consensus 975 -s~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h----~~---~V~~v~~spdg~~lasgs-~Dg~I~Iwd~~~~~ 1039 (1092)
..++.|.+||+.+... ..+..+..+ .. ..+.++|+|+|++|++++ .++.|.||++....
T Consensus 239 ~~~~~~i~~~d~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 239 TESTVDVFNFNQLSGTL------SFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp CSSEEEEEEEETTTTEE------EEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred EcCCCEEEEEECCCCce------eeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 4578899999984321 112222222 11 224589999999876555 56799999987644
No 402
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.77 E-value=1.9e-16 Score=179.12 Aligned_cols=236 Identities=11% Similarity=0.036 Sum_probs=182.2
Q ss_pred CCCeEEEEEecCCCCEEEEEEC-------CCcEEEEECCCCceEEEeeccCccEEEEEEecCCCC-EEEEEeCCCcEEEE
Q 001366 828 RSKLSCVCWNNYIKNYLASADY-------DGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPT-KLASGSDDCSVKLW 899 (1092)
Q Consensus 828 ~~~V~~v~~sp~~~~~LaSgs~-------DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~-~laSgs~Dg~I~iW 899 (1092)
...+..++|+|+ ++.+++++. ++.|.+||..+++.+..+.. ...+.+++|+| +++ +++++..++.|.+|
T Consensus 40 ~~~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 40 GKGAYEMAYSQQ-ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINN-TTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp ESSEEEEEEETT-TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEET-TTTEEEEEETTTTEEEEE
T ss_pred ccCccceEECCC-CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECC-CCCEEEEEecCCCEEEEE
Confidence 356789999998 666666664 56899999999998888764 34578999999 776 55666678999999
Q ss_pred ecCCCceeeeEecCC----------ceEEEEEccCCCeEEEEE-ECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-C
Q 001366 900 NINEKNSLATIKNIA----------NVCCVQFSAHSSHLLAFG-SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-D 967 (1092)
Q Consensus 900 Dl~~~~~l~~l~~~~----------~V~sl~fsp~~~~~latg-s~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~ 967 (1092)
|+.+++.+..+.... .+.+++|+|++..+++++ +.++.|++||+.+.+. ...+..+...+..++|+ +
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL-KTAIQNTGKMSTGLALDSE 195 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE-EEEECCCCTTCCCCEEETT
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce-EEEecCCCCccceEEECCC
Confidence 999999888887432 278999999997555554 3588999999987753 45555466668889998 6
Q ss_pred CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcC----CCCCeEEEEEecCCCEEEEEe-cCCcEEEEeCCCCCcee
Q 001366 968 SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG----HTNEKNFVGLSTADGYIACGS-ESNEVYAYHRSLPMPIT 1042 (1092)
Q Consensus 968 ~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~----h~~~V~~v~~spdg~~lasgs-~Dg~I~Iwd~~~~~~i~ 1042 (1092)
+++|++++.++.|.+||+.+ +.....+.. +...+..++|+|+|++++.++ .++.|++||..+++.+.
T Consensus 196 g~~l~~~~~~~~i~~~d~~~--------~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 196 GKRLYTTNADGELITIDTAD--------NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILA 267 (353)
T ss_dssp TTEEEEECTTSEEEEEETTT--------TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCeEEEEECCC--------CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 77899999999999999983 344444443 556688899999999776665 45999999999988877
Q ss_pred eeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEe-cCCeEEEEEc
Q 001366 1043 SYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAAN-SSGCIKVLQM 1091 (1092)
Q Consensus 1043 ~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs-~DG~V~vW~l 1091 (1092)
.+..+ . ...++|+|+++.|++++ .++.|.+|++
T Consensus 268 ~~~~~---------------~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 268 KVAAP---------------E-SLAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp EEECS---------------S-CCCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEcC---------------C-CceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 76531 1 14589999999666555 6899999985
No 403
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.77 E-value=1.1e-16 Score=181.77 Aligned_cols=251 Identities=8% Similarity=0.069 Sum_probs=171.9
Q ss_pred CCCEEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEE-CCCcEEE
Q 001366 779 ANVICSISFDRDEDHFAAAGV--SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASAD-YDGVVKL 855 (1092)
Q Consensus 779 ~~~V~sl~fspdg~~latgg~--D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs-~DgtV~I 855 (1092)
...+..++|+|+|++++++.. ++.|.+|++.... .........+...+.+++|+|+ +++|++++ .+++|++
T Consensus 39 ~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~-----~~~~~~~~~~~~~p~~~a~spd-g~~l~~~~~~~~~v~v 112 (347)
T 3hfq_A 39 TQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQT-----AHKLNTVVAPGTPPAYVAVDEA-RQLVYSANYHKGTAEV 112 (347)
T ss_dssp CSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTE-----EEEEEEEEEESCCCSEEEEETT-TTEEEEEETTTTEEEE
T ss_pred cCCcceEEEccCCeEEEEEecCCCceEEEEEecCCc-----EEEeeeeecCCCCCEEEEECCC-CCEEEEEeCCCCEEEE
Confidence 345667999999994444432 6899999985411 1111122335677889999998 78777777 6799999
Q ss_pred EECCC-Cc--eEEEeec---------cCccEEEEEEecCCCCEEEEEeCCCcEEEEecC-CCceee--eEe--cCCceEE
Q 001366 856 WDACT-GQ--TVSHYIE---------HEKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN-EKNSLA--TIK--NIANVCC 918 (1092)
Q Consensus 856 WD~~t-g~--~i~~l~~---------h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~-~~~~l~--~l~--~~~~V~s 918 (1092)
||+.. +. .+..+.. +...+.+++|+| ++++++++..++.|.+||+. +++... .+. ....+..
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~ 191 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRH 191 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEE
T ss_pred EEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCce
Confidence 99963 32 3333321 123488999999 77777777778999999998 454322 222 2346888
Q ss_pred EEEccCCCeEEEEEECCCeEEEEEcCC--CCc-ceEEecCCC------CCeEEEEEc-CCCEE-EEEECCCeEEEEEcCC
Q 001366 919 VQFSAHSSHLLAFGSADYRTYCYDLRN--ARA-PWCVLAGHE------KAVSYVKFL-DSGTL-VTASTDNKLKLWDLKR 987 (1092)
Q Consensus 919 l~fsp~~~~~latgs~Dg~I~vwDlr~--~~~-~~~~l~~H~------~~V~~v~fs-~~~~L-~Sgs~Dg~I~vWDl~~ 987 (1092)
++|+|+|..+++++..++.|.+||+.. ++. .+..+.... ..+..++|+ ++++| ++...++.|.+||+..
T Consensus 192 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 192 LVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 999999975666677889999999874 221 112222222 458889999 55666 5666799999999972
Q ss_pred CCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEec-CCcEEEEe--CCCCCce
Q 001366 988 TSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSE-SNEVYAYH--RSLPMPI 1041 (1092)
Q Consensus 988 ~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~-Dg~I~Iwd--~~~~~~i 1041 (1092)
.. ....+..+..+...+..++|+|+|++|++++. ++.|.+|+ ..+++..
T Consensus 272 ~g-----~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 272 DG-----HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp GG-----CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CC-----cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 11 12345566666667889999999998888775 58999994 4455544
No 404
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.76 E-value=1e-16 Score=200.61 Aligned_cols=278 Identities=14% Similarity=0.027 Sum_probs=196.0
Q ss_pred cCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCC-----CCCCCc
Q 001366 742 QNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNA-----LFNDSV 816 (1092)
Q Consensus 742 ~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~-----~~~~~~ 816 (1092)
++|+..+....++.+.+|+....+... +..+...+.+++|+|||++||++ .|+.|++|++.+ ......
T Consensus 89 ~spd~~~~~~~~~~i~~~d~~~~~~~~------l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~ 161 (706)
T 2z3z_A 89 DAGRGLVVLFTQGGLVGFDMLARKVTY------LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAV 161 (706)
T ss_dssp ETTTTEEEEEETTEEEEEETTTTEEEE------EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEES
T ss_pred ECCCCeEEEEECCEEEEEECCCCceEE------ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEe
Confidence 466666666788999999987655432 23456678889999999999995 689999999875 221100
Q ss_pred c-ccccee------eecCCCCeEEEEEecCCCCEEEEEE---------------------------------CCCcEEEE
Q 001366 817 D-VYYPAV------EMSNRSKLSCVCWNNYIKNYLASAD---------------------------------YDGVVKLW 856 (1092)
Q Consensus 817 ~-~~~~~~------~~~h~~~V~~v~~sp~~~~~LaSgs---------------------------------~DgtV~IW 856 (1092)
. ...... ...+...+.+++|+|+ +++|++++ .+..|++|
T Consensus 162 ~~~~~~~~~~g~~~~~ee~~~~~~~~~SpD-g~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~ 240 (706)
T 2z3z_A 162 TIDGTETLVYGQAVHQREFGIEKGTFWSPK-GSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIY 240 (706)
T ss_dssp CSCCBTTEEESSCCGGGCTTCCCSEEECTT-SSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEE
T ss_pred ccCCCCCeEcccchhhhhcCCCceEEECCC-CCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEE
Confidence 0 000000 0001122589999998 88898887 44789999
Q ss_pred ECCCCceEEEee--ccCccEEEEEEecCCCCEEEEEeCCC-----cEEEEecCCCceeeeEe---cCC---ceEEEEEcc
Q 001366 857 DACTGQTVSHYI--EHEKRAWSVDFSQVHPTKLASGSDDC-----SVKLWNINEKNSLATIK---NIA---NVCCVQFSA 923 (1092)
Q Consensus 857 D~~tg~~i~~l~--~h~~~V~sv~fsp~~~~~laSgs~Dg-----~I~iWDl~~~~~l~~l~---~~~---~V~sl~fsp 923 (1092)
|+.+++...... .|...+.+++|+| +++.|++++.|+ .|.+||+.+++....+. ... .+.+++|+|
T Consensus 241 d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp 319 (706)
T 2z3z_A 241 HLATGKTVYLQTGEPKEKFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLP 319 (706)
T ss_dssp ETTTTEEEECCCCSCTTCEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECT
T ss_pred ECCCCceEeeccCCCCceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeec
Confidence 999887654442 4667899999999 899899888776 89999999984444332 222 246789999
Q ss_pred --CCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEE-EEEc-CCCEEEEEEC-CC----eEEEEEcCCCCCCCCC
Q 001366 924 --HSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSY-VKFL-DSGTLVTAST-DN----KLKLWDLKRTSHTGPS 994 (1092)
Q Consensus 924 --~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~-v~fs-~~~~L~Sgs~-Dg----~I~vWDl~~~~~~~~~ 994 (1092)
+|. ++++++.|+.+++|++......+..+..|...+.. ++|+ +++.|+.++. ++ .|..||+.+.
T Consensus 320 ~~dg~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~------ 392 (706)
T 2z3z_A 320 GSNNQ-FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG------ 392 (706)
T ss_dssp TCSSE-EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC------
T ss_pred CCCCE-EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC------
Confidence 885 88889999999999876333345677778777877 7998 5566665554 44 5666666532
Q ss_pred CCceeEEEcCCCCCeEEEEEecCCCEEEEEecC----CcEEEEeCCCCC
Q 001366 995 TNACSLTFSGHTNEKNFVGLSTADGYIACGSES----NEVYAYHRSLPM 1039 (1092)
Q Consensus 995 ~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~D----g~I~Iwd~~~~~ 1039 (1092)
. ...+ .|...+.+++|||+|++|+.++.+ +.|++||...++
T Consensus 393 --~-~~~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 393 --K-TKDL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp --C-CEES-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred --C-ceec-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 1 2233 266778999999999988776543 569999998776
No 405
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.76 E-value=4.9e-16 Score=177.67 Aligned_cols=271 Identities=11% Similarity=0.101 Sum_probs=180.9
Q ss_pred CCEEEEEe----CCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECC----CcEEEEECCC--
Q 001366 791 EDHFAAAG----VSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYD----GVVKLWDACT-- 860 (1092)
Q Consensus 791 g~~latgg----~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~D----gtV~IWD~~t-- 860 (1092)
..++.+|+ .++.|.+|+++..... ....... +...+..++|+|+ +++|++++.+ +.|.+|++..
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~----~~~~~~~-~~~~p~~l~~spd-g~~l~~~~~~~~~~~~v~~~~~~~~~ 86 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGE----SLPLSDA-EVANPSYLIPSAD-GKFVYSVNEFSKDQAAVSAFAFDKEK 86 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCC----EEEEEEE-ECSCCCSEEECTT-SSEEEEEECCSSTTCEEEEEEEETTT
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCC----EEEeecc-cCCCCceEEECCC-CCEEEEEEccCCCCCcEEEEEEeCCC
Confidence 33555554 4578999988642111 1111122 5677788999998 8888888876 8999998865
Q ss_pred Cc--eEEEeeccCccEEEEEEecCCCCEEEEEe-CCCcEEEEecCCCceeeeE----ec-----------CCceEEEEEc
Q 001366 861 GQ--TVSHYIEHEKRAWSVDFSQVHPTKLASGS-DDCSVKLWNINEKNSLATI----KN-----------IANVCCVQFS 922 (1092)
Q Consensus 861 g~--~i~~l~~h~~~V~sv~fsp~~~~~laSgs-~Dg~I~iWDl~~~~~l~~l----~~-----------~~~V~sl~fs 922 (1092)
++ .+.....+...+..+++ +++.|++++ .+++|.+|++.....+..+ .+ ...+.+++|+
T Consensus 87 g~~~~~~~~~~~~~~p~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~s 163 (361)
T 3scy_A 87 GTLHLLNTQKTMGADPCYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRIT 163 (361)
T ss_dssp TEEEEEEEEECSSSCEEEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEEC
T ss_pred CcEEEeeEeccCCCCcEEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEEC
Confidence 43 33344445556777777 456666555 6889999999765433221 11 1235889999
Q ss_pred cCCCeEEEEEECCCeEEEEEcCCCCc------c------eEEecCCCCCeEEEEEc-CCCEEEEEE-CCCeEEEEEcCCC
Q 001366 923 AHSSHLLAFGSADYRTYCYDLRNARA------P------WCVLAGHEKAVSYVKFL-DSGTLVTAS-TDNKLKLWDLKRT 988 (1092)
Q Consensus 923 p~~~~~latgs~Dg~I~vwDlr~~~~------~------~~~l~~H~~~V~~v~fs-~~~~L~Sgs-~Dg~I~vWDl~~~ 988 (1092)
|++..+++++..++.|++|++..... . ......+...+..++|+ +++++++++ .++.|.+||+.++
T Consensus 164 pdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g 243 (361)
T 3scy_A 164 PDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG 243 (361)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETT
T ss_pred CCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC
Confidence 99975666666689999999875432 1 12223445668899999 556677666 6899999999732
Q ss_pred CCCCCCCCceeEEE---cCCCCCeEEEEEecCCCEEEEEec--CCcEEEEeCC--CCCc--eeeeeccccCCCCCccccC
Q 001366 989 SHTGPSTNACSLTF---SGHTNEKNFVGLSTADGYIACGSE--SNEVYAYHRS--LPMP--ITSYKFGSIDPISGKETDD 1059 (1092)
Q Consensus 989 ~~~~~~~~~~~~~l---~~h~~~V~~v~~spdg~~lasgs~--Dg~I~Iwd~~--~~~~--i~~~~~~~~~~i~~~~~~~ 1059 (1092)
. ...+..+ ..+......++|+|||++|+++.. ++.|.+|++. .+.. +..+.
T Consensus 244 ~------~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~-------------- 303 (361)
T 3scy_A 244 M------LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL-------------- 303 (361)
T ss_dssp E------EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE--------------
T ss_pred c------eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec--------------
Confidence 1 1112222 233455789999999998866654 5899999985 3332 22211
Q ss_pred CCCCCEEEEEEeCCCCEEEEEe-cCCeEEEEEc
Q 001366 1060 DNGLFVSSVCWRRRSDMVVAAN-SSGCIKVLQM 1091 (1092)
Q Consensus 1060 ~h~~~V~sva~spd~~~Lasgs-~DG~V~vW~l 1091 (1092)
. +..+.+++|+|++++|++++ .++.|.+|++
T Consensus 304 ~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 304 T-GIHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp C-SSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred C-CCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 1 34577899999999998888 6799999864
No 406
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.75 E-value=2e-17 Score=195.54 Aligned_cols=215 Identities=13% Similarity=0.112 Sum_probs=160.6
Q ss_pred CcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCC----------------ceeeeEecCC
Q 001366 851 GVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEK----------------NSLATIKNIA 914 (1092)
Q Consensus 851 gtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~----------------~~l~~l~~~~ 914 (1092)
+.|++|+.... .....+..+++++ +..++++++.|+ +++|+.... .....+.+..
T Consensus 23 ~~vri~~~~~~-------~~~~~~n~lavs~-~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (434)
T 2oit_A 23 KKVRIFDSPEE-------LPKERSSLLAVSN-KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKF 93 (434)
T ss_dssp CEEECSCCCSS-------CCCSCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSS
T ss_pred eeEEecCCccc-------cCCCCccEEEEec-CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCC
Confidence 57888875321 1334578899999 778899999888 899876421 0112334566
Q ss_pred ceEEEEEccCCCeEEE----EEECCCeEEEEEcCCC-----Cc--c---eEEecCCCCCeEEEEEcC--CCEEEEEECCC
Q 001366 915 NVCCVQFSAHSSHLLA----FGSADYRTYCYDLRNA-----RA--P---WCVLAGHEKAVSYVKFLD--SGTLVTASTDN 978 (1092)
Q Consensus 915 ~V~sl~fsp~~~~~la----tgs~Dg~I~vwDlr~~-----~~--~---~~~l~~H~~~V~~v~fs~--~~~L~Sgs~Dg 978 (1092)
.|.+++|+|++. +|+ +|+.|+.|++||+++. +. + +..+.+|...|.+++|++ +..|++++.||
T Consensus 94 ~v~~l~~spdg~-~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 94 PIHHLALSCDNL-TLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp CEEEEEECTTSC-EEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred cccEEEEcCCCC-EEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC
Confidence 799999999996 666 7888999999998754 11 1 345678999999999994 57899999999
Q ss_pred eEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCcccc
Q 001366 979 KLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETD 1058 (1092)
Q Consensus 979 ~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~ 1058 (1092)
+|++||+++ +.......+|...|++++|+|+|.+|++|+.||.|++||.. ++....+... ....
T Consensus 173 ~v~iwD~~~--------~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~-------~~~~ 236 (434)
T 2oit_A 173 SIAVLQVTE--------TVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCP-------PFYE 236 (434)
T ss_dssp CEEEEEESS--------SEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCC-------TTCC
T ss_pred eEEEEEcCC--------CcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCC-------cccC
Confidence 999999983 34455666789999999999999999999999999999987 5544443210 0111
Q ss_pred CCCCCCEEEEEEeCCCCEEEE-EecCCe------EEEEEc
Q 001366 1059 DDNGLFVSSVCWRRRSDMVVA-ANSSGC------IKVLQM 1091 (1092)
Q Consensus 1059 ~~h~~~V~sva~spd~~~Las-gs~DG~------V~vW~l 1091 (1092)
.+|...|.+++|++++.++++ ++.||. +++|++
T Consensus 237 ~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l 276 (434)
T 2oit_A 237 SDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALL 276 (434)
T ss_dssp TTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEEC
T ss_pred CCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEe
Confidence 245568999999999988865 344543 889986
No 407
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.74 E-value=3.4e-17 Score=200.34 Aligned_cols=232 Identities=10% Similarity=-0.014 Sum_probs=171.4
Q ss_pred CCCeEEEEEecCCCCEEEEEEC-CCcEEEEECCCCceEEEeeccC-ccEEEEEEecCCCCEEEEEeC---CCcEEEEecC
Q 001366 828 RSKLSCVCWNNYIKNYLASADY-DGVVKLWDACTGQTVSHYIEHE-KRAWSVDFSQVHPTKLASGSD---DCSVKLWNIN 902 (1092)
Q Consensus 828 ~~~V~~v~~sp~~~~~LaSgs~-DgtV~IWD~~tg~~i~~l~~h~-~~V~sv~fsp~~~~~laSgs~---Dg~I~iWDl~ 902 (1092)
..+|.+++|+|| ++.||+++. ||+++||++.+++. ..+..|. ..+.+++|+| + .++++++. +...++|.+.
T Consensus 21 ~~~~~~~~~~~D-G~~la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~sp-d-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 21 AVEKYSLQGVVD-GDKLLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGV-G-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HSCEEEEEEEET-TTEEEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTC-S-EEEEEEECSTTSCCEEEEEEE
T ss_pred ccchheeecCCC-CCeEEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCC-C-eEEEEeccCCCCcceEEEEEe
Confidence 457999999998 888888877 99999999966554 4555555 6899999999 6 77777775 5566776654
Q ss_pred C--CceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECC--
Q 001366 903 E--KNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTD-- 977 (1092)
Q Consensus 903 ~--~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~D-- 977 (1092)
. ......+.....+...+|+|++..++++++.++.+.+||+.+++. ..+..+.. .+++|+ ++++|++++.|
T Consensus 97 ~~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~--~~l~~~~~--~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 97 TSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL--RELARLPG--FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp TTSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE--EEEEEESS--CEEEEEEETTEEEEEEEEET
T ss_pred ccCCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE--EEeecCCC--ceEEECCCCCEEEEEEEcCC
Confidence 3 222224444444557788998866555555555666999987653 22323333 788898 78888888877
Q ss_pred --CeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCC--cEEEEeCCCCCceeeeeccccCCCC
Q 001366 978 --NKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESN--EVYAYHRSLPMPITSYKFGSIDPIS 1053 (1092)
Q Consensus 978 --g~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg--~I~Iwd~~~~~~i~~~~~~~~~~i~ 1053 (1092)
+.|.+||+.++ . ...+..|...+..++|||||++|++++.++ .|++||..+++.. ..
T Consensus 173 ~~~~i~~~d~~~g--------~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~--------- 233 (582)
T 3o4h_A 173 GRVSLFTSNLSSG--------G-LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DL--------- 233 (582)
T ss_dssp TEEEEEEEETTTC--------C-CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-EC---------
T ss_pred CCeEEEEEcCCCC--------C-ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ec---------
Confidence 78999998742 2 346778888899999999999999888888 8999999887755 22
Q ss_pred CccccCCCCCCEEEEE--------EeCCCCEEEEEecCCeEEEEEc
Q 001366 1054 GKETDDDNGLFVSSVC--------WRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1054 ~~~~~~~h~~~V~sva--------~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.+|...|.+++ |+|||.++++++.||.++||++
T Consensus 234 -----~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 234 -----ELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp -----CCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred -----cCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 12233344444 9999999999999999999985
No 408
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.74 E-value=1.5e-15 Score=173.57 Aligned_cols=289 Identities=8% Similarity=0.025 Sum_probs=182.6
Q ss_pred CCeEEEEEcc--cceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCC----CcEEEEEcCCCCCCCcccccceeeec
Q 001366 753 DGLCKYARYS--KFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS----KKIKIFEFNALFNDSVDVYYPAVEMS 826 (1092)
Q Consensus 753 D~~~k~w~~~--~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D----~~I~Iwd~~~~~~~~~~~~~~~~~~~ 826 (1092)
++.+.+|.+. ..+..... .+ +...+..++|+|+|++|++++.+ +.|.+|+++.... ..........
T Consensus 26 ~~~i~~~~~d~~~g~~~~~~---~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g---~~~~~~~~~~ 97 (361)
T 3scy_A 26 SKGIYTFRFNEETGESLPLS---DA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKG---TLHLLNTQKT 97 (361)
T ss_dssp CCEEEEEEEETTTCCEEEEE---EE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTT---EEEEEEEEEC
T ss_pred CCCEEEEEEeCCCCCEEEee---cc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCC---cEEEeeEecc
Confidence 4567777763 22222111 12 45666779999999999999876 7999999865210 1111111222
Q ss_pred CCCCeEEEEEecCCCCEEEEEE-CCCcEEEEECCCCceEEE------eec--------cCccEEEEEEecCCCCEEE-EE
Q 001366 827 NRSKLSCVCWNNYIKNYLASAD-YDGVVKLWDACTGQTVSH------YIE--------HEKRAWSVDFSQVHPTKLA-SG 890 (1092)
Q Consensus 827 h~~~V~~v~~sp~~~~~LaSgs-~DgtV~IWD~~tg~~i~~------l~~--------h~~~V~sv~fsp~~~~~la-Sg 890 (1092)
+......+++ + +++|++++ .+++|.+|++.+...+.. ..+ +...+.+++|+| +++.++ ++
T Consensus 98 ~~~~p~~~~~--d-g~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~ 173 (361)
T 3scy_A 98 MGADPCYLTT--N-GKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADD 173 (361)
T ss_dssp SSSCEEEEEE--C-SSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEE
T ss_pred CCCCcEEEEE--C-CCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEe
Confidence 4456677777 4 66666666 578999999975432211 111 123358899999 887554 44
Q ss_pred eCCCcEEEEecCCCce------e--------eeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCc-ceEE---
Q 001366 891 SDDCSVKLWNINEKNS------L--------ATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA-PWCV--- 952 (1092)
Q Consensus 891 s~Dg~I~iWDl~~~~~------l--------~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~-~~~~--- 952 (1092)
..++.|.+|++..... + ..+.....+..++|+|++..+++++..++.|.+||+.++.. .+..
T Consensus 174 ~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~ 253 (361)
T 3scy_A 174 LGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAA 253 (361)
T ss_dssp TTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEES
T ss_pred CCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEec
Confidence 4589999999875442 2 12224566889999999974444444799999999986532 1122
Q ss_pred ecCCCCCeEEEEEc-CCCEEEEEEC--CCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEe-cCC
Q 001366 953 LAGHEKAVSYVKFL-DSGTLVTAST--DNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGS-ESN 1028 (1092)
Q Consensus 953 l~~H~~~V~~v~fs-~~~~L~Sgs~--Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs-~Dg 1028 (1092)
...+...+..++|+ ++++|+++.. ++.|.+|++..... ....+..+.. ...+..++|+|+|++|++++ .++
T Consensus 254 ~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g----~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~ 328 (361)
T 3scy_A 254 DTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNG----TLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTN 328 (361)
T ss_dssp CSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTC----CEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTT
T ss_pred CCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCC----cEEEeeEecC-CCCCceEEECCCCCEEEEEECCCC
Confidence 23344567899999 6667766665 48999999962110 1123344443 45678999999999888887 678
Q ss_pred cEEEEeCC--CCCceeeeeccccCCCCCccccCCCCCCEEEEEEe
Q 001366 1029 EVYAYHRS--LPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWR 1071 (1092)
Q Consensus 1029 ~I~Iwd~~--~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~s 1071 (1092)
.|.+|.+. +++...... ..+...+.+|+|.
T Consensus 329 ~v~v~~~d~~~g~~~~~~~-------------~~~~~~p~~v~~~ 360 (361)
T 3scy_A 329 VIQIFERDQATGLLTDIKK-------------DIKVDKPVCLKFV 360 (361)
T ss_dssp EEEEEEECTTTCCEEECSC-------------CEECSSEEEEEEE
T ss_pred CEEEEEEECCCCcEeecce-------------eeeCCCCeEEEEc
Confidence 99997544 444332211 1123458888886
No 409
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.71 E-value=3.3e-16 Score=196.45 Aligned_cols=315 Identities=7% Similarity=-0.030 Sum_probs=205.5
Q ss_pred cCCCCcEE-eEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeC---------CCcEEEEEcCCC
Q 001366 742 QNPTDRLG-AFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGV---------SKKIKIFEFNAL 811 (1092)
Q Consensus 742 ~~~~~~l~-~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~---------D~~I~Iwd~~~~ 811 (1092)
+.|++.+. ...|+.+++|+....+....+...... ...|.+++|+|||++||+++. ++.|++||+.+.
T Consensus 23 ~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g 100 (719)
T 1z68_A 23 WISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMK--SVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG 100 (719)
T ss_dssp ESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHH--TTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT
T ss_pred ECCCCeEEEEcCCCCEEEEEcCCCcEEEEEcccccc--ccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC
Confidence 55655443 336889999998877665444321110 124789999999999999886 789999998752
Q ss_pred CCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEe-eccCccE----------------
Q 001366 812 FNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHY-IEHEKRA---------------- 874 (1092)
Q Consensus 812 ~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l-~~h~~~V---------------- 874 (1092)
... . ... ....+.+++|+|+ ++.||+++ |+.|++||+.+++..... .++...|
T Consensus 101 ~~~--~-~~~-----l~~~~~~~~~SPD-G~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~ 170 (719)
T 1z68_A 101 EFV--R-GNE-----LPRPIQYLCWSPV-GSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLAT 170 (719)
T ss_dssp EEC--C-SSC-----CCSSBCCEEECSS-TTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCS
T ss_pred ccc--c-cee-----cCcccccceECCC-CCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccC
Confidence 210 0 000 1256889999998 88888875 789999999888765432 2333322
Q ss_pred -EEEEEecCCCCEEEEEeCCC----------------------------------cEEEEecCCCcee--eeE-------
Q 001366 875 -WSVDFSQVHPTKLASGSDDC----------------------------------SVKLWNINEKNSL--ATI------- 910 (1092)
Q Consensus 875 -~sv~fsp~~~~~laSgs~Dg----------------------------------~I~iWDl~~~~~l--~~l------- 910 (1092)
.+++|+| |++.|++++.|. .|++||+.+++.. ..+
T Consensus 171 ~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 249 (719)
T 1z68_A 171 KYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIA 249 (719)
T ss_dssp SCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHH
T ss_pred cccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCC
Confidence 4899999 999999988663 7889999987753 111
Q ss_pred ecCCceEEEEEccCCCeEEEEEECC----CeEEEEE----cCCCCcceEEe----cCCCCCeE-----EEEEc-CCCEEE
Q 001366 911 KNIANVCCVQFSAHSSHLLAFGSAD----YRTYCYD----LRNARAPWCVL----AGHEKAVS-----YVKFL-DSGTLV 972 (1092)
Q Consensus 911 ~~~~~V~sl~fsp~~~~~latgs~D----g~I~vwD----lr~~~~~~~~l----~~H~~~V~-----~v~fs-~~~~L~ 972 (1092)
.+...+.+++|+|++ .++++.... ..|++|| +.+++.. ..+ .+|...+. .+.|+ +++.|+
T Consensus 250 ~~~~~~~~~~~SpD~-~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 327 (719)
T 1z68_A 250 SSDYYFSWLTWVTDE-RVCLQWLKRVQNVSVLSICDFREDWQTWDCP-KTQEHIEESRTGWAGGFFVSTPVFSYDAISYY 327 (719)
T ss_dssp TSCEEEEEEEESSSS-EEEEEEEESSTTEEEEEEEEECSSSSSEECC-GGGEEEEECSSSCSSSSSCCCCEECTTSSCEE
T ss_pred CCcceEEEeEEeCCC-eEEEEEeccccCeEEEEEEcccCCCCCCceE-EEEecccccCCceEccccCCccEECCCCCeEE
Confidence 144568999999996 566664432 3588999 7665432 222 46777776 78998 555443
Q ss_pred --EEECCC--eEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecC-----CcEEEEeCCC--CCc-
Q 001366 973 --TASTDN--KLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSES-----NEVYAYHRSL--PMP- 1040 (1092)
Q Consensus 973 --Sgs~Dg--~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~D-----g~I~Iwd~~~--~~~- 1040 (1092)
++..+| .|.+||+.. +. ...+..+...+..+.++ +++.|+..+.+ +.+++|.+.. +..
T Consensus 328 ~~~~~~~g~~~l~~~~~~~--------~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~ 397 (719)
T 1z68_A 328 KIFSDKDGYKHIHYIKDTV--------EN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPS 397 (719)
T ss_dssp EEEECTTSCEEEEEESSCS--------TT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCC
T ss_pred EEEEccCCceEEEEEECCC--------Cc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCC
Confidence 344566 466666652 12 34555666668888777 88877766654 7888987653 211
Q ss_pred eeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEE-EecC--CeEEEEEc
Q 001366 1041 ITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVA-ANSS--GCIKVLQM 1091 (1092)
Q Consensus 1041 i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Las-gs~D--G~V~vW~l 1091 (1092)
...+. ....+|...+..+.|+|+++.|+. ++.. ..+.+|++
T Consensus 398 ~~~l~----------~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~ 441 (719)
T 1z68_A 398 KKCVT----------CHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDG 441 (719)
T ss_dssp EEESS----------TTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECS
T ss_pred ceecc----------CccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEEC
Confidence 11110 011235567889999999987774 3333 45667754
No 410
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=9.3e-16 Score=176.49 Aligned_cols=295 Identities=10% Similarity=0.033 Sum_probs=188.1
Q ss_pred ecCCCCCEEE-----EEEcCCCCEEEEEeC-CCc--EEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEE
Q 001366 775 FNNSANVICS-----ISFDRDEDHFAAAGV-SKK--IKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLAS 846 (1092)
Q Consensus 775 l~~h~~~V~s-----l~fspdg~~latgg~-D~~--I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaS 846 (1092)
+..|...+.. .+|+|||++||.++. ++. |.+||+.+.. .......+...+.++.|+|+ ++.|+.
T Consensus 26 lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~-------~~~lt~~~~~~~~~~~~spd-g~~l~~ 97 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV-------ATQLTEGRGDNTFGGFLSPD-DDALFY 97 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCE-------EEECCCSSCBCSSSCEECTT-SSEEEE
T ss_pred ecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCc-------eEEeeeCCCCCccceEEcCC-CCEEEE
Confidence 4455555555 789999999999987 664 6677765411 11112233444456789998 889999
Q ss_pred EECCCcEEEEECCCCceEEEeeccCccEEEEEE--ecCCCCEEEEE----------------------eCCCcEEEEecC
Q 001366 847 ADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDF--SQVHPTKLASG----------------------SDDCSVKLWNIN 902 (1092)
Q Consensus 847 gs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~f--sp~~~~~laSg----------------------s~Dg~I~iWDl~ 902 (1092)
++.++.|++||+.+++....+..+...+....| +| ++..++.. +.+..|.+||+.
T Consensus 98 ~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 176 (388)
T 3pe7_A 98 VKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK 176 (388)
T ss_dssp EETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT
T ss_pred EeCCCeEEEEECCCCcceeeeechhhcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECC
Confidence 999999999999999877777666665544444 67 77777642 245789999999
Q ss_pred CCceeeeEecCCceEEEEEcc-CCCeEEEEEECC------CeEEEEEcCCCCcceEEecCCC--CCeEEEEEc-CCCEEE
Q 001366 903 EKNSLATIKNIANVCCVQFSA-HSSHLLAFGSAD------YRTYCYDLRNARAPWCVLAGHE--KAVSYVKFL-DSGTLV 972 (1092)
Q Consensus 903 ~~~~l~~l~~~~~V~sl~fsp-~~~~~latgs~D------g~I~vwDlr~~~~~~~~l~~H~--~~V~~v~fs-~~~~L~ 972 (1092)
+++......+...+..++|+| ++. .|+....+ ..|+++|+.... ...+..+. ..+..+.|+ +++.|+
T Consensus 177 ~g~~~~l~~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~ 253 (388)
T 3pe7_A 177 TGESTVILQENQWLGHPIYRPYDDS-TVAFCHEGPHDLVDARMWLINEDGTN--MRKVKTHAEGESCTHEFWVPDGSALV 253 (388)
T ss_dssp TCCEEEEEEESSCEEEEEEETTEEE-EEEEEECSCTTTSSCSEEEEETTSCC--CEESCCCCTTEEEEEEEECTTSSCEE
T ss_pred CCceEEeecCCccccccEECCCCCC-EEEEEEecCCCCCcceEEEEeCCCCc--eEEeeeCCCCcccccceECCCCCEEE
Confidence 987766666777899999999 885 66655543 378888876543 23444444 257788999 556565
Q ss_pred EEEC-CC----eEEEEEcCCCCCCCCCCCceeEEEcCCCCC---eEEEEEecCCCEEEEE---------ecCCcEEEEeC
Q 001366 973 TAST-DN----KLKLWDLKRTSHTGPSTNACSLTFSGHTNE---KNFVGLSTADGYIACG---------SESNEVYAYHR 1035 (1092)
Q Consensus 973 Sgs~-Dg----~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~---V~~v~~spdg~~lasg---------s~Dg~I~Iwd~ 1035 (1092)
..+. ++ .|.+||+.++.. ..+..+.++... ...+.|+|||+.|+.. ..+..|++||.
T Consensus 254 ~~~~~~~~~~~~l~~~d~~~g~~------~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~ 327 (388)
T 3pe7_A 254 YVSYLKGSPDRFIYSADPETLEN------RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNM 327 (388)
T ss_dssp EEEEETTCCCEEEEEECTTTCCE------EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEET
T ss_pred EEecCCCCCcceEEEEecCCCce------EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEec
Confidence 4432 22 399999985321 123333321100 1123799999987754 45678999999
Q ss_pred CCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEe-cCCeEEEEEc
Q 001366 1036 SLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAAN-SSGCIKVLQM 1091 (1092)
Q Consensus 1036 ~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs-~DG~V~vW~l 1091 (1092)
..++....... . . .-.....+....+.+++|+|||+.|+.++ .+|...||.+
T Consensus 328 ~~~~~~~l~~~-~-~--~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 328 KNGTQHRVARH-D-T--SWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp TTTEEEEEEEC-C-C--CCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred cCCceEEeccc-c-C--cccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 87654322110 0 0 00000011112467789999999887655 5787777754
No 411
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.70 E-value=9.4e-17 Score=201.40 Aligned_cols=271 Identities=10% Similarity=0.078 Sum_probs=181.3
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCC---CCeEEEEEecCCCCEEEEEEC---------CC
Q 001366 784 SISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR---SKLSCVCWNNYIKNYLASADY---------DG 851 (1092)
Q Consensus 784 sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~---~~V~~v~~sp~~~~~LaSgs~---------Dg 851 (1092)
+++|+|+|+++++ +.|++|++||+.+... ......+. ..|.+++|+|+ +++|++++. |+
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~-------~~~~~~~~~~~~~~~~~~~SpD-g~~la~~~~~~~~~~~s~~~ 90 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQS-------YTILSNRTMKSVNASNYGLSPD-RQFVYLESDYSKLWRYSYTA 90 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCE-------EEEECHHHHHTTTCSEEEECTT-SSEEEEEEEEEECSSSCEEE
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcE-------EEEEccccccccceeeEEECCC-CCeEEEEecCceeEEeecce
Confidence 5789999965555 4699999999875211 11111121 14889999998 888888876 79
Q ss_pred cEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEec--CCce-------------
Q 001366 852 VVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKN--IANV------------- 916 (1092)
Q Consensus 852 tV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~--~~~V------------- 916 (1092)
+|++||+.+++.+... .....+.+++|+| +++.||+++ |+.|++||+.+++....... ...|
T Consensus 91 ~i~~~d~~~g~~~~~~-~l~~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~ 167 (719)
T 1z68_A 91 TYYIYDLSNGEFVRGN-ELPRPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEM 167 (719)
T ss_dssp EEEEEETTTTEECCSS-CCCSSBCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHT
T ss_pred EEEEEECCCCccccce-ecCcccccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeec
Confidence 9999999988762111 1135688999999 899998886 78999999998876543321 1112
Q ss_pred ----EEEEEccCCCeEEEEEECCC----------------------------------eEEEEEcCCCCcc--eE-----
Q 001366 917 ----CCVQFSAHSSHLLAFGSADY----------------------------------RTYCYDLRNARAP--WC----- 951 (1092)
Q Consensus 917 ----~sl~fsp~~~~~latgs~Dg----------------------------------~I~vwDlr~~~~~--~~----- 951 (1092)
.+++|+|||. .|++++.|. .|++||+.+++.. +.
T Consensus 168 ~~~~~~~~wSPDG~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 246 (719)
T 1z68_A 168 LATKYALWWSPNGK-FLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPA 246 (719)
T ss_dssp TCSSCCEEECTTSS-EEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCH
T ss_pred ccCcccEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCc
Confidence 4899999996 677766542 7899999876431 11
Q ss_pred EecCCCCCeEEEEEcCCCEEE-EEECC----CeEEEEE----cCCCCCCCCCCCceeEEE----cCCCCCeE-----EEE
Q 001366 952 VLAGHEKAVSYVKFLDSGTLV-TASTD----NKLKLWD----LKRTSHTGPSTNACSLTF----SGHTNEKN-----FVG 1013 (1092)
Q Consensus 952 ~l~~H~~~V~~v~fs~~~~L~-Sgs~D----g~I~vWD----l~~~~~~~~~~~~~~~~l----~~h~~~V~-----~v~ 1013 (1092)
.+.+|...+..++|++++.++ +.... ..|.+|| +.++ .+...+ .+|...+. .+.
T Consensus 247 ~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (719)
T 1z68_A 247 MIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW--------DCPKTQEHIEESRTGWAGGFFVSTPV 318 (719)
T ss_dssp HHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE--------ECCGGGEEEEECSSSCSSSSSCCCCE
T ss_pred cCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC--------ceEEEEecccccCCceEccccCCccE
Confidence 134688889999999556544 43322 2488899 6532 222222 35666666 789
Q ss_pred EecCCCEEEE--EecCC--cEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecC-----C
Q 001366 1014 LSTADGYIAC--GSESN--EVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSS-----G 1084 (1092)
Q Consensus 1014 ~spdg~~las--gs~Dg--~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~D-----G 1084 (1092)
|+|||+.|+. +..++ .|++|+...++.. . ...+...|..+.++ ++..|+..+.+ +
T Consensus 319 ~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~-~--------------lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~ 382 (719)
T 1z68_A 319 FSYDAISYYKIFSDKDGYKHIHYIKDTVENAI-Q--------------ITSGKWEAINIFRV-TQDSLFYSSNEFEEYPG 382 (719)
T ss_dssp ECTTSSCEEEEEECTTSCEEEEEESSCSTTCE-E--------------CSCSSSCEEEEEEE-CSSEEEEEESCGGGCTT
T ss_pred ECCCCCeEEEEEEccCCceEEEEEECCCCceE-e--------------cccCceEEEEEEEE-eCCEEEEEEecCCCCCc
Confidence 9999995543 44555 5666776554421 1 12233457777777 87777766654 8
Q ss_pred eEEEEEc
Q 001366 1085 CIKVLQM 1091 (1092)
Q Consensus 1085 ~V~vW~l 1091 (1092)
.+++|.+
T Consensus 383 ~~~l~~~ 389 (719)
T 1z68_A 383 RRNIYRI 389 (719)
T ss_dssp CBEEEEE
T ss_pred eEEEEEE
Confidence 8899875
No 412
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.70 E-value=3e-15 Score=168.78 Aligned_cols=272 Identities=8% Similarity=-0.004 Sum_probs=179.3
Q ss_pred EEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEE-EEeCCCcEEEEEcCCCCCCCcccccceeeec
Q 001366 748 LGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFA-AAGVSKKIKIFEFNALFNDSVDVYYPAVEMS 826 (1092)
Q Consensus 748 l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~la-tgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~ 826 (1092)
++...++.+.+|+....+....+.. +....+..++|+|+|++++ ++..++.|.+||+.+.. . .......
T Consensus 15 v~~~~~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~---~---~~~~~~~ 84 (349)
T 1jmx_B 15 IVTNYPNNLHVVDVASDTVYKSCVM----PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK---N---TFHANLS 84 (349)
T ss_dssp EEEETTTEEEEEETTTTEEEEEEEC----SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE---E---EEEEESC
T ss_pred EEeCCCCeEEEEECCCCcEEEEEec----CCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc---E---EEEEEcc
Confidence 3566889999999988776655442 1212466799999998654 55578999999986521 0 0011111
Q ss_pred C-----CCCeEEEEEecCCCCEEEEEECC------------CcEEEEECCCCc---eEEEeeccCccEEEEEEecCCCCE
Q 001366 827 N-----RSKLSCVCWNNYIKNYLASADYD------------GVVKLWDACTGQ---TVSHYIEHEKRAWSVDFSQVHPTK 886 (1092)
Q Consensus 827 h-----~~~V~~v~~sp~~~~~LaSgs~D------------gtV~IWD~~tg~---~i~~l~~h~~~V~sv~fsp~~~~~ 886 (1092)
+ ...+.+++|+|+ +++|++++.+ +.|.+||+.+++ .+..+. +...+.+++|+| +++
T Consensus 85 ~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~-dg~- 160 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPD-GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAAD-DGS- 160 (349)
T ss_dssp CSTTEEEECSSCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECT-TSC-
T ss_pred cccccccccccceEECCC-CCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECC-CCc-
Confidence 1 223788999998 7888888765 999999998854 334444 344688999999 777
Q ss_pred EEEEeCCCcEEEEecCCCceeeeEecCC-------------------------ceEEEEEccCCCeEEEEEECCCeEEEE
Q 001366 887 LASGSDDCSVKLWNINEKNSLATIKNIA-------------------------NVCCVQFSAHSSHLLAFGSADYRTYCY 941 (1092)
Q Consensus 887 laSgs~Dg~I~iWDl~~~~~l~~l~~~~-------------------------~V~sl~fsp~~~~~latgs~Dg~I~vw 941 (1092)
+++++. .|.+||+.+++.+..+.... ...++++++++............+..+
T Consensus 161 l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 238 (349)
T 1jmx_B 161 LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 238 (349)
T ss_dssp EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEE
T ss_pred EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEE
Confidence 555544 49999999998887765332 345566766542111111111122235
Q ss_pred EcCCCCcceEEecCCCCCeEEEEEcC--CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCC
Q 001366 942 DLRNARAPWCVLAGHEKAVSYVKFLD--SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADG 1019 (1092)
Q Consensus 942 Dlr~~~~~~~~l~~H~~~V~~v~fs~--~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~ 1019 (1092)
|..+.+.....+..+...+..++|++ +++++++ ++.|.+||+.+ +..+..+.. ...+.+++|+|+|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~--------~~~~~~~~~-~~~~~~~~~s~dg~ 307 (349)
T 1jmx_B 239 DLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQ--------RKLIKAANL-DHTYYCVAFDKKGD 307 (349)
T ss_dssp ETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTT--------TEEEEEEEC-SSCCCEEEECSSSS
T ss_pred eccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECcc--------CeEEEEEcC-CCCccceEECCCCC
Confidence 55544432223334566788999985 4566666 88999999983 444455543 23467899999999
Q ss_pred EEEEEecCCcEEEEeCCCCCceeeeec
Q 001366 1020 YIACGSESNEVYAYHRSLPMPITSYKF 1046 (1092)
Q Consensus 1020 ~lasgs~Dg~I~Iwd~~~~~~i~~~~~ 1046 (1092)
+|++++.++.|++||..+++.+..++.
T Consensus 308 ~l~~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 308 KLYLGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp CEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred EEEEecCCCeEEEEeccccceeeeeec
Confidence 888888899999999999988887764
No 413
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.70 E-value=1.5e-18 Score=210.38 Aligned_cols=129 Identities=17% Similarity=-0.011 Sum_probs=91.1
Q ss_pred hccccceeeeCCCCCccccccccccccccccccCc-h------hhHhhhhhhhhhccCCCCCCCccccceecCCCCCCCc
Q 001366 219 TLKGKGIVCRGPPLNAFKERRGMIDTKAFVTTTMP-S------DAALKAAGAMMVASNASPKPVGVGTAVVSNGSLDLGA 291 (1092)
Q Consensus 219 ~~~g~Gvv~~g~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (1092)
..++.|.||++...+ ..++.|.+...... . ......++..++...+|||++............+
T Consensus 345 G~G~fg~Vy~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~--- 415 (540)
T 3en9_A 345 GKGAEADIKRDSYLD------FDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKR--- 415 (540)
T ss_dssp ---CCEEEEEEECSS------CEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTE---
T ss_pred eeCCCEEEEEEEECC------CeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccE---
Confidence 445789999995533 22223222211111 0 1122466777788889999994322222222222
Q ss_pred cCCCCCccccCCCcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEe
Q 001366 292 RTGVPASCWIGGLRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371 (1092)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~ 371 (1092)
++||||+|++|.++|+. ++.|+.||++||+|||++||+||||||+|||++. .+||+
T Consensus 416 -------------lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~ 471 (540)
T 3en9_A 416 -------------IMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYII 471 (540)
T ss_dssp -------------EEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEEC
T ss_pred -------------EEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEE
Confidence 48999999999999975 5689999999999999999999999999999988 99999
Q ss_pred ccccccccc
Q 001366 372 GPIIQKETL 380 (1092)
Q Consensus 372 Dfg~~~~~~ 380 (1092)
|||+++...
T Consensus 472 DFGla~~~~ 480 (540)
T 3en9_A 472 DFGLGKISN 480 (540)
T ss_dssp CCTTCEECC
T ss_pred ECccCEECC
Confidence 999998755
No 414
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.69 E-value=4.4e-15 Score=170.72 Aligned_cols=243 Identities=7% Similarity=0.053 Sum_probs=164.9
Q ss_pred CCCeEEEEEecCCCCEEEEEECCCcEEEEECC-CCceEEEeecc-CccEEEEEEecCCCCE--EEEEe------------
Q 001366 828 RSKLSCVCWNNYIKNYLASADYDGVVKLWDAC-TGQTVSHYIEH-EKRAWSVDFSQVHPTK--LASGS------------ 891 (1092)
Q Consensus 828 ~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~-tg~~i~~l~~h-~~~V~sv~fsp~~~~~--laSgs------------ 891 (1092)
...+..++|+|+ +++|++++.+ .|.+||+. +++........ ...+.+++|+| +++. +++++
T Consensus 39 ~~~~~~~a~spd-g~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 39 DEPISWMTFDHE-RKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADT-NTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp TCCCSEEEECTT-SSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCcEEEECCC-CCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECC-CCCEEEEEEecCCcceeccceee
Confidence 456789999998 8888899888 99999997 77655433211 12355689999 7773 45553
Q ss_pred -CCCcEEEEecC-CCceeeeEe-----cCCceEEEEEccCCCeEEEEEE-CCCeEEEEEcC-CCCcc-eEEec--CCCCC
Q 001366 892 -DDCSVKLWNIN-EKNSLATIK-----NIANVCCVQFSAHSSHLLAFGS-ADYRTYCYDLR-NARAP-WCVLA--GHEKA 959 (1092)
Q Consensus 892 -~Dg~I~iWDl~-~~~~l~~l~-----~~~~V~sl~fsp~~~~~latgs-~Dg~I~vwDlr-~~~~~-~~~l~--~H~~~ 959 (1092)
.++++.+|++. .++....+. +...+.+++|+|+|. +++++. .++.|++||+. +++.. +..+. .|...
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~-~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~ 194 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET-YLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDH 194 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS-EEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCC
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC-EEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCC
Confidence 68999999997 465544443 346799999999996 455544 57899999998 55421 22232 24667
Q ss_pred eEEEEEc-CCCEEEEEEC-CCeEEEEEcCCCCCCCCCCCcee---EEEc-------CCCC------CeEEEE-EecCCCE
Q 001366 960 VSYVKFL-DSGTLVTAST-DNKLKLWDLKRTSHTGPSTNACS---LTFS-------GHTN------EKNFVG-LSTADGY 1020 (1092)
Q Consensus 960 V~~v~fs-~~~~L~Sgs~-Dg~I~vWDl~~~~~~~~~~~~~~---~~l~-------~h~~------~V~~v~-~spdg~~ 1020 (1092)
+..++|+ +++++++++. ++.|.+|++... .+... ..+. +|.. .+..++ |+|||++
T Consensus 195 p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~------~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~ 268 (365)
T 1jof_A 195 PRWVAMHPTGNYLYALMEAGNRICEYVIDPA------THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKY 268 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTT------TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSE
T ss_pred CCEeEECCCCCEEEEEECCCCeEEEEEEeCC------CCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCE
Confidence 9999999 5567777764 789999987621 11211 1121 2222 478899 9999998
Q ss_pred EEEEecC-C-----cEEEEeCC-CCCceeeeeccccCCCCCccccCCCCCCEEEEEEeC---CCCEEEEEecC-CeEEEE
Q 001366 1021 IACGSES-N-----EVYAYHRS-LPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRR---RSDMVVAANSS-GCIKVL 1089 (1092)
Q Consensus 1021 lasgs~D-g-----~I~Iwd~~-~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~sp---d~~~Lasgs~D-G~V~vW 1089 (1092)
|++++.+ + .|.+|++. .++....... ...+...+..++|+| ++++|++++.+ +.|+||
T Consensus 269 l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~-----------~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~ 337 (365)
T 1jof_A 269 MFASSRANKFELQGYIAGFKLRDCGSIEKQLFL-----------SPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIY 337 (365)
T ss_dssp EEEEEEESSTTSCCEEEEEEECTTSCEEEEEEE-----------EECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEE
T ss_pred EEEECCCCCCCCCCeEEEEEECCCCCEEEeeee-----------eecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEE
Confidence 8766543 3 89999986 4443221100 011223355789999 89999999875 899999
Q ss_pred Ec
Q 001366 1090 QM 1091 (1092)
Q Consensus 1090 ~l 1091 (1092)
++
T Consensus 338 ~~ 339 (365)
T 1jof_A 338 RW 339 (365)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 415
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.65 E-value=3.3e-14 Score=179.34 Aligned_cols=310 Identities=12% Similarity=0.005 Sum_probs=192.8
Q ss_pred ccCCCCcEEeEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCC---------CcEEEEEcCCC
Q 001366 741 IQNPTDRLGAFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVS---------KKIKIFEFNAL 811 (1092)
Q Consensus 741 ~~~~~~~l~~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D---------~~I~Iwd~~~~ 811 (1092)
.|.|++.+..+.|+.+++|+....+....+..+.+..+.....+++|||||++||.++.+ +.+.|||+.+.
T Consensus 23 ~w~~dg~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~ 102 (740)
T 4a5s_A 23 RWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR 102 (740)
T ss_dssp EECSSSEEEEEETTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT
T ss_pred EECCCCcEEEEcCCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCC
Confidence 467777665555999999999877665544432222232233458899999999999876 45679998762
Q ss_pred CCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEE-eeccCccE----------------
Q 001366 812 FNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSH-YIEHEKRA---------------- 874 (1092)
Q Consensus 812 ~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~-l~~h~~~V---------------- 874 (1092)
.. .....+...+..++|+|+ ++.||.++ |+.|++||+.+++..+. ..++...+
T Consensus 103 ~~--------~~l~~~~~~~~~~~~SPd-G~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 103 QL--------ITEERIPNNTQWVTWSPV-GHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp EE--------CCSSCCCTTEEEEEECSS-TTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred cE--------EEcccCCCcceeeEECCC-CCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCC
Confidence 21 112235678999999999 78888774 78999999988875432 22333222
Q ss_pred -EEEEEecCCCCEEEEEeCCC------------------------------------cEEEEecCC---Cce--eeeEe-
Q 001366 875 -WSVDFSQVHPTKLASGSDDC------------------------------------SVKLWNINE---KNS--LATIK- 911 (1092)
Q Consensus 875 -~sv~fsp~~~~~laSgs~Dg------------------------------------~I~iWDl~~---~~~--l~~l~- 911 (1092)
..+.|+| |++.||.++.|. +|.+||+.+ +.+ ...+.
T Consensus 173 ~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~ 251 (740)
T 4a5s_A 173 YSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITA 251 (740)
T ss_dssp SBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECC
T ss_pred CcceEECC-CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecC
Confidence 3489999 899998876432 478899988 732 22332
Q ss_pred ------cCCceEEEEEccCCCeEEEEEEC----CCeEEEEEcCCCC-------cceEEecCCCCCeE-----EEEEc-CC
Q 001366 912 ------NIANVCCVQFSAHSSHLLAFGSA----DYRTYCYDLRNAR-------APWCVLAGHEKAVS-----YVKFL-DS 968 (1092)
Q Consensus 912 ------~~~~V~sl~fsp~~~~~latgs~----Dg~I~vwDlr~~~-------~~~~~l~~H~~~V~-----~v~fs-~~ 968 (1092)
+...+..++|+|+|. +++.... +..|++||+.+++ .....-.+|...|. .+.|+ ++
T Consensus 252 ~~~~~~~~~~~~~~~wspdg~-~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG 330 (740)
T 4a5s_A 252 PASMLIGDHYLCDVTWATQER-ISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDG 330 (740)
T ss_dssp CHHHHTSCEEEEEEEEEETTE-EEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTS
T ss_pred CccCCCCCeEEEEEEEeCCCe-EEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCC
Confidence 344589999999995 5554433 3479999998876 11111245666554 78898 56
Q ss_pred CEEE-EEEC-C--CeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecC-----CcEEEEe--CCC
Q 001366 969 GTLV-TAST-D--NKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSES-----NEVYAYH--RSL 1037 (1092)
Q Consensus 969 ~~L~-Sgs~-D--g~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~D-----g~I~Iwd--~~~ 1037 (1092)
+.|+ ..+. + ..|.+||+... . ...+......+..+. .++++.|+..+.. +...||. +..
T Consensus 331 ~~l~~~~s~~~G~~~l~~~~~~~~--------~-~~~lT~g~~~v~~~~-~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g 400 (740)
T 4a5s_A 331 NSFYKIISNEEGYRHICYFQIDKK--------D-CTFITKGTWEVIGIE-ALTSDYLYYISNEYKGMPGGRNLYKIQLID 400 (740)
T ss_dssp SEEEEEEECTTSCEEEEEEETTCS--------S-CEESCCSSSCEEEEE-EECSSEEEEEESCGGGCTTCBEEEEEETTE
T ss_pred CEEEEEEEcCCCceEEEEEECCCC--------c-eEecccCCEEEEEEE-EEeCCEEEEEEecCCCCCceeEEEEEECCC
Confidence 6666 5653 3 35888888732 1 234444444555543 2456655544432 3344554 333
Q ss_pred CCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEec
Q 001366 1038 PMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANS 1082 (1092)
Q Consensus 1038 ~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~ 1082 (1092)
+.....+.. ...+....+..+.|+|++.+++....
T Consensus 401 ~~~~~~lt~----------~~~~~~~~~~~~~~S~dg~~~~~~~s 435 (740)
T 4a5s_A 401 YTKVTCLSC----------ELNPERCQYYSVSFSKEAKYYQLRCS 435 (740)
T ss_dssp EEEEEESST----------TTSTTTBCBEEEEECTTSSEEEEEEC
T ss_pred CCcceeecc----------ccCCCCCceEEEEECCCCCEEEEEeC
Confidence 222111110 00122356889999999998765443
No 416
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.65 E-value=3.8e-14 Score=162.84 Aligned_cols=243 Identities=12% Similarity=0.094 Sum_probs=164.7
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEEcC-CCCCCCcccccceeeecCCCCeEEEEEecCCCC--EEEEEE-------
Q 001366 779 ANVICSISFDRDEDHFAAAGVSKKIKIFEFN-ALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKN--YLASAD------- 848 (1092)
Q Consensus 779 ~~~V~sl~fspdg~~latgg~D~~I~Iwd~~-~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~--~LaSgs------- 848 (1092)
...+..++|+|+|++|++++.+ .|.+|++. ... . . ........+.+.+++|+|+ ++ ++++++
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~---~--~-~~~~~~~~g~~~~~~~spd-g~~l~~~~~~~~~~~~~ 110 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTE---I--V-HEASHPIGGHPRANDADTN-TRAIFLLAAKQPPYAVY 110 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTE---E--E-EEEEEECCSSGGGGCTTSC-CEEEEEEECSSTTCCEE
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCC---E--E-EeeEeecCCCCccEEECCC-CCEEEEEEecCCcceec
Confidence 3457789999999999999888 99999985 311 1 0 0111111123566889998 66 355553
Q ss_pred ------CCCcEEEEECC-CCceEEEee----ccCccEEEEEEecCCCCEEEEEe-CCCcEEEEecC-CCcee--eeEe--
Q 001366 849 ------YDGVVKLWDAC-TGQTVSHYI----EHEKRAWSVDFSQVHPTKLASGS-DDCSVKLWNIN-EKNSL--ATIK-- 911 (1092)
Q Consensus 849 ------~DgtV~IWD~~-tg~~i~~l~----~h~~~V~sv~fsp~~~~~laSgs-~Dg~I~iWDl~-~~~~l--~~l~-- 911 (1092)
.+|++.+|++. +++....+. .+...+.+++|+| +++.+++++ .++.|.+||+. +++.. ..+.
T Consensus 111 ~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~ 189 (365)
T 1jof_A 111 ANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAP 189 (365)
T ss_dssp EEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS
T ss_pred cceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecC
Confidence 68999999997 466544443 2456789999999 888777765 46899999998 67643 3343
Q ss_pred -cCCceEEEEEccCCCeEEEEEE-CCCeEEEEEcC--CCCcc-----eEEec----CCCC------CeEEEE-Ec-CCCE
Q 001366 912 -NIANVCCVQFSAHSSHLLAFGS-ADYRTYCYDLR--NARAP-----WCVLA----GHEK------AVSYVK-FL-DSGT 970 (1092)
Q Consensus 912 -~~~~V~sl~fsp~~~~~latgs-~Dg~I~vwDlr--~~~~~-----~~~l~----~H~~------~V~~v~-fs-~~~~ 970 (1092)
+...+..++|+|+|. ++++++ .++.|.+|++. +++.. +..+. +|.. .+..++ |+ ++++
T Consensus 190 ~~g~~p~~~~~spdg~-~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~ 268 (365)
T 1jof_A 190 DPGDHPRWVAMHPTGN-YLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKY 268 (365)
T ss_dssp STTCCEEEEEECTTSS-EEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSE
T ss_pred CCCCCCCEeEECCCCC-EEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCE
Confidence 245689999999997 555554 57899999875 33321 11121 2232 588999 98 5667
Q ss_pred EEEEECC-C-----eEEEEEcCCCCCCCCCCCceeE---EEcCCCCCeEEEEEec---CCCEEEEEec-CCcEEEEeCCC
Q 001366 971 LVTASTD-N-----KLKLWDLKRTSHTGPSTNACSL---TFSGHTNEKNFVGLST---ADGYIACGSE-SNEVYAYHRSL 1037 (1092)
Q Consensus 971 L~Sgs~D-g-----~I~vWDl~~~~~~~~~~~~~~~---~l~~h~~~V~~v~~sp---dg~~lasgs~-Dg~I~Iwd~~~ 1037 (1092)
|++++.+ + +|.+|++.. .+.... ....+...+..++|+| +|++|++++. ++.|.||++..
T Consensus 269 l~v~~~~~~~~~~~~i~v~~~~~-------~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 269 MFASSRANKFELQGYIAGFKLRD-------CGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp EEEEEEESSTTSCCEEEEEEECT-------TSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred EEEECCCCCCCCCCeEEEEEECC-------CCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 7766543 3 899999962 122221 2333455567889999 8999998886 48999998865
Q ss_pred C
Q 001366 1038 P 1038 (1092)
Q Consensus 1038 ~ 1038 (1092)
.
T Consensus 342 ~ 342 (365)
T 1jof_A 342 E 342 (365)
T ss_dssp T
T ss_pred h
Confidence 4
No 417
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.64 E-value=1.6e-13 Score=151.23 Aligned_cols=235 Identities=11% Similarity=0.117 Sum_probs=173.7
Q ss_pred CCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeec------cCccEEEEEEecCCCCEEEEEeC-CCcEEEEe
Q 001366 828 RSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIE------HEKRAWSVDFSQVHPTKLASGSD-DCSVKLWN 900 (1092)
Q Consensus 828 ~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~------h~~~V~sv~fsp~~~~~laSgs~-Dg~I~iWD 900 (1092)
-....+++++++ +.++++.+.++.|++||.. ++.+..+.. |...+.++++.+.++.++++... ++.|.+||
T Consensus 29 ~~~p~~v~~~~~-g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 29 FTEPSGVAVNAQ-NDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp BSCEEEEEECTT-CCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred cCCCceEEECCC-CCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 456789999997 7888888889999999986 666666642 34568899995436666666643 89999999
Q ss_pred cCCCceeeeEec--CCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEec--CCCCCeEEEEEcCC-CEEEEEE
Q 001366 901 INEKNSLATIKN--IANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLA--GHEKAVSYVKFLDS-GTLVTAS 975 (1092)
Q Consensus 901 l~~~~~l~~l~~--~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~--~H~~~V~~v~fs~~-~~L~Sgs 975 (1092)
.+++.+..+.. ...+.+++++|++. ++++...++.|++||... + .+..+. ++...+..|+++++ ..+++.+
T Consensus 107 -~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g-~-~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 107 -QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNG-N-VLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp -TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTS-C-EEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred -CCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCC-C-EEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 56777776653 35689999999985 777777889999999653 2 233332 45567899999854 4455556
Q ss_pred CCCeEEEEEcCCCCCCCCCCCceeEEEcCC--CCCeEEEEEecCCCEEEEEecCC-cEEEEeCCCCCceeeeeccccCCC
Q 001366 976 TDNKLKLWDLKRTSHTGPSTNACSLTFSGH--TNEKNFVGLSTADGYIACGSESN-EVYAYHRSLPMPITSYKFGSIDPI 1052 (1092)
Q Consensus 976 ~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h--~~~V~~v~~spdg~~lasgs~Dg-~I~Iwd~~~~~~i~~~~~~~~~~i 1052 (1092)
.++.|.+||.. +..+..+..+ ...+..++++++|.++++...++ .|.+|+. .++.+..+..
T Consensus 183 ~~~~i~~~~~~---------g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~------ 246 (286)
T 1q7f_A 183 RAHCVKVFNYE---------GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALES------ 246 (286)
T ss_dssp GGTEEEEEETT---------CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEE------
T ss_pred CCCEEEEEcCC---------CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcc------
Confidence 78999999975 2344555433 46788999999999888888886 9999995 4555554431
Q ss_pred CCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1053 SGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1053 ~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
......+.+++|+|+++++++ +.|+.|+||++
T Consensus 247 ------~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 247 ------KVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp ------SSCCSCEEEEEEETTTEEEEE-ETTTEEEEEEC
T ss_pred ------cCCCCcceeEEECCCCcEEEE-CCCCeEEEEEc
Confidence 112235789999999987777 67999999986
No 418
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.62 E-value=5e-15 Score=170.30 Aligned_cols=283 Identities=10% Similarity=0.025 Sum_probs=177.6
Q ss_pred CEEEEEEcCCCCEEEEEeCC---CcEEEEEcCCCCCCCcccccceeeecCCCC-eEEEEEecCCCCEEEEEECCCcEEEE
Q 001366 781 VICSISFDRDEDHFAAAGVS---KKIKIFEFNALFNDSVDVYYPAVEMSNRSK-LSCVCWNNYIKNYLASADYDGVVKLW 856 (1092)
Q Consensus 781 ~V~sl~fspdg~~latgg~D---~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~-V~~v~~sp~~~~~LaSgs~DgtV~IW 856 (1092)
.+.+++|+|||++||.+... ..|.+|++..... .....+... ..++.|+|+ ++.|+.++.++.|++|
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~--------~~l~~~~~~~~~~~~~spd-g~~l~~~~~~~~l~~~ 107 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQA--------VQLTEGKGDNTFGGFISTD-ERAFFYVKNELNLMKV 107 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEE--------EECCCSSCBCTTTCEECTT-SSEEEEEETTTEEEEE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcE--------EEeecCCCCccccceECCC-CCEEEEEEcCCcEEEE
Confidence 36678999999998877543 3677778754210 111112222 334789998 8899999999999999
Q ss_pred ECCCCceEEEeeccCccEEE-------------------EEEecCCCCEEEEE-----eCCCcEEEEecCCCceeeeEec
Q 001366 857 DACTGQTVSHYIEHEKRAWS-------------------VDFSQVHPTKLASG-----SDDCSVKLWNINEKNSLATIKN 912 (1092)
Q Consensus 857 D~~tg~~i~~l~~h~~~V~s-------------------v~fsp~~~~~laSg-----s~Dg~I~iWDl~~~~~l~~l~~ 912 (1092)
|+.+++....+..+...... +.|+| +++.++.+ ..+..|.+||+.+++......+
T Consensus 108 d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~ 186 (396)
T 3c5m_A 108 DLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQD 186 (396)
T ss_dssp ETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEE
T ss_pred ECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceEEEEECCCCcEEeeccC
Confidence 99988766555544442222 34566 55554433 3567899999998887666667
Q ss_pred CCceEEEEEcc-CCCeEEEEEECC------CeEEEEEcCCCCcceEEecCC--CCCeEEEEEc-CCCEEEEEECC-----
Q 001366 913 IANVCCVQFSA-HSSHLLAFGSAD------YRTYCYDLRNARAPWCVLAGH--EKAVSYVKFL-DSGTLVTASTD----- 977 (1092)
Q Consensus 913 ~~~V~sl~fsp-~~~~~latgs~D------g~I~vwDlr~~~~~~~~l~~H--~~~V~~v~fs-~~~~L~Sgs~D----- 977 (1092)
...+..+.|+| ++. .|+..+.+ ..|++||+.... ...+..+ ...+..+.|+ +++.|+.++.+
T Consensus 187 ~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 263 (396)
T 3c5m_A 187 TAWLGHPIYRPFDDS-TVGFCHEGPHDLVDARMWLVNEDGSN--VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTD 263 (396)
T ss_dssp SSCEEEEEEETTEEE-EEEEEECSCSSSCSCCCEEEETTSCC--CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCC
T ss_pred CcccccceECCCCCC-EEEEEecCCCCCCCceEEEEECCCCc--eeEeeccCCCccccceEECCCCCEEEEEecCCCCcc
Confidence 77899999999 664 45554433 468899987543 2333333 2357888999 56667766544
Q ss_pred CeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEec-CCCEEEEEe----------------cCCcEEEEeCCCCCc
Q 001366 978 NKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLST-ADGYIACGS----------------ESNEVYAYHRSLPMP 1040 (1092)
Q Consensus 978 g~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~sp-dg~~lasgs----------------~Dg~I~Iwd~~~~~~ 1040 (1092)
+.|.+||+.++ ... .+.... ... +.|+| +|++|++++ .+..|++||...++.
T Consensus 264 ~~l~~~d~~~g--------~~~-~l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 264 RVIYKANPETL--------ENE-EVMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp EEEEEECTTTC--------CEE-EEEECC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred ceEEEEECCCC--------CeE-EeeeCC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence 45999998743 211 111111 233 89999 999888765 347899999887654
Q ss_pred eeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEec-CCeEEEEEc
Q 001366 1041 ITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANS-SGCIKVLQM 1091 (1092)
Q Consensus 1041 i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~-DG~V~vW~l 1091 (1092)
...... . .... ....+....+..++|+|+++.|+.++. +|...||.+
T Consensus 333 ~~l~~~-~-~~~~--~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 333 QKLCKH-S-TSWD--VLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp CEEEEC-C-CCCC--CBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred EEccCC-C-Cccc--cccccccCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence 321110 0 0000 000000112556789999998887764 566666653
No 419
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.61 E-value=1.9e-13 Score=157.29 Aligned_cols=285 Identities=12% Similarity=0.094 Sum_probs=193.1
Q ss_pred cCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEe----------CCCcEEEEEcCCCCCCCcccccc
Q 001366 752 FDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAG----------VSKKIKIFEFNALFNDSVDVYYP 821 (1092)
Q Consensus 752 ~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg----------~D~~I~Iwd~~~~~~~~~~~~~~ 821 (1092)
.|+.+.+|+..+.++...+.. +..+ .++|+|||+++.+++ .+++|.+||..+.. .....+
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~-----g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~---~~~~i~ 98 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPT-----AFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT---FEKEIS 98 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEEC-----CEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC---EEEEEE
T ss_pred ccCeEEEEECCCCeEEEEecC-----CCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc---EEEEEE
Confidence 467888999877776655443 3334 799999999998886 36789999986421 100000
Q ss_pred e--eeecCCCCeEEEEEecCCCCEEEEEEC--CCcEEEEECCCCceEEE-eeccCccEEEEEEecCCCCEEEEEeCCCcE
Q 001366 822 A--VEMSNRSKLSCVCWNNYIKNYLASADY--DGVVKLWDACTGQTVSH-YIEHEKRAWSVDFSQVHPTKLASGSDDCSV 896 (1092)
Q Consensus 822 ~--~~~~h~~~V~~v~~sp~~~~~LaSgs~--DgtV~IWD~~tg~~i~~-l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I 896 (1092)
. ....+......++++|+ +++|++++. +++|.+||+.+++.+.. +. +. ..+.+.+.|.....+++.+.||.+
T Consensus 99 ~~~~~~~~g~~p~~i~~spd-g~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-~~-~~~~v~~~p~~~~~~~~~~~dg~~ 175 (361)
T 2oiz_A 99 LPPKRVQGLNYDGLFRQTTD-GKFIVLQNASPATSIGIVDVAKGDYVEDVTA-AA-GCWSVIPQPNRPRSFMTICGDGGL 175 (361)
T ss_dssp ECTTBCCBCCCGGGEEECTT-SSEEEEEEESSSEEEEEEETTTTEEEEEEGG-GT-TEEEEEECTTSSSEEEEEETTSSE
T ss_pred cCccccccCCCcceEEECCC-CCEEEEECCCCCCeEEEEECCCCcEEEEEec-CC-CcceeEEcCCCCeeEEEECCCCcE
Confidence 0 00012345678999998 788887764 68999999999988877 54 22 234567788555788999999999
Q ss_pred EEEecCC-Cceeee------EecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcce-EEecC------CC----C
Q 001366 897 KLWNINE-KNSLAT------IKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPW-CVLAG------HE----K 958 (1092)
Q Consensus 897 ~iWDl~~-~~~l~~------l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~-~~l~~------H~----~ 958 (1092)
.+|++.. ++.... +........+.++|++. .++..+.++.|+++|+......+ ..+.- +. .
T Consensus 176 ~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~ 254 (361)
T 2oiz_A 176 LTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKD-KAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPG 254 (361)
T ss_dssp EEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSS-EEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEEC
T ss_pred EEEEECCCCcEeeeccccceEcCCCCceEEEecccCC-EEEEEeCCCeEEEEEecCCCceecccccccCccccccccccC
Confidence 9999875 554422 22122222344466765 45566788999999997543211 11110 01 1
Q ss_pred CeEEEEEc-CCCEEEEEEC-----------CCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEec
Q 001366 959 AVSYVKFL-DSGTLVTAST-----------DNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSE 1026 (1092)
Q Consensus 959 ~V~~v~fs-~~~~L~Sgs~-----------Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~ 1026 (1092)
....++|+ +++.++.+.. .++|.+||+. +.+.+.++..+. ...++|+|+|++|++++.
T Consensus 255 g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~--------t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~ 324 (361)
T 2oiz_A 255 GYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTK--------TKQRVARIPGRD--ALSMTIDQQRNLMLTLDG 324 (361)
T ss_dssp CSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETT--------TTEEEEEEECTT--CCEEEEETTTTEEEEECS
T ss_pred CeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECC--------CCcEEEEEecCC--eeEEEECCCCCEEEEeCC
Confidence 11126777 5566665543 3589999998 456788888776 899999999999988887
Q ss_pred CCcEEEEeCCCC--CceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCC
Q 001366 1027 SNEVYAYHRSLP--MPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSD 1075 (1092)
Q Consensus 1027 Dg~I~Iwd~~~~--~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~ 1075 (1092)
+.|.|||..++ +.+.++. .++.....++++|+|.
T Consensus 325 -~~v~v~D~~t~~l~~~~~i~--------------~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 325 -GNVNVYDISQPEPKLLRTIE--------------GAAEASLQVQFHPVGG 360 (361)
T ss_dssp -SCEEEEECSSSSCEEEEEET--------------TSCSSEEEEEECCCSC
T ss_pred -CeEEEEECCCCcceeeEEec--------------cCCCCcEEEEecCCCC
Confidence 99999999998 7776642 2355678999999986
No 420
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.61 E-value=2.3e-13 Score=150.00 Aligned_cols=244 Identities=11% Similarity=0.105 Sum_probs=174.8
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccce--eeecCCCCeEEEEEecCCCCEEEEEEC-CCc
Q 001366 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPA--VEMSNRSKLSCVCWNNYIKNYLASADY-DGV 852 (1092)
Q Consensus 776 ~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~--~~~~h~~~V~~v~~sp~~~~~LaSgs~-Dgt 852 (1092)
.++-..+.+++++++|+++++...++.|.+||..... .. .... ....+...+.++++.+..+.++++... ++.
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~---~~-~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~ 101 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRF---KF-QFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQ 101 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCE---EE-EECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCcE---EE-EecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCE
Confidence 3556678999999999999998889999999975311 00 0000 001233568899995433666665533 899
Q ss_pred EEEEECCCCceEEEeec-cCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEec---CCceEEEEEccCCCeE
Q 001366 853 VKLWDACTGQTVSHYIE-HEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKN---IANVCCVQFSAHSSHL 928 (1092)
Q Consensus 853 V~IWD~~tg~~i~~l~~-h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~---~~~V~sl~fsp~~~~~ 928 (1092)
|++|| .+++.+..+.. +...+.++++.+ ++.++++...++.|.+||.. ++.+..+.. ...+.+++++|++. +
T Consensus 102 i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~-l 177 (286)
T 1q7f_A 102 IQIYN-QYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQE-I 177 (286)
T ss_dssp EEEEC-TTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSE-E
T ss_pred EEEEC-CCCcEEEEecCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCC-E
Confidence 99999 57777777643 345689999999 78888888888999999964 566666642 34689999999984 7
Q ss_pred EEEEECCCeEEEEEcCCCCcceEEecCC--CCCeEEEEEc-CCCEEEEEECCC-eEEEEEcCCCCCCCCCCCceeEEEcC
Q 001366 929 LAFGSADYRTYCYDLRNARAPWCVLAGH--EKAVSYVKFL-DSGTLVTASTDN-KLKLWDLKRTSHTGPSTNACSLTFSG 1004 (1092)
Q Consensus 929 latgs~Dg~I~vwDlr~~~~~~~~l~~H--~~~V~~v~fs-~~~~L~Sgs~Dg-~I~vWDl~~~~~~~~~~~~~~~~l~~ 1004 (1092)
+++...++.|++||... + .+..+..+ ...+..|+++ ++..+++...++ .|.+||.. +..+..+..
T Consensus 178 ~v~~~~~~~i~~~~~~g-~-~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~---------g~~~~~~~~ 246 (286)
T 1q7f_A 178 FISDNRAHCVKVFNYEG-Q-YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD---------GQLISALES 246 (286)
T ss_dssp EEEEGGGTEEEEEETTC-C-EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT---------SCEEEEEEE
T ss_pred EEEECCCCEEEEEcCCC-C-EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC---------CCEEEEEcc
Confidence 77777899999999753 2 23444333 3678999998 555666666675 99999964 344555554
Q ss_pred CC--CCeEEEEEecCCCEEEEEecCCcEEEEeCCCCC
Q 001366 1005 HT--NEKNFVGLSTADGYIACGSESNEVYAYHRSLPM 1039 (1092)
Q Consensus 1005 h~--~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~ 1039 (1092)
+. ..+..++++|+|.++++ +.|+.|++|+.....
T Consensus 247 ~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 247 KVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp SSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred cCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence 43 34778999999987777 579999999876543
No 421
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.61 E-value=4.5e-14 Score=175.15 Aligned_cols=283 Identities=9% Similarity=-0.012 Sum_probs=183.8
Q ss_pred eecCCCCCEEEEEEcCCCCEEEEE--eCCCcEEEEEcCCCCCCCcccccceeeecCCCCeE---------EEEEe--cCC
Q 001366 774 EFNNSANVICSISFDRDEDHFAAA--GVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLS---------CVCWN--NYI 840 (1092)
Q Consensus 774 ~l~~h~~~V~sl~fspdg~~latg--g~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~---------~v~~s--p~~ 840 (1092)
.+.+|...|.+++|++++-+++++ +.++...||..... . .......+...+. ...|+ |+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~--~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPD- 89 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD--G-----AEESALPAPWNVRNRVFEYSGFPWAGVPRPA- 89 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT--S-----CEEESSCTTCCBCCCGGGTCCCCEEEECCSS-
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC--C-----CcceeCCCCccccccccccCCccceeeeecC-
Confidence 355788899999999887777777 56888999986321 1 1111222333444 56666 88
Q ss_pred CCE-EEEEEC-CCcEEEEECC--CCceEEEeec-----cCccEEEEEEecCCCCEEEEEeCC----------CcEEEEec
Q 001366 841 KNY-LASADY-DGVVKLWDAC--TGQTVSHYIE-----HEKRAWSVDFSQVHPTKLASGSDD----------CSVKLWNI 901 (1092)
Q Consensus 841 ~~~-LaSgs~-DgtV~IWD~~--tg~~i~~l~~-----h~~~V~sv~fsp~~~~~laSgs~D----------g~I~iWDl 901 (1092)
++. |+.++. +..|.+|++. .+.....+.. |...+.+++|+| +++.|++++.| ..|.+||+
T Consensus 90 g~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~ 168 (662)
T 3azo_A 90 GGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPL 168 (662)
T ss_dssp SSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEET
T ss_pred CCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEEC
Confidence 555 555543 5667777765 2034455655 677899999999 89999988877 58999999
Q ss_pred CC------CceeeeE-ecCCceEEEEEccCCCeEEEEEECC--------CeEEEEEcC-CCC--cceEEecCCCCCeEEE
Q 001366 902 NE------KNSLATI-KNIANVCCVQFSAHSSHLLAFGSAD--------YRTYCYDLR-NAR--APWCVLAGHEKAVSYV 963 (1092)
Q Consensus 902 ~~------~~~l~~l-~~~~~V~sl~fsp~~~~~latgs~D--------g~I~vwDlr-~~~--~~~~~l~~H~~~V~~v 963 (1092)
.+ +...... .+...+..++|+|||. .|++++.+ ..|++||+. ++. .......+|...+..+
T Consensus 169 ~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~-~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~ 247 (662)
T 3azo_A 169 DGSAAADRSAVRELSDDAHRFVTGPRLSPDGR-QAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQA 247 (662)
T ss_dssp TSTTTTCGGGSEESSCSCSSEECCCEECTTSS-EEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEE
T ss_pred CCCccccCCceeEEEecCCCcccCceECCCCC-EEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcce
Confidence 88 5544433 4456788899999996 66666544 489999998 441 3334445567889999
Q ss_pred EEc-CCCEEEEEECCC--eEEEEEcCCCCCCCCCCCceeEEEcCCCCC--------eEEEEEecCCCEEEEEecCCcEEE
Q 001366 964 KFL-DSGTLVTASTDN--KLKLWDLKRTSHTGPSTNACSLTFSGHTNE--------KNFVGLSTADGYIACGSESNEVYA 1032 (1092)
Q Consensus 964 ~fs-~~~~L~Sgs~Dg--~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~--------V~~v~~spdg~~lasgs~Dg~I~I 1032 (1092)
.|+ ++..+++++.++ .|.+||+.+. ........+... +..++|+|++.++++++. +.++|
T Consensus 248 ~~spdg~l~~~~~~~~~~~l~~~~~~~~--------~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l 318 (662)
T 3azo_A 248 EWAPDGSLIVATDRTGWWNLHRVDPATG--------AATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVL 318 (662)
T ss_dssp EECTTSCEEEEECTTSSCEEEEECTTTC--------CEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEE
T ss_pred EECCCCeEEEEECCCCCeEEEEEECCCC--------ceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEE
Confidence 999 566677777888 5555555422 211111122111 457899999999999998 99999
Q ss_pred E--eCCCCCceeeeeccccCCCCCccccCCCCCCEEEE-EEeCCCCEEEEEecCCeEEEEE
Q 001366 1033 Y--HRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSV-CWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1033 w--d~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sv-a~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
| +...+. +..+ ..+...+..+ +++++.-++++++.+....||.
T Consensus 319 ~~~d~~~~~-~~~l--------------~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 319 GILDPESGE-LVDA--------------AGPWTEWAATLTVSGTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp EEEETTTTE-EEEC--------------CSSCCEEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred EEEECCCCc-EEEe--------------cCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEE
Confidence 9 444333 3222 2334556666 5554444455556665555554
No 422
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.60 E-value=4.6e-14 Score=178.01 Aligned_cols=243 Identities=8% Similarity=0.000 Sum_probs=162.4
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCC-----CCeEEEEEecCCCCEEEEEECC------
Q 001366 782 ICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR-----SKLSCVCWNNYIKNYLASADYD------ 850 (1092)
Q Consensus 782 V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~-----~~V~~v~~sp~~~~~LaSgs~D------ 850 (1092)
..++.|+|||++++++ |++|++||+.+... ......|. .....+.|+|| +++|+.++.+
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~Spd-g~~l~~~~~~~~~~r~ 88 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNS-------SVFLENSTFDEFGHSINDYSISPD-GQFILLEYNYVKQWRH 88 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCE-------EEEECTTTTTTCCSCCCEEEECTT-SSEEEEEEEEEECSSS
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCce-------EEEEechhhhhhcccccceEECCC-CCEEEEEECCeeeEEE
Confidence 4468999999999886 89999999876321 11122222 12345899998 8888888876
Q ss_pred ---CcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cC-Cce---------
Q 001366 851 ---GVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NI-ANV--------- 916 (1092)
Q Consensus 851 ---gtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~-~~V--------- 916 (1092)
+.+.+||+.+++.. .+..|...+..++|+| +++.||.++ |+.|.+||+.++.....-. .. ..+
T Consensus 89 ~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SP-dG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~ 165 (740)
T 4a5s_A 89 SYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSP-VGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVY 165 (740)
T ss_dssp CEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHH
T ss_pred ccceEEEEEECCCCcEE-EcccCCCcceeeEECC-CCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccc
Confidence 55679999998754 4667788899999999 899898885 6899999999877543221 11 112
Q ss_pred --------EEEEEccCCCeEEEEEECC-C-----------------------------------eEEEEEcCC---CCc-
Q 001366 917 --------CCVQFSAHSSHLLAFGSAD-Y-----------------------------------RTYCYDLRN---ARA- 948 (1092)
Q Consensus 917 --------~sl~fsp~~~~~latgs~D-g-----------------------------------~I~vwDlr~---~~~- 948 (1092)
..+.|+|||. .||+++.| . .|++||+.+ ++.
T Consensus 166 ~ee~~~~~~~~~wSpDg~-~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~ 244 (740)
T 4a5s_A 166 EEEVFSAYSALWWSPNGT-FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNA 244 (740)
T ss_dssp HHHTSSSSBCEEECTTSS-EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCC
T ss_pred cchhcCCCcceEECCCCC-EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcc
Confidence 3589999996 66665422 1 588899987 531
Q ss_pred ceEEec------CCCCCeEEEEEcC-CCEEEEEEC----CCeEEEEEcCCCCCCCCCCCceeEEE--cCCCCCeE-----
Q 001366 949 PWCVLA------GHEKAVSYVKFLD-SGTLVTAST----DNKLKLWDLKRTSHTGPSTNACSLTF--SGHTNEKN----- 1010 (1092)
Q Consensus 949 ~~~~l~------~H~~~V~~v~fs~-~~~L~Sgs~----Dg~I~vWDl~~~~~~~~~~~~~~~~l--~~h~~~V~----- 1010 (1092)
....+. +|...+..++|++ ++.++.... +..|.+||+.++.... ....+..+ .+|...+.
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~--~~~~~~~l~~~~~~~~v~~~~~~ 322 (740)
T 4a5s_A 245 TSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRW--NCLVARQHIEMSTTGWVGRFRPS 322 (740)
T ss_dssp CEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEE--EECGGGCEEEECSSSCSSSSSCC
T ss_pred eEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcccc--ceeEEEEeeeccCCceEccCcCC
Confidence 122333 3788899999994 444544332 3479999998542000 00011112 44655554
Q ss_pred EEEEecCCCEEE-EEec-C--CcEEEEeCCCCCc
Q 001366 1011 FVGLSTADGYIA-CGSE-S--NEVYAYHRSLPMP 1040 (1092)
Q Consensus 1011 ~v~~spdg~~la-sgs~-D--g~I~Iwd~~~~~~ 1040 (1092)
.+.|+|||+.|+ ..+. + ..|++|+...+..
T Consensus 323 ~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 323 EPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp CCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred CceEcCCCCEEEEEEEcCCCceEEEEEECCCCce
Confidence 689999999877 6664 3 4688888776543
No 423
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.59 E-value=4e-13 Score=152.17 Aligned_cols=240 Identities=7% Similarity=0.006 Sum_probs=178.1
Q ss_pred CCCeEEEEEecCCCCEEEEEECC------------------------CcEEEEECCCCceEEEee-ccCccEEEEEEecC
Q 001366 828 RSKLSCVCWNNYIKNYLASADYD------------------------GVVKLWDACTGQTVSHYI-EHEKRAWSVDFSQV 882 (1092)
Q Consensus 828 ~~~V~~v~~sp~~~~~LaSgs~D------------------------gtV~IWD~~tg~~i~~l~-~h~~~V~sv~fsp~ 882 (1092)
-..+.+|+++++ ++++++.+.+ ++|.+||..+++.+..+. ++-..+..++++|
T Consensus 23 l~~v~~va~d~~-G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~- 100 (329)
T 3fvz_A 23 PGQVSGVALDSK-NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT- 100 (329)
T ss_dssp CSCEEEEEECTT-CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT-
T ss_pred cCCceEEEECCC-CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC-
Confidence 467899999998 8888888777 479999999998877665 3445789999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCCc-eeeeEec----------CCceEEEEEcc-CCCeEEEEEE-CCCeEEEEEcCCCCcc
Q 001366 883 HPTKLASGSDDCSVKLWNINEKN-SLATIKN----------IANVCCVQFSA-HSSHLLAFGS-ADYRTYCYDLRNARAP 949 (1092)
Q Consensus 883 ~~~~laSgs~Dg~I~iWDl~~~~-~l~~l~~----------~~~V~sl~fsp-~~~~~latgs-~Dg~I~vwDlr~~~~~ 949 (1092)
+++++++.+.++.|++||..... .+..+.. -...+.|+|+| ++ .++++.+ .++.|++||. ++. .
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g-~lyv~d~~~~~~I~~~~~-~g~-~ 177 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG-AVFVSDGYCNSRIVQFSP-SGK-F 177 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC-CEEEEECSSCCEEEEECT-TSC-E
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCC-eEEEEeCCCCCeEEEEcC-CCC-E
Confidence 88899998899999999986542 5555531 23588999999 55 5777776 6999999994 333 2
Q ss_pred eEEecC----------CCCCeEEEEEcC--CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEc--CCCCCeEEEEEe
Q 001366 950 WCVLAG----------HEKAVSYVKFLD--SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFS--GHTNEKNFVGLS 1015 (1092)
Q Consensus 950 ~~~l~~----------H~~~V~~v~fs~--~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~--~h~~~V~~v~~s 1015 (1092)
+..+.. +-..+..|++++ +..+++...++.|++||.. ++..+..+. .+...+..++|+
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~--------~G~~~~~~~~~~~~~~~~~~~~~ 249 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD--------TKEFVREIKHASFGRNVFAISYI 249 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT--------TCCEEEEECCTTTTTCEEEEEEE
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC--------CCcEEEEEeccccCCCcceeeec
Confidence 334422 223488999984 3455666678899999987 345566663 456678899999
Q ss_pred c------CCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEE
Q 001366 1016 T------ADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVL 1089 (1092)
Q Consensus 1016 p------dg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW 1089 (1092)
| +|..+++.+.+..|++|+..+++.+..+.. ...+...+.+|+++|+|.++++...++.|++|
T Consensus 250 pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~-----------~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~ 318 (329)
T 3fvz_A 250 PGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKP-----------VRKHFDMPHDIVASEDGTVYIGDAHTNTVWKF 318 (329)
T ss_dssp TTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECC-----------SSSCCSSEEEEEECTTSEEEEEESSSCCEEEE
T ss_pred CCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcC-----------CCCccCCeeEEEECCCCCEEEEECCCCEEEEE
Confidence 9 333333333456899999998887776531 12345678999999999888888899999999
Q ss_pred Ec
Q 001366 1090 QM 1091 (1092)
Q Consensus 1090 ~l 1091 (1092)
++
T Consensus 319 ~~ 320 (329)
T 3fvz_A 319 TL 320 (329)
T ss_dssp EE
T ss_pred eC
Confidence 85
No 424
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.59 E-value=6.3e-13 Score=150.52 Aligned_cols=241 Identities=9% Similarity=0.042 Sum_probs=178.5
Q ss_pred CCCEEEEEEcCCCCEEEEEeCC------------------------CcEEEEEcCCCCCCCcccccceeeecCCCCeEEE
Q 001366 779 ANVICSISFDRDEDHFAAAGVS------------------------KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCV 834 (1092)
Q Consensus 779 ~~~V~sl~fspdg~~latgg~D------------------------~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v 834 (1092)
-..|.+|+++|+|+++++...+ ++|.+||..+.. . .......+-....++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~---~---~~~~~~~~~~~p~gi 96 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE---I---LQSSGKNLFYLPHGL 96 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC---E---EEEECTTTCSSEEEE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe---E---EeccCCCccCCceEE
Confidence 3568999999999999988877 468999875411 1 001111234578899
Q ss_pred EEecCCCCEEEEEECCCcEEEEECCCCc-eEEEe---------eccCccEEEEEEecCCCCEEEEEe-CCCcEEEEecCC
Q 001366 835 CWNNYIKNYLASADYDGVVKLWDACTGQ-TVSHY---------IEHEKRAWSVDFSQVHPTKLASGS-DDCSVKLWNINE 903 (1092)
Q Consensus 835 ~~sp~~~~~LaSgs~DgtV~IWD~~tg~-~i~~l---------~~h~~~V~sv~fsp~~~~~laSgs-~Dg~I~iWDl~~ 903 (1092)
+++++ ++++++.+.++.|++||..... .+..+ .++-....+|+++|.++.++++.+ .++.|++|| .+
T Consensus 97 a~d~~-g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~ 174 (329)
T 3fvz_A 97 SIDTD-GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PS 174 (329)
T ss_dssp EECTT-SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TT
T ss_pred EECCC-CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CC
Confidence 99997 7788888889999999975442 45555 234456899999986678888886 699999999 56
Q ss_pred CceeeeEecC-----------CceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEe--cCCCCCeEEEEEcCCCE
Q 001366 904 KNSLATIKNI-----------ANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVL--AGHEKAVSYVKFLDSGT 970 (1092)
Q Consensus 904 ~~~l~~l~~~-----------~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l--~~H~~~V~~v~fs~~~~ 970 (1092)
+..+..+... .....++++|++..++++...++.|++||..+++. +..+ ..+...+..++|+++..
T Consensus 175 g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~-~~~~~~~~~~~~~~~~~~~pg~~ 253 (329)
T 3fvz_A 175 GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF-VREIKHASFGRNVFAISYIPGFL 253 (329)
T ss_dssp SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECCTTTTTCEEEEEEETTEE
T ss_pred CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE-EEEEeccccCCCcceeeecCCEE
Confidence 7777766521 23889999999557888888999999999986643 3444 34667788999987333
Q ss_pred EEEEE-------CCCeEEEEEcCCCCCCCCCCCceeEEE---cCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCC
Q 001366 971 LVTAS-------TDNKLKLWDLKRTSHTGPSTNACSLTF---SGHTNEKNFVGLSTADGYIACGSESNEVYAYHRS 1036 (1092)
Q Consensus 971 L~Sgs-------~Dg~I~vWDl~~~~~~~~~~~~~~~~l---~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~ 1036 (1092)
+++.+ .+.+|++||..+ +..+..+ .++......++++|+|.++++...++.|++|+..
T Consensus 254 ~~~~g~~~v~~~~~~~v~~~~~~~--------g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 254 FAVNGKPYFGDQEPVQGFVMNFSS--------GEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEEECCCCTTCSCCCCEEEEETTT--------CCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred EEeCCCEEeccCCCcEEEEEEcCC--------CeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 33332 344899999873 4556666 3677789999999999888888899999999864
No 425
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.58 E-value=3e-13 Score=155.66 Aligned_cols=257 Identities=10% Similarity=0.072 Sum_probs=175.9
Q ss_pred CCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEE----------CCCcEEEEECCCCceEEEee
Q 001366 799 VSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASAD----------YDGVVKLWDACTGQTVSHYI 868 (1092)
Q Consensus 799 ~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs----------~DgtV~IWD~~tg~~i~~l~ 868 (1092)
.|++|.+||..+.. .. .....+..+ .++|+|+ +++|++++ .+++|.+||..+++.+.++.
T Consensus 29 ~d~~v~v~D~~t~~---~~----~~i~~g~~p--~i~~spd-g~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~ 98 (361)
T 2oiz_A 29 TESRVHVYDYTNGK---FL----GMVPTAFNG--HVQVSND-GKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEIS 98 (361)
T ss_dssp GGCEEEEEETTTCC---EE----EEEECCEEE--EEEECTT-SSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEE
T ss_pred ccCeEEEEECCCCe---EE----EEecCCCCC--ceEECCC-CCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEE
Confidence 47799999976521 11 111122333 8999998 77777776 36789999999999888776
Q ss_pred cc------CccEEEEEEecCCCCEEEEEeC--CCcEEEEecCCCceeee-EecCCceEEEEEccCCCeEEEEEECCCeEE
Q 001366 869 EH------EKRAWSVDFSQVHPTKLASGSD--DCSVKLWNINEKNSLAT-IKNIANVCCVQFSAHSSHLLAFGSADYRTY 939 (1092)
Q Consensus 869 ~h------~~~V~sv~fsp~~~~~laSgs~--Dg~I~iWDl~~~~~l~~-l~~~~~V~sl~fsp~~~~~latgs~Dg~I~ 939 (1092)
.. ......++|+| ++++|++++. +++|.+||+.+++.+.+ +..... ..+.+.|++...+++.+.||.+.
T Consensus 99 ~~~~~~~~g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~ 176 (361)
T 2oiz_A 99 LPPKRVQGLNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLL 176 (361)
T ss_dssp ECTTBCCBCCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEE
T ss_pred cCccccccCCCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEE
Confidence 42 34567899999 8888888764 68999999999988887 665432 33667888766888899999999
Q ss_pred EEEcCCCCcceE------EecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcC------CC
Q 001366 940 CYDLRNARAPWC------VLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG------HT 1006 (1092)
Q Consensus 940 vwDlr~~~~~~~------~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~------h~ 1006 (1092)
+|++........ .+..+..++ .+.+. ++..++..+.++.|.+||+.... ......+.- +.
T Consensus 177 ~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~------~~~~~~~~~~~~~~~~~ 249 (361)
T 2oiz_A 177 TINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDE------VKVDGPWSLLNDEDKAK 249 (361)
T ss_dssp EEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSS------CEEEEEEESCCHHHHHT
T ss_pred EEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCC------ceecccccccCcccccc
Confidence 999865322221 112222222 12222 45567777789999999986321 011111110 00
Q ss_pred ----CCeEEEEEecCCCEEEEEec-----------CCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEe
Q 001366 1007 ----NEKNFVGLSTADGYIACGSE-----------SNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWR 1071 (1092)
Q Consensus 1007 ----~~V~~v~~spdg~~lasgs~-----------Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~s 1071 (1092)
.....++|+|+++.+..+.. .+.|.+||..+++.+.++.. +. +.+|+|+
T Consensus 250 ~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~--------------~~--p~~ia~s 313 (361)
T 2oiz_A 250 NWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG--------------RD--ALSMTID 313 (361)
T ss_dssp TCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC--------------TT--CCEEEEE
T ss_pred ccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec--------------CC--eeEEEEC
Confidence 11123789999886665533 35899999999988887753 12 8999999
Q ss_pred CCCCEEEEEecCCeEEEEEc
Q 001366 1072 RRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1072 pd~~~Lasgs~DG~V~vW~l 1091 (1092)
|||++|++++. +.|.|||+
T Consensus 314 pdg~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 314 QQRNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp TTTTEEEEECS-SCEEEEEC
T ss_pred CCCCEEEEeCC-CeEEEEEC
Confidence 99999999987 99999985
No 426
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.55 E-value=4.8e-13 Score=150.74 Aligned_cols=279 Identities=10% Similarity=0.071 Sum_probs=187.6
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECC
Q 001366 780 NVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDAC 859 (1092)
Q Consensus 780 ~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~ 859 (1092)
..|.++.|++++..++..+.++.++.|.-. .......+...+.+++|+++ +.+++++..++.|.+||..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~-g~l~~~~~~~~~i~~~d~~ 74 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITAE----------PWLEISKKGLQLEGLNFDRQ-GQLFLLDVFEGNIFKINPE 74 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEECE----------EEEEEESSCCCEEEEEECTT-SCEEEEETTTCEEEEECTT
T ss_pred cccceeeecCCccceeEEeecccCcccccc----------eeEEEeccCccccCcEECCC-CCEEEEECCCCEEEEEeCC
Confidence 346778899988877777788899999321 11122345567799999997 7788888889999999998
Q ss_pred CCceEEEeeccCccEEEEEEecCCCCEEEEEeCC----CcEEEEecCCCceeeeEe---cCCceEEEEEccCCCeEEEEE
Q 001366 860 TGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDD----CSVKLWNINEKNSLATIK---NIANVCCVQFSAHSSHLLAFG 932 (1092)
Q Consensus 860 tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~D----g~I~iWDl~~~~~l~~l~---~~~~V~sl~fsp~~~~~latg 932 (1092)
+++.......+...+.++++++ ++.+++++..+ +.|.+||..++.....+. ....+.+++++|++. ++++.
T Consensus 75 ~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~ 152 (333)
T 2dg1_A 75 TKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTD 152 (333)
T ss_dssp TCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-EEEEE
T ss_pred CCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-EEEEe
Confidence 8876655445677899999999 78888877766 689999998876543333 235689999999985 55554
Q ss_pred EC------CCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEE-EEECCCeEEEEEcCCCCCCCC-CCCceeEEEc
Q 001366 933 SA------DYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLV-TASTDNKLKLWDLKRTSHTGP-STNACSLTFS 1003 (1092)
Q Consensus 933 s~------Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~-Sgs~Dg~I~vWDl~~~~~~~~-~~~~~~~~l~ 1003 (1092)
.. .+.|+.||..+.+. ..+..+...+..++|+ +++.|+ +.+.++.|.+||+........ ........+.
T Consensus 153 ~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~ 230 (333)
T 2dg1_A 153 FRGYSTNPLGGVYYVSPDFRTV--TPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFT 230 (333)
T ss_dssp CCCBTTBCCEEEEEECTTSCCE--EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECC
T ss_pred ccccccCCCceEEEEeCCCCEE--EEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecC
Confidence 43 35677777654332 2222333457889998 445554 445678999999963110000 0000011122
Q ss_pred CCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecC
Q 001366 1004 GHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSS 1083 (1092)
Q Consensus 1004 ~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~D 1083 (1092)
++ ..+..++++++|.++++...++.|.+|+. .++.+..+... ....+|...+.+++|+|++..|+.++.+
T Consensus 231 ~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~--------~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 231 GH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIP--------GRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp SS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECT--------TGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcC--------CCccccccCcceEEECCCCCEEEEEeCc
Confidence 22 45778999999998888888899999997 45555554321 0011233468899999998777665555
No 427
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.55 E-value=6.8e-13 Score=150.15 Aligned_cols=253 Identities=8% Similarity=-0.019 Sum_probs=169.8
Q ss_pred CEEEEEEcCCCCEEEEEe---------CCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECC-
Q 001366 781 VICSISFDRDEDHFAAAG---------VSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYD- 850 (1092)
Q Consensus 781 ~V~sl~fspdg~~latgg---------~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~D- 850 (1092)
.+...+| ||+++|... .++.|.+|++.... ... . ..+.+++|+|+ ++.|+.++.+
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~--------~~~-l---~~~~~~~~SpD-g~~la~~~~~~ 80 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA--------RRF-I---ENATMPRISPD-GKKIAFMRANE 80 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC--------EEE-E---ESCEEEEECTT-SSEEEEEEEET
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc--------eEE-c---ccCCCeEECCC-CCEEEEEEecc
Confidence 4556677 788777542 25678899886521 011 1 56789999998 7888777654
Q ss_pred --C--cEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCC---------------------------CcEEEE
Q 001366 851 --G--VVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDD---------------------------CSVKLW 899 (1092)
Q Consensus 851 --g--tV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~D---------------------------g~I~iW 899 (1092)
+ .|.+||+.+++...... +.. +.++.|+| +++.|+.++.+ ..|.+|
T Consensus 81 ~~~~~~l~~~~~~~g~~~~l~~-~~~-~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 157 (347)
T 2gop_A 81 EKKVSEIWVADLETLSSKKILE-AKN-IRSLEWNE-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIF 157 (347)
T ss_dssp TTTEEEEEEEETTTTEEEEEEE-ESE-EEEEEECT-TSSEEEEEEECCCC---------CCCC---------CEEEEEEE
T ss_pred CCCcceEEEEECCCCceEEEEc-CCC-ccceeECC-CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEE
Confidence 3 48888988877655444 334 99999999 88888877642 578999
Q ss_pred ecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCC---------eEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCC
Q 001366 900 NINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADY---------RTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSG 969 (1092)
Q Consensus 900 Dl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg---------~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~ 969 (1092)
|+.+++.+..+... .+..++|+|+| +++++..+. .|+++| +++ ...+..+ ..+..+ + +++
T Consensus 158 d~~~~~~~~~l~~~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~~--~~~l~~~-~~~~~~--spdg~ 227 (347)
T 2gop_A 158 DTESEEVIEEFEKP-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DGK--EEKMFEK-VSFYAV--DSDGE 227 (347)
T ss_dssp ETTTTEEEEEEEEE-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TTE--EEEEEEE-ESEEEE--EECSS
T ss_pred ECCCCeEEeeecCC-CcccccCCCCe--EEEEEecccccccccccccEEEeC--CCc--eEEeccC-cceeeE--CCCCC
Confidence 99988764444444 78899999998 666665432 455555 332 2333334 455555 5 677
Q ss_pred EEEEEECC--------CeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEE-EEEecCCCEEEEEecCCcEEEEeCCCCCc
Q 001366 970 TLVTASTD--------NKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNF-VGLSTADGYIACGSESNEVYAYHRSLPMP 1040 (1092)
Q Consensus 970 ~L~Sgs~D--------g~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~-v~~spdg~~lasgs~Dg~I~Iwd~~~~~~ 1040 (1092)
.|+.++.+ ..|.+|| . +.......+|...+.. +.|+ ++ ++++++.++.++|| +..++.
T Consensus 228 ~l~~~~~~~~~~~~~~~~l~~~d-~---------~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~ 294 (347)
T 2gop_A 228 RILLYGKPEKKYMSEHNKLYIYD-G---------KEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI 294 (347)
T ss_dssp CEEEEECCSSSCCCSSCEEEEEC-S---------SCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE
T ss_pred EEEEEEccccCCccccceEEEEC-C---------CceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce
Confidence 78777654 3677787 2 1222223455667776 8999 88 89999999999999 774433
Q ss_pred eeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeE-EEEEc
Q 001366 1041 ITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCI-KVLQM 1091 (1092)
Q Consensus 1041 i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V-~vW~l 1091 (1092)
.... .+...|.+++|+| .++++++.++.. .||.+
T Consensus 295 ~~~~---------------~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 295 KPIA---------------KGRHWIMGFDVDE--IVVYLKETATRLRELFTW 329 (347)
T ss_dssp EEEE---------------CSSSEEEEEEESS--SEEEEEECSSSCCEEEEE
T ss_pred EEEe---------------cCCCeEEeeeeeC--cEEEEEcCCCChHHheEe
Confidence 2211 1245789999999 788888877765 77754
No 428
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.53 E-value=4e-11 Score=131.85 Aligned_cols=278 Identities=6% Similarity=0.005 Sum_probs=190.2
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEE
Q 001366 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVK 854 (1092)
Q Consensus 775 l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~ 854 (1092)
+..+...+.+++++++|.++++...++.|.+||... . .. ..........+.++++.++ +.++++...++.|.
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~-~---~~---~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~ 81 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLDG-K---IT---EYPLPTPDAKVMCLTISSD-GEVWFTENAANKIG 81 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTTC-C---EE---EEECSSTTCCEEEEEECTT-SCEEEEETTTTEEE
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCCC-C---eE---EecCCcccCceeeEEECCC-CCEEEeCCCCCeEE
Confidence 445667899999999999888877688999998652 1 10 0011123467899999987 77777776688999
Q ss_pred EEECCCCceEEEee--ccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe--cCCceEEEEEccCCCeEEE
Q 001366 855 LWDACTGQTVSHYI--EHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK--NIANVCCVQFSAHSSHLLA 930 (1092)
Q Consensus 855 IWD~~tg~~i~~l~--~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~--~~~~V~sl~fsp~~~~~la 930 (1092)
.||.. ++. ..+. .....+.++++.+ ++.++++...++.|.+||. +++...... ....+.++++++++. +++
T Consensus 82 ~~~~~-g~~-~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v 156 (299)
T 2z2n_A 82 RITKK-GII-KEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA-LWF 156 (299)
T ss_dssp EECTT-SCE-EEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC-EEE
T ss_pred EECCC-CcE-EEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC-EEE
Confidence 99976 442 3332 2455789999998 7888888777889999998 554432221 235689999999984 666
Q ss_pred EEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC-CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCe
Q 001366 931 FGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD-SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEK 1009 (1092)
Q Consensus 931 tgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~-~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V 1009 (1092)
+...++.|..||. +++........+...+..+++.+ +..+++...++.|.+||. +.. ........+...+
T Consensus 157 ~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~-------~~~~~~~~~~~~~ 227 (299)
T 2z2n_A 157 TENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE-------ITEFKIPTPNARP 227 (299)
T ss_dssp EETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC-------EEEEECSSTTCCE
T ss_pred EeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc-------EEEEECCCCCCCc
Confidence 6666789999998 54432222334456788999984 454555556789999998 321 1112233455678
Q ss_pred EEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEE
Q 001366 1010 NFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVL 1089 (1092)
Q Consensus 1010 ~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW 1089 (1092)
..++++++|.++++...++.|.+|+. .+. +..+.. ..+...+.++++ +++.++++.+. +.|..+
T Consensus 228 ~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~~~~~~------------~~~~~~~~~i~~-~~g~l~v~~~~-~~l~~~ 291 (299)
T 2z2n_A 228 HAITAGAGIDLWFTEWGANKIGRLTS-NNI-IEEYPI------------QIKSAEPHGICF-DGETIWFAMEC-DKIGKL 291 (299)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEEET-TTE-EEEEEC------------SSSSCCEEEEEE-CSSCEEEEETT-TEEEEE
T ss_pred eeEEECCCCCEEEeccCCceEEEECC-CCc-eEEEeC------------CCCCCccceEEe-cCCCEEEEecC-CcEEEE
Confidence 99999999987777767889999997 332 332221 123456899999 99998887664 455444
Q ss_pred E
Q 001366 1090 Q 1090 (1092)
Q Consensus 1090 ~ 1090 (1092)
+
T Consensus 292 ~ 292 (299)
T 2z2n_A 292 T 292 (299)
T ss_dssp E
T ss_pred E
Confidence 4
No 429
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.52 E-value=3.5e-11 Score=146.31 Aligned_cols=321 Identities=12% Similarity=0.070 Sum_probs=213.7
Q ss_pred eEcCCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCC
Q 001366 750 AFFDGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRS 829 (1092)
Q Consensus 750 ~~~D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~ 829 (1092)
...++++.+++....++...+..+ ..+..+.|+|||+++.+++.|+.|.+||+...... .........
T Consensus 173 ~~~~~~V~viD~~t~~v~~~i~~g------~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~------~v~~i~~G~ 240 (567)
T 1qks_A 173 LRDAGQIALIDGSTYEIKTVLDTG------YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT------TVAEIKIGS 240 (567)
T ss_dssp ETTTTEEEEEETTTCCEEEEEECS------SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC------EEEEEECCS
T ss_pred eCCCCeEEEEECCCCeEEEEEeCC------CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCc------EeEEEecCC
Confidence 346788999998888777766532 24568999999999999999999999998411011 111122233
Q ss_pred CeEEEEEe----cCCCCEEEEE-ECCCcEEEEECCCCceEEEeec----------cCc-cEEEEEEecCCCCEEEEEeCC
Q 001366 830 KLSCVCWN----NYIKNYLASA-DYDGVVKLWDACTGQTVSHYIE----------HEK-RAWSVDFSQVHPTKLASGSDD 893 (1092)
Q Consensus 830 ~V~~v~~s----p~~~~~LaSg-s~DgtV~IWD~~tg~~i~~l~~----------h~~-~V~sv~fsp~~~~~laSgs~D 893 (1092)
....++|+ |+ +++++++ ..+++|.|+|..+.+.+..+.. |.. .+..+.+++.++..+++...+
T Consensus 241 ~P~~ia~s~~~~pD-Gk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~ 319 (567)
T 1qks_A 241 EARSIETSKMEGWE-DKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET 319 (567)
T ss_dssp EEEEEEECCSTTCT-TTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCceeEEccccCCC-CCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCC
Confidence 45789999 57 6665555 4569999999999988877652 222 677888888556677777788
Q ss_pred CcEEEEecCCCcee--eeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEec----CCCCCeEEEEEcC
Q 001366 894 CSVKLWNINEKNSL--ATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLA----GHEKAVSYVKFLD 967 (1092)
Q Consensus 894 g~I~iWDl~~~~~l--~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~----~H~~~V~~v~fs~ 967 (1092)
|.|.++|....+.+ ..+........+.|+|++.+++++...++.|.++|+.+.+....... .|.+.-..+ +++
T Consensus 320 g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p 398 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHP 398 (567)
T ss_dssp TEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EET
T ss_pred CeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECC
Confidence 99999999876433 33445556778999999986667777889999999998764222222 243222222 344
Q ss_pred -CCEEE-EEE-CCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEec-------CCcEEEEeCCC
Q 001366 968 -SGTLV-TAS-TDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSE-------SNEVYAYHRSL 1037 (1092)
Q Consensus 968 -~~~L~-Sgs-~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~-------Dg~I~Iwd~~~ 1037 (1092)
++.++ ++. .+++|.++|....... ....+.+.++......-..+.++|+++++..... .++|.|||+.+
T Consensus 399 ~~g~v~~t~~~g~~~Vsvid~~~~~~~-~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~ 477 (567)
T 1qks_A 399 TFGPVWATSHMGDDSVALIGTDPEGHP-DNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKA 477 (567)
T ss_dssp TTEEEEEEEBSSSSEEEEEECCTTTCT-TTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGG
T ss_pred CCCcEEEeCCCCCCeEEEecCCCCCCc-cccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCc
Confidence 35554 443 4689999999852211 1124566777655444456889999998877652 46999999876
Q ss_pred C-----Cc-eeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEec-----CCeEEEEEc
Q 001366 1038 P-----MP-ITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANS-----SGCIKVLQM 1091 (1092)
Q Consensus 1038 ~-----~~-i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~-----DG~V~vW~l 1091 (1092)
. .. +..+..+.+.. .......+..+.|+|+|..|..+.. ++.|.|+|.
T Consensus 478 ~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~ 536 (567)
T 1qks_A 478 MTGDGSDPEFKTLPIAEWAG------ITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDD 536 (567)
T ss_dssp CCCSSSCCCEEEECHHHHHT------CCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEET
T ss_pred ccccccCCCcEEeccccccc------cCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEEC
Confidence 5 21 12221111000 1122457899999999998877654 688988873
No 430
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.49 E-value=1.9e-12 Score=148.68 Aligned_cols=273 Identities=11% Similarity=0.025 Sum_probs=169.6
Q ss_pred ccCCCCcEEe--Ec-CCe--EEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCC
Q 001366 741 IQNPTDRLGA--FF-DGL--CKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDS 815 (1092)
Q Consensus 741 ~~~~~~~l~~--~~-D~~--~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~ 815 (1092)
.++|++...+ .. ++. +.+|+....+.... ..++...+.++.|+|||+.|+.++.++.|++||+.+..
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~l-----t~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~--- 113 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQL-----TEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLE--- 113 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEEC-----CCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCC---
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEe-----eeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCc---
Confidence 3677775332 23 554 55566555444322 23455455567899999999999999999999987621
Q ss_pred cccccceeeecCCCCeEEEEE--ecCCCCEEEEE----------------------ECCCcEEEEECCCCceEEEeeccC
Q 001366 816 VDVYYPAVEMSNRSKLSCVCW--NNYIKNYLASA----------------------DYDGVVKLWDACTGQTVSHYIEHE 871 (1092)
Q Consensus 816 ~~~~~~~~~~~h~~~V~~v~~--sp~~~~~LaSg----------------------s~DgtV~IWD~~tg~~i~~l~~h~ 871 (1092)
.......+...+....| +++ +.+++.. +.+..|.+||+.+++.. .+..+.
T Consensus 114 ----~~~~~~~~~~~~~~~~~~~~~d-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~ 187 (388)
T 3pe7_A 114 ----ENVVYQVPAEWVGYGTWVANSD-CTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQEN 187 (388)
T ss_dssp ----EEEEEECCTTEEEEEEEEECTT-SSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEES
T ss_pred ----ceeeeechhhcccccceeECCC-CCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE-EeecCC
Confidence 11122233444444444 676 6777642 24578999999988654 444567
Q ss_pred ccEEEEEEecCCCCEEEEEeCC------CcEEEEecCCCceeeeEecC--CceEEEEEccCCCeEEEEEECCC----eEE
Q 001366 872 KRAWSVDFSQVHPTKLASGSDD------CSVKLWNINEKNSLATIKNI--ANVCCVQFSAHSSHLLAFGSADY----RTY 939 (1092)
Q Consensus 872 ~~V~sv~fsp~~~~~laSgs~D------g~I~iWDl~~~~~l~~l~~~--~~V~sl~fsp~~~~~latgs~Dg----~I~ 939 (1092)
..+..+.|+|.++..|+.++.+ ..|.+||+..+.......+. ..+..++|+|+|..+++++..++ .|+
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (388)
T 3pe7_A 188 QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIY 267 (388)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEE
T ss_pred ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEE
Confidence 7789999999556677766653 37888887765443333333 35788999999975544444332 399
Q ss_pred EEEcCCCCc-ceEEecCCCCC---eEEEEEc-CCCEEEEE---------ECCCeEEEEEcCCCCCCCCCCCceeEEEcCC
Q 001366 940 CYDLRNARA-PWCVLAGHEKA---VSYVKFL-DSGTLVTA---------STDNKLKLWDLKRTSHTGPSTNACSLTFSGH 1005 (1092)
Q Consensus 940 vwDlr~~~~-~~~~l~~H~~~---V~~v~fs-~~~~L~Sg---------s~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h 1005 (1092)
+||+.+++. .+..+.++... ...+.|+ ++..|+.. ..+..|.+||+.+. ....+..|
T Consensus 268 ~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~---------~~~~l~~~ 338 (388)
T 3pe7_A 268 SADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG---------TQHRVARH 338 (388)
T ss_dssp EECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTT---------EEEEEEEC
T ss_pred EEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC---------ceEEeccc
Confidence 999988763 22233331100 1112566 55555533 45678999999732 23445555
Q ss_pred CC-----------CeEEEEEecCCCEEEEEe-cCCcEEEEeCC
Q 001366 1006 TN-----------EKNFVGLSTADGYIACGS-ESNEVYAYHRS 1036 (1092)
Q Consensus 1006 ~~-----------~V~~v~~spdg~~lasgs-~Dg~I~Iwd~~ 1036 (1092)
.. .+..++|+|||+.|+.++ .++...||.+.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 339 DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 54 577889999999888766 46777777544
No 431
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.49 E-value=2.7e-11 Score=136.34 Aligned_cols=234 Identities=9% Similarity=-0.013 Sum_probs=161.1
Q ss_pred ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECC----
Q 001366 775 FNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYD---- 850 (1092)
Q Consensus 775 l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~D---- 850 (1092)
+..+...+.+++|+++|++++++..++.|.+||..... .......+...+.+++|+++ +.+++++..+
T Consensus 40 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~-------~~~~~~~~~~~~~~i~~~~d-g~l~v~~~~~~~~~ 111 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE-------IKRPFVSHKANPAAIKIHKD-GRLFVCYLGDFKST 111 (333)
T ss_dssp EESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC-------EEEEEECSSSSEEEEEECTT-SCEEEEECTTSSSC
T ss_pred EeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc-------EEEEeeCCCCCcceEEECCC-CcEEEEeCCCCCCC
Confidence 34566678999999999988888889999999976421 11111234578999999998 7777777666
Q ss_pred CcEEEEECCCCceEEEee--ccCccEEEEEEecCCCCEEEEEeC------CCcEEEEecCCCceeeeEecCCceEEEEEc
Q 001366 851 GVVKLWDACTGQTVSHYI--EHEKRAWSVDFSQVHPTKLASGSD------DCSVKLWNINEKNSLATIKNIANVCCVQFS 922 (1092)
Q Consensus 851 gtV~IWD~~tg~~i~~l~--~h~~~V~sv~fsp~~~~~laSgs~------Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fs 922 (1092)
+.|.+||..++.....+. .+...+.++.++| ++.++++... .+.|..||..+++..........+..++|+
T Consensus 112 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 190 (333)
T 2dg1_A 112 GGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALS 190 (333)
T ss_dssp CEEEEECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEEC
T ss_pred ceEEEEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEEC
Confidence 689999998876553433 2445789999999 7887777654 245666666555444333344568899999
Q ss_pred cCCCeEEEEEECCCeEEEEEcCCCCcceE--------EecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCC
Q 001366 923 AHSSHLLAFGSADYRTYCYDLRNARAPWC--------VLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGP 993 (1092)
Q Consensus 923 p~~~~~latgs~Dg~I~vwDlr~~~~~~~--------~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~ 993 (1092)
|++..++++.+.++.|++||+.+....+. .+.++ ..+..+++. ++..+++...++.|.+||..
T Consensus 191 ~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~------- 262 (333)
T 2dg1_A 191 TDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR------- 262 (333)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT-------
T ss_pred CCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC-------
Confidence 99865566666789999999964211111 11222 467889998 55556666678999999974
Q ss_pred CCCceeEEEcCCC------CCeEEEEEecCCCEEEEEecC
Q 001366 994 STNACSLTFSGHT------NEKNFVGLSTADGYIACGSES 1027 (1092)
Q Consensus 994 ~~~~~~~~l~~h~------~~V~~v~~spdg~~lasgs~D 1027 (1092)
+..+..+..+. ..+.+++|+|+++.|+.++.+
T Consensus 263 --g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 263 --GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp --SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred --CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 23344454333 268899999998777655554
No 432
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.49 E-value=5.7e-15 Score=164.10 Aligned_cols=66 Identities=12% Similarity=-0.025 Sum_probs=58.2
Q ss_pred cccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCCcEEEecccccccc
Q 001366 305 RQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKET 379 (1092)
Q Consensus 305 ~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~~ 379 (1092)
.+|||++|++|.+ +.. .+...++.||+.||.|||++||+||||||+|||++ ++.+||+|||+++..
T Consensus 177 lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~~ 242 (282)
T 1zar_A 177 VLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVEV 242 (282)
T ss_dssp EEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCEET
T ss_pred EEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCeEC
Confidence 3899999999998 421 23567999999999999999999999999999999 999999999988653
No 433
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.47 E-value=5.4e-12 Score=158.25 Aligned_cols=243 Identities=15% Similarity=0.154 Sum_probs=167.9
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCc
Q 001366 778 SANVICSISFDRDEDHFAAAGVSK-----KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV 852 (1092)
Q Consensus 778 h~~~V~sl~fspdg~~latgg~D~-----~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dgt 852 (1092)
|...+.+++|+|||++||.++.++ .|++||+.+... .. .... ...+.+++|+|| ++.|+.++.|+.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~------~~-~~~~-~~~~~~~~wspD-g~~l~~~~~~~~ 193 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKE------LP-DVLE-RVKFSCMAWTHD-GKGMFYNAYPQQ 193 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEE------EE-EEEE-EECSCCEEECTT-SSEEEEEECCCC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC------Cc-cccc-CcccceEEEEeC-CCEEEEEEECCc
Confidence 444688899999999999876544 899999876211 11 1111 123678999998 888888888876
Q ss_pred ----------------EEEEECCCCce--EEEee--ccCccEEEEEEecCCCCEEEEEeC-----CCcEEEEecCC----
Q 001366 853 ----------------VKLWDACTGQT--VSHYI--EHEKRAWSVDFSQVHPTKLASGSD-----DCSVKLWNINE---- 903 (1092)
Q Consensus 853 ----------------V~IWD~~tg~~--i~~l~--~h~~~V~sv~fsp~~~~~laSgs~-----Dg~I~iWDl~~---- 903 (1092)
|++|++.+++. ...+. .|...+.++.|+| +++.|+.++. +..|.+||+.+
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~ 272 (710)
T 2xdw_A 194 DGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNG 272 (710)
T ss_dssp SSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSS
T ss_pred cccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcccccc
Confidence 99999988762 23333 3556678999999 8888877764 67899999987
Q ss_pred --Cc-eeeeEe-cCCceEEEEEccCCCeEEEEEECC---CeEEEEEcCCCCc-ceEEecCCCC--CeEEEEEc-CCCEEE
Q 001366 904 --KN-SLATIK-NIANVCCVQFSAHSSHLLAFGSAD---YRTYCYDLRNARA-PWCVLAGHEK--AVSYVKFL-DSGTLV 972 (1092)
Q Consensus 904 --~~-~l~~l~-~~~~V~sl~fsp~~~~~latgs~D---g~I~vwDlr~~~~-~~~~l~~H~~--~V~~v~fs-~~~~L~ 972 (1092)
+. ....+. +...+.. .|+|+|..+++.+..+ +.|.+||+.++.. .+..+..|.. .+..+.|+ .+..++
T Consensus 273 ~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~ 351 (710)
T 2xdw_A 273 ITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVL 351 (710)
T ss_dssp SCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEE
T ss_pred cCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEE
Confidence 43 344454 3334444 5888887555555433 3799999987642 2344445544 68889998 445667
Q ss_pred EEECCCe--EEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEE-e---cCCcEEEEeCCCCC
Q 001366 973 TASTDNK--LKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACG-S---ESNEVYAYHRSLPM 1039 (1092)
Q Consensus 973 Sgs~Dg~--I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasg-s---~Dg~I~Iwd~~~~~ 1039 (1092)
++..|+. |.+||+. .+.....+..+...+..++++|++..|+.. + ..++|++||+.+++
T Consensus 352 ~~~~~g~~~l~~~~~~--------~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 352 CYLHDVKNTLQLHDLA--------TGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEETTEEEEEEEETT--------TCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEECCEEEEEEEECC--------CCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 7888885 5556664 234556777777778889999998765533 2 34789999998776
No 434
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.47 E-value=1.6e-11 Score=154.06 Aligned_cols=241 Identities=8% Similarity=0.044 Sum_probs=165.7
Q ss_pred CCCCeEEEEEecCCCCEEEEEECCC-----cEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCc------
Q 001366 827 NRSKLSCVCWNNYIKNYLASADYDG-----VVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCS------ 895 (1092)
Q Consensus 827 h~~~V~~v~~sp~~~~~LaSgs~Dg-----tV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~------ 895 (1092)
+...+..++|+|+ +++||.++.++ +|++||+.+++.+.....+ ..+.+++|+| |++.|+.++.|+.
T Consensus 123 ~~~~~~~~~~SPD-g~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 123 GTVALRGYAFSED-GEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTH-DGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp SCEEEEEEEECTT-SSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECT-TSSEEEEEECCCCSSCCSS
T ss_pred CCEEEEEEEECCC-CCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEe-CCCEEEEEEECCccccccc
Confidence 3346889999998 77777665543 8999999999876543322 2367899999 8899998888776
Q ss_pred ----------EEEEecCCCcee--eeEe---cCCceEEEEEccCCCeEEEEEEC-----CCeEEEEEcCC------CCcc
Q 001366 896 ----------VKLWNINEKNSL--ATIK---NIANVCCVQFSAHSSHLLAFGSA-----DYRTYCYDLRN------ARAP 949 (1092)
Q Consensus 896 ----------I~iWDl~~~~~l--~~l~---~~~~V~sl~fsp~~~~~latgs~-----Dg~I~vwDlr~------~~~~ 949 (1092)
|++|++.++... ..+. +...+..+.|+|+|. +|+.++. +..|++||+.+ +...
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGR-YVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC-EEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCC-EEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 999999887632 2223 234578999999997 5554443 57899999986 4323
Q ss_pred eEEecCCCCCeEEEEEcCCCEEEEEECC----CeEEEEEcCCCCCCCCCCCceeEEEcCCCC--CeEEEEEecCCCEEEE
Q 001366 950 WCVLAGHEKAVSYVKFLDSGTLVTASTD----NKLKLWDLKRTSHTGPSTNACSLTFSGHTN--EKNFVGLSTADGYIAC 1023 (1092)
Q Consensus 950 ~~~l~~H~~~V~~v~fs~~~~L~Sgs~D----g~I~vWDl~~~~~~~~~~~~~~~~l~~h~~--~V~~v~~spdg~~las 1023 (1092)
...+..+...+......+++.|+..+.+ +.|.+||+.+... .....+..|.. .+..++|++++.++++
T Consensus 279 ~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~lv~~ 352 (710)
T 2xdw_A 279 WVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE------SKWKVLVPEHEKDVLEWVACVRSNFLVLC 352 (710)
T ss_dssp CEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG------GGCEEEECCCSSCEEEEEEEETTTEEEEE
T ss_pred eEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc------ccceeccCCCCCCeEEEEEEEcCCEEEEE
Confidence 4566667666666433367776655543 3699999874310 12344555544 5778899987778888
Q ss_pred EecCCc--EEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEE-e---cCCeEEEEEc
Q 001366 1024 GSESNE--VYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAA-N---SSGCIKVLQM 1091 (1092)
Q Consensus 1024 gs~Dg~--I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasg-s---~DG~V~vW~l 1091 (1092)
...|+. |++|+...++.+..+. .+...|.+++++|++..|+.. + ..+.|.+|++
T Consensus 353 ~~~~g~~~l~~~~~~~g~~~~~l~--------------~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 353 YLHDVKNTLQLHDLATGALLKIFP--------------LEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp EEETTEEEEEEEETTTCCEEEEEC--------------CCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred EEECCEEEEEEEECCCCCEEEecC--------------CCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 888885 5666765666554443 234568899999998766633 2 2378888885
No 435
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.46 E-value=1.4e-12 Score=163.24 Aligned_cols=246 Identities=9% Similarity=-0.014 Sum_probs=168.9
Q ss_pred CCCCCEEEEEEcCCCCEEE-----EEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCC
Q 001366 777 NSANVICSISFDRDEDHFA-----AAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG 851 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~~la-----tgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dg 851 (1092)
+|...+.+++|+|||++|| .|+.+.+|++||+.+..... .. .. .......++|+|+ ++.|+.++.|.
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-----~~-~~-~~~~~~~~~wspD-g~~l~~~~~d~ 189 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-----VD-VI-EGGKYATPKWTPD-SKGFYYEWLPT 189 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-----SC-CB-SCCTTCCCEECTT-SSEEEEEECCC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-----Cc-cc-CcccccceEEecC-CCEEEEEEecC
Confidence 4566789999999999999 44445789999997632110 00 00 1112267899998 88899998887
Q ss_pred c-------------EEEEECCCCc----eEEEeeccCccEEEEEEecCCCCEEEEEeCCC----cEEEEecCCCceeeeE
Q 001366 852 V-------------VKLWDACTGQ----TVSHYIEHEKRAWSVDFSQVHPTKLASGSDDC----SVKLWNINEKNSLATI 910 (1092)
Q Consensus 852 t-------------V~IWD~~tg~----~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg----~I~iWDl~~~~~l~~l 910 (1092)
. |++|++.+++ .+.....|...+.++.|+| +++.|+.++.++ .|.+||..++......
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~ 268 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKDFRLLV 268 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSSCEEEE
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCceEEee
Confidence 7 9999999876 3333334556789999999 888887777666 6777776655544444
Q ss_pred ecCCceEEEEEccCCCeEEEEEE---CCCeEEEEEcCCCCc-ceEEe-cCC-CCCeEEEEEcCCCEEEEEECCCeEEEEE
Q 001366 911 KNIANVCCVQFSAHSSHLLAFGS---ADYRTYCYDLRNARA-PWCVL-AGH-EKAVSYVKFLDSGTLVTASTDNKLKLWD 984 (1092)
Q Consensus 911 ~~~~~V~sl~fsp~~~~~latgs---~Dg~I~vwDlr~~~~-~~~~l-~~H-~~~V~~v~fs~~~~L~Sgs~Dg~I~vWD 984 (1092)
.+...+....| +++. +++.+. .++.|.+||+.++.. .+..+ ..+ ...+..++|+++..+++...|+..+||.
T Consensus 269 ~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~ 346 (695)
T 2bkl_A 269 KGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRV 346 (695)
T ss_dssp ECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred cCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEE
Confidence 45555666666 6775 555554 358999999987642 12333 333 4568888888777788899999999887
Q ss_pred cCCCCCCCCCCCceeEEEcCC-CCCeEEEEEecCCCEEEEEe----cCCcEEEEeCCCCCc
Q 001366 985 LKRTSHTGPSTNACSLTFSGH-TNEKNFVGLSTADGYIACGS----ESNEVYAYHRSLPMP 1040 (1092)
Q Consensus 985 l~~~~~~~~~~~~~~~~l~~h-~~~V~~v~~spdg~~lasgs----~Dg~I~Iwd~~~~~~ 1040 (1092)
+.. .+.....+..+ ...+..++++|++..|+... ..++|++||+.+++.
T Consensus 347 ~~~-------~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 347 ATL-------KGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EET-------TCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EeC-------CCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 752 12344555544 55677788999988666322 347899999987763
No 436
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.46 E-value=1e-11 Score=140.41 Aligned_cols=223 Identities=9% Similarity=0.084 Sum_probs=148.5
Q ss_pred CCEEEEEEcCCCCEEEEEeCC---Cc--EEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECC----
Q 001366 780 NVICSISFDRDEDHFAAAGVS---KK--IKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYD---- 850 (1092)
Q Consensus 780 ~~V~sl~fspdg~~latgg~D---~~--I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~D---- 850 (1092)
..+.+++|+|||++||.++.+ +. |.+|++.... ......+.. +.+++|+|+ ++.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~--------~~~l~~~~~-~~~~~wspd-g~~l~~~~~~~~~~ 128 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS--------SKKILEAKN-IRSLEWNED-SRKLLIVGFKRRED 128 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE--------EEEEEEESE-EEEEEECTT-SSEEEEEEECCCC-
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc--------eEEEEcCCC-ccceeECCC-CCEEEEEEccCCCc
Confidence 357789999999999988754 34 6666665311 111111223 899999998 7777777642
Q ss_pred -----------------------CcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCC-------cEEEEe
Q 001366 851 -----------------------GVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDC-------SVKLWN 900 (1092)
Q Consensus 851 -----------------------gtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg-------~I~iWD 900 (1092)
..|.+||+.+++.+..+.. . .+..+.|+| ++ ++++++.+. ...||.
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~ 204 (347)
T 2gop_A 129 EDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYI 204 (347)
T ss_dssp --------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEE
T ss_pred CCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCC-Ce-EEEEEecccccccccccccEEE
Confidence 5799999998877555555 4 788999999 77 887776652 445555
Q ss_pred cCCCceeeeEecCCceEEEEEccCCCeEEEEEECC--------CeEEEEEcCCCCcceEEecCCCCCeEE-EEEcCCCEE
Q 001366 901 INEKNSLATIKNIANVCCVQFSAHSSHLLAFGSAD--------YRTYCYDLRNARAPWCVLAGHEKAVSY-VKFLDSGTL 971 (1092)
Q Consensus 901 l~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~D--------g~I~vwDlr~~~~~~~~l~~H~~~V~~-v~fs~~~~L 971 (1092)
+.+++......+ ..+.++ +|+|. .|++++.+ ..|++|| +++ ......+|...+.. +.|+ ++.+
T Consensus 205 ~d~~~~~~l~~~-~~~~~~--spdg~-~l~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~~~~~~~~~~~~s-dg~~ 276 (347)
T 2gop_A 205 WEDGKEEKMFEK-VSFYAV--DSDGE-RILLYGKPEKKYMSEHNKLYIYD--GKE-VMGILDEVDRGVGQAKIKD-GKVY 276 (347)
T ss_dssp EETTEEEEEEEE-ESEEEE--EECSS-CEEEEECCSSSCCCSSCEEEEEC--SSC-EEESSTTCCSEEEEEEEET-TEEE
T ss_pred eCCCceEEeccC-cceeeE--CCCCC-EEEEEEccccCCccccceEEEEC--CCc-eEeccccCCcccCCccEEc-CcEE
Confidence 544443332333 444444 89997 45555433 4788888 332 23334556777886 8998 4488
Q ss_pred EEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcE-EEEeCC
Q 001366 972 VTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEV-YAYHRS 1036 (1092)
Q Consensus 972 ~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I-~Iwd~~ 1036 (1092)
++++.++.++|| +.+ +.. ..+..+...|.+++|+| .++++++.++.. .||...
T Consensus 277 ~~~~~~~~~~l~-~~~--------g~~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 277 FTLFEEGSVNLY-IWD--------GEI-KPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEETTEEEEE-EES--------SSE-EEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred EEEecCCcEEEE-EcC--------Cce-EEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 899999999999 872 222 33444577889999999 677777766654 666654
No 437
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.46 E-value=1.9e-11 Score=135.49 Aligned_cols=234 Identities=9% Similarity=-0.018 Sum_probs=164.0
Q ss_pred CCCCEEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEE
Q 001366 778 SANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLW 856 (1092)
Q Consensus 778 h~~~V~sl~fspdg~-~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IW 856 (1092)
+.....+++|+|+|+ +++++..++.|.+|+.... ......+...+.+++++++ +.++++...++.|.+|
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~l~~~~d-g~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ---------LSPEMHPSHHQNGHCLNKQ-GHLIACSHGLRRLERQ 95 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC---------EEEEESSCSSEEEEEECTT-CCEEEEETTTTEEEEE
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC---------eEEEECCCCCcceeeECCC-CcEEEEecCCCeEEEE
Confidence 445677899999998 7888888999999998651 1122235677899999997 7787777677899999
Q ss_pred ECCCCceEEEeecc----CccEEEEEEecCCCCEEEEEeC-----------------CCcEEEEecCCCceeeeEecCCc
Q 001366 857 DACTGQTVSHYIEH----EKRAWSVDFSQVHPTKLASGSD-----------------DCSVKLWNINEKNSLATIKNIAN 915 (1092)
Q Consensus 857 D~~tg~~i~~l~~h----~~~V~sv~fsp~~~~~laSgs~-----------------Dg~I~iWDl~~~~~l~~l~~~~~ 915 (1092)
|..+++........ ...+.+++++| ++.++++.+. .+.|..+|.. ++..........
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~ 173 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVK 173 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSS
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCC
Confidence 99888754433221 23467899999 8888887321 2345555554 443333345566
Q ss_pred eEEEEEccCCCeEEEEEECCCeEEEEEcC-CCCc--ceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCC
Q 001366 916 VCCVQFSAHSSHLLAFGSADYRTYCYDLR-NARA--PWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTG 992 (1092)
Q Consensus 916 V~sl~fsp~~~~~latgs~Dg~I~vwDlr-~~~~--~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~ 992 (1092)
...++|+|++. ++++.+.++.|++||+. ++.. ....+..+...+..+++.+.+.|+.+. ++.|.+||..
T Consensus 174 ~~gi~~s~dg~-~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~------ 245 (296)
T 3e5z_A 174 PNGLAFLPSGN-LLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD------ 245 (296)
T ss_dssp EEEEEECTTSC-EEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT------
T ss_pred CccEEECCCCC-EEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC------
Confidence 78999999997 45888888999999997 3321 012334455667789998555555555 8899999975
Q ss_pred CCCCceeEEEcCCCCCeEEEEE-ecCCCEEEEEecCCcEEEEeCC
Q 001366 993 PSTNACSLTFSGHTNEKNFVGL-STADGYIACGSESNEVYAYHRS 1036 (1092)
Q Consensus 993 ~~~~~~~~~l~~h~~~V~~v~~-spdg~~lasgs~Dg~I~Iwd~~ 1036 (1092)
+..+..+..+.. +++++| +|+++.|+.++.++ +..++..
T Consensus 246 ---g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~ 285 (296)
T 3e5z_A 246 ---GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETN 285 (296)
T ss_dssp ---SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECS
T ss_pred ---CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcc
Confidence 345667777776 899999 58888888888764 4445544
No 438
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.45 E-value=3.5e-12 Score=158.08 Aligned_cols=251 Identities=8% Similarity=-0.056 Sum_probs=168.3
Q ss_pred ecCCCCeEEEEEecCCCCEEEEE--ECCCcEEEEECCCCceEEEeeccCccEE---------EEEEe--cCCCCE-EEEE
Q 001366 825 MSNRSKLSCVCWNNYIKNYLASA--DYDGVVKLWDACTGQTVSHYIEHEKRAW---------SVDFS--QVHPTK-LASG 890 (1092)
Q Consensus 825 ~~h~~~V~~v~~sp~~~~~LaSg--s~DgtV~IWD~~tg~~i~~l~~h~~~V~---------sv~fs--p~~~~~-laSg 890 (1092)
.+|...|..++|+++ .-++++. +.++...||....+.....+..|...+. .+.|+ | +++. |+.+
T Consensus 20 ~~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SP-Dg~~~la~~ 97 (662)
T 3azo_A 20 ASRSGRPACVGAVGD-EVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRP-AGGPLLVFT 97 (662)
T ss_dssp HHTCSCCEEEEEETT-EEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCS-SSSCEEEEE
T ss_pred hhcCCccceeEEcCC-eEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeec-CCCeEEEEE
Confidence 457888999999986 5555665 5588999999655666677777776666 66676 8 7776 6655
Q ss_pred eC-CCcEEEEecC--C-CceeeeEe------cCCceEEEEEccCCCeEEEEEECC----------CeEEEEEcCCCC---
Q 001366 891 SD-DCSVKLWNIN--E-KNSLATIK------NIANVCCVQFSAHSSHLLAFGSAD----------YRTYCYDLRNAR--- 947 (1092)
Q Consensus 891 s~-Dg~I~iWDl~--~-~~~l~~l~------~~~~V~sl~fsp~~~~~latgs~D----------g~I~vwDlr~~~--- 947 (1092)
+. +..|.+|++. . +. ...+. +...+.+++|+|+|. .|++++.+ ..|++||+.+..
T Consensus 98 ~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~-~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERG-EVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp BTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTT-EEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred ECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCC-EEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 44 5667777765 2 33 33333 245688999999996 67666666 589999998720
Q ss_pred -cceEEec-CCCCCeEEEEEc-CCCEEEEEECC--------CeEEEEEcCC-CCCCCCCCCceeEEEcCCCCCeEEEEEe
Q 001366 948 -APWCVLA-GHEKAVSYVKFL-DSGTLVTASTD--------NKLKLWDLKR-TSHTGPSTNACSLTFSGHTNEKNFVGLS 1015 (1092)
Q Consensus 948 -~~~~~l~-~H~~~V~~v~fs-~~~~L~Sgs~D--------g~I~vWDl~~-~~~~~~~~~~~~~~l~~h~~~V~~v~~s 1015 (1092)
.....+. .+...+..++|+ ++++|+.++.+ ..|.+||+.. +. .........+|...+..++|+
T Consensus 176 ~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~-----~~~~~~l~~~~~~~~~~~~~s 250 (662)
T 3azo_A 176 RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR-----FADTRTLLGGPEEAIAQAEWA 250 (662)
T ss_dssp GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC-----EEEEEEEEEETTBCEEEEEEC
T ss_pred CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc-----ccccEEeCCCCCceEcceEEC
Confidence 1234555 566778889999 66788877755 3799999972 20 012333334567789999999
Q ss_pred cCCCEEEEEecCC--cEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1016 TADGYIACGSESN--EVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1016 pdg~~lasgs~Dg--~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
|||+++++++.++ .|++|+...++...... +... .. ...-...+.+++|+|++.++++++. |.++||.+
T Consensus 251 pdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~-~~~~-~~----~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 251 PDGSLIVATDRTGWWNLHRVDPATGAATQLCR-REEE-FA----GPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGIL 321 (662)
T ss_dssp TTSCEEEEECTTSSCEEEEECTTTCCEEESSC-CSSB-SS----CCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEE
T ss_pred CCCeEEEEECCCCCeEEEEEECCCCceeeccc-cccc-cc----CccccccCceEeEeCCCEEEEEEEc-CccEEEEE
Confidence 9999888888888 66666665554332211 0000 00 0000111467899999999999999 99999953
No 439
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.45 E-value=3e-11 Score=133.89 Aligned_cols=229 Identities=9% Similarity=0.026 Sum_probs=166.7
Q ss_pred cCCCCeEEEEEecCCCC-EEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCC
Q 001366 826 SNRSKLSCVCWNNYIKN-YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEK 904 (1092)
Q Consensus 826 ~h~~~V~~v~~sp~~~~-~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~ 904 (1092)
.+.....+++|+|+ ++ +++++..++.|..||..++ ...+..+...+.++++++ ++.++++...++.|.+||..++
T Consensus 25 ~~~~~~eg~~~d~~-g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~g 100 (296)
T 3e5z_A 25 DGFTWTEGPVYVPA-RSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQREPGG 100 (296)
T ss_dssp CCCSSEEEEEEEGG-GTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECSTTC
T ss_pred cCCccccCCeEeCC-CCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcCCCC
Confidence 34566789999998 55 8888889999999999877 667777778899999999 8888887777889999999888
Q ss_pred ceeeeEec-----CCceEEEEEccCCCeEEEE----EE-------------CCCeEEEEEcCCCCcceEEecCCCCCeEE
Q 001366 905 NSLATIKN-----IANVCCVQFSAHSSHLLAF----GS-------------ADYRTYCYDLRNARAPWCVLAGHEKAVSY 962 (1092)
Q Consensus 905 ~~l~~l~~-----~~~V~sl~fsp~~~~~lat----gs-------------~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~ 962 (1092)
+....... ...++.++++|+|. ++++ |+ ..+.|+.+|.. ++ +..+..+...+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~--~~~~~~~~~~~~g 176 (296)
T 3e5z_A 101 EWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT--LSAPIRDRVKPNG 176 (296)
T ss_dssp CEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC--EEEEECCCSSEEE
T ss_pred cEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CC--EEEeecCCCCCcc
Confidence 75443321 23467899999995 6665 32 13467777655 22 3444566677899
Q ss_pred EEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCce---eEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCC
Q 001366 963 VKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNAC---SLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLP 1038 (1092)
Q Consensus 963 v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~---~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~ 1038 (1092)
++|+ +++.|++.+.++.|.+||+... +.. ...+..+...+..++++++|.++++. ++.|.+|+.. +
T Consensus 177 i~~s~dg~~lv~~~~~~~i~~~~~~~~-------g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g 246 (296)
T 3e5z_A 177 LAFLPSGNLLVSDTGDNATHRYCLNAR-------GETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-G 246 (296)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECSS-------SCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-S
T ss_pred EEECCCCCEEEEeCCCCeEEEEEECCC-------CcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-C
Confidence 9998 5666777777899999998621 111 22333345566789999999977766 7889999976 6
Q ss_pred CceeeeeccccCCCCCccccCCCCCCEEEEEE-eCCCCEEEEEecCCeEE
Q 001366 1039 MPITSYKFGSIDPISGKETDDDNGLFVSSVCW-RRRSDMVVAANSSGCIK 1087 (1092)
Q Consensus 1039 ~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~-spd~~~Lasgs~DG~V~ 1087 (1092)
+.+..+.. +.. +.+++| .|++..|++++.+|.++
T Consensus 247 ~~~~~~~~--------------~~~-~~~~~f~~~d~~~L~v~t~~~l~~ 281 (296)
T 3e5z_A 247 DELGRVLT--------------PQT-TSNLCFGGPEGRTLYMTVSTEFWS 281 (296)
T ss_dssp CEEEEEEC--------------SSC-CCEEEEESTTSCEEEEEETTEEEE
T ss_pred CEEEEEEC--------------CCC-ceeEEEECCCCCEEEEEcCCeEEE
Confidence 65554431 233 889999 58999999888775443
No 440
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.42 E-value=3.3e-11 Score=133.19 Aligned_cols=215 Identities=8% Similarity=-0.013 Sum_probs=165.7
Q ss_pred CCEEEEEECCCcEEEEECCCCceEEEeeccC-ccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecC--CceE
Q 001366 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHE-KRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNI--ANVC 917 (1092)
Q Consensus 841 ~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~-~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~--~~V~ 917 (1092)
+++|++++.|+.|++||..+|+.+.++..+. ..+.++.+.| ++++++ +.++.|..||. +++.+..+... ..+.
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~p-dG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATK-AGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECT-TSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECC-CCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 6899999999999999999999999998776 4688999999 888888 45788999999 89999998854 4788
Q ss_pred EEEEccCCCeEEEEEEC-CCeEEEEEcCCCCcceEEec------CCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCC
Q 001366 918 CVQFSAHSSHLLAFGSA-DYRTYCYDLRNARAPWCVLA------GHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTS 989 (1092)
Q Consensus 918 sl~fsp~~~~~latgs~-Dg~I~vwDlr~~~~~~~~l~------~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~ 989 (1092)
++.+.|+|. ++++.+. ++.|..+|. +++.. ..+. ++......+++. +++++++.+.++.|.+||..
T Consensus 81 ~~~~~~dG~-~lv~~~~~~~~v~~vd~-~Gk~l-~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~--- 154 (276)
T 3no2_A 81 TARILPDGN-ALVAWCGHPSTILEVNM-KGEVL-SKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN--- 154 (276)
T ss_dssp EEEECTTSC-EEEEEESTTEEEEEECT-TSCEE-EEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT---
T ss_pred ccEECCCCC-EEEEecCCCCEEEEEeC-CCCEE-EEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC---
Confidence 999999996 7777776 788888886 44432 2221 122234455565 77889999999999999976
Q ss_pred CCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEE
Q 001366 990 HTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVC 1069 (1092)
Q Consensus 990 ~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva 1069 (1092)
++.+.++... ....++.+.++|.++++++.++.|..||..+++.+..+.-... . ...-..+.+++
T Consensus 155 ------G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~---~-----~~~l~~~~~~~ 219 (276)
T 3no2_A 155 ------GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDI---E-----GVQLFFVAQLF 219 (276)
T ss_dssp ------SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGS---B-----SCCCSEEEEEE
T ss_pred ------CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCC---C-----Cccccccccce
Confidence 4456666654 3456788899999999999888999999999999988752110 0 11224578888
Q ss_pred EeCCCCEEEEE
Q 001366 1070 WRRRSDMVVAA 1080 (1092)
Q Consensus 1070 ~spd~~~Lasg 1080 (1092)
..++|.++++.
T Consensus 220 ~~~~G~i~v~~ 230 (276)
T 3no2_A 220 PLQNGGLYICN 230 (276)
T ss_dssp ECTTSCEEEEE
T ss_pred EcCCCCEEEEe
Confidence 89999988877
No 441
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.40 E-value=7e-11 Score=133.74 Aligned_cols=261 Identities=9% Similarity=-0.032 Sum_probs=174.6
Q ss_pred CCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEE
Q 001366 800 SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDF 879 (1092)
Q Consensus 800 D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~f 879 (1092)
+++|.+||..+...... ...............++++.. +.++++...+++|.+||..+++.+.++. .......+++
T Consensus 16 ~~~l~~~d~~t~~~~~~-i~~~~n~~~lg~~~~~i~~~~--~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~ 91 (328)
T 3dsm_A 16 NATLSYYDPATCEVENE-VFYRANGFKLGDVAQSMVIRD--GIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHF 91 (328)
T ss_dssp CBEEEEEETTTTEEECS-HHHHHHSSCCBSCEEEEEEET--TEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEE
T ss_pred CceEEEEECCCCEEhhh-hHhhhcCcccCccceEEEEEC--CEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEE
Confidence 78999999875211000 000000001123456777754 5666777778999999999999988885 3466889999
Q ss_pred ecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCC------ceEEEEEccCCCeEEEEEE-CCCeEEEEEcCCCCcceEE
Q 001366 880 SQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIA------NVCCVQFSAHSSHLLAFGS-ADYRTYCYDLRNARAPWCV 952 (1092)
Q Consensus 880 sp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~------~V~sl~fsp~~~~~latgs-~Dg~I~vwDlr~~~~~~~~ 952 (1092)
++ ++.++++...++.|.+||..+++....+.... ....+++ . +..++++.. .++.|.+||+.+.+. ...
T Consensus 92 ~~-~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~-~~~ 167 (328)
T 3dsm_A 92 LS-DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKV-VDE 167 (328)
T ss_dssp EE-TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEE-EEE
T ss_pred eC-CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeE-EEE
Confidence 88 66555555589999999999998888887554 6677787 3 444555544 489999999998753 333
Q ss_pred ecCCCCCeEEEEEcCCCEE-EEEECC----------CeEEEEEcCCCCCCCCCCCceeEEEcCC-CCCeEEEEEecCCCE
Q 001366 953 LAGHEKAVSYVKFLDSGTL-VTASTD----------NKLKLWDLKRTSHTGPSTNACSLTFSGH-TNEKNFVGLSTADGY 1020 (1092)
Q Consensus 953 l~~H~~~V~~v~fs~~~~L-~Sgs~D----------g~I~vWDl~~~~~~~~~~~~~~~~l~~h-~~~V~~v~~spdg~~ 1020 (1092)
+.. ......+.+++++.+ +++..+ +.|.+||..+ ......+... ....+.++|+|++++
T Consensus 168 i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t--------~~v~~~~~~~~g~~p~~la~~~d~~~ 238 (328)
T 3dsm_A 168 LTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET--------FTVEKQFKFKLGDWPSEVQLNGTRDT 238 (328)
T ss_dssp EEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT--------TEEEEEEECCTTCCCEEEEECTTSCE
T ss_pred EEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC--------CeEEEEEecCCCCCceeEEEecCCCE
Confidence 332 233567888854444 444443 7899999873 3444444322 236789999999998
Q ss_pred EEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeC-CCCEEEEE----ecCCeEEEEEc
Q 001366 1021 IACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRR-RSDMVVAA----NSSGCIKVLQM 1091 (1092)
Q Consensus 1021 lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~sp-d~~~Lasg----s~DG~V~vW~l 1091 (1092)
|.++.. .|++||..+++.... .+ ...+.....+++++| ++.++++. ..+|.|.+|+.
T Consensus 239 lyv~~~--~v~~~d~~t~~~~~~-~~-----------~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 239 LYWINN--DIWRMPVEADRVPVR-PF-----------LEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp EEEESS--SEEEEETTCSSCCSS-CS-----------BCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred EEEEcc--EEEEEECCCCceeee-ee-----------ecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 877654 899999887764321 10 111245689999999 56666666 57899999974
No 442
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.40 E-value=2.6e-11 Score=131.84 Aligned_cols=238 Identities=7% Similarity=-0.019 Sum_probs=163.7
Q ss_pred CEEEEEEcCCCCEEE-EEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECC
Q 001366 781 VICSISFDRDEDHFA-AAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDAC 859 (1092)
Q Consensus 781 ~V~sl~fspdg~~la-tgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~ 859 (1092)
...+++++++|++++ +.+.++.|.+|+...... ......+...+.++++.++ +.++++.. ++.|.+||..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~p~~i~~~~~-g~l~v~~~-~~~i~~~d~~ 95 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT-------TVLPFNGLYQPQGLAVDGA-GTVYVTDF-NNRVVTLAAG 95 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC------------EECCCCSCCSCCCEEECTT-CCEEEEET-TTEEEEECTT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCccc-------ceEeeCCcCCcceeEECCC-CCEEEEcC-CCEEEEEeCC
Confidence 567899999999877 546788999998654110 0011123356788999987 66666555 8999999987
Q ss_pred CCceEEEee-ccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe-cCCceEEEEEccCCCeEEEEEECCCe
Q 001366 860 TGQTVSHYI-EHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK-NIANVCCVQFSAHSSHLLAFGSADYR 937 (1092)
Q Consensus 860 tg~~i~~l~-~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~-~~~~V~sl~fsp~~~~~latgs~Dg~ 937 (1092)
..... .+. .....+.++++.+ ++.++++...++.|.+||..+........ ....+.++++++++. ++++...++.
T Consensus 96 ~~~~~-~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~ 172 (270)
T 1rwi_B 96 SNNQT-VLPFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTDTDNNR 172 (270)
T ss_dssp CSCCE-ECCCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EEEEEGGGTE
T ss_pred CceEe-eeecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-EEEEECCCCE
Confidence 65433 332 2335688999999 78888887788999999876554332222 234678899999985 7777777889
Q ss_pred EEEEEcCCCCcceEEecCCCCCeEEEEEcC-CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEec
Q 001366 938 TYCYDLRNARAPWCVLAGHEKAVSYVKFLD-SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLST 1016 (1092)
Q Consensus 938 I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~-~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~sp 1016 (1092)
|.+||...... ......+...+..|++.+ +..+++...++.|.+||.... ........+...+.++++++
T Consensus 173 i~~~~~~~~~~-~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~--------~~~~~~~~~~~~p~~i~~~~ 243 (270)
T 1rwi_B 173 VVKLEAESNNQ-VVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST--------TSTVLPFTGLNTPLAVAVDS 243 (270)
T ss_dssp EEEECTTTCCE-EECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS--------CCEECCCCSCSCEEEEEECT
T ss_pred EEEEecCCCce-EeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC--------cceeeccCCCCCceeEEECC
Confidence 99999876542 122223336788999984 445555556889999998632 11111123345688999999
Q ss_pred CCCEEEEEecCCcEEEEeCCCCC
Q 001366 1017 ADGYIACGSESNEVYAYHRSLPM 1039 (1092)
Q Consensus 1017 dg~~lasgs~Dg~I~Iwd~~~~~ 1039 (1092)
+|.++++.+.++.|++|+....+
T Consensus 244 ~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 244 DRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp TCCEEEEEGGGTEEEEECCCGGG
T ss_pred CCCEEEEECCCCEEEEEcCCCcc
Confidence 99988999999999999876443
No 443
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.39 E-value=8.5e-11 Score=133.07 Aligned_cols=272 Identities=8% Similarity=-0.031 Sum_probs=183.7
Q ss_pred CCeEEEEEcccceEEeeEEee-eecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCe
Q 001366 753 DGLCKYARYSKFEVQGMLRTG-EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKL 831 (1092)
Q Consensus 753 D~~~k~w~~~~~~~~~~l~~~-~l~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V 831 (1092)
++++.+++....++...+... .-.........+.++ ++.++++...++.|.+||..+.. ....+......
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~--------~~~~i~~~~~p 86 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFK--------EVGRITGFTSP 86 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCC--------EEEEEECCSSE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccE--------EEEEcCCCCCC
Confidence 567788887766654432110 001122456778775 45566666678999999987521 11111234668
Q ss_pred EEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccC-----ccEEEEEEecCCCCEEEEEe-CCCcEEEEecCCCc
Q 001366 832 SCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHE-----KRAWSVDFSQVHPTKLASGS-DDCSVKLWNINEKN 905 (1092)
Q Consensus 832 ~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~-----~~V~sv~fsp~~~~~laSgs-~Dg~I~iWDl~~~~ 905 (1092)
..++++++ +.++++...++.|.+||..+++....+.... .....+++ . ++.++++.. .+++|.+||+.+++
T Consensus 87 ~~i~~~~~-g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~ 163 (328)
T 3dsm_A 87 RYIHFLSD-EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDK 163 (328)
T ss_dssp EEEEEEET-TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTE
T ss_pred cEEEEeCC-CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCe
Confidence 89999887 5555555489999999999998877766433 14557777 3 455555544 48999999999999
Q ss_pred eeeeEecCCceEEEEEccCCCeEEEEEECC----------CeEEEEEcCCCCcceEEecC-CCCCeEEEEEc-CCCEEEE
Q 001366 906 SLATIKNIANVCCVQFSAHSSHLLAFGSAD----------YRTYCYDLRNARAPWCVLAG-HEKAVSYVKFL-DSGTLVT 973 (1092)
Q Consensus 906 ~l~~l~~~~~V~sl~fsp~~~~~latgs~D----------g~I~vwDlr~~~~~~~~l~~-H~~~V~~v~fs-~~~~L~S 973 (1092)
.+.++........+.++|+|. +++++..+ +.|.+||..+.+. ...+.- ....+..++|+ +++.|+.
T Consensus 164 ~~~~i~~g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v-~~~~~~~~g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 164 VVDELTIGIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFTV-EKQFKFKLGDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp EEEEEECSSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEE-EEEEECCTTCCCEEEEECTTSCEEEE
T ss_pred EEEEEEcCCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCeE-EEEEecCCCCCceeEEEecCCCEEEE
Confidence 888888766778899999985 55555444 7899999987653 333322 12468899999 5777777
Q ss_pred EECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEec-CCCEEEEE----ecCCcEEEEeCCCCCceeeeecc
Q 001366 974 ASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLST-ADGYIACG----SESNEVYAYHRSLPMPITSYKFG 1047 (1092)
Q Consensus 974 gs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~sp-dg~~lasg----s~Dg~I~Iwd~~~~~~i~~~~~~ 1047 (1092)
+.. .|.+||..+..... . ..+..+......++++| ++.++++. ..++.|.+|+.. ++.+.++..|
T Consensus 242 ~~~--~v~~~d~~t~~~~~----~--~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G 311 (328)
T 3dsm_A 242 INN--DIWRMPVEADRVPV----R--PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVG 311 (328)
T ss_dssp ESS--SEEEEETTCSSCCS----S--CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEE
T ss_pred Ecc--EEEEEECCCCceee----e--eeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEec
Confidence 654 89999997543210 0 01111235678899999 46666666 678999999988 8888888753
No 444
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.39 E-value=5.4e-11 Score=129.30 Aligned_cols=234 Identities=9% Similarity=-0.025 Sum_probs=161.5
Q ss_pred CeEEEEEecCCCCEEE-EEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceee
Q 001366 830 KLSCVCWNNYIKNYLA-SADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLA 908 (1092)
Q Consensus 830 ~V~~v~~sp~~~~~La-Sgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~ 908 (1092)
...+++++++ +.+++ +.+.++.|.+||..++........+...+.++++.+ ++.++++.. ++.|.+||.......
T Consensus 25 ~p~~i~~~~~-g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~~~- 100 (270)
T 1rwi_B 25 SPSGVAVDSA-GNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNNQT- 100 (270)
T ss_dssp CEEEEEECTT-CCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSCCE-
T ss_pred CccceEECCC-CCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCceEe-
Confidence 6788999997 67777 547789999999765543222223335678999998 777666665 889999998765432
Q ss_pred eEe--cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEc
Q 001366 909 TIK--NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDL 985 (1092)
Q Consensus 909 ~l~--~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl 985 (1092)
.+. ....+.+++++|++. ++++...++.|.+||..+.... .........+..+++. ++..+++...++.|.+||.
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQT-VLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSCE-ECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECT
T ss_pred eeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCceeE-eeccccCCCceeEEEeCCCCEEEEECCCCEEEEEec
Confidence 332 235789999999985 7777777889999986654321 1122333467889998 4555555556789999998
Q ss_pred CCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCE
Q 001366 986 KRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFV 1065 (1092)
Q Consensus 986 ~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V 1065 (1092)
... ........+...+..++++++|.++++...++.|.+|+........ .. ..+...+
T Consensus 179 ~~~--------~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~-------------~~~~~~p 236 (270)
T 1rwi_B 179 ESN--------NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LP-------------FTGLNTP 236 (270)
T ss_dssp TTC--------CEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CC-------------CCSCSCE
T ss_pred CCC--------ceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-ec-------------cCCCCCc
Confidence 732 1111122333668899999999888888788999999876443221 11 1123468
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1066 SSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1066 ~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.++++++++.++++...++.|++|++
T Consensus 237 ~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 237 LAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp EEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred eeEEECCCCCEEEEECCCCEEEEEcC
Confidence 99999999999999999999999975
No 445
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.39 E-value=1.5e-11 Score=153.98 Aligned_cols=237 Identities=8% Similarity=-0.034 Sum_probs=156.7
Q ss_pred CCCCeEEEEEecCCCCEEE-----EEECCCcEEEEECCCCceEEEeeccCccE--EEEEEecCCCCEEEEEeCCCc----
Q 001366 827 NRSKLSCVCWNNYIKNYLA-----SADYDGVVKLWDACTGQTVSHYIEHEKRA--WSVDFSQVHPTKLASGSDDCS---- 895 (1092)
Q Consensus 827 h~~~V~~v~~sp~~~~~La-----Sgs~DgtV~IWD~~tg~~i~~l~~h~~~V--~sv~fsp~~~~~laSgs~Dg~---- 895 (1092)
|...+.+++|+|+ +++|| +|+.+.+|++||+.+++.+. ..+...+ .+++|+| +++.|+.++.|..
T Consensus 119 ~~~~~~~~~~SPD-G~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wsp-Dg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 119 GTVSLGTWAVSWD-GKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTP-DSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SCEEEEEEEECTT-SSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECT-TSSEEEEEECCCCTTSC
T ss_pred CCEEEEEEEECCC-CCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEec-CCCEEEEEEecCCCCCc
Confidence 4456899999998 77777 33445689999999987641 1122222 6899999 8899999998876
Q ss_pred ---------EEEEecCCCce--eeeEe---cCCceEEEEEccCCCeEEEEEECCC----eEEEEEcCCCCcceEEecCCC
Q 001366 896 ---------VKLWNINEKNS--LATIK---NIANVCCVQFSAHSSHLLAFGSADY----RTYCYDLRNARAPWCVLAGHE 957 (1092)
Q Consensus 896 ---------I~iWDl~~~~~--l~~l~---~~~~V~sl~fsp~~~~~latgs~Dg----~I~vwDlr~~~~~~~~l~~H~ 957 (1092)
|++|++.++.. ...+. +...+.++.|+|+|. +|++++.++ .|++||..++. ...+..+.
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~l~~~~~~~~~--~~~l~~~~ 271 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGK-YLFVYILRGWSENDVYWKRPGEKD--FRLLVKGV 271 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSC-CEEEEEEETTTEEEEEEECTTCSS--CEEEEECS
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCC-EEEEEEeCCCCceEEEEEcCCCCc--eEEeecCC
Confidence 99999998763 22232 235688999999997 455454444 67777654432 34555566
Q ss_pred CCeEEEEEcCCCEEEEEEC----CCeEEEEEcCCCCCCCCCCCceeEEEcCC--CCCeEEEEEecCCCEEEEEecCCcEE
Q 001366 958 KAVSYVKFLDSGTLVTAST----DNKLKLWDLKRTSHTGPSTNACSLTFSGH--TNEKNFVGLSTADGYIACGSESNEVY 1031 (1092)
Q Consensus 958 ~~V~~v~fs~~~~L~Sgs~----Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h--~~~V~~v~~spdg~~lasgs~Dg~I~ 1031 (1092)
..+....+++++ |+..+. ++.|.+||+.+... .....+..| ...+..++|+ ++.++++...|+..+
T Consensus 272 ~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~------~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~ 343 (695)
T 2bkl_A 272 GAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPAR------ASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSE 343 (695)
T ss_dssp SCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSG------GGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEE
T ss_pred CceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCc------cCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEE
Confidence 666666677666 554443 57899999874211 011333333 4457788888 677888999999888
Q ss_pred EEeCC-CCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEe----cCCeEEEEEc
Q 001366 1032 AYHRS-LPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAAN----SSGCIKVLQM 1091 (1092)
Q Consensus 1032 Iwd~~-~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs----~DG~V~vW~l 1091 (1092)
||... .+..+..+.+ .....|.+++++|++..|+... ..+.|++|++
T Consensus 344 l~~~~~~g~~~~~l~~-------------~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~ 395 (695)
T 2bkl_A 344 VRVATLKGKPVRTVQL-------------PGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV 395 (695)
T ss_dssp EEEEETTCCEEEECCC-------------SSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred EEEEeCCCCeeEEecC-------------CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 88654 2333332221 1134577888999988776332 3477888885
No 446
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.39 E-value=3.7e-10 Score=137.33 Aligned_cols=269 Identities=13% Similarity=0.027 Sum_probs=185.5
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECC--CCceEEE
Q 001366 789 RDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDAC--TGQTVSH 866 (1092)
Q Consensus 789 pdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~--tg~~i~~ 866 (1092)
+.+.++++...+++|.+||..+.. ....+.....+.++.|+|+ ++++++++.|+.|.+||+. +++.+.+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~--------v~~~i~~g~~p~~v~~SpD-Gr~lyv~~~dg~V~viD~~~~t~~~v~~ 235 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYE--------IKTVLDTGYAVHISRLSAS-GRYLFVIGRDGKVNMIDLWMKEPTTVAE 235 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCC--------EEEEEECSSCEEEEEECTT-SCEEEEEETTSEEEEEETTSSSCCEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCe--------EEEEEeCCCCccceEECCC-CCEEEEEcCCCeEEEEECCCCCCcEeEE
Confidence 445577788889999999987521 1112223445679999998 8888899999999999996 8888888
Q ss_pred eeccCccEEEEEEe----cCCCCEEEEEe-CCCcEEEEecCCCceeeeEecC------------CceEEEEEccCCCeEE
Q 001366 867 YIEHEKRAWSVDFS----QVHPTKLASGS-DDCSVKLWNINEKNSLATIKNI------------ANVCCVQFSAHSSHLL 929 (1092)
Q Consensus 867 l~~h~~~V~sv~fs----p~~~~~laSgs-~Dg~I~iWDl~~~~~l~~l~~~------------~~V~sl~fsp~~~~~l 929 (1092)
+.... ....++|+ | +++++++++ .+++|.|+|..+.+.+.++... ..+..+.+++++..++
T Consensus 236 i~~G~-~P~~ia~s~~~~p-DGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~v 313 (567)
T 1qks_A 236 IKIGS-EARSIETSKMEGW-EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFI 313 (567)
T ss_dssp EECCS-EEEEEEECCSTTC-TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEE
T ss_pred EecCC-CCceeEEccccCC-CCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEE
Confidence 77543 46799999 6 777766555 5699999999999988877631 2578899999887677
Q ss_pred EEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEE-CCCeEEEEEcCCCCCCCCCCCceeEEEcC---
Q 001366 930 AFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTAS-TDNKLKLWDLKRTSHTGPSTNACSLTFSG--- 1004 (1092)
Q Consensus 930 atgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs-~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~--- 1004 (1092)
+....+|.|.++|..+.+...............+.|+ ++.++++++ .+++|.++|+.+ +..+..+.-
T Consensus 314 v~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t--------~kl~~~i~vgg~ 385 (567)
T 1qks_A 314 VNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE--------GKLVAIEDTGGQ 385 (567)
T ss_dssp EEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT--------TEEEEEEECSSS
T ss_pred EEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCC--------CcEEEEEeccCc
Confidence 7777789999999987543222222334457788898 666766554 688999999984 333333322
Q ss_pred --CCCCeEEEEEecCCCEE-EEEe-cCCcEEEEeCCC-------CCceeeeeccccCCCCCccccCCCCCCEEEEEEeCC
Q 001366 1005 --HTNEKNFVGLSTADGYI-ACGS-ESNEVYAYHRSL-------PMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRR 1073 (1092)
Q Consensus 1005 --h~~~V~~v~~spdg~~l-asgs-~Dg~I~Iwd~~~-------~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd 1073 (1092)
|......+ ++|+++.+ +++. .++.|.+++... .+.+.++.. .+..-..|..+|+
T Consensus 386 ~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~--------------~g~g~~~i~~~p~ 450 (567)
T 1qks_A 386 TPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPA--------------LGGGSLFIKTHPN 450 (567)
T ss_dssp SBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC--------------SCSCCCCEECCTT
T ss_pred CCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEec--------------CCCCCEEEEeCCC
Confidence 33222112 68875544 4443 468999999876 344444431 0111233568999
Q ss_pred CCEEEEEec-------CCeEEEEEc
Q 001366 1074 SDMVVAANS-------SGCIKVLQM 1091 (1092)
Q Consensus 1074 ~~~Lasgs~-------DG~V~vW~l 1091 (1092)
+++|.+... .++|.|+|+
T Consensus 451 ~~~l~v~~~~~~~~~~~~~v~v~d~ 475 (567)
T 1qks_A 451 SQYLYVDATLNPEAEISGSVAVFDI 475 (567)
T ss_dssp CSEEEEECTTCSSHHHHTCEEEEEG
T ss_pred CCeEEEecCCCCCcccCceEEEEEC
Confidence 999988763 358999885
No 447
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.39 E-value=1.5e-09 Score=119.15 Aligned_cols=278 Identities=6% Similarity=0.000 Sum_probs=188.0
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEE
Q 001366 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKL 855 (1092)
Q Consensus 776 ~~h~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~I 855 (1092)
......+.+++++++|.++++...++.|.+|+... . ... .........+.++++.++ +.++++...++.|..
T Consensus 16 ~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~-~---~~~---~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~v~~ 87 (300)
T 2qc5_A 16 SIPDSGPYGITSSEDGKVWFTQHKANKISSLDQSG-R---IKE---FEVPTPDAKVMCLIVSSL-GDIWFTENGANKIGK 87 (300)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTS-C---EEE---EECSSTTCCEEEEEECTT-SCEEEEETTTTEEEE
T ss_pred CCCCCCcceeeECCCCCEEEEcCCCCeEEEECCCC-c---eEE---EECCCCCCcceeEEECCC-CCEEEEecCCCeEEE
Confidence 34556788999999999888887789999998652 1 110 011123467889999987 777777666789999
Q ss_pred EECCCCceEE-EeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeee-Ee-cCCceEEEEEccCCCeEEEEE
Q 001366 856 WDACTGQTVS-HYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLAT-IK-NIANVCCVQFSAHSSHLLAFG 932 (1092)
Q Consensus 856 WD~~tg~~i~-~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~-l~-~~~~V~sl~fsp~~~~~latg 932 (1092)
||.. ++... .+......+.++++.+ ++.++++...++.|..||.. ++.... +. ....+.++++++++. ++++.
T Consensus 88 ~d~~-g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~ 163 (300)
T 2qc5_A 88 LSKK-GGFTEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTE 163 (300)
T ss_dssp ECTT-SCEEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEE
T ss_pred ECCC-CCeEEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEe
Confidence 9987 65432 2222346689999998 78888877778899999987 554422 22 245689999999985 66666
Q ss_pred ECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC-CCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEE
Q 001366 933 SADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD-SGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNF 1011 (1092)
Q Consensus 933 s~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~-~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~ 1011 (1092)
..++.|..||. +++........+...+..+++.+ +..+++....+.|.+||.. .. .....+..+...+.+
T Consensus 164 ~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~-------~~~~~~~~~~~~~~~ 234 (300)
T 2qc5_A 164 NQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT-GE-------ISEYDIPTPNARPHA 234 (300)
T ss_dssp TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CC-------EEEEECSSTTCCEEE
T ss_pred cCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC-Cc-------EEEEECCCCCCCceE
Confidence 66789999998 44332222334456788999984 4444444456789999973 11 111223334567889
Q ss_pred EEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1012 VGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1012 v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
++++++|.++++...++.|..|+. .+. +..+.. ......+.++++.++|.++++.. + .|..++
T Consensus 235 i~~d~~g~l~v~~~~~~~i~~~~~-~g~-~~~~~~------------~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~ 297 (300)
T 2qc5_A 235 ITAGKNSEIWFTEWGANQIGRITN-DNT-IQEYQL------------QTENAEPHGITFGKDGSVWFALK-C-KIGKLN 297 (300)
T ss_dssp EEECSTTCEEEEETTTTEEEEECT-TSC-EEEEEC------------CSTTCCCCCEEECTTSCEEEECS-S-EEEEEE
T ss_pred EEECCCCCEEEeccCCCeEEEECC-CCc-EEEEEC------------CccCCccceeEeCCCCCEEEEcc-C-ceEEeC
Confidence 999999987777767789999987 333 222221 11234578899999999777665 4 666555
No 448
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.38 E-value=3.7e-12 Score=146.25 Aligned_cols=230 Identities=10% Similarity=-0.002 Sum_probs=153.7
Q ss_pred CeEEEEEecCCCCEEEEEECC---CcEEEEECCCCceEEEeeccCcc-EEEEEEecCCCCEEEEEeCCCcEEEEecCCCc
Q 001366 830 KLSCVCWNNYIKNYLASADYD---GVVKLWDACTGQTVSHYIEHEKR-AWSVDFSQVHPTKLASGSDDCSVKLWNINEKN 905 (1092)
Q Consensus 830 ~V~~v~~sp~~~~~LaSgs~D---gtV~IWD~~tg~~i~~l~~h~~~-V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~ 905 (1092)
.+.+++|+|+ +++|+.++.+ ..|.+||+.+++.... ..+... ...+.|+| +++.|+.++.++.|.+||+.+++
T Consensus 37 ~~~~~~~Spd-G~~l~~~~~~~g~~~l~~~d~~~~~~~~l-~~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 37 YFYQKCFTQD-GKKLLFAGDFDGNRNYYLLNLETQQAVQL-TEGKGDNTFGGFIST-DERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp CTTSCCBCTT-SCEEEEEECTTSSCEEEEEETTTTEEEEC-CCSSCBCTTTCEECT-TSSEEEEEETTTEEEEEETTTCC
T ss_pred eeecCcCCCC-CCEEEEEEecCCCceEEEEECCCCcEEEe-ecCCCCccccceECC-CCCEEEEEEcCCcEEEEECCCCC
Confidence 3667889998 7776666443 4788889988875443 333333 33478999 89999999999999999999887
Q ss_pred eeeeEecCCc-eEE-------------------EEEccCCCeEEEEE-----ECCCeEEEEEcCCCCcceEEecCCCCCe
Q 001366 906 SLATIKNIAN-VCC-------------------VQFSAHSSHLLAFG-----SADYRTYCYDLRNARAPWCVLAGHEKAV 960 (1092)
Q Consensus 906 ~l~~l~~~~~-V~s-------------------l~fsp~~~~~latg-----s~Dg~I~vwDlr~~~~~~~~l~~H~~~V 960 (1092)
.......... ... +.|+|++. .++.+ ..+..|++||+.+++. ..+..+...+
T Consensus 114 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~~~~~~~~l~~~d~~~g~~--~~~~~~~~~~ 190 (396)
T 3c5m_A 114 EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTS-WEKFAEFYHTNPTCRLIKVDIETGEL--EVIHQDTAWL 190 (396)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS-HHHHHHHHHTCCCEEEEEEETTTCCE--EEEEEESSCE
T ss_pred cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCc-ceeeeeeccCCCcceEEEEECCCCcE--EeeccCCccc
Confidence 6655542222 112 34677765 33322 4567899999987653 2333567788
Q ss_pred EEEEEcC--CCEEEEEECC------CeEEEEEcCCCCCCCCCCCceeEEEcCC--CCCeEEEEEecCCCEEEEEecC---
Q 001366 961 SYVKFLD--SGTLVTASTD------NKLKLWDLKRTSHTGPSTNACSLTFSGH--TNEKNFVGLSTADGYIACGSES--- 1027 (1092)
Q Consensus 961 ~~v~fs~--~~~L~Sgs~D------g~I~vWDl~~~~~~~~~~~~~~~~l~~h--~~~V~~v~~spdg~~lasgs~D--- 1027 (1092)
..+.|++ +..|+..+.+ ..|.+||+... ....+..+ ...+..++|+|+|++|+.++.+
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~---------~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 261 (396)
T 3c5m_A 191 GHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS---------NVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQ 261 (396)
T ss_dssp EEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC---------CCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTT
T ss_pred ccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC---------ceeEeeccCCCccccceEECCCCCEEEEEecCCCC
Confidence 9999986 4556665543 36888887632 12233333 2247788999999988777654
Q ss_pred --CcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeC-CCCEEEEEe----------------cCCeEEE
Q 001366 1028 --NEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRR-RSDMVVAAN----------------SSGCIKV 1088 (1092)
Q Consensus 1028 --g~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~sp-d~~~Lasgs----------------~DG~V~v 1088 (1092)
+.|++||+.+++......+ . ... ++|+| ++++|++++ .++.|++
T Consensus 262 ~~~~l~~~d~~~g~~~~l~~~------------~----~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~ 324 (396)
T 3c5m_A 262 TDRVIYKANPETLENEEVMVM------------P----PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYV 324 (396)
T ss_dssp CCEEEEEECTTTCCEEEEEEC------------C----SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEE
T ss_pred ccceEEEEECCCCCeEEeeeC------------C----CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEE
Confidence 4499999887764332211 0 123 89999 999888765 3478999
Q ss_pred EEc
Q 001366 1089 LQM 1091 (1092)
Q Consensus 1089 W~l 1091 (1092)
|++
T Consensus 325 ~d~ 327 (396)
T 3c5m_A 325 LNT 327 (396)
T ss_dssp EET
T ss_pred Eec
Confidence 985
No 449
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.36 E-value=5.3e-11 Score=150.06 Aligned_cols=238 Identities=13% Similarity=0.020 Sum_probs=156.1
Q ss_pred CCeEEEEEecCCCCEEEEEECC-----CcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCc--------
Q 001366 829 SKLSCVCWNNYIKNYLASADYD-----GVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCS-------- 895 (1092)
Q Consensus 829 ~~V~~v~~sp~~~~~LaSgs~D-----gtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~-------- 895 (1092)
..+..++|+|| +++||.++.+ .+|++||+.+++.+.. ..+...+.+++|+| + +.|+.++.|+.
T Consensus 163 ~~~~~~~~SPD-G~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wsp-D-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 163 TALDAWAASDD-GRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLG-N-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp EEEEEEEECTT-SSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEEST-T-SEEEEEECCCC--------
T ss_pred EEEEeEEECCC-CCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEEC-C-CEEEEEEecCccccccccc
Confidence 46889999998 7777766544 3699999999987543 22222346899999 7 77887777654
Q ss_pred ------EEEEecCCCce--eeeEec---CCceEEEEEccCCCeEEEEEECC-----CeEEEEEcCCCCcc-eEEecCCCC
Q 001366 896 ------VKLWNINEKNS--LATIKN---IANVCCVQFSAHSSHLLAFGSAD-----YRTYCYDLRNARAP-WCVLAGHEK 958 (1092)
Q Consensus 896 ------I~iWDl~~~~~--l~~l~~---~~~V~sl~fsp~~~~~latgs~D-----g~I~vwDlr~~~~~-~~~l~~H~~ 958 (1092)
|.+|++.++.. ...+.. ...+.++.|+|+|. +|+..+.+ ..|++||+.++... ...+..+..
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 317 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGR-WVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK 317 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC-EEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCC-EEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC
Confidence 88999987753 223332 22488999999997 55555543 48999999876322 345555555
Q ss_pred CeEEEEEcCCCEEEEEECC----CeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEe
Q 001366 959 AVSYVKFLDSGTLVTASTD----NKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYH 1034 (1092)
Q Consensus 959 ~V~~v~fs~~~~L~Sgs~D----g~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd 1034 (1092)
.+....+.+++.|+..+.+ +.|.+||+.+.. ......+..+...+..++++ ++.++++...|+..+||.
T Consensus 318 ~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~------~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~ 390 (741)
T 1yr2_A 318 AQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGST------PRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLA 390 (741)
T ss_dssp SCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSS------CEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEE
T ss_pred ceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCc------cccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEE
Confidence 5555555677888777654 459999987321 12223334444556677777 556788888899877775
Q ss_pred CC-CCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEE-EEe---cCCeEEEEEc
Q 001366 1035 RS-LPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVV-AAN---SSGCIKVLQM 1091 (1092)
Q Consensus 1035 ~~-~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~La-sgs---~DG~V~vW~l 1091 (1092)
.. .+..+..+.+ .+...|..++|+|++..|+ +.+ ..+.|++|++
T Consensus 391 ~~~~g~~~~~l~~-------------~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 391 FDLDGKPAGAVSL-------------PGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp EETTSCEEEECBC-------------SSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred EeCCCCceeeccC-------------CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 44 2333332221 1245688999999987665 322 3478888885
No 450
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.33 E-value=4.5e-10 Score=124.78 Aligned_cols=243 Identities=10% Similarity=0.094 Sum_probs=162.3
Q ss_pred CCEEEEEEcCCCCEEEE-------EeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCc
Q 001366 780 NVICSISFDRDEDHFAA-------AGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV 852 (1092)
Q Consensus 780 ~~V~sl~fspdg~~lat-------gg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dgt 852 (1092)
....+++|+++|.++++ +..++.|.+|+..... ..........++...+.+++++++.+ .|..++.++.
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~---~~~~~~~~~~~~~~~~~~i~~~~~~g-~l~v~~~~~~ 93 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGK---KTVICKPEVNGYGGIPAGCQCDRDAN-QLFVADMRLG 93 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCC---EEEEECCEETTEECCEEEEEECSSSS-EEEEEETTTE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCc---EEEEEecccCCCCCCCceEEEecCCC-cEEEEECCCC
Confidence 35578999999998888 5678899999865421 11000000011345688999998633 4444555558
Q ss_pred EEEEECCCCceEEE-eec----cCccEEEEEEecCCCCEEEEEeCC---------------CcEEEEecCCCceeeeEec
Q 001366 853 VKLWDACTGQTVSH-YIE----HEKRAWSVDFSQVHPTKLASGSDD---------------CSVKLWNINEKNSLATIKN 912 (1092)
Q Consensus 853 V~IWD~~tg~~i~~-l~~----h~~~V~sv~fsp~~~~~laSgs~D---------------g~I~iWDl~~~~~l~~l~~ 912 (1092)
|.+||.. ++.... ... ....+.++++.+ ++.++++...+ +.|..||.. ++.......
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~ 170 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA 170 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC
Confidence 9999988 765432 221 123578999999 78887777655 567777765 554444444
Q ss_pred CCceEEEEEc----cCCCeEEEEEECCCeEEEEEcC-CCCc----ceEEecCCC-CCeEEEEEc-CCCEEEEEECCCeEE
Q 001366 913 IANVCCVQFS----AHSSHLLAFGSADYRTYCYDLR-NARA----PWCVLAGHE-KAVSYVKFL-DSGTLVTASTDNKLK 981 (1092)
Q Consensus 913 ~~~V~sl~fs----p~~~~~latgs~Dg~I~vwDlr-~~~~----~~~~l~~H~-~~V~~v~fs-~~~~L~Sgs~Dg~I~ 981 (1092)
......++|+ |++..++++...++.|++||+. ++.. ....+.++. ..+..+++. ++..+++...++.|.
T Consensus 171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~ 250 (314)
T 1pjx_A 171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIE 250 (314)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEE
Confidence 4567889999 9985455666678999999986 3321 222334444 567889998 555666666889999
Q ss_pred EEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEE-EEEecCCcEEEEeCCC
Q 001366 982 LWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYI-ACGSESNEVYAYHRSL 1037 (1092)
Q Consensus 982 vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~l-asgs~Dg~I~Iwd~~~ 1037 (1092)
+||..+ +.....+..+...+.+++|+++|..| ++...++.|..|+...
T Consensus 251 ~~d~~~--------g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 251 VFGPDG--------GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EECTTC--------BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEcCCC--------CcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 999863 33445556666789999999999944 5555678899998764
No 451
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.33 E-value=1.8e-09 Score=124.61 Aligned_cols=267 Identities=10% Similarity=-0.010 Sum_probs=174.1
Q ss_pred cCCCCEEEEEeC--CC---cEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEE----------CCCc
Q 001366 788 DRDEDHFAAAGV--SK---KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASAD----------YDGV 852 (1092)
Q Consensus 788 spdg~~latgg~--D~---~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs----------~Dgt 852 (1092)
.|++.++.++.. .. +|.+||..+.. ... .......+ .++++|+ +++|+.+. .+++
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~---~~~----~i~~g~~p--~i~~spD-g~~lyv~n~~~~~~~rg~~~~~ 98 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGS---ILG----HVNGGFLP--NPVAAHS-GSEFALASTSFSRIAKGKRTDY 98 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCe---EEE----EecCCCCC--CeEECCC-CCEEEEEeccccccccCCCCCe
Confidence 356665554432 22 78999986521 111 11111222 8999998 77777665 3688
Q ss_pred EEEEECCCCceEEEeecc-------CccEEEEEEecCCCCEEEEEeC--CCcEEEEecCCCceeee-EecCCceEEEEEc
Q 001366 853 VKLWDACTGQTVSHYIEH-------EKRAWSVDFSQVHPTKLASGSD--DCSVKLWNINEKNSLAT-IKNIANVCCVQFS 922 (1092)
Q Consensus 853 V~IWD~~tg~~i~~l~~h-------~~~V~sv~fsp~~~~~laSgs~--Dg~I~iWDl~~~~~l~~-l~~~~~V~sl~fs 922 (1092)
|.+||..+.+.+..+... ......+.|+| ++++|+.++. ++.|.++| .+++.+.+ +.... |+.+.
T Consensus 99 v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~---~~~~~ 173 (373)
T 2mad_H 99 VEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT---CYHIH 173 (373)
T ss_pred EEEEECCCCcEEEEEECCCccccccCCCccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc---eEEEE
Confidence 999999998887766422 12345899999 8888888764 57899999 99998887 66543 35566
Q ss_pred cCCCeEEEEEECCCeEEEEEcCCCCcceEEe----cCCCCCe-EEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCC
Q 001366 923 AHSSHLLAFGSADYRTYCYDLRNARAPWCVL----AGHEKAV-SYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTN 996 (1092)
Q Consensus 923 p~~~~~latgs~Dg~I~vwDlr~~~~~~~~l----~~H~~~V-~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~ 996 (1092)
|++...+++.+.||.+.++|. +++...... .....++ ....|. +++.++..+..+.+.+.|+.....
T Consensus 174 ~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~------ 246 (373)
T 2mad_H 174 PGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGA------ 246 (373)
T ss_pred eCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcc------
Confidence 777667788889999999999 665321111 0111121 223343 344444444778999999863211
Q ss_pred ceeEEEcC----------CCCCeEEEEEecCCCEEEEEec----------CCcEEEEeCCCCCceeeeeccccCCCCCcc
Q 001366 997 ACSLTFSG----------HTNEKNFVGLSTADGYIACGSE----------SNEVYAYHRSLPMPITSYKFGSIDPISGKE 1056 (1092)
Q Consensus 997 ~~~~~l~~----------h~~~V~~v~~spdg~~lasgs~----------Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~ 1056 (1092)
..+..+.- .......++++|+++.+..+.. ++.|.++|..+.+.+.++..+
T Consensus 247 ~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g--------- 317 (373)
T 2mad_H 247 TNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG--------- 317 (373)
T ss_pred eEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC---------
Confidence 11111110 1122445789999886655432 367999999999988887642
Q ss_pred ccCCCCCCEEEEEEeCCCC-EEEEEe-cCCeEEEEEc
Q 001366 1057 TDDDNGLFVSSVCWRRRSD-MVVAAN-SSGCIKVLQM 1091 (1092)
Q Consensus 1057 ~~~~h~~~V~sva~spd~~-~Lasgs-~DG~V~vW~l 1091 (1092)
....+++|+||++ .|++++ .++.|.|||+
T Consensus 318 ------~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 318 ------HDVDAISVAQDGGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred ------CCcCeEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 2478999999999 788887 5899999985
No 452
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.30 E-value=3.3e-09 Score=116.41 Aligned_cols=235 Identities=6% Similarity=-0.044 Sum_probs=165.3
Q ss_pred CCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEE-eeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCce
Q 001366 828 RSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSH-YIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNS 906 (1092)
Q Consensus 828 ~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~-l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~ 906 (1092)
...+.++++.++ +.++++...++.|.+||.. ++.... +..+...+.++++.+ ++.++++...++.|..||.. ++
T Consensus 14 ~~~~~~i~~d~~-g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~- 88 (299)
T 2z2n_A 14 DTGPYGITVSDK-GKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGRITKK-GI- 88 (299)
T ss_dssp SCCEEEEEECTT-SCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SC-
T ss_pred CCCccceEECCC-CCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEEECCC-Cc-
Confidence 467899999997 7777766668999999987 554322 223456789999998 78888887778899999986 33
Q ss_pred eeeEe---cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcC-CCEEEEEECCCeEEE
Q 001366 907 LATIK---NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLD-SGTLVTASTDNKLKL 982 (1092)
Q Consensus 907 l~~l~---~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~-~~~L~Sgs~Dg~I~v 982 (1092)
+..+. ....+.++++++++. ++++...++.|.+||. +++........+...+..+++.+ +..+++...++.|.+
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 166 (299)
T 2z2n_A 89 IKEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGR 166 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred EEEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEE
Confidence 33333 345789999999884 6666667889999998 44432222334456789999984 444555555789999
Q ss_pred EEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCC
Q 001366 983 WDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNG 1062 (1092)
Q Consensus 983 WDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~ 1062 (1092)
||. +... ....+..+...+..++++++|.++++...++.|.+|+. .+.. ..+.. ..+.
T Consensus 167 ~~~-~g~~-------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~-~~~~~------------~~~~ 224 (299)
T 2z2n_A 167 ITE-SGDI-------TEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI-TEFKI------------PTPN 224 (299)
T ss_dssp ECT-TCCE-------EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE-EEEEC------------SSTT
T ss_pred EcC-CCcE-------EEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcE-EEEEC------------CCCC
Confidence 997 3211 11122334556889999999998877777889999998 5542 22211 1234
Q ss_pred CCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1063 LFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1063 ~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
..+.++++++++.++++...++.|.+|+.
T Consensus 225 ~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 225 ARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CCceeEEECCCCCEEEeccCCceEEEECC
Confidence 56899999999998877767888888873
No 453
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.29 E-value=9.1e-11 Score=147.87 Aligned_cols=242 Identities=13% Similarity=0.056 Sum_probs=159.5
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCc
Q 001366 778 SANVICSISFDRDEDHFAAAGVS-----KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGV 852 (1092)
Q Consensus 778 h~~~V~sl~fspdg~~latgg~D-----~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dgt 852 (1092)
|...+.+++|+|||++||.++.+ .+|++||+.+... .. . ..+...+..++|+|+ +.|+.++.|+.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~--~~----~--~~~~~~~~~~~wspD--~~l~~~~~~~~ 230 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP--LA----D--ELKWVKFSGLAWLGN--DALLYSRFAEP 230 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE--EE----E--EEEEEESCCCEESTT--SEEEEEECCCC
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC--CC----c--cCCCceeccEEEECC--CEEEEEEecCc
Confidence 33467889999999999987754 4699999876321 11 0 011122457899997 56666666554
Q ss_pred --------------EEEEECCCCc--eEEEee--ccCccEEEEEEecCCCCEEEEEeCCC-----cEEEEecCCC--cee
Q 001366 853 --------------VKLWDACTGQ--TVSHYI--EHEKRAWSVDFSQVHPTKLASGSDDC-----SVKLWNINEK--NSL 907 (1092)
Q Consensus 853 --------------V~IWD~~tg~--~i~~l~--~h~~~V~sv~fsp~~~~~laSgs~Dg-----~I~iWDl~~~--~~l 907 (1092)
|++|++.+++ ....+. .+...+.++.|+| +++.|+..+.++ .|.+||+.++ .+.
T Consensus 231 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 309 (741)
T 1yr2_A 231 KEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPV 309 (741)
T ss_dssp --------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCC
T ss_pred ccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCccc
Confidence 8999998775 233333 3334588999999 888887777544 8999999877 413
Q ss_pred eeEe-cCCceEEEEEccCCCeEEEEEEC----CCeEEEEEcCCCC-cceEEecCCCCCeEEEEEcCCCEEEEEECCCeEE
Q 001366 908 ATIK-NIANVCCVQFSAHSSHLLAFGSA----DYRTYCYDLRNAR-APWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLK 981 (1092)
Q Consensus 908 ~~l~-~~~~V~sl~fsp~~~~~latgs~----Dg~I~vwDlr~~~-~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~ 981 (1092)
..+. ....+.... +|++. .|+..+. ++.|++||+.++. .....+..+...+..+.|..+..+++...|+..+
T Consensus 310 ~~l~~~~~~~~~~~-~~dg~-~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~ 387 (741)
T 1yr2_A 310 TALIPDLKAQWDFV-DGVGD-QLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQ 387 (741)
T ss_dssp EEEECSSSSCEEEE-EEETT-EEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEE
T ss_pred EEecCCCCceEEEE-eccCC-EEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEE
Confidence 4444 333444443 48886 4444444 4569999998742 3233445555667778887666778888999988
Q ss_pred EEEcCCCCCCCCCCCceeEEEcC-CCCCeEEEEEecCCCEEE-EEe---cCCcEEEEeCCCCC
Q 001366 982 LWDLKRTSHTGPSTNACSLTFSG-HTNEKNFVGLSTADGYIA-CGS---ESNEVYAYHRSLPM 1039 (1092)
Q Consensus 982 vWDl~~~~~~~~~~~~~~~~l~~-h~~~V~~v~~spdg~~la-sgs---~Dg~I~Iwd~~~~~ 1039 (1092)
||.+.. .+.....+.. +...+..++++|+++.|+ +.+ ..++|++||+.+++
T Consensus 388 l~~~~~-------~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 388 VLAFDL-------DGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEET-------TSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEEeC-------CCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 887652 1234455543 356688899999987554 222 34789999988765
No 454
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.26 E-value=1.3e-09 Score=125.74 Aligned_cols=178 Identities=16% Similarity=0.095 Sum_probs=135.2
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCC----CCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEE
Q 001366 781 VICSISFDRDEDHFAAAGVSKKIKIFEFNALF----NDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLW 856 (1092)
Q Consensus 781 ~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~----~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IW 856 (1092)
.++.+++++...++++|+.+ .++||++.... ..... ..+.....+.. |+.|+| + +.+|+++ .++.|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~-~~~~~~~~lp~-V~~l~f--d-~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTP-LTFKWEKEIPD-VIFVCF--H-GDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCC-CCCSEEEECTT-EEEEEE--E-TTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhcccccc-ccceEEeeCCC-eeEEEE--C-CCEEEEE-cCCcEEEE
Confidence 68889999999999999987 67779976421 00000 12223344566 999999 4 7889888 88999999
Q ss_pred ECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCC
Q 001366 857 DACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADY 936 (1092)
Q Consensus 857 D~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg 936 (1092)
|+.+.........|...+.++.+.+ + .+++++.||.|.+||+.++.... ....|.|++|+|+| ++.|..||
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~--p-~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG---~~vg~~dg 182 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVN--N-TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ---LAVLLKDR 182 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECS--S-EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE---EEEEETTS
T ss_pred EchhhhccCccceeecceeeEEecC--C-CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc---eEEEEcCC
Confidence 9988776666777888898888776 2 38899999999999999877643 44689999999998 57799999
Q ss_pred eEEEEEcCCCCcc-eEEe------c---CCCCCeEEEEEc-CCCEEEEE
Q 001366 937 RTYCYDLRNARAP-WCVL------A---GHEKAVSYVKFL-DSGTLVTA 974 (1092)
Q Consensus 937 ~I~vwDlr~~~~~-~~~l------~---~H~~~V~~v~fs-~~~~L~Sg 974 (1092)
.+++|+....... ..++ . +|...|.+|.|. ++.++++-
T Consensus 183 ~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 183 SFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp CEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 9999988765421 2344 2 478899999998 55566653
No 455
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.25 E-value=2.9e-09 Score=118.18 Aligned_cols=239 Identities=9% Similarity=0.068 Sum_probs=160.3
Q ss_pred CCCeEEEEEecCCCCEEEE-------EECCCcEEEEECCCCceEEEee----ccCccEEEEEEecCC-CCEEEEEeCCCc
Q 001366 828 RSKLSCVCWNNYIKNYLAS-------ADYDGVVKLWDACTGQTVSHYI----EHEKRAWSVDFSQVH-PTKLASGSDDCS 895 (1092)
Q Consensus 828 ~~~V~~v~~sp~~~~~LaS-------gs~DgtV~IWD~~tg~~i~~l~----~h~~~V~sv~fsp~~-~~~laSgs~Dg~ 895 (1092)
-....+++|+++ +.++++ +..++.|.+||..+++...... ++...+.++.+++ + +.++++. ..+.
T Consensus 17 ~~~~~~~~~~~~-g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~-~~g~l~v~~-~~~~ 93 (314)
T 1pjx_A 17 IPGAEGPVFDKN-GDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDR-DANQLFVAD-MRLG 93 (314)
T ss_dssp CTTCEEEEECTT-SCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECS-SSSEEEEEE-TTTE
T ss_pred CCCccCceECCC-CCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEec-CCCcEEEEE-CCCC
Confidence 345689999986 777777 5778999999988887543221 2556789999998 6 6555554 4457
Q ss_pred EEEEecCCCceeee-Eec-----CCceEEEEEccCCCeEEEEEECC---------------CeEEEEEcCCCCcceEEec
Q 001366 896 VKLWNINEKNSLAT-IKN-----IANVCCVQFSAHSSHLLAFGSAD---------------YRTYCYDLRNARAPWCVLA 954 (1092)
Q Consensus 896 I~iWDl~~~~~l~~-l~~-----~~~V~sl~fsp~~~~~latgs~D---------------g~I~vwDlr~~~~~~~~l~ 954 (1092)
|.+||.. ++.... ... ...+.++++++++. ++++...+ +.|..||.. ++ ...+.
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~--~~~~~ 168 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ--MIQVD 168 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC--EEEEE
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCC-CC--EEEec
Confidence 9999998 665433 221 23588999999985 55555544 578888765 32 22222
Q ss_pred CCCCCeEEEEEc----CCC-EEEEE-ECCCeEEEEEcCC-CCCCCCCCCceeEEEcCCC-CCeEEEEEecCCCEEEEEec
Q 001366 955 GHEKAVSYVKFL----DSG-TLVTA-STDNKLKLWDLKR-TSHTGPSTNACSLTFSGHT-NEKNFVGLSTADGYIACGSE 1026 (1092)
Q Consensus 955 ~H~~~V~~v~fs----~~~-~L~Sg-s~Dg~I~vWDl~~-~~~~~~~~~~~~~~l~~h~-~~V~~v~~spdg~~lasgs~ 1026 (1092)
.+......++|+ +++ .|+.+ ..++.|.+||+.. +.. ........+.++. .....++++++|.++++...
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~---~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKI---ENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEE---EEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcc---ccceEEEECCCCCCCCCCceEECCCCCEEEEEcC
Confidence 333456788887 665 45444 5678999999761 110 0001223333443 56788999999998888888
Q ss_pred CCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEE-EEEecCCeEEEEEc
Q 001366 1027 SNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMV-VAANSSGCIKVLQM 1091 (1092)
Q Consensus 1027 Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~L-asgs~DG~V~vW~l 1091 (1092)
++.|.+|+..+++.+..+. .+...+.+++|+|++..| ++...++.|.+|++
T Consensus 246 ~~~i~~~d~~~g~~~~~~~--------------~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPKMRIR--------------CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp TTEEEEECTTCBSCSEEEE--------------CSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCEEEEEcCCCCcEeEEEe--------------CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 8999999987666554443 123568999999999944 55556788988875
No 456
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.24 E-value=1.6e-09 Score=119.57 Aligned_cols=231 Identities=10% Similarity=-0.011 Sum_probs=165.3
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCC-CCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEee
Q 001366 790 DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR-SKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYI 868 (1092)
Q Consensus 790 dg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~ 868 (1092)
.+++|++++.|+.|.+||..+.. ... ....+. ..+.++.+.|+ +++|+ +.++.|+.||. +|+.+..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~---~~w----~~~~~~~~~~~~~~~~pd-G~ilv--s~~~~V~~~d~-~G~~~W~~~ 72 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKE---IVW----EYPLEKGWECNSVAATKA-GEILF--SYSKGAKMITR-DGRELWNIA 72 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTE---EEE----EEECCTTCCCCEEEECTT-SCEEE--ECBSEEEEECT-TSCEEEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCe---EEE----EeCCCccCCCcCeEECCC-CCEEE--eCCCCEEEECC-CCCEEEEEc
Confidence 46789999999999999975411 111 111122 46789999998 78888 45789999999 899999988
Q ss_pred ccC-ccEEEEEEecCCCCEEEEEeC-CCcEEEEecCCCceeeeEecC-------CceEEEEEccCCCeEEEEEECCCeEE
Q 001366 869 EHE-KRAWSVDFSQVHPTKLASGSD-DCSVKLWNINEKNSLATIKNI-------ANVCCVQFSAHSSHLLAFGSADYRTY 939 (1092)
Q Consensus 869 ~h~-~~V~sv~fsp~~~~~laSgs~-Dg~I~iWDl~~~~~l~~l~~~-------~~V~sl~fsp~~~~~latgs~Dg~I~ 939 (1092)
.+. ..+.++.+.+ +++++++.+. ++.|..+|. +++.+..+... .....+++.++|. ++++...++.|.
T Consensus 73 ~~~~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~~~~v~ 149 (276)
T 3no2_A 73 APAGCEMQTARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEVR 149 (276)
T ss_dssp CCTTCEEEEEEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETTTTEEE
T ss_pred CCCCccccccEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCC-EEEEecCCCEEE
Confidence 653 5788999999 8999998887 778888886 68877776521 2345667888885 888899999999
Q ss_pred EEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCC------CCeEEE
Q 001366 940 CYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHT------NEKNFV 1012 (1092)
Q Consensus 940 vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~------~~V~~v 1012 (1092)
+||.. ++. +..+..+ ..+.++.+. +++.+++++.++.|..+|.. +++.+.++..+. ..+..+
T Consensus 150 ~~d~~-G~~-~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~--------tG~~~w~~~~~~~~~~~l~~~~~~ 218 (276)
T 3no2_A 150 EIAPN-GQL-LNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLE--------SNRIVRRVNANDIEGVQLFFVAQL 218 (276)
T ss_dssp EECTT-SCE-EEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTT--------TCCEEEEEEGGGSBSCCCSEEEEE
T ss_pred EECCC-CCE-EEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCc--------CCcEEEEecCCCCCCccccccccc
Confidence 99987 664 4444443 334556666 67788888888899999987 355666665322 236788
Q ss_pred EEecCCCEEEEEecC--------CcEEEEeC-CCCCceeeee
Q 001366 1013 GLSTADGYIACGSES--------NEVYAYHR-SLPMPITSYK 1045 (1092)
Q Consensus 1013 ~~spdg~~lasgs~D--------g~I~Iwd~-~~~~~i~~~~ 1045 (1092)
...++|.++++.... +..+++.+ ..++.+..+.
T Consensus 219 ~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~ 260 (276)
T 3no2_A 219 FPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLN 260 (276)
T ss_dssp EECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEEC
T ss_pred eEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEec
Confidence 889999988887421 23355555 4666666654
No 457
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.23 E-value=2.2e-09 Score=123.35 Aligned_cols=270 Identities=11% Similarity=0.013 Sum_probs=178.7
Q ss_pred EcCCCCEEEEEeC-----CCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEE----------CCC
Q 001366 787 FDRDEDHFAAAGV-----SKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASAD----------YDG 851 (1092)
Q Consensus 787 fspdg~~latgg~-----D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs----------~Dg 851 (1092)
..|++..+.+... ++.|.++|..+.. +.. .......+ .++++|+ ++++++++ .++
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~---v~~----~I~vG~~P--~va~spD-G~~lyVan~~~~r~~~G~~~~ 109 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGR---VIG----MIDGGFLP--NPVVADD-GSFIAHASTVFSRIARGERTD 109 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTE---EEE----EEEECSSC--EEEECTT-SSCEEEEEEEEEETTEEEEEE
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCe---EEE----EEECCCCC--cEEECCC-CCEEEEEcccccccccCCCCC
Confidence 3577776666654 6789999986521 111 11112333 4999999 55555543 367
Q ss_pred cEEEEECCCCceEEEeecc-------CccEEEEEEecCCCCEEEEEeC--CCcEEEEecCCCceeeeEecCCceEEEEEc
Q 001366 852 VVKLWDACTGQTVSHYIEH-------EKRAWSVDFSQVHPTKLASGSD--DCSVKLWNINEKNSLATIKNIANVCCVQFS 922 (1092)
Q Consensus 852 tV~IWD~~tg~~i~~l~~h-------~~~V~sv~fsp~~~~~laSgs~--Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fs 922 (1092)
+|.+||..+++.+.++.-. ......+.|+| ++++++.+.. ++.|.++|+.+++.+.++..... ..+.
T Consensus 110 ~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~---~~~~ 185 (386)
T 3sjl_D 110 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC---YHIF 185 (386)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEE
T ss_pred EEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc---ceee
Confidence 8999999999988887532 12456799999 8888777763 68999999999999999975542 2334
Q ss_pred cCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCC----CCeE-EEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCC
Q 001366 923 AHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHE----KAVS-YVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTN 996 (1092)
Q Consensus 923 p~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~----~~V~-~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~ 996 (1092)
|.+...+++.+.||.+.+.++............+. ..+. ...|. +++.++-.+.+|+|.+.|+.....
T Consensus 186 P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~------ 259 (386)
T 3sjl_D 186 PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDA------ 259 (386)
T ss_dssp EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSC------
T ss_pred cCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcc------
Confidence 65555777888999999999976322222221111 1221 23554 455555577789999999974321
Q ss_pred ceeEEEc---------C-CCCCeEEEEEecCCCEEEEEec----------CCcEEEEeCCCCCceeeeeccccCCCCCcc
Q 001366 997 ACSLTFS---------G-HTNEKNFVGLSTADGYIACGSE----------SNEVYAYHRSLPMPITSYKFGSIDPISGKE 1056 (1092)
Q Consensus 997 ~~~~~l~---------~-h~~~V~~v~~spdg~~lasgs~----------Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~ 1056 (1092)
.....+. + .......++++++++.+..... .+.|.++|..+.+.+.++..+
T Consensus 260 ~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg--------- 330 (386)
T 3sjl_D 260 KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG--------- 330 (386)
T ss_dssp EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE---------
T ss_pred eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC---------
Confidence 1111111 0 1112234788999886655432 257999999999999988753
Q ss_pred ccCCCCCCEEEEEEeCCCC-EEEEEe-cCCeEEEEEc
Q 001366 1057 TDDDNGLFVSSVCWRRRSD-MVVAAN-SSGCIKVLQM 1091 (1092)
Q Consensus 1057 ~~~~h~~~V~sva~spd~~-~Lasgs-~DG~V~vW~l 1091 (1092)
..+++|++++|++ +|++++ .++.|.|+|.
T Consensus 331 ------~~~~~lavs~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 331 ------HEIDSINVSQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp ------EEECEEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred ------CCcceEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 3588999999996 777765 4899999985
No 458
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.19 E-value=5.6e-09 Score=122.05 Aligned_cols=247 Identities=9% Similarity=0.025 Sum_probs=166.6
Q ss_pred CCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCC--cEEEEecCCCce
Q 001366 829 SKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDC--SVKLWNINEKNS 906 (1092)
Q Consensus 829 ~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg--~I~iWDl~~~~~ 906 (1092)
.....|+|+++ ++++++...++.|++||..+++....... ..... ++|++ ++..|+++..++ .|.+||...+..
T Consensus 131 ~~P~~la~d~~-g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~-~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGN-NTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTK-DKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECST-TEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECT-TSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCC-CCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEec-CCCcEEEEecCCCceEEEEEcCCCce
Confidence 45789999987 77777777789999999988776555444 33344 99999 788888888766 789999887665
Q ss_pred eeeE----e-cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEE---ecCCCCCe-E-EEEEcC-CCEEE-EE
Q 001366 907 LATI----K-NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCV---LAGHEKAV-S-YVKFLD-SGTLV-TA 974 (1092)
Q Consensus 907 l~~l----~-~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~---l~~H~~~V-~-~v~fs~-~~~L~-Sg 974 (1092)
...+ . ....+.+++++|++..+++ +..++.|+.||..+....+.. ..++...- . .++|++ ++.|+ +-
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 4444 2 3456789999995544444 667889999999866432110 12222222 3 899985 55554 55
Q ss_pred ECCCeEEEEEcCCCCCCCCCCCceeEEEcCC---------------CCCeEEEEEecCCCEEEEEe-cCCcEEEEeCCCC
Q 001366 975 STDNKLKLWDLKRTSHTGPSTNACSLTFSGH---------------TNEKNFVGLSTADGYIACGS-ESNEVYAYHRSLP 1038 (1092)
Q Consensus 975 s~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h---------------~~~V~~v~~spdg~~lasgs-~Dg~I~Iwd~~~~ 1038 (1092)
...+.|..||... . ...+.++ -.....++++++|.++++-+ .++.|+.|+...+
T Consensus 286 ~~~~~I~~~~~~g---------~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 286 QNLSSVYKITPDG---------E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp TTTTEEEEECTTC---------C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT
T ss_pred CCCCEEEEEecCC---------C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC
Confidence 5678899998762 1 2233232 24578899999999888888 8999999997666
Q ss_pred Cceeeeecc-ccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1039 MPITSYKFG-SIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1039 ~~i~~~~~~-~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
........+ ......+.. ....-....+|++++++.++++-..++.|+.+.+
T Consensus 356 ~v~~~~g~~~~~g~~~g~~-~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 356 YVSTVAGQVDVASQIDGTP-LEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEEEECTTCBSCCCBST-TTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEEEeCCCCCCCcCCCCh-hceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 533222110 000001100 0111246899999999998888888999998865
No 459
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.17 E-value=7.5e-12 Score=136.99 Aligned_cols=70 Identities=16% Similarity=0.026 Sum_probs=59.2
Q ss_pred cccccCCC-C----CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhh-hcCccccCCCCCCeEEccCCcEEEeccccccc
Q 001366 305 RQGSSDHG-V----NLREWLNARGHKGKRIECLYIFRQIVALVDYHH-TQGVTFLDLKPSSFKLLQSNQVKYIGPIIQKE 378 (1092)
Q Consensus 305 ~~~~~~~G-g----sL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lH-s~gIvHrDLKP~Nill~~~~~vkl~Dfg~~~~ 378 (1092)
++|||+.+ | +|.+++... +..++..++.||+.+|.||| ++||+||||||+|||++. .++|+|||++..
T Consensus 145 lVmE~~g~~g~~~~~L~~~~~~~----~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~ 218 (258)
T 1zth_A 145 LLMEFIGEDELPAPTLVELGREL----KELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVT 218 (258)
T ss_dssp EEEECCEETTEECCBHHHHGGGG----GGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEE
T ss_pred EEEEecCCCCCccccHHHHhhcc----ChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECccccc
Confidence 48999942 3 888876431 23467899999999999999 999999999999999988 899999999987
Q ss_pred cc
Q 001366 379 TL 380 (1092)
Q Consensus 379 ~~ 380 (1092)
..
T Consensus 219 ~~ 220 (258)
T 1zth_A 219 LR 220 (258)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 460
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.17 E-value=5.1e-09 Score=122.38 Aligned_cols=232 Identities=10% Similarity=0.060 Sum_probs=160.5
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCC--cEEEEE
Q 001366 780 NVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG--VVKLWD 857 (1092)
Q Consensus 780 ~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dg--tV~IWD 857 (1092)
.....|+|+++++++++...++.|++||..... + ........... ++|+++ ++.|++++.++ .|.+||
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~---~-----~~~~~~~~~~~-ia~~~~-g~~l~~~d~~~~~~I~~~d 200 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK---V-----TTVHPGFKGGK-PAVTKD-KQRVYSIGWEGTHTVYVYM 200 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTE---E-----EEEEETCCBCB-CEECTT-SSEEEEEBSSTTCEEEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCE---E-----EEeeccCCCCc-eeEecC-CCcEEEEecCCCceEEEEE
Confidence 467889999999988888888999999986411 1 11111122233 899998 77888888766 799999
Q ss_pred CCCCceEEEe----eccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeE----e-cCCce---EEEEEccCC
Q 001366 858 ACTGQTVSHY----IEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATI----K-NIANV---CCVQFSAHS 925 (1092)
Q Consensus 858 ~~tg~~i~~l----~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l----~-~~~~V---~sl~fsp~~ 925 (1092)
...+.....+ ......+++++++|.++ .|+.+..++.|..||..++... .+ . ..... ..++|+|++
T Consensus 201 ~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g-~lyv~d~~~~I~~~d~~~~~~~-~~~~~~~~g~~~~~P~~~ia~~p~~ 278 (409)
T 3hrp_A 201 KASGWAPTRIGQLGSTFSGKIGAVALDETEE-WLYFVDSNKNFGRFNVKTQEVT-LIKQLELSGSLGTNPGPYLIYYFVD 278 (409)
T ss_dssp GGGTTCEEEEEECCTTSCSCCCBCEECTTSS-EEEEECTTCEEEEEETTTCCEE-EEEECCCCSCCCCSSCCEEEEETTT
T ss_pred cCCCceeEEeeeccchhcCCcEEEEEeCCCC-eEEEEECCCcEEEEECCCCCEE-EEecccccCCCCCCccccEEEeCCC
Confidence 8766554444 22456678999999444 4555777889999999876532 23 1 11111 299999976
Q ss_pred CeEEEEEECCCeEEEEEcCCCCcceEEecCCC---------------CCeEEEEEc-CCCEEEEEE-CCCeEEEEEcCCC
Q 001366 926 SHLLAFGSADYRTYCYDLRNARAPWCVLAGHE---------------KAVSYVKFL-DSGTLVTAS-TDNKLKLWDLKRT 988 (1092)
Q Consensus 926 ~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~---------------~~V~~v~fs-~~~~L~Sgs-~Dg~I~vWDl~~~ 988 (1092)
..++++...++.|+.||.... +..+.++. .....++++ ++..+++-+ .++.|+.||+.++
T Consensus 279 g~lyv~d~~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 279 SNFYMSDQNLSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp TEEEEEETTTTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT
T ss_pred CEEEEEeCCCCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC
Confidence 568888888899999997643 23333332 357899998 455556666 7889999997532
Q ss_pred CCCCCCCCceeEEEcCC---------------CCCeEEEEEecCCCEEEEEecCCcEEEEeC
Q 001366 989 SHTGPSTNACSLTFSGH---------------TNEKNFVGLSTADGYIACGSESNEVYAYHR 1035 (1092)
Q Consensus 989 ~~~~~~~~~~~~~l~~h---------------~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~ 1035 (1092)
.+.++.++ -.....++++++|.++++-..++.|+.+.+
T Consensus 356 ---------~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 356 ---------YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ---------EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred ---------EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 23344333 245788999999888888888888888754
No 461
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.14 E-value=6.2e-10 Score=128.31 Aligned_cols=177 Identities=14% Similarity=0.113 Sum_probs=132.6
Q ss_pred cEEEEEEecCCCCEEEEEeCCCcEEEEecCCCc-----------eeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEE
Q 001366 873 RAWSVDFSQVHPTKLASGSDDCSVKLWNINEKN-----------SLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCY 941 (1092)
Q Consensus 873 ~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~-----------~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vw 941 (1092)
.+..+++++ ...++++|+.|+ +++|++.... ....+.... |..|+| ++. +|+++ .++.|++|
T Consensus 39 ~~nlLais~-~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~-~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGD-QVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEET-TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETT-EEEEE-ESSEEEEE
T ss_pred cccEEEEcC-CCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCC-EEEEE-cCCcEEEE
Confidence 588999999 778899999885 6669876433 223445566 999999 664 77777 88999999
Q ss_pred EcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEE
Q 001366 942 DLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYI 1021 (1092)
Q Consensus 942 Dlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~l 1021 (1092)
|+++... ......|...+.++.+.++. +++++.||.|.+||+... .... +...|.+++|||+| +
T Consensus 112 dv~sl~~-~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~--------~~~~----~~~~Vs~v~WSpkG--~ 175 (388)
T 1xip_A 112 DLEELSE-FRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTK--------STKQ----LAQNVTSFDVTNSQ--L 175 (388)
T ss_dssp ESSSTTC-EEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTC--------CEEE----EEESEEEEEECSSE--E
T ss_pred Echhhhc-cCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCC--------cccc----ccCCceEEEEcCCc--e
Confidence 9998763 34566778889999887443 888999999999999842 2221 34589999999999 6
Q ss_pred EEEecCCcEEEEeCCCCCc--eeeeeccccCCCCCcccc--CCCCCCEEEEEEeCCCCEEEE
Q 001366 1022 ACGSESNEVYAYHRSLPMP--ITSYKFGSIDPISGKETD--DDNGLFVSSVCWRRRSDMVVA 1079 (1092)
Q Consensus 1022 asgs~Dg~I~Iwd~~~~~~--i~~~~~~~~~~i~~~~~~--~~h~~~V~sva~spd~~~Las 1079 (1092)
+.|..||+|++|+...... ...+.. +.... .+|...|.+|+|.+++.+|++
T Consensus 176 ~vg~~dg~i~~~~~~~~~~~~k~~I~~-------Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 176 AVLLKDRSFQSFAWRNGEMEKQFEFSL-------PSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECC-------CHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEEcCCcEEEEcCCCccccccceecC-------CcccccccCCCeeEEEEEEecCCeEEEE
Confidence 7899999999997765553 333321 01111 146788999999999999886
No 462
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.13 E-value=5.9e-08 Score=106.35 Aligned_cols=234 Identities=6% Similarity=-0.064 Sum_probs=163.5
Q ss_pred CCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEE-EeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCce
Q 001366 828 RSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVS-HYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNS 906 (1092)
Q Consensus 828 ~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~-~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~ 906 (1092)
...+.++++.++ +.+.++...++.|.+||.. ++... .+..+...+.++++.+ ++.++++...++.|..||.. ++.
T Consensus 19 ~~~p~~i~~d~~-g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 19 DSGPYGITSSED-GKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSS-LGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TCCEEEEEECTT-SCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCcceeeECCC-CCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECC-CCCEEEEecCCCeEEEECCC-CCe
Confidence 457789999987 7777777678999999987 55433 2223346789999998 78877777778899999988 554
Q ss_pred eeeEe---cCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEE
Q 001366 907 LATIK---NIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKL 982 (1092)
Q Consensus 907 l~~l~---~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~v 982 (1092)
..+. ....+.++++.+++. ++++...++.|..||.. ++.....+......+..+++. ++..+++...++.|.+
T Consensus 95 -~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 171 (300)
T 2qc5_A 95 -TEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGR 171 (300)
T ss_dssp -EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred -EEecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEE
Confidence 3333 235689999999885 66666668899999987 433222233345678899997 4554455555788999
Q ss_pred EEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCC
Q 001366 983 WDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNG 1062 (1092)
Q Consensus 983 WDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~ 1062 (1092)
||.. .. ........+...+..++++++|.++++....+.|.+|+. .+.... +.. ..+.
T Consensus 172 ~~~~-g~-------~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~------------~~~~ 229 (300)
T 2qc5_A 172 ITNT-GK-------LEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE-YDI------------PTPN 229 (300)
T ss_dssp ECTT-CC-------EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EEC------------SSTT
T ss_pred ECCC-Cc-------EEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE-EEC------------CCCC
Confidence 9873 21 111222234556889999999988887777788999987 343222 211 1224
Q ss_pred CCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1063 LFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1063 ~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
..+.+|++.+++.+.++...++.|.+|+
T Consensus 230 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 230 ARPHAITAGKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred CCceEEEECCCCCEEEeccCCCeEEEEC
Confidence 5689999999999887777778888876
No 463
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.13 E-value=9e-08 Score=110.36 Aligned_cols=262 Identities=10% Similarity=-0.011 Sum_probs=169.9
Q ss_pred eEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEe----------CCCcEEEEEcCCCCCCCcccccce--
Q 001366 755 LCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAG----------VSKKIKIFEFNALFNDSVDVYYPA-- 822 (1092)
Q Consensus 755 ~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg----------~D~~I~Iwd~~~~~~~~~~~~~~~-- 822 (1092)
++.+++...+++...+..+ ..+ .++|+|||+++.++. .++.|.+||..+... . ...+.
T Consensus 48 ~v~v~D~~t~~~~~~i~~g-----~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~--~-~~i~~~~ 117 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGG-----FLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP--I-ADIELPD 117 (373)
T ss_pred EEEEEECCCCeEEEEecCC-----CCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE--E-EEEECCC
Confidence 6677887777776555432 233 699999999988876 367899999864211 0 00000
Q ss_pred -eeecCCCCeEEEEEecCCCCEEEEEEC--CCcEEEEECCCCceEEE-eeccCccEEEEEEecCCCCEEEEEeCCCcEEE
Q 001366 823 -VEMSNRSKLSCVCWNNYIKNYLASADY--DGVVKLWDACTGQTVSH-YIEHEKRAWSVDFSQVHPTKLASGSDDCSVKL 898 (1092)
Q Consensus 823 -~~~~h~~~V~~v~~sp~~~~~LaSgs~--DgtV~IWD~~tg~~i~~-l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~i 898 (1092)
....+...-..+.|+|+ +++|++++. ++.|.++| .+++.+.. +.. .. ++.+.|.....+++.+.||.+.+
T Consensus 118 ~~~~~~g~~p~~~~~spD-G~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~ 191 (373)
T 2mad_H 118 APRFDVGPYSWMNANTPN-NADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAK 191 (373)
T ss_pred ccccccCCCccceEECCC-CCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEE
Confidence 00001123357899998 777777764 58899999 99988877 542 22 24555645567788889999999
Q ss_pred EecCCCceeeeEe------cCCc-eEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcc-eEEecC----------CCCCe
Q 001366 899 WNINEKNSLATIK------NIAN-VCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAP-WCVLAG----------HEKAV 960 (1092)
Q Consensus 899 WDl~~~~~l~~l~------~~~~-V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~-~~~l~~----------H~~~V 960 (1092)
||. +++.+.... .... .....+.+++..++++ +..+.+.+.|+...... +..+.- .....
T Consensus 192 vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~ 269 (373)
T 2mad_H 192 TDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGW 269 (373)
T ss_pred EEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEE-cCCceEEEEeccCCcceEeeeeeecCCcccccceecCce
Confidence 999 887764332 1111 1234566666544444 46889999999754321 111110 01223
Q ss_pred EEEEEc-CCCEEEEEEC----------CCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCC-EEEEEe-cC
Q 001366 961 SYVKFL-DSGTLVTAST----------DNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADG-YIACGS-ES 1027 (1092)
Q Consensus 961 ~~v~fs-~~~~L~Sgs~----------Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~-~lasgs-~D 1027 (1092)
..+.++ +++.++.+.. .+.|.++|+. +.+.+.++.. ......++|+|||+ .++++. .+
T Consensus 270 ~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~--------t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~ 340 (373)
T 2mad_H 270 QQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGL--------VGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGT 340 (373)
T ss_pred EeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECC--------CCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCC
Confidence 446677 5566665543 3579999998 3455566643 23578999999999 677766 58
Q ss_pred CcEEEEeCCCCCceee
Q 001366 1028 NEVYAYHRSLPMPITS 1043 (1092)
Q Consensus 1028 g~I~Iwd~~~~~~i~~ 1043 (1092)
+.|.|||..+++.+.+
T Consensus 341 ~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 341 EVLHIYDAGAGDQDQS 356 (373)
T ss_pred CeEEEEECCCCCEEee
Confidence 9999999999998877
No 464
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.12 E-value=3.8e-08 Score=109.35 Aligned_cols=226 Identities=10% Similarity=0.002 Sum_probs=151.8
Q ss_pred CCCEEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEE
Q 001366 779 ANVICSISFDRDE-DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWD 857 (1092)
Q Consensus 779 ~~~V~sl~fspdg-~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD 857 (1092)
....-+..|++++ .++++...++.|..||..+.. . ........+.+++++++ ++++++ . ++.|.+||
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~---~------~~~~~~~~~~~i~~~~d-G~l~v~-~-~~~l~~~d 79 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ---V------QRVTMDAPVSSVALRQS-GGYVAT-I-GTKFCALN 79 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCC---E------EEEECSSCEEEEEEBTT-SSEEEE-E-TTEEEEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCc---E------EEEeCCCceEEEEECCC-CCEEEE-E-CCeEEEEE
Confidence 3345678899964 466666678899999986521 1 11234567999999998 665554 3 57899999
Q ss_pred CCCCceEEEeec----cCccEEEEEEecCCCCEEEEEeCC---------CcEEEEecCC-CceeeeEecCCceEEEEEcc
Q 001366 858 ACTGQTVSHYIE----HEKRAWSVDFSQVHPTKLASGSDD---------CSVKLWNINE-KNSLATIKNIANVCCVQFSA 923 (1092)
Q Consensus 858 ~~tg~~i~~l~~----h~~~V~sv~fsp~~~~~laSgs~D---------g~I~iWDl~~-~~~l~~l~~~~~V~sl~fsp 923 (1092)
..+++....... ....+.++++.| ++.++++...+ ....||.+.. ++...........+.++|+|
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~sp 158 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSL 158 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECT
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcC
Confidence 988764332221 124588999999 78876654322 3345665543 33333333445678999999
Q ss_pred CCCeEEEEEECCCeEEEEEcC--CCCc----ceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCC
Q 001366 924 HSSHLLAFGSADYRTYCYDLR--NARA----PWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTN 996 (1092)
Q Consensus 924 ~~~~~latgs~Dg~I~vwDlr--~~~~----~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~ 996 (1092)
++..++++.+.++.|.+||+. ++.. .+..+..+...+..+++. ++...++....+.|.+||.. ++
T Consensus 159 dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~--------tG 230 (297)
T 3g4e_A 159 DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV--------TG 230 (297)
T ss_dssp TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT--------TC
T ss_pred CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC--------Cc
Confidence 997666777788999999973 3321 122233344567889997 55556666677889999987 35
Q ss_pred ceeEEEcCCCCCeEEEEEe-cCCCEEEEEe
Q 001366 997 ACSLTFSGHTNEKNFVGLS-TADGYIACGS 1025 (1092)
Q Consensus 997 ~~~~~l~~h~~~V~~v~~s-pdg~~lasgs 1025 (1092)
..+..+..+...+++++|. |+++.|..++
T Consensus 231 ~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 231 KRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp CEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred eEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 6677777777789999998 8877554444
No 465
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.10 E-value=5.2e-08 Score=109.93 Aligned_cols=221 Identities=9% Similarity=-0.030 Sum_probs=144.1
Q ss_pred EEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCC
Q 001366 782 ICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACT 860 (1092)
Q Consensus 782 V~sl~fspdg~-~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~t 860 (1092)
..+..|+|++. ++++...++.|.+|+..... . ........+.+++|+++ +.+++++ .+ .|.+||..+
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~---~------~~~~~~~~v~~i~~~~d-g~l~v~~-~~-gl~~~d~~~ 118 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGR---K------TVHALPFMGSALAKISD-SKQLIAS-DD-GLFLRDTAT 118 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTE---E------EEEECSSCEEEEEEEET-TEEEEEE-TT-EEEEEETTT
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCc---E------EEEECCCcceEEEEeCC-CeEEEEE-CC-CEEEEECCC
Confidence 45678999754 56666678899999976421 1 11123467999999997 6666654 44 499999988
Q ss_pred CceEEEeec---c-CccEEEEEEecCCCCEEEEEeC------CCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEE
Q 001366 861 GQTVSHYIE---H-EKRAWSVDFSQVHPTKLASGSD------DCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLA 930 (1092)
Q Consensus 861 g~~i~~l~~---h-~~~V~sv~fsp~~~~~laSgs~------Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~la 930 (1092)
++....... . ...+.++.++| ++.++++... .+.|..+| +++...........+.++|+|++..+++
T Consensus 119 g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv 195 (326)
T 2ghs_A 119 GVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYF 195 (326)
T ss_dssp CCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEE
T ss_pred CcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEE
Confidence 875432221 1 24689999999 7887665542 23454555 4443332233345789999999975556
Q ss_pred EEECCCeEEEEEcC--CC-Cc----ceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEE
Q 001366 931 FGSADYRTYCYDLR--NA-RA----PWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTF 1002 (1092)
Q Consensus 931 tgs~Dg~I~vwDlr--~~-~~----~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l 1002 (1092)
+.+.++.|.+||+. ++ .. .+..+......+..+.+. ++..+++...++.|.+||.. +..+..+
T Consensus 196 ~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~---------g~~~~~i 266 (326)
T 2ghs_A 196 VDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD---------GNHIARY 266 (326)
T ss_dssp EETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT---------CCEEEEE
T ss_pred EECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC---------CCEEEEE
Confidence 66678899999986 44 21 122233344567788887 45555555567899999874 2345566
Q ss_pred cCCCCCeEEEEEe-cCCCEEEEEec
Q 001366 1003 SGHTNEKNFVGLS-TADGYIACGSE 1026 (1092)
Q Consensus 1003 ~~h~~~V~~v~~s-pdg~~lasgs~ 1026 (1092)
..+...+.+++|+ ++++.|+.++.
T Consensus 267 ~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 267 EVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp ECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred ECCCCCcEEEEEecCCCCEEEEEec
Confidence 6666779999998 88876655443
No 466
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.09 E-value=7.6e-09 Score=120.80 Aligned_cols=255 Identities=11% Similarity=0.049 Sum_probs=169.3
Q ss_pred CcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEE----------CCCcEEEEECCCCceEEEeecc
Q 001366 801 KKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASAD----------YDGVVKLWDACTGQTVSHYIEH 870 (1092)
Q Consensus 801 ~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs----------~DgtV~IWD~~tg~~i~~l~~h 870 (1092)
+.|.++|..+.. +... +.. ...+ .+.++|+ +++|+++. .++.|.++|..+++.+..+.--
T Consensus 99 ~~VsVID~~t~~---vv~~---I~v-G~~P--gia~SpD-gk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~ 168 (426)
T 3c75_H 99 TQQFVIDGSTGR---ILGM---TDG-GFLP--HPVAAED-GSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELP 168 (426)
T ss_dssp EEEEEEETTTTE---EEEE---EEE-CSSC--EEEECTT-SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEET
T ss_pred CeEEEEECCCCE---EEEE---EEC-CCCC--ceEECCC-CCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECC
Confidence 689999987521 1111 111 2334 8999999 55555554 4679999999999988877521
Q ss_pred -------CccEEEEEEecCCCCEEEEEeC--CCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEE
Q 001366 871 -------EKRAWSVDFSQVHPTKLASGSD--DCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCY 941 (1092)
Q Consensus 871 -------~~~V~sv~fsp~~~~~laSgs~--Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vw 941 (1092)
......+.|+| ++++++.+.. +++|.+.|+.+++.+.++..... ....|++...+++.+.||.+.+.
T Consensus 169 g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~v~~~~dG~~~~V 244 (426)
T 3c75_H 169 DAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVFYMNCRDGSLARV 244 (426)
T ss_dssp TCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSSEEEE
T ss_pred CccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEEEEEcCCCCEEEE
Confidence 23346789999 8888888764 68899999999999988886442 34456655677778889998888
Q ss_pred EcCCCCcceEE----ecCCCCCe-EEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcC----------C
Q 001366 942 DLRNARAPWCV----LAGHEKAV-SYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG----------H 1005 (1092)
Q Consensus 942 Dlr~~~~~~~~----l~~H~~~V-~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~----------h 1005 (1092)
|+.+.+. ... +.....++ ..+.|. ++..++..+..+.|.+.|+...... .+..+.- .
T Consensus 245 ~~~~~~v-~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~------v~~~~~~~~~~~i~~g~~ 317 (426)
T 3c75_H 245 DFADGET-KVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGAT------FRAPIEALTEAERADDWR 317 (426)
T ss_dssp ECCTTCC-EEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEE------ECCCEESSCTTTGGGTEE
T ss_pred ECCCCcE-EEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceE------Eeeeeeeccccccccccc
Confidence 8844432 211 11111111 123455 4566666677889999998632100 0000000 0
Q ss_pred CCCeEEEEEecCCCEEEEEec----------CCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCC
Q 001366 1006 TNEKNFVGLSTADGYIACGSE----------SNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSD 1075 (1092)
Q Consensus 1006 ~~~V~~v~~spdg~~lasgs~----------Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~ 1075 (1092)
......++++|+++.+..... ++.|.++|..+.+.+.++..+ ...++|+|+||++
T Consensus 318 p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg---------------~~P~gia~spDg~ 382 (426)
T 3c75_H 318 PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG---------------HEIDSINVSQDAE 382 (426)
T ss_dssp ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE---------------EEECEEEECCSSS
T ss_pred cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC---------------CCcCeEEEccCCC
Confidence 111223689999886554431 357999999999999988753 2478999999999
Q ss_pred -EEEEEe-cCCeEEEEEc
Q 001366 1076 -MVVAAN-SSGCIKVLQM 1091 (1092)
Q Consensus 1076 -~Lasgs-~DG~V~vW~l 1091 (1092)
.|++++ .++.|.|+|+
T Consensus 383 ~~lyv~n~~s~~VsVID~ 400 (426)
T 3c75_H 383 PLLYALSAGTQTLHIYDA 400 (426)
T ss_dssp CEEEEEETTTTEEEEEET
T ss_pred EEEEEEcCCCCeEEEEEC
Confidence 899998 5899999986
No 467
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.07 E-value=5.7e-08 Score=107.87 Aligned_cols=226 Identities=11% Similarity=0.024 Sum_probs=151.7
Q ss_pred CeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeee
Q 001366 830 KLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLAT 909 (1092)
Q Consensus 830 ~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~ 909 (1092)
-.-+..|+++.+.++++...++.|..||..+++. ..+. +...+.++++++ ++.++++ . ++.|.+||..+++....
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~-dG~l~v~-~-~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQ-SGGYVAT-I-GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBT-TSSEEEE-E-TTEEEEEETTTTEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECC-CCCEEEE-E-CCeEEEEECCCCcEEEE
Confidence 4468899997567777777889999999988765 3332 456799999999 7775554 4 56799999987764433
Q ss_pred Eec-----CCceEEEEEccCCCeEEEEEEC-----------CCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEE-
Q 001366 910 IKN-----IANVCCVQFSAHSSHLLAFGSA-----------DYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTL- 971 (1092)
Q Consensus 910 l~~-----~~~V~sl~fsp~~~~~latgs~-----------Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L- 971 (1092)
... ...++.++++|+|. ++++... .+.|+.+|.. + . ...+..+......++|+ +++.|
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g-~-~~~~~~~~~~pngi~~spdg~~ly 164 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPD-H-H-VKKYFDQVDISNGLDWSLDHKIFY 164 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTT-S-C-EEEEEEEESBEEEEEECTTSCEEE
T ss_pred EecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECC-C-C-EEEEeeccccccceEEcCCCCEEE
Confidence 222 23488999999996 4443322 2345555543 2 2 22233334456889998 55555
Q ss_pred EEEECCCeEEEEEcC--CCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeecccc
Q 001366 972 VTASTDNKLKLWDLK--RTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSI 1049 (1092)
Q Consensus 972 ~Sgs~Dg~I~vWDl~--~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~ 1049 (1092)
++.+.++.|.+||+. ++.. ........+..+......++++++|.+.++...++.|.+|+..+++.+..+..
T Consensus 165 v~~~~~~~i~~~~~d~~~G~~---~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~--- 238 (297)
T 3g4e_A 165 YIDSLSYSVDAFDYDLQTGQI---SNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL--- 238 (297)
T ss_dssp EEEGGGTEEEEEEECTTTCCE---EEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC---
T ss_pred EecCCCCcEEEEeccCCCCcc---cCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC---
Confidence 455567899999984 1110 00112223333445678899999999888888888999999988888777653
Q ss_pred CCCCCccccCCCCCCEEEEEEe-CCCCEEEEEe
Q 001366 1050 DPISGKETDDDNGLFVSSVCWR-RRSDMVVAAN 1081 (1092)
Q Consensus 1050 ~~i~~~~~~~~h~~~V~sva~s-pd~~~Lasgs 1081 (1092)
+...+++++|. |+++.|..++
T Consensus 239 -----------p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 239 -----------PVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp -----------SSSBEEEEEEESGGGCEEEEEE
T ss_pred -----------CCCCceEEEEeCCCCCEEEEEc
Confidence 23468999999 8887765544
No 468
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.07 E-value=1.2e-08 Score=127.43 Aligned_cols=239 Identities=13% Similarity=0.060 Sum_probs=154.7
Q ss_pred CCCCeEEEEEecCCCCEEEE-EE----CCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCc------
Q 001366 827 NRSKLSCVCWNNYIKNYLAS-AD----YDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCS------ 895 (1092)
Q Consensus 827 h~~~V~~v~~sp~~~~~LaS-gs----~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~------ 895 (1092)
+...+..++|+|+ +++||- .+ .+.+|++||+.+++.+... .+.....+++|+ |++.|+.++.|..
T Consensus 127 ~~~~l~~~~~SpD-g~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws--Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 127 GTTALDQLSFSRD-GRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL--GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp SCCEEEEEEECTT-SSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE--TTTEEEEEESSCCC-----
T ss_pred CcEEEEEEEECCC-CCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe--CCCEEEEEEecCccccccc
Confidence 3456888999998 776663 32 2357999999999865431 111123578898 6677777777743
Q ss_pred -------EEEEecCCCce--eeeEec----CCceEEEEEccCCCeEEEEEEC---CCeEEEEEcCCCCcceEEecCCCCC
Q 001366 896 -------VKLWNINEKNS--LATIKN----IANVCCVQFSAHSSHLLAFGSA---DYRTYCYDLRNARAPWCVLAGHEKA 959 (1092)
Q Consensus 896 -------I~iWDl~~~~~--l~~l~~----~~~V~sl~fsp~~~~~latgs~---Dg~I~vwDlr~~~~~~~~l~~H~~~ 959 (1092)
|++|++.++.. ...+.. ...+.++.|+|+|..++++.+. +..|+++|+.++......+..+...
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 99999987653 223332 2347889999999865555543 3589999998765445566666666
Q ss_pred eEEEEEcCCCEEE-EEECC---CeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEec-CC--cEEE
Q 001366 960 VSYVKFLDSGTLV-TASTD---NKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSE-SN--EVYA 1032 (1092)
Q Consensus 960 V~~v~fs~~~~L~-Sgs~D---g~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~-Dg--~I~I 1032 (1092)
......++++.|+ ++..+ +.|.+||+.+... .....+..|...+. .|++++++|+.... ++ .|++
T Consensus 283 ~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~------~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~ 354 (693)
T 3iuj_A 283 DVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGP------AHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQ 354 (693)
T ss_dssp CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG------GGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEE
T ss_pred eEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc------cccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEE
Confidence 6665334566554 44443 5799999884321 11345666666665 89999998876664 43 6888
Q ss_pred EeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecC----CeEEEEEc
Q 001366 1033 YHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSS----GCIKVLQM 1091 (1092)
Q Consensus 1033 wd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~D----G~V~vW~l 1091 (1092)
|+...+ ....+.+ .....+..+.+++++..|+....+ +.|..|++
T Consensus 355 ~d~~g~-~~~~l~~-------------p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 355 FDYEGK-RVREVAL-------------PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp ECTTSC-EEEEECC-------------SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred EECCCC-eeEEeec-------------CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 987633 3333322 123457778888888766655444 67777764
No 469
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.05 E-value=8.6e-09 Score=128.84 Aligned_cols=240 Identities=16% Similarity=0.196 Sum_probs=153.7
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe-----CCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCC
Q 001366 777 NSANVICSISFDRDEDHFAAAG-----VSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDG 851 (1092)
Q Consensus 777 ~h~~~V~sl~fspdg~~latgg-----~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~Dg 851 (1092)
+|...+.+++|||||++||-+. ...+|+|||+.+... .. ... +..+...++|+ | ++.|+.++.|.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~--~~----~~~--~~~k~~~~~Ws-D-g~~l~y~~~~~ 195 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQP--LE----TPL--KDVKFSGISWL-G-NEGFFYSSYDK 195 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSE--EE----EEE--EEEESCCCEEE-T-TTEEEEEESSC
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCC--Cc----ccc--CCceeccEEEe-C-CCEEEEEEecC
Confidence 3556788899999999998543 235799999876321 11 111 11123567899 7 77788887775
Q ss_pred c-------------EEEEECCCCce--EEEe--ec-cCccEEEEEEecCCCCEEEE-EeC---CCcEEEEecCCCc-eee
Q 001366 852 V-------------VKLWDACTGQT--VSHY--IE-HEKRAWSVDFSQVHPTKLAS-GSD---DCSVKLWNINEKN-SLA 908 (1092)
Q Consensus 852 t-------------V~IWD~~tg~~--i~~l--~~-h~~~V~sv~fsp~~~~~laS-gs~---Dg~I~iWDl~~~~-~l~ 908 (1092)
. |++|++.+++. ...+ .. |...+.++.|+| +++.|+. .+. +..|.+||+.++. ...
T Consensus 196 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~ 274 (693)
T 3iuj_A 196 PDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLL 274 (693)
T ss_dssp CC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCE
T ss_pred cccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceE
Confidence 4 99999987652 3333 33 455578999999 7776643 332 3589999998764 344
Q ss_pred eEe-cCCceEEEEEccCCCeEEEEEECC---CeEEEEEcCCCCc-ceEEecCCCCCeEEEEEc-CCCEEEEEE-CCC--e
Q 001366 909 TIK-NIANVCCVQFSAHSSHLLAFGSAD---YRTYCYDLRNARA-PWCVLAGHEKAVSYVKFL-DSGTLVTAS-TDN--K 979 (1092)
Q Consensus 909 ~l~-~~~~V~sl~fsp~~~~~latgs~D---g~I~vwDlr~~~~-~~~~l~~H~~~V~~v~fs-~~~~L~Sgs-~Dg--~ 979 (1092)
.+. ........ |++++..+++.+..+ +.|..+|+.++.. .+..+..|...+. .|+ .++.|+... .++ .
T Consensus 275 ~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~ 351 (693)
T 3iuj_A 275 TVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATAR 351 (693)
T ss_dssp EEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEE
T ss_pred EEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeE
Confidence 444 33334444 677776666666554 6899999987643 2345556665555 555 566666555 454 6
Q ss_pred EEEEEcCCCCCCCCCCCceeEEEc-CCCCCeEEEEEecCCCEEEEEecC----CcEEEEeCCCCC
Q 001366 980 LKLWDLKRTSHTGPSTNACSLTFS-GHTNEKNFVGLSTADGYIACGSES----NEVYAYHRSLPM 1039 (1092)
Q Consensus 980 I~vWDl~~~~~~~~~~~~~~~~l~-~h~~~V~~v~~spdg~~lasgs~D----g~I~Iwd~~~~~ 1039 (1092)
|.+||+.. .....+. .....+..++++++++.|+....+ ++|+.||+.+++
T Consensus 352 l~~~d~~g---------~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 352 VEQFDYEG---------KRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEECTTS---------CEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EEEEECCC---------CeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 88888762 2233333 234456677788888766555444 789999987765
No 470
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.04 E-value=6.3e-09 Score=118.34 Aligned_cols=270 Identities=7% Similarity=0.007 Sum_probs=168.0
Q ss_pred CCEEEEEEcCCCCEEEEEe--CCCcEEEEEcCCCCCCCcccccce---eeecCCCCeEEEEEecCCCCEEEEEEC-----
Q 001366 780 NVICSISFDRDEDHFAAAG--VSKKIKIFEFNALFNDSVDVYYPA---VEMSNRSKLSCVCWNNYIKNYLASADY----- 849 (1092)
Q Consensus 780 ~~V~sl~fspdg~~latgg--~D~~I~Iwd~~~~~~~~~~~~~~~---~~~~h~~~V~~v~~sp~~~~~LaSgs~----- 849 (1092)
..++.|+++++|+++++.. .++.++||.+... .. ..++. ....+-..+.+++++++ +.++++-..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g---~~-~~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D~g~~~~~ 91 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQD---GL-IPFPPQSGNAIITFDTVLGIKSDGN-GIVWMLDNGNQSKS 91 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETT---EE-EESCCCCSSCCCCCSCEEEEEECSS-SEEEEEECHHHHTS
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCC---Ce-ecCCCcccCcccceeEeeEEEEcCC-CcEEEEcCCCCcCC
Confidence 5788999999999999864 2343667766421 11 11111 11234567999999997 665554433
Q ss_pred CCcEEEEECCCCceEEEeecc------CccEEEEEEecCCCCEEEEEe---CCCcEEEEecCCCceeeeEecCCce--EE
Q 001366 850 DGVVKLWDACTGQTVSHYIEH------EKRAWSVDFSQVHPTKLASGS---DDCSVKLWNINEKNSLATIKNIANV--CC 918 (1092)
Q Consensus 850 DgtV~IWD~~tg~~i~~l~~h------~~~V~sv~fsp~~~~~laSgs---~Dg~I~iWDl~~~~~l~~l~~~~~V--~s 918 (1092)
++.|.+||+.+++.+..+... ...+..+++.+.++..+++.+ .++.|.+||+.+++....+..+... ..
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPED 171 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCS
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccc
Confidence 579999999999877766532 234689999974455566665 6889999999988766655421110 01
Q ss_pred EEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCC-eEEEEEcCCCCCCCCCCC
Q 001366 919 VQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDN-KLKLWDLKRTSHTGPSTN 996 (1092)
Q Consensus 919 l~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg-~I~vWDl~~~~~~~~~~~ 996 (1092)
..+.+++ ..+.+.+.++.++.|. ..+..|+|+ +++.|+.+..++ .|..++............
T Consensus 172 ~~~~~~g-~~~~~~~~~g~~~~~~---------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~ 235 (343)
T 2qe8_A 172 IDLVIDG-VPVQIGQPDGTVIRPH---------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDA 235 (343)
T ss_dssp CCCEETT-EECBEECTTSCEECCC---------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHH
T ss_pred cceeECC-EEEEeccCCCceecee---------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChh
Confidence 3444555 3566666777665542 135779998 556788777766 454444321000000000
Q ss_pred cee--EEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCC
Q 001366 997 ACS--LTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRS 1074 (1092)
Q Consensus 997 ~~~--~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~ 1074 (1092)
... ....++......++++++|.++++...++.|.+|+...++...... ..+...+.+|+|.+++
T Consensus 236 ~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~-------------~~~~~~p~~va~~~~g 302 (343)
T 2qe8_A 236 ELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVT-------------DEKLSWTDSFNFGSDG 302 (343)
T ss_dssp HHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEE-------------CGGGSCEEEEEECTTS
T ss_pred hhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEE-------------CCceecCCeeEECCCC
Confidence 000 0122334455679999999999999999999999984454222111 0123468999999999
Q ss_pred CEEEEEecC
Q 001366 1075 DMVVAANSS 1083 (1092)
Q Consensus 1075 ~~Lasgs~D 1083 (1092)
.++++.+..
T Consensus 303 ~l~v~~~~~ 311 (343)
T 2qe8_A 303 YLYFDCNQL 311 (343)
T ss_dssp CEEEEECCG
T ss_pred cEEEEeCcc
Confidence 988887744
No 471
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.03 E-value=5.3e-08 Score=111.83 Aligned_cols=265 Identities=12% Similarity=0.033 Sum_probs=171.8
Q ss_pred CCeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEe----------CCCcEEEEEcCCCCCCCcccccce
Q 001366 753 DGLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAG----------VSKKIKIFEFNALFNDSVDVYYPA 822 (1092)
Q Consensus 753 D~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg----------~D~~I~Iwd~~~~~~~~~~~~~~~ 822 (1092)
++.+.+.+...+++.+.+..+ ..+ . ++++|||+++.+++ .++.|.+||..+.. +.. .
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG-----~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~---v~~---~ 124 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGG-----FLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL---PTA---D 124 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEEC-----SSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC---EEE---E
T ss_pred CCEEEEEECCCCeEEEEEECC-----CCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe---EEE---E
Confidence 457778888888888877653 223 3 89999999877665 36789999987621 111 1
Q ss_pred eeecC------CCCeEEEEEecCCCCEEEEEEC--CCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCC
Q 001366 823 VEMSN------RSKLSCVCWNNYIKNYLASADY--DGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDC 894 (1092)
Q Consensus 823 ~~~~h------~~~V~~v~~sp~~~~~LaSgs~--DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg 894 (1092)
+..+. ...-..+.++|+ +++++++.. +++|.++|+.+++.+.++..-. + ..+.|.....+++.+.||
T Consensus 125 I~v~~g~r~~~g~~P~~~a~spD-Gk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~--~~~~P~g~~~~~~~~~DG 199 (386)
T 3sjl_D 125 IELPDAPRFLVGTYPWMTSLTPD-GKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C--YHIFPTAPDTFFMHCRDG 199 (386)
T ss_dssp EEETTCCCCCBSCCGGGEEECTT-SSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTS
T ss_pred EECCCccccccCCCCceEEEcCC-CCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c--ceeecCCCceeEEECCCC
Confidence 11111 123457899998 777777664 6899999999999988885322 1 223353566788889999
Q ss_pred cEEEEecCC-CceeeeEec-----CCce-EEEEEc-cCCCeEEEEEECCCeEEEEEcCCCCc-ceEEec---------C-
Q 001366 895 SVKLWNINE-KNSLATIKN-----IANV-CCVQFS-AHSSHLLAFGSADYRTYCYDLRNARA-PWCVLA---------G- 955 (1092)
Q Consensus 895 ~I~iWDl~~-~~~l~~l~~-----~~~V-~sl~fs-p~~~~~latgs~Dg~I~vwDlr~~~~-~~~~l~---------~- 955 (1092)
++.+.++.+ ++...+... ...+ ....|. ++| .++..+.+|.|+++|+.+... ...... +
T Consensus 200 ~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG--~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~ 277 (386)
T 3sjl_D 200 SLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG--RLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGW 277 (386)
T ss_dssp CEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT--EEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTE
T ss_pred CEEEEECCCCCeEEEeecceeccccccccccceeEcCCC--cEEEEeCCCEEEEEECCCCcceeecceeccccccccccc
Confidence 999999986 554322111 1122 124564 566 344466789999999976532 111110 0
Q ss_pred CCCCeEEEEEc-CCCEEEEEEC----------CCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCC-EEEE
Q 001366 956 HEKAVSYVKFL-DSGTLVTAST----------DNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADG-YIAC 1023 (1092)
Q Consensus 956 H~~~V~~v~fs-~~~~L~Sgs~----------Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~-~las 1023 (1092)
.......++++ +++.++.... .+.|.+.|+. +.+.+..+.. ...++.+++++|++ +|++
T Consensus 278 ~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~--------t~kv~~~i~v-g~~~~~lavs~D~~~~ly~ 348 (386)
T 3sjl_D 278 RPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAK--------TGERLAKFEM-GHEIDSINVSQDEKPLLYA 348 (386)
T ss_dssp EECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETT--------TCCEEEEEEE-EEEECEEEECSSSSCEEEE
T ss_pred cCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECC--------CCeEEEEEEC-CCCcceEEECCCCCeEEEE
Confidence 11122345566 5666665442 2579999998 3455665542 13678999999997 5555
Q ss_pred -EecCCcEEEEeCCCCCceeeeec
Q 001366 1024 -GSESNEVYAYHRSLPMPITSYKF 1046 (1092)
Q Consensus 1024 -gs~Dg~I~Iwd~~~~~~i~~~~~ 1046 (1092)
...++.|.|+|..+++.+.++..
T Consensus 349 tn~~~~~VsViD~~t~k~~~~i~~ 372 (386)
T 3sjl_D 349 LSTGDKTLYIHDAESGEELRSVNQ 372 (386)
T ss_dssp EETTTTEEEEEETTTCCEEEEECC
T ss_pred EcCCCCeEEEEECCCCcEEEEecC
Confidence 45689999999999999988863
No 472
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.01 E-value=3e-07 Score=103.70 Aligned_cols=223 Identities=9% Similarity=-0.037 Sum_probs=147.1
Q ss_pred eEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeE
Q 001366 831 LSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATI 910 (1092)
Q Consensus 831 V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l 910 (1092)
..+..|+|+.+.++++...++.|..||..+++.. .+. +...+.++.|.+ ++.++++. .+ .|.+||..+++.....
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~-dg~l~v~~-~~-gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKIS-DSKQLIAS-DD-GLFLRDTATGVLTLHA 125 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEE-TTEEEEEE-TT-EEEEEETTTCCEEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeC-CCeEEEEE-CC-CEEEEECCCCcEEEEe
Confidence 4578899975667777778899999999877543 333 356799999999 77766654 44 4999999887654322
Q ss_pred ec-----CCceEEEEEccCCCeEEEEEEC------CCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEE-EEECC
Q 001366 911 KN-----IANVCCVQFSAHSSHLLAFGSA------DYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLV-TASTD 977 (1092)
Q Consensus 911 ~~-----~~~V~sl~fsp~~~~~latgs~------Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~-Sgs~D 977 (1092)
.. ...+++++++|+|. ++++... .+.|+.+| +++ +..+..+......++|+ +++.|+ +.+.+
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~--~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGK--VTKLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTE--EEEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred eCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCc--EEEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 21 13588999999996 4444332 35677777 332 22222333457789998 555554 44557
Q ss_pred CeEEEEEcC--CC-CCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCC
Q 001366 978 NKLKLWDLK--RT-SHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISG 1054 (1092)
Q Consensus 978 g~I~vWDl~--~~-~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~ 1054 (1092)
+.|.+||+. ++ ... .......+.........++++++|.++++...++.|.+|+. .++.+..+..
T Consensus 201 ~~I~~~d~~~~~Gl~~~---~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~-------- 268 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTG---KAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV-------- 268 (326)
T ss_dssp CEEEEEEBCTTTCCBSS---CCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC--------
T ss_pred CEEEEEEcccccCCccc---CceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEEC--------
Confidence 899999986 22 110 11122233333445678999999998887777788999987 4655554432
Q ss_pred ccccCCCCCCEEEEEEe-CCCCEEEEEe
Q 001366 1055 KETDDDNGLFVSSVCWR-RRSDMVVAAN 1081 (1092)
Q Consensus 1055 ~~~~~~h~~~V~sva~s-pd~~~Lasgs 1081 (1092)
+...+.+++|+ +++..|+.++
T Consensus 269 ------~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 269 ------PGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp ------SCSBEEEEEEESTTSCEEEEEE
T ss_pred ------CCCCcEEEEEecCCCCEEEEEe
Confidence 23468999999 8887765444
No 473
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.01 E-value=2.7e-11 Score=138.73 Aligned_cols=68 Identities=10% Similarity=0.014 Sum_probs=57.1
Q ss_pred CcccccCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhhcCccccCCCCCCeEEccCC----------cEEEecc
Q 001366 304 LRQGSSDHGVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN----------QVKYIGP 373 (1092)
Q Consensus 304 ~~~~~~~~GgsL~~~l~~~~~~~~~~~~~~i~~qil~~l~~lHs~gIvHrDLKP~Nill~~~~----------~vkl~Df 373 (1092)
-++|||++|++|.+++. ..+...++.||+.+|.|||++|||||||||.|||+++++ .+.+|||
T Consensus 187 ~LVME~i~G~~L~~l~~-------~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~ 259 (397)
T 4gyi_A 187 TIVMSLVDALPMRQVSS-------VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXF 259 (397)
T ss_dssp EEEEECCSCEEGGGCCC-------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCC
T ss_pred eEEEEecCCccHhhhcc-------cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEe
Confidence 35899999999976532 124567899999999999999999999999999999877 3889999
Q ss_pred ccccc
Q 001366 374 IIQKE 378 (1092)
Q Consensus 374 g~~~~ 378 (1092)
+.+-.
T Consensus 260 ~Q~V~ 264 (397)
T 4gyi_A 260 PQMVS 264 (397)
T ss_dssp TTCEE
T ss_pred CCccc
Confidence 86654
No 474
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.97 E-value=8.5e-08 Score=106.82 Aligned_cols=225 Identities=9% Similarity=-0.021 Sum_probs=146.6
Q ss_pred CCCCEEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEE
Q 001366 778 SANVICSISFDRDED-HFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLW 856 (1092)
Q Consensus 778 h~~~V~sl~fspdg~-~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IW 856 (1092)
......+..|+|+|+ +++++..++.|..|+.... . .....+...+.+++|+++ ++++++...++.|.+|
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~----~-----~~~~~~~~~~~gl~~d~d-G~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT----V-----DVLLDATAFTNGNAVDAQ-QRLVHCEHGRRAITRS 112 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSC----E-----EEEEESCSCEEEEEECTT-SCEEEEETTTTEEEEE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCC----E-----EEEeCCCCccceeeECCC-CCEEEEECCCCEEEEE
Confidence 344567789999998 5667767889999986421 1 112234567899999997 7766665556889999
Q ss_pred ECCCCceEEEeecc-----CccEEEEEEecCCCCEEEE----EeC-------------CCcEEEEecCCCceeeeEecCC
Q 001366 857 DACTGQTVSHYIEH-----EKRAWSVDFSQVHPTKLAS----GSD-------------DCSVKLWNINEKNSLATIKNIA 914 (1092)
Q Consensus 857 D~~tg~~i~~l~~h-----~~~V~sv~fsp~~~~~laS----gs~-------------Dg~I~iWDl~~~~~l~~l~~~~ 914 (1092)
|.. ++.. .+..+ ...+.++.+.+ ++.+++| |.. .+.|..||..+++..... ...
T Consensus 113 ~~~-g~~~-~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~ 188 (305)
T 3dr2_A 113 DAD-GQAH-LLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLD 188 (305)
T ss_dssp CTT-SCEE-EEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EES
T ss_pred CCC-CCEE-EEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCC
Confidence 985 5532 22211 13467899999 8888876 332 256777887767654433 445
Q ss_pred ceEEEEEccCCCeEEEEEECC------CeEEEEEcCCCCcc-eEE-ecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcC
Q 001366 915 NVCCVQFSAHSSHLLAFGSAD------YRTYCYDLRNARAP-WCV-LAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLK 986 (1092)
Q Consensus 915 ~V~sl~fsp~~~~~latgs~D------g~I~vwDlr~~~~~-~~~-l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~ 986 (1092)
..+.++|+|++. .|+++... +.|++||+...... ... .......+..+++.+.+.|..++.+ .|.+||..
T Consensus 189 ~p~gl~~spdg~-~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~-gv~~~~~~ 266 (305)
T 3dr2_A 189 HPNGLAFSPDEQ-TLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT-GVCVFDSD 266 (305)
T ss_dssp SEEEEEECTTSS-EEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS-EEEEECTT
T ss_pred CCcceEEcCCCC-EEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC-cEEEECCC
Confidence 678899999996 44444443 78999998754310 011 1112334556788744446656554 49999875
Q ss_pred CCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCC
Q 001366 987 RTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESN 1028 (1092)
Q Consensus 987 ~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg 1028 (1092)
+..+..+..+. .+..++|+++++.|..++.++
T Consensus 267 ---------g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 267 ---------GQLLGHIPTPG-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp ---------SCEEEEEECSS-CCCEEEECTTSCEEEEEETTE
T ss_pred ---------CCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCe
Confidence 34455555444 578899999988888777654
No 475
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.92 E-value=2.2e-07 Score=103.49 Aligned_cols=230 Identities=8% Similarity=0.015 Sum_probs=151.4
Q ss_pred CCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCce
Q 001366 827 NRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNS 906 (1092)
Q Consensus 827 h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~ 906 (1092)
......+..|++++..++++...++.|..|+. +++ ...+..+...+.++++.+ +++++++...++.|.+||.. ++.
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEECCC-CCE
Confidence 34556789999983337777778899999998 454 445555677789999999 78866665566889999986 543
Q ss_pred eeeEec-----CCceEEEEEccCCCeEEEE----EEC-------------CCeEEEEEcCCCCcceEEecCCCCCeEEEE
Q 001366 907 LATIKN-----IANVCCVQFSAHSSHLLAF----GSA-------------DYRTYCYDLRNARAPWCVLAGHEKAVSYVK 964 (1092)
Q Consensus 907 l~~l~~-----~~~V~sl~fsp~~~~~lat----gs~-------------Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~ 964 (1092)
...... ...++.++++|+|. ++++ |.. .+.|+.||..+++.. .+. +......++
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~--~~~-~~~~p~gl~ 194 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ--RMA-DLDHPNGLA 194 (305)
T ss_dssp EEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE--EEE-EESSEEEEE
T ss_pred EEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE--EEe-cCCCCcceE
Confidence 222211 13467899999996 5554 332 357888887655432 222 344578899
Q ss_pred Ec-CCCEEEEEECC------CeEEEEEcCCCCCCCCCCCceeEEE-cCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCC
Q 001366 965 FL-DSGTLVTASTD------NKLKLWDLKRTSHTGPSTNACSLTF-SGHTNEKNFVGLSTADGYIACGSESNEVYAYHRS 1036 (1092)
Q Consensus 965 fs-~~~~L~Sgs~D------g~I~vWDl~~~~~~~~~~~~~~~~l-~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~ 1036 (1092)
|+ ++..|+.+... +.|.+||+..... .....+ .........++++++|.+.++. .+ .|.+|+.
T Consensus 195 ~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l------~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~- 265 (305)
T 3dr2_A 195 FSPDEQTLYVSQTPEQGHGSVEITAFAWRDGAL------HDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDS- 265 (305)
T ss_dssp ECTTSSEEEEEECCC---CCCEEEEEEEETTEE------EEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECT-
T ss_pred EcCCCCEEEEEecCCcCCCCCEEEEEEecCCCc------cCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECC-
Confidence 98 55667777665 7899999873210 001111 1122334568899999855544 44 4999987
Q ss_pred CCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEE
Q 001366 1037 LPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKV 1088 (1092)
Q Consensus 1037 ~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~v 1088 (1092)
.++.+..+.. ...+.+++|.|+++.|..++.++..++
T Consensus 266 ~g~~~~~~~~---------------~~~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 266 DGQLLGHIPT---------------PGTASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp TSCEEEEEEC---------------SSCCCEEEECTTSCEEEEEETTEEEEE
T ss_pred CCCEEEEEEC---------------CCceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 4665555542 113788999999998888877655444
No 476
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.87 E-value=5.7e-08 Score=111.48 Aligned_cols=248 Identities=10% Similarity=-0.040 Sum_probs=159.3
Q ss_pred cEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEE----------CCCcEEEEECCCCceEEEeecc-
Q 001366 802 KIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASAD----------YDGVVKLWDACTGQTVSHYIEH- 870 (1092)
Q Consensus 802 ~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs----------~DgtV~IWD~~tg~~i~~l~~h- 870 (1092)
+|.++|..+.. +.. .+..+ ..+ .+.++|+ +..++++. .+++|.+||..+++.+.++...
T Consensus 47 ~vsvID~~t~~---v~~---~i~vG-~~P--~i~~spD-g~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~ 116 (368)
T 1mda_H 47 ENWVSCAGCGV---TLG---HSLGA-FLS--LAVAGHS-GSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPD 116 (368)
T ss_dssp EEEEEETTTTE---EEE---EEEEC-TTC--EEEECTT-SSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETT
T ss_pred eEEEEECCCCe---EEE---EEeCC-CCC--ceEECCC-CCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCC
Confidence 78899976521 111 11122 344 7999999 55555554 3789999999999999988643
Q ss_pred ------CccEEEEEEecCCCCEEEEEeC--CCcEEE--EecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEE
Q 001366 871 ------EKRAWSVDFSQVHPTKLASGSD--DCSVKL--WNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYC 940 (1092)
Q Consensus 871 ------~~~V~sv~fsp~~~~~laSgs~--Dg~I~i--WDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~v 940 (1092)
......+.++| ++++++.+.. +..|.+ +|+.+ +.++..... +.+.|++...+++.+.|+.+.+
T Consensus 117 ~~~~~~g~~P~~ia~Sp-DGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~---~~~~p~g~~~~~~~~~dg~~~~ 189 (368)
T 1mda_H 117 APRFSVGPRVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC---FHIHPGAAATHYLGSCPASLAA 189 (368)
T ss_dssp SCSCCBSCCTTSEEECT-TSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC---CCCEEEETTEEECCCCTTSCEE
T ss_pred ccccccCCCcceEEEcC-CCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc---eEEccCCCeEEEEEcCCCCEEE
Confidence 12356899999 8888887764 467888 99987 555553322 3345666667777788999888
Q ss_pred EEcCC----CCcceE----EecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcC--------
Q 001366 941 YDLRN----ARAPWC----VLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG-------- 1004 (1092)
Q Consensus 941 wDlr~----~~~~~~----~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~-------- 1004 (1092)
.|+.+ ...... .+.-...+. .+.+++.++..+. +.|.+.|+..... ..+..+.-
T Consensus 190 vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~------~v~~~~~~~~~~~~~~ 259 (368)
T 1mda_H 190 SDLAAAPAAAGIVGAQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGA------TMKAAIDGNESGRKAD 259 (368)
T ss_dssp EECCSSCCCCEECCCCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCC------EEECCCCSSCTHHHHT
T ss_pred EECccccccCCeEEEEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcc------eEEEEEEecccccccc
Confidence 99876 111110 011112233 3556666666666 9999999863210 11111100
Q ss_pred --CCCCeEEEEEecCCCEEEEEec---------CCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCC
Q 001366 1005 --HTNEKNFVGLSTADGYIACGSE---------SNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRR 1073 (1092)
Q Consensus 1005 --h~~~V~~v~~spdg~~lasgs~---------Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd 1073 (1092)
+......++++|+++.+..+.. ++.+.++|..+.+.+.++..| ...++|+|+||
T Consensus 260 ~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg---------------~~p~gi~~s~D 324 (368)
T 1mda_H 260 NFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG---------------HDSDAIIAAQD 324 (368)
T ss_dssp TEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE---------------EEECEEEECCS
T ss_pred ccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC---------------CCcceEEECCC
Confidence 0011112689999987665432 235669999999988887753 24789999999
Q ss_pred CC-EEEEEe-cCCeEEEEEc
Q 001366 1074 SD-MVVAAN-SSGCIKVLQM 1091 (1092)
Q Consensus 1074 ~~-~Lasgs-~DG~V~vW~l 1091 (1092)
++ .+++.+ .++.|.|+|+
T Consensus 325 g~~l~va~~~~~~~VsVID~ 344 (368)
T 1mda_H 325 GASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp SSCEEEEEETTTTEEEEEES
T ss_pred CCEEEEEccCCCCeEEEEEC
Confidence 97 566666 5999999986
No 477
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.81 E-value=5.9e-07 Score=104.80 Aligned_cols=263 Identities=12% Similarity=0.038 Sum_probs=172.7
Q ss_pred CeEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEe----------CCCcEEEEEcCCCCCCCccccccee
Q 001366 754 GLCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAG----------VSKKIKIFEFNALFNDSVDVYYPAV 823 (1092)
Q Consensus 754 ~~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg----------~D~~I~Iwd~~~~~~~~~~~~~~~~ 823 (1092)
+.+.+.+..++++.+.+..+. .+ .++++|||+++.++. .++.|.++|..+.. +... +
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~-----~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~---vv~~---I 165 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGF-----LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL---PIAD---I 165 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECS-----SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC---EEEE---E
T ss_pred CeEEEEECCCCEEEEEEECCC-----CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc---EEEE---E
Confidence 577888888888888887542 24 699999999877765 36789999987521 1111 1
Q ss_pred eec------CCCCeEEEEEecCCCCEEEEEEC--CCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCc
Q 001366 824 EMS------NRSKLSCVCWNNYIKNYLASADY--DGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCS 895 (1092)
Q Consensus 824 ~~~------h~~~V~~v~~sp~~~~~LaSgs~--DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~ 895 (1092)
..+ .......+.|+|+ +++|+.+.. +++|.+.|+.+++.+.++..-. . ....|.....+++.+.||+
T Consensus 166 ~v~g~~r~~~g~~P~~~~~spD-Gk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~ 240 (426)
T 3c75_H 166 ELPDAPRFLVGTYQWMNALTPD-NKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYMNCRDGS 240 (426)
T ss_dssp EETTCCCCCBSCCGGGSEECTT-SSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSS
T ss_pred ECCCccccccCCCcceEEEcCC-CCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEEEcCCCC
Confidence 111 0123456889998 777777764 5899999999999888876322 1 2334433467778888999
Q ss_pred EEEEecCCCceeee----EecC-Cc-eEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcc----eEEecC-------CCC
Q 001366 896 VKLWNINEKNSLAT----IKNI-AN-VCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAP----WCVLAG-------HEK 958 (1092)
Q Consensus 896 I~iWDl~~~~~l~~----l~~~-~~-V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~----~~~l~~-------H~~ 958 (1092)
+.+.|+.+++.... +... .. ...+.|.+++.. ++..+..+.|++.|+...... +..... ...
T Consensus 241 ~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~-~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~ 319 (426)
T 3c75_H 241 LARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGR-LVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPG 319 (426)
T ss_dssp EEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCE-EEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEEC
T ss_pred EEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCE-EEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccC
Confidence 99889866655422 2211 11 123567888864 444567899999998754311 110000 001
Q ss_pred CeEEEEEc-CCCEEEEEEC----------CCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCC-EEEEEe-
Q 001366 959 AVSYVKFL-DSGTLVTAST----------DNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADG-YIACGS- 1025 (1092)
Q Consensus 959 ~V~~v~fs-~~~~L~Sgs~----------Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~-~lasgs- 1025 (1092)
....++++ +++.++.... ++.|.++|+.+ .+.+.++..- ...+.++|+|||+ ++++..
T Consensus 320 g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T--------~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~ 390 (426)
T 3c75_H 320 GWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET--------GERINKIELG-HEIDSINVSQDAEPLLYALSA 390 (426)
T ss_dssp SSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT--------CCEEEEEEEE-EEECEEEECCSSSCEEEEEET
T ss_pred CceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC--------CeEEEEEECC-CCcCeEEEccCCCEEEEEEcC
Confidence 11235677 5566555432 35799999984 4555665422 1467899999999 777777
Q ss_pred cCCcEEEEeCCCCCceeee
Q 001366 1026 ESNEVYAYHRSLPMPITSY 1044 (1092)
Q Consensus 1026 ~Dg~I~Iwd~~~~~~i~~~ 1044 (1092)
.++.|.|+|..+.+.+.++
T Consensus 391 ~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 391 GTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTTEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEECCCCCEEEEe
Confidence 5999999999999998876
No 478
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.78 E-value=8.9e-06 Score=92.95 Aligned_cols=257 Identities=9% Similarity=0.006 Sum_probs=160.1
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCe-EEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEee
Q 001366 790 DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKL-SCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYI 868 (1092)
Q Consensus 790 dg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V-~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~ 868 (1092)
++..+.+++.++.|..+|..+.. ..... .....+ ...... +..++.++.++.|..+|..+|+.+..+.
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~---~~W~~-----~~~~~~~~~p~~~---~~~v~v~~~~g~l~~~d~~tG~~~W~~~ 170 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGT---VAWQT-----KVAGEALSRPVVS---DGLVLIHTSNGQLQALNEADGAVKWTVN 170 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCC---EEEEE-----ECSSCCCSCCEEE---TTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCC---EEEEE-----eCCCceEcCCEEE---CCEEEEEcCCCeEEEEECCCCcEEEEEe
Confidence 35677778889999999976521 11110 001111 111122 3578888899999999999999887776
Q ss_pred ccCccE-----EEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCce-----E---EEEEcc--CCCeEEEEEE
Q 001366 869 EHEKRA-----WSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANV-----C---CVQFSA--HSSHLLAFGS 933 (1092)
Q Consensus 869 ~h~~~V-----~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V-----~---sl~fsp--~~~~~latgs 933 (1092)
...... ...... +..++.++.++.+..+|..+++.+......... . .+...| .+ ..+++++
T Consensus 171 ~~~~~~~~~~~~~~~~~---~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~v~~~~ 246 (376)
T 3q7m_A 171 LDMPSLSLRGESAPTTA---FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVN-GVVFALA 246 (376)
T ss_dssp CCC-----CCCCCCEEE---TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEET-TEEEEEC
T ss_pred CCCCceeecCCCCcEEE---CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEEC-CEEEEEe
Confidence 432211 122222 356788888999999999999998877633210 0 011111 12 2677788
Q ss_pred CCCeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcC-CCCCeEEE
Q 001366 934 ADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG-HTNEKNFV 1012 (1092)
Q Consensus 934 ~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~-h~~~V~~v 1012 (1092)
.++.++.+|..+++..+.. . ......+.. .++.++.++.++.|..+|..+ +..+..... ....+...
T Consensus 247 ~~g~l~~~d~~tG~~~w~~-~--~~~~~~~~~-~~~~l~~~~~~g~l~~~d~~t--------G~~~w~~~~~~~~~~~~~ 314 (376)
T 3q7m_A 247 YNGNLTALDLRSGQIMWKR-E--LGSVNDFIV-DGNRIYLVDQNDRVMALTIDG--------GVTLWTQSDLLHRLLTSP 314 (376)
T ss_dssp TTSCEEEEETTTCCEEEEE-C--CCCEEEEEE-ETTEEEEEETTCCEEEEETTT--------CCEEEEECTTTTSCCCCC
T ss_pred cCcEEEEEECCCCcEEeec-c--CCCCCCceE-ECCEEEEEcCCCeEEEEECCC--------CcEEEeecccCCCcccCC
Confidence 8999999999988754433 2 223444444 467888889999999999984 334444431 11112222
Q ss_pred EEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1013 GLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1013 ~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
.. .+..|+.++.+|.|++||..+++.+....... ......... .+..|+.++.+|.|..|+
T Consensus 315 ~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~-------------~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 315 VL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDS-------------SGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCT-------------TCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred EE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCC-------------CcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 22 35688889999999999999999887765310 000111111 255788889999999987
No 479
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.75 E-value=3.4e-06 Score=96.41 Aligned_cols=262 Identities=11% Similarity=0.005 Sum_probs=158.5
Q ss_pred CCEEEEEeCCCcEEEEEcCCCCCCCcccccceee-----ecCCCCeEE-EEEecCCCCEEEEEECCCcEEEEECCCCceE
Q 001366 791 EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVE-----MSNRSKLSC-VCWNNYIKNYLASADYDGVVKLWDACTGQTV 864 (1092)
Q Consensus 791 g~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~-----~~h~~~V~~-v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i 864 (1092)
+..+.+++.++.|..||..+... ........ ......+.+ +... +..++.++.++.|..+|..+|+.+
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~---~W~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~v~~~~g~l~a~d~~tG~~~ 126 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKE---IWSVSLAEKDGWFSKEPALLSGGVTVS---GGHVYIGSEKAQVYALNTSDGTVA 126 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCE---EEEEECCC---CCSCCCCCEEEEEEEE---TTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCeEEEEEccCCce---eeeecCccccccccccCcccccCceEe---CCEEEEEcCCCEEEEEECCCCCEE
Confidence 56677777788899998764211 00000000 000222322 2222 457888889999999999999988
Q ss_pred EEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecCCceE------EEEEccCCCeEEEEEECCCeE
Q 001366 865 SHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNIANVC------CVQFSAHSSHLLAFGSADYRT 938 (1092)
Q Consensus 865 ~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~------sl~fsp~~~~~latgs~Dg~I 938 (1092)
..+............. +..++.++.++.|..+|..+++.+..+.....+. ..... ++ .+++++.++.|
T Consensus 127 W~~~~~~~~~~~p~~~---~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~--~v~~g~~~g~l 200 (376)
T 3q7m_A 127 WQTKVAGEALSRPVVS---DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FG--AAVVGGDNGRV 200 (376)
T ss_dssp EEEECSSCCCSCCEEE---TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TT--EEEECCTTTEE
T ss_pred EEEeCCCceEcCCEEE---CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CC--EEEEEcCCCEE
Confidence 7776443222222222 3578888899999999999999988877543321 12222 22 57778889999
Q ss_pred EEEEcCCCCcceEEecCCCCC---------eEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCe
Q 001366 939 YCYDLRNARAPWCVLAGHEKA---------VSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEK 1009 (1092)
Q Consensus 939 ~vwDlr~~~~~~~~l~~H~~~---------V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V 1009 (1092)
..+|..+++..+......... +.......++.++.++.++.|..+|..+ +..+..... ...
T Consensus 201 ~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~t--------G~~~w~~~~--~~~ 270 (376)
T 3q7m_A 201 SAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRS--------GQIMWKREL--GSV 270 (376)
T ss_dssp EEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTT--------CCEEEEECC--CCE
T ss_pred EEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCC--------CcEEeeccC--CCC
Confidence 999999887654432221100 1000011357788888899999999984 333443331 223
Q ss_pred EEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEE
Q 001366 1010 NFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVL 1089 (1092)
Q Consensus 1010 ~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW 1089 (1092)
..+. .++..|..++.++.|+.+|..+++.+...... . ...+.+... .+..|+.++.+|.|.+|
T Consensus 271 ~~~~--~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~-----~--------~~~~~~~~~--~~~~l~v~~~~g~l~~~ 333 (376)
T 3q7m_A 271 NDFI--VDGNRIYLVDQNDRVMALTIDGGVTLWTQSDL-----L--------HRLLTSPVL--YNGNLVVGDSEGYLHWI 333 (376)
T ss_dssp EEEE--EETTEEEEEETTCCEEEEETTTCCEEEEECTT-----T--------TSCCCCCEE--ETTEEEEECTTSEEEEE
T ss_pred CCce--EECCEEEEEcCCCeEEEEECCCCcEEEeeccc-----C--------CCcccCCEE--ECCEEEEEeCCCeEEEE
Confidence 3333 34668888888999999999999887765410 0 011111111 24567777788888887
Q ss_pred Ec
Q 001366 1090 QM 1091 (1092)
Q Consensus 1090 ~l 1091 (1092)
+.
T Consensus 334 d~ 335 (376)
T 3q7m_A 334 NV 335 (376)
T ss_dssp ET
T ss_pred EC
Confidence 63
No 480
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.74 E-value=1.4e-06 Score=108.38 Aligned_cols=261 Identities=11% Similarity=0.079 Sum_probs=162.3
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCCCCCccccccee-eecCCCCeEE-EEEecCCCCEEEEEEC------CCcEEEEECCCC
Q 001366 790 DEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAV-EMSNRSKLSC-VCWNNYIKNYLASADY------DGVVKLWDACTG 861 (1092)
Q Consensus 790 dg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~-~~~h~~~V~~-v~~sp~~~~~LaSgs~------DgtV~IWD~~tg 861 (1092)
++..+.+++.|+.|..+|..+... ....... .......+.+ .... +..++.++. +|.|+.||..+|
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~---~W~~~~~~~~~~~~~~~~~p~v~---~~~v~v~~~~~~~~~~g~v~a~D~~tG 200 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKE---VWHQNTFEGQKGSLTITGAPRVF---KGKVIIGNGGAEYGVRGYITAYDAETG 200 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCE---EEEEETTTTCCSSCBCCSCCEEE---TTEEEECCBCTTTCCBCEEEEEETTTC
T ss_pred ECCEEEEEcCCCEEEEEECCCCCE---EeeecCCcCcCcCcccccCcEEE---CCEEEEEecccccCCCCEEEEEECCCC
Confidence 356788888899999999865221 0000000 0000011111 1111 335555543 799999999999
Q ss_pred ceEEEeeccCcc--------------------------------EEEEEEecCCCCEEEEEeCCC---------------
Q 001366 862 QTVSHYIEHEKR--------------------------------AWSVDFSQVHPTKLASGSDDC--------------- 894 (1092)
Q Consensus 862 ~~i~~l~~h~~~--------------------------------V~sv~fsp~~~~~laSgs~Dg--------------- 894 (1092)
+.+..+...... ...+++.| +..+++.++.++
T Consensus 201 ~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd~ 279 (677)
T 1kb0_A 201 ERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGDN 279 (677)
T ss_dssp CEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCC
T ss_pred cEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC-CCCEEEEECCCCccccCCCCCccCCCC
Confidence 988877532211 12567888 667777777654
Q ss_pred ----cEEEEecCCCceeeeEecC----------CceEEEEEccCCC--eEEEEEECCCeEEEEEcCCCCcceEEecCCCC
Q 001366 895 ----SVKLWNINEKNSLATIKNI----------ANVCCVQFSAHSS--HLLAFGSADYRTYCYDLRNARAPWCVLAGHEK 958 (1092)
Q Consensus 895 ----~I~iWDl~~~~~l~~l~~~----------~~V~sl~fsp~~~--~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~ 958 (1092)
+|..+|..+|+.+..++.. .....+....+|. ..+++++.+|.++++|..+++.....-.....
T Consensus 280 ~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~ 359 (677)
T 1kb0_A 280 LYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVN 359 (677)
T ss_dssp TTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCS
T ss_pred eeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccC
Confidence 5999999999999887731 1233334444552 47889999999999999998754332211100
Q ss_pred ----------Ce------------------------EEEEEc-CCCEEEEEEC---------------------------
Q 001366 959 ----------AV------------------------SYVKFL-DSGTLVTAST--------------------------- 976 (1092)
Q Consensus 959 ----------~V------------------------~~v~fs-~~~~L~Sgs~--------------------------- 976 (1092)
++ ..++|+ ..+.+++...
T Consensus 360 ~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 439 (677)
T 1kb0_A 360 WASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTG 439 (677)
T ss_dssp SEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGT
T ss_pred cccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccc
Confidence 01 145666 3456665443
Q ss_pred ----------------CCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCc
Q 001366 977 ----------------DNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMP 1040 (1092)
Q Consensus 977 ----------------Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~ 1040 (1092)
.|.|..||+.+ ++.+..+. +..+++...++.++..++.|+.|+.+++||..+++.
T Consensus 440 ~~~g~~~~~~~~~~~~~g~l~A~D~~t--------G~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 440 WNTAKFFNAEPPKSKPFGRLLAWDPVA--------QKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp CCCCEEECSSCCCSCCEEEEEEEETTT--------TEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cccccccccccCCCCCccEEEEEeCCC--------CcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence 27799999883 44555554 233455566778888999999999999999999999
Q ss_pred eeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEE
Q 001366 1041 ITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVA 1079 (1092)
Q Consensus 1041 i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Las 1079 (1092)
+.++..+. .....-+.|..+|+.+++
T Consensus 511 lw~~~~~~-------------~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 511 LWEAPTGT-------------GVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp EEEEECSS-------------CCCSCCEEEEETTEEEEE
T ss_pred eeeeeCCC-------------CcccCCEEEEeCCEEEEE
Confidence 99887532 112233556778764443
No 481
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.74 E-value=9.5e-07 Score=109.85 Aligned_cols=224 Identities=11% Similarity=0.087 Sum_probs=150.2
Q ss_pred CCEEEEEECCCcEEEEECCCCceEEEeecc-C----ccEEEEEEecCCCCEEEEEeC------CCcEEEEecCCCceeee
Q 001366 841 KNYLASADYDGVVKLWDACTGQTVSHYIEH-E----KRAWSVDFSQVHPTKLASGSD------DCSVKLWNINEKNSLAT 909 (1092)
Q Consensus 841 ~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h-~----~~V~sv~fsp~~~~~laSgs~------Dg~I~iWDl~~~~~l~~ 909 (1092)
+..|+.++.|+.|..+|..+|+.+..+..+ . ..+.+.-... + ..++.++. ++.|..||..+|+.+..
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~-~-~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF-K-GKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE-T-TEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEE-C-CEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 467888899999999999999999888754 1 1221111111 3 34555543 79999999999999988
Q ss_pred EecCCc---------------------------------eEEEEEccCCCeEEEEEECCC-------------------e
Q 001366 910 IKNIAN---------------------------------VCCVQFSAHSSHLLAFGSADY-------------------R 937 (1092)
Q Consensus 910 l~~~~~---------------------------------V~sl~fsp~~~~~latgs~Dg-------------------~ 937 (1092)
+..... ...++++|++. ++++++.++ .
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~-~vy~~~~~~~~w~~~~~~~~~gd~~~~~s 284 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELN-TMYVGTGNGSPWSHKVRSPKGGDNLYLAS 284 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCC-EEEEECCCCccccCCCCCccCCCCeeeEE
Confidence 863211 13578888875 677676654 5
Q ss_pred EEEEEcCCCCcceEEecC-CC-------CCeEEEEEc-CC---CEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcC-
Q 001366 938 TYCYDLRNARAPWCVLAG-HE-------KAVSYVKFL-DS---GTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG- 1004 (1092)
Q Consensus 938 I~vwDlr~~~~~~~~l~~-H~-------~~V~~v~fs-~~---~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~- 1004 (1092)
|..+|..+++..+..-.. |. .....+... ++ ..++.++.+|.|.++|..+++. +..+.-
T Consensus 285 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~--------l~~~~~~ 356 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKF--------ISAKNFV 356 (677)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE--------EEEEESS
T ss_pred EEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCE--------ecccccc
Confidence 999999998865554332 31 112222222 45 5788999999999999986542 222210
Q ss_pred -----------------------------------CCCCeEEEEEecCCCEEEEEecC----------------------
Q 001366 1005 -----------------------------------HTNEKNFVGLSTADGYIACGSES---------------------- 1027 (1092)
Q Consensus 1005 -----------------------------------h~~~V~~v~~spdg~~lasgs~D---------------------- 1027 (1092)
..+ -..++++|+++++++.+.+
T Consensus 357 ~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~-w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~ 435 (677)
T 1kb0_A 357 PVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHN-WHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQ 435 (677)
T ss_dssp CCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSC-SSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTT
T ss_pred ccCcccccCCCCceeeccccCcCCCccEECcCcccccC-CCCceEcCCCCEEEEeChhcceeeecccccccccccccccc
Confidence 000 0257899998887765432
Q ss_pred ---------------------CcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeE
Q 001366 1028 ---------------------NEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCI 1086 (1092)
Q Consensus 1028 ---------------------g~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V 1086 (1092)
+.|..||..+++.+..++.+ ..+++..+..++.+++.++.||.|
T Consensus 436 ~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~---------------~~~~~g~~~~~g~~v~~g~~dg~l 500 (677)
T 1kb0_A 436 SGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV---------------SPWNGGTLTTAGNVVFQGTADGRL 500 (677)
T ss_dssp GGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES---------------SSCCCCEEEETTTEEEEECTTSEE
T ss_pred cccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC---------------CCCcCcceEeCCCEEEEECCCCcE
Confidence 67999999999888877642 123334456778889999999999
Q ss_pred EEEEc
Q 001366 1087 KVLQM 1091 (1092)
Q Consensus 1087 ~vW~l 1091 (1092)
++||+
T Consensus 501 ~a~D~ 505 (677)
T 1kb0_A 501 VAYHA 505 (677)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99985
No 482
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.73 E-value=8.1e-08 Score=109.10 Aligned_cols=231 Identities=9% Similarity=0.050 Sum_probs=147.1
Q ss_pred CCeEEEEEecCCCCEEEEEE--CCCcEEEEECCCCceEEEee-------ccCccEEEEEEecCCCCEEEEEeC-----CC
Q 001366 829 SKLSCVCWNNYIKNYLASAD--YDGVVKLWDACTGQTVSHYI-------EHEKRAWSVDFSQVHPTKLASGSD-----DC 894 (1092)
Q Consensus 829 ~~V~~v~~sp~~~~~LaSgs--~DgtV~IWD~~tg~~i~~l~-------~h~~~V~sv~fsp~~~~~laSgs~-----Dg 894 (1092)
.....|+++++ ++++++.. .++.++||.+.+++ +..+. .|-..+.+|++.+ ++.++++-.. ++
T Consensus 17 ~~p~~va~~~~-g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~-~g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPD-GRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDG-NGIVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTT-SCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECS-SSEEEEEECHHHHTSCC
T ss_pred CCcceEEECCC-CCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcC-CCcEEEEcCCCCcCCCC
Confidence 57889999997 78888864 23436667665554 33332 2446789999999 6766665433 57
Q ss_pred cEEEEecCCCceeeeEecC-------CceEEEEEccCCCeEEEEEE---CCCeEEEEEcCCCCcceEEecCCCCCeE-EE
Q 001366 895 SVKLWNINEKNSLATIKNI-------ANVCCVQFSAHSSHLLAFGS---ADYRTYCYDLRNARAPWCVLAGHEKAVS-YV 963 (1092)
Q Consensus 895 ~I~iWDl~~~~~l~~l~~~-------~~V~sl~fsp~~~~~latgs---~Dg~I~vwDlr~~~~~~~~l~~H~~~V~-~v 963 (1092)
.|.+||+.+++.+.++... ..+..++++|++..++++.. .++.|.+||+.+++ ....+.+|..... ..
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~-~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL-AARVLQGYPGIAPEDI 172 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC-EEEECTTCTTTSCCSC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC-EEEEecCCCccccccc
Confidence 8999999999877776532 34689999987655666666 68899999998765 3455555432111 02
Q ss_pred EEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCC-cEEEEeCCC--CC
Q 001366 964 KFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESN-EVYAYHRSL--PM 1039 (1092)
Q Consensus 964 ~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg-~I~Iwd~~~--~~ 1039 (1092)
.+. ++..+.+.+.+++++.|.. .++.++|+|+|++|+.+..++ .|+.++... ..
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~----------------------~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~ 230 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHL----------------------GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNL 230 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCC----------------------CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCT
T ss_pred ceeECCEEEEeccCCCceeceec----------------------ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCC
Confidence 222 4445666677777665531 356799999999887777655 555554210 00
Q ss_pred ceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1040 PITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1040 ~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.+..... .......++......++++++|.++++...++.|.+|+.
T Consensus 231 ~~~~~~~------~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 231 QLTDAEL------GSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp TCCHHHH------HTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred CCChhhh------hcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 0000000 000000112234667999999999999989999999984
No 483
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.71 E-value=1.4e-05 Score=86.91 Aligned_cols=257 Identities=7% Similarity=-0.024 Sum_probs=153.8
Q ss_pred CEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeeccC
Q 001366 792 DHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHE 871 (1092)
Q Consensus 792 ~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~ 871 (1092)
.+|+.+.. +.|+.++++......... .+.. ......+.+++|+++.+.++++...++.|..+|...+.....+...-
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~-~~~~-~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 78 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEA-KAFL-HIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL 78 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGC-EEEE-EEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccc-eeee-cCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC
Confidence 34555443 478888876522111100 0111 11124568999998745566666667899999987665443333323
Q ss_pred ccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecC-CceEEEEEccCCCeEEEEEEC--CCeEEEEEcCCCCc
Q 001366 872 KRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNI-ANVCCVQFSAHSSHLLAFGSA--DYRTYCYDLRNARA 948 (1092)
Q Consensus 872 ~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~-~~V~sl~fsp~~~~~latgs~--Dg~I~vwDlr~~~~ 948 (1092)
.....+++.+..+.++++-...+.|.++|+........+... .....++++|++..++++... .+.|..+++.....
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~ 158 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR 158 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc
Confidence 467899999844556666667789999998744322222222 467899999976555555543 47899998864322
Q ss_pred ceEEecCCCCCeEEEEEcC-CCEEE-EEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEec
Q 001366 949 PWCVLAGHEKAVSYVKFLD-SGTLV-TASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSE 1026 (1092)
Q Consensus 949 ~~~~l~~H~~~V~~v~fs~-~~~L~-Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~ 1026 (1092)
.......-.....+++++ ++.|+ +-...+.|.++|... ......+.+ ......++.. .+.++++...
T Consensus 159 -~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g--------~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~ 227 (267)
T 1npe_A 159 -RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ--------PGRRKVLEG-LQYPFAVTSY-GKNLYYTDWK 227 (267)
T ss_dssp -EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE--------EEEEEEEEC-CCSEEEEEEE-TTEEEEEETT
T ss_pred -EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC--------CceEEEecC-CCCceEEEEe-CCEEEEEECC
Confidence 112222334678899984 56665 444568899999872 111122222 2233556554 3334444446
Q ss_pred CCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCC
Q 001366 1027 SNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSD 1075 (1092)
Q Consensus 1027 Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~ 1075 (1092)
++.|.+++..+++.+..+..+. ......|++.|+++
T Consensus 228 ~~~v~~~d~~~g~~~~~i~~g~-------------~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 228 TNSVIAMDLAISKEMDTFHPHK-------------QTRLYGITIALSQC 263 (267)
T ss_dssp TTEEEEEETTTTEEEEEECCSS-------------CCCCCCEEEECSCC
T ss_pred CCeEEEEeCCCCCceEEEcccc-------------ccccceeeecCccC
Confidence 7899999998888877765321 11356788888876
No 484
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.70 E-value=1.8e-06 Score=107.58 Aligned_cols=259 Identities=14% Similarity=0.095 Sum_probs=157.6
Q ss_pred CCEEEEEeCCCcEEEEEcCCCCCCCccccccee-eecCCCCeEE-EEEecCCCCEEEEEE------CCCcEEEEECCCCc
Q 001366 791 EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAV-EMSNRSKLSC-VCWNNYIKNYLASAD------YDGVVKLWDACTGQ 862 (1092)
Q Consensus 791 g~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~-~~~h~~~V~~-v~~sp~~~~~LaSgs------~DgtV~IWD~~tg~ 862 (1092)
+..+++++.|+.|..+|..+... ....... .......+.+ .... +..++.++ .+|.|+.||..+|+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~---~W~~~~~~~~~~~~~~~~sP~v~---~g~v~vg~~~~~~~~~g~v~a~D~~tG~ 194 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQR---AWSVDTRADHKRSYTITGAPRVV---NGKVVIGNGGAEFGVRGYVTAYDAETGK 194 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCE---EEEEECCSCTTSCCBCCSCCEEE---TTEEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred CCEEEEEccCCEEEEEECCCCCE---eeeecCcCCCCCCccccCCcEEE---CCEEEEEeCCCccCCCCEEEEEECCCCc
Confidence 56788888899999999865221 0000000 0000001110 0111 23444443 37899999999999
Q ss_pred eEEEeeccC------------------------------ccE-EEEEEecCCCCEEEEEeCCCc----------------
Q 001366 863 TVSHYIEHE------------------------------KRA-WSVDFSQVHPTKLASGSDDCS---------------- 895 (1092)
Q Consensus 863 ~i~~l~~h~------------------------------~~V-~sv~fsp~~~~~laSgs~Dg~---------------- 895 (1092)
.+..+.... ..+ ..+++.| +..+++.++.++.
T Consensus 195 ~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y 273 (689)
T 1yiq_A 195 EAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLF 273 (689)
T ss_dssp EEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTT
T ss_pred EEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCcee
Confidence 887765210 011 2577888 6678888887764
Q ss_pred ---EEEEecCCCceeeeEecC----------CceEEEEEccCCC--eEEEEEECCCeEEEEEcCCCCcceEEecCCCCC-
Q 001366 896 ---VKLWNINEKNSLATIKNI----------ANVCCVQFSAHSS--HLLAFGSADYRTYCYDLRNARAPWCVLAGHEKA- 959 (1092)
Q Consensus 896 ---I~iWDl~~~~~l~~l~~~----------~~V~sl~fsp~~~--~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~- 959 (1092)
|..||..+|+.+..++.. ..+.......+|. ..++.++.+|.++++|.++++.....-..+...
T Consensus 274 ~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~ 353 (689)
T 1yiq_A 274 LSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWT 353 (689)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE
T ss_pred eeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccc
Confidence 999999999999888731 1122222222442 368889999999999999987532211111000
Q ss_pred -------------------------------------eEEEEEc-CCCEEEEEEC-------------------------
Q 001366 960 -------------------------------------VSYVKFL-DSGTLVTAST------------------------- 976 (1092)
Q Consensus 960 -------------------------------------V~~v~fs-~~~~L~Sgs~------------------------- 976 (1092)
-..++|+ ..+.+++.+.
T Consensus 354 ~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g 433 (689)
T 1yiq_A 354 KGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLG 433 (689)
T ss_dssp EEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCS
T ss_pred cccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccC
Confidence 0124565 3445554422
Q ss_pred --------------------CCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCC
Q 001366 977 --------------------DNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRS 1036 (1092)
Q Consensus 977 --------------------Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~ 1036 (1092)
+|.|..||+. +++.+..+..+. +.+...++..+.+++.|+.|+.|+.||..
T Consensus 434 ~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~--------tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~ 504 (689)
T 1yiq_A 434 LRTGMMPEGAEGLLEMAKSWSGKLIAWDPV--------KQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAAD 504 (689)
T ss_dssp SEECCCCSSHHHHHHHHTTCEEEEEEEETT--------TTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred ccccccCcccccCCCCCCCcceeEEEEECC--------CCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECC
Confidence 3779999988 445555555443 33444677788899999999999999999
Q ss_pred CCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEE
Q 001366 1037 LPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVV 1078 (1092)
Q Consensus 1037 ~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~La 1078 (1092)
+++.+..++.+. .....-+.|..+|+..+
T Consensus 505 tG~~lw~~~~~~-------------~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 505 TGEKLWEQPAAS-------------GVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp TCCEEEEEECSS-------------CCCSCCEEEEETTEEEE
T ss_pred CCccceeeeCCC-------------CcccCceEEEECCEEEE
Confidence 999999887431 11223366677876443
No 485
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.70 E-value=6.8e-09 Score=119.53 Aligned_cols=186 Identities=12% Similarity=0.030 Sum_probs=109.6
Q ss_pred CCEEEEEECCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEecC--CceE-
Q 001366 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKNI--ANVC- 917 (1092)
Q Consensus 841 ~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~--~~V~- 917 (1092)
+..+++++.||.|+.||..+|+.+..+.. ..+.+..+.. ++.++++++.|+.|..||..+++.+..+... ..+.
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 67899999999999999999999988876 4555555555 5667888889999999999999887766532 1111
Q ss_pred EEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCCCeEEEEEc-CCCEEEEEECCCeEEEEEcCCCCCCCCCCC
Q 001366 918 CVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFL-DSGTLVTASTDNKLKLWDLKRTSHTGPSTN 996 (1092)
Q Consensus 918 sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs-~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~ 996 (1092)
+..+. .+ ..+++|+.|+.|+.||..+++..+ .+..+.. +.++ .++.+++++.|+.|..||.++++
T Consensus 86 sp~~~-~~-~~v~~g~~dg~v~a~D~~tG~~~w-~~~~~~~----~~~~p~~~~v~~~~~dg~v~a~d~~tG~------- 151 (369)
T 2hz6_A 86 SPCRS-SD-GILYMGKKQDIWYVIDLLTGEKQQ-TLSSAFA----DSLSPSTSLLYLGRTEYTITMYDTKTRE------- 151 (369)
T ss_dssp CSCC-------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSS-------
T ss_pred CceEe-cC-CEEEEEeCCCEEEEEECCCCcEEE-EecCCCc----ccccccCCEEEEEecCCEEEEEECCCCC-------
Confidence 01111 23 267788899999999999887643 3333321 2223 56788899999999999998543
Q ss_pred ceeEEEcCCCCCeEEEEEecCC---CEEEEEecCCcEEEEeCCCCCceeeeec
Q 001366 997 ACSLTFSGHTNEKNFVGLSTAD---GYIACGSESNEVYAYHRSLPMPITSYKF 1046 (1092)
Q Consensus 997 ~~~~~l~~h~~~V~~v~~spdg---~~lasgs~Dg~I~Iwd~~~~~~i~~~~~ 1046 (1092)
.+..+..+. .....++.+. ..+++++.|+.|+.||..+++.+....+
T Consensus 152 -~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 201 (369)
T 2hz6_A 152 -LRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY 201 (369)
T ss_dssp -CCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC
T ss_pred -EEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC
Confidence 222222110 1112233322 5677788999999999999998887664
No 486
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.64 E-value=3.3e-06 Score=105.16 Aligned_cols=233 Identities=13% Similarity=0.142 Sum_probs=146.9
Q ss_pred CCEEEEEECCCcEEEEECCCCceEEEeecc--CccEEEEEEec--CCCCEEEEEe------CCCcEEEEecCCCceeeeE
Q 001366 841 KNYLASADYDGVVKLWDACTGQTVSHYIEH--EKRAWSVDFSQ--VHPTKLASGS------DDCSVKLWNINEKNSLATI 910 (1092)
Q Consensus 841 ~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h--~~~V~sv~fsp--~~~~~laSgs------~Dg~I~iWDl~~~~~l~~l 910 (1092)
+..|+.++.|+.|..||..+|+.+..+... ......+..+| .++ .++.++ .++.|..||..+|+.+..+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 457888999999999999999988877642 11111111111 033 444443 3789999999999998887
Q ss_pred ecC----C----------------------------ceEEEEEccCCCeEEEEEECCCe-------------------EE
Q 001366 911 KNI----A----------------------------NVCCVQFSAHSSHLLAFGSADYR-------------------TY 939 (1092)
Q Consensus 911 ~~~----~----------------------------~V~sl~fsp~~~~~latgs~Dg~-------------------I~ 939 (1092)
... . ....++++|++. ++++++.++. |.
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~ 278 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELN-LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIV 278 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHHTTCSCCTTTTEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 621 0 012578888775 7788877764 99
Q ss_pred EEEcCCCCcceEEecC-CC-------CCeEEEEEc-CCC---EEEEEECCCeEEEEEcCCCCCCCCC-------------
Q 001366 940 CYDLRNARAPWCVLAG-HE-------KAVSYVKFL-DSG---TLVTASTDNKLKLWDLKRTSHTGPS------------- 994 (1092)
Q Consensus 940 vwDlr~~~~~~~~l~~-H~-------~~V~~v~fs-~~~---~L~Sgs~Dg~I~vWDl~~~~~~~~~------------- 994 (1092)
.+|..+++..+..... |. ..+...... ++. .++.++.+|.+.++|..+++.....
T Consensus 279 AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~ 358 (689)
T 1yiq_A 279 AVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDM 358 (689)
T ss_dssp EEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEET
T ss_pred EEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCc
Confidence 9999999876544332 32 112222221 343 6888999999999999865431000
Q ss_pred -CCcee---------------EEEc---CCCCCeEEEEEecCCCEEEEEec-----------------------------
Q 001366 995 -TNACS---------------LTFS---GHTNEKNFVGLSTADGYIACGSE----------------------------- 1026 (1092)
Q Consensus 995 -~~~~~---------------~~l~---~h~~~V~~v~~spdg~~lasgs~----------------------------- 1026 (1092)
....+ ..+. +.. .-..++++|+.+++++.+.
T Consensus 359 ~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~-~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 437 (689)
T 1yiq_A 359 KTGRPILDEENAAYWKNGKRNLVTPAFWGAH-DWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTG 437 (689)
T ss_dssp TTTEEEECHHHHCTTTSSSCEEESSCTTCSS-CSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEEC
T ss_pred cCCCcccchhhccccCCCCeeEeCCCccccc-CCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccc
Confidence 00000 0000 000 1123788998887776533
Q ss_pred ----------------CCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1027 ----------------SNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1027 ----------------Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
+|.|+.||..+++.+..++.+. .+..-.+...+.+|+.|+.||.|++||
T Consensus 438 ~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~---------------~~~~g~~~tagglvf~gt~dg~l~a~D 502 (689)
T 1yiq_A 438 MMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT---------------IFNGGTLSTAGNLVFEGSADGRVIAYA 502 (689)
T ss_dssp CCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS---------------SCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred ccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC---------------CccCccceECCCEEEEECCCCcEEEEE
Confidence 3678889988888887776421 122234556788999999999999998
Q ss_pred c
Q 001366 1091 M 1091 (1092)
Q Consensus 1091 l 1091 (1092)
.
T Consensus 503 ~ 503 (689)
T 1yiq_A 503 A 503 (689)
T ss_dssp T
T ss_pred C
Confidence 5
No 487
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.64 E-value=4.2e-09 Score=121.34 Aligned_cols=149 Identities=15% Similarity=0.022 Sum_probs=86.2
Q ss_pred CCCEEEEEeCCCcEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecCCCC-CeE
Q 001366 883 HPTKLASGSDDCSVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEK-AVS 961 (1092)
Q Consensus 883 ~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~H~~-~V~ 961 (1092)
++..+++++.|+.|..||..+|+.++++.. ..+.+..+..++. ++++++.|+.|+.||..+++..+ ....+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~~w-~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEGLT-KLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----C-CEEECTTTCCEEEC-----CCSE-ECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCC-EEEEeCCCCEEEEEECCCCceee-eeeccCccccc
Confidence 467899999999999999999999998887 5565555666663 67777899999999998876533 2222210 010
Q ss_pred -EEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCc
Q 001366 962 -YVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMP 1040 (1092)
Q Consensus 962 -~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~ 1040 (1092)
+..+..++.+++++.|+.|..||..++ +.+..+..+. .+.++|+++.|++++.|+.|+.||..+++.
T Consensus 85 ~sp~~~~~~~v~~g~~dg~v~a~D~~tG--------~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 85 ASPCRSSDGILYMGKKQDIWYVIDLLTG--------EKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTREL 152 (369)
T ss_dssp TCSCC-----CCCCEEEEEEEEECCC----------------------------------EEEEEEEEEEECCCSSSSSC
T ss_pred cCceEecCCEEEEEeCCCEEEEEECCCC--------cEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCE
Confidence 111113567888889999999999854 3344444332 235567888999999999999999999988
Q ss_pred eeeeec
Q 001366 1041 ITSYKF 1046 (1092)
Q Consensus 1041 i~~~~~ 1046 (1092)
+..+.+
T Consensus 153 ~W~~~~ 158 (369)
T 2hz6_A 153 RWNATY 158 (369)
T ss_dssp CCEEEE
T ss_pred EEeEec
Confidence 877653
No 488
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.59 E-value=6.5e-07 Score=102.66 Aligned_cols=257 Identities=11% Similarity=-0.021 Sum_probs=158.8
Q ss_pred eEEEEEcccceEEeeEEeeeecCCCCCEEEEEEcCCCCEEEEEe----------CCCcEEEEEcCCCCCCCcccccceee
Q 001366 755 LCKYARYSKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAG----------VSKKIKIFEFNALFNDSVDVYYPAVE 824 (1092)
Q Consensus 755 ~~k~w~~~~~~~~~~l~~~~l~~h~~~V~sl~fspdg~~latgg----------~D~~I~Iwd~~~~~~~~~~~~~~~~~ 824 (1092)
.+.+.+...+++.+.+..+ . .+ .+.|+||++++.++. .+++|.+||..+... ... +.
T Consensus 47 ~vsvID~~t~~v~~~i~vG----~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v---v~~---I~ 113 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGA----F-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP---IAD---IE 113 (368)
T ss_dssp EEEEEETTTTEEEEEEEEC----T-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE---EEE---EE
T ss_pred eEEEEECCCCeEEEEEeCC----C-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE---EEE---EE
Confidence 6678888888888887753 2 24 599999999888776 368899999876221 111 11
Q ss_pred ec--C----CCCeEEEEEecCCCCEEEEEEC--CCcEEE--EECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCC
Q 001366 825 MS--N----RSKLSCVCWNNYIKNYLASADY--DGVVKL--WDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDC 894 (1092)
Q Consensus 825 ~~--h----~~~V~~v~~sp~~~~~LaSgs~--DgtV~I--WD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg 894 (1092)
.+ . ...-..+.++|+ +++++++.. +..|.+ +|..+ +..+.. ... +.+.|.....+++.+.|+
T Consensus 114 v~~~~~~~~g~~P~~ia~SpD-Gk~lyVan~~~~~~v~V~~iD~~t---v~~i~v-~~~---~~~~p~g~~~~~~~~~dg 185 (368)
T 1mda_H 114 LPDAPRFSVGPRVHIIGNCAS-SACLLFFLFGSSAAAGLSVPGASD---DQLTKS-ASC---FHIHPGAAATHYLGSCPA 185 (368)
T ss_dssp ETTSCSCCBSCCTTSEEECTT-SSCEEEEECSSSCEEEEEETTTEE---EEEEEC-SSC---CCCEEEETTEEECCCCTT
T ss_pred CCCccccccCCCcceEEEcCC-CCEEEEEccCCCCeEEEEEEchhh---ceEEEC-CCc---eEEccCCCeEEEEEcCCC
Confidence 11 0 123457899998 777777764 467888 99877 444431 111 123343445677778899
Q ss_pred cEEEEecCC-----Cceee----eEec-CCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCc-ceEEecC-------C
Q 001366 895 SVKLWNINE-----KNSLA----TIKN-IANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA-PWCVLAG-------H 956 (1092)
Q Consensus 895 ~I~iWDl~~-----~~~l~----~l~~-~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~-~~~~l~~-------H 956 (1092)
.+.+.|+.+ ++.+. .+.. ..+. . .+++..+++ .+. +.|.+.|+..... .+..+.- +
T Consensus 186 ~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~-vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~ 259 (368)
T 1mda_H 186 SLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVW-AVA-SSILQGDIPAAGATMKAAIDGNESGRKAD 259 (368)
T ss_dssp SCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEE-CBS-SCCEEEECCSSCCEEECCCCSSCTHHHHT
T ss_pred CEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEE-EcC-CEEEEEECCCCcceEEEEEEecccccccc
Confidence 999999986 44331 1211 2222 3 555554444 444 8999999865321 1111100 0
Q ss_pred ---CCCeEEEEEc-CCCEEEEEEC---------CCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCC-EEE
Q 001366 957 ---EKAVSYVKFL-DSGTLVTAST---------DNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADG-YIA 1022 (1092)
Q Consensus 957 ---~~~V~~v~fs-~~~~L~Sgs~---------Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~-~la 1022 (1092)
......+.|+ +++.++.+.. ++.+.+||+.+ .+.+.++.... ....++|+|||+ .++
T Consensus 260 ~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t--------~~vv~~i~vg~-~p~gi~~s~Dg~~l~v 330 (368)
T 1mda_H 260 NFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV--------GQTSGPISNGH-DSDAIIAAQDGASDNY 330 (368)
T ss_dssp TEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS--------CCEEECCEEEE-EECEEEECCSSSCEEE
T ss_pred ccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCC--------CeEEEEEECCC-CcceEEECCCCCEEEE
Confidence 0111125677 5666665432 23566999984 34444443222 477899999997 556
Q ss_pred EEe-cCCcEEEEeCCCCCceeeeecc
Q 001366 1023 CGS-ESNEVYAYHRSLPMPITSYKFG 1047 (1092)
Q Consensus 1023 sgs-~Dg~I~Iwd~~~~~~i~~~~~~ 1047 (1092)
+.. .++.|.|+|..+.+.+.++..|
T Consensus 331 a~~~~~~~VsVID~~t~kvv~~I~vg 356 (368)
T 1mda_H 331 ANSAGTEVLDIYDAASDQDQSSVELD 356 (368)
T ss_dssp EEETTTTEEEEEESSSCEEEEECCCC
T ss_pred EccCCCCeEEEEECCCCcEEEEEECC
Confidence 666 5999999999999999888753
No 489
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.58 E-value=2e-06 Score=95.85 Aligned_cols=262 Identities=13% Similarity=0.115 Sum_probs=165.8
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEEC
Q 001366 779 ANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDA 858 (1092)
Q Consensus 779 ~~~V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~ 858 (1092)
...+.++...++|.+++ ++.+ |..||.... ....... ........... +..|..++.++.|..+|.
T Consensus 59 ~~~~~~~~~~~~g~l~v-~t~~--l~~~d~~g~----~~~~~~~----~~~~~~~~~~~---~~~l~v~t~~~~l~~~d~ 124 (330)
T 3hxj_A 59 EIIECRPSIGKDGTIYF-GSDK--VYAINPDGT----EKWRFDT----KKAIVSDFTIF---EDILYVTSMDGHLYAINT 124 (330)
T ss_dssp GEEEECCEETTTTEECC-SSCE--EEEECCCGG----GGGGSCC---------CCEEEE---TTEEEEECTTSEEEEECT
T ss_pred CCcccceEEecCCcEEE-ecCc--EEEECCCCc----EEEEEEC----CCCcccCceEE---CCEEEEEecCCEEEEEcC
Confidence 34567777877776554 3333 777774321 1111110 11112222233 346777888999999998
Q ss_pred CCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEec-CCceEEEEEccCCCeEEEEEECCCe
Q 001366 859 CTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKN-IANVCCVQFSAHSSHLLAFGSADYR 937 (1092)
Q Consensus 859 ~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~-~~~V~sl~fsp~~~~~latgs~Dg~ 937 (1092)
. ++....+..+...+.++...+ ++. +..++.++.|..||.. ++.+..+.. ...+.++.+.+++. +.+++ +.
T Consensus 125 ~-g~~~~~~~~~~~~~~~~~~~~-~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~--l~v~t--~~ 196 (330)
T 3hxj_A 125 D-GTEKWRFKTKKAIYATPIVSE-DGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT--IYFGS--DK 196 (330)
T ss_dssp T-SCEEEEEECSSCCCSCCEECT-TSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC--EEEES--SS
T ss_pred C-CCEEEEEcCCCceeeeeEEcC-CCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE--EEEEe--CE
Confidence 8 877777665555566666665 444 6667888999999999 887777664 34566777777774 44454 88
Q ss_pred EEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecC
Q 001366 938 TYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTA 1017 (1092)
Q Consensus 938 I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spd 1017 (1092)
|..|| .+++. ..........+.++...+++.|..++.++.|..+|.. +.....+......+..+.+.++
T Consensus 197 l~~~d-~~g~~-~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~ 265 (330)
T 3hxj_A 197 VYAIN-PDGTE-KWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPD---------GTEKWRFKTGKRIESSPVIGNT 265 (330)
T ss_dssp EEEEC-TTSCE-EEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECTT---------SCEEEEEECSSCCCSCCEECTT
T ss_pred EEEEC-CCCcE-EEEEccCCcceeceEECCCCeEEEEcCCCeEEEECCC---------CCEeEEeeCCCCccccceEcCC
Confidence 99999 55543 3344444456777777766678888888899988743 2334444443333444555555
Q ss_pred CCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEE
Q 001366 1018 DGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1018 g~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~ 1090 (1092)
+ .|..++.++.|+.+|. .++.+..+.. ....+.++...+++.+ ..++.+|.+++..
T Consensus 266 g-~l~v~t~~ggl~~~d~-~g~~~~~~~~--------------~~~~~~~~~~d~~g~l-~~gt~~G~~~~~~ 321 (330)
T 3hxj_A 266 D-TIYFGSYDGHLYAINP-DGTEKWNFET--------------GSWIIATPVIDENGTI-YFGTRNGKFYALF 321 (330)
T ss_dssp S-CEEEECTTCEEEEECT-TSCEEEEEEC--------------SSCCCSCCEECTTCCE-EEECTTSCEEEEE
T ss_pred C-eEEEecCCCCEEEECC-CCcEEEEEEc--------------CCccccceEEcCCCEE-EEEcCCCeEEEEe
Confidence 5 5667778888999985 5666655442 1234566777777774 4588899998865
No 490
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.56 E-value=1.9e-05 Score=91.50 Aligned_cols=233 Identities=11% Similarity=0.029 Sum_probs=146.3
Q ss_pred cCCCCEEEEEECCCcEEEEECCCC----ceEEEee------c-cCccEEEEEEecCCCCEEEEEeCC------CcEEEEe
Q 001366 838 NYIKNYLASADYDGVVKLWDACTG----QTVSHYI------E-HEKRAWSVDFSQVHPTKLASGSDD------CSVKLWN 900 (1092)
Q Consensus 838 p~~~~~LaSgs~DgtV~IWD~~tg----~~i~~l~------~-h~~~V~sv~fsp~~~~~laSgs~D------g~I~iWD 900 (1092)
.+...+++++-.++.|.++|+.+. +..+++. . .......+.+.| ++ +++++..+ +.|.++|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEE
Confidence 553456667778899999999765 5666663 1 112455677888 77 77777666 7899999
Q ss_pred cCCCceeeeEecC-C---ceEEEEEccCCCeEEEEEE-------------------CCCeEEEEEcCCCCcceEEecC--
Q 001366 901 INEKNSLATIKNI-A---NVCCVQFSAHSSHLLAFGS-------------------ADYRTYCYDLRNARAPWCVLAG-- 955 (1092)
Q Consensus 901 l~~~~~l~~l~~~-~---~V~sl~fsp~~~~~latgs-------------------~Dg~I~vwDlr~~~~~~~~l~~-- 955 (1092)
..+.+.+.++... . --..+.|+|+++ .+++.. .+.+|.+||+.+.+ .+.++..
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k-~~~tI~vg~ 248 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK-RIHSLTLGE 248 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE-EEEEEESCT
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc-EeeEEecCC
Confidence 9999999988732 1 234588899996 666663 37899999999754 3444432
Q ss_pred CCCCeEEEEE--c-CCCEEEEEE------CCCeEEEEEcCCCCCCCCCCCceeEEE--cC----------------CCCC
Q 001366 956 HEKAVSYVKF--L-DSGTLVTAS------TDNKLKLWDLKRTSHTGPSTNACSLTF--SG----------------HTNE 1008 (1092)
Q Consensus 956 H~~~V~~v~f--s-~~~~L~Sgs------~Dg~I~vWDl~~~~~~~~~~~~~~~~l--~~----------------h~~~ 1008 (1092)
.......|.| + ++.+++.++ .+++|.+|....+. ......+ .. -.+.
T Consensus 249 ~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~------~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~ 322 (462)
T 2ece_A 249 ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK------WNAEKVIEIPAEPLEGNLPEILKPFKAVPPL 322 (462)
T ss_dssp TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE------EEEEEEEEECCEECCSSCCGGGGGGTEECCC
T ss_pred CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc------eeEEEEEeCCCccccccccccccccccCCCc
Confidence 1234556666 5 455655544 56788877664211 0111111 10 0234
Q ss_pred eEEEEEecCCCEEEEEe-cCCcEEEEeCCCC---Cceeeeecccc-CCCCCccccCCCCCCEEEEEEeCCCCEEEEEe
Q 001366 1009 KNFVGLSTADGYIACGS-ESNEVYAYHRSLP---MPITSYKFGSI-DPISGKETDDDNGLFVSSVCWRRRSDMVVAAN 1081 (1092)
Q Consensus 1009 V~~v~~spdg~~lasgs-~Dg~I~Iwd~~~~---~~i~~~~~~~~-~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs 1081 (1092)
...|.+|+||++|.++. ..+.|.+|++... +.+..+..|.. .... +.....-......++++|||++|++++
T Consensus 323 pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~-~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 323 VTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRAD-HPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBC-CTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred eeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecccc-ccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 67799999999887665 4789999998633 45555554311 0000 000000012357789999999999998
No 491
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.47 E-value=2.9e-05 Score=84.48 Aligned_cols=214 Identities=9% Similarity=-0.018 Sum_probs=138.5
Q ss_pred ceEEEeeccCcc--EEEEEEecCCCCEEEEEeC--CCcEEEEecCCCceeeeEecCCc--eEEEEEccCCCeEEEEEECC
Q 001366 862 QTVSHYIEHEKR--AWSVDFSQVHPTKLASGSD--DCSVKLWNINEKNSLATIKNIAN--VCCVQFSAHSSHLLAFGSAD 935 (1092)
Q Consensus 862 ~~i~~l~~h~~~--V~sv~fsp~~~~~laSgs~--Dg~I~iWDl~~~~~l~~l~~~~~--V~sl~fsp~~~~~latgs~D 935 (1092)
+.+.++. |... ...+.|++ ++.++++.+. ++.|.++|+.+++.+.++..... ...+++. +..+.++.-.+
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~ 85 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTC
T ss_pred eEEEEEE-CCCCCCcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecC
Confidence 3455553 5533 57999998 5655555553 68999999999999998875443 2344544 55566666678
Q ss_pred CeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcC--C---CCCeE
Q 001366 936 YRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG--H---TNEKN 1010 (1092)
Q Consensus 936 g~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~--h---~~~V~ 1010 (1092)
+.+.++|..+.+. +..+..-...-..+++ +++.++.+..+++|.++|..+ ......+.- + -...+
T Consensus 86 ~~v~viD~~t~~v-~~~i~~g~~~g~glt~-Dg~~l~vs~gs~~l~viD~~t--------~~v~~~I~Vg~~~~p~~~~n 155 (266)
T 2iwa_A 86 NIGFIYDRRTLSN-IKNFTHQMKDGWGLAT-DGKILYGSDGTSILYEIDPHT--------FKLIKKHNVKYNGHRVIRLN 155 (266)
T ss_dssp SEEEEEETTTTEE-EEEEECCSSSCCEEEE-CSSSEEEECSSSEEEEECTTT--------CCEEEEEECEETTEECCCEE
T ss_pred CEEEEEECCCCcE-EEEEECCCCCeEEEEE-CCCEEEEECCCCeEEEEECCC--------CcEEEEEEECCCCcccccce
Confidence 9999999987754 3444311122234554 566666666789999999884 333444432 1 12367
Q ss_pred EEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEE-EEEecCCeEEEE
Q 001366 1011 FVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMV-VAANSSGCIKVL 1089 (1092)
Q Consensus 1011 ~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~L-asgs~DG~V~vW 1089 (1092)
.+.|. +|..++....++.|.+-|..+++.+..+.++...+-. ...........+.|+|+|+++.| +|+...+.|.+.
T Consensus 156 ele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~-~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i 233 (266)
T 2iwa_A 156 ELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKL-IDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEI 233 (266)
T ss_dssp EEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHH-HHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred eEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCccccc-ccccccccCceEEEEEcCCCCEEEEECCCCCeEEEE
Confidence 78888 6755555556889999999999999988763110000 00001112467999999998655 555567888877
Q ss_pred Ec
Q 001366 1090 QM 1091 (1092)
Q Consensus 1090 ~l 1091 (1092)
++
T Consensus 234 ~l 235 (266)
T 2iwa_A 234 KL 235 (266)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 492
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.46 E-value=3.5e-05 Score=89.25 Aligned_cols=227 Identities=9% Similarity=0.054 Sum_probs=143.8
Q ss_pred CCCCEEE-EEeCCCcEEEEEcCCCCCCCccccccee----e--ecCCCCeEEEEEecCCCCEEEEEECC------CcEEE
Q 001366 789 RDEDHFA-AAGVSKKIKIFEFNALFNDSVDVYYPAV----E--MSNRSKLSCVCWNNYIKNYLASADYD------GVVKL 855 (1092)
Q Consensus 789 pdg~~la-tgg~D~~I~Iwd~~~~~~~~~~~~~~~~----~--~~h~~~V~~v~~sp~~~~~LaSgs~D------gtV~I 855 (1092)
++.++|. +|..+++|.|+|+.+.... ..... .+ . ......-..+...|+ + +++++..+ |.|.+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~-p~~~k-~ie~~~~~~~~g~s~Ph~~~~~pd-G-i~Vs~~g~~~g~~~g~v~v 168 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPRE-PKIIK-VIEPEEVKKVSGYSRLHTVHCGPD-A-IYISALGNEEGEGPGGILM 168 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTS-CEEEE-EECHHHHHHHHCEEEEEEEEECSS-C-EEEEEEEETTSCSCCEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCC-ceeee-eechhhcccccCCCcccceeECCC-e-EEEEcCCCcCCCCCCeEEE
Confidence 7777665 4557789999998642111 00100 00 0 001113345667787 5 77777666 78999
Q ss_pred EECCCCceEEEeeccCc---cEEEEEEecCCCCEEEEEe-------------------CCCcEEEEecCCCceeeeEecC
Q 001366 856 WDACTGQTVSHYIEHEK---RAWSVDFSQVHPTKLASGS-------------------DDCSVKLWNINEKNSLATIKNI 913 (1092)
Q Consensus 856 WD~~tg~~i~~l~~h~~---~V~sv~fsp~~~~~laSgs-------------------~Dg~I~iWDl~~~~~l~~l~~~ 913 (1092)
.|..+++.+.++..-.. -...+-|+| +.+.+++.. .+.+|.+||+.+++.+.++...
T Consensus 169 lD~~T~~v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 169 LDHYSFEPLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp ECTTTCCEEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred EECCCCeEEEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 99999999998863222 235688899 778888875 3789999999999888888864
Q ss_pred ---CceEEEEE--ccCCCeEEEEEE-----CCCeEEEEEcCCCCcc-eEE--ecC----------------CCCCeEEEE
Q 001366 914 ---ANVCCVQF--SAHSSHLLAFGS-----ADYRTYCYDLRNARAP-WCV--LAG----------------HEKAVSYVK 964 (1092)
Q Consensus 914 ---~~V~sl~f--sp~~~~~latgs-----~Dg~I~vwDlr~~~~~-~~~--l~~----------------H~~~V~~v~ 964 (1092)
....-+.| +|++...++++- .++.|.+|....+.-. ..+ +.. -......|.
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 23455655 999975555555 7788877665432110 000 010 024567888
Q ss_pred Ec-CCCEEEEEE-CCCeEEEEEcCCCCCCCCCCCceeEEEcCC-----------C---CCeEEEEEecCCCEEEEEe
Q 001366 965 FL-DSGTLVTAS-TDNKLKLWDLKRTSHTGPSTNACSLTFSGH-----------T---NEKNFVGLSTADGYIACGS 1025 (1092)
Q Consensus 965 fs-~~~~L~Sgs-~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h-----------~---~~V~~v~~spdg~~lasgs 1025 (1092)
++ ++++|+.+. ..+.|.+||+.... ....+..+... . ..-..+.++|||++|+++.
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~d~~-----~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDISNPF-----KPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECSSTT-----SCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCC-----CcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 88 677776555 57899999996321 12333333211 0 1246789999999888877
No 493
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.41 E-value=4.5e-05 Score=82.29 Aligned_cols=203 Identities=11% Similarity=0.078 Sum_probs=135.5
Q ss_pred eEEEeeccCcc--EEEEEEecCCCCEEEEEeCCC--cEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCCeE
Q 001366 863 TVSHYIEHEKR--AWSVDFSQVHPTKLASGSDDC--SVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYRT 938 (1092)
Q Consensus 863 ~i~~l~~h~~~--V~sv~fsp~~~~~laSgs~Dg--~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I 938 (1092)
.+.++ .|... ...+.|+ ++.++.+.+.+| .|+++|+.+++.+..+............+++..+.++.-.++.+
T Consensus 33 vv~~~-phd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEe-cCCCCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEE
Confidence 45566 35544 3788887 467778888776 89999999999999988666654443444455566666679999
Q ss_pred EEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcC----CC-CCeEEEE
Q 001366 939 YCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSG----HT-NEKNFVG 1013 (1092)
Q Consensus 939 ~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~----h~-~~V~~v~ 1013 (1092)
.+||..+.+. +.++.... .-..+++ +++.|+.+..+++|.++|..+ ...+.++.- .. ..++.+.
T Consensus 110 ~v~D~~t~~~-~~ti~~~~-eG~glt~-dg~~L~~SdGs~~i~~iDp~T--------~~v~~~I~V~~~g~~~~~lNELe 178 (262)
T 3nol_A 110 FVWNIRNLRQ-VRSFNYDG-EGWGLTH-NDQYLIMSDGTPVLRFLDPES--------LTPVRTITVTAHGEELPELNELE 178 (262)
T ss_dssp EEEETTTCCE-EEEEECSS-CCCCEEE-CSSCEEECCSSSEEEEECTTT--------CSEEEEEECEETTEECCCEEEEE
T ss_pred EEEECccCcE-EEEEECCC-CceEEec-CCCEEEEECCCCeEEEEcCCC--------CeEEEEEEeccCCccccccceeE
Confidence 9999998764 44443211 1234444 566676666678899999884 333444332 11 3356677
Q ss_pred EecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEec
Q 001366 1014 LSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANS 1082 (1092)
Q Consensus 1014 ~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~ 1082 (1092)
|. +|..+|..-.++.|.+.|..+++.+..+.++...+.... ........+.|||+|+++.|..+|.
T Consensus 179 ~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~--~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 179 WV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGP--LPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCS--CCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCcccccc--ccCcCCceEEEEEcCCCCEEEEECC
Confidence 76 666555555688999999999999999886432211100 1122456899999999888777764
No 494
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.37 E-value=0.00016 Score=78.41 Aligned_cols=220 Identities=12% Similarity=0.049 Sum_probs=136.7
Q ss_pred CEEEEEEcCCCCE-EEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECC
Q 001366 781 VICSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDAC 859 (1092)
Q Consensus 781 ~V~sl~fspdg~~-latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~ 859 (1092)
.+.+++|++++.. +++-..++.|.+++...... ............+++++++.+.++++....+.|.+++..
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-------~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~ 109 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-------TTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMD 109 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-------EEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-------EEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcC
Confidence 4578999996654 44555678899999865211 011111224678999998745566666667899999986
Q ss_pred CCceEEEeeccCccEEEEEEecCCCCEEEEEeC--CCcEEEEecCCCceeeeEe--cCCceEEEEEccCCCeEEEEEECC
Q 001366 860 TGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSD--DCSVKLWNINEKNSLATIK--NIANVCCVQFSAHSSHLLAFGSAD 935 (1092)
Q Consensus 860 tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~--Dg~I~iWDl~~~~~l~~l~--~~~~V~sl~fsp~~~~~latgs~D 935 (1092)
.................++++|..+.++++... .+.|..+++.. .....+. .......++++|++..++++....
T Consensus 110 g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~ 188 (267)
T 1npe_A 110 GTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGT 188 (267)
T ss_dssp SCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCC
Confidence 443222222222457899999943444444433 46888888763 3333332 234578999999877677777778
Q ss_pred CeEEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEE-CCCeEEEEEcCCCCCCCCCCCceeEEEcCCC-CCeEEEE
Q 001366 936 YRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTAS-TDNKLKLWDLKRTSHTGPSTNACSLTFSGHT-NEKNFVG 1013 (1092)
Q Consensus 936 g~I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs-~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~-~~V~~v~ 1013 (1092)
+.|.++|+..... .....+ ......++.. ++.|+.+. ..+.|.++|.. .+..+.++.... .....++
T Consensus 189 ~~I~~~~~~g~~~-~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~--------~g~~~~~i~~g~~~~p~gi~ 257 (267)
T 1npe_A 189 HRAECLNPAQPGR-RKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLA--------ISKEMDTFHPHKQTRLYGIT 257 (267)
T ss_dssp TEEEEEETTEEEE-EEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEETT--------TTEEEEEECCSSCCCCCCEE
T ss_pred CEEEEEecCCCce-EEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEeCC--------CCCceEEEccccccccceee
Confidence 9999999875322 222222 2344667665 45555444 56899999987 344555654322 2456778
Q ss_pred EecCCC
Q 001366 1014 LSTADG 1019 (1092)
Q Consensus 1014 ~spdg~ 1019 (1092)
+.|++.
T Consensus 258 ~~~~~~ 263 (267)
T 1npe_A 258 IALSQC 263 (267)
T ss_dssp EECSCC
T ss_pred ecCccC
Confidence 888764
No 495
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.31 E-value=0.00016 Score=77.30 Aligned_cols=205 Identities=10% Similarity=0.068 Sum_probs=135.7
Q ss_pred ceEEEeeccCcc--EEEEEEecCCCCEEEEEeCCC--cEEEEecCCCceeeeEecCCceEEEEEccCCCeEEEEEECCCe
Q 001366 862 QTVSHYIEHEKR--AWSVDFSQVHPTKLASGSDDC--SVKLWNINEKNSLATIKNIANVCCVQFSAHSSHLLAFGSADYR 937 (1092)
Q Consensus 862 ~~i~~l~~h~~~--V~sv~fsp~~~~~laSgs~Dg--~I~iWDl~~~~~l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~ 937 (1092)
+.+.++ .|... ...+.|+. +.++.|.+.+| .|+.+|+.+++.+..+............+.+..+....-.++.
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEEc-CCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCE
Confidence 345566 46543 56899985 56777777754 8999999999999998866655444444445566777777999
Q ss_pred EEEEEcCCCCcceEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCC-----CCeEEE
Q 001366 938 TYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHT-----NEKNFV 1012 (1092)
Q Consensus 938 I~vwDlr~~~~~~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~-----~~V~~v 1012 (1092)
+.+||..+.+. +.++.... .-..+++ +++.|+.+..++.|.++|..+ ...+.++.-.. ..++-+
T Consensus 87 v~v~D~~tl~~-~~ti~~~~-~Gwglt~-dg~~L~vSdgs~~l~~iDp~t--------~~~~~~I~V~~~g~~~~~lNeL 155 (243)
T 3mbr_X 87 GFVYDLATLTP-RARFRYPG-EGWALTS-DDSHLYMSDGTAVIRKLDPDT--------LQQVGSIKVTAGGRPLDNLNEL 155 (243)
T ss_dssp EEEEETTTTEE-EEEEECSS-CCCEEEE-CSSCEEEECSSSEEEEECTTT--------CCEEEEEECEETTEECCCEEEE
T ss_pred EEEEECCcCcE-EEEEeCCC-CceEEee-CCCEEEEECCCCeEEEEeCCC--------CeEEEEEEEccCCcccccceee
Confidence 99999998764 44443222 2245554 466666666788999999884 33444443211 234566
Q ss_pred EEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEec
Q 001366 1013 GLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANS 1082 (1092)
Q Consensus 1013 ~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~ 1082 (1092)
.+. +|..+|..-.++.|.+-|..+++.+..+.++...+.... .........++|||+|++..|...|.
T Consensus 156 e~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~-~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 156 EWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADA-LTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTS-CCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCcccccc-ccCCcCCceEEEEEcCCCCEEEEECC
Confidence 665 565555554688999999999999999887543221111 00123457899999998877776653
No 496
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.29 E-value=1.8e-05 Score=94.71 Aligned_cols=241 Identities=13% Similarity=0.065 Sum_probs=158.3
Q ss_pred CCCCEEEEEe-CCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEE-e-cCCCCEEEEEE-----------------
Q 001366 789 RDEDHFAAAG-VSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCW-N-NYIKNYLASAD----------------- 848 (1092)
Q Consensus 789 pdg~~latgg-~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~-s-p~~~~~LaSgs----------------- 848 (1092)
+||+++.... .++.|.+.|+..... . ..+..........+++ . |+ +.++++++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~---~---~ii~ip~g~~phg~~~~~~p~-~~~v~~~~~~~~p~~~dg~~l~~~~ 171 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKC---D---AILEIPNAKGIHGLRPQKWPR-SNYVFCNGEDETPLVNDGTNMEDVA 171 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEE---E---EEEECSSCCSEEEEEECCSSB-CSEEEEEECSCEESSCSSSSTTCGG
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceE---e---eEEeCCCCCCCcceeeeecCC-CcEEEEecccccccCCCCccccccc
Confidence 4677665554 456799999875210 0 0112223456778887 4 76 66776663
Q ss_pred -CCCcEEEEECCCCceEEEeeccCccEEEEEEecCCCCEEEEEeCCC---------------------------------
Q 001366 849 -YDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDC--------------------------------- 894 (1092)
Q Consensus 849 -~DgtV~IWD~~tg~~i~~l~~h~~~V~sv~fsp~~~~~laSgs~Dg--------------------------------- 894 (1092)
+++.+.++|..+.+.+.++.--. ....++++| +++++++.+.+.
T Consensus 172 ~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk 249 (595)
T 1fwx_A 172 NYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGD 249 (595)
T ss_dssp GEEEEEEEEETTTTEEEEEEEESS-CCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTC
T ss_pred ccCceEEEEECCCCeEEEEEEeCC-CccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCC
Confidence 45789999999998888776322 446778899 788887777553
Q ss_pred -----cEEEEecCC--Cce-eeeEecCCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCc-----------ceEEecC
Q 001366 895 -----SVKLWNINE--KNS-LATIKNIANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARA-----------PWCVLAG 955 (1092)
Q Consensus 895 -----~I~iWDl~~--~~~-l~~l~~~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~-----------~~~~l~~ 955 (1092)
.|.|.|.++ ++. +..+.......++.++|||.++++++..+.+|.++|+.+.+. .+... .
T Consensus 250 ~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~ 328 (595)
T 1fwx_A 250 YQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-E 328 (595)
T ss_dssp SEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-B
T ss_pred eeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-C
Confidence 488888887 555 567776667789999999998888888899999999986421 12222 2
Q ss_pred CCCCeEEEEEcCCCEEE-EEECCCeEEEEEcCCCC--CCCCCCCceeEEEcCCCCCe-E----EEEEecCCCEEEEEec-
Q 001366 956 HEKAVSYVKFLDSGTLV-TASTDNKLKLWDLKRTS--HTGPSTNACSLTFSGHTNEK-N----FVGLSTADGYIACGSE- 1026 (1092)
Q Consensus 956 H~~~V~~v~fs~~~~L~-Sgs~Dg~I~vWDl~~~~--~~~~~~~~~~~~l~~h~~~V-~----~v~~spdg~~lasgs~- 1026 (1092)
-......++|++++.++ +.-.|++|.+||+.+.. ..+......+..+..|-.+- . .+.++|||++|++...
T Consensus 329 vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~ 408 (595)
T 1fwx_A 329 LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKF 408 (595)
T ss_dssp CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESC
T ss_pred CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCC
Confidence 23457889999544544 56689999999997410 00001134566666665432 1 2346899999887752
Q ss_pred --CCc----------EEEEeCCCCC
Q 001366 1027 --SNE----------VYAYHRSLPM 1039 (1092)
Q Consensus 1027 --Dg~----------I~Iwd~~~~~ 1039 (1092)
|.. -.++|++.++
T Consensus 409 skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 409 SKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred CccccccCCCCCCCcceEEEcCCCc
Confidence 432 1788886544
No 497
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.29 E-value=0.00094 Score=84.42 Aligned_cols=272 Identities=9% Similarity=0.081 Sum_probs=171.4
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCC
Q 001366 782 ICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTG 861 (1092)
Q Consensus 782 V~sl~fspdg~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg 861 (1092)
|.++..++++.+.+ |..++.|..|+..... .. ... .......|.++...++ +. |..++.++-+.+||..++
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~---~~-~~~--~~~~~~~i~~i~~d~~-g~-lwigt~~~Gl~~~~~~~~ 245 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKT---FE-KVI--PILGTKQIQAILQQSP-TR-IWVATEGAGLFLINPKTK 245 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCC---EE-ECC------CCCEEEEEEEET-TE-EEEEEBSSCEEEEETTTT
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCe---EE-Eec--CCCCCCeeEEEEEcCC-CC-EEEEECCCCeEEEeCCCC
Confidence 88888888887665 5555568888865421 11 000 1113467888887775 44 444555555889998776
Q ss_pred ceEEEeec-------cCccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEe--------cCCceEEEEEccCCC
Q 001366 862 QTVSHYIE-------HEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIK--------NIANVCCVQFSAHSS 926 (1092)
Q Consensus 862 ~~i~~l~~-------h~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~--------~~~~V~sl~fsp~~~ 926 (1092)
+....... ....|.++...+ ++. |..|+.+ -|.+||..++....... ....|.++...++|.
T Consensus 246 ~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~ 322 (795)
T 4a2l_A 246 EIKNYLHSPSNPKSISSNYIRSLAMDS-QNR-LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG 322 (795)
T ss_dssp EEEEECCCTTCTTSCSCSBEEEEEECT-TSC-EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC
T ss_pred eEEEeecCCCCccccCCCeEEEEEEcC-CCC-EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC
Confidence 54332211 135689998877 555 4445555 58899987765432211 124699999999885
Q ss_pred eEEEEEECCCeEEEEEcCCCCcceEEecC-------CCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCcee
Q 001366 927 HLLAFGSADYRTYCYDLRNARAPWCVLAG-------HEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACS 999 (1092)
Q Consensus 927 ~~latgs~Dg~I~vwDlr~~~~~~~~l~~-------H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~ 999 (1092)
|..|+.++-|.+||..+.. ...+.. ....|.++.....+.|..|+.++-|..||..+.. .
T Consensus 323 --lWigt~~~Gl~~~~~~~~~--~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~---------~ 389 (795)
T 4a2l_A 323 --MWLGTYFGGLNYYHPIRNR--FKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQR---------F 389 (795)
T ss_dssp --EEEEESSSCEEEECGGGGS--SEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCC---------E
T ss_pred --EEEEECCCCeEEeCCCccc--ceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCc---------E
Confidence 6668888889999876543 222211 2346899988766778889888889999976321 1
Q ss_pred EEEc---------CCCCCeEEEEEecCCCEEEEEecCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEE
Q 001366 1000 LTFS---------GHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCW 1070 (1092)
Q Consensus 1000 ~~l~---------~h~~~V~~v~~spdg~~lasgs~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~ 1070 (1092)
..+. -..+.|.++...++|..|..|+.++-|.+|+..+++.. .+... .. ......|.+++.
T Consensus 390 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~-----~~----~l~~~~v~~i~~ 459 (795)
T 4a2l_A 390 TSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE-NFNQR-----NS----QLVNENVYAILP 459 (795)
T ss_dssp EEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE-EECTT-----TS----CCSCSCEEEEEE
T ss_pred EEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE-EeecC-----CC----CcCCCeeEEEEE
Confidence 1111 12356889998888885666777777999998766532 22110 00 123457999999
Q ss_pred eCCCCEEEEEecCCeEEEEE
Q 001366 1071 RRRSDMVVAANSSGCIKVLQ 1090 (1092)
Q Consensus 1071 spd~~~Lasgs~DG~V~vW~ 1090 (1092)
.+++.+.++.. +| |.+|+
T Consensus 460 d~~g~lwigt~-~G-l~~~~ 477 (795)
T 4a2l_A 460 DGEGNLWLGTL-SA-LVRFN 477 (795)
T ss_dssp CSSSCEEEEES-SC-EEEEE
T ss_pred CCCCCEEEEec-Cc-eeEEe
Confidence 99888776654 55 54554
No 498
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.28 E-value=8.6e-05 Score=80.83 Aligned_cols=193 Identities=6% Similarity=-0.040 Sum_probs=129.6
Q ss_pred eEEEEEecCCCCEEEEEEC--CCcEEEEECCCCceEEEeeccCc-cEEEEEEecCCCCEEEEEeCCCcEEEEecCCCcee
Q 001366 831 LSCVCWNNYIKNYLASADY--DGVVKLWDACTGQTVSHYIEHEK-RAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSL 907 (1092)
Q Consensus 831 V~~v~~sp~~~~~LaSgs~--DgtV~IWD~~tg~~i~~l~~h~~-~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l 907 (1092)
...+.|+++ +.++++.+. ++.|++.|+.+++.+..+.-... ....+++.. ..+.++.-.++.+.++|..+.+.+
T Consensus 23 ~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g--~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 23 TQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN--EKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp EEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET--TEEEEEETTCSEEEEEETTTTEEE
T ss_pred cccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC--CEEEEEEecCCEEEEEECCCCcEE
Confidence 578999987 655555543 58999999999998888652221 223455543 345555556899999999999999
Q ss_pred eeEecC-CceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcceEEecC-C---CCCeEEEEEcCCCEEEEEECCCeEEE
Q 001366 908 ATIKNI-ANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAG-H---EKAVSYVKFLDSGTLVTASTDNKLKL 982 (1092)
Q Consensus 908 ~~l~~~-~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~~~~l~~-H---~~~V~~v~fs~~~~L~Sgs~Dg~I~v 982 (1092)
.++... ..- ..+++++..++++ ..++.|.++|..+.+.......+ + -..+..+.|.++..++....++.|.+
T Consensus 100 ~~i~~g~~~g--~glt~Dg~~l~vs-~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~v 176 (266)
T 2iwa_A 100 KNFTHQMKDG--WGLATDGKILYGS-DGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIAR 176 (266)
T ss_dssp EEEECCSSSC--CEEEECSSSEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEE
T ss_pred EEEECCCCCe--EEEEECCCEEEEE-CCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEE
Confidence 998754 222 3355677655554 46899999999887643333222 1 12366788875533444446789999
Q ss_pred EEcCCCCCCCCCCCceeEEEcCC-------------CCCeEEEEEecCCC-EEEEEecCCcEEEEeCCC
Q 001366 983 WDLKRTSHTGPSTNACSLTFSGH-------------TNEKNFVGLSTADG-YIACGSESNEVYAYHRSL 1037 (1092)
Q Consensus 983 WDl~~~~~~~~~~~~~~~~l~~h-------------~~~V~~v~~spdg~-~lasgs~Dg~I~Iwd~~~ 1037 (1092)
.|..+ +..+..+.-. ....+.++|+|+++ +++++...+.|++.++..
T Consensus 177 ID~~t--------g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 177 ISAKD--------GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EETTT--------CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EECCC--------CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 99984 4445555321 13468999999976 566677788888887643
No 499
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.26 E-value=7.5e-05 Score=92.63 Aligned_cols=232 Identities=10% Similarity=0.109 Sum_probs=143.2
Q ss_pred CCEEEEEECCCcEEEEECCCCceEEEeeccC----ccEEE-EEEecCCCCEEEEEeC------CCcEEEEecCCCceeee
Q 001366 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHE----KRAWS-VDFSQVHPTKLASGSD------DCSVKLWNINEKNSLAT 909 (1092)
Q Consensus 841 ~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h~----~~V~s-v~fsp~~~~~laSgs~------Dg~I~iWDl~~~~~l~~ 909 (1092)
+..|+.++.|+.|..+|..+|+.+..+.... ..+.+ .... ++ .++.++. ++.|..||..+|+.+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~--~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVV--KG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEE--TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEE--CC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 4578888899999999999999888776421 11111 1111 33 4555443 58999999999999988
Q ss_pred EecC--C------------------------------ceEEEEEccCCCeEEEEEECCC-------------------eE
Q 001366 910 IKNI--A------------------------------NVCCVQFSAHSSHLLAFGSADY-------------------RT 938 (1092)
Q Consensus 910 l~~~--~------------------------------~V~sl~fsp~~~~~latgs~Dg-------------------~I 938 (1092)
+... . ....++++|... ++++++.++ .|
T Consensus 194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v 272 (668)
T 1kv9_A 194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELD-LLYVGTGNGSPWNREVRSPGGGDNLYLSSI 272 (668)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence 7631 0 012467888775 777777666 49
Q ss_pred EEEEcCCCCcceEEecC-CC-------CCeEEEEEc-CCC---EEEEEECCCeEEEEEcCCCCCCCC-------------
Q 001366 939 YCYDLRNARAPWCVLAG-HE-------KAVSYVKFL-DSG---TLVTASTDNKLKLWDLKRTSHTGP------------- 993 (1092)
Q Consensus 939 ~vwDlr~~~~~~~~l~~-H~-------~~V~~v~fs-~~~---~L~Sgs~Dg~I~vWDl~~~~~~~~------------- 993 (1092)
..+|..+++..+..-.. |. .++....+. ++. .++.++.+|.+.++|..+++....
T Consensus 273 ~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d 352 (668)
T 1kv9_A 273 LAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVD 352 (668)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEEC
T ss_pred EEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccc
Confidence 99999999876554433 32 222222222 343 588899999999999986542100
Q ss_pred -CCCceeE------------EEcCCCC--CeEEEEEecCCCEEEEEe---------------------------------
Q 001366 994 -STNACSL------------TFSGHTN--EKNFVGLSTADGYIACGS--------------------------------- 1025 (1092)
Q Consensus 994 -~~~~~~~------------~l~~h~~--~V~~v~~spdg~~lasgs--------------------------------- 1025 (1092)
..+..+. .+.+... .-..++++|+.+.+....
T Consensus 353 ~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p 432 (668)
T 1kv9_A 353 LATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVP 432 (668)
T ss_dssp TTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCC
T ss_pred cccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCC
Confidence 0000000 0000000 011267888766554321
Q ss_pred ---cCCcEEEEeCCCCCceeeeeccccCCCCCccccCCCCCCEEEEEEeCCCCEEEEEecCCeEEEEEc
Q 001366 1026 ---ESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQM 1091 (1092)
Q Consensus 1026 ---~Dg~I~Iwd~~~~~~i~~~~~~~~~~i~~~~~~~~h~~~V~sva~spd~~~Lasgs~DG~V~vW~l 1091 (1092)
.+|.|+.||..+++.+.+++.+. .+....+...+.+|+.++.||.|++||.
T Consensus 433 ~~~~~g~l~A~D~~tG~~~W~~~~~~---------------~~~~~~~~t~gg~vf~g~~dg~l~a~d~ 486 (668)
T 1kv9_A 433 AAVVSGALLAWDPVKQKAAWKVPYPT---------------HWNGGTLSTAGNLVFQGTAAGQMHAYSA 486 (668)
T ss_dssp GGGCEEEEEEEETTTTEEEEEEEESS---------------SCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred CCCccceEEEEeCCCCcEEEEccCCC---------------CCcCceeEeCCCEEEEECCcccchhhhh
Confidence 23779999999998888776321 1222334457888889999999999984
No 500
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.24 E-value=4.6e-05 Score=84.56 Aligned_cols=216 Identities=11% Similarity=0.032 Sum_probs=141.9
Q ss_pred CCEEEEEeCCCcEEEEEcCCCCCCCcccccceeeecCCCCeEEEEEecCCCCEEEEEECCCcEEEEECCCCceEEEeecc
Q 001366 791 EDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEH 870 (1092)
Q Consensus 791 g~~latgg~D~~I~Iwd~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~LaSgs~DgtV~IWD~~tg~~i~~l~~h 870 (1092)
+..+..++.++.|..||... . ... ........+.++...++ +. |..++.++.|..||.. ++.+..+...
T Consensus 107 ~~~l~v~t~~~~l~~~d~~g-~---~~~----~~~~~~~~~~~~~~~~~-g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~ 175 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTDG-T---EKW----RFKTKKAIYATPIVSED-GT-IYVGSNDNYLYAINPD-GTEKWRFKTN 175 (330)
T ss_dssp TTEEEEECTTSEEEEECTTS-C---EEE----EEECSSCCCSCCEECTT-SC-EEEECTTSEEEEECTT-SCEEEEEECS
T ss_pred CCEEEEEecCCEEEEEcCCC-C---EEE----EEcCCCceeeeeEEcCC-CE-EEEEcCCCEEEEECCC-CCEeEEEecC
Confidence 45677777888899888652 1 000 11112334455566554 44 6667788999999998 8877777655
Q ss_pred CccEEEEEEecCCCCEEEEEeCCCcEEEEecCCCceeeeEec-CCceEEEEEccCCCeEEEEEECCCeEEEEEcCCCCcc
Q 001366 871 EKRAWSVDFSQVHPTKLASGSDDCSVKLWNINEKNSLATIKN-IANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAP 949 (1092)
Q Consensus 871 ~~~V~sv~fsp~~~~~laSgs~Dg~I~iWDl~~~~~l~~l~~-~~~V~sl~fsp~~~~~latgs~Dg~I~vwDlr~~~~~ 949 (1092)
...+.++...+ ++.+ ..++ +.|..|| .+++.+..+.. ...+.++...+++. +.+++.++.|..+|. +++.
T Consensus 176 ~~~~~~~~~d~-~g~l-~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl~~~~~-~g~~- 246 (330)
T 3hxj_A 176 DAITSAASIGK-DGTI-YFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT--IYVTSLDGHLYAINP-DGTE- 246 (330)
T ss_dssp SCCCSCCEECT-TCCE-EEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC--EEEEETTTEEEEECT-TSCE-
T ss_pred CCceeeeEEcC-CCEE-EEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe--EEEEcCCCeEEEECC-CCCE-
Confidence 56677777765 5554 4444 7899999 77777766653 35578888888874 666778889999974 3333
Q ss_pred eEEecCCCCCeEEEEEcCCCEEEEEECCCeEEEEEcCCCCCCCCCCCceeEEEcCCCCCeEEEEEecCCCEEEEEecCCc
Q 001366 950 WCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGPSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNE 1029 (1092)
Q Consensus 950 ~~~l~~H~~~V~~v~fs~~~~L~Sgs~Dg~I~vWDl~~~~~~~~~~~~~~~~l~~h~~~V~~v~~spdg~~lasgs~Dg~ 1029 (1092)
+..+......+..+.+.+++.|..++.+|.|..+|.. +.....+......+.++...++|. |..|+.+|.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~~---------g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~ 316 (330)
T 3hxj_A 247 KWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINPD---------GTEKWNFETGSWIIATPVIDENGT-IYFGTRNGK 316 (330)
T ss_dssp EEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECTT---------SCEEEEEECSSCCCSCCEECTTCC-EEEECTTSC
T ss_pred eEEeeCCCCccccceEcCCCeEEEecCCCCEEEECCC---------CcEEEEEEcCCccccceEEcCCCE-EEEEcCCCe
Confidence 3333333344445555556788889999899999853 233444444455566777777776 555888999
Q ss_pred EEEEeCC
Q 001366 1030 VYAYHRS 1036 (1092)
Q Consensus 1030 I~Iwd~~ 1036 (1092)
+++....
T Consensus 317 ~~~~~~~ 323 (330)
T 3hxj_A 317 FYALFNL 323 (330)
T ss_dssp EEEEEC-
T ss_pred EEEEecc
Confidence 9988654
Done!