Query 001374
Match_columns 1091
No_of_seqs 265 out of 292
Neff 4.8
Searched_HMMs 13730
Date Tue Mar 26 00:51:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001374.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/001374hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fxka_ a.2.5.1 (A:) Prefoldin 81.7 10 0.00076 33.2 13.0 31 894-924 73-103 (107)
2 d1fxkc_ a.2.5.1 (C:) Prefoldin 76.7 19 0.0014 32.2 13.5 28 193-220 5-32 (133)
3 d1fxka_ a.2.5.1 (A:) Prefoldin 76.7 20 0.0014 31.3 13.2 14 835-848 20-33 (107)
4 d1fxkc_ a.2.5.1 (C:) Prefoldin 72.2 33 0.0024 30.5 13.9 28 812-839 4-31 (133)
5 d2efla1 a.238.1.4 (A:1-288) Fo 47.8 1.2E+02 0.0086 28.9 22.1 11 155-165 99-109 (288)
6 d1f5na1 a.114.1.1 (A:284-583) 40.9 1.6E+02 0.011 28.3 23.2 16 99-114 68-83 (300)
7 d1f5na1 a.114.1.1 (A:284-583) 37.2 1.8E+02 0.013 27.9 20.0 17 115-131 149-165 (300)
8 d1urua_ a.238.1.1 (A:) Amphiph 23.7 2.5E+02 0.018 25.3 16.2 48 809-856 12-59 (217)
9 d1eq1a_ a.63.1.1 (A:) Apolipop 23.6 78 0.0057 29.9 7.3 52 119-173 54-105 (166)
10 d1gqea_ e.38.1.1 (A:) Polypept 23.5 2.3E+02 0.017 29.3 11.9 107 846-968 1-114 (362)
11 d1quua1 a.7.1.1 (A:1-124) alph 20.7 2.2E+02 0.016 23.7 12.8 18 828-845 19-36 (124)
No 1
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=81.73 E-value=10 Score=33.20 Aligned_cols=31 Identities=23% Similarity=0.330 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 001374 894 KIESLENELQDEKMSHHNAMAKCKELEEQLQ 924 (1091)
Q Consensus 894 KVesLE~ELe~ek~~~eEleaK~~eLEeQLe 924 (1091)
+++.|+.++..+..+...+..++.+++.+|.
T Consensus 73 ~~e~l~~~i~~l~~q~~~l~~~l~~~~~~l~ 103 (107)
T d1fxka_ 73 KLETLQLREKTIERQEERVMKKLQEMQVNIQ 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444444444444444443
No 2
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=76.71 E-value=19 Score=32.17 Aligned_cols=28 Identities=4% Similarity=0.055 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001374 193 NFEQELLRSAAENATLSRSLQERSNMLI 220 (1091)
Q Consensus 193 ElEkeLeelkaEl~aLeeqLEelqeeI~ 220 (1091)
++..+++.++.++..+..++..++..+.
T Consensus 5 eL~~~~~~l~~~l~~l~~~i~~l~~~~~ 32 (133)
T d1fxkc_ 5 EIVAQLNIYQSQVELIQQQMEAVRATIS 32 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333334444444433333333333
No 3
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=76.69 E-value=20 Score=31.32 Aligned_cols=14 Identities=21% Similarity=0.107 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHHHH
Q 001374 835 TKSQLYETEQLLAE 848 (1091)
Q Consensus 835 l~~qLqelE~~LeE 848 (1091)
+..++..++..+.|
T Consensus 20 ~~~q~~~le~q~~E 33 (107)
T d1fxka_ 20 ISVQKQTVEMQINE 33 (107)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 4
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=72.21 E-value=33 Score=30.53 Aligned_cols=28 Identities=7% Similarity=0.215 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001374 812 EELKLEKDNLATDLARCTENLEMTKSQL 839 (1091)
Q Consensus 812 EqLEsEkeelE~eLee~~eklEel~~qL 839 (1091)
++|...+..++..+..++.++..+...+
T Consensus 4 ~eL~~~~~~l~~~l~~l~~~i~~l~~~~ 31 (133)
T d1fxkc_ 4 AEIVAQLNIYQSQVELIQQQMEAVRATI 31 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444443333333333
No 5
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.80 E-value=1.2e+02 Score=28.90 Aligned_cols=11 Identities=9% Similarity=0.172 Sum_probs=4.2
Q ss_pred HHHHHhhhHHH
Q 001374 155 MRQIRNLKEEH 165 (1091)
Q Consensus 155 ~~qLr~~reeq 165 (1091)
.+.|...+.++
T Consensus 99 ~~~l~~~~~~~ 109 (288)
T d2efla1 99 IVDLARYVQEL 109 (288)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 6
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.86 E-value=1.6e+02 Score=28.29 Aligned_cols=16 Identities=25% Similarity=0.503 Sum_probs=11.1
Q ss_pred hHHHHhhHHHHHHHhh
Q 001374 99 EDLVKQHTKVAEEAVS 114 (1091)
Q Consensus 99 d~lvkqh~kvaeeav~ 114 (1091)
+.|..-|.++..+|+.
T Consensus 68 eel~~~h~~~~~~a~~ 83 (300)
T d1f5na1 68 QELLDLHRDSEREAIE 83 (300)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4566777777777765
No 7
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.15 E-value=1.8e+02 Score=27.86 Aligned_cols=17 Identities=18% Similarity=0.171 Sum_probs=7.0
Q ss_pred hhHHHHHHHHHHHHhHH
Q 001374 115 GWEKAEAEALALKNHLE 131 (1091)
Q Consensus 115 gwekae~e~~~lK~~Le 131 (1091)
|+.....+...++....
T Consensus 149 ~~~~~~~~~~~~~~~~~ 165 (300)
T d1f5na1 149 GYRLFVQKLQDLKKKYY 165 (300)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 34444444444444333
No 8
>d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=23.70 E-value=2.5e+02 Score=25.32 Aligned_cols=48 Identities=6% Similarity=0.030 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001374 809 EEFEELKLEKDNLATDLARCTENLEMTKSQLYETEQLLAEVKAQLASA 856 (1091)
Q Consensus 809 EelEqLEsEkeelE~eLee~~eklEel~~qLqelE~~LeELesQLesL 856 (1091)
++++.+...+..++..+..+...+......++.+-.....+-.-+..+
T Consensus 12 ~~fe~~~~~~~~~e~~l~~l~k~~~~~~~~~~~~~~~~~~~~~~l~~l 59 (217)
T d1urua_ 12 EIFDDHLNNFNRQQASANRLQKEFNNYIRCVRAAQAASKTLMDSVCEI 59 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567888888888888888887777777777776665555555555444
No 9
>d1eq1a_ a.63.1.1 (A:) Apolipophorin-III {Manduca sexta [TaxId: 7130]}
Probab=23.56 E-value=78 Score=29.86 Aligned_cols=52 Identities=12% Similarity=0.189 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhHHHHhhhhhhHHHHHhhhhHHHHHHHHHHHhhhHHHHHHHHHHH
Q 001374 119 AEAEALALKNHLESVTLSKLTAEDRAAHLDGALKECMRQIRNLKEEHEQKLQDFV 173 (1091)
Q Consensus 119 ae~e~~~lK~~Le~~~~q~~~le~rv~hLd~aLKec~~qLr~~reeqeqki~~~~ 173 (1091)
++.=+.++...+.++... ..|.|+.-.+-|.-..++||.+-++..+...+++
T Consensus 54 ~~~~~~~l~~~~~Ea~~~---a~dav~qa~~nle~~Aeelrk~~e~ikq~a~d~~ 105 (166)
T d1eq1a_ 54 LSAFSSSLQGAISDANGK---AKEALEQARQNVEKTAEELRKAHPDVEKEANAFK 105 (166)
T ss_dssp HHHHHHHHHHHHTTCSST---HHHHHHHHHHHHHHHHHGGGGCSHHHHHTCSSSH
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 333444555555555444 5566777789999999999999998887766664
No 10
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=23.46 E-value=2.3e+02 Score=29.32 Aligned_cols=107 Identities=10% Similarity=0.160 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhhHHHHH--HHHHHHHhHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 001374 846 LAEVKAQLASAQKSNSLAET--QLKCMAESYRSLETHAQELE-----AEVNLLRAKIESLENELQDEKMSHHNAMAKCKE 918 (1091)
Q Consensus 846 LeELesQLesLqeS~selEe--qLk~~~e~ledLesrL~eLe-----aElkeLqeKVesLE~ELe~ek~~~eEleaK~~e 918 (1091)
|.+++.++..+...+..+.. ++.....++.+|+.++..=. .++..+..++..|+..++ ....+...+.+
T Consensus 1 ~~~l~~~i~eL~~rl~~Lr~~fDld~kk~Rl~ELE~~lsdP~fW~D~~kAqkl~KE~s~L~~iVe----~~~~l~~~leD 76 (362)
T d1gqea_ 1 INPVNNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVD----TLDQMKQGLED 76 (362)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHSGGGGGSHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcCChhhhCHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Q ss_pred HHHHHHhhhhhhcccchhHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001374 919 LEEQLQRNENCAVCSSEADENKIKQDRDLAAAAERLAECQETILLLGKQL 968 (1091)
Q Consensus 919 LEeQLe~~~~~~lk~q~dkdLKikqEkEIaaAeeKLAEcQeTI~sLEKQL 968 (1091)
+++=++-.. ....+..+..+...+..+...+..|+-.+
T Consensus 77 l~eL~Ela~------------ee~deel~~e~~~~l~~l~~~l~~le~~l 114 (362)
T d1gqea_ 77 VSGLLELAV------------EADDEETFNEAVAELDALEEKLAQLEFRR 114 (362)
T ss_dssp HHHHHHHHH------------HHTCHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHhh------------hhhhHHHHHHHHHHHHHHhhhhhHHHHhh
No 11
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.75 E-value=2.2e+02 Score=23.68 Aligned_cols=18 Identities=17% Similarity=0.272 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 001374 828 CTENLEMTKSQLYETEQL 845 (1091)
Q Consensus 828 ~~eklEel~~qLqelE~~ 845 (1091)
+...+..+...+.+.+..
T Consensus 19 F~~~~~~l~~Wl~~~e~~ 36 (124)
T d1quua1 19 FRQKASTHETWAYGKEQI 36 (124)
T ss_dssp HHHHHHHHHHHTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334444444444444333
Done!