Your job contains 1 sequence.
>001375
MLLSHLLPLFRRTHWVVFIQRLRLLGANSSALKSSTILTPEDLLQLTSDTHLGLSQECKT
SPQPKFDAVLAFGSLASSAGLCHGASRSALWLPLDLVLEDALDGYQVNATSAIEIITSLI
KTLQAINGTTWHETFLGLWIAALRLVQRERDPIEGPMPRLDPRLCMLFSVTTLLIADLID
EEESAPNDETECGFTYPWKEKKVPGKRRNDLVSSLQVLGDYQGLLTPPQSVVSAANQAAA
KAMLFVSGIDVGSAYFECINMKDMPVNCSGNLRHLIVEACIARNLLDTSAYFWPGYVNGH
INQIPNTVPAQVPGWSSFTKGAPLTPLMVNALVSSPASSLAELEKVFEIAIKGADDEKIF
AATVLCGASLIRGWNIQEHTVQFITRLLSPPAPAEYDGGESHLIGYAPMLNVLMVGISPV
DCVQIFSLHGLIPQLACSLMPICEVFGSCVPNVSWTLPTGEEISAHAVFSNAFALLLKLW
RFNHPPIEHGVGDVPTVGSQLTPEYLLSVRNSHLLSSQSIHQDRNKRRLSAAASSSSPEP
IFVDSFPKLKVWYRQHQRCIAATLSGLVHGTQVHQTVDELLSMMFRKINRASQGLNSVAS
GSSSSSGPGNEDSSLRPKLPAWDILEAVPFVVDAALTGCAHGRLSPRELATGLKDLADFL
PASLATIVSYFSAEVSRGVWKPAFMNGMDWPSPATNLTNVEEHIKKILATTGIDIPSLAA
GGTSPATLPLPLAAFLSLTITYKIDKASERFLNLAGPALESLAAGCPWPCMPIVASLWTQ
KAKRWFDFLVFSASRTVFLHNSDAVVQLLKSCFTATLGLNSNPISSNVGVGALLGHGFGS
HFCGGISPVAPGILYLRVYRSMRDILFITEEIVSLLMHSVREIAFSGLPQEKMEKLKASK
NGMRYGQVSLAAAITRVKLAASLGASLVWLSGGLGSVHSLIYETLPSWFISVHKSEHKYS
DGLVSMLGGYALAYFAVLCGALAWGVDSSSLASKRRPKILGFHMEFLASALDGKISLGCD
SATWHAYVSGFMSLMVSCTPTWVLEVDVEVLKRLSKGLKQWNEEELAIALLGIGGLGTMG
AAAELIIEKDS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001375
(1091 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2088050 - symbol:RFR1 "AT3G23590" species:3702... 3749 0. 1
TAIR|locus:2039356 - symbol:REF4 "AT2G48110" species:3702... 2505 3.9e-311 3
>TAIR|locus:2088050 [details] [associations]
symbol:RFR1 "AT3G23590" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0016592
"mediator complex" evidence=IDA] [GO:2000762 "regulation of
phenylpropanoid metabolic process" evidence=IMP] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] EMBL:CP002686
GO:GO:0006355 GO:GO:0009698 GO:GO:0006351 EMBL:AB023036
GO:GO:0016592 EMBL:AK117119 EMBL:AK230008 IPI:IPI00527950
RefSeq:NP_189001.1 UniGene:At.23102 IntAct:Q9LUG9 PRIDE:Q9LUG9
EnsemblPlants:AT3G23590.1 GeneID:821938 KEGG:ath:AT3G23590
TAIR:At3g23590 eggNOG:NOG257621 HOGENOM:HOG000242204
InParanoid:Q9LUG9 OMA:LTITYKI PhylomeDB:Q9LUG9
ProtClustDB:CLSN2684326 Genevestigator:Q9LUG9 GO:GO:2000762
Uniprot:Q9LUG9
Length = 1309
Score = 3749 (1324.8 bits), Expect = 0., P = 0.
Identities = 725/1065 (68%), Positives = 849/1065 (79%)
Query: 3 LSHLLPLFRRTHWVVFIQRLRLLGANSSALKSSTILTPEDLLQLTSDTHLGLSQECKTSP 62
L +L+ R + W F+Q+++LLG NSSALK S +L DLLQL S+ G S + K +
Sbjct: 236 LLYLVSSNRASKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTS 295
Query: 63 QPKFDAVLAFGSLASSAGLCHGASRSALWLPLDLVLEDALDGYQVNATSAIEIITSLIKT 122
K +A++ FGSL+S AGLCHGAS S+LWLPLDLV EDA+DGYQVN TSAIEIIT L KT
Sbjct: 296 ARKSNAIVDFGSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKT 355
Query: 123 LQAINGTTWHETFLGLWIAALRLVQRERDPIEGPMPRLDPRLCMLFSVTTLLIADLIDEE 182
L+ ING+TWH+TFLGLWIAALRLVQRERDPIEGP+PRLD RLCM + L++A+LI+E
Sbjct: 356 LKEINGSTWHDTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEE- 414
Query: 183 ESAPNDETECGFTYPWKEKKVPGKRRNDLVSSLQVLGDYQGLLTPPQSVVSXXXXXXXXX 242
G K + V K R+DLV+SLQVLGD+ GLL PP+ VVS
Sbjct: 415 ----------G-----KYESVMEKLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKA 459
Query: 243 MLFVSGIDVGSAYFECINMKDMPVNCSGNLRHLIVEACIARNLLDTSAYFWPGYVNGHIN 302
+LF+SG +VG + F+ INMKDMPVNCSGN+RHLIVEACIARN+LD SAY WPGYVNG IN
Sbjct: 460 ILFLSGGNVGKSCFDVINMKDMPVNCSGNMRHLIVEACIARNILDMSAYSWPGYVNGRIN 519
Query: 303 QIPNTVPAQVPGWSSFTKGAPLTPLMVNALVSSPASSLAELEKVFEIAIKGADDEKIFAA 362
QIP ++P +VP WSSF KGAPL MVN LVS PASSLAELEK+FE+A+KG+DDEKI AA
Sbjct: 520 QIPQSLPNEVPCWSSFVKGAPLNAAMVNTLVSVPASSLAELEKLFEVAVKGSDDEKISAA 579
Query: 363 TVLCGASLIRGWNIQEHTVQFITRLLSPPAPAEYDGGESHLIGYAPMLNVLMVGISPVDC 422
TVLCGASL RGWNIQEHTV+++TRLLSPP PA+Y E+HLIGYA MLNV++VGI VD
Sbjct: 580 TVLCGASLTRGWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGSVDS 639
Query: 423 VQIFSLHGLIPQLACSLMPICEVFGSCVPNVSWTLPTGEEISAHAVFSNAFALLLKLWRF 482
+QIFSLHG++PQLACSLMPICE FGS P+VSWTLP+GE ISA++VFSNAF LLLKLWRF
Sbjct: 640 IQIFSLHGMVPQLACSLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKLWRF 699
Query: 483 NHPPIEHGVGDVPTVGSQLTPEYLLSVRNSHLLSSQSIHQDRNKRRLXXXXXXXXPEPIF 542
NHPPIEHGVGDVPTVGSQLTPE+LLSVRNS+L+SS+ + +DRN++RL +P+F
Sbjct: 700 NHPPIEHGVGDVPTVGSQLTPEHLLSVRNSYLVSSEILDRDRNRKRLSEVARAASCQPVF 759
Query: 543 VDSFPKLKVWYRQHQRCIAATLSGLVHGTQVHQTVDELLSMMFRKINRAXXXXXXXXXXX 602
VDSFPKLKVWYRQHQRCIAATLSGL HG+ VHQTV+ LL+M F K+ R
Sbjct: 760 VDSFPKLKVWYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGKV-RGSQTLNPVNSGT 818
Query: 603 XXXXXXXXXXXXLRPKLPAWDILEAVPFVVDAALTGCAHGRLSPRELATGLKDLADFLPA 662
+RP+ PAWDIL+AVP+VVDAALT C HGRLSPR+LATGLKDLADFLPA
Sbjct: 819 SSSSGAASEDSNIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATGLKDLADFLPA 878
Query: 663 SLATIVSYFSAEVSRGVWKPAFMNGMDWPSPATNLTNVEEHIKKILATTGIDIPSLAAGG 722
SLATIVSYFSAEVSRGVWKP FMNG+DWPSPATNL+ VEE+I KILATTG+DIPSLA GG
Sbjct: 879 SLATIVSYFSAEVSRGVWKPVFMNGVDWPSPATNLSTVEEYITKILATTGVDIPSLAPGG 938
Query: 723 XXXXXXXXXXXXXXXXXITYKIDKASERFLNLAGPALESLAAGCPWPCMPIVASLWTQKA 782
ITYKIDKASERFLNLAGPALE LAAGCPWPCMPIVASLWTQKA
Sbjct: 939 SSPATLPLPLAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASLWTQKA 998
Query: 783 KRWFDFLVFSASRTVFLHNSDAVVQLLKSCFTATLGLNSNPISSNVGVGALLGHGFGSHF 842
KRWFDFLVFSASRTVFLHN DAV+QLL++CF+ATLGLN+ P+S++ GVGALLGHGFGSHF
Sbjct: 999 KRWFDFLVFSASRTVFLHNQDAVIQLLRNCFSATLGLNAAPMSNDGGVGALLGHGFGSHF 1058
Query: 843 CGGISPVAPGILYLRVYRSMRDILFITEEIVSLLMHSVREIAFSGLPQEKMEKLKASKNG 902
GGISPVAPGILYLR+YR++RD + ++EEI+SLL+HSV +IA + L +EK+EKLK KNG
Sbjct: 1059 YGGISPVAPGILYLRMYRALRDTVSVSEEILSLLIHSVEDIAQNRLSKEKLEKLKTVKNG 1118
Query: 903 MRYGQVSLAAAITRVKLAASLGASLVWLSGGLGSVHSLIYETLPSWFISVHKSEHKYSDG 962
RYGQ SLA A+T+VKLAASL ASLVWL+GGLG VH LI ET+PSWF+S KS+ +
Sbjct: 1119 SRYGQSSLATAMTQVKLAASLSASLVWLTGGLGVVHVLIKETIPSWFLSTDKSDREQGPS 1178
Query: 963 -LVSMLGGYALAYFAVLCGALAWGVDSSSLASKRRPK-ILGFHMEFLASALDGKISLGCD 1020
LV+ L G+ALAYF VLCGAL WGVDS S ASKRR + ILG H+EF+ASALDGKIS+GC+
Sbjct: 1179 DLVAELRGHALAYFVVLCGALTWGVDSRSSASKRRRQAILGSHLEFIASALDGKISVGCE 1238
Query: 1021 SATWHAYVSGFMSLMVSCTPTWVLEVDVEVLKRLSKGLKQWNEEE 1065
+ATW Y+SG +SLMVSC P WV E+D EVLK LS GL++W ++E
Sbjct: 1239 TATWRTYISGLVSLMVSCLPLWVTEIDTEVLKSLSNGLRKWGKDE 1283
>TAIR|locus:2039356 [details] [associations]
symbol:REF4 "AT2G48110" species:3702 "Arabidopsis
thaliana" [GO:0009698 "phenylpropanoid metabolic process"
evidence=IMP] [GO:0016020 "membrane" evidence=TAS] [GO:2000762
"regulation of phenylpropanoid metabolic process" evidence=IGI]
EMBL:CP002685 GO:GO:0016020 GO:GO:0006355 GO:GO:0009698
GO:GO:0006351 EMBL:AC006072 GO:GO:0016592 eggNOG:NOG257621
HOGENOM:HOG000242204 GO:GO:2000762 EMBL:X96481 IPI:IPI00517586
PIR:E84923 RefSeq:NP_566125.4 UniGene:At.36290 PRIDE:F4IN69
EnsemblPlants:AT2G48110.1 GeneID:819423 KEGG:ath:AT2G48110
TAIR:At2g48110 InParanoid:Q9ZU78 OMA:ALWLPID Uniprot:F4IN69
Length = 1275
Score = 2505 (886.9 bits), Expect = 3.9e-311, Sum P(3) = 3.9e-311
Identities = 483/777 (62%), Positives = 577/777 (74%)
Query: 315 WSSFTKGAPLTPLMVNALVSSPASSLAELEKVFEIAIKGADDEKIFAATVLCGASLIRGW 374
WS KG+PLTP + N+L+++PASSLAE+EK++E+A G++DEKI A++LCGASL RGW
Sbjct: 495 WSLVMKGSPLTPSLTNSLITTPASSLAEIEKMYEVATTGSEDEKIAVASILCGASLFRGW 554
Query: 375 NIQEHTVQFITRLLSPPAPAEYDGGESHLIGYAPMLNVLMVGISPVDCVQIFSLHGLIPQ 434
+IQEH + FI LLSPPAPA+ G SHLI AP LNVL+VGISP+DCV IFSLHG++P
Sbjct: 555 SIQEHVIIFIVTLLSPPAPADLSGSYSHLINSAPFLNVLLVGISPIDCVHIFSLHGVVPL 614
Query: 435 LACSLMPICEVFGSCVPNVSWTLPTGEEISAHAVFSNAFALLLKLWRFNHPPIEHGVGDV 494
LA +LMPICE FGS VPN++WTLPTGE IS+HAVFS AF LLL+LWRF+HPP+++ +GDV
Sbjct: 615 LAGALMPICEAFGSGVPNITWTLPTGELISSHAVFSTAFTLLLRLWRFDHPPLDYVLGDV 674
Query: 495 PTVGSQLTPEYLLSVRNSHLLSSQSIHQDRNKRRLXXXXXXXXPEPIFVDSFPKLKVWYR 554
P VG Q +PEYLL VRN L +DR RR +PIF+DSFP+LK WYR
Sbjct: 675 PPVGPQPSPEYLLLVRNCRLECFGKSPKDRMARRRFSKVIDISVDPIFMDSFPRLKQWYR 734
Query: 555 QHQRCIAATLSGLVHGTQVHQTVDELLSMMFRKINRAXXXXXXXXXXXXXXXXXXXXXXX 614
QHQ C+A+ LS L G+ VH VD LLSMMF+K N+
Sbjct: 735 QHQECMASILSELKTGSPVHHIVDSLLSMMFKKANKGGSQSLTPSSGSSSLSTSGGDDSS 794
Query: 615 LRPKLPAWDILEAVPFVVDAALTGCAHGRLSPRELATGLKDLADFLPASLATIVSYFSAE 674
+ KLPAWDILEA PFV+DAALT CAHG LSPRELATGLK LADFLPA+L T+VSYFS+E
Sbjct: 795 DQLKLPAWDILEAAPFVLDAALTACAHGSLSPRELATGLKILADFLPATLGTMVSYFSSE 854
Query: 675 VSRGVWKPAFMNGMDWPSPATNLTNVEEHIKKILATTGIDIPSLAAGGXXXXXXXXXXXX 734
V+RG+WKP MNG DWPSPA NL +VE+ I+KILA TG+D+P L A G
Sbjct: 855 VTRGLWKPVSMNGTDWPSPAANLASVEQQIEKILAATGVDVPRLPADGISAATLPLPLAA 914
Query: 735 XXXXXITYKIDKASERFLNLAGPALESLAAGCPWPCMPIVASLWTQKAKRWFDFLVFSAS 794
ITYK+DKA+ERFL L GPAL+SLAA CPWPCMPIV SLWTQK KRW DFL+FSAS
Sbjct: 915 LVSLTITYKLDKATERFLVLVGPALDSLAAACPWPCMPIVTSLWTQKVKRWSDFLIFSAS 974
Query: 795 RTVFLHNSDAVVQLLKSCFTATLGLN-SNPISSNVGVGALLGHGFGSHFCGGISPVAPGI 853
RTVF HN DAV+QLL+SCFT TLGL ++ + S GVGALLGHGFGS + GGIS APGI
Sbjct: 975 RTVFHHNRDAVIQLLRSCFTCTLGLTPTSQLCSYGGVGALLGHGFGSRYSGGISTAAPGI 1034
Query: 854 LYLRVYRSMRDILFITEEIVSLLMHSVREIAFSGLPQEKMEKLKASKNGMRYG--QVSLA 911
LY++V+RS+RD++F+TEEI+SLLM SV+ IA LP + EKLK +K+G RYG QVSL+
Sbjct: 1035 LYIKVHRSIRDVMFLTEEILSLLMFSVKSIATRELPAGQAEKLKKTKDGSRYGIGQVSLS 1094
Query: 912 AAITRVKLAASLGASLVWLSGGLGSVHSLIYETLPSWFISVHKSEHKYSDGLVSMLGGYA 971
A+ RVKLAASLGASLVW+SGGL V +LI ETLPSWFISVH E + G+V ML GYA
Sbjct: 1095 LAMRRVKLAASLGASLVWISGGLNLVQALIKETLPSWFISVHGEEDELG-GMVPMLRGYA 1153
Query: 972 LAYFAVLCGALAWGVDSSSLASKRRPKILGFHMEFLASALDGKISLGCDSATWHAYVSGF 1031
LAYFA+L A AWGVDSS ASKRRP++L H+EF+ SAL+GKISLGCD ATW AYV+GF
Sbjct: 1154 LAYFAILSSAFAWGVDSSYPASKRRPRVLWLHLEFMVSALEGKISLGCDWATWQAYVTGF 1213
Query: 1032 MSLMVSCTPTWVLEVDVEVLKRLSKGLKQWNEEEXXXXXXXXXXXXXXXXXXELIIE 1088
+SLMV CTP WVLEVDVEV+KRLSK L+QWNE++ ELI+E
Sbjct: 1214 VSLMVQCTPAWVLEVDVEVIKRLSKSLRQWNEQDLALALLCAGGLGTMGAATELIVE 1270
Score = 280 (103.6 bits), Expect = 3.9e-311, Sum P(3) = 3.9e-311
Identities = 58/126 (46%), Positives = 79/126 (62%)
Query: 143 LRLVQRERDPIEGPMPRLDPRLCMLFSVTTLLIADLIDEEESAPNDETECGFTYPWKEKK 202
L ++ ERDPIEGP+PR D LC+L SVT L +A++I+EEES D+T + WKEKK
Sbjct: 345 LEILSEERDPIEGPVPRTDTFLCVLLSVTPLAVANIIEEEESQWIDQTSSSPSNQWKEKK 404
Query: 203 VPGKRRNDLVSSLQVLGDYQGLLTPPQSVVSXXXXXXXXXMLFVSGIDVGSAYFECINMK 262
GK R L++SLQ LGDY+ LLTPP+SV S ++F+SGI + +E +M
Sbjct: 405 --GKCRQGLINSLQQLGDYESLLTPPRSVQSVANQAAAKAIMFISGITNSNGSYENTSMS 462
Query: 263 DMPVNC 268
+ C
Sbjct: 463 ESASGC 468
Score = 242 (90.2 bits), Expect = 3.9e-311, Sum P(3) = 3.9e-311
Identities = 61/130 (46%), Positives = 81/130 (62%)
Query: 28 NSSAL-KSSTILTPE---DLLQ--LTSDT-HLGL-SQECKTSPQPKFDAVLAFGSLASSA 79
N AL K++T + E + LQ +TS HL + E KT P+ +F A+++ GS +
Sbjct: 209 NHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNMESKTIPRGEFHAIVSSGSKLALT 268
Query: 80 GLCHGASRSALWLPLDLVLEDALDGYQVNATSAIEIITSLIKTLQAINGTTWHETFLGLW 139
S SALWLP+DL ED +DG Q A SA+E +T L+K LQA N T+WH+ FL LW
Sbjct: 269 ------SDSALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSWHDAFLALW 322
Query: 140 IAALRLVQRE 149
+AALRLVQRE
Sbjct: 323 LAALRLVQRE 332
Score = 41 (19.5 bits), Expect = 5.4e-39, Sum P(3) = 5.4e-39
Identities = 21/75 (28%), Positives = 31/75 (41%)
Query: 265 PVNCSGNLRHLIVEACIARNLLDTSAYFWPGYVNGHINQIPNTVPAQVPGWSSFTKGAP- 323
P + SG+ HLI A LL + ++ +P A +P +F G P
Sbjct: 573 PADLSGSYSHLINSAPFLNVLLVGISPIDCVHIFSLHGVVPLLAGALMPICEAFGSGVPN 632
Query: 324 LT-PLMVNALVSSPA 337
+T L L+SS A
Sbjct: 633 ITWTLPTGELISSHA 647
Score = 39 (18.8 bits), Expect = 8.7e-39, Sum P(3) = 8.7e-39
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 293 WPGYVNGHINQIPNTVPAQV 312
W YV G ++ + PA V
Sbjct: 1206 WQAYVTGFVSLMVQCTPAWV 1225
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1091 1016 0.00080 123 3 11 22 0.37 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 633 (67 KB)
Total size of DFA: 492 KB (2227 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 77.81u 0.08s 77.89t Elapsed: 00:00:03
Total cpu time: 77.81u 0.08s 77.89t Elapsed: 00:00:03
Start: Tue May 21 14:33:40 2013 End: Tue May 21 14:33:43 2013